BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046461
(383 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 113/221 (51%), Gaps = 30/221 (13%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQA---------KHCIIACGTARGITF 232
+N+++L G+C ++L+VY YM GS+ LR + K IA G+ARG+ +
Sbjct: 95 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAY 154
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL--- 289
LH P IIHRD+ A+NILL+E+FE V DFGL +L+ + H V GTIG+I
Sbjct: 155 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEY 214
Query: 290 LACGG-----DIYSFSVVLLELVIRKQPTG-PEFKDKNGGNLVDWV------------LD 331
L+ G D++ + V+LLEL+ ++ + + L+DWV +D
Sbjct: 215 LSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVD 274
Query: 332 STILNAYSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
+ Y + +++Q+ + C +P RP M V LE
Sbjct: 275 VDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 115/232 (49%), Gaps = 30/232 (12%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQA---------KHCIIACGTARGITF 232
+N+++L G+C ++L+VY YM GS+ LR + K IA G+ARG+ +
Sbjct: 87 RNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAY 146
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL--- 289
LH P IIHRD+ A+NILL+E+FE V DFGL +L+ + H V G IG+I
Sbjct: 147 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEY 206
Query: 290 LACGG-----DIYSFSVVLLELVIRKQPTG-PEFKDKNGGNLVDWV------------LD 331
L+ G D++ + V+LLEL+ ++ + + L+DWV +D
Sbjct: 207 LSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVD 266
Query: 332 STILNAYSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLEKYHTGENFGRY 383
+ Y + +++Q+ + C +P RP M V LE E + +
Sbjct: 267 VDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEEW 318
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 104/220 (47%), Gaps = 34/220 (15%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR--------NQAKHCIIACGTARGITFL 233
+N+V+LLG+ G+ +VY YM GSL D L + C IA G A GI FL
Sbjct: 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 149
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD-CESHTSTDVAGTIGYIL--- 289
H + H IHRDI ++NILL+E F K+SDFGL R ++ + + GT Y+
Sbjct: 150 H---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEA 206
Query: 290 ----LACGGDIYSFSVVLLELVIRKQPTGPEFKDKN------------GGNLVDWVLDST 333
+ DIYSF VVLLE +I P E ++ + D++
Sbjct: 207 LRGEITPKSDIYSFGVVLLE-IITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYI--DK 263
Query: 334 ILNAYSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+N S+ M + C+ + RP + +VQ+ L++
Sbjct: 264 KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 103/220 (46%), Gaps = 34/220 (15%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR--------NQAKHCIIACGTARGITFL 233
+N+V+LLG+ G+ +VY YM GSL D L + C IA G A GI FL
Sbjct: 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 149
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD-CESHTSTDVAGTIGYIL--- 289
H + H IHRDI ++NILL+E F K+SDFGL R ++ + GT Y+
Sbjct: 150 H---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEA 206
Query: 290 ----LACGGDIYSFSVVLLELVIRKQPTGPEFKDKN------------GGNLVDWVLDST 333
+ DIYSF VVLLE +I P E ++ + D++
Sbjct: 207 LRGEITPKSDIYSFGVVLLE-IITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYI--DK 263
Query: 334 ILNAYSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+N S+ M + C+ + RP + +VQ+ L++
Sbjct: 264 KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 102/220 (46%), Gaps = 34/220 (15%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR--------NQAKHCIIACGTARGITFL 233
+N+V+LLG+ G+ +VY YM GSL D L + C IA G A GI FL
Sbjct: 84 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 143
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD-CESHTSTDVAGTIGYIL--- 289
H + H IHRDI ++NILL+E F K+SDFGL R + + GT Y+
Sbjct: 144 H---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEA 200
Query: 290 ----LACGGDIYSFSVVLLELVIRKQPTGPEFKDKN------------GGNLVDWVLDST 333
+ DIYSF VVLLE +I P E ++ + D++
Sbjct: 201 LRGEITPKSDIYSFGVVLLE-IITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYI--DK 257
Query: 334 ILNAYSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+N S+ M + C+ + RP + +VQ+ L++
Sbjct: 258 KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 297
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR--------NQAKHCIIACGTARGITFL 233
+N+V+LLG+ G+ +VY Y GSL D L + C IA G A GI FL
Sbjct: 81 ENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFL 140
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD-CESHTSTDVAGTIGYIL--- 289
H + H IHRDI ++NILL+E F K+SDFGL R + + + GT Y
Sbjct: 141 H---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEA 197
Query: 290 ----LACGGDIYSFSVVLLELVIRKQPTGPEFKDKN------------GGNLVDWVLDST 333
+ DIYSF VVLLE +I P E ++ + D++
Sbjct: 198 LRGEITPKSDIYSFGVVLLE-IITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYI--DK 254
Query: 334 ILNAYSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
N S+ + C+ + RP + +VQ+ L++
Sbjct: 255 KXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQE 294
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 105/227 (46%), Gaps = 44/227 (19%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ---------AKHCIIACGTARGITFL 233
++V L+G+C + +++Y+YM G+L L + I G ARG+ +L
Sbjct: 96 HLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL 155
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDC-ESHTSTDVAGTIGYI---- 288
H R IIHRD+ + NILL+E+F K++DFG+ + ++ ++H V GT+GYI
Sbjct: 156 HTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEY 212
Query: 289 ----LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDW------------VLDS 332
L D+YSF VVL E++ + + NL +W ++D
Sbjct: 213 FIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP-REMVNLAEWAVESHNNGQLEQIVDP 271
Query: 333 TILNAYSKPSMLKMLQIVVGCIFDNPTTRPTM----------LRVQE 369
+ + S+ K V C+ + RP+M LR+QE
Sbjct: 272 NLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 105/227 (46%), Gaps = 44/227 (19%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ---------AKHCIIACGTARGITFL 233
++V L+G+C + +++Y+YM G+L L + I G ARG+ +L
Sbjct: 96 HLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL 155
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDC-ESHTSTDVAGTIGYI---- 288
H R IIHRD+ + NILL+E+F K++DFG+ + ++ ++H V GT+GYI
Sbjct: 156 HTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEY 212
Query: 289 ----LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDW------------VLDS 332
L D+YSF VVL E++ + + NL +W ++D
Sbjct: 213 FIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP-REMVNLAEWAVESHNNGQLEQIVDP 271
Query: 333 TILNAYSKPSMLKMLQIVVGCIFDNPTTRPTM----------LRVQE 369
+ + S+ K V C+ + RP+M LR+QE
Sbjct: 272 NLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 99/218 (45%), Gaps = 33/218 (15%)
Query: 179 IAFKNIVQLLGYCPVGEKKL-IVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGI 230
I + +VQL Y V E+ + IV EYM KGSL D+L+ + + +A A G+
Sbjct: 70 IRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGM 127
Query: 231 TFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILL 290
++ + +HRD+ A+NIL+ E+ KV+DFGL RLI D E I +
Sbjct: 128 AYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 184
Query: 291 ACG--------GDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPS 342
D++SF ++L EL + + P ++ VLD + Y P
Sbjct: 185 EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQ-VERGYRMPC 236
Query: 343 MLKMLQ----IVVGCIFDNPTTRPTMLRVQEFLEKYHT 376
+ + ++ C +P RPT +Q FLE Y T
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFT 274
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 33/215 (15%)
Query: 182 KNIVQLLGYCPVGEKKL-IVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFL 233
+ +VQL Y V E+ + IV EYM KGSL D+L+ + + +A A G+ ++
Sbjct: 73 EKLVQL--YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLACG 293
+ +HRD+ A+NIL+ E+ KV+DFGL RLI D E I +
Sbjct: 131 ERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAA 187
Query: 294 --------GDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D++SF ++L EL + + P ++ VLD + Y P +
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQ-VERGYRMPCPPE 239
Query: 346 ----MLQIVVGCIFDNPTTRPTMLRVQEFLEKYHT 376
+ ++ C +P RPT +Q FLE Y T
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFT 274
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 33/215 (15%)
Query: 182 KNIVQLLGYCPVGEKKL-IVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFL 233
+ +VQL Y V E+ + IV EYM KGSL D+L+ + + +A A G+ ++
Sbjct: 63 EKLVQL--YAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 120
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLACG 293
+ +HRD+ A+NIL+ E+ KV+DFGL RLI D E I +
Sbjct: 121 ERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAA 177
Query: 294 --------GDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D++SF ++L EL + + P ++ VLD + Y P +
Sbjct: 178 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQ-VERGYRMPCPPE 229
Query: 346 MLQ----IVVGCIFDNPTTRPTMLRVQEFLEKYHT 376
+ ++ C P RPT +Q FLE Y T
Sbjct: 230 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 264
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 33/215 (15%)
Query: 182 KNIVQLLGYCPVGEKKL-IVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFL 233
+ +VQL Y V E+ + IV EYM KGSL D+L+ + + +A A G+ ++
Sbjct: 73 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLACG 293
+ +HRD+ A+NIL+ E+ KV+DFGL RLI D E I +
Sbjct: 131 ERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 294 --------GDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D++SF ++L EL + + P ++ VLD + Y P +
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQ-VERGYRMPCPPE 239
Query: 346 ----MLQIVVGCIFDNPTTRPTMLRVQEFLEKYHT 376
+ ++ C +P RPT +Q FLE Y T
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFT 274
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 182 KNIVQLLGYCPVGEKKL-IVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFL 233
+ +VQL Y V E+ + IV EYM KGSL D+L+ + + +A A G+ ++
Sbjct: 62 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 119
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLACG 293
+ +HRD+ A+NIL+ E+ KV+DFGL RLI D E I +
Sbjct: 120 ERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 176
Query: 294 --------GDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D++SF ++L EL + + P ++ VLD + Y P +
Sbjct: 177 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQ-VERGYRMPCPPE 228
Query: 346 MLQ----IVVGCIFDNPTTRPTMLRVQEFLEKYHTG 377
+ ++ C +P RPT +Q FLE Y T
Sbjct: 229 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 264
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 33/215 (15%)
Query: 182 KNIVQLLGYCPVGEKKL-IVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFL 233
+ +VQL Y V E+ + IV EYM KGSL D+L+ + + +A A G+ ++
Sbjct: 73 EKLVQL--YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLACG 293
+ +HRD+ A+NIL+ E+ KV+DFGL RLI D E I +
Sbjct: 131 ERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 294 --------GDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D++SF ++L EL + + P ++ VLD + Y P +
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQ-VERGYRMPCPPE 239
Query: 346 MLQ----IVVGCIFDNPTTRPTMLRVQEFLEKYHT 376
+ ++ C +P RPT +Q FLE Y T
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFT 274
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 33/216 (15%)
Query: 182 KNIVQLLGYCPVGEKKL-IVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFL 233
+ +VQL Y V E+ + IV EYM KGSL D+L+ + + +A A G+ ++
Sbjct: 66 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 123
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLACG 293
+ +HRD+ A+NIL+ E+ KV+DFGL RLI D E I +
Sbjct: 124 ERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 180
Query: 294 --------GDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D++SF ++L EL + + P ++ VLD + Y P +
Sbjct: 181 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQ-VERGYRMPCPPE 232
Query: 346 MLQ----IVVGCIFDNPTTRPTMLRVQEFLEKYHTG 377
+ ++ C P RPT +Q FLE Y T
Sbjct: 233 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 268
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 182 KNIVQLLGYCPVGEKKL-IVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFL 233
+ +VQL Y V E+ + IV EYM KGSL D+L+ + + +A A G+ ++
Sbjct: 64 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 121
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLACG 293
+ +HRD+ A+NIL+ E+ KV+DFGL RLI D E I +
Sbjct: 122 ERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 178
Query: 294 --------GDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D++SF ++L EL + + P ++ VLD + Y P +
Sbjct: 179 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQ-VERGYRMPCPPE 230
Query: 346 MLQ----IVVGCIFDNPTTRPTMLRVQEFLEKYHTG 377
+ ++ C +P RPT +Q FLE Y T
Sbjct: 231 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 266
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 33/215 (15%)
Query: 182 KNIVQLLGYCPVGEKKL-IVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFL 233
+ +VQL Y V E+ + IV EYM KGSL D+L+ + + +A A G+ ++
Sbjct: 73 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLACG 293
+ +HRD+ A+NIL+ E+ KV+DFGL RLI D E I +
Sbjct: 131 ERM---NYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 294 --------GDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D++SF ++L EL + + P ++ VLD + Y P +
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQ-VERGYRMPCPPE 239
Query: 346 MLQ----IVVGCIFDNPTTRPTMLRVQEFLEKYHT 376
+ ++ C +P RPT +Q FLE Y T
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFT 274
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 33/215 (15%)
Query: 183 NIVQLLGYCPVGEKKL-IVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFLH 234
+VQL Y V E+ + IV EYM KGSL D+L++ + +A A G+ ++
Sbjct: 65 KLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE 122
Query: 235 HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLACG- 293
+ IHRD+ ++NIL+ K++DFGL RLI D E I +
Sbjct: 123 RM---NYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAAL 179
Query: 294 -------GDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKP----S 342
D++SF ++L ELV + + P ++ VL+ + Y P
Sbjct: 180 YGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE-------VLEQ-VERGYRMPCPQDC 231
Query: 343 MLKMLQIVVGCIFDNPTTRPTMLRVQEFLEKYHTG 377
+ + ++++ C +P RPT +Q FLE Y T
Sbjct: 232 PISLHELMIHCWKKDPEERPTFEYLQSFLEDYFTA 266
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 33/215 (15%)
Query: 182 KNIVQLLGYCPVGEKKL-IVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFL 233
+ +VQL Y V E+ + IV EYM KGSL D+L+ + + +A A G+ ++
Sbjct: 73 EKLVQL--YAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLACG 293
+ +HRD+ A+NIL+ E+ KV+DFGL RLI D E I +
Sbjct: 131 ERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 294 --------GDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D++SF ++L EL + + P ++ VLD + Y P +
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQ-VERGYRMPCPPE 239
Query: 346 MLQ----IVVGCIFDNPTTRPTMLRVQEFLEKYHT 376
+ ++ C +P RPT +Q FLE Y T
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFT 274
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 33/216 (15%)
Query: 182 KNIVQLLGYCPVGEKKL-IVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFL 233
+ +VQL Y V E+ + IV EYM KGSL D+L+ + + +A A G+ ++
Sbjct: 239 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLACG 293
+ +HRD+ A+NIL+ E+ KV+DFGL RLI D E I +
Sbjct: 297 ERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 353
Query: 294 --------GDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D++SF ++L EL + + P ++ VLD + Y P +
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQ-VERGYRMPCPPE 405
Query: 346 ----MLQIVVGCIFDNPTTRPTMLRVQEFLEKYHTG 377
+ ++ C P RPT +Q FLE Y T
Sbjct: 406 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 33/216 (15%)
Query: 182 KNIVQLLGYCPVGEKKL-IVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFL 233
+ +VQL Y V E+ + IV EYM KGSL D+L+ + + +A A G+ ++
Sbjct: 239 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLACG 293
+ +HRD+ A+NIL+ E+ KV+DFGL RLI D E I +
Sbjct: 297 ERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 353
Query: 294 --------GDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D++SF ++L EL + + P ++ VLD + Y P +
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQ-VERGYRMPCPPE 405
Query: 346 ----MLQIVVGCIFDNPTTRPTMLRVQEFLEKYHTG 377
+ ++ C P RPT +Q FLE Y T
Sbjct: 406 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 33/215 (15%)
Query: 182 KNIVQLLGYCPVGEKKL-IVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFL 233
+ +VQL Y V E+ + IV EYM KGSL D+L+ + + +A A G+ ++
Sbjct: 322 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 379
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLACG 293
+ +HRD+ A+NIL+ E+ KV+DFGL RLI D E I +
Sbjct: 380 ERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 436
Query: 294 --------GDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D++SF ++L EL + + P ++ VLD + Y P +
Sbjct: 437 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQ-VERGYRMPCPPE 488
Query: 346 ----MLQIVVGCIFDNPTTRPTMLRVQEFLEKYHT 376
+ ++ C P RPT +Q FLE Y T
Sbjct: 489 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 33/215 (15%)
Query: 182 KNIVQLLGYCPVGEKKL-IVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFL 233
+ +VQL Y V E+ + IV EYM KGSL D+L+ + + +A A G+ ++
Sbjct: 239 EKLVQL--YAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLACG 293
+ +HRD+ A+NIL+ E+ KV+DFGL RLI D E I +
Sbjct: 297 ERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 353
Query: 294 --------GDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D++SF ++L EL + + P ++ VLD + Y P +
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQ-VERGYRMPCPPE 405
Query: 346 ----MLQIVVGCIFDNPTTRPTMLRVQEFLEKYHT 376
+ ++ C P RPT +Q FLE Y T
Sbjct: 406 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 22/206 (10%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR--------NQAKHCIIACGTARGITFLH 234
NIV +G IV EY+ +GSL L ++ + +A A+G+ +LH
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 235 HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLAC-- 292
+R P I+HRD+ + N+L+++ + VKV DFGL RL + S AGT ++
Sbjct: 155 NR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKA-SXFLXSKXAAGTPEWMAPEVLR 212
Query: 293 ------GGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKM 346
D+YSF V+L EL +QP G + N +V V + ++
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQPWG----NLNPAQVVAAVGFKCKRLEIPRNLNPQV 268
Query: 347 LQIVVGCIFDNPTTRPTMLRVQEFLE 372
I+ GC + P RP+ + + L
Sbjct: 269 AAIIEGCWTNEPWKRPSFATIMDLLR 294
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 97/215 (45%), Gaps = 33/215 (15%)
Query: 182 KNIVQLLGYCPVGEKKL-IVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFL 233
+ +VQL Y V E+ + IV EYM KGSL D+L+ + + ++ A G+ ++
Sbjct: 70 EKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYV 127
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLACG 293
+ +HRD+ A+NIL+ E+ KV+DFGL RLI D E I +
Sbjct: 128 ERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 184
Query: 294 --------GDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D++SF ++L EL + + P ++ VLD + Y P +
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQ-VERGYRMPCPPE 236
Query: 346 MLQ----IVVGCIFDNPTTRPTMLRVQEFLEKYHT 376
+ ++ C P RPT +Q FLE Y T
Sbjct: 237 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 271
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 97/215 (45%), Gaps = 33/215 (15%)
Query: 182 KNIVQLLGYCPVGEKKL-IVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFL 233
+ +VQL Y V E+ + IV EYM KGSL D+L+ + + ++ A G+ ++
Sbjct: 70 EKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYV 127
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLACG 293
+ +HRD+ A+NIL+ E+ KV+DFGL RLI D E I +
Sbjct: 128 ERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAA 184
Query: 294 --------GDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D++SF ++L EL + + P ++ VLD + Y P +
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQ-VERGYRMPCPPE 236
Query: 346 MLQ----IVVGCIFDNPTTRPTMLRVQEFLEKYHT 376
+ ++ C P RPT +Q FLE Y T
Sbjct: 237 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 271
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 97/215 (45%), Gaps = 33/215 (15%)
Query: 182 KNIVQLLGYCPVGEKKL-IVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFL 233
+ +VQL Y V E+ + IV EYM KG L D+L+ + + +A A G+ ++
Sbjct: 73 EKLVQL--YAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLACG 293
+ +HRD+ A+NIL+ E+ KV+DFGL RLI D E I +
Sbjct: 131 ERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 294 --------GDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D++SF ++L EL + + P ++ VLD + Y P +
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQ-VERGYRMPCPPE 239
Query: 346 MLQ----IVVGCIFDNPTTRPTMLRVQEFLEKYHT 376
+ ++ C +P RPT +Q FLE Y T
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFT 274
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 97/215 (45%), Gaps = 33/215 (15%)
Query: 182 KNIVQLLGYCPVGEKKL-IVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFL 233
+ +VQL Y V E+ + IV EYM KG L D+L+ + + +A A G+ ++
Sbjct: 73 EKLVQL--YAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLACG 293
+ +HRD+ A+NIL+ E+ KV+DFGL RLI D E I +
Sbjct: 131 ERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 187
Query: 294 --------GDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D++SF ++L EL + + P ++ VLD + Y P +
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQ-VERGYRMPCPPE 239
Query: 346 MLQ----IVVGCIFDNPTTRPTMLRVQEFLEKYHT 376
+ ++ C +P RPT +Q FLE Y T
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFT 274
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 33/215 (15%)
Query: 182 KNIVQLLGYCPVGEKKL-IVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFL 233
+ +VQL Y V E+ + IV EYM KGSL D+L+ + + +A A G+ ++
Sbjct: 240 EKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 297
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLACG 293
+ +HRD+ A+NIL+ E+ KV+DFGL RLI D E I +
Sbjct: 298 ERM---NYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAA 354
Query: 294 --------GDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D++SF ++L EL + + P ++ VLD + Y P +
Sbjct: 355 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-------VLDQ-VERGYRMPCPPE 406
Query: 346 ----MLQIVVGCIFDNPTTRPTMLRVQEFLEKYHT 376
+ ++ C +P RPT +Q FLE Y T
Sbjct: 407 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFT 441
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 22/206 (10%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR--------NQAKHCIIACGTARGITFLH 234
NIV +G IV EY+ +GSL L ++ + +A A+G+ +LH
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 235 HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLAC-- 292
+R P I+HR++ + N+L+++ + VKV DFGL RL + +S AGT ++
Sbjct: 155 NR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST-FLSSKSAAGTPEWMAPEVLR 212
Query: 293 ------GGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKM 346
D+YSF V+L EL +QP G + N +V V + ++
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQPWG----NLNPAQVVAAVGFKCKRLEIPRNLNPQV 268
Query: 347 LQIVVGCIFDNPTTRPTMLRVQEFLE 372
I+ GC + P RP+ + + L
Sbjct: 269 AAIIEGCWTNEPWKRPSFATIMDLLR 294
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 160 VAGTNKFYEKNVIRGDDFGIAFKNIVQLLGYCPVGE-KKLIVYEYMVKGSLNDWLRNQAK 218
+ ++F + +I D + N++ LLG C E L+V YM G L +++RN+
Sbjct: 77 IGEVSQFLTEGIIMKD---FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 133
Query: 219 HCII------ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD 272
+ + A+G+ FL + +HRD+ A N +L+E F VKV+DFGL R + D
Sbjct: 134 NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 190
Query: 273 CE---SHTSTDVAGTIGYILL--------ACGGDIYSFSVVLLELVIRKQPTGPE 316
E H T + ++ L D++SF V+L EL+ R P P+
Sbjct: 191 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 245
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 160 VAGTNKFYEKNVIRGDDFGIAFKNIVQLLGYCPVGE-KKLIVYEYMVKGSLNDWLRNQAK 218
+ ++F + +I D + N++ LLG C E L+V YM G L +++RN+
Sbjct: 131 IGEVSQFLTEGIIMKD---FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 187
Query: 219 HCII------ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD 272
+ + A+G+ FL + +HRD+ A N +L+E F VKV+DFGL R + D
Sbjct: 188 NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 244
Query: 273 CE---SHTSTDVAGTIGYILL--------ACGGDIYSFSVVLLELVIRKQPTGPE 316
E H T + ++ L D++SF V+L EL+ R P P+
Sbjct: 245 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 299
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 160 VAGTNKFYEKNVIRGDDFGIAFKNIVQLLGYCPVGE-KKLIVYEYMVKGSLNDWLRNQAK 218
+ ++F + +I D + N++ LLG C E L+V YM G L +++RN+
Sbjct: 73 IGEVSQFLTEGIIMKD---FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 129
Query: 219 HCII------ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD 272
+ + A+G+ FL + +HRD+ A N +L+E F VKV+DFGL R + D
Sbjct: 130 NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 186
Query: 273 CE---SHTSTDVAGTIGYILL--------ACGGDIYSFSVVLLELVIRKQPTGPE 316
E H T + ++ L D++SF V+L EL+ R P P+
Sbjct: 187 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 241
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 160 VAGTNKFYEKNVIRGDDFGIAFKNIVQLLGYCPVGE-KKLIVYEYMVKGSLNDWLRNQAK 218
+ ++F + +I D + N++ LLG C E L+V YM G L +++RN+
Sbjct: 72 IGEVSQFLTEGIIMKD---FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 128
Query: 219 HCII------ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD 272
+ + A+G+ FL + +HRD+ A N +L+E F VKV+DFGL R + D
Sbjct: 129 NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
Query: 273 CE---SHTSTDVAGTIGYILL--------ACGGDIYSFSVVLLELVIRKQPTGPE 316
E H T + ++ L D++SF V+L EL+ R P P+
Sbjct: 186 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 240
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 160 VAGTNKFYEKNVIRGDDFGIAFKNIVQLLGYCPVGE-KKLIVYEYMVKGSLNDWLRNQAK 218
+ ++F + +I D + N++ LLG C E L+V YM G L +++RN+
Sbjct: 72 IGEVSQFLTEGIIMKD---FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 128
Query: 219 HCII------ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD 272
+ + A+G+ FL + +HRD+ A N +L+E F VKV+DFGL R + D
Sbjct: 129 NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
Query: 273 CE---SHTSTDVAGTIGYILL--------ACGGDIYSFSVVLLELVIRKQPTGPE 316
E H T + ++ L D++SF V+L EL+ R P P+
Sbjct: 186 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 240
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 160 VAGTNKFYEKNVIRGDDFGIAFKNIVQLLGYCPVGE-KKLIVYEYMVKGSLNDWLRNQAK 218
+ ++F + +I D + N++ LLG C E L+V YM G L +++RN+
Sbjct: 70 IGEVSQFLTEGIIMKD---FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 126
Query: 219 HCII------ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD 272
+ + A+G+ FL + +HRD+ A N +L+E F VKV+DFGL R + D
Sbjct: 127 NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 183
Query: 273 CE---SHTSTDVAGTIGYILL--------ACGGDIYSFSVVLLELVIRKQPTGPE 316
E H T + ++ L D++SF V+L EL+ R P P+
Sbjct: 184 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 238
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 160 VAGTNKFYEKNVIRGDDFGIAFKNIVQLLGYCPVGE-KKLIVYEYMVKGSLNDWLRNQAK 218
+ ++F + +I D + N++ LLG C E L+V YM G L +++RN+
Sbjct: 71 IGEVSQFLTEGIIMKD---FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 127
Query: 219 HCII------ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD 272
+ + A+G+ +L + +HRD+ A N +L+E F VKV+DFGL R + D
Sbjct: 128 NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 184
Query: 273 CES---HTSTDVAGTIGYILL--------ACGGDIYSFSVVLLELVIRKQPTGPE 316
E H T + ++ L D++SF V+L EL+ R P P+
Sbjct: 185 KEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 239
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 160 VAGTNKFYEKNVIRGDDFGIAFKNIVQLLGYCPVGE-KKLIVYEYMVKGSLNDWLRNQAK 218
+ ++F + +I D + N++ LLG C E L+V YM G L +++RN+
Sbjct: 73 IGEVSQFLTEGIIMKD---FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 129
Query: 219 HCII------ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD 272
+ + A+G+ FL + +HRD+ A N +L+E F VKV+DFGL R + D
Sbjct: 130 NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLD 186
Query: 273 CE---SHTSTDVAGTIGYILL--------ACGGDIYSFSVVLLELVIRKQPTGPE 316
E H T + ++ L D++SF V+L EL+ R P P+
Sbjct: 187 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 241
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 160 VAGTNKFYEKNVIRGDDFGIAFKNIVQLLGYCPVGE-KKLIVYEYMVKGSLNDWLRNQAK 218
+ ++F + +I D + N++ LLG C E L+V YM G L +++RN+
Sbjct: 91 IGEVSQFLTEGIIMKD---FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 147
Query: 219 HCII------ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD 272
+ + A+G+ +L + +HRD+ A N +L+E F VKV+DFGL R + D
Sbjct: 148 NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 204
Query: 273 CES---HTSTDVAGTIGYILL--------ACGGDIYSFSVVLLELVIRKQPTGPE 316
E H T + ++ L D++SF V+L EL+ R P P+
Sbjct: 205 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 259
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 160 VAGTNKFYEKNVIRGDDFGIAFKNIVQLLGYCPVGE-KKLIVYEYMVKGSLNDWLRNQAK 218
+ ++F + +I D + N++ LLG C E L+V YM G L +++RN+
Sbjct: 90 IGEVSQFLTEGIIMKD---FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 146
Query: 219 HCII------ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD 272
+ + A+G+ +L + +HRD+ A N +L+E F VKV+DFGL R + D
Sbjct: 147 NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 203
Query: 273 CES---HTSTDVAGTIGYILL--------ACGGDIYSFSVVLLELVIRKQPTGPE 316
E H T + ++ L D++SF V+L EL+ R P P+
Sbjct: 204 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 258
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 160 VAGTNKFYEKNVIRGDDFGIAFKNIVQLLGYCPVGE-KKLIVYEYMVKGSLNDWLRNQAK 218
+ ++F + +I D + N++ LLG C E L+V YM G L +++RN+
Sbjct: 69 IGEVSQFLTEGIIMKD---FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 125
Query: 219 HCII------ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD 272
+ + A+G+ +L + +HRD+ A N +L+E F VKV+DFGL R + D
Sbjct: 126 NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 182
Query: 273 CES---HTSTDVAGTIGYILL--------ACGGDIYSFSVVLLELVIRKQPTGPE 316
E H T + ++ L D++SF V+L EL+ R P P+
Sbjct: 183 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 237
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 160 VAGTNKFYEKNVIRGDDFGIAFKNIVQLLGYCPVGE-KKLIVYEYMVKGSLNDWLRNQAK 218
+ ++F + +I D + N++ LLG C E L+V YM G L +++RN+
Sbjct: 64 IGEVSQFLTEGIIMKD---FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 120
Query: 219 HCII------ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD 272
+ + A+G+ +L + +HRD+ A N +L+E F VKV+DFGL R + D
Sbjct: 121 NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 177
Query: 273 CES---HTSTDVAGTIGYILL--------ACGGDIYSFSVVLLELVIRKQPTGPE 316
E H T + ++ L D++SF V+L EL+ R P P+
Sbjct: 178 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 232
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 160 VAGTNKFYEKNVIRGDDFGIAFKNIVQLLGYCPVGE-KKLIVYEYMVKGSLNDWLRNQAK 218
+ ++F + +I D + N++ LLG C E L+V YM G L +++RN+
Sbjct: 72 IGEVSQFLTEGIIMKD---FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 128
Query: 219 HCII------ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD 272
+ + A+G+ +L + +HRD+ A N +L+E F VKV+DFGL R + D
Sbjct: 129 NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
Query: 273 CES---HTSTDVAGTIGYILL--------ACGGDIYSFSVVLLELVIRKQPTGPE 316
E H T + ++ L D++SF V+L EL+ R P P+
Sbjct: 186 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 240
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 160 VAGTNKFYEKNVIRGDDFGIAFKNIVQLLGYCPVGE-KKLIVYEYMVKGSLNDWLRNQAK 218
+ ++F + +I D + N++ LLG C E L+V YM G L +++RN+
Sbjct: 72 IGEVSQFLTEGIIMKD---FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 128
Query: 219 HCII------ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD 272
+ + A+G+ +L + +HRD+ A N +L+E F VKV+DFGL R + D
Sbjct: 129 NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
Query: 273 CES---HTSTDVAGTIGYILL--------ACGGDIYSFSVVLLELVIRKQPTGPE 316
E H T + ++ L D++SF V+L EL+ R P P+
Sbjct: 186 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 240
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 160 VAGTNKFYEKNVIRGDDFGIAFKNIVQLLGYCPVGE-KKLIVYEYMVKGSLNDWLRNQAK 218
+ ++F + +I D + N++ LLG C E L+V YM G L +++RN+
Sbjct: 71 IGEVSQFLTEGIIMKD---FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 127
Query: 219 HCII------ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD 272
+ + A+G+ +L + +HRD+ A N +L+E F VKV+DFGL R + D
Sbjct: 128 NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 184
Query: 273 CES---HTSTDVAGTIGYILL--------ACGGDIYSFSVVLLELVIRKQPTGPE 316
E H T + ++ L D++SF V+L EL+ R P P+
Sbjct: 185 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 239
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 160 VAGTNKFYEKNVIRGDDFGIAFKNIVQLLGYCPVGE-KKLIVYEYMVKGSLNDWLRNQAK 218
+ ++F + +I D + N++ LLG C E L+V YM G L +++RN+
Sbjct: 67 IGEVSQFLTEGIIMKD---FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 123
Query: 219 HCII------ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD 272
+ + A+G+ +L + +HRD+ A N +L+E F VKV+DFGL R + D
Sbjct: 124 NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180
Query: 273 CES---HTSTDVAGTIGYILL--------ACGGDIYSFSVVLLELVIRKQPTGPE 316
E H T + ++ L D++SF V+L EL+ R P P+
Sbjct: 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 235
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 160 VAGTNKFYEKNVIRGDDFGIAFKNIVQLLGYCPVGE-KKLIVYEYMVKGSLNDWLRNQAK 218
+ ++F + +I D + N++ LLG C E L+V YM G L +++RN+
Sbjct: 70 IGEVSQFLTEGIIMKD---FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH 126
Query: 219 HCII------ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD 272
+ + A+G+ +L + +HRD+ A N +L+E F VKV+DFGL R + D
Sbjct: 127 NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 183
Query: 273 CES---HTSTDVAGTIGYILL--------ACGGDIYSFSVVLLELVIRKQPTGPE 316
E H T + ++ L D++SF V+L EL+ R P P+
Sbjct: 184 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 238
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIA--CGTARGI-TFLHHRFQP 239
NI++L G G +IV EYM GSL+ +LR I G RG+ + +
Sbjct: 111 NIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL 170
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGYIL 289
+HRD+ A N+L++ + KVSDFGL R++ D T G I +
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRT 230
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML----K 345
+ D++SF VV+ E++ + ++ N+ + + S++ Y P+ +
Sbjct: 231 FSSASDVWSFGVVMWEVLA--------YGERPYWNMTNRDVISSVEEGYRLPAPMGCPHA 282
Query: 346 MLQIVVGCIFDNPTTRPTMLRVQEFLE 372
+ Q+++ C + RP ++ L+
Sbjct: 283 LHQLMLDCWHKDRAQRPRFSQIVSVLD 309
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIA--CGTARGI-TFLHHRFQP 239
NI++L G G +IV EYM GSL+ +LR I G RG+ + +
Sbjct: 111 NIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL 170
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGYIL 289
+HRD+ A N+L++ + KVSDFGL R++ D T G I +
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT 230
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML----K 345
+ D++SF VV+ E++ + ++ N+ + + S++ Y P+ +
Sbjct: 231 FSSASDVWSFGVVMWEVLA--------YGERPYWNMTNRDVISSVEEGYRLPAPMGCPHA 282
Query: 346 MLQIVVGCIFDNPTTRPTMLRVQEFLE 372
+ Q+++ C + RP ++ L+
Sbjct: 283 LHQLMLDCWHKDRAQRPRFSQIVSVLD 309
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 23/200 (11%)
Query: 199 IVYEYMVKGSLNDWLRNQA-------KHCIIACGTARGITFLHHRFQPHIIHRDINASNI 251
I+ EYM GSL D+L+ + K +A A G+ F+ R + IHRD+ A+NI
Sbjct: 84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 140
Query: 252 LLNEDFEVKVSDFGLVRLISDCESHTST--------DVAGTIGYILLACGGDIYSFSVVL 303
L+++ K++DFGL RLI D E I Y D++SF ++L
Sbjct: 141 LVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 304 LELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRPT 363
E+V + P N + + ++ + P ++ Q++ C + P RPT
Sbjct: 201 TEIVTHGRIPYPGM--TNPEVIQNLERGYRMVRPDNCPE--ELYQLMRLCWKERPEDRPT 256
Query: 364 MLRVQEFLEKYHTGENFGRY 383
++ LE + T G+Y
Sbjct: 257 FDYLRSVLEDFFTATE-GQY 275
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 25/208 (12%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-NQAKHCIIA-CGTARGI-TFLHHRFQP 239
NI++L G + +IV EYM GSL+ +LR + A+ +I G RGI + + +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGYIL 289
+HRD+ A NIL+N + KVSDFGL R++ D T G I Y
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML----K 345
D++S+ +VL E++ + E +++ VD Y P +
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD--------EGYRLPPPMDCPAA 278
Query: 346 MLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+ Q+++ C + RP ++ L+K
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 25/201 (12%)
Query: 199 IVYEYMVKGSLNDWLRNQA-------KHCIIACGTARGITFLHHRFQPHIIHRDINASNI 251
I+ EYM GSL D+L+ + K +A A G+ F+ R + IHRD+ A+NI
Sbjct: 94 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 150
Query: 252 LLNEDFEVKVSDFGLVRLISDCESHTSTDVAG---------TIGYILLACGGDIYSFSVV 302
L+++ K++DFGL RLI D E +T+ + A I Y D++SF ++
Sbjct: 151 LVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 209
Query: 303 LLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRP 362
L E+V + P N + + ++ + P ++ Q++ C + P RP
Sbjct: 210 LTEIVTHGRIPYPGM--TNPEVIQNLERGYRMVRPDNCPE--ELYQLMRLCWKERPEDRP 265
Query: 363 TMLRVQEFLEKYHTGENFGRY 383
T ++ LE + T G+Y
Sbjct: 266 TFDYLRSVLEDFFTATE-GQY 285
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 47/230 (20%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI--------------------- 221
NIV+LLG C VG+ +++EYM G LN++LR+ + H +
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170
Query: 222 --------IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDC 273
IA A G+ +L R +HRD+ N L+ E+ VK++DFGL R I
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 274 ESHTSTD---------VAGTIGYILLACGGDIYSFSVVLLELVIRK-QPTGPEFKDKNGG 323
+ + + +I Y D++++ VVL E+ QP +
Sbjct: 228 DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP----YYGMAHE 283
Query: 324 NLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
++ +V D IL A + L++ ++ C P RP+ + L++
Sbjct: 284 EVIYYVRDGNIL-ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQR 332
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 24/195 (12%)
Query: 199 IVYEYMVKGSLNDWLRNQA-------KHCIIACGTARGITFLHHRFQPHIIHRDINASNI 251
I+ EYM GSL D+L+ + K +A A G+ F+ R + IHRD+ A+NI
Sbjct: 79 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 135
Query: 252 LLNEDFEVKVSDFGLVRLISDCESHTSTDVAG---------TIGYILLACGGDIYSFSVV 302
L+++ K++DFGL RLI D E +T+ + A I Y D++SF ++
Sbjct: 136 LVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 194
Query: 303 LLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRP 362
L E+V + P N + + ++ + P ++ Q++ C + P RP
Sbjct: 195 LTEIVTHGRIPYPGM--TNPEVIQNLERGYRMVRPDNCPE--ELYQLMRLCWKERPEDRP 250
Query: 363 TMLRVQEFLEKYHTG 377
T ++ LE + T
Sbjct: 251 TFDYLRSVLEDFFTA 265
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 24/195 (12%)
Query: 199 IVYEYMVKGSLNDWLRNQA-------KHCIIACGTARGITFLHHRFQPHIIHRDINASNI 251
I+ EYM GSL D+L+ + K +A A G+ F+ R + IHRD+ A+NI
Sbjct: 90 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 146
Query: 252 LLNEDFEVKVSDFGLVRLISDCESHTSTDVAG---------TIGYILLACGGDIYSFSVV 302
L+++ K++DFGL RLI D E +T+ + A I Y D++SF ++
Sbjct: 147 LVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 205
Query: 303 LLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRP 362
L E+V + P N + + ++ + P ++ Q++ C + P RP
Sbjct: 206 LTEIVTHGRIPYPGM--TNPEVIQNLERGYRMVRPDNCPE--ELYQLMRLCWKERPEDRP 261
Query: 363 TMLRVQEFLEKYHTG 377
T ++ LE + T
Sbjct: 262 TFDYLRSVLEDFFTA 276
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 24/195 (12%)
Query: 199 IVYEYMVKGSLNDWLRNQA-------KHCIIACGTARGITFLHHRFQPHIIHRDINASNI 251
I+ EYM GSL D+L+ + K +A A G+ F+ R + IHRD+ A+NI
Sbjct: 89 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 145
Query: 252 LLNEDFEVKVSDFGLVRLISDCESHTSTDVAG---------TIGYILLACGGDIYSFSVV 302
L+++ K++DFGL RLI D E +T+ + A I Y D++SF ++
Sbjct: 146 LVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 204
Query: 303 LLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRP 362
L E+V + P N + + ++ + P ++ Q++ C + P RP
Sbjct: 205 LTEIVTHGRIPYPGM--TNPEVIQNLERGYRMVRPDNCPE--ELYQLMRLCWKERPEDRP 260
Query: 363 TMLRVQEFLEKYHTG 377
T ++ LE + T
Sbjct: 261 TFDYLRSVLEDFFTA 275
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 25/208 (12%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-NQAKHCIIA-CGTARGI-TFLHHRFQP 239
NI++L G + +IV EYM GSL+ +LR + A+ +I G RGI + + +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGYIL 289
+HRD+ A NIL+N + KVSDFGL R++ D T G I Y
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML----K 345
D++S+ +VL E++ + E +++ VD Y P +
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD--------EGYRLPPPMDCPAA 278
Query: 346 MLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+ Q+++ C + RP ++ L+K
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 38/202 (18%)
Query: 199 IVYEYMVKGSLNDWLRNQA-------KHCIIACGTARGITFLHHRFQPHIIHRDINASNI 251
I+ EYM GSL D+L+ + K +A A G+ F+ R + IHRD+ A+NI
Sbjct: 84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 140
Query: 252 LLNEDFEVKVSDFGLVRLISDCESHTSTDVAG---------TIGYILLACGGDIYSFSVV 302
L+++ K++DFGL RLI D E +T+ + A I Y D++SF ++
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 303 LLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK-------MLQIVVGCIF 355
L E+V + P + I N M++ + Q++ C
Sbjct: 200 LTEIVTHGRIPYPGMTNP-----------EVIQNLERGYRMVRPDNCPEELYQLMRLCWK 248
Query: 356 DNPTTRPTMLRVQEFLEKYHTG 377
+ P RPT ++ LE + T
Sbjct: 249 ERPEDRPTFDYLRSVLEDFFTA 270
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 24/195 (12%)
Query: 199 IVYEYMVKGSLNDWLRNQA-------KHCIIACGTARGITFLHHRFQPHIIHRDINASNI 251
I+ E+M KGSL D+L++ K + A G+ F+ R + IHRD+ A+NI
Sbjct: 259 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANI 315
Query: 252 LLNEDFEVKVSDFGLVRLISDCESHTSTDVAG---------TIGYILLACGGDIYSFSVV 302
L++ K++DFGL R+I D E +T+ + A I + D++SF ++
Sbjct: 316 LVSASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGIL 374
Query: 303 LLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRP 362
L+E+V + P + V L+ + ++ I++ C + P RP
Sbjct: 375 LMEIVTYGRIPYPGMSNPE----VIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERP 430
Query: 363 TMLRVQEFLEKYHTG 377
T +Q L+ ++T
Sbjct: 431 TFEYIQSVLDDFYTA 445
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 25/208 (12%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-NQAKHCIIA-CGTARGI-TFLHHRFQP 239
NI++L G + +IV EYM GSL+ +LR + A+ +I G RGI + + +
Sbjct: 95 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 154
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGYIL 289
+HRD+ A NIL+N + KVSDFGL R++ D T G I Y
Sbjct: 155 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 214
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML----K 345
D++S+ +VL E++ + E +++ VD Y P +
Sbjct: 215 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD--------EGYRLPPPMDCPAA 266
Query: 346 MLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+ Q+++ C + RP ++ L+K
Sbjct: 267 LYQLMLDCWQKDRNNRPKFEQIVSILDK 294
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 25/208 (12%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-NQAKHCIIA-CGTARGI-TFLHHRFQP 239
NI++L G + +IV EYM GSL+ +LR + A+ +I G RGI + + +
Sbjct: 105 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 164
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGYIL 289
+HRD+ A NIL+N + KVSDFGL R++ D T G I Y
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 224
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML----K 345
D++S+ +VL E++ + E +++ VD Y P +
Sbjct: 225 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD--------EGYRLPPPMDCPAA 276
Query: 346 MLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+ Q+++ C + RP ++ L+K
Sbjct: 277 LYQLMLDCWQKDRNNRPKFEQIVSILDK 304
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-AKHCIIA-CGTARGI-TFLHHRFQP 239
NI++L G + +IV EYM GSL+ +LR A+ +I G RGI + + +
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGYIL 289
+HRD+ A NIL+N + KVSDFGL R++ D T G I Y
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML----K 345
D++S+ +VL E++ + E +++ VD Y P +
Sbjct: 198 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD--------EGYRLPPPMDCPAA 249
Query: 346 MLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+ Q+++ C + RP ++ L+K
Sbjct: 250 LYQLMLDCWQKDRNNRPKFEQIVSILDK 277
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 25/211 (11%)
Query: 183 NIVQLLGYCPVGEKK--LIVYEYMVKGSLNDWLRNQAKH-----CII--ACGTARGITFL 233
N+VQLLG V EK IV EYM KGSL D+LR++ + C++ + + +L
Sbjct: 247 NLVQLLGVI-VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 305
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL---- 289
+ +HRD+ A N+L++ED KVSDFGL + S + V T L
Sbjct: 306 EGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKK 362
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYS--KPSMLKML 347
+ D++SF ++L E+ + P K ++V V ++A P++ ++
Sbjct: 363 FSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVPRVEKGYKMDAPDGCPPAVYDVM 419
Query: 348 QIVVGCIFDNPTTRPTMLRVQEFLEKYHTGE 378
+ C + TRPT L+++E LE T E
Sbjct: 420 K---NCWHLDAATRPTFLQLREQLEHIRTHE 447
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 23/200 (11%)
Query: 199 IVYEYMVKGSLNDWLRNQA-------KHCIIACGTARGITFLHHRFQPHIIHRDINASNI 251
I+ EYM GSL D+L+ + K +A A G+ F+ R + IHRD+ A+NI
Sbjct: 92 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 148
Query: 252 LLNEDFEVKVSDFGLVRLISDCESHTST--------DVAGTIGYILLACGGDIYSFSVVL 303
L+++ K++DFGL RLI D E I Y D++SF ++L
Sbjct: 149 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 208
Query: 304 LELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRPT 363
E+V + P N + + ++ + P ++ Q++ C + P RPT
Sbjct: 209 TEIVTHGRIPYPGM--TNPEVIQNLERGYRMVRPDNCPE--ELYQLMRLCWKERPEDRPT 264
Query: 364 MLRVQEFLEKYHTGENFGRY 383
++ LE + T G+Y
Sbjct: 265 FDYLRSVLEDFFTATE-GQY 283
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 23/200 (11%)
Query: 199 IVYEYMVKGSLNDWLRNQA-------KHCIIACGTARGITFLHHRFQPHIIHRDINASNI 251
I+ EYM GSL D+L+ + K +A A G+ F+ R + IHRD+ A+NI
Sbjct: 84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 140
Query: 252 LLNEDFEVKVSDFGLVRLISDCESHTST--------DVAGTIGYILLACGGDIYSFSVVL 303
L+++ K++DFGL RLI D E I Y D++SF ++L
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 304 LELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRPT 363
E+V + P + V L+ ++ Q++ C + P RPT
Sbjct: 201 TEIVTHGRIPYPGMTNPE----VIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256
Query: 364 MLRVQEFLEKYHTGENFGRY 383
++ LE + T G+Y
Sbjct: 257 FDYLRSVLEDFFTATE-GQY 275
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 23/200 (11%)
Query: 199 IVYEYMVKGSLNDWLRNQA-------KHCIIACGTARGITFLHHRFQPHIIHRDINASNI 251
I+ EYM GSL D+L+ + K +A A G+ F+ R + IHRD+ A+NI
Sbjct: 90 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 146
Query: 252 LLNEDFEVKVSDFGLVRLISDCESHTST--------DVAGTIGYILLACGGDIYSFSVVL 303
L+++ K++DFGL RLI D E I Y D++SF ++L
Sbjct: 147 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 206
Query: 304 LELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRPT 363
E+V + P N + + ++ + P ++ Q++ C + P RPT
Sbjct: 207 TEIVTHGRIPYPGM--TNPEVIQNLERGYRMVRPDNCPE--ELYQLMRLCWKERPEDRPT 262
Query: 364 MLRVQEFLEKYHTGENFGRY 383
++ LE + T G+Y
Sbjct: 263 FDYLRSVLEDFFTATE-GQY 281
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 25/208 (12%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-NQAKHCIIA-CGTARGI-TFLHHRFQP 239
NI++L G + +IV EYM GSL+ +LR + A+ +I G RGI + + +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGYIL 289
+HRD+ A NIL+N + KVSDFGL R++ D T G I Y
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML----K 345
D++S+ +VL E++ + E +++ VD Y P +
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD--------EGYRLPPPMDCPAA 278
Query: 346 MLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+ Q+++ C + RP ++ L+K
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 22/194 (11%)
Query: 199 IVYEYMVKGSLNDWLRNQA-------KHCIIACGTARGITFLHHRFQPHIIHRDINASNI 251
I+ EYM GSL D+L+ + K +A A G+ F+ R + IHRD+ A+NI
Sbjct: 93 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 149
Query: 252 LLNEDFEVKVSDFGLVRLISDCESHTST--------DVAGTIGYILLACGGDIYSFSVVL 303
L+++ K++DFGL RLI D E I Y D++SF ++L
Sbjct: 150 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 209
Query: 304 LELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRPT 363
E+V + P N + + ++ + P ++ Q++ C + P RPT
Sbjct: 210 TEIVTHGRIPYPGM--TNPEVIQNLERGYRMVRPDNCPE--ELYQLMRLCWKERPEDRPT 265
Query: 364 MLRVQEFLEKYHTG 377
++ LE + T
Sbjct: 266 FDYLRSVLEDFFTA 279
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 25/208 (12%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-NQAKHCIIA-CGTARGI-TFLHHRFQP 239
NI++L G + +IV EYM GSL+ +LR + A+ +I G RGI + + +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGYIL 289
+HRD+ A NIL+N + KVSDFGL R++ D T G I Y
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML----K 345
D++S+ +VL E++ + E +++ VD Y P +
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD--------EGYRLPPPMDCPAA 278
Query: 346 MLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+ Q+++ C + RP ++ L+K
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 25/208 (12%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-NQAKHCIIA-CGTARGI-TFLHHRFQP 239
NI++L G + +IV EYM GSL+ +LR + A+ +I G RGI + + +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGYIL 289
+HRD+ A NIL+N + KVSDFGL R++ D T G I Y
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML----K 345
D++S+ +VL E++ + E +++ VD Y P +
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD--------EGYRLPPPMDCPAA 278
Query: 346 MLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+ Q+++ C + RP ++ L+K
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 25/208 (12%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-NQAKHCIIA-CGTARGI-TFLHHRFQP 239
NI++L G + +IV EYM GSL+ +LR + A+ +I G RGI + + +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGYIL 289
+HRD+ A NIL+N + KVSDFGL R++ D T G I Y
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML----K 345
D++S+ +VL E++ + E +++ VD Y P +
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD--------EGYRLPPPMDCPAA 278
Query: 346 MLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+ Q+++ C + RP ++ L+K
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGIT 231
I N+VQLLG C I+ E+M G+L D+LR + + +A + +
Sbjct: 64 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 123
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG-------- 283
+L + + IHRD+ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 124 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT---GDTXTAHAGAKFPIKWT 177
Query: 284 ---TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSK 340
++ Y + D+++F V+L E+ P L++ D +
Sbjct: 178 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE--KDYRMERPEGC 235
Query: 341 PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
P K+ +++ C NP+ RP+ + + E
Sbjct: 236 PE--KVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGIT 231
I N+VQLLG C I+ E+M G+L D+LR + + +A + +
Sbjct: 64 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 123
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG-------- 283
+L + + IHRD+ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 124 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT---GDTXTAHAGAKFPIKWT 177
Query: 284 ---TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSK 340
++ Y + D+++F V+L E+ P L++ D +
Sbjct: 178 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE--KDYRMERPEGC 235
Query: 341 PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
P K+ +++ C NP+ RP+ + + E
Sbjct: 236 PE--KVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 27/206 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITF 232
++ +VQL G C +V+E+M G L+D+LR Q A+ + C G+ +
Sbjct: 59 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY 118
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTI------- 285
L + +IHRD+ A N L+ E+ +KVSDFG+ R + D + +ST +
Sbjct: 119 LE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 175
Query: 286 -GYILLACGGDIYSFSVVLLELVIR-KQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSM 343
+ + D++SF V++ E+ K P +++++ +V+ + ST Y KP +
Sbjct: 176 FSFSRYSSKSDVWSFGVLMWEVFSEGKIP----YENRSNSEVVEDI--STGFRLY-KPRL 228
Query: 344 LK--MLQIVVGCIFDNPTTRPTMLRV 367
+ QI+ C + P RP R+
Sbjct: 229 ASTHVYQIMNHCWKERPEDRPAFSRL 254
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 22/194 (11%)
Query: 199 IVYEYMVKGSLNDWLRNQA-------KHCIIACGTARGITFLHHRFQPHIIHRDINASNI 251
I+ EYM GSL D+L+ + K +A A G+ F+ R + IHRD+ A+NI
Sbjct: 86 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 142
Query: 252 LLNEDFEVKVSDFGLVRLISDCESHTST--------DVAGTIGYILLACGGDIYSFSVVL 303
L+++ K++DFGL RLI D E I Y D++SF ++L
Sbjct: 143 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 202
Query: 304 LELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRPT 363
E+V + P N + + ++ + P ++ Q++ C + P RPT
Sbjct: 203 TEIVTHGRIPYPGM--TNPEVIQNLERGYRMVRPDNCPE--ELYQLMRLCWKERPEDRPT 258
Query: 364 MLRVQEFLEKYHTG 377
++ LE + T
Sbjct: 259 FDYLRSVLEDFFTA 272
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 85/201 (42%), Gaps = 36/201 (17%)
Query: 199 IVYEYMVKGSLNDWLRNQA-------KHCIIACGTARGITFLHHRFQPHIIHRDINASNI 251
I+ EYM GSL D+L+ + K +A A G+ F+ R + IHRD+ A+NI
Sbjct: 84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 140
Query: 252 LLNEDFEVKVSDFGLVRLISDCESHTST--------DVAGTIGYILLACGGDIYSFSVVL 303
L+++ K++DFGL RLI D E I Y D++SF ++L
Sbjct: 141 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 304 LELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK-------MLQIVVGCIFD 356
E+V + P + I N M++ + Q++ C +
Sbjct: 201 TEIVTHGRIPYPGMTNP-----------EVIQNLERGYRMVRPDNCPEELYQLMRLCWKE 249
Query: 357 NPTTRPTMLRVQEFLEKYHTG 377
P RPT ++ LE + T
Sbjct: 250 RPEDRPTFDYLRSVLEDFFTA 270
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 85/201 (42%), Gaps = 36/201 (17%)
Query: 199 IVYEYMVKGSLNDWLRNQA-------KHCIIACGTARGITFLHHRFQPHIIHRDINASNI 251
I+ EYM GSL D+L+ + K +A A G+ F+ R + IHRD+ A+NI
Sbjct: 85 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANI 141
Query: 252 LLNEDFEVKVSDFGLVRLISDCESHTST--------DVAGTIGYILLACGGDIYSFSVVL 303
L+++ K++DFGL RLI D E I Y D++SF ++L
Sbjct: 142 LVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 201
Query: 304 LELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK-------MLQIVVGCIFD 356
E+V + P + I N M++ + Q++ C +
Sbjct: 202 TEIVTHGRIPYPGMTNP-----------EVIQNLERGYRMVRPDNCPEELYQLMRLCWKE 250
Query: 357 NPTTRPTMLRVQEFLEKYHTG 377
P RPT ++ LE + T
Sbjct: 251 RPEDRPTFDYLRSVLEDFFTA 271
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 25/208 (12%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-NQAKHCIIA-CGTARGI-TFLHHRFQP 239
NI++L G + +IV EYM GSL+ +LR + A+ +I G RGI + + +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGYIL 289
+HRD+ A NIL+N + KVSDFGL R++ D T G I Y
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML----K 345
D++S+ +VL E++ + E +++ VD Y P +
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD--------EGYRLPPPMDCPAA 278
Query: 346 MLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+ Q+++ C + RP ++ L+K
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGIT 231
I N+VQLLG C I+ E+M G+L D+LR + + +A + +
Sbjct: 64 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 123
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG-------- 283
+L + + IHRD+ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 124 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT---GDTFTAHAGAKFPIKWT 177
Query: 284 ---TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSK 340
++ Y + D+++F V+L E+ P L++ D +
Sbjct: 178 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE--KDYRMERPEGC 235
Query: 341 PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
P K+ +++ C NP+ RP+ + + E
Sbjct: 236 PE--KVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 27/206 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITF 232
++ +VQL G C +V+E+M G L+D+LR Q A+ + C G+ +
Sbjct: 62 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY 121
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI---- 288
L + +IHRD+ A N L+ E+ +KVSDFG+ R + D + +ST + +
Sbjct: 122 LE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 178
Query: 289 ----LLACGGDIYSFSVVLLELVIR-KQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSM 343
+ D++SF V++ E+ K P +++++ +V+ + ST Y KP +
Sbjct: 179 FSFSRYSSKSDVWSFGVLMWEVFSEGKIP----YENRSNSEVVEDI--STGFRLY-KPRL 231
Query: 344 LK--MLQIVVGCIFDNPTTRPTMLRV 367
+ QI+ C + P RP R+
Sbjct: 232 ASTHVYQIMNHCWRERPEDRPAFSRL 257
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGIT 231
I N+VQLLG C I+ E+M G+L D+LR + + +A + +
Sbjct: 67 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 126
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG-------- 283
+L + + IHRD+ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 127 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAPAGAKFPIKWT 180
Query: 284 ---TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSK 340
++ Y + D+++F V+L E+ P L++ D +
Sbjct: 181 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMERPEGC 238
Query: 341 PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
P K+ +++ C NP+ RP+ + + E
Sbjct: 239 PE--KVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGIT 231
I N+VQLLG C I+ E+M G+L D+LR + + +A + +
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 130
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG-------- 283
+L + + IHRD+ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 131 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT---GDTXTAHAGAKFPIKWT 184
Query: 284 ---TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSK 340
++ Y + D+++F V+L E+ P L++ D +
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMERPEGC 242
Query: 341 PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
P K+ +++ C NP+ RP+ + + E
Sbjct: 243 PE--KVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 27/206 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITF 232
++ +VQL G C +V+E+M G L+D+LR Q A+ + C G+ +
Sbjct: 57 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY 116
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTI------- 285
L + +IHRD+ A N L+ E+ +KVSDFG+ R + D + +ST +
Sbjct: 117 LE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 173
Query: 286 -GYILLACGGDIYSFSVVLLELVIR-KQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSM 343
+ + D++SF V++ E+ K P +++++ +V+ + ST Y KP +
Sbjct: 174 FSFSRYSSKSDVWSFGVLMWEVFSEGKIP----YENRSNSEVVEDI--STGFRLY-KPRL 226
Query: 344 LK--MLQIVVGCIFDNPTTRPTMLRV 367
+ QI+ C + P RP R+
Sbjct: 227 ASTHVYQIMNHCWKERPEDRPAFSRL 252
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGIT 231
I N+VQLLG C I+ E+M G+L D+LR + + +A + +
Sbjct: 68 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 127
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG-------- 283
+L + + IHRD+ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 128 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAPAGAKFPIKWT 181
Query: 284 ---TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSK 340
++ Y + D+++F V+L E+ P L++ D +
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMERPEGC 239
Query: 341 PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
P K+ +++ C NP+ RP+ + + E
Sbjct: 240 PE--KVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 27/206 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITF 232
++ +VQL G C +V+E+M G L+D+LR Q A+ + C G+ +
Sbjct: 59 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY 118
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTI------- 285
L + +IHRD+ A N L+ E+ +KVSDFG+ R + D + +ST +
Sbjct: 119 LE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 175
Query: 286 -GYILLACGGDIYSFSVVLLELVIR-KQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSM 343
+ + D++SF V++ E+ K P +++++ +V+ + ST Y KP +
Sbjct: 176 FSFSRYSSKSDVWSFGVLMWEVFSEGKIP----YENRSNSEVVEDI--STGFRLY-KPRL 228
Query: 344 LK--MLQIVVGCIFDNPTTRPTMLRV 367
+ QI+ C + P RP R+
Sbjct: 229 ASTHVYQIMNHCWKERPEDRPAFSRL 254
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 27/206 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITF 232
++ +VQL G C +V+E+M G L+D+LR Q A+ + C G+ +
Sbjct: 79 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY 138
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTI------- 285
L + +IHRD+ A N L+ E+ +KVSDFG+ R + D + +ST +
Sbjct: 139 LE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 195
Query: 286 -GYILLACGGDIYSFSVVLLELVIR-KQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSM 343
+ + D++SF V++ E+ K P +++++ +V+ + ST Y KP +
Sbjct: 196 FSFSRYSSKSDVWSFGVLMWEVFSEGKIP----YENRSNSEVVEDI--STGFRLY-KPRL 248
Query: 344 LK--MLQIVVGCIFDNPTTRPTMLRV 367
+ QI+ C + P RP R+
Sbjct: 249 ASTHVYQIMNHCWKERPEDRPAFSRL 274
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 22/209 (10%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRN---QAKHCIIACGTARGIT-FLH 234
I N+VQLLG C I+ E+M G+L D+LR Q + ++ A I+ +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 125
Query: 235 HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------- 283
+ + + IHRD+ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 126 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPE 182
Query: 284 TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSM 343
++ Y + D+++F V+L E+ P L++ D + P
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMERPEGCPE- 239
Query: 344 LKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
K+ +++ C NP+ RP+ + + E
Sbjct: 240 -KVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 33/221 (14%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCII-------ACGTARGITFLHH 235
+V+L E I+ EYM KGSL D+L++ ++ + A G+ ++
Sbjct: 69 KLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 128
Query: 236 RFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG---------TIG 286
+ + IHRD+ A+N+L++E K++DFGL R+I D E +T+ + A I
Sbjct: 129 K---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAIN 184
Query: 287 YILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML-- 344
+ D++SF ++L E+V + P G D + + + Y P +
Sbjct: 185 FGCFTIKSDVWSFGILLYEIVTYGKIPYP------GRTNAD--VMTALSQGYRMPRVENC 236
Query: 345 --KMLQIVVGCIFDNPTTRPTMLRVQEFLEKYHTGENFGRY 383
++ I+ C + RPT +Q L+ ++T G+Y
Sbjct: 237 PDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATE-GQY 276
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGIT 231
I N+VQLLG C I+ E+M G+L D+LR + + +A + +
Sbjct: 67 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 126
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG-------- 283
+L + + IHRD+ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 127 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT---GDTXTAHAGAKFPIKWT 180
Query: 284 ---TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSK 340
++ Y + D+++F V+L E+ P L++ D +
Sbjct: 181 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMERPEGC 238
Query: 341 PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
P K+ +++ C NP+ RP+ + + E
Sbjct: 239 PE--KVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 43/215 (20%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ---------------AKHCIIACGTA 227
++V+LLG G+ L++ E M +G L +LR+ +K +A A
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
G+ +L+ +HRD+ A N ++ EDF VK+ DFG+ R I + T G G
Sbjct: 134 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE----TDXXRKGGKGL 186
Query: 288 I-------------LLACGGDIYSFSVVLLELV-IRKQPTGPEFKDKNGGNLVDWVLDST 333
+ + D++SF VVL E+ + +QP ++ + ++ +V++
Sbjct: 187 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP----YQGLSNEQVLRFVMEGG 242
Query: 334 ILNAYSK-PSMLKMLQIVVGCIFDNPTTRPTMLRV 367
+L+ P ML L+++ C NP RP+ L +
Sbjct: 243 LLDKPDNCPDML--LELMRMCWQYNPKMRPSFLEI 275
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 22/209 (10%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRN---QAKHCIIACGTARGIT-FLH 234
I N+VQLLG C I+ E+M G+L D+LR Q + ++ A I+ +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 125
Query: 235 HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------- 283
+ + + IHRD+ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 126 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPE 182
Query: 284 TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSM 343
++ Y + D+++F V+L E+ P L++ D + P
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMERPEGCPE- 239
Query: 344 LKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
K+ +++ C NP+ RP+ + + E
Sbjct: 240 -KVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGIT 231
I N+VQLLG C I+ E+M G+L D+LR + + +A + +
Sbjct: 70 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 129
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG-------- 283
+L + + IHRD+ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 130 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWT 183
Query: 284 ---TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSK 340
++ Y + D+++F V+L E+ P L++ D +
Sbjct: 184 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMERPEGC 241
Query: 341 PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
P K+ +++ C NP+ RP+ + + E
Sbjct: 242 PE--KVYELMRACWQWNPSDRPSFAEIHQAFE 271
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGIT 231
I N+VQLLG C I+ E+M G+L D+LR + + +A + +
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 130
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG-------- 283
+L + + IHRD+ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 131 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWT 184
Query: 284 ---TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSK 340
++ Y + D+++F V+L E+ P L++ D +
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMERPEGC 242
Query: 341 PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
P K+ +++ C NP+ RP+ + + E
Sbjct: 243 PE--KVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 24/195 (12%)
Query: 199 IVYEYMVKGSLNDWLRNQA-------KHCIIACGTARGITFLHHRFQPHIIHRDINASNI 251
I+ EYM GSL D+L+ + K +A A G+ F+ R + IHR++ A+NI
Sbjct: 80 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRNLRAANI 136
Query: 252 LLNEDFEVKVSDFGLVRLISDCESHTSTDVAG---------TIGYILLACGGDIYSFSVV 302
L+++ K++DFGL RLI D E +T+ + A I Y D++SF ++
Sbjct: 137 LVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 195
Query: 303 LLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRP 362
L E+V + P + V L+ ++ Q++ C + P RP
Sbjct: 196 LTEIVTHGRIPYPGMTNPE----VIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRP 251
Query: 363 TMLRVQEFLEKYHTG 377
T ++ LE + T
Sbjct: 252 TFDYLRSVLEDFFTA 266
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGIT 231
I N+VQLLG C I+ E+M G+L D+LR + + +A + +
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 130
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG-------- 283
+L + + IHRD+ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 131 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWT 184
Query: 284 ---TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSK 340
++ Y + D+++F V+L E+ P L++ D +
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMERPEGC 242
Query: 341 PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
P K+ +++ C NP+ RP+ + + E
Sbjct: 243 PE--KVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 22/209 (10%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRN---QAKHCIIACGTARGIT-FLH 234
I N+VQLLG C I+ E+M G+L D+LR Q + ++ A I+ +
Sbjct: 79 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 138
Query: 235 HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------- 283
+ + + IHRD+ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 139 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPE 195
Query: 284 TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSM 343
++ Y + D+++F V+L E+ P L++ D + P
Sbjct: 196 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMERPEGCPE- 252
Query: 344 LKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
K+ +++ C NP+ RP+ + + E
Sbjct: 253 -KVYELMRACWQWNPSDRPSFAEIHQAFE 280
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 22/209 (10%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRN---QAKHCIIACGTARGIT-FLH 234
I N+VQLLG C I+ E+M G+L D+LR Q + ++ A I+ +
Sbjct: 68 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 127
Query: 235 HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------- 283
+ + + IHRD+ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 128 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPE 184
Query: 284 TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSM 343
++ Y + D+++F V+L E+ P L++ D + P
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMERPEGCPE- 241
Query: 344 LKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
K+ +++ C NP+ RP+ + + E
Sbjct: 242 -KVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGIT 231
I N+VQLLG C I+ E+M G+L D+LR + + +A + +
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 130
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG-------- 283
+L + + IHRD+ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 131 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWT 184
Query: 284 ---TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSK 340
++ Y + D+++F V+L E+ P L++ D +
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMERPEGC 242
Query: 341 PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
P K+ +++ C NP+ RP+ + + E
Sbjct: 243 PE--KVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGIT 231
I N+VQLLG C I+ E+M G+L D+LR + + +A + +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 125
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG-------- 283
+L + + IHRD+ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 126 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWT 179
Query: 284 ---TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSK 340
++ Y + D+++F V+L E+ P L++ D +
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMERPEGC 237
Query: 341 PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
P K+ +++ C NP+ RP+ + + E
Sbjct: 238 PE--KVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 33/221 (14%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCII-------ACGTARGITFLHH 235
+V+L E I+ E+M KGSL D+L++ ++ + A G+ ++
Sbjct: 68 KLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 127
Query: 236 RFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG---------TIG 286
+ + IHRD+ A+N+L++E K++DFGL R+I D E +T+ + A I
Sbjct: 128 K---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAIN 183
Query: 287 YILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML-- 344
+ +++SF ++L E+V + P G D + S + Y P M
Sbjct: 184 FGCFTIKSNVWSFGILLYEIVTYGKIPYP------GRTNAD--VMSALSQGYRMPRMENC 235
Query: 345 --KMLQIVVGCIFDNPTTRPTMLRVQEFLEKYHTGENFGRY 383
++ I+ C + RPT +Q L+ ++T G+Y
Sbjct: 236 PDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATE-GQY 275
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGIT 231
I N+VQLLG C I+ E+M G+L D+LR + + +A + +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 125
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG-------- 283
+L + + IHRD+ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 126 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWT 179
Query: 284 ---TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSK 340
++ Y + D+++F V+L E+ P L++ D +
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMERPEGC 237
Query: 341 PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
P K+ +++ C NP+ RP+ + + E
Sbjct: 238 PE--KVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 22/209 (10%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRN---QAKHCIIACGTARGIT-FLH 234
I N+VQLLG C I+ E+M G+L D+LR Q + ++ A I+ +
Sbjct: 68 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 127
Query: 235 HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------- 283
+ + + IHRD+ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 128 YLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWTAPE 184
Query: 284 TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSM 343
++ Y + D+++F V+L E+ P L++ D + P
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMERPEGCPE- 241
Query: 344 LKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
K+ +++ C NP+ RP+ + + E
Sbjct: 242 -KVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGIT 231
I N+VQLLG C I+ E+M G+L D+LR + + +A + +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 125
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG-------- 283
+L + + IHRD+ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 126 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWT 179
Query: 284 ---TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSK 340
++ Y + D+++F V+L E+ P L++ D +
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMERPEGC 237
Query: 341 PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
P K+ +++ C NP+ RP+ + + E
Sbjct: 238 PE--KVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGIT 231
I N+VQLLG C I+ E+M G+L D+LR + + +A + +
Sbjct: 71 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 130
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG-------- 283
+L + + IHRD+ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 131 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWT 184
Query: 284 ---TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSK 340
++ Y + D+++F V+L E+ P L++ D +
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMERPEGC 242
Query: 341 PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
P K+ +++ C NP+ RP+ + + E
Sbjct: 243 PE--KVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGIT 231
I N+VQLLG C I+ E+M G+L D+LR + + +A + +
Sbjct: 66 IKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 125
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG-------- 283
+L + + IHRD+ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 126 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWT 179
Query: 284 ---TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSK 340
++ Y + D+++F V+L E+ P L++ D +
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMERPEGC 237
Query: 341 PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
P K+ +++ C NP+ RP+ + + E
Sbjct: 238 PE--KVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 25/208 (12%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-NQAKHCIIA-CGTARGITF-LHHRFQP 239
NI+ L G + +IV EYM GSL+ +L+ N + +I G RGI+ + +
Sbjct: 84 NIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDM 143
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGYIL 289
+HRD+ A NIL+N + KVSDFGL R++ D T G I +
Sbjct: 144 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRK 203
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML----K 345
D++S+ +V+ E+V + ++ + + + + Y PS +
Sbjct: 204 FTSASDVWSYGIVMWEVV--------SYGERPYWEMTNQDVIKAVEEGYRLPSPMDCPAA 255
Query: 346 MLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+ Q+++ C +RP + L+K
Sbjct: 256 LYQLMLDCWQKERNSRPKFDEIVNMLDK 283
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 13/138 (9%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIA--CGTARGITF-LHHRFQP 239
NI++L G + +I+ EYM G+L+ +LR + + G RGI + +
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGYIL 289
+ +HRD+ A NIL+N + KVSDFGL R++ D T T G I Y
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 290 LACGGDIYSFSVVLLELV 307
D++SF +V+ E++
Sbjct: 227 FTSASDVWSFGIVMWEVM 244
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 24/193 (12%)
Query: 199 IVYEYMVKGSLNDWLRNQ-------AKHCIIACGTARGITFLHHRFQPHIIHRDINASNI 251
I+ E+M KGSL D+L++ K + A G+ F+ R + IHRD+ A+NI
Sbjct: 86 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANI 142
Query: 252 LLNEDFEVKVSDFGLVRLISDCESHTSTDVAG---------TIGYILLACGGDIYSFSVV 302
L++ K++DFGL R+I D E +T+ + A I + D++SF ++
Sbjct: 143 LVSASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGIL 201
Query: 303 LLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRP 362
L+E+V + P + V L+ + ++ I++ C + P RP
Sbjct: 202 LMEIVTYGRIPYPGMSNPE----VIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERP 257
Query: 363 TMLRVQEFLEKYH 375
T +Q L+ +
Sbjct: 258 TFEYIQSVLDDFE 270
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 25/211 (11%)
Query: 183 NIVQLLGYCPVGEKK--LIVYEYMVKGSLNDWLRNQAKH-----CII--ACGTARGITFL 233
N+VQLLG V EK IV EYM KGSL D+LR++ + C++ + + +L
Sbjct: 66 NLVQLLGVI-VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 124
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL---- 289
+ +HRD+ A N+L++ED KVSDFGL + S + V T L
Sbjct: 125 EGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAA 181
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYS--KPSMLKML 347
+ D++SF ++L E+ + P K ++V V ++A P++ +++
Sbjct: 182 FSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVPRVEKGYKMDAPDGCPPAVYEVM 238
Query: 348 QIVVGCIFDNPTTRPTMLRVQEFLEKYHTGE 378
+ C + RP+ L+++E LE T E
Sbjct: 239 K---NCWHLDAAMRPSFLQLREQLEHIKTHE 266
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 25/211 (11%)
Query: 183 NIVQLLGYCPVGEKK--LIVYEYMVKGSLNDWLRNQAKH-----CII--ACGTARGITFL 233
N+VQLLG V EK IV EYM KGSL D+LR++ + C++ + + +L
Sbjct: 60 NLVQLLGVI-VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 118
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL---- 289
+ +HRD+ A N+L++ED KVSDFGL + S + V T L
Sbjct: 119 EGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKK 175
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYS--KPSMLKML 347
+ D++SF ++L E+ + P K ++V V ++A P++ +++
Sbjct: 176 FSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVPRVEKGYKMDAPDGCPPAVYEVM 232
Query: 348 QIVVGCIFDNPTTRPTMLRVQEFLEKYHTGE 378
+ C + RP+ L+++E LE T E
Sbjct: 233 K---NCWHLDAAMRPSFLQLREQLEHIKTHE 260
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 43/215 (20%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ---------------AKHCIIACGTA 227
++V+LLG G+ L++ E M +G L +LR+ +K +A A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
G+ +L+ +HRD+ A N ++ EDF VK+ DFG+ R I + T G G
Sbjct: 143 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE----TDXXRKGGKGL 195
Query: 288 I-------------LLACGGDIYSFSVVLLELV-IRKQPTGPEFKDKNGGNLVDWVLDST 333
+ + D++SF VVL E+ + +QP ++ + ++ +V++
Sbjct: 196 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP----YQGLSNEQVLRFVMEGG 251
Query: 334 ILNAYSK-PSMLKMLQIVVGCIFDNPTTRPTMLRV 367
+L+ P ML +++ C NP RP+ L +
Sbjct: 252 LLDKPDNCPDML--FELMRMCWQYNPKMRPSFLEI 284
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 27/206 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITF 232
++ +VQL G C +V E+M G L+D+LR Q A+ + C G+ +
Sbjct: 60 LSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY 119
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI---- 288
L + +IHRD+ A N L+ E+ +KVSDFG+ R + D + +ST + +
Sbjct: 120 LE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 176
Query: 289 ----LLACGGDIYSFSVVLLELVIR-KQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSM 343
+ D++SF V++ E+ K P +++++ +V+ + ST Y KP +
Sbjct: 177 FSFSRYSSKSDVWSFGVLMWEVFSEGKIP----YENRSNSEVVEDI--STGFRLY-KPRL 229
Query: 344 LK--MLQIVVGCIFDNPTTRPTMLRV 367
+ QI+ C + P RP R+
Sbjct: 230 ASTHVYQIMNHCWRERPEDRPAFSRL 255
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 25/211 (11%)
Query: 183 NIVQLLGYCPVGEKK--LIVYEYMVKGSLNDWLRNQAKH-----CII--ACGTARGITFL 233
N+VQLLG V EK IV EYM KGSL D+LR++ + C++ + + +L
Sbjct: 75 NLVQLLGVI-VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 133
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL---- 289
+ +HRD+ A N+L++ED KVSDFGL + S + V T L
Sbjct: 134 EGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKK 190
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYS--KPSMLKML 347
+ D++SF ++L E+ + P K ++V V ++A P++ +++
Sbjct: 191 FSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVPRVEKGYKMDAPDGCPPAVYEVM 247
Query: 348 QIVVGCIFDNPTTRPTMLRVQEFLEKYHTGE 378
+ C + RP+ L+++E LE T E
Sbjct: 248 K---NCWHLDAAMRPSFLQLREQLEHIKTHE 275
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 43/215 (20%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ---------------AKHCIIACGTA 227
++V+LLG G+ L++ E M +G L +LR+ +K +A A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 148
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
G+ +L+ +HRD+ A N ++ EDF VK+ DFG+ R I + + + G G
Sbjct: 149 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGL 201
Query: 288 I-------------LLACGGDIYSFSVVLLELV-IRKQPTGPEFKDKNGGNLVDWVLDST 333
+ + D++SF VVL E+ + +QP ++ + ++ +V++
Sbjct: 202 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP----YQGLSNEQVLRFVMEGG 257
Query: 334 ILNAYSK-PSMLKMLQIVVGCIFDNPTTRPTMLRV 367
+L+ P ML +++ C NP RP+ L +
Sbjct: 258 LLDKPDNCPDML--FELMRMCWQYNPKMRPSFLEI 290
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 43/215 (20%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ---------------AKHCIIACGTA 227
++V+LLG G+ L++ E M +G L +LR+ +K +A A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
G+ +L+ +HRD+ A N ++ EDF VK+ DFG+ R I + + + G G
Sbjct: 149 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGL 201
Query: 288 I-------------LLACGGDIYSFSVVLLELV-IRKQPTGPEFKDKNGGNLVDWVLDST 333
+ + D++SF VVL E+ + +QP ++ + ++ +V++
Sbjct: 202 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP----YQGLSNEQVLRFVMEGG 257
Query: 334 ILNAYSK-PSMLKMLQIVVGCIFDNPTTRPTMLRV 367
+L+ P ML +++ C NP RP+ L +
Sbjct: 258 LLDKPDNCPDML--FELMRMCWQYNPKMRPSFLEI 290
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 99/215 (46%), Gaps = 43/215 (20%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ---------------AKHCIIACGTA 227
++V+LLG G+ L++ E M +G L +LR+ +K +A A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
G+ +L+ +HRD+ A N + EDF VK+ DFG+ R I + + + G G
Sbjct: 136 DGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGL 188
Query: 288 I-------------LLACGGDIYSFSVVLLELV-IRKQPTGPEFKDKNGGNLVDWVLDST 333
+ + D++SF VVL E+ + +QP ++ + ++ +V++
Sbjct: 189 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP----YQGLSNEQVLRFVMEGG 244
Query: 334 ILNAYSK-PSMLKMLQIVVGCIFDNPTTRPTMLRV 367
+L+ P ML L+++ C NP RP+ L +
Sbjct: 245 LLDKPDNCPDML--LELMRMCWQYNPKMRPSFLEI 277
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 43/215 (20%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ---------------AKHCIIACGTA 227
++V+LLG G+ L++ E M +G L +LR+ +K +A A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
G+ +L+ +HRD+ A N ++ EDF VK+ DFG+ R I + + + G G
Sbjct: 143 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGL 195
Query: 288 I-------------LLACGGDIYSFSVVLLELV-IRKQPTGPEFKDKNGGNLVDWVLDST 333
+ + D++SF VVL E+ + +QP ++ + ++ +V++
Sbjct: 196 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP----YQGLSNEQVLRFVMEGG 251
Query: 334 ILNAYSK-PSMLKMLQIVVGCIFDNPTTRPTMLRV 367
+L+ P ML +++ C NP RP+ L +
Sbjct: 252 LLDKPDNCPDML--FELMRMCWQYNPKMRPSFLEI 284
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-NQAKHCIIA-CGTARGI-TFLHHRFQP 239
NI++L G + +IV E M GSL+ +LR + A+ +I G RGI + + +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGYIL 289
+HRD+ A NIL+N + KVSDFGL R++ D T G I Y
Sbjct: 167 GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML----K 345
D++S+ +VL E++ + E +++ VD Y P +
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD--------EGYRLPPPMDCPAA 278
Query: 346 MLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+ Q+++ C + RP ++ L+K
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 43/215 (20%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ---------------AKHCIIACGTA 227
++V+LLG G+ L++ E M +G L +LR+ +K +A A
Sbjct: 80 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 139
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
G+ +L+ +HRD+ A N ++ EDF VK+ DFG+ R I + + + G G
Sbjct: 140 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGL 192
Query: 288 I-------------LLACGGDIYSFSVVLLELV-IRKQPTGPEFKDKNGGNLVDWVLDST 333
+ + D++SF VVL E+ + +QP ++ + ++ +V++
Sbjct: 193 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP----YQGLSNEQVLRFVMEGG 248
Query: 334 ILNAYSK-PSMLKMLQIVVGCIFDNPTTRPTMLRV 367
+L+ P ML +++ C NP RP+ L +
Sbjct: 249 LLDKPDNCPDML--FELMRMCWQYNPKMRPSFLEI 281
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 43/215 (20%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ---------------AKHCIIACGTA 227
++V+LLG G+ L++ E M +G L +LR+ +K +A A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
G+ +L+ +HRD+ A N ++ EDF VK+ DFG+ R I + + + G G
Sbjct: 142 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGL 194
Query: 288 I-------------LLACGGDIYSFSVVLLELV-IRKQPTGPEFKDKNGGNLVDWVLDST 333
+ + D++SF VVL E+ + +QP ++ + ++ +V++
Sbjct: 195 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP----YQGLSNEQVLRFVMEGG 250
Query: 334 ILNAYSK-PSMLKMLQIVVGCIFDNPTTRPTMLRV 367
+L+ P ML +++ C NP RP+ L +
Sbjct: 251 LLDKPDNCPDML--FELMRMCWQYNPKMRPSFLEI 283
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 43/215 (20%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ---------------AKHCIIACGTA 227
++V+LLG G+ L++ E M +G L +LR+ +K +A A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
G+ +L+ +HRD+ A N ++ EDF VK+ DFG+ R I + + + G G
Sbjct: 136 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGL 188
Query: 288 I-------------LLACGGDIYSFSVVLLELV-IRKQPTGPEFKDKNGGNLVDWVLDST 333
+ + D++SF VVL E+ + +QP ++ + ++ +V++
Sbjct: 189 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP----YQGLSNEQVLRFVMEGG 244
Query: 334 ILNAYSK-PSMLKMLQIVVGCIFDNPTTRPTMLRV 367
+L+ P ML +++ C NP RP+ L +
Sbjct: 245 LLDKPDNCPDML--FELMRMCWQYNPKMRPSFLEI 277
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 43/215 (20%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ---------------AKHCIIACGTA 227
++V+LLG G+ L++ E M +G L +LR+ +K +A A
Sbjct: 111 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 170
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
G+ +L+ +HRD+ A N ++ EDF VK+ DFG+ R I + + + G G
Sbjct: 171 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGL 223
Query: 288 I-------------LLACGGDIYSFSVVLLELV-IRKQPTGPEFKDKNGGNLVDWVLDST 333
+ + D++SF VVL E+ + +QP ++ + ++ +V++
Sbjct: 224 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP----YQGLSNEQVLRFVMEGG 279
Query: 334 ILNAYSK-PSMLKMLQIVVGCIFDNPTTRPTMLRV 367
+L+ P ML +++ C NP RP+ L +
Sbjct: 280 LLDKPDNCPDML--FELMRMCWQYNPKMRPSFLEI 312
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-NQAKHCIIA-CGTARGI-TFLHHRFQP 239
NI++L G + +IV E M GSL+ +LR + A+ +I G RGI + + +
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGYIL 289
+HRD+ A NIL+N + KVSDFGL R++ D T G I Y
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML----K 345
D++S+ +VL E++ + E +++ VD Y P +
Sbjct: 198 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD--------EGYRLPPPMDCPAA 249
Query: 346 MLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+ Q+++ C + RP ++ L+K
Sbjct: 250 LYQLMLDCWQKDRNNRPKFEQIVSILDK 277
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 43/215 (20%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ---------------AKHCIIACGTA 227
++V+LLG G+ L++ E M +G L +LR+ +K +A A
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
G+ +L+ +HRD+ A N ++ EDF VK+ DFG+ R I + + + G G
Sbjct: 139 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGL 191
Query: 288 I-------------LLACGGDIYSFSVVLLELV-IRKQPTGPEFKDKNGGNLVDWVLDST 333
+ + D++SF VVL E+ + +QP ++ + ++ +V++
Sbjct: 192 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP----YQGLSNEQVLRFVMEGG 247
Query: 334 ILNAYSK-PSMLKMLQIVVGCIFDNPTTRPTMLRV 367
+L+ P ML +++ C NP RP+ L +
Sbjct: 248 LLDKPDNCPDML--FELMRMCWQYNPKMRPSFLEI 280
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 43/215 (20%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ---------------AKHCIIACGTA 227
++V+LLG G+ L++ E M +G L +LR+ +K +A A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
G+ +L+ +HRD+ A N ++ EDF VK+ DFG+ R I + + + G G
Sbjct: 142 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGL 194
Query: 288 I-------------LLACGGDIYSFSVVLLELV-IRKQPTGPEFKDKNGGNLVDWVLDST 333
+ + D++SF VVL E+ + +QP ++ + ++ +V++
Sbjct: 195 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP----YQGLSNEQVLRFVMEGG 250
Query: 334 ILNAYSK-PSMLKMLQIVVGCIFDNPTTRPTMLRV 367
+L+ P ML +++ C NP RP+ L +
Sbjct: 251 LLDKPDNCPDML--FELMRMCWQYNPKMRPSFLEI 283
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGIT 231
I N+VQLLG C + IV EYM G+L D+LR + + +A + +
Sbjct: 85 IKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAME 144
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG-------- 283
+L + + IHRD+ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 145 YLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLMT---GDTYTAHAGAKFPIKWT 198
Query: 284 ---TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSK 340
++ Y + D+++F V+L E+ P +L L+ +
Sbjct: 199 APESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDL----LEKGYRMEQPE 254
Query: 341 PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
K+ +++ C +P RP+ + E
Sbjct: 255 GCPPKVYELMRACWKWSPADRPSFAETHQAFE 286
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-NQAKHCIIA-CGTARGI-TFLHHRFQP 239
NI++L G + +IV E M GSL+ +LR + A+ +I G RGI + + +
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGYIL 289
+HRD+ A NIL+N + KVSDFGL R++ D T G I Y
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML----K 345
D++S+ +VL E++ + E +++ VD Y P +
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD--------EGYRLPPPMDCPAA 278
Query: 346 MLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+ Q+++ C + RP ++ L+K
Sbjct: 279 LYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 25/208 (12%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKH--CIIACGTARGITF-LHHRFQP 239
N+V L G G+ +IV E+M G+L+ +LR I G RGI + +
Sbjct: 105 NVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADM 164
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGYIL 289
+HRD+ A NIL+N + KVSDFGL R+I D T G I Y
Sbjct: 165 GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRK 224
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK---- 345
D++S+ +V+ E++ + ++ ++ + + I Y P+ +
Sbjct: 225 FTSASDVWSYGIVMWEVM--------SYGERPYWDMSNQDVIKAIEEGYRLPAPMDCPAG 276
Query: 346 MLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+ Q+++ C RP ++ L+K
Sbjct: 277 LHQLMLDCWQKERAERPKFEQIVGILDK 304
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGIT 231
I N+VQLLG C I+ E+M G+L D+LR + + +A + +
Sbjct: 270 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 329
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG-------- 283
+L + + IHR++ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 330 YLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWT 383
Query: 284 ---TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSK 340
++ Y + D+++F V+L E+ P L++ D +
Sbjct: 384 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMERPEGC 441
Query: 341 PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
P K+ +++ C NP+ RP+ + + E
Sbjct: 442 PE--KVYELMRACWQWNPSDRPSFAEIHQAFE 471
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 13/138 (9%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-NQAKHCIIA-CGTARGI-TFLHHRFQP 239
NI+ L G + +I+ EYM GSL+ +LR N + +I G RGI + + +
Sbjct: 91 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 150
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGYIL 289
+HRD+ A NIL+N + KVSDFG+ R++ D T G I Y
Sbjct: 151 SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 210
Query: 290 LACGGDIYSFSVVLLELV 307
D++S+ +V+ E++
Sbjct: 211 FTSASDVWSYGIVMWEVM 228
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGIT 231
I N+VQLLG C I+ E+M G+L D+LR + + +A + +
Sbjct: 312 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAME 371
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG-------- 283
+L + + IHR++ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 372 YLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWT 425
Query: 284 ---TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSK 340
++ Y + D+++F V+L E+ P L++ D +
Sbjct: 426 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMERPEGC 483
Query: 341 PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
P K+ +++ C NP+ RP+ + + E
Sbjct: 484 PE--KVYELMRACWQWNPSDRPSFAEIHQAFE 513
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGIT 231
I N+VQLLG C I+ E+M G+L D+LR + + +A + +
Sbjct: 273 IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 332
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG-------- 283
+L + + IHR++ A N L+ E+ VKV+DFGL RL++ T T AG
Sbjct: 333 YLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAHAGAKFPIKWT 386
Query: 284 ---TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSK 340
++ Y + D+++F V+L E+ P L++ D +
Sbjct: 387 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE--KDYRMERPEGC 444
Query: 341 PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
P K+ +++ C NP+ RP+ + + E
Sbjct: 445 PE--KVYELMRACWQWNPSDRPSFAEIHQAFE 474
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 13/138 (9%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-NQAKHCIIA-CGTARGI-TFLHHRFQP 239
NI+ L G + +I+ EYM GSL+ +LR N + +I G RGI + + +
Sbjct: 76 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 135
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGYIL 289
+HRD+ A NIL+N + KVSDFG+ R++ D T G I Y
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 195
Query: 290 LACGGDIYSFSVVLLELV 307
D++S+ +V+ E++
Sbjct: 196 FTSASDVWSYGIVMWEVM 213
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 13/138 (9%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-NQAKHCIIA-CGTARGI-TFLHHRFQP 239
NI+ L G + +I+ EYM GSL+ +LR N + +I G RGI + + +
Sbjct: 70 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 129
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGYIL 289
+HRD+ A NIL+N + KVSDFG+ R++ D T G I Y
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 189
Query: 290 LACGGDIYSFSVVLLELV 307
D++S+ +V+ E++
Sbjct: 190 FTSASDVWSYGIVMWEVM 207
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 16/186 (8%)
Query: 199 IVYEYMVKGSLNDWLRNQA-------KHCIIACGTARGITFLHHRFQPHIIHRDINASNI 251
I+ E+M KGSL D+L++ K + A G+ F+ R + IHRD+ A+NI
Sbjct: 253 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANI 309
Query: 252 LLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLACGGDIYSFSVVLLELVIRKQ 311
L++ K++DFGL R+ + + A G + D++SF ++L+E+V +
Sbjct: 310 LVSASLVCKIADFGLARVGAKFPIKWTAPEAINFGSFTIKS--DVWSFGILLMEIVTYGR 367
Query: 312 PTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFL 371
P + V L+ + ++ I++ C + P RPT +Q L
Sbjct: 368 IPYPGMSNPE----VIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 423
Query: 372 EKYHTG 377
+ ++T
Sbjct: 424 DDFYTA 429
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 43/225 (19%)
Query: 178 GIAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRN---QAKH------------CII 222
G ++V+LLG G+ L+V E M G L +LR+ +A++ +
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 223 ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA 282
A A G+ +L+ + +HRD+ A N ++ DF VK+ DFG+ R I + T
Sbjct: 136 AAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE----TDXXRK 188
Query: 283 GTIGYI-------------LLACGGDIYSFSVVLLELV-IRKQPTGPEFKDKNGGNLVDW 328
G G + + D++SF VVL E+ + +QP ++ + ++ +
Sbjct: 189 GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----YQGLSNEQVLKF 244
Query: 329 VLDSTILNAYSK-PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
V+D L+ P ++ ++ C NP RPT L + L+
Sbjct: 245 VMDGGYLDQPDNCPE--RVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 178 GIAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRN---QAKH------------CII 222
G ++V+LLG G+ L+V E M G L +LR+ +A++ +
Sbjct: 75 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 134
Query: 223 ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD-- 280
A A G+ +L+ + +HRD+ A N ++ DF VK+ DFG+ R I + + +
Sbjct: 135 AAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKG 191
Query: 281 -------VAGTIGYILLACGGDIYSFSVVLLELV-IRKQPTGPEFKDKNGGNLVDWVLDS 332
++ + D++SF VVL E+ + +QP ++ + ++ +V+D
Sbjct: 192 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----YQGLSNEQVLKFVMDG 247
Query: 333 TILNAYSK-PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
L+ P ++ ++ C NP RPT L + L+
Sbjct: 248 GYLDQPDNCPE--RVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 43/225 (19%)
Query: 178 GIAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRN---QAKH------------CII 222
G ++V+LLG G+ L+V E M G L +LR+ +A++ +
Sbjct: 73 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 132
Query: 223 ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA 282
A A G+ +L+ + +HRD+ A N ++ DF VK+ DFG+ R I + T
Sbjct: 133 AAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE----TDXXRK 185
Query: 283 GTIGYI-------------LLACGGDIYSFSVVLLELV-IRKQPTGPEFKDKNGGNLVDW 328
G G + + D++SF VVL E+ + +QP ++ + ++ +
Sbjct: 186 GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----YQGLSNEQVLKF 241
Query: 329 VLDSTILNAYSK-PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
V+D L+ P ++ ++ C NP RPT L + L+
Sbjct: 242 VMDGGYLDQPDNCPE--RVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 43/225 (19%)
Query: 178 GIAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRN---QAKH------------CII 222
G ++V+LLG G+ L+V E M G L +LR+ +A++ +
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 223 ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA 282
A A G+ +L+ + +HRD+ A N ++ DF VK+ DFG+ R I + T
Sbjct: 136 AAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE----TDXXRK 188
Query: 283 GTIGYI-------------LLACGGDIYSFSVVLLELV-IRKQPTGPEFKDKNGGNLVDW 328
G G + + D++SF VVL E+ + +QP ++ + ++ +
Sbjct: 189 GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----YQGLSNEQVLKF 244
Query: 329 VLDSTILNAYSK-PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
V+D L+ P ++ ++ C NP RPT L + L+
Sbjct: 245 VMDGGYLDQPDNCPE--RVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 35/221 (15%)
Query: 178 GIAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHC---------------II 222
G ++V+LLG G+ L+V E M G L +LR+ +
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 223 ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD-- 280
A A G+ +L+ + +HRD+ A N ++ DF VK+ DFG+ R I + + +
Sbjct: 136 AAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKG 192
Query: 281 -------VAGTIGYILLACGGDIYSFSVVLLELV-IRKQPTGPEFKDKNGGNLVDWVLDS 332
++ + D++SF VVL E+ + +QP ++ + ++ +V+D
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----YQGLSNEQVLKFVMDG 248
Query: 333 TILNAYSK-PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
L+ P ++ ++ C NP RPT L + L+
Sbjct: 249 GYLDQPDNCPE--RVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 29/206 (14%)
Query: 178 GIAFKNIVQLLG-YCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCII------ACGTARGI 230
G+ N++ L+G P ++ YM G L ++R+ ++ + ARG+
Sbjct: 78 GLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGM 137
Query: 231 TFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCE-------SHTSTDVAG 283
+L + +HRD+ A N +L+E F VKV+DFGL R I D E H V
Sbjct: 138 EYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKW 194
Query: 284 T----IGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTIL--NA 337
T + D++SF V+L EL+ R P ++ + +L ++ L
Sbjct: 195 TALESLQTYRFTTKSDVWSFGVLLWELLTR---GAPPYRHIDPFDLTHFLAQGRRLPQPE 251
Query: 338 YSKPSMLKMLQIVVGCIFDNPTTRPT 363
Y S+ +++Q C +P RPT
Sbjct: 252 YCPDSLYQVMQ---QCWEADPAVRPT 274
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 15/140 (10%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-NQAKHCIIA-CGTARGITF-LHHRFQP 239
N++ L G +I+ E+M GSL+ +LR N + +I G RGI + +
Sbjct: 95 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM 154
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESH-TSTDVAG-----------TIGY 287
+ +HRD+ A NIL+N + KVSDFGL R + D S T T G I Y
Sbjct: 155 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 214
Query: 288 ILLACGGDIYSFSVVLLELV 307
D++S+ +V+ E++
Sbjct: 215 RKFTSASDVWSYGIVMWEVM 234
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 35/221 (15%)
Query: 178 GIAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHC---------------II 222
G ++V+LLG G+ L+V E M G L +LR+ +
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 223 ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD-- 280
A A G+ +L+ + +HRD+ A N ++ DF VK+ DFG+ R I + +
Sbjct: 136 AAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKG 192
Query: 281 -------VAGTIGYILLACGGDIYSFSVVLLELV-IRKQPTGPEFKDKNGGNLVDWVLDS 332
++ + D++SF VVL E+ + +QP ++ + ++ +V+D
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----YQGLSNEQVLKFVMDG 248
Query: 333 TILNAYSK-PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
L+ P ++ ++ C NP RPT L + L+
Sbjct: 249 GYLDQPDNCPE--RVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 19/176 (10%)
Query: 199 IVYEYMVKGSLNDWLR----NQAKHCIIACGTARGITFLHHRFQPHIIHRDINASNILLN 254
I+ EY+ GS D L ++ + I +G+ +LH + IHRDI A+N+LL+
Sbjct: 82 IIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLS 138
Query: 255 EDFEVKVSDFGLVRLISDCESHTSTDVAG-------TIGYILLACGGDIYSFSVVLLELV 307
E EVK++DFG+ ++D + +T V I DI+S + +EL
Sbjct: 139 EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELA 198
Query: 308 IRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRPT 363
R +P E L+ T+ YSKP + + V C+ P+ RPT
Sbjct: 199 -RGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP----LKEFVEACLNKEPSFRPT 249
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 19/176 (10%)
Query: 199 IVYEYMVKGSLNDWLR----NQAKHCIIACGTARGITFLHHRFQPHIIHRDINASNILLN 254
I+ EY+ GS D L ++ + I +G+ +LH + IHRDI A+N+LL+
Sbjct: 102 IIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLS 158
Query: 255 EDFEVKVSDFGLVRLISDCESHTSTDVAG-------TIGYILLACGGDIYSFSVVLLELV 307
E EVK++DFG+ ++D + +T V I DI+S + +EL
Sbjct: 159 EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELA 218
Query: 308 IRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRPT 363
R +P E L+ T+ YSKP + + V C+ P+ RPT
Sbjct: 219 -RGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP----LKEFVEACLNKEPSFRPT 269
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 178 GIAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRN---QAKH------------CII 222
G ++V+LLG G+ L+V E M G L +LR+ +A++ +
Sbjct: 76 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 135
Query: 223 ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD-- 280
A A G+ +L+ + +HR++ A N ++ DF VK+ DFG+ R I + + +
Sbjct: 136 AAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKG 192
Query: 281 -------VAGTIGYILLACGGDIYSFSVVLLELV-IRKQPTGPEFKDKNGGNLVDWVLDS 332
++ + D++SF VVL E+ + +QP ++ + ++ +V+D
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----YQGLSNEQVLKFVMDG 248
Query: 333 TILNAYSK-PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
L+ P ++ ++ C NP RPT L + L+
Sbjct: 249 GYLDQPDNCPE--RVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 178 GIAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRN---QAKH------------CII 222
G ++V+LLG G+ L+V E M G L +LR+ +A++ +
Sbjct: 77 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 136
Query: 223 ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD-- 280
A A G+ +L+ + +HR++ A N ++ DF VK+ DFG+ R I + + +
Sbjct: 137 AAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKG 193
Query: 281 -------VAGTIGYILLACGGDIYSFSVVLLELV-IRKQPTGPEFKDKNGGNLVDWVLDS 332
++ + D++SF VVL E+ + +QP ++ + ++ +V+D
Sbjct: 194 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----YQGLSNEQVLKFVMDG 249
Query: 333 TILNAYSK-PSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
L+ P ++ ++ C NP RPT L + L+
Sbjct: 250 GYLDQPDNCPE--RVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 36/222 (16%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR------------------NQAKHC 220
+ ++IV+ G C G+ ++V+EYM G LN +LR Q++
Sbjct: 72 LQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQML 131
Query: 221 IIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCE-----S 275
IA A G+ +L + H +HRD+ N L+ E+ VK+ DFG+ R + +
Sbjct: 132 HIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGG 188
Query: 276 HTSTDV----AGTIGYILLACGGDIYSFSVVLLELVIR-KQPTGPEFKDKNGGNLVDWVL 330
HT + +I Y D++S VVL E+ KQP + + +++ +
Sbjct: 189 HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP----WYQLSNNEVIECIT 244
Query: 331 DSTILNAYSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
+L + ++ ++++GC P R + + L+
Sbjct: 245 QGRVLQR-PRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 21/167 (12%)
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCE-SHTSTD 280
IA TARG+ +LH + IIHRD+ ++NI L+ED VK+ DFGL + S SH
Sbjct: 113 IARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQ 169
Query: 281 VAGTIGYIL-----------LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWV 329
++G+I ++ + D+Y+F +VL EL+ + P N +++ V
Sbjct: 170 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYS---NINNRDQIIEMV 226
Query: 330 LDSTILNAYSKPSM---LKMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
++ SK +M +++ C+ RP+ R+ +E+
Sbjct: 227 GRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 273
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 85/201 (42%), Gaps = 25/201 (12%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRN-----QAKHCIIAC-GTARGITF 232
++ + +VQL G C I+ EYM G L ++LR Q + + C + +
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 135
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTST--------DVAGT 284
L + +HRD+ A N L+N+ VKVSDFGL R + D E +S
Sbjct: 136 LESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEV 192
Query: 285 IGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML 344
+ Y + DI++F V++ E+ + F + + + L Y +P +
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-----AQGLRLY-RPHLA 246
Query: 345 --KMLQIVVGCIFDNPTTRPT 363
K+ I+ C + RPT
Sbjct: 247 SEKVYTIMYSCWHEKADERPT 267
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 85/201 (42%), Gaps = 25/201 (12%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRN-----QAKHCIIAC-GTARGITF 232
++ + +VQL G C I+ EYM G L ++LR Q + + C + +
Sbjct: 60 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 119
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA--------GT 284
L + +HRD+ A N L+N+ VKVSDFGL R + D E +S
Sbjct: 120 LESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 176
Query: 285 IGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML 344
+ Y + DI++F V++ E+ + F + + + L Y +P +
Sbjct: 177 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-----AQGLRLY-RPHLA 230
Query: 345 --KMLQIVVGCIFDNPTTRPT 363
K+ I+ C + RPT
Sbjct: 231 SEKVYTIMYSCWHEKADERPT 251
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 85/201 (42%), Gaps = 25/201 (12%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRN-----QAKHCIIAC-GTARGITF 232
++ + +VQL G C I+ EYM G L ++LR Q + + C + +
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA--------GT 284
L + +HRD+ A N L+N+ VKVSDFGL R + D E +S
Sbjct: 121 LESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 177
Query: 285 IGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML 344
+ Y + DI++F V++ E+ + F + + + L Y +P +
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-----AQGLRLY-RPHLA 231
Query: 345 --KMLQIVVGCIFDNPTTRPT 363
K+ I+ C + RPT
Sbjct: 232 SEKVYTIMYSCWHEKADERPT 252
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 19/176 (10%)
Query: 199 IVYEYMVKGSLNDWLR----NQAKHCIIACGTARGITFLHHRFQPHIIHRDINASNILLN 254
I+ EY+ GS D L ++ + I +G+ +LH + IHRDI A+N+LL+
Sbjct: 82 IIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLS 138
Query: 255 EDFEVKVSDFGLVRLISDCESHTSTDVAG-------TIGYILLACGGDIYSFSVVLLELV 307
E EVK++DFG+ ++D + + V I DI+S + +EL
Sbjct: 139 EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELA 198
Query: 308 IRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRPT 363
R +P E L+ T+ YSKP + + V C+ P+ RPT
Sbjct: 199 -RGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP----LKEFVEACLNKEPSFRPT 249
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 19/176 (10%)
Query: 199 IVYEYMVKGSLNDWLR----NQAKHCIIACGTARGITFLHHRFQPHIIHRDINASNILLN 254
I+ EY+ GS D L ++ + I +G+ +LH + IHRDI A+N+LL+
Sbjct: 97 IIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLS 153
Query: 255 EDFEVKVSDFGLVRLISDCESHTSTDVAG-------TIGYILLACGGDIYSFSVVLLELV 307
E EVK++DFG+ ++D + + V I DI+S + +EL
Sbjct: 154 EHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELA 213
Query: 308 IRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRPT 363
R +P E L+ T+ YSKP + + V C+ P+ RPT
Sbjct: 214 -RGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP----LKEFVEACLNKEPSFRPT 264
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 27/152 (17%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCII----ACGTARGITFLHHRFQ 238
NI+ L G C +V E+ G LN L + I A ARG+ +LH
Sbjct: 67 NIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAI 126
Query: 239 PHIIHRDINASNILLNEDFE--------VKVSDFGLVRLISDCESHTSTDVAGTIGYILL 290
IIHRD+ +SNIL+ + E +K++DFGL R E H +T ++ Y +
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAAGAYAWM 181
Query: 291 AC----------GGDIYSFSVVLLELVIRKQP 312
A G D++S+ V+L EL+ + P
Sbjct: 182 APEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 85/201 (42%), Gaps = 25/201 (12%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRN-----QAKHCIIAC-GTARGITF 232
++ + +VQL G C I+ EYM G L ++LR Q + + C + +
Sbjct: 56 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 115
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA--------GT 284
L + +HRD+ A N L+N+ VKVSDFGL R + D E +S
Sbjct: 116 LESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 172
Query: 285 IGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML 344
+ Y + DI++F V++ E+ + F + + + L Y +P +
Sbjct: 173 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-----AQGLRLY-RPHLA 226
Query: 345 --KMLQIVVGCIFDNPTTRPT 363
K+ I+ C + RPT
Sbjct: 227 SEKVYTIMYSCWHEKADERPT 247
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 85/201 (42%), Gaps = 25/201 (12%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRN-----QAKHCIIAC-GTARGITF 232
++ + +VQL G C I+ EYM G L ++LR Q + + C + +
Sbjct: 67 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 126
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA--------GT 284
L + +HRD+ A N L+N+ VKVSDFGL R + D E +S
Sbjct: 127 LESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 183
Query: 285 IGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML 344
+ Y + DI++F V++ E+ + F + + + L Y +P +
Sbjct: 184 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-----AQGLRLY-RPHLA 237
Query: 345 --KMLQIVVGCIFDNPTTRPT 363
K+ I+ C + RPT
Sbjct: 238 SEKVYTIMYSCWHEKADERPT 258
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 85/201 (42%), Gaps = 25/201 (12%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRN-----QAKHCIIAC-GTARGITF 232
++ + +VQL G C I+ EYM G L ++LR Q + + C + +
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA--------GT 284
L + +HRD+ A N L+N+ VKVSDFGL R + D E +S
Sbjct: 121 LESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEV 177
Query: 285 IGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML 344
+ Y + DI++F V++ E+ + F + + + L Y +P +
Sbjct: 178 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-----AQGLRLY-RPHLA 231
Query: 345 --KMLQIVVGCIFDNPTTRPT 363
K+ I+ C + RPT
Sbjct: 232 SEKVYTIMYSCWHEKADERPT 252
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 85/201 (42%), Gaps = 25/201 (12%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRN-----QAKHCIIAC-GTARGITF 232
++ + +VQL G C I+ EYM G L ++LR Q + + C + +
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 135
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTST--------DVAGT 284
L + +HRD+ A N L+N+ VKVSDFGL R + D E +S
Sbjct: 136 LESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV 192
Query: 285 IGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML 344
+ Y + DI++F V++ E+ + F + + + L Y +P +
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-----AQGLRLY-RPHLA 246
Query: 345 --KMLQIVVGCIFDNPTTRPT 363
K+ I+ C + RPT
Sbjct: 247 SEKVYTIMYSCWHEKADERPT 267
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-NQAKHCIIA-CGTARGITF-LHHRFQP 239
N++ L G +I+ E+M GSL+ +LR N + +I G RGI + +
Sbjct: 69 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM 128
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESH-TSTDVAG-----------TIGY 287
+ +HR + A NIL+N + KVSDFGL R + D S T T G I Y
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 188
Query: 288 ILLACGGDIYSFSVVLLELV 307
D++S+ +V+ E++
Sbjct: 189 RKFTSASDVWSYGIVMWEVM 208
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 21/167 (12%)
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCE-SHTSTD 280
IA TARG+ +LH + IIHRD+ ++NI L+ED VK+ DFGL S SH
Sbjct: 125 IARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ 181
Query: 281 VAGTIGYIL-----------LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWV 329
++G+I ++ + D+Y+F +VL EL+ + P N +++ V
Sbjct: 182 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYS---NINNRDQIIEMV 238
Query: 330 LDSTILNAYSKPSM---LKMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
++ SK +M +++ C+ RP+ R+ +E+
Sbjct: 239 GRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 21/167 (12%)
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCE-SHTSTD 280
IA TARG+ +LH + IIHRD+ ++NI L+ED VK+ DFGL S SH
Sbjct: 125 IARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ 181
Query: 281 VAGTIGYIL-----------LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWV 329
++G+I ++ + D+Y+F +VL EL+ + P N +++ V
Sbjct: 182 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYS---NINNRDQIIEMV 238
Query: 330 LDSTILNAYSKPSM---LKMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
++ SK +M +++ C+ RP+ R+ +E+
Sbjct: 239 GRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 15/103 (14%)
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCE-SHTSTD 280
IA TA+G+ +LH + IIHRD+ ++NI L+ED VK+ DFGL + S SH
Sbjct: 109 IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 165
Query: 281 VAGTIGYIL-----------LACGGDIYSFSVVLLELVIRKQP 312
++G+I ++ + D+Y+F +VL EL+ + P
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 15/103 (14%)
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCE-SHTSTD 280
IA TA+G+ +LH + IIHRD+ ++NI L+ED VK+ DFGL + S SH
Sbjct: 109 IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 165
Query: 281 VAGTIGYIL-----------LACGGDIYSFSVVLLELVIRKQP 312
++G+I ++ + D+Y+F +VL EL+ + P
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 38/220 (17%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI---------------IACGT 226
+NIV LLG C G L++ EY G L ++LR +A+ + +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 227 ARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA---- 282
A+G+ FL + + IHRD+ A N+LL K+ DFGL R I + ++ A
Sbjct: 170 AQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 226
Query: 283 -----GTIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNA 337
+I + D++S+ ++L E+ P G LV+ + +
Sbjct: 227 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP-------GILVNSKFYKLVKDG 279
Query: 338 Y--SKPSML--KMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
Y ++P+ + I+ C PT RPT ++ FL++
Sbjct: 280 YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 319
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 15/103 (14%)
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCE-SHTSTD 280
IA TA+G+ +LH + IIHRD+ ++NI L+ED VK+ DFGL + S SH
Sbjct: 114 IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 170
Query: 281 VAGTIGYIL-----------LACGGDIYSFSVVLLELVIRKQP 312
++G+I ++ + D+Y+F +VL EL+ + P
Sbjct: 171 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 38/220 (17%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI---------------IACGT 226
+NIV LLG C G L++ EY G L ++LR +A+ + +
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 227 ARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA---- 282
A+G+ FL + + IHRD+ A N+LL K+ DFGL R I + ++ A
Sbjct: 162 AQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 218
Query: 283 -----GTIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNA 337
+I + D++S+ ++L E+ P G LV+ + +
Sbjct: 219 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP-------GILVNSKFYKLVKDG 271
Query: 338 Y--SKPSML--KMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
Y ++P+ + I+ C PT RPT ++ FL++
Sbjct: 272 YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 311
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 15/103 (14%)
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCE-SHTSTD 280
IA TA+G+ +LH + IIHRD+ ++NI L+ED VK+ DFGL + S SH
Sbjct: 111 IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 167
Query: 281 VAGTIGYIL-----------LACGGDIYSFSVVLLELVIRKQP 312
++G+I ++ + D+Y+F +VL EL+ + P
Sbjct: 168 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 15/103 (14%)
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCE-SHTSTD 280
IA TA+G+ +LH + IIHRD+ ++NI L+ED VK+ DFGL + S SH
Sbjct: 136 IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 192
Query: 281 VAGTIGYIL-----------LACGGDIYSFSVVLLELVIRKQP 312
++G+I ++ + D+Y+F +VL EL+ + P
Sbjct: 193 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 15/103 (14%)
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCE-SHTSTD 280
IA TA+G+ +LH + IIHRD+ ++NI L+ED VK+ DFGL + S SH
Sbjct: 137 IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 193
Query: 281 VAGTIGYIL-----------LACGGDIYSFSVVLLELVIRKQP 312
++G+I ++ + D+Y+F +VL EL+ + P
Sbjct: 194 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 15/103 (14%)
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCE-SHTSTD 280
IA TA+G+ +LH + IIHRD+ ++NI L+ED VK+ DFGL + S SH
Sbjct: 114 IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 170
Query: 281 VAGTIGYIL-----------LACGGDIYSFSVVLLELVIRKQP 312
++G+I ++ + D+Y+F +VL EL+ + P
Sbjct: 171 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 55/231 (23%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQA----KHC---------------II 222
KNI+ LLG C ++ EY KG+L ++L+ + ++C ++
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 223 ACG--TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+C ARG+ +L + IHRD+ A N+L+ ED +K++DFGL R I + + T
Sbjct: 154 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT- 209
Query: 281 VAGTIGYILLACGG----------DIYSFSVVLLELVI------RKQPTGPEFKDKNGGN 324
G + +A D++SF V+L E+ P FK G+
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 269
Query: 325 LVDWVLDSTILNAYSKPSML--KMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+D KPS ++ ++ C P+ RPT ++ E L++
Sbjct: 270 RMD------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 308
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 55/231 (23%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQA----KHC---------------II 222
KNI+ LLG C ++ EY KG+L ++L+ + ++C ++
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 223 ACG--TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+C ARG+ +L + IHRD+ A N+L+ ED +K++DFGL R I + + T
Sbjct: 139 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT- 194
Query: 281 VAGTIGYILLACGG----------DIYSFSVVLLELVI------RKQPTGPEFKDKNGGN 324
G + +A D++SF V+L E+ P FK G+
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 254
Query: 325 LVDWVLDSTILNAYSKPSML--KMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+D KPS ++ ++ C P+ RPT ++ E L++
Sbjct: 255 RMD------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 293
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 20/195 (10%)
Query: 199 IVYEYMVKGSLNDWLRNQAK-----HCIIACGTARGITFLHHRFQPHIIHRDINASNILL 253
I E+M GSL+ L+ + ++ +G+T+L + + I+HRD+ SNIL+
Sbjct: 100 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILV 157
Query: 254 NEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL--------LACGGDIYSFSVVLLE 305
N E+K+ DFG+ + D +++ GT Y+ + DI+S + L+E
Sbjct: 158 NSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 214
Query: 306 LVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRPTM- 364
+ + + P G L+D++++ S L+ V C+ NP R +
Sbjct: 215 MAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLK 274
Query: 365 -LRVQEFLEKYHTGE 378
L V F+++ E
Sbjct: 275 QLMVHAFIKRSDAEE 289
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 15/140 (10%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-NQAKHCIIA-CGTARGI-TFLHHRFQP 239
NI++L G +I+ E+M G+L+ +LR N + +I G RGI + + + +
Sbjct: 78 NIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEM 137
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESH-TSTDVAG-----------TIGY 287
+HRD+ A NIL+N + KVSDFGL R + + S T T G I +
Sbjct: 138 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAF 197
Query: 288 ILLACGGDIYSFSVVLLELV 307
D +S+ +V+ E++
Sbjct: 198 RKFTSASDAWSYGIVMWEVM 217
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 182 KNIVQLLGYCP-VGEKKL-IVYEYMVKGSLNDWLRNQ----AKHCIIACGTARGITFLHH 235
++I++ G C GEK L +V EY+ GSL D+L A+ + A G+ +LH
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHS 135
Query: 236 RFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESH--TSTDVAGTIGYILLAC- 292
+ H IHR++ A N+LL+ D VK+ DFGL + + + + D + + C
Sbjct: 136 Q---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 192
Query: 293 -------GGDIYSFSVVLLELV 307
D++SF V L EL+
Sbjct: 193 KEYKFYYASDVWSFGVTLYELL 214
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 51/228 (22%)
Query: 183 NIVQLLGYC--PVGEKKLIVYEYMVKGSLNDWLRNQ-------AKHCIIAC-GTARGITF 232
NIV+L G C PV +V EY GSL + L A H + C ++G+ +
Sbjct: 62 NIVKLYGACLNPV----CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 117
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEV-KVSDFGLVRLISDCESHTSTDVAGTIGYIL-- 289
LH +IHRD+ N+LL V K+ DFG D ++H T+ G+ ++
Sbjct: 118 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA---CDIQTHM-TNNKGSAAWMAPE 173
Query: 290 ------LACGGDIYSFSVVLLELVIRKQP----TGPEFKDKNGGNLVDWVLDSTILNAYS 339
+ D++S+ ++L E++ R++P GP F+ + W + + +
Sbjct: 174 VFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR-------IMWAVHNG-----T 221
Query: 340 KPSMLKML-----QIVVGCIFDNPTTRPTM---LRVQEFLEKYHTGEN 379
+P ++K L ++ C +P+ RP+M +++ L +Y G +
Sbjct: 222 RPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGAD 269
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 19/142 (13%)
Query: 182 KNIVQLLGYCP-VGEKKL-IVYEYMVKGSLNDWLRNQ----AKHCIIACGTARGITFLHH 235
++I++ G C GEK L +V EY+ GSL D+L A+ + A G+ +LH
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHA 135
Query: 236 RFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESH--TSTDVAGTIGYILLAC- 292
+ H IHR++ A N+LL+ D VK+ DFGL + + + + D + + C
Sbjct: 136 Q---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 192
Query: 293 -------GGDIYSFSVVLLELV 307
D++SF V L EL+
Sbjct: 193 KEYKFYYASDVWSFGVTLYELL 214
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 51/228 (22%)
Query: 183 NIVQLLGYC--PVGEKKLIVYEYMVKGSLNDWLRNQ-------AKHCIIAC-GTARGITF 232
NIV+L G C PV +V EY GSL + L A H + C ++G+ +
Sbjct: 63 NIVKLYGACLNPV----CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 118
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEV-KVSDFGLVRLISDCESHTSTDVAGTIGYIL-- 289
LH +IHRD+ N+LL V K+ DFG D ++H T+ G+ ++
Sbjct: 119 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA---CDIQTHM-TNNKGSAAWMAPE 174
Query: 290 ------LACGGDIYSFSVVLLELVIRKQP----TGPEFKDKNGGNLVDWVLDSTILNAYS 339
+ D++S+ ++L E++ R++P GP F+ + W + + +
Sbjct: 175 VFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR-------IMWAVHNG-----T 222
Query: 340 KPSMLKML-----QIVVGCIFDNPTTRPTM---LRVQEFLEKYHTGEN 379
+P ++K L ++ C +P+ RP+M +++ L +Y G +
Sbjct: 223 RPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGAD 270
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 93/221 (42%), Gaps = 36/221 (16%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAK------HCIIACGTARGITFLHH 235
+NIV LLG C G L++ EY G L ++LR +++ IA TA LH
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 236 RFQ----------PHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA--- 282
Q + IHRD+ A N+LL K+ DFGL R I + ++ A
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 283 ------GTIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILN 336
+I + D++S+ ++L E+ P G LV+ + +
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP-------GILVNSKFYKLVKD 282
Query: 337 AY--SKPSML--KMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
Y ++P+ + I+ C PT RPT ++ FL++
Sbjct: 283 GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 323
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 15/140 (10%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-NQAKHCIIA-CGTARGI-TFLHHRFQP 239
NI++L G +I+ E+M G+L+ +LR N + +I G RGI + + + +
Sbjct: 76 NIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEM 135
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCES---HTST---------DVAGTIGY 287
+HRD+ A NIL+N + KVSDFGL R + + S +TS+ I +
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAF 195
Query: 288 ILLACGGDIYSFSVVLLELV 307
D +S+ +V+ E++
Sbjct: 196 RKFTSASDAWSYGIVMWEVM 215
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 93/218 (42%), Gaps = 37/218 (16%)
Query: 183 NIVQLLGYC-PVGEKKLIVYEYMVKGSLNDWLRNQA----------------KHCII-AC 224
N+V LLG C G +++ E+ G+L+ +LR++ +H I +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSF 151
Query: 225 GTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA-- 282
A+G+ FL R IHRD+ A NILL+E VK+ DFGL R I + A
Sbjct: 152 QVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 283 -------GTIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTIL 335
TI + D++SF V+L E+ P K + + T +
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFXRRLKEGTRM 266
Query: 336 NA--YSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFL 371
A Y+ P +M Q ++ C P+ RPT + E L
Sbjct: 267 RAPDYTTP---EMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 15/103 (14%)
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCE-SHTSTD 280
IA TA+G+ +LH + IIHRD+ ++NI L+ED VK+ DFGL S SH
Sbjct: 109 IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ 165
Query: 281 VAGTIGYIL-----------LACGGDIYSFSVVLLELVIRKQP 312
++G+I ++ + D+Y+F +VL EL+ + P
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAK---------HCIIACGTARG 229
++ +V+ G C IV EY+ G L ++LR+ K C C G
Sbjct: 60 LSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVC---EG 116
Query: 230 ITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTST--------D 280
+ FL H+F IHRD+ A N L++ D VKVSDFG+ R + D + +S
Sbjct: 117 MAFLESHQF----IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWS 172
Query: 281 VAGTIGYILLACGGDIYSFSVVLLELV-IRKQPTGPEFKDKNGGNLVDWVLDSTILNAYS 339
Y + D+++F +++ E+ + K P D + V VL + +
Sbjct: 173 APEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPY-----DLYTNSEV--VLKVSQGHRLY 225
Query: 340 KPSMLK--MLQIVVGCIFDNPTTRPTMLRVQEFLE 372
+P + + QI+ C + P RPT ++ +E
Sbjct: 226 RPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIE 260
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 35/156 (22%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-------------------AKHCII 222
KNI+ LLG C ++ EY KG+L ++L+ + + ++
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 223 ACG--TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+C ARG+ +L + IHRD+ A N+L+ ED +K++DFGL R I + + T
Sbjct: 195 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT- 250
Query: 281 VAGTIGYILLACGG----------DIYSFSVVLLEL 306
G + +A D++SF V+L E+
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 286
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 25/145 (17%)
Query: 182 KNIVQLLGYCP-VGEKKL-IVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITF 232
++IV+ G C GEK + +V EY+ GSL D+L +HC+ A G+ +
Sbjct: 70 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQICEGMAY 126
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESH--TSTDVAGTIGYILL 290
LH + H IHR + A N+LL+ D VK+ DFGL + + + + D + +
Sbjct: 127 LHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 183
Query: 291 AC--------GGDIYSFSVVLLELV 307
C D++SF V L EL+
Sbjct: 184 ECLKECKFYYASDVWSFGVTLYELL 208
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 25/145 (17%)
Query: 182 KNIVQLLGYCP-VGEKKL-IVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITF 232
++IV+ G C GEK + +V EY+ GSL D+L +HC+ A G+ +
Sbjct: 71 EHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQICEGMAY 127
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESH--TSTDVAGTIGYILL 290
LH + H IHR + A N+LL+ D VK+ DFGL + + + + D + +
Sbjct: 128 LHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 184
Query: 291 AC--------GGDIYSFSVVLLELV 307
C D++SF V L EL+
Sbjct: 185 ECLKECKFYYASDVWSFGVTLYELL 209
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 42/197 (21%)
Query: 155 TYDQIVAGTNKFYEKNVIRGDDF--------GIAFKNIVQLLGYCPVGEKKLIVYEYMVK 206
T D+++ + + DF + ++IV+ G C G+ ++V+EYM
Sbjct: 42 TKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKH 101
Query: 207 GSLNDWLR--------------NQAKHCI-------IACGTARGITFLHHRFQPHIIHRD 245
G LN +LR QAK + IA A G+ +L + H +HRD
Sbjct: 102 GDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRD 158
Query: 246 INASNILLNEDFEVKVSDFGLVRLISDCE-----SHTSTDV----AGTIGYILLACGGDI 296
+ N L+ + VK+ DFG+ R + + HT + +I Y D+
Sbjct: 159 LATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDV 218
Query: 297 YSFSVVLLELVIR-KQP 312
+SF V+L E+ KQP
Sbjct: 219 WSFGVILWEIFTYGKQP 235
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 15/103 (14%)
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCE-SHTSTD 280
IA TA+G+ +LH + IIHRD+ ++NI L+ED VK+ DFGL S SH
Sbjct: 129 IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ 185
Query: 281 VAGTIGYIL-----------LACGGDIYSFSVVLLELVIRKQP 312
++G+I ++ + D+Y+F +VL EL+ + P
Sbjct: 186 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 55/231 (23%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-------------------AKHCII 222
KNI+ LLG C ++ EY KG+L ++L+ + + ++
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 223 ACG--TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+C ARG+ +L + IHRD+ A N+L+ ED +K++DFGL R I + + T
Sbjct: 154 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT- 209
Query: 281 VAGTIGYILLACGG----------DIYSFSVVLLELVI------RKQPTGPEFKDKNGGN 324
G + +A D++SF V+L E+ P FK G+
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 269
Query: 325 LVDWVLDSTILNAYSKPSML--KMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+D KPS ++ ++ C P+ RPT ++ E L++
Sbjct: 270 RMD------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 308
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 35/156 (22%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-------------------AKHCII 222
KNI+ LLG C ++ EY KG+L ++L+ + + ++
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 223 ACG--TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+C ARG+ +L + IHRD+ A N+L+ ED +K++DFGL R I + + T
Sbjct: 154 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT- 209
Query: 281 VAGTIGYILLACGG----------DIYSFSVVLLEL 306
G + +A D++SF V+L E+
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 35/156 (22%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-------------------AKHCII 222
KNI+ LLG C ++ EY KG+L ++L+ + + ++
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 223 ACG--TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+C ARG+ +L + IHRD+ A N+L+ ED +K++DFGL R I + + T
Sbjct: 143 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT- 198
Query: 281 VAGTIGYILLACGG----------DIYSFSVVLLEL 306
G + +A D++SF V+L E+
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 234
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 35/156 (22%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-------------------AKHCII 222
KNI+ LLG C ++ EY KG+L ++L+ + + ++
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 223 ACG--TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+C ARG+ +L + IHRD+ A N+L+ ED +K++DFGL R I + + T
Sbjct: 146 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT- 201
Query: 281 VAGTIGYILLACGG----------DIYSFSVVLLEL 306
G + +A D++SF V+L E+
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 237
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 15/103 (14%)
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCE-SHTSTD 280
IA TA+G+ +LH + IIHRD+ ++NI L+ED VK+ DFGL S SH
Sbjct: 137 IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ 193
Query: 281 VAGTIGYIL-----------LACGGDIYSFSVVLLELVIRKQP 312
++G+I ++ + D+Y+F +VL EL+ + P
Sbjct: 194 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 35/156 (22%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-------------------AKHCII 222
KNI+ LLG C ++ EY KG+L ++L+ + + ++
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 223 ACG--TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+C ARG+ +L + IHRD+ A N+L+ ED +K++DFGL R I + + T
Sbjct: 147 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT- 202
Query: 281 VAGTIGYILLACGG----------DIYSFSVVLLEL 306
G + +A D++SF V+L E+
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 238
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 35/156 (22%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-------------------AKHCII 222
KNI+ LLG C ++ EY KG+L ++L+ + + ++
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 223 ACG--TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+C ARG+ +L + IHRD+ A N+L+ ED +K++DFGL R I + T
Sbjct: 154 SCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT- 209
Query: 281 VAGTIGYILLACGG----------DIYSFSVVLLEL 306
G + +A D++SF V+L E+
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 93/218 (42%), Gaps = 37/218 (16%)
Query: 183 NIVQLLGYC-PVGEKKLIVYEYMVKGSLNDWLRNQA----------------KHCII-AC 224
N+V LLG C G +++ E+ G+L+ +LR++ +H I +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSF 151
Query: 225 GTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA-- 282
A+G+ FL R IHRD+ A NILL+E VK+ DFGL R I + A
Sbjct: 152 QVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 283 -------GTIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTIL 335
TI + D++SF V+L E+ P K + + T +
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKEGTRM 266
Query: 336 NA--YSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFL 371
A Y+ P +M Q ++ C P+ RPT + E L
Sbjct: 267 RAPDYTTP---EMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 26/201 (12%)
Query: 199 IVYEYMVKGSLNDWLRNQAK-----HCIIACGTARGITFLHHRFQPHIIHRDINASNILL 253
I E+M GSL+ L+ + ++ +G+T+L + + I+HRD+ SNIL+
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILV 138
Query: 254 NEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL--------LACGGDIYSFSVVLLE 305
N E+K+ DFG+ + D +++ GT Y+ + DI+S + L+E
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
Query: 306 LVIRKQPTGPEFKDKNGG------NLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPT 359
+ + + P P ++ L+D++++ S L+ V C+ NP
Sbjct: 196 MAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPA 255
Query: 360 TRPTM--LRVQEFLEKYHTGE 378
R + L V F+++ E
Sbjct: 256 ERADLKQLMVHAFIKRSDAEE 276
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 28/197 (14%)
Query: 199 IVYEYMVKGSLNDWLRNQAK-----HCIIACGTARGITFLHHRFQPHIIHRDINASNILL 253
I E+M GSL+ L+ + ++ +G+T+L + + I+HRD+ SNIL+
Sbjct: 84 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILV 141
Query: 254 NEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL--------LACGGDIYSFSVVLLE 305
N E+K+ DFG+ + D + + GT Y+ + DI+S + L+E
Sbjct: 142 NSRGEIKLCDFGVSGQLID---EMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 198
Query: 306 LVIRKQPTGPE--FKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRPT 363
+ + + P P F+ L+D++++ S L+ V C+ NP R
Sbjct: 199 MAVGRYPRPPMAIFE------LLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERAD 252
Query: 364 M--LRVQEFLEKYHTGE 378
+ L V F+++ E
Sbjct: 253 LKQLMVHAFIKRSDAEE 269
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 90/227 (39%), Gaps = 46/227 (20%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT---------------- 226
NIV LLG C +G L++ EY G L ++LR + I + +
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 227 -------ARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTST 279
A+G+ FL + + IHRD+ A NILL K+ DFGL R I + ++
Sbjct: 171 LSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 280 DVA---------GTIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVL 330
A +I + D++S+ + L EL P G VD
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-------GMPVDSKF 280
Query: 331 DSTILNAYS----KPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
I + + + +M I+ C +P RPT ++ + +EK
Sbjct: 281 YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 95/220 (43%), Gaps = 39/220 (17%)
Query: 183 NIVQLLGYC-PVGEKKLIVYEYMVKGSLNDWLRNQA------------------KHCII- 222
N+V LLG C G +++ E+ G+L+ +LR++ +H I
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXY 153
Query: 223 ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLI-SDCESHTSTDV 281
+ A+G+ FL R IHRD+ A NILL+E VK+ DFGL R I D + D
Sbjct: 154 SFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 282 AGTIGYI--------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDST 333
+ ++ + D++SF V+L E+ P K + + T
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKEGT 268
Query: 334 ILNA--YSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFL 371
+ A Y+ P +M Q ++ C P+ RPT + E L
Sbjct: 269 RMRAPDYTTP---EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 90/227 (39%), Gaps = 46/227 (20%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT---------------- 226
NIV LLG C +G L++ EY G L ++LR + I + +
Sbjct: 106 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 165
Query: 227 -------ARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTST 279
A+G+ FL + + IHRD+ A NILL K+ DFGL R I + ++
Sbjct: 166 LSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 280 DVA---------GTIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVL 330
A +I + D++S+ + L EL P G VD
Sbjct: 223 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-------GMPVDSKF 275
Query: 331 DSTILNAYS----KPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
I + + + +M I+ C +P RPT ++ + +EK
Sbjct: 276 YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 322
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 90/227 (39%), Gaps = 46/227 (20%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT---------------- 226
NIV LLG C +G L++ EY G L ++LR + I + +
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 227 -------ARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTST 279
A+G+ FL + + IHRD+ A NILL K+ DFGL R I + ++
Sbjct: 171 LSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 280 DVA---------GTIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVL 330
A +I + D++S+ + L EL P G VD
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-------GMPVDSKF 280
Query: 331 DSTILNAYS----KPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
I + + + +M I+ C +P RPT ++ + +EK
Sbjct: 281 YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 90/227 (39%), Gaps = 46/227 (20%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT---------------- 226
NIV LLG C +G L++ EY G L ++LR + I + +
Sbjct: 104 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 163
Query: 227 -------ARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTST 279
A+G+ FL + + IHRD+ A NILL K+ DFGL R I + ++
Sbjct: 164 LSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 280 DVA---------GTIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVL 330
A +I + D++S+ + L EL P G VD
Sbjct: 221 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-------GMPVDSKF 273
Query: 331 DSTILNAYS----KPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
I + + + +M I+ C +P RPT ++ + +EK
Sbjct: 274 YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 320
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 42/224 (18%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAK------HCIIACGT--------- 226
+NIV LLG C G L++ EY G L ++LR +++ IA T
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 227 ----ARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA 282
A+G+ FL + + IHRD+ A N+LL K+ DFGL R I + ++ A
Sbjct: 170 SSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 283 ---------GTIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDST 333
+I + D++S+ ++L E+ P G LV+
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP-------GILVNSKFYKL 279
Query: 334 ILNAY--SKPSML--KMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+ + Y ++P+ + I+ C PT RPT ++ FL++
Sbjct: 280 VKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 323
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 90/227 (39%), Gaps = 46/227 (20%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT---------------- 226
NIV LLG C +G L++ EY G L ++LR + I + +
Sbjct: 88 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147
Query: 227 -------ARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTST 279
A+G+ FL + + IHRD+ A NILL K+ DFGL R I + ++
Sbjct: 148 LSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 280 DVA---------GTIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVL 330
A +I + D++S+ + L EL P G VD
Sbjct: 205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-------GMPVDSKF 257
Query: 331 DSTILNAYS----KPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
I + + + +M I+ C +P RPT ++ + +EK
Sbjct: 258 YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 19/142 (13%)
Query: 182 KNIVQLLGYCP-VGEKKL-IVYEYMVKGSLNDWLRNQ----AKHCIIACGTARGITFLHH 235
++I++ G C G L +V EY+ GSL D+L A+ + A G+ +LH
Sbjct: 93 EHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHA 152
Query: 236 RFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCES--HTSTDVAGTIGYILLAC- 292
+ H IHRD+ A N+LL+ D VK+ DFGL + + + D + + C
Sbjct: 153 Q---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECL 209
Query: 293 -------GGDIYSFSVVLLELV 307
D++SF V L EL+
Sbjct: 210 KEYKFYYASDVWSFGVTLYELL 231
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 35/156 (22%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAK-------------------HCII 222
KNI+ LLG C ++ EY KG+L ++LR + ++
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 223 ACG--TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+C ARG+ +L + IHRD+ A N+L+ E+ +K++DFGL R I++ + + T
Sbjct: 148 SCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKT- 203
Query: 281 VAGTIGYILLACGG----------DIYSFSVVLLEL 306
G + +A D++SF V++ E+
Sbjct: 204 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 239
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 67/164 (40%), Gaps = 39/164 (23%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHC--------------------I 221
++IV+ G C G L+V+EYM G LN +LR+
Sbjct: 103 QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 162
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDV 281
+A A G+ +L H +HRD+ N L+ + VK+ DFG+ R D S V
Sbjct: 163 VASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSR---DIYSTDYYRV 216
Query: 282 AG------------TIGYILLACGGDIYSFSVVLLEL-VIRKQP 312
G +I Y D++SF VVL E+ KQP
Sbjct: 217 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 35/156 (22%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAK-------------------HCII 222
KNI+ LLG C ++ EY KG+L ++LR + ++
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 223 ACG--TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+C ARG+ +L + IHRD+ A N+L+ E+ +K++DFGL R I++ + + +T
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT- 216
Query: 281 VAGTIGYILLACGG----------DIYSFSVVLLEL 306
G + +A D++SF V++ E+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 67/164 (40%), Gaps = 39/164 (23%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHC--------------------I 221
++IV+ G C G L+V+EYM G LN +LR+
Sbjct: 80 QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 139
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDV 281
+A A G+ +L H +HRD+ N L+ + VK+ DFG+ R D S V
Sbjct: 140 VASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSR---DIYSTDYYRV 193
Query: 282 AG------------TIGYILLACGGDIYSFSVVLLELVIR-KQP 312
G +I Y D++SF VVL E+ KQP
Sbjct: 194 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 35/156 (22%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAK-------------------HCII 222
KNI+ LLG C ++ EY KG+L ++LR + ++
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 223 ACG--TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+C ARG+ +L + IHRD+ A N+L+ E+ +K++DFGL R I++ + + T
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT- 216
Query: 281 VAGTIGYILLACGG----------DIYSFSVVLLEL 306
G + +A D++SF V++ E+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 67/164 (40%), Gaps = 39/164 (23%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHC--------------------I 221
++IV+ G C G L+V+EYM G LN +LR+
Sbjct: 74 QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 133
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDV 281
+A A G+ +L H +HRD+ N L+ + VK+ DFG+ R D S V
Sbjct: 134 VASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSR---DIYSTDYYRV 187
Query: 282 AG------------TIGYILLACGGDIYSFSVVLLELVIR-KQP 312
G +I Y D++SF VVL E+ KQP
Sbjct: 188 GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 35/156 (22%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAK-------------------HCII 222
KNI+ LLG C ++ EY KG+L ++LR + ++
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 223 ACG--TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+C ARG+ +L + IHRD+ A N+L+ E+ +K++DFGL R I++ + + T
Sbjct: 207 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT- 262
Query: 281 VAGTIGYILLACGG----------DIYSFSVVLLEL 306
G + +A D++SF V++ E+
Sbjct: 263 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 40/221 (18%)
Query: 183 NIVQLLGYC-PVGEKKLIVYEYMVKGSLNDWLRNQA-------------------KHCII 222
N+V LLG C G +++ E+ G+L+ +LR++ +H I
Sbjct: 93 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLIC 152
Query: 223 -ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLI-SDCESHTSTD 280
+ A+G+ FL R IHRD+ A NILL+E VK+ DFGL R I D + D
Sbjct: 153 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 281 VAGTIGYI--------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDS 332
+ ++ + D++SF V+L E+ P K + +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKEG 267
Query: 333 TILNA--YSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFL 371
T + A Y+ P +M Q ++ C P+ RPT + E L
Sbjct: 268 TRMRAPDYTTP---EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 35/156 (22%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAK-------------------HCII 222
KNI+ LLG C ++ EY KG+L ++LR + ++
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 223 ACG--TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+C ARG+ +L + IHRD+ A N+L+ E+ +K++DFGL R I++ + + T
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT- 216
Query: 281 VAGTIGYILLACGG----------DIYSFSVVLLEL 306
G + +A D++SF V++ E+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 35/156 (22%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAK-------------------HCII 222
KNI+ LLG C ++ EY KG+L ++LR + ++
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 223 ACG--TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+C ARG+ +L + IHRD+ A N+L+ E+ +K++DFGL R I++ + + T
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT- 216
Query: 281 VAGTIGYILLACGG----------DIYSFSVVLLEL 306
G + +A D++SF V++ E+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 41/222 (18%)
Query: 183 NIVQLLGYC-PVGEKKLIVYEYMVKGSLNDWLRNQA--------------------KHCI 221
N+V LLG C G +++ E+ G+L+ +LR++ +H I
Sbjct: 83 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 222 I-ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLI-SDCESHTST 279
+ A+G+ FL R IHRD+ A NILL+E VK+ DFGL R I D +
Sbjct: 143 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 280 DVAGTIGYI--------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLD 331
D + ++ + D++SF V+L E+ P K + +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKE 257
Query: 332 STILNA--YSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFL 371
T + A Y+ P +M Q ++ C P+ RPT + E L
Sbjct: 258 GTRMRAPDYTTP---EMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 35/156 (22%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAK-------------------HCII 222
KNI+ LLG C ++ EY KG+L ++LR + ++
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 223 ACG--TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+C ARG+ +L + IHRD+ A N+L+ E+ +K++DFGL R I++ + + T
Sbjct: 153 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT- 208
Query: 281 VAGTIGYILLACGG----------DIYSFSVVLLEL 306
G + +A D++SF V++ E+
Sbjct: 209 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 244
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 35/156 (22%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAK-------------------HCII 222
KNI+ LLG C ++ EY KG+L ++LR + ++
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 223 ACG--TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+C ARG+ +L + IHRD+ A N+L+ E+ +K++DFGL R I++ + + T
Sbjct: 150 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT- 205
Query: 281 VAGTIGYILLACGG----------DIYSFSVVLLEL 306
G + +A D++SF V++ E+
Sbjct: 206 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 241
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 93/222 (41%), Gaps = 41/222 (18%)
Query: 183 NIVQLLGYC-PVGEKKLIVYEYMVKGSLNDWLRNQA--------------------KHCI 221
N+V LLG C G +++ E+ G+L+ +LR++ +H I
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLI 153
Query: 222 I-ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+ A+G+ FL R IHRD+ A NILL+E VK+ DFGL R I +
Sbjct: 154 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 281 VA---------GTIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLD 331
A TI + D++SF V+L E+ P K + +
Sbjct: 211 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKE 268
Query: 332 STILNA--YSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFL 371
T + A Y+ P +M Q ++ C P+ RPT + E L
Sbjct: 269 GTRMRAPDYTTP---EMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 41/222 (18%)
Query: 183 NIVQLLGYC-PVGEKKLIVYEYMVKGSLNDWLRNQA--------------------KHCI 221
N+V LLG C G +++ E+ G+L+ +LR++ +H I
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 222 I-ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLI-SDCESHTST 279
+ A+G+ FL R IHRD+ A NILL+E VK+ DFGL R I D +
Sbjct: 152 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 280 DVAGTIGYI--------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLD 331
D + ++ + D++SF V+L E+ P K + +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKE 266
Query: 332 STILNA--YSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFL 371
T + A Y+ P +M Q ++ C P+ RPT + E L
Sbjct: 267 GTRMRAPDYTTP---EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 93/222 (41%), Gaps = 41/222 (18%)
Query: 183 NIVQLLGYC-PVGEKKLIVYEYMVKGSLNDWLRNQA--------------------KHCI 221
N+V LLG C G +++ E+ G+L+ +LR++ +H I
Sbjct: 129 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 188
Query: 222 I-ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+ A+G+ FL R IHRD+ A NILL+E VK+ DFGL R I +
Sbjct: 189 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 281 VA---------GTIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLD 331
A TI + D++SF V+L E+ P K + +
Sbjct: 246 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKE 303
Query: 332 STILNA--YSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFL 371
T + A Y+ P +M Q ++ C P+ RPT + E L
Sbjct: 304 GTRMRAPDYTTP---EMYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 41/222 (18%)
Query: 183 NIVQLLGYC-PVGEKKLIVYEYMVKGSLNDWLRNQA--------------------KHCI 221
N+V LLG C G +++ E+ G+L+ +LR++ +H I
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 222 I-ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLI-SDCESHTST 279
+ A+G+ FL R IHRD+ A NILL+E VK+ DFGL R I D +
Sbjct: 143 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 280 DVAGTIGYI--------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLD 331
D + ++ + D++SF V+L E+ P K + +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKE 257
Query: 332 STILNA--YSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFL 371
T + A Y+ P +M Q ++ C P+ RPT + E L
Sbjct: 258 GTRMRAPDYTTP---EMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 35/156 (22%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAK-------------------HCII 222
KNI+ LLG C ++ EY KG+L ++LR + ++
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 223 ACG--TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+C ARG+ +L + IHRD+ A N+L+ E+ +K++DFGL R I++ + T
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT- 216
Query: 281 VAGTIGYILLACGG----------DIYSFSVVLLEL 306
G + +A D++SF V++ E+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 41/222 (18%)
Query: 183 NIVQLLGYC-PVGEKKLIVYEYMVKGSLNDWLRNQA--------------------KHCI 221
N+V LLG C G +++ E+ G+L+ +LR++ +H I
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 222 I-ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLI-SDCESHTST 279
+ A+G+ FL R IHRD+ A NILL+E VK+ DFGL R I D +
Sbjct: 152 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKG 208
Query: 280 DVAGTIGYI--------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLD 331
D + ++ + D++SF V+L E+ P K + +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKE 266
Query: 332 STILNA--YSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFL 371
T + A Y+ P +M Q ++ C P+ RPT + E L
Sbjct: 267 GTRMRAPDYTTP---EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 93/222 (41%), Gaps = 41/222 (18%)
Query: 183 NIVQLLGYC-PVGEKKLIVYEYMVKGSLNDWLRNQA--------------------KHCI 221
N+V LLG C G +++ E+ G+L+ +LR++ +H I
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 222 I-ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+ A+G+ FL R IHRD+ A NILL+E VK+ DFGL R I +
Sbjct: 152 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 208
Query: 281 VA---------GTIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLD 331
A TI + D++SF V+L E+ P K + +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKE 266
Query: 332 STILNA--YSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFL 371
T + A Y+ P +M Q ++ C P+ RPT + E L
Sbjct: 267 GTRMRAPDYTTP---EMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 35/156 (22%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAK-------------------HCII 222
KNI+ LLG C ++ EY KG+L ++LR + ++
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 223 ACG--TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+C ARG+ +L + IHRD+ A N+L+ E+ +K++DFGL R I++ + T
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT- 216
Query: 281 VAGTIGYILLACGG----------DIYSFSVVLLEL 306
G + +A D++SF V++ E+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 93/222 (41%), Gaps = 41/222 (18%)
Query: 183 NIVQLLGYC-PVGEKKLIVYEYMVKGSLNDWLRNQA--------------------KHCI 221
N+V LLG C G +++ E+ G+L+ +LR++ +H I
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 222 I-ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+ A+G+ FL R IHRD+ A NILL+E VK+ DFGL R I +
Sbjct: 143 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 281 VA---------GTIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLD 331
A TI + D++SF V+L E+ P K + +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKE 257
Query: 332 STILNA--YSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFL 371
T + A Y+ P +M Q ++ C P+ RPT + E L
Sbjct: 258 GTRMRAPDYTTP---EMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 93/222 (41%), Gaps = 41/222 (18%)
Query: 183 NIVQLLGYC-PVGEKKLIVYEYMVKGSLNDWLRNQA--------------------KHCI 221
N+V LLG C G +++ E+ G+L+ +LR++ +H I
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 222 I-ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+ A+G+ FL R IHRD+ A NILL+E VK+ DFGL R I +
Sbjct: 143 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 281 VA---------GTIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLD 331
A TI + D++SF V+L E+ P K + +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKE 257
Query: 332 STILNA--YSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFL 371
T + A Y+ P +M Q ++ C P+ RPT + E L
Sbjct: 258 GTRMRAPDYTTP---EMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 83/206 (40%), Gaps = 36/206 (17%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHCIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFE 258
I+ + KG + +++ I G+ +LH Q IHRD+ A NILL ED
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGS 159
Query: 259 VKVSDFGLVRLISDCESHTSTDVAGTI----------------GYILLACGGDIYSFSVV 302
V+++DFG+ ++ T V T GY A DI+SF +
Sbjct: 160 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKA---DIWSFGIT 216
Query: 303 LLELVIRKQP--TGPEFK------DKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCI 354
+EL P P K + +L V D +L Y K S KM+ + C+
Sbjct: 217 AIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGK-SFRKMISL---CL 272
Query: 355 FDNPTTRPTMLRV--QEFLEKYHTGE 378
+P RPT + +F +K E
Sbjct: 273 QKDPEKRPTAAELLRHKFFQKAKNKE 298
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 16/142 (11%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----NQAKHCIIACGTARGITFLHHRFQ 238
NIV L VG++ +V EY+ GSL D + ++ + + + + FLH
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN-- 135
Query: 239 PHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL------LAC 292
+IHRDI + NILL D VK++DFG I+ +S ST V GT ++ A
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAY 193
Query: 293 GG--DIYSFSVVLLELVIRKQP 312
G DI+S ++ +E++ + P
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 35/156 (22%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAK-------------------HCII 222
KNI+ LLG C ++ EY KG+L ++LR + ++
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 223 ACG--TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+C ARG+ +L + IHRD+ A N+L+ E+ ++++DFGL R I++ + + T
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKT- 216
Query: 281 VAGTIGYILLACGG----------DIYSFSVVLLEL 306
G + +A D++SF V++ E+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 29/187 (15%)
Query: 199 IVYEYMVKGSLNDWLRNQAKH------CIIACGTARGITFLHHRFQPHIIHRDINASNIL 252
IV EY GS++D +R + K I T +G+ +LH + IHRDI A NIL
Sbjct: 101 IVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNIL 157
Query: 253 LNEDFEVKVSDFGLVRLISDCESHT----------STDVAGTIGYILLACGGDIYSFSVV 302
LN + K++DFG+ ++D + + +V IGY C DI+S +
Sbjct: 158 LNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGY---NCVADIWSLGIT 214
Query: 303 LLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK--MLQIVVGCIFDNPTT 360
+E+ K P + D + + +++ + + KP + V C+ +P
Sbjct: 215 AIEMAEGK----PPYADIHPMRAI-FMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQ 269
Query: 361 RPTMLRV 367
R T ++
Sbjct: 270 RATATQL 276
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 51/233 (21%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------------------- 221
+NIV LLG C G L++ EY G L ++LR +A+ +
Sbjct: 95 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 222 --------IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDC 273
+ A+G+ FL + + IHRD+ A N+LL K+ DFGL R I +
Sbjct: 155 LELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
Query: 274 ESHTSTDVA---------GTIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGN 324
++ A +I + D++S+ ++L E+ P G
Sbjct: 212 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP-------GI 264
Query: 325 LVDWVLDSTILNAY--SKPSML--KMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
LV+ + + Y ++P+ + I+ C PT RPT ++ FL++
Sbjct: 265 LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 317
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 21/210 (10%)
Query: 184 IVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----NQAKHCIIACGTARGITFLHHRFQP 239
I + G K I+ EY+ GS D L+ + I +G+ +LH +
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERK- 137
Query: 240 HIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG-------TIGYILLAC 292
IHRDI A+N+LL+E +VK++DFG+ ++D + + V I
Sbjct: 138 --IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDF 195
Query: 293 GGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVG 352
DI+S + +EL + +P + L+ T+ +SKP + V
Sbjct: 196 KADIWSLGITAIELA-KGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSKP----FKEFVEA 250
Query: 353 CIFDNPTTRPTM--LRVQEFLEKYHTGENF 380
C+ +P RPT L +F+ +Y +F
Sbjct: 251 CLNKDPRFRPTAKELLKHKFITRYTKKTSF 280
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 82/201 (40%), Gaps = 36/201 (17%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHCIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFE 258
I+ + KG + +++ I G+ +LH Q IHRD+ A NILL ED
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGS 154
Query: 259 VKVSDFGLVRLISDCESHTSTDVAGTI----------------GYILLACGGDIYSFSVV 302
V+++DFG+ ++ T V T GY A DI+SF +
Sbjct: 155 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKA---DIWSFGIT 211
Query: 303 LLELVIRKQP--TGPEFK------DKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCI 354
+EL P P K + +L V D +L Y K S KM+ + C+
Sbjct: 212 AIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGK-SFRKMISL---CL 267
Query: 355 FDNPTTRPTMLRV--QEFLEK 373
+P RPT + +F +K
Sbjct: 268 QKDPEKRPTAAELLRHKFFQK 288
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 19/181 (10%)
Query: 194 GEKKLIVYEYMVKGSLNDWLR----NQAKHCIIACGTARGITFLHHRFQPHIIHRDINAS 249
G K I+ EY+ GS D LR ++ + + +G+ +LH + IHRDI A+
Sbjct: 93 GSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKK---IHRDIKAA 149
Query: 250 NILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG-------TIGYILLACGGDIYSFSVV 302
N+LL+E +VK++DFG+ ++D + +T V I DI+S +
Sbjct: 150 NVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGIT 209
Query: 303 LLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRP 362
+EL + +P + L+ T++ ++K + + C+ +P+ RP
Sbjct: 210 AIELA-KGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTK----SFKEFIDACLNKDPSFRP 264
Query: 363 T 363
T
Sbjct: 265 T 265
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 98/219 (44%), Gaps = 37/219 (16%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ------AKHCIIACGTARGITFLHHR 236
N+++ +G ++ + EY+ G+L +++ ++ A A G+ +LH
Sbjct: 68 NVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM 127
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS--------------TDVA 282
+IIHRD+N+ N L+ E+ V V+DFGL RL+ D ++ T V
Sbjct: 128 ---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVG 184
Query: 283 GTIGYILLACGG-------DIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLD-STI 334
G D++SF +VL E++ R P++ + +D+ L+
Sbjct: 185 NPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVN-ADPDYLPRT----MDFGLNVRGF 239
Query: 335 LNAYSKPSM-LKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
L+ Y P+ I V C +P RP+ ++++ +LE
Sbjct: 240 LDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 23/167 (13%)
Query: 183 NIVQLLGYC-PVGEKKL-IVYEYMVKGSLNDWLRNQAK---HCIIACGTARGITFLHHRF 237
NIV+ G C G + L ++ EY+ GSL D+L+ A+ H + T++ + +
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLG 134
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGY 287
IHRD+ NIL+ + VK+ DFGL +++ + G ++
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 288 ILLACGGDIYSFSVVLLELV--IRKQPTGP-EF-----KDKNGGNLV 326
+ D++SF VVL EL I K + P EF DK G +V
Sbjct: 195 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 241
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 46/219 (21%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHCI----IACGTARGITFLH-----HRFQPHIIHRDINAS 249
++ Y GSL D+L+ + I A G+ LH + +P I HRD+ +
Sbjct: 83 LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSK 142
Query: 250 NILLNEDFEVKVSDFGLVRLISDCESHTSTDVA-----GTIGY---------ILLACGG- 294
NIL+ ++ + ++D GL + S +S DV GT Y I + C
Sbjct: 143 NILVKKNGQCCIADLGLAVMHS--QSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDS 200
Query: 295 ----DIYSFSVVLLELVIRKQ----------------PTGPEFKDKNGGNLVDWVLDSTI 334
DI++F +VL E+ R P P F+D VD +
Sbjct: 201 YKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIP 260
Query: 335 LNAYSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+S P++ + +++ C + NP+ R T LR+++ L K
Sbjct: 261 NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 46/219 (21%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHCI----IACGTARGITFLH-----HRFQPHIIHRDINAS 249
++ Y GSL D+L+ + I A G+ LH + +P I HRD+ +
Sbjct: 83 LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSK 142
Query: 250 NILLNEDFEVKVSDFGLVRLISDCESHTSTDVA-----GTIGY---------ILLACGG- 294
NIL+ ++ + ++D GL + S +S DV GT Y I + C
Sbjct: 143 NILVKKNGQCCIADLGLAVMHS--QSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDS 200
Query: 295 ----DIYSFSVVLLELVIRKQ----------------PTGPEFKDKNGGNLVDWVLDSTI 334
DI++F +VL E+ R P P F+D VD +
Sbjct: 201 YKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIP 260
Query: 335 LNAYSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+S P++ + +++ C + NP+ R T LR+++ L K
Sbjct: 261 NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 16/142 (11%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----NQAKHCIIACGTARGITFLHHRFQ 238
NIV L VG++ +V EY+ GSL D + ++ + + + + FLH
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN-- 135
Query: 239 PHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL------LAC 292
+IHRDI + NILL D VK++DFG I+ +S S ++ GT ++ A
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS-EMVGTPYWMAPEVVTRKAY 193
Query: 293 GG--DIYSFSVVLLELVIRKQP 312
G DI+S ++ +E++ + P
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 93/226 (41%), Gaps = 44/226 (19%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------------------- 221
+NIV LLG C G L++ EY G L ++LR + +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 222 -IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+ A+G+ FL + + IHRD+ A N+LL K+ DFGL R I + ++
Sbjct: 170 HFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 226
Query: 281 VA---------GTIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLD 331
A +I + D++S+ ++L E+ P G LV+
Sbjct: 227 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP-------GILVNSKFY 279
Query: 332 STILNAY--SKPSML--KMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+ + Y ++P+ + I+ C PT RPT ++ FL++
Sbjct: 280 KLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 325
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 46/219 (21%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHCI----IACGTARGITFLH-----HRFQPHIIHRDINAS 249
++ Y GSL D+L+ + I A G+ LH + +P I HRD+ +
Sbjct: 112 LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSK 171
Query: 250 NILLNEDFEVKVSDFGLVRLISDCESHTSTDVA-----GTIGY---------ILLACGG- 294
NIL+ ++ + ++D GL + S +S DV GT Y I + C
Sbjct: 172 NILVKKNGQCCIADLGLAVMHS--QSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDS 229
Query: 295 ----DIYSFSVVLLELVIRKQ----------------PTGPEFKDKNGGNLVDWVLDSTI 334
DI++F +VL E+ R P P F+D VD +
Sbjct: 230 YKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIP 289
Query: 335 LNAYSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+S P++ + +++ C + NP+ R T LR+++ L K
Sbjct: 290 NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 328
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 27/147 (18%)
Query: 182 KNIVQLLGYCPV--GEKKLIVYEYMVKGSLNDWL---------RNQAKHCIIACGTARGI 230
+NIV+ G C G ++ E++ GSL ++L + Q K+ + C +G+
Sbjct: 83 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC---KGM 139
Query: 231 TFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLI-SDCESHT-STDVAGTIGYI 288
+L R +HRD+ A N+L+ + +VK+ DFGL + I +D E T D + +
Sbjct: 140 DYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY 196
Query: 289 LLAC--------GGDIYSFSVVLLELV 307
C D++SF V L EL+
Sbjct: 197 APECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 35/156 (22%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAK-------------------HCII 222
KNI+ LLG C ++ Y KG+L ++LR + ++
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 223 ACG--TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+C ARG+ +L + IHRD+ A N+L+ E+ +K++DFGL R I++ + + T
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT- 216
Query: 281 VAGTIGYILLACGG----------DIYSFSVVLLEL 306
G + +A D++SF V++ E+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 27/147 (18%)
Query: 182 KNIVQLLGYCPV--GEKKLIVYEYMVKGSLNDWL---------RNQAKHCIIACGTARGI 230
+NIV+ G C G ++ E++ GSL ++L + Q K+ + C +G+
Sbjct: 71 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC---KGM 127
Query: 231 TFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLI-SDCESHT-STDVAGTIGYI 288
+L R +HRD+ A N+L+ + +VK+ DFGL + I +D E T D + +
Sbjct: 128 DYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY 184
Query: 289 LLAC--------GGDIYSFSVVLLELV 307
C D++SF V L EL+
Sbjct: 185 APECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 183 NIVQLLGYC-PVGEKKL-IVYEYMVKGSLNDWLRNQAK---HCIIACGTARGITFLHHRF 237
NIV+ G C G + L ++ EY+ GSL D+L+ + H + T++ + +
Sbjct: 103 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 162
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGY 287
IHRD+ NIL+ + VK+ DFGL +++ + G ++
Sbjct: 163 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 222
Query: 288 ILLACGGDIYSFSVVLLELV--IRKQPTGP-EF-----KDKNGGNLV 326
+ D++SF VVL EL I K + P EF DK G +V
Sbjct: 223 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 269
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----NQAKHCIIACGTARGITFLHHRFQ 238
N+V + VG++ +V E++ G+L D + N+ + + R +++LH++
Sbjct: 103 NVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQ-- 160
Query: 239 PHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGT--------IGYILL 290
+IHRDI + +ILL D +K+SDFG +S E + GT I +
Sbjct: 161 -GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK-EVPKRKXLVGTPYWMAPEVISRLPY 218
Query: 291 ACGGDIYSFSVVLLELVIRKQP 312
DI+S ++++E++ + P
Sbjct: 219 GTEVDIWSLGIMVIEMIDGEPP 240
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 16/142 (11%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----NQAKHCIIACGTARGITFLHHRFQ 238
NIV L VG++ +V EY+ GSL D + ++ + + + + FLH
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN-- 136
Query: 239 PHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL------LAC 292
+IHR+I + NILL D VK++DFG I+ +S ST V GT ++ A
Sbjct: 137 -QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAY 194
Query: 293 GG--DIYSFSVVLLELVIRKQP 312
G DI+S ++ +E++ + P
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 106/251 (42%), Gaps = 41/251 (16%)
Query: 152 GKLTYDQIVAGTNKFYEKNVIRGDDFG--------IAFKNIVQLLGYC--PVGEKKLIVY 201
G+ + IV K + + + DF + N++ +LG C P ++
Sbjct: 29 GRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88
Query: 202 EYMVKGSL-------NDWLRNQAKHCIIACGTARGITFLHHRFQPHIIHRDINASNILLN 254
+M GSL +++ +Q++ A ARG+ FLH +P I +N+ +++++
Sbjct: 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH-TLEPLIPRHALNSRSVMID 147
Query: 255 EDFEVKVSDFGLVRLISDCE-SHTSTDVAGTIGYILLAC-----------GGDIYSFSVV 302
ED ++S ++D + S S ++ D++SF+V+
Sbjct: 148 EDMTARIS-------MADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVL 200
Query: 303 LLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRP 362
L ELV R+ P + G + L TI S P + K+++I C+ ++P RP
Sbjct: 201 LWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGIS-PHVSKLMKI---CMNEDPAKRP 256
Query: 363 TMLRVQEFLEK 373
+ LEK
Sbjct: 257 KFDMIVPILEK 267
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 19/105 (18%)
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDV 281
IA TA+G+ +LH + +IIHRD+ ++NI L+E VK+ DFGL + S S V
Sbjct: 137 IARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG--SQQV 191
Query: 282 AGTIGYIL--------------LACGGDIYSFSVVLLELVIRKQP 312
G +L + D+YS+ +VL EL+ + P
Sbjct: 192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----NQAKHCIIACGTARGITFLHHRFQ 238
NIV L VG++ +V EY+ GSL D + ++ + + + + FLH
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN-- 135
Query: 239 PHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL------LAC 292
+IHRDI + NILL D VK++DFG I+ +S S V GT ++ A
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAY 193
Query: 293 GG--DIYSFSVVLLELVIRKQP 312
G DI+S ++ +E++ + P
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 183 NIVQLLGYC-PVGEKKL-IVYEYMVKGSLNDWLRNQAK---HCIIACGTARGITFLHHRF 237
NIV+ G C G + L ++ EY+ GSL D+L+ + H + T++ + +
Sbjct: 76 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 135
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGY 287
IHRD+ NIL+ + VK+ DFGL +++ + G ++
Sbjct: 136 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 195
Query: 288 ILLACGGDIYSFSVVLLELV--IRKQPTGP-EF-----KDKNGGNLV 326
+ D++SF VVL EL I K + P EF DK G +V
Sbjct: 196 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 242
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----NQAKHCIIACGTARGITFLHHRFQ 238
NIV L VG++ +V EY+ GSL D + ++ + + + + FLH
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN-- 136
Query: 239 PHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL------LAC 292
+IHRDI + NILL D VK++DFG I+ +S S V GT ++ A
Sbjct: 137 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAY 194
Query: 293 GG--DIYSFSVVLLELVIRKQP 312
G DI+S ++ +E++ + P
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 35/156 (22%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAK-------------------HCII 222
KNI+ LLG C ++ Y KG+L ++LR + ++
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 223 ACG--TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+C ARG+ +L + IHRD+ A N+L+ E+ +K++DFGL R I++ + + T
Sbjct: 161 SCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT- 216
Query: 281 VAGTIGYILLACGG----------DIYSFSVVLLEL 306
G + +A D++SF V++ E+
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 183 NIVQLLGYC-PVGEKKL-IVYEYMVKGSLNDWLRNQAK---HCIIACGTARGITFLHHRF 237
NIV+ G C G + L ++ EY+ GSL D+L+ + H + T++ + +
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGY 287
IHRD+ NIL+ + VK+ DFGL +++ + G ++
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 288 ILLACGGDIYSFSVVLLELV--IRKQPTGP-EF-----KDKNGGNLV 326
+ D++SF VVL EL I K + P EF DK G +V
Sbjct: 192 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 238
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 183 NIVQLLGYC-PVGEKKL-IVYEYMVKGSLNDWLRNQAK---HCIIACGTARGITFLHHRF 237
NIV+ G C G + L ++ EY+ GSL D+L+ + H + T++ + +
Sbjct: 71 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 130
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGY 287
IHRD+ NIL+ + VK+ DFGL +++ + G ++
Sbjct: 131 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 190
Query: 288 ILLACGGDIYSFSVVLLELV--IRKQPTGP-EF-----KDKNGGNLV 326
+ D++SF VVL EL I K + P EF DK G +V
Sbjct: 191 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 237
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 183 NIVQLLGYC-PVGEKKL-IVYEYMVKGSLNDWLRNQAK---HCIIACGTARGITFLHHRF 237
NIV+ G C G + L ++ EY+ GSL D+L+ + H + T++ + +
Sbjct: 78 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 137
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGY 287
IHRD+ NIL+ + VK+ DFGL +++ + G ++
Sbjct: 138 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 197
Query: 288 ILLACGGDIYSFSVVLLELV--IRKQPTGP-EF-----KDKNGGNLV 326
+ D++SF VVL EL I K + P EF DK G +V
Sbjct: 198 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 244
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 88/217 (40%), Gaps = 42/217 (19%)
Query: 199 IVYEYMVKGSLNDWLRNQA--KHCII--ACGTARGITFLH-----HRFQPHIIHRDINAS 249
++ Y GSL D+L+ Q H + A A G+ LH + +P I HRD +
Sbjct: 83 LITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSR 142
Query: 250 NILLNEDFEVKVSDFGLVRLISDCESHT---STDVAGTIGY---------ILLAC----- 292
N+L+ + + ++D GL + S + + GT Y I C
Sbjct: 143 NVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYK 202
Query: 293 GGDIYSFSVVLLELVIRK----------------QPTGPEFKDKNGGNLVDWVLDSTILN 336
DI++F +VL E+ R P P F+D VD +
Sbjct: 203 WTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFEDMKKVVCVDQQTPTIPNR 262
Query: 337 AYSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+ P + + Q++ C + NP+ R T LR+++ L+K
Sbjct: 263 LAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQK 299
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 183 NIVQLLGYC-PVGEKKL-IVYEYMVKGSLNDWLRNQAK---HCIIACGTARGITFLHHRF 237
NIV+ G C G + L ++ EY+ GSL D+L+ + H + T++ + +
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGY 287
IHRD+ NIL+ + VK+ DFGL +++ + G ++
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 288 ILLACGGDIYSFSVVLLELV--IRKQPTGP-EF-----KDKNGGNLV 326
+ D++SF VVL EL I K + P EF DK G +V
Sbjct: 210 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 256
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 183 NIVQLLGYC-PVGEKKL-IVYEYMVKGSLNDWLRNQAK---HCIIACGTARGITFLHHRF 237
NIV+ G C G + L ++ EY+ GSL D+L+ + H + T++ + +
Sbjct: 70 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 129
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGY 287
IHRD+ NIL+ + VK+ DFGL +++ + G ++
Sbjct: 130 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 189
Query: 288 ILLACGGDIYSFSVVLLELV--IRKQPTGP-EF-----KDKNGGNLV 326
+ D++SF VVL EL I K + P EF DK G +V
Sbjct: 190 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 236
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 183 NIVQLLGYC-PVGEKKL-IVYEYMVKGSLNDWLRNQAK---HCIIACGTARGITFLHHRF 237
NIV+ G C G + L ++ EY+ GSL D+L+ + H + T++ + +
Sbjct: 77 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 136
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGY 287
IHRD+ NIL+ + VK+ DFGL +++ + G ++
Sbjct: 137 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 196
Query: 288 ILLACGGDIYSFSVVLLELV--IRKQPTGP-EF-----KDKNGGNLV 326
+ D++SF VVL EL I K + P EF DK G +V
Sbjct: 197 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 243
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 26/207 (12%)
Query: 183 NIVQLLGYC-PVGEKKL-IVYEYMVKGSLNDWLRNQAK---HCIIACGTARGITFLHHRF 237
NIV+ G C G + L ++ EY+ GSL D+L+ + H + T++ + +
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGY 287
IHRD+ NIL+ + VK+ DFGL +++ + G ++
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 288 ILLACGGDIYSFSVVLLELV--IRKQPTGP-EF-----KDKNGGNLVDWVLDSTILNAY- 338
+ D++SF VVL EL I K + P EF DK G +V +++ N
Sbjct: 210 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRL 269
Query: 339 SKPSML--KMLQIVVGCIFDNPTTRPT 363
+P ++ I+ C +N RP+
Sbjct: 270 PRPDGCPDEIYMIMTECWNNNVNQRPS 296
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 183 NIVQLLGYC-PVGEKKL-IVYEYMVKGSLNDWLRNQAK---HCIIACGTARGITFLHHRF 237
NIV+ G C G + L ++ EY+ GSL D+L+ + H + T++ + +
Sbjct: 79 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 138
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGY 287
IHRD+ NIL+ + VK+ DFGL +++ + G ++
Sbjct: 139 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 198
Query: 288 ILLACGGDIYSFSVVLLELV--IRKQPTGP-EF-----KDKNGGNLV 326
+ D++SF VVL EL I K + P EF DK G +V
Sbjct: 199 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 245
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 183 NIVQLLGYC-PVGEKKL-IVYEYMVKGSLNDWLRNQAK---HCIIACGTARGITFLHHRF 237
NIV+ G C G + L ++ EY+ GSL D+L+ + H + T++ + +
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGY 287
IHRD+ NIL+ + VK+ DFGL +++ + G ++
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 288 ILLACGGDIYSFSVVLLELV--IRKQPTGP-EF-----KDKNGGNLV 326
+ D++SF VVL EL I K + P EF DK G +V
Sbjct: 192 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 238
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 20/131 (15%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHCI------IACGTARGITFLHHRFQPHIIHRDINASNIL 252
I E+M GSL+ L+ +AK ++ RG+ +L + Q I+HRD+ SNIL
Sbjct: 91 ICMEHMDGGSLDQVLK-EAKRIPEEILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNIL 147
Query: 253 LNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL--------LACGGDIYSFSVVLL 304
+N E+K+ DFG+ + D +++ GT Y+ + DI+S + L+
Sbjct: 148 VNSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMAPERLQGTHYSVQSDIWSMGLSLV 204
Query: 305 ELVIRKQPTGP 315
EL + + P P
Sbjct: 205 ELAVGRYPIPP 215
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 16/147 (10%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTARGITF-----L 233
++ +NIV ++ + +V EY+ +L++++ + H ++ TA T +
Sbjct: 68 LSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES---HGPLSVDTAINFTNQILDGI 124
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL--LA 291
H I+HRDI NIL++ + +K+ DFG+ + +S+ + V GT+ Y A
Sbjct: 125 KHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQA 184
Query: 292 CG------GDIYSFSVVLLELVIRKQP 312
G DIYS +VL E+++ + P
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 183 NIVQLLGYC-PVGEKKL-IVYEYMVKGSLNDWLRNQAK---HCIIACGTARGITFLHHRF 237
NIV+ G C G + L ++ EY+ GSL D+L+ + H + T++ + +
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGY 287
IHRD+ NIL+ + VK+ DFGL +++ + G ++
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 288 ILLACGGDIYSFSVVLLELV--IRKQPTGP-EF-----KDKNGGNLV 326
+ D++SF VVL EL I K + P EF DK G +V
Sbjct: 195 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 241
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----NQAKHCIIACGTARGITFLHHRFQ 238
N+V++ VGE+ ++ E++ G+L D + N+ + + + + +LH +
Sbjct: 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQ-- 160
Query: 239 PHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGT--------IGYILL 290
+IHRDI + +ILL D VK+SDFG IS + + GT I L
Sbjct: 161 -GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK-DVPKRKXLVGTPYWMAPEVISRSLY 218
Query: 291 ACGGDIYSFSVVLLELVIRKQP 312
A DI+S ++++E+V + P
Sbjct: 219 ATEVDIWSLGIMVIEMVDGEPP 240
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 30/152 (19%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR--------------NQAKHCI------- 221
NI+ LLG C + EY G+L D+LR N +
Sbjct: 87 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDV 281
A ARG+ +L Q IHRD+ A NIL+ E++ K++DFGL R T +
Sbjct: 147 FAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRL 203
Query: 282 A------GTIGYILLACGGDIYSFSVVLLELV 307
++ Y + D++S+ V+L E+V
Sbjct: 204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 235
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 30/152 (19%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR--------------NQAKHCI------- 221
NI+ LLG C + EY G+L D+LR N +
Sbjct: 77 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 136
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDV 281
A ARG+ +L Q IHRD+ A NIL+ E++ K++DFGL R T +
Sbjct: 137 FAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRL 193
Query: 282 A------GTIGYILLACGGDIYSFSVVLLELV 307
++ Y + D++S+ V+L E+V
Sbjct: 194 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 225
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 12/95 (12%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTI 285
T +G+ +LH+ +IHRD+ N+ LN+D +VK+ DFGL I + + D+ GT
Sbjct: 135 TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKDLCGTP 190
Query: 286 GYI---LLACGG-----DIYSFSVVLLELVIRKQP 312
YI +L G DI+S +L L++ K P
Sbjct: 191 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 23/206 (11%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCII------ACGTARGITFLHH 235
+N+++L G K++ E GSL D LR H ++ A A G+ +L
Sbjct: 81 RNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 139
Query: 236 RFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLAC--- 292
+ IHRD+ A N+LL VK+ DFGL+R + + H + + A
Sbjct: 140 K---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 196
Query: 293 -------GGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D + F V L E+ Q + NG ++ + +
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFTYGQEP---WIGLNGSQILHKIDKEGERLPRPEDCPQD 253
Query: 346 MLQIVVGCIFDNPTTRPTMLRVQEFL 371
+ ++V C P RPT + +++FL
Sbjct: 254 IYNVMVQCWAHKPEDRPTFVALRDFL 279
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 183 NIVQLLGYC-PVGEKKL-IVYEYMVKGSLNDWLRNQAK---HCIIACGTARGITFLHHRF 237
NIV+ G C G + L ++ EY+ GSL D+L+ + H + T++ + +
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGY 287
IHRD+ NIL+ + VK+ DFGL +++ + G ++
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTE 191
Query: 288 ILLACGGDIYSFSVVLLELV--IRKQPTGP-EF-----KDKNGGNLV 326
+ D++SF VVL EL I K + P EF DK G +V
Sbjct: 192 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 238
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 12/95 (12%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTI 285
T +G+ +LH+ +IHRD+ N+ LN+D +VK+ DFGL I + + D+ GT
Sbjct: 151 TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKDLCGTP 206
Query: 286 GYI---LLACGG-----DIYSFSVVLLELVIRKQP 312
YI +L G DI+S +L L++ K P
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 85/204 (41%), Gaps = 21/204 (10%)
Query: 191 CPVGEKKLIVYEYMVKGSLNDWLRNQA----KHCIIACGTA-RGITFLHHRFQPHIIHRD 245
P G IV EY+ +L D + + K I A + + F H Q IIHRD
Sbjct: 85 TPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRD 141
Query: 246 INASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA--GTIGYI--------LLACGGD 295
+ +NI+++ VKV DFG+ R I+D + + A GT Y+ + D
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 296 IYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIF 355
+YS VL E++ + P + D V D +A + + +V+ +
Sbjct: 202 VYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVRE--DPIPPSARHEGLSADLDAVVLKALA 259
Query: 356 DNPTTR-PTMLRVQEFLEKYHTGE 378
NP R T ++ L + H GE
Sbjct: 260 KNPENRYQTAAEMRADLVRVHNGE 283
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 23/206 (11%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCII------ACGTARGITFLHH 235
+N+++L G K++ E GSL D LR H ++ A A G+ +L
Sbjct: 71 RNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 236 RFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLAC--- 292
+ IHRD+ A N+LL VK+ DFGL+R + + H + + A
Sbjct: 130 K---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 186
Query: 293 -------GGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D + F V L E+ Q + NG ++ + +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEP---WIGLNGSQILHKIDKEGERLPRPEDCPQD 243
Query: 346 MLQIVVGCIFDNPTTRPTMLRVQEFL 371
+ ++V C P RPT + +++FL
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 198 LIVYEYMVKGSLNDWLR----NQAKHCIIACGTARGITFLH------HRFQPHIIHRDIN 247
L+V EY GSL +L + C +A RG+ +LH ++P I HRD+N
Sbjct: 88 LLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLN 147
Query: 248 ASNILLNEDFEVKVSDFGL-VRLISDC------ESHTSTDVAGTIGYI 288
+ N+L+ D +SDFGL +RL + E + + GTI Y+
Sbjct: 148 SRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYM 195
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 23/167 (13%)
Query: 183 NIVQLLGYC-PVGEKKL-IVYEYMVKGSLNDWLRNQAK---HCIIACGTARGITFLHHRF 237
NIV+ G C G + L ++ EY+ GSL D+L+ + H + T++ + +
Sbjct: 73 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 132
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGY 287
IHR++ NIL+ + VK+ DFGL +++ + + G ++
Sbjct: 133 TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTE 192
Query: 288 ILLACGGDIYSFSVVLLELV--IRKQPTGP-EF-----KDKNGGNLV 326
+ D++SF VVL EL I K + P EF DK G +V
Sbjct: 193 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 239
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 18/137 (13%)
Query: 191 CPVGEKKLIVYEYMVKGSLNDWLRNQA----KHCIIACGTA-RGITFLHHRFQPHIIHRD 245
P G IV EY+ +L D + + K I A + + F H Q IIHRD
Sbjct: 102 TPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRD 158
Query: 246 INASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA--GTIGYI--------LLACGGD 295
+ +NI+++ VKV DFG+ R I+D + + A GT Y+ + D
Sbjct: 159 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 218
Query: 296 IYSFSVVLLELVIRKQP 312
+YS VL E++ + P
Sbjct: 219 VYSLGCVLYEVLTGEPP 235
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 23/206 (11%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCII------ACGTARGITFLHH 235
+N+++L G K++ E GSL D LR H ++ A A G+ +L
Sbjct: 71 RNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 236 RFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLAC--- 292
+ IHRD+ A N+LL VK+ DFGL+R + + H + + A
Sbjct: 130 K---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 293 -------GGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D + F V L E+ Q + NG ++ + +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEP---WIGLNGSQILHKIDKEGERLPRPEDCPQD 243
Query: 346 MLQIVVGCIFDNPTTRPTMLRVQEFL 371
+ ++V C P RPT + +++FL
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 36/218 (16%)
Query: 183 NIVQLLGYCPVGE-----KKLIVYEYMVKGSLNDWL-----RNQAKHCIIAC------GT 226
N+++LLG C K +++ +M G L+ +L KH +
Sbjct: 97 NVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDI 156
Query: 227 ARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG--- 283
A G+ +L +R + +HRD+ A N +L +D V V+DFGL + I + + +A
Sbjct: 157 ALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPV 213
Query: 284 ------TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNA 337
++ + D+++F V + E+ R P ++ + D++L L
Sbjct: 214 KWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH---EMYDYLLHGHRLKQ 270
Query: 338 YSKPSMLKMLQIVVGCIFDNPTTRPT--MLRVQEFLEK 373
+ + ++ +I+ C +P RPT +LR+Q LEK
Sbjct: 271 -PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ--LEK 305
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 23/206 (11%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCII------ACGTARGITFLHH 235
+N+++L G K++ E GSL D LR H ++ A A G+ +L
Sbjct: 71 RNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 236 RFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLAC--- 292
+ IHRD+ A N+LL VK+ DFGL+R + + H + + A
Sbjct: 130 K---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 293 -------GGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D + F V L E+ Q + NG ++ + +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEP---WIGLNGSQILHKIDKEGERLPRPEDCPQD 243
Query: 346 MLQIVVGCIFDNPTTRPTMLRVQEFL 371
+ ++V C P RPT + +++FL
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVALRDFL 269
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 18/137 (13%)
Query: 191 CPVGEKKLIVYEYMVKGSLNDWLRNQA----KHCIIACGTA-RGITFLHHRFQPHIIHRD 245
P G IV EY+ +L D + + K I A + + F H Q IIHRD
Sbjct: 85 TPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRD 141
Query: 246 INASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA--GTIGYI--------LLACGGD 295
+ +NI+++ VKV DFG+ R I+D + + A GT Y+ + D
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 296 IYSFSVVLLELVIRKQP 312
+YS VL E++ + P
Sbjct: 202 VYSLGCVLYEVLTGEPP 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 18/137 (13%)
Query: 191 CPVGEKKLIVYEYMVKGSLNDWLRNQA----KHCIIACGTA-RGITFLHHRFQPHIIHRD 245
P G IV EY+ +L D + + K I A + + F H Q IIHRD
Sbjct: 85 TPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRD 141
Query: 246 INASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA--GTIGYI--------LLACGGD 295
+ +NI+++ VKV DFG+ R I+D + + A GT Y+ + D
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 296 IYSFSVVLLELVIRKQP 312
+YS VL E++ + P
Sbjct: 202 VYSLGCVLYEVLTGEPP 218
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 23/206 (11%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCII------ACGTARGITFLHH 235
+N+++L G K++ E GSL D LR H ++ A A G+ +L
Sbjct: 81 RNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 139
Query: 236 RFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLAC--- 292
+ IHRD+ A N+LL VK+ DFGL+R + + H + + A
Sbjct: 140 K---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 196
Query: 293 -------GGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D + F V L E+ Q + NG ++ + +
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFTYGQEP---WIGLNGSQILHKIDKEGERLPRPEDCPQD 253
Query: 346 MLQIVVGCIFDNPTTRPTMLRVQEFL 371
+ ++V C P RPT + +++FL
Sbjct: 254 IYNVMVQCWAHKPEDRPTFVALRDFL 279
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 18/137 (13%)
Query: 191 CPVGEKKLIVYEYMVKGSLNDWLRNQA----KHCIIACGTA-RGITFLHHRFQPHIIHRD 245
P G IV EY+ +L D + + K I A + + F H Q IIHRD
Sbjct: 85 TPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRD 141
Query: 246 INASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA--GTIGYI--------LLACGGD 295
+ +NI+++ VKV DFG+ R I+D + + A GT Y+ + D
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 296 IYSFSVVLLELVIRKQP 312
+YS VL E++ + P
Sbjct: 202 VYSLGCVLYEVLTGEPP 218
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 16/143 (11%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----NQAKHCIIACGTARGITFLHHRF 237
+N+V++ VG++ +V E++ G+L D + N+ + + + ++ LH +
Sbjct: 131 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ- 189
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGT--------IGYIL 289
+IHRDI + +ILL D VK+SDFG +S E + GT I +
Sbjct: 190 --GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLP 246
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
DI+S ++++E+V + P
Sbjct: 247 YGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 23/147 (15%)
Query: 176 DFGIAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR------NQAKHCIIACGTARG 229
DF + ++ + Y P + +V EY+ G L D+L+ + ++ + + +G
Sbjct: 71 DFIVKYRGV----SYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 126
Query: 230 ITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG------ 283
+ +L R +HRD+ A NIL+ + VK++DFGL +L+ + + G
Sbjct: 127 MEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 183
Query: 284 ----TIGYILLACGGDIYSFSVVLLEL 306
++ + + D++SF VVL EL
Sbjct: 184 YAPESLSDNIFSRQSDVWSFGVVLYEL 210
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 16/143 (11%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----NQAKHCIIACGTARGITFLHHRF 237
+N+V++ VG++ +V E++ G+L D + N+ + + + ++ LH +
Sbjct: 81 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ- 139
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGT--------IGYIL 289
+IHRDI + +ILL D VK+SDFG +S E + GT I +
Sbjct: 140 --GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLP 196
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
DI+S ++++E+V + P
Sbjct: 197 YGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 16/143 (11%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----NQAKHCIIACGTARGITFLHHRF 237
+N+V++ VG++ +V E++ G+L D + N+ + + + ++ LH +
Sbjct: 88 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ- 146
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGT--------IGYIL 289
+IHRDI + +ILL D VK+SDFG +S E + GT I +
Sbjct: 147 --GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLP 203
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
DI+S ++++E+V + P
Sbjct: 204 YGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 16/143 (11%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----NQAKHCIIACGTARGITFLHHRF 237
+N+V++ VG++ +V E++ G+L D + N+ + + + ++ LH +
Sbjct: 86 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ- 144
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGT--------IGYIL 289
+IHRDI + +ILL D VK+SDFG +S E + GT I +
Sbjct: 145 --GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLP 201
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
DI+S ++++E+V + P
Sbjct: 202 YGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 16/143 (11%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----NQAKHCIIACGTARGITFLHHRF 237
+N+V++ VG++ +V E++ G+L D + N+ + + + ++ LH +
Sbjct: 77 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ- 135
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGT--------IGYIL 289
+IHRDI + +ILL D VK+SDFG +S E + GT I +
Sbjct: 136 --GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLP 192
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
DI+S ++++E+V + P
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 61/137 (44%), Gaps = 18/137 (13%)
Query: 191 CPVGEKKLIVYEYMVKGSLNDWLRNQA----KHCIIACGTA-RGITFLHHRFQPHIIHRD 245
P G IV EY+ +L D + + K I A + + F H Q IIHRD
Sbjct: 85 TPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRD 141
Query: 246 INASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA--GTIGYI--------LLACGGD 295
+ +NIL++ VKV DFG+ R I+D + A GT Y+ + D
Sbjct: 142 VKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 296 IYSFSVVLLELVIRKQP 312
+YS VL E++ + P
Sbjct: 202 VYSLGCVLYEVLTGEPP 218
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 23/147 (15%)
Query: 176 DFGIAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR------NQAKHCIIACGTARG 229
DF + ++ + Y P + +V EY+ G L D+L+ + ++ + + +G
Sbjct: 72 DFIVKYRGV----SYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 127
Query: 230 ITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG------ 283
+ +L R +HRD+ A NIL+ + VK++DFGL +L+ + + G
Sbjct: 128 MEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 184
Query: 284 ----TIGYILLACGGDIYSFSVVLLEL 306
++ + + D++SF VVL EL
Sbjct: 185 YAPESLSDNIFSRQSDVWSFGVVLYEL 211
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 23/147 (15%)
Query: 176 DFGIAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR------NQAKHCIIACGTARG 229
DF + ++ + Y P + +V EY+ G L D+L+ + ++ + + +G
Sbjct: 84 DFIVKYRGV----SYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 139
Query: 230 ITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG------ 283
+ +L R +HRD+ A NIL+ + VK++DFGL +L+ + + G
Sbjct: 140 MEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 196
Query: 284 ----TIGYILLACGGDIYSFSVVLLEL 306
++ + + D++SF VVL EL
Sbjct: 197 YAPESLSDNIFSRQSDVWSFGVVLYEL 223
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 23/206 (11%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCII------ACGTARGITFLHH 235
+N+++L G K++ E GSL D LR H ++ A A G+ +L
Sbjct: 75 RNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 133
Query: 236 RFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLAC--- 292
+ IHRD+ A N+LL VK+ DFGL+R + + H + + A
Sbjct: 134 K---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 293 -------GGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D + F V L E+ Q + NG ++ + +
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFTYGQEP---WIGLNGSQILHKIDKEGERLPRPEDCPQD 247
Query: 346 MLQIVVGCIFDNPTTRPTMLRVQEFL 371
+ ++V C P RPT + +++FL
Sbjct: 248 IYNVMVQCWAHKPEDRPTFVALRDFL 273
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 16/143 (11%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----NQAKHCIIACGTARGITFLHHRF 237
+N+V++ VG++ +V E++ G+L D + N+ + + + ++ LH +
Sbjct: 208 ENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ- 266
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGT--------IGYIL 289
+IHRDI + +ILL D VK+SDFG +S E + GT I +
Sbjct: 267 --GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK-EVPRRKXLVGTPYWMAPELISRLP 323
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
DI+S ++++E+V + P
Sbjct: 324 YGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 17/124 (13%)
Query: 178 GIAFKNIVQLLGYCPVGEKK----LIVYEYMVKGSLNDWLRNQA----KHCIIACGTARG 229
G+ +NI+Q +G G ++ + KGSL+D+L+ + C IA ARG
Sbjct: 74 GMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARG 133
Query: 230 ITFLHHRF-------QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA 282
+ +LH +P I HRDI + N+LL + ++DFGL +S + D
Sbjct: 134 LAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS--AGDTH 191
Query: 283 GTIG 286
G +G
Sbjct: 192 GQVG 195
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 25/143 (17%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKH---------CIIACGTARGITFL 233
++V+LLG C + +V + M G L +++ + C+ A+G+ +L
Sbjct: 101 HLVRLLGVC-LSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCV---QIAKGMMYL 156
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG-TIGYILLAC 292
R ++HRD+ A N+L+ VK++DFGL RL+ E + D I ++ L C
Sbjct: 157 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 293 --------GGDIYSFSVVLLELV 307
D++S+ V + EL+
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELM 236
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 23/206 (11%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCII------ACGTARGITFLHH 235
+N+++L G K++ E GSL D LR H ++ A A G+ +L
Sbjct: 75 RNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 133
Query: 236 RFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLAC--- 292
+ IHRD+ A N+LL VK+ DFGL+R + + H + + A
Sbjct: 134 K---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 293 -------GGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLK 345
D + F V L E+ Q + NG ++ + +
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFTYGQEP---WIGLNGSQILHKIDKEGERLPRPEDCPQD 247
Query: 346 MLQIVVGCIFDNPTTRPTMLRVQEFL 371
+ ++V C P RPT + +++FL
Sbjct: 248 IYNVMVQCWAHKPEDRPTFVALRDFL 273
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 25/143 (17%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKH---------CIIACGTARGITFL 233
++V+LLG C + +V + M G L +++ + C+ A+G+ +L
Sbjct: 78 HLVRLLGVC-LSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCV---QIAKGMMYL 133
Query: 234 HHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG-TIGYILLAC 292
R ++HRD+ A N+L+ VK++DFGL RL+ E + D I ++ L C
Sbjct: 134 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 293 --------GGDIYSFSVVLLELV 307
D++S+ V + EL+
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELM 213
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 67/156 (42%), Gaps = 19/156 (12%)
Query: 227 ARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA---- 282
A+G+ FL R IHRD+ A NILL+E VK+ DFGL R I + A
Sbjct: 203 AKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259
Query: 283 -----GTIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNA 337
TI + D++SF V+L E+ P K + + T + A
Sbjct: 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKEGTRMRA 317
Query: 338 --YSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFL 371
Y+ P +M Q ++ C P+ RPT + E L
Sbjct: 318 PDYTTP---EMYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 67/156 (42%), Gaps = 19/156 (12%)
Query: 227 ARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA---- 282
A+G+ FL R IHRD+ A NILL+E VK+ DFGL R I + A
Sbjct: 208 AKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 264
Query: 283 -----GTIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNA 337
TI + D++SF V+L E+ P K + + T + A
Sbjct: 265 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKEGTRMRA 322
Query: 338 --YSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFL 371
Y+ P +M Q ++ C P+ RPT + E L
Sbjct: 323 PDYTTP---EMYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 67/156 (42%), Gaps = 19/156 (12%)
Query: 227 ARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA---- 282
A+G+ FL R IHRD+ A NILL+E VK+ DFGL R I + A
Sbjct: 201 AKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 257
Query: 283 -----GTIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNA 337
TI + D++SF V+L E+ P K + + T + A
Sbjct: 258 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKEGTRMRA 315
Query: 338 --YSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFL 371
Y+ P +M Q ++ C P+ RPT + E L
Sbjct: 316 PDYTTP---EMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 67/156 (42%), Gaps = 19/156 (12%)
Query: 227 ARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA---- 282
A+G+ FL R IHRD+ A NILL+E VK+ DFGL R I + A
Sbjct: 210 AKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 266
Query: 283 -----GTIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNA 337
TI + D++SF V+L E+ P K + + T + A
Sbjct: 267 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKEGTRMRA 324
Query: 338 --YSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFL 371
Y+ P +M Q ++ C P+ RPT + E L
Sbjct: 325 PDYTTP---EMYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 18/130 (13%)
Query: 199 IVYEYMVKGSLNDWLRNQAK-----HCIIACGTARGITFLHHRFQPHIIHRDINASNILL 253
I E+M GSL+ L+ + ++ +G+T+L + + I+HRD+ SNIL+
Sbjct: 143 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILV 200
Query: 254 NEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL--------LACGGDIYSFSVVLLE 305
N E+K+ DFG+ + D +++ GT Y+ + DI+S + L+E
Sbjct: 201 NSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 257
Query: 306 LVIRKQPTGP 315
+ + + P P
Sbjct: 258 MAVGRYPIPP 267
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 23/147 (15%)
Query: 176 DFGIAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR------NQAKHCIIACGTARG 229
DF + ++ + Y P + +V EY+ G L D+L+ + ++ + + +G
Sbjct: 68 DFIVKYRGV----SYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 123
Query: 230 ITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG------ 283
+ +L R +HRD+ A NIL+ + VK++DFGL +L+ + G
Sbjct: 124 MEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFW 180
Query: 284 ----TIGYILLACGGDIYSFSVVLLEL 306
++ + + D++SF VVL EL
Sbjct: 181 YAPESLSDNIFSRQSDVWSFGVVLYEL 207
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 30/152 (19%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR--------------NQAKHCI------- 221
NI+ LLG C + EY G+L D+LR N +
Sbjct: 84 NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 143
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDV 281
A ARG+ +L Q IHR++ A NIL+ E++ K++DFGL R T +
Sbjct: 144 FAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRL 200
Query: 282 A------GTIGYILLACGGDIYSFSVVLLELV 307
++ Y + D++S+ V+L E+V
Sbjct: 201 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 232
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 18/130 (13%)
Query: 199 IVYEYMVKGSLNDWLRNQAK-----HCIIACGTARGITFLHHRFQPHIIHRDINASNILL 253
I E+M GSL+ L+ + ++ +G+T+L + + I+HRD+ SNIL+
Sbjct: 108 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILV 165
Query: 254 NEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL--------LACGGDIYSFSVVLLE 305
N E+K+ DFG+ + D +++ GT Y+ + DI+S + L+E
Sbjct: 166 NSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 222
Query: 306 LVIRKQPTGP 315
+ + + P P
Sbjct: 223 MAVGRYPIPP 232
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 21/138 (15%)
Query: 184 IVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI------IACGTARGITFLHHRF 237
IV+++G C E ++V E G LN +L+ Q +H + + G+ +L
Sbjct: 90 IVRMIGICE-AESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLE--- 144
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGT----------IGY 287
+ + +HRD+ A N+LL K+SDFGL + + E++ G I Y
Sbjct: 145 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 204
Query: 288 ILLACGGDIYSFSVVLLE 305
+ D++SF V++ E
Sbjct: 205 YKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 21/138 (15%)
Query: 184 IVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI------IACGTARGITFLHHRF 237
IV+++G C E ++V E G LN +L+ Q +H + + G+ +L
Sbjct: 90 IVRMIGICE-AESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLE--- 144
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGT----------IGY 287
+ + +HRD+ A N+LL K+SDFGL + + E++ G I Y
Sbjct: 145 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 204
Query: 288 ILLACGGDIYSFSVVLLE 305
+ D++SF V++ E
Sbjct: 205 YKFSSKSDVWSFGVLMWE 222
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 21/138 (15%)
Query: 184 IVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI------IACGTARGITFLHHRF 237
IV+++G C E ++V E G LN +L+ Q +H + + G+ +L
Sbjct: 70 IVRMIGICE-AESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLE--- 124
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGT----------IGY 287
+ + +HRD+ A N+LL K+SDFGL + + E++ G I Y
Sbjct: 125 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 184
Query: 288 ILLACGGDIYSFSVVLLE 305
+ D++SF V++ E
Sbjct: 185 YKFSSKSDVWSFGVLMWE 202
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 21/138 (15%)
Query: 184 IVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI------IACGTARGITFLHHRF 237
IV+++G C E ++V E G LN +L+ Q +H + + G+ +L
Sbjct: 74 IVRMIGICE-AESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLE--- 128
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGT----------IGY 287
+ + +HRD+ A N+LL K+SDFGL + + E++ G I Y
Sbjct: 129 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 188
Query: 288 ILLACGGDIYSFSVVLLE 305
+ D++SF V++ E
Sbjct: 189 YKFSSKSDVWSFGVLMWE 206
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 21/138 (15%)
Query: 184 IVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI------IACGTARGITFLHHRF 237
IV+++G C E ++V E G LN +L+ Q +H + + G+ +L
Sbjct: 88 IVRMIGICE-AESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLE--- 142
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGT----------IGY 287
+ + +HRD+ A N+LL K+SDFGL + + E++ G I Y
Sbjct: 143 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 202
Query: 288 ILLACGGDIYSFSVVLLE 305
+ D++SF V++ E
Sbjct: 203 YKFSSKSDVWSFGVLMWE 220
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 21/138 (15%)
Query: 184 IVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI------IACGTARGITFLHHRF 237
IV+++G C E ++V E G LN +L+ Q +H + + G+ +L
Sbjct: 80 IVRMIGICE-AESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLE--- 134
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGT----------IGY 287
+ + +HRD+ A N+LL K+SDFGL + + E++ G I Y
Sbjct: 135 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 194
Query: 288 ILLACGGDIYSFSVVLLE 305
+ D++SF V++ E
Sbjct: 195 YKFSSKSDVWSFGVLMWE 212
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 18/130 (13%)
Query: 199 IVYEYMVKGSLNDWLRNQAK-----HCIIACGTARGITFLHHRFQPHIIHRDINASNILL 253
I E+M GSL+ L+ + ++ +G+T+L + + I+HRD+ SNIL+
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILV 138
Query: 254 NEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL--------LACGGDIYSFSVVLLE 305
N E+K+ DFG+ + D +++ GT Y+ + DI+S + L+E
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
Query: 306 LVIRKQPTGP 315
+ + + P P
Sbjct: 196 MAVGRYPIPP 205
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 18/130 (13%)
Query: 199 IVYEYMVKGSLNDWLRNQAK-----HCIIACGTARGITFLHHRFQPHIIHRDINASNILL 253
I E+M GSL+ L+ + ++ +G+T+L + + I+HRD+ SNIL+
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILV 138
Query: 254 NEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL--------LACGGDIYSFSVVLLE 305
N E+K+ DFG+ + D +++ GT Y+ + DI+S + L+E
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
Query: 306 LVIRKQPTGP 315
+ + + P P
Sbjct: 196 MAVGRYPIPP 205
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 18/130 (13%)
Query: 199 IVYEYMVKGSLNDWLRNQAK-----HCIIACGTARGITFLHHRFQPHIIHRDINASNILL 253
I E+M GSL+ L+ + ++ +G+T+L + + I+HRD+ SNIL+
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILV 138
Query: 254 NEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL--------LACGGDIYSFSVVLLE 305
N E+K+ DFG+ + D +++ GT Y+ + DI+S + L+E
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
Query: 306 LVIRKQPTGP 315
+ + + P P
Sbjct: 196 MAVGRYPIPP 205
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 18/130 (13%)
Query: 199 IVYEYMVKGSLNDWLRNQAK-----HCIIACGTARGITFLHHRFQPHIIHRDINASNILL 253
I E+M GSL+ L+ + ++ +G+T+L + + I+HRD+ SNIL+
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILV 138
Query: 254 NEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL--------LACGGDIYSFSVVLLE 305
N E+K+ DFG+ + D +++ GT Y+ + DI+S + L+E
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMANS---FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 195
Query: 306 LVIRKQPTGP 315
+ + + P P
Sbjct: 196 MAVGRYPIPP 205
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 21/138 (15%)
Query: 184 IVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI------IACGTARGITFLHHRF 237
IV+++G C E ++V E G LN +L+ Q +H + + G+ +L
Sbjct: 68 IVRMIGICE-AESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLE--- 122
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGT----------IGY 287
+ + +HRD+ A N+LL K+SDFGL + + E++ G I Y
Sbjct: 123 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 182
Query: 288 ILLACGGDIYSFSVVLLE 305
+ D++SF V++ E
Sbjct: 183 YKFSSKSDVWSFGVLMWE 200
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 21/138 (15%)
Query: 184 IVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI------IACGTARGITFLHHRF 237
IV+++G C E ++V E G LN +L+ Q +H + + G+ +L
Sbjct: 433 IVRMIGICEA-ESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLE--- 487
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGT----------IGY 287
+ + +HRD+ A N+LL K+SDFGL + + E++ G I Y
Sbjct: 488 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 547
Query: 288 ILLACGGDIYSFSVVLLE 305
+ D++SF V++ E
Sbjct: 548 YKFSSKSDVWSFGVLMWE 565
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 21/138 (15%)
Query: 184 IVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI------IACGTARGITFLHHRF 237
IV+++G C E ++V E G LN +L+ Q +H + + G+ +L
Sbjct: 432 IVRMIGICEA-ESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLE--- 486
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGT----------IGY 287
+ + +HRD+ A N+LL K+SDFGL + + E++ G I Y
Sbjct: 487 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 546
Query: 288 ILLACGGDIYSFSVVLLE 305
+ D++SF V++ E
Sbjct: 547 YKFSSKSDVWSFGVLMWE 564
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ----AKHCIIACGT--ARGITFLHHR 236
+IV+LLG CP G +V +Y+ GSL D +R ++ G A+G+ +L
Sbjct: 94 HIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH 152
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLI-SDCESHTSTDVAGTIGYILLAC--- 292
++HR++ A N+LL +V+V+DFG+ L+ D + ++ I ++ L
Sbjct: 153 ---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF 209
Query: 293 -----GGDIYSFSVVLLELV 307
D++S+ V + EL+
Sbjct: 210 GKYTHQSDVWSYGVTVWELM 229
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ----AKHCIIACGT--ARGITFLHHR 236
+IV+LLG CP G +V +Y+ GSL D +R ++ G A+G+ +L
Sbjct: 76 HIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH 134
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLI-SDCESHTSTDVAGTIGYILLAC--- 292
++HR++ A N+LL +V+V+DFG+ L+ D + ++ I ++ L
Sbjct: 135 ---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF 191
Query: 293 -----GGDIYSFSVVLLELV 307
D++S+ V + EL+
Sbjct: 192 GKYTHQSDVWSYGVTVWELM 211
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 183 NIVQLLGYC-PVGEKKL-IVYEYMVKGSLNDWLRNQAK---HCIIACGTARGITFLHHRF 237
NIV+ G C G + L ++ E++ GSL ++L+ + H + T++ + +
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG----------TIGY 287
IHRD+ NIL+ + VK+ DFGL +++ + G ++
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 288 ILLACGGDIYSFSVVLLELV--IRKQPTGP-EF-----KDKNGGNLV 326
+ D++SF VVL EL I K + P EF DK G +V
Sbjct: 195 SKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 241
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 30/150 (20%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI 288
G +LH +IHRD+ N+ LNED EVK+ DFGL + + + + GT YI
Sbjct: 129 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTPNYI 184
Query: 289 ---LLACGG-----DIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTIL----N 336
+L+ G D++S ++ L++ K P L T L N
Sbjct: 185 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP------------FETSCLKETYLRIKKN 232
Query: 337 AYSKPSMLKML--QIVVGCIFDNPTTRPTM 364
YS P + + ++ + +PT RPT+
Sbjct: 233 EYSIPKHINPVAASLIQKMLQTDPTARPTI 262
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 30/150 (20%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI 288
G +LH +IHRD+ N+ LNED EVK+ DFGL + + + + GT YI
Sbjct: 129 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTPNYI 184
Query: 289 ---LLACGG-----DIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTIL----N 336
+L+ G D++S ++ L++ K P L T L N
Sbjct: 185 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP------------FETSCLKETYLRIKKN 232
Query: 337 AYSKPSMLKML--QIVVGCIFDNPTTRPTM 364
YS P + + ++ + +PT RPT+
Sbjct: 233 EYSIPKHINPVAASLIQKMLQTDPTARPTI 262
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 30/150 (20%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI 288
G +LH +IHRD+ N+ LNED EVK+ DFGL + + + + GT YI
Sbjct: 133 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTPNYI 188
Query: 289 ---LLACGG-----DIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTIL----N 336
+L+ G D++S ++ L++ K P L T L N
Sbjct: 189 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP------------FETSCLKETYLRIKKN 236
Query: 337 AYSKPSMLKML--QIVVGCIFDNPTTRPTM 364
YS P + + ++ + +PT RPT+
Sbjct: 237 EYSIPKHINPVAASLIQKMLQTDPTARPTI 266
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 16/142 (11%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKH------CIIACGTARGITFLHHR 236
N +Q G +V EY + GS +D L K + G +G+ +LH
Sbjct: 115 NTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 173
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLACGG-- 294
++IHRD+ A NILL+E VK+ DFG +++ T IL G
Sbjct: 174 ---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQY 230
Query: 295 ----DIYSFSVVLLELVIRKQP 312
D++S + +EL RK P
Sbjct: 231 DGKVDVWSLGITCIELAERKPP 252
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 93/238 (39%), Gaps = 63/238 (26%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAK------------------H----- 219
++++L G C L++ EY GSL +LR K H
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 220 ------CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDC 273
A ++G+ +L + ++HRD+ A NIL+ E ++K+SDFGL R + +
Sbjct: 147 LTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 274 ESHTSTDVAGTIGYILLA----------CGGDIYSFSVVLLELVIRKQPTGPEFKDKNGG 323
+S+ G I +A D++SF V+L E+V GG
Sbjct: 204 DSYVKRS-QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL------------GG 250
Query: 324 NLVDWVLDSTILN------AYSKPS--MLKMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
N + + N +P +M ++++ C P RP + + LEK
Sbjct: 251 NPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 31/169 (18%)
Query: 178 GIAFKNIVQLLGYCPVGE----KKLIVYEYMVKGSLNDWLRNQ----AKHCIIACGTARG 229
G+ +N++Q + G + ++ + KGSL D+L+ + C +A +RG
Sbjct: 65 GMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRG 124
Query: 230 ITFLHHRF--------QPHIIHRDINASNILLNEDFEVKVSDFGL-VRLISDCESHTSTD 280
+++LH +P I HRD + N+LL D ++DFGL VR +
Sbjct: 125 LSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHG 184
Query: 281 VAGTIGYILLAC--GG-----------DIYSFSVVLLELVIR-KQPTGP 315
GT Y+ G D+Y+ +VL ELV R K GP
Sbjct: 185 QVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGP 233
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 96/227 (42%), Gaps = 50/227 (22%)
Query: 199 IVYEYMVKGSLNDWLRN---QAKHCI-IACGTARGITFLHHRF-----QPHIIHRDINAS 249
++ +Y GSL D+L++ AK + +A + G+ LH +P I HRD+ +
Sbjct: 112 LITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSK 171
Query: 250 NILLNEDFEVKVSDFGL-VRLISDCESHTSTDV-----AGTIGYILLAC----------- 292
NIL+ ++ ++D GL V+ ISD D+ GT Y+
Sbjct: 172 NILVKKNGTCCIADLGLAVKFISDT---NEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQ 228
Query: 293 ---GGDIYSFSVVLLELVIR----------------KQPTGPEFKDKNGGNLVDWVLDST 333
D+YSF ++L E+ R P+ P ++D + L +
Sbjct: 229 SYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIK-KLRPS 287
Query: 334 ILNAYSKPSMLKML-QIVVGCIFDNPTTRPTMLRVQEFLEKYHTGEN 379
N +S L+ + +++ C NP +R T LRV++ L K ++
Sbjct: 288 FPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 12/95 (12%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTI 285
T +G+ +LH+ +IHRD+ N+ LN+D +VK+ DFGL I + + + GT
Sbjct: 151 TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKTLCGTP 206
Query: 286 GYI---LLACGG-----DIYSFSVVLLELVIRKQP 312
YI +L G DI+S +L L++ K P
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 21/138 (15%)
Query: 184 IVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI------IACGTARGITFLHHRF 237
IV+++G C E ++V E G LN +L+ Q +H + + G+ +L
Sbjct: 74 IVRMIGICE-AESWMLVMEMAELGPLNKYLQ-QNRHVKDKNIIELVHQVSMGMKYLE--- 128
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGT----------IGY 287
+ + +HRD+ A N+LL K+SDFGL + + E+ G I Y
Sbjct: 129 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINY 188
Query: 288 ILLACGGDIYSFSVVLLE 305
+ D++SF V++ E
Sbjct: 189 YKFSSKSDVWSFGVLMWE 206
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 12/95 (12%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTI 285
T +G+ +LH+ +IHRD+ N+ LN+D +VK+ DFGL I + + + GT
Sbjct: 151 TIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKXLCGTP 206
Query: 286 GYI---LLACGG-----DIYSFSVVLLELVIRKQP 312
YI +L G DI+S +L L++ K P
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 22/158 (13%)
Query: 227 ARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLI---------SDCESHT 277
ARG+ FL R IHRD+ A NILL+E+ VK+ DFGL R I D
Sbjct: 209 ARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPL 265
Query: 278 STDVAGTIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNA 337
+I + + D++S+ V+L E+ P + + + + + A
Sbjct: 266 KWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDE--DFCSRLREGMRMRA 323
Query: 338 --YSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
YS P ++ QI++ C +P RP R E +EK
Sbjct: 324 PEYSTP---EIYQIMLDCWHRDPKERP---RFAELVEK 355
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 220 CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS- 278
C RG+ ++H +++HRD+ SN+LLN ++K+ DFGL R+ HT
Sbjct: 127 CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGF 183
Query: 279 -TDVAGTIGY----ILLACGG-----DIYSFSVVLLELV 307
T+ T Y I+L G DI+S +L E++
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 30/150 (20%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI 288
G +LH +IHRD+ N+ LNED EVK+ DFGL + + + + GT YI
Sbjct: 153 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYI 208
Query: 289 ---LLACGG-----DIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTIL----N 336
+L+ G D++S ++ L++ K P L T L N
Sbjct: 209 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP------------FETSCLKETYLRIKKN 256
Query: 337 AYSKPSMLKML--QIVVGCIFDNPTTRPTM 364
YS P + + ++ + +PT RPT+
Sbjct: 257 EYSIPKHINPVAASLIQKMLQTDPTARPTI 286
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 16/142 (11%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKH------CIIACGTARGITFLHHR 236
N +Q G +V EY + GS +D L K + G +G+ +LH
Sbjct: 76 NTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 134
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLACGG-- 294
++IHRD+ A NILL+E VK+ DFG +++ T IL G
Sbjct: 135 ---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQY 191
Query: 295 ----DIYSFSVVLLELVIRKQP 312
D++S + +EL RK P
Sbjct: 192 DGKVDVWSLGITCIELAERKPP 213
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 30/150 (20%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI 288
G +LH +IHRD+ N+ LNED EVK+ DFGL + + + + GT YI
Sbjct: 151 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYI 206
Query: 289 ---LLACGG-----DIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTIL----N 336
+L+ G D++S ++ L++ K P L T L N
Sbjct: 207 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP------------FETSCLKETYLRIKKN 254
Query: 337 AYSKPSMLKML--QIVVGCIFDNPTTRPTM 364
YS P + + ++ + +PT RPT+
Sbjct: 255 EYSIPKHINPVAASLIQKMLQTDPTARPTI 284
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 90/235 (38%), Gaps = 57/235 (24%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAK-------------HCIIACGTARG 229
++++L G C L++ EY GSL +LR K + R
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 230 ITF-------------LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESH 276
+T + + + ++HRD+ A NIL+ E ++K+SDFGL R + + +S
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 277 TSTDVAGTIGYILLA----------CGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLV 326
G I +A D++SF V+L E+V GGN
Sbjct: 207 VKRS-QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL------------GGNPY 253
Query: 327 DWVLDSTILN------AYSKPS--MLKMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+ + N +P +M ++++ C P RP + + LEK
Sbjct: 254 PGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 220 CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS- 278
C RG+ ++H +++HRD+ SN+LLN ++K+ DFGL R+ HT
Sbjct: 127 CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 183
Query: 279 -TDVAGTIGY----ILLACGG-----DIYSFSVVLLELV 307
T+ T Y I+L G DI+S +L E++
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 30/150 (20%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI 288
G +LH +IHRD+ N+ LNED EVK+ DFGL + + + + GT YI
Sbjct: 127 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYI 182
Query: 289 ---LLACGG-----DIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTIL----N 336
+L+ G D++S ++ L++ K P L T L N
Sbjct: 183 APEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP------------FETSCLKETYLRIKKN 230
Query: 337 AYSKPSMLKML--QIVVGCIFDNPTTRPTM 364
YS P + + ++ + +PT RPT+
Sbjct: 231 EYSIPKHINPVAASLIQKMLQTDPTARPTI 260
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI+ + M G L D++R +++ + C A+G+ +L R
Sbjct: 79 HVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 137
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFGL +L+ E + +I +
Sbjct: 138 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 194
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 195 RIYTHQSDVWSYGVTVWELM 214
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 220 CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS- 278
C RG+ ++H +++HRD+ SN+LLN ++K+ DFGL R+ HT
Sbjct: 131 CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 187
Query: 279 -TDVAGTIGY----ILLACGG-----DIYSFSVVLLELV 307
T+ T Y I+L G DI+S +L E++
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 90/235 (38%), Gaps = 57/235 (24%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAK-------------HCIIACGTARG 229
++++L G C L++ EY GSL +LR K + R
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 230 ITF-------------LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESH 276
+T + + + ++HRD+ A NIL+ E ++K+SDFGL R + + +S
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 277 TSTDVAGTIGYILLA----------CGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLV 326
G I +A D++SF V+L E+V GGN
Sbjct: 207 VKRS-QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL------------GGNPY 253
Query: 327 DWVLDSTILN------AYSKPS--MLKMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+ + N +P +M ++++ C P RP + + LEK
Sbjct: 254 PGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI + M G L D++R +++ + C A+G+ +L R
Sbjct: 112 HVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 170
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFGL +L+ E + +I +
Sbjct: 171 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 227
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 228 RIYTHQSDVWSYGVTVWELM 247
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 18/138 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIAC------GTARGITFLHHR 236
NIV+L+G C + IV E + G +LR + + A G+ +L +
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK 232
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTST---------DVAGTIGY 287
IHRD+ A N L+ E +K+SDFG+ R +D S + Y
Sbjct: 233 C---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNY 289
Query: 288 ILLACGGDIYSFSVVLLE 305
+ D++SF ++L E
Sbjct: 290 GRYSSESDVWSFGILLWE 307
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 220 CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS- 278
C RG+ ++H +++HRD+ SN+LLN ++K+ DFGL R+ HT
Sbjct: 147 CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 203
Query: 279 -TDVAGTIGY----ILLACGG-----DIYSFSVVLLELV 307
T+ T Y I+L G DI+S +L E++
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 242
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 220 CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS- 278
C RG+ ++H +++HRD+ SN+LLN ++K+ DFGL R+ HT
Sbjct: 131 CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 187
Query: 279 -TDVAGTIGY----ILLACGG-----DIYSFSVVLLELV 307
T+ T Y I+L G DI+S +L E++
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI + M G L D++R +++ + C A+G+ +L R
Sbjct: 78 HVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFGL +L+ E + +I +
Sbjct: 137 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 194 RIYTHQSDVWSYGVTVWELM 213
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI+ + M G L D++R +++ + C A+G+ +L R
Sbjct: 78 HVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFGL +L+ E + +I +
Sbjct: 137 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 194 RIYTHQSDVWSYGVTVWELM 213
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 220 CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS- 278
C RG+ ++H +++HRD+ SN+LLN ++K+ DFGL R+ HT
Sbjct: 127 CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 183
Query: 279 -TDVAGTIGY----ILLACGG-----DIYSFSVVLLELV 307
T+ T Y I+L G DI+S +L E++
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI+ + M G L D++R +++ + C A+G+ +L R
Sbjct: 81 HVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFGL +L+ E + +I +
Sbjct: 140 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 197 RIYTHQSDVWSYGVTVWELM 216
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI+ + M G L D++R +++ + C A+G+ +L R
Sbjct: 85 HVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFGL +L+ E + +I +
Sbjct: 144 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 201 RIYTHQSDVWSYGVTVWELM 220
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI+ + M G L D++R +++ + C A+G+ +L R
Sbjct: 79 HVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 137
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFGL +L+ E + +I +
Sbjct: 138 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 194
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 195 RIYTHQSDVWSYGVTVWELM 214
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI + M G L D++R +++ + C A+G+ +L R
Sbjct: 88 HVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 146
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFGL +L+ E + +I +
Sbjct: 147 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 203
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 204 RIYTHQSDVWSYGVTVWELM 223
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI+ + M G L D++R +++ + C A+G+ +L R
Sbjct: 82 HVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 140
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFGL +L+ E + +I +
Sbjct: 141 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 197
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 198 RIYTHQSDVWSYGVTVWELM 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI+ + M G L D++R +++ + C A+G+ +L R
Sbjct: 80 HVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFGL +L+ E + +I +
Sbjct: 139 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 196 RIYTHQSDVWSYGVTVWELM 215
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI + M G L D++R +++ + C A+G+ +L R
Sbjct: 103 HVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 161
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFGL +L+ E + +I +
Sbjct: 162 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 218
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 219 RIYTHQSDVWSYGVTVWELM 238
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 127
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S TD+ GT+ Y+ +
Sbjct: 128 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI + M G L D++R +++ + C A+G+ +L R
Sbjct: 78 HVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFGL +L+ E + +I +
Sbjct: 137 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 194 RIYTHQSDVWSYGVTVWELM 213
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI + M G L D++R +++ + C A+G+ +L R
Sbjct: 81 HVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFGL +L+ E + +I +
Sbjct: 140 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 197 RIYTHQSDVWSYGVTVWELM 216
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI + M G L D++R +++ + C A+G+ +L R
Sbjct: 81 HVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFGL +L+ E + +I +
Sbjct: 140 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 197 RIYTHQSDVWSYGVTVWELM 216
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI + M G L D++R +++ + C A+G+ +L R
Sbjct: 78 HVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFGL +L+ E + +I +
Sbjct: 137 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 194 RIYTHQSDVWSYGVTVWELM 213
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI + M G L D++R +++ + C A+G+ +L R
Sbjct: 81 HVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFGL +L+ E + +I +
Sbjct: 140 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 197 RIYTHQSDVWSYGVTVWELM 216
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGT 284
TA ++ L + IIHRD+ NILLNED ++++DFG +++S + + + GT
Sbjct: 139 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 285 IGYI---LL----AC-GGDIYSFSVVLLELV 307
Y+ LL AC D+++ ++ +LV
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLV 229
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 220 CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS- 278
C RG+ ++H +++HRD+ SN+LLN ++K+ DFGL R+ HT
Sbjct: 129 CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGF 185
Query: 279 -TDVAGTIGY----ILLACGG-----DIYSFSVVLLELV 307
T+ T Y I+L G DI+S +L E++
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 128
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S TD+ GT+ Y+ +
Sbjct: 129 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRM 183
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI + M G L D++R +++ + C A+G+ +L R
Sbjct: 85 HVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFGL +L+ E + +I +
Sbjct: 144 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 201 RIYTHQSDVWSYGVTVWELM 220
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 127
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S TD+ GT+ Y+ +
Sbjct: 128 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI + M G L D++R +++ + C A+G+ +L R
Sbjct: 72 HVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 130
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFGL +L+ E + +I +
Sbjct: 131 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 187
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 188 RIYTHQSDVWSYGVTVWELM 207
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI + M G L D++R +++ + C A+G+ +L R
Sbjct: 80 HVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFGL +L+ E + +I +
Sbjct: 139 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 196 RIYTHQSDVWSYGVTVWELM 215
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 132
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S TD+ GT+ Y+ +
Sbjct: 133 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRM 187
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGT 284
TA ++ L + IIHRD+ NILLNED ++++DFG +++S + + + GT
Sbjct: 135 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 285 IGYI---LL----AC-GGDIYSFSVVLLELV 307
Y+ LL AC D+++ ++ +LV
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLV 225
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI + M G L D++R +++ + C A+G+ +L R
Sbjct: 78 HVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFGL +L+ E + +I +
Sbjct: 137 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 194 RIYTHQSDVWSYGVTVWELM 213
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI + M G L D++R +++ + C A+G+ +L R
Sbjct: 84 HVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 142
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFGL +L+ E + +I +
Sbjct: 143 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 199
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 200 RIYTHQSDVWSYGVTVWELM 219
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 220 CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS- 278
C RG+ ++H +++HRD+ SN+LLN ++K+ DFGL R+ HT
Sbjct: 129 CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 185
Query: 279 -TDVAGTIGY----ILLACGG-----DIYSFSVVLLELV 307
T+ T Y I+L G DI+S +L E++
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 220 CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS- 278
C RG+ ++H +++HRD+ SN+LLN ++K+ DFGL R+ HT
Sbjct: 125 CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 181
Query: 279 -TDVAGTIGY----ILLACGG-----DIYSFSVVLLELV 307
T+ T Y I+L G DI+S +L E++
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 220
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 220 CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS- 278
C RG+ ++H +++HRD+ SN+LLN ++K+ DFGL R+ HT
Sbjct: 132 CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 188
Query: 279 -TDVAGTIGY----ILLACGG-----DIYSFSVVLLELV 307
T+ T Y I+L G DI+S +L E++
Sbjct: 189 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 227
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI + M G L D++R +++ + C A+G+ +L R
Sbjct: 85 HVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFGL +L+ E + +I +
Sbjct: 144 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 201 RIYTHQSDVWSYGVTVWELM 220
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 220 CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS- 278
C RG+ ++H +++HRD+ SN+LLN ++K+ DFGL R+ HT
Sbjct: 133 CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 189
Query: 279 -TDVAGTIGY----ILLACGG-----DIYSFSVVLLELV 307
T+ T Y I+L G DI+S +L E++
Sbjct: 190 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 228
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 220 CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS- 278
C RG+ ++H +++HRD+ SN+LLN ++K+ DFGL R+ HT
Sbjct: 124 CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 180
Query: 279 -TDVAGTIGY----ILLACGG-----DIYSFSVVLLELV 307
T+ T Y I+L G DI+S +L E++
Sbjct: 181 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 219
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 18/138 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIAC------GTARGITFLHHR 236
NIV+L+G C + IV E + G +LR + + A G+ +L +
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK 232
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTST---------DVAGTIGY 287
IHRD+ A N L+ E +K+SDFG+ R +D S + Y
Sbjct: 233 C---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNY 289
Query: 288 ILLACGGDIYSFSVVLLE 305
+ D++SF ++L E
Sbjct: 290 GRYSSESDVWSFGILLWE 307
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 220 CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS- 278
C RG+ ++H +++HRD+ SN+LLN ++K+ DFGL R+ HT
Sbjct: 147 CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 203
Query: 279 -TDVAGTIGY----ILLACGG-----DIYSFSVVLLELV 307
T+ T Y I+L G DI+S +L E++
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 242
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 220 CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS- 278
C RG+ ++H +++HRD+ SN+LLN ++K+ DFGL R+ HT
Sbjct: 131 CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 279 -TDVAGTIGY----ILLACGG-----DIYSFSVVLLELV 307
T+ T Y I+L G DI+S +L E++
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 220 CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS- 278
C RG+ ++H +++HRD+ SN+LLN ++K+ DFGL R+ HT
Sbjct: 125 CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 181
Query: 279 -TDVAGTIGY----ILLACGG-----DIYSFSVVLLELV 307
T+ T Y I+L G DI+S +L E++
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 220
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 220 CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS- 278
C RG+ ++H +++HRD+ SN+LLN ++K+ DFGL R+ HT
Sbjct: 135 CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 191
Query: 279 -TDVAGTIGY----ILLACGG-----DIYSFSVVLLELV 307
T+ T Y I+L G DI+S +L E++
Sbjct: 192 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 230
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 220 CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS- 278
C RG+ ++H +++HRD+ SN+LLN ++K+ DFGL R+ HT
Sbjct: 127 CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 183
Query: 279 -TDVAGTIGY----ILLACGG-----DIYSFSVVLLELV 307
T+ T Y I+L G DI+S +L E++
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 220 CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS- 278
C RG+ ++H +++HRD+ SN+LLN ++K+ DFGL R+ HT
Sbjct: 127 CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 183
Query: 279 -TDVAGTIGY----ILLACGG-----DIYSFSVVLLELV 307
T+ T Y I+L G DI+S +L E++
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 220 CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS- 278
C RG+ ++H +++HRD+ SN+LLN ++K+ DFGL R+ HT
Sbjct: 131 CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 279 -TDVAGTIGY----ILLACGG-----DIYSFSVVLLELV 307
T+ T Y I+L G DI+S +L E++
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 220 CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS- 278
C RG+ ++H +++HRD+ SN+LLN ++K+ DFGL R+ HT
Sbjct: 129 CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 185
Query: 279 -TDVAGTIGY----ILLACGG-----DIYSFSVVLLELV 307
T+ T Y I+L G DI+S +L E++
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGT 284
TA ++ L + IIHRD+ NILLNED ++++DFG +++S + + + GT
Sbjct: 115 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 285 IGYI---LL----AC-GGDIYSFSVVLLELV 307
Y+ LL AC D+++ ++ +LV
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLV 205
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 220 CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS- 278
C RG+ ++H +++HRD+ SN+LLN ++K+ DFGL R+ HT
Sbjct: 131 CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 279 -TDVAGTIGY----ILLACGG-----DIYSFSVVLLELV 307
T+ T Y I+L G DI+S +L E++
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGT 284
TA ++ L + IIHRD+ NILLNED ++++DFG +++S + + + GT
Sbjct: 116 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 285 IGYI---LL----AC-GGDIYSFSVVLLELV 307
Y+ LL AC D+++ ++ +LV
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLV 206
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 40/207 (19%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAK-----------HCIIACGTARGIT 231
+I++L Y +V E G +N +L+N+ K H II G+
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIIT-----GML 126
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLV-RLISDCESHTSTDVAGTIGYILL 290
+LH I+HRD+ SN+LL + +K++DFGL +L E H + + GT YI
Sbjct: 127 YLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISP 181
Query: 291 ACG--------GDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPS 342
D++S + L+I + P + V L+ +L Y PS
Sbjct: 182 EIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTD--------TVKNTLNKVVLADYEMPS 233
Query: 343 MLKM--LQIVVGCIFDNPTTRPTMLRV 367
L + ++ + NP R ++ V
Sbjct: 234 FLSIEAKDLIHQLLRRNPADRLSLSSV 260
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGT 284
TA ++ L + IIHRD+ NILLNED ++++DFG +++S + + + GT
Sbjct: 113 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 285 IGYI---LL----AC-GGDIYSFSVVLLELV 307
Y+ LL AC D+++ ++ +LV
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLV 203
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGT 284
TA ++ L + IIHRD+ NILLNED ++++DFG +++S + + + GT
Sbjct: 114 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 285 IGYI---LL----AC-GGDIYSFSVVLLELV 307
Y+ LL AC D+++ ++ +LV
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLV 204
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGT 284
TA ++ L + IIHRD+ NILLNED ++++DFG +++S + + + GT
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 285 IGYI---LL----AC-GGDIYSFSVVLLELV 307
Y+ LL AC D+++ ++ +LV
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++AG +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVA 184
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGT 284
TA ++ L + IIHRD+ NILLNED ++++DFG +++S + + + GT
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 285 IGYI---LL----AC-GGDIYSFSVVLLELV 307
Y+ LL AC D+++ ++ +LV
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++AG +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVA 184
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGT 284
TA ++ L + IIHRD+ NILLNED ++++DFG +++S + + + GT
Sbjct: 135 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 285 IGYI---LL----AC-GGDIYSFSVVLLELV 307
Y+ LL AC D+++ ++ +LV
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLV 225
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGT 284
TA ++ L + IIHRD+ NILLNED ++++DFG +++S + + + GT
Sbjct: 139 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 285 IGYI---LL----AC-GGDIYSFSVVLLELV 307
Y+ LL AC D+++ ++ +LV
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLV 229
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGT 284
TA ++ L + IIHRD+ NILLNED ++++DFG +++S + + + GT
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 285 IGYI---LL----AC-GGDIYSFSVVLLELV 307
Y+ LL AC D+++ ++ +LV
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGT 284
TA ++ L + IIHRD+ NILLNED ++++DFG +++S + + + GT
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 285 IGYI---LL----AC-GGDIYSFSVVLLELV 307
Y+ LL AC D+++ ++ +LV
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLV 226
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGT 284
TA ++ L + IIHRD+ NILLNED ++++DFG +++S + + + GT
Sbjct: 141 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 285 IGYI---LL----AC-GGDIYSFSVVLLELV 307
Y+ LL AC D+++ ++ +LV
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLV 231
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGT 284
TA ++ L + IIHRD+ NILLNED ++++DFG +++S + + + GT
Sbjct: 143 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 285 IGYI---LL----AC-GGDIYSFSVVLLELV 307
Y+ LL AC D+++ ++ +LV
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLV 233
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGT 284
TA ++ L + IIHRD+ NILLNED ++++DFG +++S + + + GT
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 285 IGYI---LL----AC-GGDIYSFSVVLLELV 307
Y+ LL AC D+++ ++ +LV
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLV 226
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGT 284
TA ++ L + IIHRD+ NILLNED ++++DFG +++S + + + GT
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 285 IGYI---LL----AC-GGDIYSFSVVLLELV 307
Y+ LL AC D+++ ++ +LV
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLV 226
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGT 284
TA ++ L + IIHRD+ NILLNED ++++DFG +++S + + + GT
Sbjct: 136 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 285 IGYI---LL----AC-GGDIYSFSVVLLELV 307
Y+ LL AC D+++ ++ +LV
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLV 226
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGT 284
TA ++ L + IIHRD+ NILLNED ++++DFG +++S + + + GT
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 285 IGYI---LL----AC-GGDIYSFSVVLLELV 307
Y+ LL AC D+++ ++ +LV
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++AG +
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVA 180
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 43/212 (20%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHCIIACGTA-------RGITFLHHRFQPHIIHRDINASNI 251
+V E+ GS+ D ++N + + A RG++ LH Q +IHRDI N+
Sbjct: 104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNV 160
Query: 252 LLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI---LLACG----------GDIYS 298
LL E+ EVK+ DFG+ + +T + GT ++ ++AC D++S
Sbjct: 161 LLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVIACDENPDATYDFKSDLWS 219
Query: 299 FSVVLLELVIRKQP----------------TGPEFKDKNGGNLVDWVLDSTILNAYS-KP 341
+ +E+ P P K K ++S ++ +S +P
Sbjct: 220 LGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRP 279
Query: 342 SMLKMLQIVVGCIFDNPTTRPTMLRVQEFLEK 373
+ ++++ I D P R +++++ +++
Sbjct: 280 ATEQLMKHPF--IRDQPNERQVRIQLKDHIDR 309
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY +G + L+ +K T A +++ H +
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSK- 132
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S T + GT+ Y+ +
Sbjct: 133 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGT 284
TA ++ L + IIHRD+ NILLNED ++++DFG +++S + + + GT
Sbjct: 120 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 285 IGYI---LL----AC-GGDIYSFSVVLLELV 307
Y+ LL AC D+++ ++ +LV
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLV 210
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI + M G L D++R +++ + C A G+ +L R
Sbjct: 75 HVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDR 133
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFGL +L+ E + +I +
Sbjct: 134 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 190
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 191 RIYTHQSDVWSYGVTVWELM 210
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 21/103 (20%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS------- 278
T R + LH ++IHRD+ SN+L+N + ++KV DFGL R+I + + S
Sbjct: 121 TLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 279 --TDVAGTIGY----ILLACGG-----DIYSFSVVLLELVIRK 310
T+ T Y ++L D++S +L EL +R+
Sbjct: 178 GMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 220 CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS- 278
C RG+ ++H +++HRD+ SN+L+N ++K+ DFGL R+ HT
Sbjct: 147 CYFLYQILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGF 203
Query: 279 -TDVAGTIGY----ILLACGG-----DIYSFSVVLLELV 307
T+ T Y I+L G DI+S +L E++
Sbjct: 204 LTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 242
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 15/98 (15%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTI 285
TA+ ++ L H Q +II+RD+ N+LL++D V++SD GL + ++ T AGT
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG-YAGTP 353
Query: 286 GY----ILLACGGDIYSFS-------VVLLELVIRKQP 312
G+ +LL G+ Y FS V L E++ + P
Sbjct: 354 GFMAPELLL---GEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 98/218 (44%), Gaps = 43/218 (19%)
Query: 132 QRGNRQQHLSINLAMFEPSLGKLTYDQIVAG----TNKFY-----EKNVIRGDD------ 176
+R + Q L I + LGK ++ ++ TN+F+ +K+V+ DD
Sbjct: 6 ERPSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTM 65
Query: 177 -----FGIAFKNIVQLLGYCPVGEKK--LIVYEYMVKGSLNDWLR-----NQAKHCIIAC 224
+A+++ +C K+ V EY+ G L ++ + ++ A
Sbjct: 66 VEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAA 125
Query: 225 GTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR--LISDCESHTSTDVA 282
G+ FLH + I++RD+ NILL++D +K++DFG+ + ++ D +++
Sbjct: 126 EIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNX---FC 179
Query: 283 GTIGYILLAC--------GGDIYSFSVVLLELVIRKQP 312
GT YI D +SF V+L E++I + P
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 21/103 (20%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS------- 278
T R + LH ++IHRD+ SN+L+N + ++KV DFGL R+I + + S
Sbjct: 121 TLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 279 --TDVAGTIGY----ILLACGG-----DIYSFSVVLLELVIRK 310
T+ T Y ++L D++S +L EL +R+
Sbjct: 178 GMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 15/98 (15%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTI 285
TA+ ++ L H Q +II+RD+ N+LL++D V++SD GL + ++ T AGT
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG-YAGTP 353
Query: 286 GY----ILLACGGDIYSFS-------VVLLELVIRKQP 312
G+ +LL G+ Y FS V L E++ + P
Sbjct: 354 GFMAPELLL---GEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 15/98 (15%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTI 285
TA+ ++ L H Q +II+RD+ N+LL++D V++SD GL + ++ T AGT
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG-YAGTP 353
Query: 286 GY----ILLACGGDIYSFS-------VVLLELVIRKQP 312
G+ +LL G+ Y FS V L E++ + P
Sbjct: 354 GFMAPELLL---GEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 15/98 (15%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTI 285
TA+ ++ L H Q +II+RD+ N+LL++D V++SD GL + ++ T AGT
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG-YAGTP 353
Query: 286 GY----ILLACGGDIYSFS-------VVLLELVIRKQP 312
G+ +LL G+ Y FS V L E++ + P
Sbjct: 354 GFMAPELLL---GEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G++F H HR ++HRD+ N+L+N + +K++DFGL R T T T+
Sbjct: 114 QGLSFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLW 168
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 23/145 (15%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 128
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS--TDVAGTIGYI------- 288
+IHRDI N+LL E+K++DFG C + +S T ++GT+ Y+
Sbjct: 129 --RVIHRDIKPENLLLGSAGELKIADFGW-----SCHAPSSRRTTLSGTLDYLPPEMIEG 181
Query: 289 -LLACGGDIYSFSVVLLELVIRKQP 312
+ D++S V+ E ++ K P
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT+ ++ G +
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEMTGYVA 191
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT+ ++ G +
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEMTGYVA 191
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT+ ++ G +
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEMTGYVA 191
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 97/244 (39%), Gaps = 27/244 (11%)
Query: 152 GKLTYDQIVAGTNKFYEKNVIRGDDFG--------IAFKNIVQLLGYC--PVGEKKLIVY 201
G+ + IV K + + + DF + N++ +LG C P ++
Sbjct: 29 GRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88
Query: 202 EYMVKGSL-------NDWLRNQAKHCIIACGTARGITFLHHRFQPHIIHRDINASNILLN 254
+ GSL +++ +Q++ A ARG FLH +P I +N+ ++ ++
Sbjct: 89 HWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLH-TLEPLIPRHALNSRSVXID 147
Query: 255 EDFEVKVSDFGL-VRLISDCESHTSTDVAGTI----GYILLACGGDIYSFSVVLLELVIR 309
ED ++S + S + VA D +SF+V+L ELV R
Sbjct: 148 EDXTARISXADVKFSFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTR 207
Query: 310 KQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQE 369
+ P + G + L TI S P + K+ +I C ++P RP +
Sbjct: 208 EVPFADLSNXEIGXKVALEGLRPTIPPGIS-PHVSKLXKI---CXNEDPAKRPKFDXIVP 263
Query: 370 FLEK 373
LEK
Sbjct: 264 ILEK 267
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 147 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVA 195
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVA 184
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVA 189
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 43/218 (19%)
Query: 132 QRGNRQQHLSINLAMFEPSLGKLTYDQIVAG----TNKFY-----EKNVIRGDD------ 176
+R + Q L I LGK ++ ++ TN+F+ +K+V+ DD
Sbjct: 7 ERPSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTM 66
Query: 177 -----FGIAFKNIVQLLGYCPVGEKK--LIVYEYMVKGSLNDWLR-----NQAKHCIIAC 224
+A+++ +C K+ V EY+ G L ++ + ++ A
Sbjct: 67 VEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAA 126
Query: 225 GTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR--LISDCESHTSTDVA 282
G+ FLH + I++RD+ NILL++D +K++DFG+ + ++ D + + +
Sbjct: 127 EIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK---TNEFC 180
Query: 283 GTIGYILLAC--------GGDIYSFSVVLLELVIRKQP 312
GT YI D +SF V+L E++I + P
Sbjct: 181 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVA 189
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T T+
Sbjct: 121 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLW 175
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGT 284
TA ++ L + IIHRD+ NILLNED ++++DFG +++S + + + GT
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 285 IGYI 288
Y+
Sbjct: 198 AQYV 201
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 127
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S T++ GT+ Y+ +
Sbjct: 128 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTELCGTLDYLPPEMIEGRM 182
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGXVA 184
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T T+
Sbjct: 114 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLW 168
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T T+
Sbjct: 114 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLW 168
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T T+
Sbjct: 113 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLW 167
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T T+
Sbjct: 113 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLW 167
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR-------HTDDEMTGYVA 186
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T T+
Sbjct: 115 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLW 169
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T T+
Sbjct: 114 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLW 168
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T T+
Sbjct: 113 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLW 167
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR-------HTDDEMTGYVA 190
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T T+
Sbjct: 113 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLW 167
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI+ + M G L D++R +++ + C A+G+ +L R
Sbjct: 82 HVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 140
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFG +L+ E + +I +
Sbjct: 141 ---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 197
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 198 RIYTHQSDVWSYGVTVWELM 217
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T T+
Sbjct: 118 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLW 172
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 21/103 (20%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTI 285
T R + LH ++IHRD+ SN+L+N + ++KV DFGL R+I + + S
Sbjct: 121 TLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 286 GYILLAC------------------GGDIYSFSVVLLELVIRK 310
G + D++S +L EL +R+
Sbjct: 178 GMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI+ + M G L D++R +++ + C A+G+ +L R
Sbjct: 80 HVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFG +L+ E + +I +
Sbjct: 139 ---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 196 RIYTHQSDVWSYGVTVWELM 215
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 184
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 165 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 213
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 13/106 (12%)
Query: 198 LIVYEYMVKGSLNDWLR-----NQAKHCIIACGTARGITFLHHRFQPHIIHRDINASNIL 252
+V++ M KG L D+L ++ + I ++FLH +I+HRD+ NIL
Sbjct: 176 FLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENIL 232
Query: 253 LNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI---LLACGGD 295
L+++ ++++SDFG + E ++ GT GY+ +L C D
Sbjct: 233 LDDNMQIRLSDFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMD 276
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 184
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 130
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S D+ GT+ Y+ +
Sbjct: 131 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDDLCGTLDYLPPEMIEGRM 185
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGXVA 204
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 147 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 195
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 196
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 191
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 184
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 184
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 184
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 23/145 (15%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFLH- 234
NIV+LL K +V+E++ + L D++ A I +G+ F H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 235 HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY----ILL 290
HR ++HRD+ N+L+N + +K++DFGL R T T+ Y ILL
Sbjct: 122 HR----VLHRDLKPENLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILL 176
Query: 291 AC-----GGDIYSFSVVLLELVIRK 310
C DI+S + E+V R+
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI+ + M G L D++R +++ + C A+G+ +L R
Sbjct: 80 HVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFG +L+ E + +I +
Sbjct: 139 ---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 196 RIYTHQSDVWSYGVTVWELM 215
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 196
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 186
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTARG-----ITFLHHRF 237
NIV+L + +V EY G + D+L H + AR ++ + +
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL---VAHGRMKEKEARAKFRQIVSAVQYCH 131
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGL 266
Q +I+HRD+ A N+LL+ D +K++DFG
Sbjct: 132 QKYIVHRDLKAENLLLDGDMNIKIADFGF 160
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 196
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 189
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 184
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 135 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 183
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 186
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 159 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 207
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 184
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 184
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 189
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGT 284
TA ++ L + IIHRD+ NILLNED ++++DFG +++S + + + GT
Sbjct: 138 TAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 285 IGYI 288
Y+
Sbjct: 198 AQYV 201
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 23/145 (15%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFLH- 234
NIV+LL K +V+E++ L D++ A I +G+ F H
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 235 HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY----ILL 290
HR ++HRD+ N+L+N + +K++DFGL R T T+ Y ILL
Sbjct: 125 HR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILL 179
Query: 291 AC-----GGDIYSFSVVLLELVIRK 310
C DI+S + E+V R+
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 190
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 184
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 133 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 181
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 184
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 204
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 180
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 14/92 (15%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTARG--------ITFLH 234
NIV+L + +V EY G + D+L H + AR + + H
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL---VAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 235 HRFQPHIIHRDINASNILLNEDFEVKVSDFGL 266
+F I+HRD+ A N+LL+ D +K++DFG
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGF 159
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 155 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 203
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 133 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 181
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 146 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 194
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 14/92 (15%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTARG--------ITFLH 234
NIV+L + +V EY G + D+L H + AR + + H
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL---VAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 235 HRFQPHIIHRDINASNILLNEDFEVKVSDFGL 266
+F I+HRD+ A N+LL+ D +K++DFG
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGF 159
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 134 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 182
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI + M G L D++R +++ + C A+G+ +L R
Sbjct: 78 HVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFG +L+ E + +I +
Sbjct: 137 ---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 194 RIYTHQSDVWSYGVTVWELM 213
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 21/146 (14%)
Query: 178 GIAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGIT 231
G+ + +LLG C +L+ + M G L D +R ++ + C A+G++
Sbjct: 75 GVGSPYVSRLLGICLTSTVQLVT-QLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMS 133
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLA 291
+L ++HRD+ A N+L+ VK++DFGL RL+ E+ D G + +A
Sbjct: 134 YLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHAD-GGKVPIKWMA 189
Query: 292 C----------GGDIYSFSVVLLELV 307
D++S+ V + EL+
Sbjct: 190 LESILRRRFTHQSDVWSYGVTVWELM 215
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 14/92 (15%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTARG--------ITFLH 234
NIV+L + +V EY G + D+L H + AR + + H
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL---VAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 235 HRFQPHIIHRDINASNILLNEDFEVKVSDFGL 266
+F I+HRD+ A N+LL+ D +K++DFG
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGF 159
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 14/92 (15%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTARG--------ITFLH 234
NIV+L + +V EY G + D+L H + AR + + H
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL---VAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 235 HRFQPHIIHRDINASNILLNEDFEVKVSDFGL 266
+F I+HRD+ A N+LL+ D +K++DFG
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGF 159
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 186
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI + M G L D++R +++ + C A+G+ +L R
Sbjct: 80 HVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFG +L+ E + +I +
Sbjct: 139 ---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 196 RIYTHQSDVWSYGVTVWELM 215
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 14/92 (15%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTARG--------ITFLH 234
NIV+L + +V EY G + D+L H + AR + + H
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL---VAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 235 HRFQPHIIHRDINASNILLNEDFEVKVSDFGL 266
+F I+HRD+ A N+LL+ D +K++DFG
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGF 159
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 204
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 155 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 203
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 95 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 153
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S D+ GT+ Y+ +
Sbjct: 154 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDDLCGTLDYLPPEMIEGRM 208
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 180
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 180
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 14/92 (15%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTARG--------ITFLH 234
NIV+L + +V EY G + D+L H + AR + + H
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL---VAHGWMKEKEARAKFRQIVSAVQYCH 123
Query: 235 HRFQPHIIHRDINASNILLNEDFEVKVSDFGL 266
+F I+HRD+ A N+LL+ D +K++DFG
Sbjct: 124 QKF---IVHRDLKAENLLLDADMNIKIADFGF 152
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 14/99 (14%)
Query: 220 CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS- 278
C RG+ ++H +++HRD+ SN+LLN ++K+ DFGL R+ HT
Sbjct: 131 CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 279 -TDVAGTIGY----ILLACGG-----DIYSFSVVLLELV 307
+ T Y I+L G DI+S +L E++
Sbjct: 188 LXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 14/99 (14%)
Query: 220 CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS- 278
C RG+ ++H +++HRD+ SN+LLN ++K+ DFGL R+ HT
Sbjct: 132 CYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 188
Query: 279 -TDVAGTIGY----ILLACGG-----DIYSFSVVLLELV 307
+ T Y I+L G DI+S +L E++
Sbjct: 189 LXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 227
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 159 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGYVA 207
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 23/145 (15%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFLH- 234
NIV+LL K +V+E++ L D++ A I +G+ F H
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 235 HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY----ILL 290
HR ++HRD+ N+L+N + +K++DFGL R T T+ Y ILL
Sbjct: 124 HR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLWYRAPEILL 178
Query: 291 AC-----GGDIYSFSVVLLELVIRK 310
C DI+S + E+V R+
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 19/140 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQ-----AKHCIIAC-GTARGITFLHHR 236
++ +LLG C +LI + M G L D++R +++ + C A+G+ +L R
Sbjct: 85 HVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD---------VAGTIGY 287
++HRD+ A N+L+ VK++DFG +L+ E + +I +
Sbjct: 144 ---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 288 ILLACGGDIYSFSVVLLELV 307
+ D++S+ V + EL+
Sbjct: 201 RIYTHQSDVWSYGVTVWELM 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 190
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 27/178 (15%)
Query: 162 GTNKFYEKNVIRGDDFGIAFKN--IVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKH 219
GT K + ++R N IV+L+G C E ++V E G L+ +L + +
Sbjct: 48 GTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREE 106
Query: 220 CIIAC------GTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDC 273
++ + G+ +L + + +HRD+ A N+LL K+SDFGL + +
Sbjct: 107 IPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163
Query: 274 ESHTSTDVAGT----------IGYILLACGGDIYSFSVVLLELVI-----RKQPTGPE 316
+S+ + AG I + + D++S+ V + E + K+ GPE
Sbjct: 164 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE 221
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVA 190
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DFGL R HT ++ G +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCR-------HTDDEMTGYVA 184
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 24/164 (14%)
Query: 184 IVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHC-----IIACGTARGITFLHHRFQ 238
I+++ G ++ ++ +Y+ G L LR + A + +LH +
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK-- 125
Query: 239 PHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLACGG---- 294
II+RD+ NILL+++ +K++DFG + + D + + GT YI
Sbjct: 126 -DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV----TYXLCGTPDYIAPEVVSTKPY 180
Query: 295 ----DIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTI 334
D +SF +++ E++ P F D N + +L++ +
Sbjct: 181 NKSIDWWSFGILIYEMLAGYTP----FYDSNTMKTYEKILNAEL 220
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTARG-----ITFLHHRF 237
NIV+L + ++ EY G + D+L H + AR ++ + +
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYL---VAHGRMKEKEARSKFRQIVSAVQYCH 128
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGL 266
Q I+HRD+ A N+LL+ D +K++DFG
Sbjct: 129 QKRIVHRDLKAENLLLDADMNIKIADFGF 157
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 16/104 (15%)
Query: 183 NIVQLLGYCPVGEKK-------LIVYEYMVKGSLNDWLRNQAKHCIIACGT--------A 227
NIVQ +G+++ ++ + KG L ++L+ ++C T
Sbjct: 87 NIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTC 146
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
R + +H R +P IIHRD+ N+LL+ +K+ DFG IS
Sbjct: 147 RAVQHMH-RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS 189
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 40/162 (24%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKH---------------------- 219
+NIV LLG C + +++EY G L ++LR++ +
Sbjct: 109 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 220 ------CIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR-LISD 272
A A+G+ FL + +HRD+ A N+L+ VK+ DFGL R ++SD
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD 225
Query: 273 CESHTSTDVAGTIGYI--------LLACGGDIYSFSVVLLEL 306
+ + ++ + D++S+ ++L E+
Sbjct: 226 SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEI 267
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 68 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 126
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S T + GT+ Y+ +
Sbjct: 127 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 181
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 182 HDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR-LISDCESHT--STDVAGT 284
RG+ ++H +IHRD+ SN+L+NE+ E+K+ DFG+ R L + H T+ T
Sbjct: 170 RGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 285 IGY----ILLAC-----GGDIYSFSVVLLELVIRKQ 311
Y ++L+ D++S + E++ R+Q
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 23/200 (11%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWL-----RNQAKHCIIACGTARGITFLHHRF 237
+I++L +V EY+ G L D++ ++ + + G+ + H
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCE----SHTSTDVAGT---IGYILL 290
++HRD+ N+LL+ K++DFGL ++SD E S S + A G +
Sbjct: 137 ---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYA 193
Query: 291 ACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNA-YSKPSMLKMLQI 349
DI+S V+L L+ P F D + L + D Y PS++ +L+
Sbjct: 194 GPEVDIWSSGVILYALLCGTLP----FDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKH 249
Query: 350 VVGCIFDNPTTRPTMLRVQE 369
++ +P R T+ ++E
Sbjct: 250 MLQV---DPMKRATIKDIRE 266
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 131
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S T + GT+ Y+ +
Sbjct: 132 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 186
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 127
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S T + GT+ Y+ +
Sbjct: 128 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTXLCGTLDYLPPEMIEGRM 182
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTARG-----ITFLHHRF 237
NIV+L + ++ EY G + D+L H + AR ++ + +
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYL---VAHGRMKEKEARSKFRQIVSAVQYCH 131
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGL 266
Q I+HRD+ A N+LL+ D +K++DFG
Sbjct: 132 QKRIVHRDLKAENLLLDADMNIKIADFGF 160
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 95 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 153
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S T + GT+ Y+ +
Sbjct: 154 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 208
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 66 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 124
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S T + GT+ Y+ +
Sbjct: 125 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 179
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 180 HDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 130
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S T + GT+ Y+ +
Sbjct: 131 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY +G + L+ +K T A +++ H +
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSK- 132
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S + GT+ Y+ +
Sbjct: 133 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLXGTLDYLPPEMIEGRM 187
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 22/158 (13%)
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLI-------SDCE 274
IACG + +L R + IHRD+ A N +L ED V V+DFGL R I C
Sbjct: 146 IACG----MEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCA 198
Query: 275 SHTSTD--VAGTIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDS 332
S ++ L D+++F V + E++ R Q + + ++++
Sbjct: 199 SKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP---YAGIENAEIYNYLIGG 255
Query: 333 TILNAYSKPSMLKMLQIVVGCIFDNPTTRP--TMLRVQ 368
L + M ++ ++ C +P RP T LR++
Sbjct: 256 NRLKQPPE-CMEEVYDLMYQCWSADPKQRPSFTCLRME 292
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 19/113 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ FLH HR ++HRD+ NIL+ ++K++DFGL R+ S + TS V T+
Sbjct: 131 RGLDFLHSHR----VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS--VVVTLW 184
Query: 287 Y----ILL----ACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLD 331
Y +LL A D++S + E+ RK P F+ + + + +LD
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK----PLFRGSSDVDQLGKILD 233
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 127
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S T + GT+ Y+ +
Sbjct: 128 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 182
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 132
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S T + GT+ Y+ +
Sbjct: 133 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 130
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S T + GT+ Y+ +
Sbjct: 131 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 15/96 (15%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR-LISDCESHT--STDVAGT 284
RG+ ++H +IHRD+ SN+L+NE+ E+K+ DFG+ R L + H T+ T
Sbjct: 169 RGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 285 IGY----ILLAC-----GGDIYSFSVVLLELVIRKQ 311
Y ++L+ D++S + E++ R+Q
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 19/113 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ FLH HR ++HRD+ NIL+ ++K++DFGL R+ S + TS V T+
Sbjct: 131 RGLDFLHSHR----VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS--VVVTLW 184
Query: 287 Y----ILL----ACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLD 331
Y +LL A D++S + E+ RK P F+ + + + +LD
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK----PLFRGSSDVDQLGKILD 233
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----------NQAKHCIIACGTARGIT 231
+N+V+ G+ G + + EY G L D + + H ++A G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 118
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGTIGYI-- 288
+LH I HRDI N+LL+E +K+SDFGL + + + GT+ Y+
Sbjct: 119 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 289 -------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
A D++S +VL ++ + P + + DW T LN + K
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSXQEYSDWKEKKTYLNPWKKI 233
Query: 342 SMLKMLQIVVGCIFDNPTTRPTMLRVQE 369
L ++ + +NP+ R T+ +++
Sbjct: 234 DSAP-LALLHKILVENPSARITIPDIKK 260
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 19/113 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ FLH HR ++HRD+ NIL+ ++K++DFGL R+ S + TS V T+
Sbjct: 131 RGLDFLHSHR----VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS--VVVTLW 184
Query: 287 Y----ILL----ACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLD 331
Y +LL A D++S + E+ RK P F+ + + + +LD
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK----PLFRGSSDVDQLGKILD 233
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ D+GL R HT ++ G +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLAR-------HTDDEMTGYVA 184
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 71/160 (44%), Gaps = 28/160 (17%)
Query: 215 NQAKHCIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCE 274
+ + A + G+ FLH R II+RD+ N++L+ + +K++DFG+ C+
Sbjct: 118 KEPQAVFYAAEISIGLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGM------CK 168
Query: 275 SH-----TSTDVAGTIGYIL--------LACGGDIYSFSVVLLELVIRKQPTGPEFKDKN 321
H T+ + GT YI D +++ V+L E++ + P F ++
Sbjct: 169 EHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ----PPFDGED 224
Query: 322 GGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTR 361
L +++ + +Y K + + I G + +P R
Sbjct: 225 EDELFQSIMEHNV--SYPKSLSKEAVSICKGLMTKHPAKR 262
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 20/125 (16%)
Query: 198 LIVYEYMVKGSLNDWL---RNQAKHCIIAC----GTARGITFLHHRFQPHIIHRDINASN 250
I E+ KG+L W+ R + ++A +G+ ++H + +IHRD+ SN
Sbjct: 110 FIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSN 166
Query: 251 ILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL--------LACGGDIYSFSVV 302
I L + +VK+ DFGLV + + T + GT+ Y+ D+Y+ ++
Sbjct: 167 IFLVDTKQVKIGDFGLVTSLKNDGKRTRS--KGTLRYMSPEQISSQDYGKEVDLYALGLI 224
Query: 303 LLELV 307
L EL+
Sbjct: 225 LAELL 229
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 86 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 144
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S T + GT+ Y+ +
Sbjct: 145 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 199
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 200 HDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWL----RNQAKHCIIACGT-ARGITFLHHRF 237
NIV+L + +V EY G + D+L R + K + + H +F
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF 133
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGL 266
I+HRD+ A N+LL+ D +K++DFG
Sbjct: 134 ---IVHRDLKAENLLLDADXNIKIADFGF 159
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI 288
G+ +H+RF +++RD+ +NILL+E V++SD GL S + H S G +
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPE 360
Query: 289 LLACG------GDIYSFSVVLLELVIRKQP-TGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
+L G D +S +L +L+ P + KDK+ + + + + +++S P
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFS-P 419
Query: 342 SMLKMLQ 348
+ +L+
Sbjct: 420 ELRSLLE 426
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI 288
G+ +H+RF +++RD+ +NILL+E V++SD GL S + H S G +
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPE 360
Query: 289 LLACG------GDIYSFSVVLLELVIRKQP-TGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
+L G D +S +L +L+ P + KDK+ + + + + +++S P
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFS-P 419
Query: 342 SMLKMLQ 348
+ +L+
Sbjct: 420 ELRSLLE 426
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----------NQAKHCIIACGTARGIT 231
+N+V+ G+ G + + EY G L D + + H ++A G+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 119
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGTIGYI-- 288
+LH I HRDI N+LL+E +K+SDFGL + + + GT+ Y+
Sbjct: 120 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 289 -------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
A D++S +VL ++ + P + + DW T LN + K
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEYSDWKEKKTYLNPWKKI 234
Query: 342 SMLKMLQIVVGCIFDNPTTRPTMLRVQE 369
L ++ + +NP+ R T+ +++
Sbjct: 235 DSAP-LALLHKILVENPSARITIPDIKK 261
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI 288
G+ +H+RF +++RD+ +NILL+E V++SD GL S + H S G +
Sbjct: 304 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPE 360
Query: 289 LLACG------GDIYSFSVVLLELVIRKQP-TGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
+L G D +S +L +L+ P + KDK+ + + + + +++S P
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFS-P 419
Query: 342 SMLKMLQ 348
+ +L+
Sbjct: 420 ELRSLLE 426
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI 288
G+ +H+RF +++RD+ +NILL+E V++SD GL S + H S G +
Sbjct: 303 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPE 359
Query: 289 LLACG------GDIYSFSVVLLELVIRKQP-TGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
+L G D +S +L +L+ P + KDK+ + + + + +++S P
Sbjct: 360 VLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFS-P 418
Query: 342 SMLKMLQ 348
+ +L+
Sbjct: 419 ELRSLLE 425
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 61/150 (40%), Gaps = 23/150 (15%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR--------NQAKHCIIACGTARGITFL 233
KNIVQ LG I E + GSL+ LR N+ G+ +L
Sbjct: 65 KNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYL 124
Query: 234 HHRFQPHIIHRDINASNILLNEDFEV-KVSDFGLVRLISDCESHTSTDVAGTIGYIL--- 289
H I+HRDI N+L+N V K+SDFG + ++ T T GT+ Y+
Sbjct: 125 HDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMAPEI 180
Query: 290 -------LACGGDIYSFSVVLLELVIRKQP 312
DI+S ++E+ K P
Sbjct: 181 IDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----------NQAKHCIIACGTARGIT 231
+N+V+ G+ G + + EY G L D + + H ++A G+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 119
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGTIGYI-- 288
+LH I HRDI N+LL+E +K+SDFGL + + + GT+ Y+
Sbjct: 120 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 289 -------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
A D++S +VL ++ + P + + DW T LN + K
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEYSDWKEKKTYLNPWKKI 234
Query: 342 SMLKMLQIVVGCIFDNPTTRPTMLRVQE 369
L ++ + +NP+ R T+ +++
Sbjct: 235 DSAP-LALLHKILVENPSARITIPDIKK 261
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----------NQAKHCIIACGTARGIT 231
+N+V+ G+ G + + EY G L D + + H ++A G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 118
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGTIGYI-- 288
+LH I HRDI N+LL+E +K+SDFGL + + + GT+ Y+
Sbjct: 119 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 289 -------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
A D++S +VL ++ + P + + DW T LN + K
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEYSDWKEKKTYLNPWKKI 233
Query: 342 SMLKMLQIVVGCIFDNPTTRPTMLRVQE 369
L ++ + +NP+ R T+ +++
Sbjct: 234 DSAP-LALLHKILVENPSARITIPDIKK 260
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----------NQAKHCIIACGTARGIT 231
+N+V+ G+ G + + EY G L D + + H ++A G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 118
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGTIGYI-- 288
+LH I HRDI N+LL+E +K+SDFGL + + + GT+ Y+
Sbjct: 119 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 289 -------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
A D++S +VL ++ + P + + DW T LN + K
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEYSDWKEKKTYLNPWKKI 233
Query: 342 SMLKMLQIVVGCIFDNPTTRPTMLRVQE 369
L ++ + +NP+ R T+ +++
Sbjct: 234 DSAP-LALLHKILVENPSARITIPDIKK 260
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----------NQAKHCIIACGTARGIT 231
+N+V+ G+ G + + EY G L D + + H ++A G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 118
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGTIGYI-- 288
+LH I HRDI N+LL+E +K+SDFGL + + + GT+ Y+
Sbjct: 119 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 289 -------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
A D++S +VL ++ + P + + DW T LN + K
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEYSDWKEKKTYLNPWKKI 233
Query: 342 SMLKMLQIVVGCIFDNPTTRPTMLRVQE 369
L ++ + +NP+ R T+ +++
Sbjct: 234 DSAP-LALLHKILVENPSARITIPDIKK 260
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----------NQAKHCIIACGTARGIT 231
+N+V+ G+ G + + EY G L D + + H ++A G+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 119
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGTIGYI-- 288
+LH I HRDI N+LL+E +K+SDFGL + + + GT+ Y+
Sbjct: 120 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 176
Query: 289 -------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
A D++S +VL ++ + P + + DW T LN + K
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEYSDWKEKKTYLNPWKKI 234
Query: 342 SMLKMLQIVVGCIFDNPTTRPTMLRVQE 369
L ++ + +NP+ R T+ +++
Sbjct: 235 DSAP-LALLHKILVENPSARITIPDIKK 261
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 78/192 (40%), Gaps = 37/192 (19%)
Query: 198 LIVYEYMVKGSLNDWLRNQAKHCIIACGTAR--------GITFLHHRFQPHIIHRDINAS 249
+V EY+ G L D++ KH + AR + + H ++HRD+
Sbjct: 87 FMVMEYVSGGELFDYI---CKHGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPE 140
Query: 250 NILLNEDFEVKVSDFGLVRLISD-------CESHTSTDVAGTIGYILLACGGDIYSFSVV 302
N+LL+ K++DFGL ++SD C S G + DI+S V+
Sbjct: 141 NVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVI 200
Query: 303 LLELVIRKQPTGPE-----FKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDN 357
L L+ P E FK GG V ++ LN ++ MLQ+ +
Sbjct: 201 LYALLCGTLPFDDEHVPTLFKKIRGG--VFYI--PEYLNRSVATLLMHMLQV-------D 249
Query: 358 PTTRPTMLRVQE 369
P R T+ ++E
Sbjct: 250 PLKRATIKDIRE 261
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 62/153 (40%), Gaps = 23/153 (15%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR--------NQAKHCIIACGTARGI 230
+ KNIVQ LG I E + GSL+ LR N+ G+
Sbjct: 76 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 135
Query: 231 TFLHHRFQPHIIHRDINASNILLNEDFEV-KVSDFGLVRLISDCESHTSTDVAGTIGYIL 289
+LH I+HRDI N+L+N V K+SDFG + ++ T T GT+ Y+
Sbjct: 136 KYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMA 191
Query: 290 ----------LACGGDIYSFSVVLLELVIRKQP 312
DI+S ++E+ K P
Sbjct: 192 PEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----------NQAKHCIIACGTARGIT 231
+N+V+ G+ G + + EY G L D + + H ++A G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 118
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGTIGYI-- 288
+LH I HRDI N+LL+E +K+SDFGL + + + GT+ Y+
Sbjct: 119 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 289 -------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
A D++S +VL ++ + P + + DW T LN + K
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEYSDWKEKKTYLNPWKKI 233
Query: 342 SMLKMLQIVVGCIFDNPTTRPTMLRVQE 369
L ++ + +NP+ R T+ +++
Sbjct: 234 DSAP-LALLHKILVENPSARITIPDIKK 260
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----------NQAKHCIIACGTARGIT 231
+N+V+ G+ G + + EY G L D + + H ++A G+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 119
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGTIGYI-- 288
+LH I HRDI N+LL+E +K+SDFGL + + + GT+ Y+
Sbjct: 120 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 289 -------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
A D++S +VL ++ + P + + DW T LN + K
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEYSDWKEKKTYLNPWKKI 234
Query: 342 SMLKMLQIVVGCIFDNPTTRPTMLRVQE 369
L ++ + +NP+ R T+ +++
Sbjct: 235 DSAP-LALLHKILVENPSARITIPDIKK 261
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----------NQAKHCIIACGTARGIT 231
+N+V+ G+ G + + EY G L D + + H ++A G+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 119
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGTIGYI-- 288
+LH I HRDI N+LL+E +K+SDFGL + + + GT+ Y+
Sbjct: 120 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 289 -------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
A D++S +VL ++ + P + + DW T LN + K
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEYSDWKEKKTYLNPWKKI 234
Query: 342 SMLKMLQIVVGCIFDNPTTRPTMLRVQE 369
L ++ + +NP+ R T+ +++
Sbjct: 235 DSAP-LALLHKILVENPSARITIPDIKK 261
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----------NQAKHCIIACGTARGIT 231
+N+V+ G+ G + + EY G L D + + H ++A G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 118
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGTIGYI-- 288
+LH I HRDI N+LL+E +K+SDFGL + + + GT+ Y+
Sbjct: 119 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 289 -------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
A D++S +VL ++ + P + + DW T LN + K
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEYSDWKEKKTYLNPWKKI 233
Query: 342 SMLKMLQIVVGCIFDNPTTRPTMLRVQE 369
L ++ + +NP+ R T+ +++
Sbjct: 234 DSAP-LALLHKILVENPSARITIPDIKK 260
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----------NQAKHCIIACGTARGIT 231
+N+V+ G+ G + + EY G L D + + H ++A G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 118
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGTIGYI-- 288
+LH I HRDI N+LL+E +K+SDFGL + + + GT+ Y+
Sbjct: 119 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 289 -------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
A D++S +VL ++ + P + + DW T LN + K
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEYSDWKEKKTYLNPWKKI 233
Query: 342 SMLKMLQIVVGCIFDNPTTRPTMLRVQE 369
L ++ + +NP+ R T+ +++
Sbjct: 234 DSAP-LALLHKILVENPSARITIPDIKK 260
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----------NQAKHCIIACGTARGIT 231
+N+V+ G+ G + + EY G L D + + H ++A G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 118
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGTIGYI-- 288
+LH I HRDI N+LL+E +K+SDFGL + + + GT+ Y+
Sbjct: 119 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 289 -------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
A D++S +VL ++ + P + + DW T LN + K
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEYSDWKEKKTYLNPWKKI 233
Query: 342 SMLKMLQIVVGCIFDNPTTRPTMLRVQE 369
L ++ + +NP+ R T+ +++
Sbjct: 234 DSAP-LALLHKILVENPSARITIPDIKK 260
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----------NQAKHCIIACGTARGIT 231
+N+V+ G+ G + + EY G L D + + H ++A G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 118
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGTIGYI-- 288
+LH I HRDI N+LL+E +K+SDFGL + + + GT+ Y+
Sbjct: 119 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 289 -------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
A D++S +VL ++ + P + + DW T LN + K
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEYSDWKEKKTYLNPWKKI 233
Query: 342 SMLKMLQIVVGCIFDNPTTRPTMLRVQE 369
L ++ + +NP+ R T+ +++
Sbjct: 234 DSAP-LALLHKILVENPSARITIPDIKK 260
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 78/192 (40%), Gaps = 37/192 (19%)
Query: 198 LIVYEYMVKGSLNDWLRNQAKHCIIACGTAR--------GITFLHHRFQPHIIHRDINAS 249
+V EY+ G L D++ KH + AR + + H ++HRD+
Sbjct: 87 FMVMEYVSGGELFDYI---CKHGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPE 140
Query: 250 NILLNEDFEVKVSDFGLVRLISD-------CESHTSTDVAGTIGYILLACGGDIYSFSVV 302
N+LL+ K++DFGL ++SD C S G + DI+S V+
Sbjct: 141 NVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVI 200
Query: 303 LLELVIRKQPTGPE-----FKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDN 357
L L+ P E FK GG V ++ LN ++ MLQ+ +
Sbjct: 201 LYALLCGTLPFDDEHVPTLFKKIRGG--VFYI--PEYLNRSVATLLMHMLQV-------D 249
Query: 358 PTTRPTMLRVQE 369
P R T+ ++E
Sbjct: 250 PLKRATIKDIRE 261
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----------NQAKHCIIACGTARGIT 231
+N+V+ G+ G + + EY G L D + + H ++A G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 118
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGTIGYI-- 288
+LH I HRDI N+LL+E +K+SDFGL + + + GT+ Y+
Sbjct: 119 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 289 -------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
A D++S +VL ++ + P + + DW T LN + K
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEYSDWKEKKTYLNPWKKI 233
Query: 342 SMLKMLQIVVGCIFDNPTTRPTMLRVQE 369
L ++ + +NP+ R T+ +++
Sbjct: 234 DSAP-LALLHKILVENPSARITIPDIKK 260
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDV 281
IA + + LH + +IHRD+ SN+L+N +VK+ DFG+ + D S T
Sbjct: 158 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVD--SVAKTID 213
Query: 282 AGTIGYIL------------LACGGDIYSFSVVLLELVIRKQPT---GPEFK-------- 318
AG Y+ + DI+S + ++EL I + P G F+
Sbjct: 214 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE 273
Query: 319 -------DKNGGNLVDWVLDSTILNAYSKPSMLKMLQ 348
DK VD+ N+ +P+ +++Q
Sbjct: 274 PSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----------NQAKHCIIACGTARGIT 231
+N+V+ G+ G + + EY G L D + + H ++A G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 118
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGTIGYI-- 288
+LH I HRDI N+LL+E +K+SDFGL + + + GT+ Y+
Sbjct: 119 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 289 -------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
A D++S +VL ++ + P + + DW T LN + K
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEYSDWKEKKTYLNPWKKI 233
Query: 342 SMLKMLQIVVGCIFDNPTTRPTMLRVQE 369
L ++ + +NP+ R T+ +++
Sbjct: 234 DSAP-LALLHKILVENPSARITIPDIKK 260
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----------NQAKHCIIACGTARGIT 231
+N+V+ G+ G + + EY G L D + + H ++A G+
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 118
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGTIGYI-- 288
+LH I HRDI N+LL+E +K+SDFGL + + + GT+ Y+
Sbjct: 119 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 289 -------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
A D++S +VL ++ + P + + DW T LN + K
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEYSDWKEKKTYLNPWKKI 233
Query: 342 SMLKMLQIVVGCIFDNPTTRPTMLRVQE 369
L ++ + +NP+ R T+ +++
Sbjct: 234 DSAP-LALLHKILVENPSARITIPDIKK 260
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----------NQAKHCIIACGTARGIT 231
+N+V+ G+ G + + EY G L D + + H ++A G+
Sbjct: 63 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 117
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGTIGYI-- 288
+LH I HRDI N+LL+E +K+SDFGL + + + GT+ Y+
Sbjct: 118 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
Query: 289 -------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
A D++S +VL ++ + P + + DW T LN + K
Sbjct: 175 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEYSDWKEKKTYLNPWKKI 232
Query: 342 SMLKMLQIVVGCIFDNPTTRPTMLRVQE 369
L ++ + +NP+ R T+ +++
Sbjct: 233 DSAP-LALLHKILVENPSARITIPDIKK 259
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----------NQAKHCIIACGTARGIT 231
+N+V+ G+ G + + EY G L D + + H ++A G+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 119
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGTIGYI-- 288
+LH I HRDI N+LL+E +K+SDFGL + + + GT+ Y+
Sbjct: 120 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 289 -------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
A D++S +VL ++ + P + + DW T LN + K
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEYSDWKEKKTYLNPWKKI 234
Query: 342 SMLKMLQIVVGCIFDNPTTRPTMLRVQE 369
L ++ + +NP+ R T+ +++
Sbjct: 235 DSAP-LALLHKILVENPSARITIPDIKK 261
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----------NQAKHCIIACGTARGIT 231
+N+V+ G+ G + + EY G L D + + H ++A G+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 119
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGTIGYI-- 288
+LH I HRDI N+LL+E +K+SDFGL + + + GT+ Y+
Sbjct: 120 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 289 -------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
A D++S +VL ++ + P + + DW T LN + K
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEYSDWKEKKTYLNPWKKI 234
Query: 342 SMLKMLQIVVGCIFDNPTTRPTMLRVQE 369
L ++ + +NP+ R T+ +++
Sbjct: 235 DSAP-LALLHKILVENPSARITIPDIKK 261
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 31/208 (14%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----------NQAKHCIIACGTARGIT 231
+N+V+ G+ G + + EY G L D + + H ++A G+
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA-----GVV 119
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS-DCESHTSTDVAGTIGYI-- 288
+LH I HRDI N+LL+E +K+SDFGL + + + GT+ Y+
Sbjct: 120 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 289 -------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKP 341
A D++S +VL ++ + P + + DW T LN + K
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPW--DQPSDSCQEYSDWKEKKTYLNPWKKI 234
Query: 342 SMLKMLQIVVGCIFDNPTTRPTMLRVQE 369
L ++ + +NP+ R T+ +++
Sbjct: 235 DSAP-LALLHKILVENPSARITIPDIKK 261
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T+
Sbjct: 116 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLW 170
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T+
Sbjct: 116 QGLAFCHSHR----VLHRDLKPENLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLW 170
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T+
Sbjct: 117 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLW 171
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T+
Sbjct: 116 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLW 170
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T+
Sbjct: 117 QGLAFCHSHR----VLHRDLKPENLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLW 171
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T+
Sbjct: 117 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLW 171
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T+
Sbjct: 113 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLW 167
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T+
Sbjct: 113 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLW 167
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T+
Sbjct: 118 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLW 172
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T+
Sbjct: 115 QGLAFCHSHR----VLHRDLKPENLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLW 169
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T+
Sbjct: 114 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLW 168
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T+
Sbjct: 114 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLW 168
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T+
Sbjct: 115 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLW 169
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T+
Sbjct: 117 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLW 171
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T+
Sbjct: 115 QGLAFCHSHR----VLHRDLKPENLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLW 169
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T+
Sbjct: 114 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLW 168
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T+
Sbjct: 115 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLW 169
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T+
Sbjct: 117 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLW 171
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
RG+ ++H IIHRD+ SN+ +NED E+++ DFGL R
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T+
Sbjct: 114 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYXHEVVTLW 168
Query: 287 Y----ILLAC-----GGDIYSFSVVLLELVIRK 310
Y ILL C DI+S + E+V R+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 132
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLAC----- 292
+IHRDI N+LL E+K++DFG S T + GT+ Y+
Sbjct: 133 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEXIEGRX 187
Query: 293 ---GGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
RG+ ++H IIHRD+ SN+ +NED E+++ DFGL R
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-----NQAKHCIIACGTARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ ++ + A +++ H +
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK- 131
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI 288
+IHRDI N+LL + E+K++DFG S T + GT+ Y+
Sbjct: 132 --RVIHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRTTLCGTLDYL 177
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLI-SDCESHTSTDV 281
G F+H + IIHRD+ +N LLN+D VK+ DFGL R I SD + H D+
Sbjct: 143 GEKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDL 193
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 22/162 (13%)
Query: 162 GTNKFYEKNVIRGDDFGIAFKN--IVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKH 219
GT K + ++R N IV+L+G C E ++V E G L+ +L + +
Sbjct: 374 GTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREE 432
Query: 220 CIIAC------GTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDC 273
++ + G+ +L + + +HR++ A N+LL K+SDFGL + +
Sbjct: 433 IPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGAD 489
Query: 274 ESHTSTDVAGT----------IGYILLACGGDIYSFSVVLLE 305
+S+ + AG I + + D++S+ V + E
Sbjct: 490 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWE 531
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
RG+ ++H IIHRD+ SN+ +NED E+++ DFGL R
Sbjct: 134 RGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR 171
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 17/130 (13%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLAC-------- 292
II+RD+ NILL+E+ +K++DFGL + D E + GT+ Y+
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMAPEVVNRRGHTQ 205
Query: 293 GGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTI-LNAYSKPSMLKMLQIVV 351
D +SF V++ E++ P F+ K+ + +L + + + + P +L+++
Sbjct: 206 SADWWSFGVLMFEMLTGTLP----FQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLF 261
Query: 352 GCIFDNPTTR 361
NP R
Sbjct: 262 KR---NPANR 268
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%), Gaps = 3/39 (7%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGL 266
+GI +LH++ IIHRDI SN+L+ ED +K++DFG+
Sbjct: 148 KGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGV 183
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 235 HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD-------CESHTSTDVAGTIGY 287
HR + I+HRD+ N+LL+E VK++DFGL +++D C S G
Sbjct: 124 HRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK 181
Query: 288 ILLACGGDIYSFSVVLLELVIRKQPTGPE 316
+ D++S V+L ++ R+ P E
Sbjct: 182 LYAGPEVDVWSCGVILYVMLCRRLPFDDE 210
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 235 HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD-------CESHTSTDVAGTIGY 287
HR + I+HRD+ N+LL+E VK++DFGL +++D C S G
Sbjct: 120 HRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK 177
Query: 288 ILLACGGDIYSFSVVLLELVIRKQPTGPE 316
+ D++S V+L ++ R+ P E
Sbjct: 178 LYAGPEVDVWSCGVILYVMLCRRLPFDDE 206
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 130
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K+++FG S T + GT+ Y+ +
Sbjct: 131 --RVIHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 17/130 (13%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLAC-------- 292
II+RD+ NILL+E+ +K++DFGL + D E + GT+ Y+
Sbjct: 148 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK-KAYSFCGTVEYMAPEVVNRRGHTQ 206
Query: 293 GGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTI-LNAYSKPSMLKMLQIVV 351
D +SF V++ E++ P F+ K+ + +L + + + + P +L+++
Sbjct: 207 SADWWSFGVLMFEMLTGTLP----FQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLF 262
Query: 352 GCIFDNPTTR 361
NP R
Sbjct: 263 K---RNPANR 269
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 235 HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD-------CESHTSTDVAGTIGY 287
HR + I+HRD+ N+LL+E VK++DFGL +++D C S G
Sbjct: 129 HRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK 186
Query: 288 ILLACGGDIYSFSVVLLELVIRKQPTGPE 316
+ D++S V+L ++ R+ P E
Sbjct: 187 LYAGPEVDVWSCGVILYVMLCRRLPFDDE 215
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 235 HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD-------CESHTSTDVAGTIGY 287
HR + I+HRD+ N+LL+E VK++DFGL +++D C S G
Sbjct: 130 HRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK 187
Query: 288 ILLACGGDIYSFSVVLLELVIRKQPTGPE 316
+ D++S V+L ++ R+ P E
Sbjct: 188 LYAGPEVDVWSCGVILYVMLCRRLPFDDE 216
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 17/130 (13%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLAC-------- 292
II+RD+ NILL+E+ +K++DFGL + D E + GT+ Y+
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMAPEVVNRRGHTQ 205
Query: 293 GGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTI-LNAYSKPSMLKMLQIVV 351
D +SF V++ E++ P F+ K+ + +L + + + + P +L+++
Sbjct: 206 SADWWSFGVLMFEMLTGTLP----FQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLF 261
Query: 352 GCIFDNPTTR 361
NP R
Sbjct: 262 K---RNPANR 268
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T T+
Sbjct: 121 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLW 175
Query: 287 Y----ILL-----ACGGDIYSFSVVLLELVIRK 310
Y ILL + DI+S + E+V R+
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 130
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S + GT+ Y+ +
Sbjct: 131 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRM 185
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 18/108 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG---- 283
+G+ F H R +++HRD+ N+L+N + E+K++DFGL R S +V
Sbjct: 112 KGLGFCHSR---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYR 168
Query: 284 ----TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVD 327
G L + D++S + EL +P P GN VD
Sbjct: 169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFP-------GNDVD 209
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 127
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S + GT+ Y+ +
Sbjct: 128 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 71 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 129
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K+++FG S T + GT+ Y+ +
Sbjct: 130 --RVIHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 184
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 66/155 (42%), Gaps = 30/155 (19%)
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD--------- 272
IA + + LH + +IHRD+ SN+L+N +VK+ DFG+ + D
Sbjct: 114 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAG 171
Query: 273 CESHTSTD-VAGTIGYILLACGGDIYSFSVVLLELVIRKQPT---GPEFK---------- 318
C+ + + + + + + DI+S + ++EL I + P G F+
Sbjct: 172 CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS 231
Query: 319 -----DKNGGNLVDWVLDSTILNAYSKPSMLKMLQ 348
DK VD+ N+ +P+ +++Q
Sbjct: 232 PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Query: 228 RGITFLH-HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ F H HR ++HRD+ N+L+N + +K++DFGL R T T T+
Sbjct: 114 QGLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYTHEVVTLW 168
Query: 287 Y----ILL-----ACGGDIYSFSVVLLELVIRK 310
Y ILL + DI+S + E+V R+
Sbjct: 169 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 127
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S + GT+ Y+ +
Sbjct: 128 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRM 182
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 130
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S + GT+ Y+ +
Sbjct: 131 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRM 185
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 16/138 (11%)
Query: 183 NIVQLLGYCPVGEKKLIVYEY---MVKGSLNDWLRNQAKHCI--IACGTARGITFLHHRF 237
N+V LL + +V+EY V L+ + R +H + I T + + F H
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCH--- 119
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGT--------IGYIL 289
+ + IHRD+ NIL+ + +K+ DFG RL++ + +VA +G
Sbjct: 120 KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQ 179
Query: 290 LACGGDIYSFSVVLLELV 307
D+++ V EL+
Sbjct: 180 YGPPVDVWAIGCVFAELL 197
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ D GL R HT ++ G +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLAR-------HTDDEMTGYVA 184
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL--L 290
L H + II+RDI NILL+ + V ++DFGL + E+ + D GTI Y+ +
Sbjct: 172 LEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDI 231
Query: 291 ACGGDI--------YSFSVVLLELVIRKQP 312
GGD +S V++ EL+ P
Sbjct: 232 VRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 71 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 129
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S + GT+ Y+ +
Sbjct: 130 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRM 184
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ FGL R HT ++ G +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLAR-------HTDDEMTGYVA 184
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 69 NILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 127
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S + GT+ Y+ +
Sbjct: 128 --KVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGT- 284
T +G+ +LH + I+HRD+ +N+LL+E+ +K++DFGL + V
Sbjct: 121 TLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRW 177
Query: 285 -------IGYILLACGGDIYSFSVVLLELVIR 309
G + G D+++ +L EL++R
Sbjct: 178 YRAPELLFGARMYGVGVDMWAVGCILAELLLR 209
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 235 HRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD-------CESHTSTDVAGTIGY 287
HR + I+HRD+ N+LL+++ VK++DFGL +++D C S G
Sbjct: 125 HRHK--IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGK 182
Query: 288 ILLACGGDIYSFSVVLLELVIRKQPTGPEF 317
+ D++S +VL +++ + P EF
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 19/143 (13%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGT-----ARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ +K T A +++ H +
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK- 128
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI--------L 289
+IHRDI N+LL E+K++DFG S + GT+ Y+ +
Sbjct: 129 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDTLCGTLDYLPPEMIEGRM 183
Query: 290 LACGGDIYSFSVVLLELVIRKQP 312
D++S V+ E ++ K P
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 18/155 (11%)
Query: 215 NQAKHCIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCE 274
++A+ A + FLH + II+RD+ N+LL+ + K++DFG+ + C
Sbjct: 122 DEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKE-GICN 177
Query: 275 SHTSTDVAGTIGYI--------LLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLV 326
T+ GT YI L D ++ V+L E++ P F+ +N +L
Sbjct: 178 GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP----FEAENEDDLF 233
Query: 327 DWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTR 361
+ +L+ ++ Y I+ + NPT R
Sbjct: 234 EAILNDEVV--YPTWLHEDATGILKSFMTKNPTMR 266
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ D GL R HT ++ G +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLAR-------HTDDEMTGYVA 184
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ DF L R HT ++ G +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLAR-------HTDDEMTGYVA 184
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 15/142 (10%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLN-EDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
+G+ FLH R P IIHRD+ NI + VK+ D GL L + + V GT
Sbjct: 140 KGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR---ASFAKAVIGTPE 195
Query: 287 YILLAC-------GGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYS 339
+ D+Y+F LE + P + +N + V ++
Sbjct: 196 FXAPEXYEEKYDESVDVYAFGXCXLEXATSEYPYS---ECQNAAQIYRRVTSGVKPASFD 252
Query: 340 KPSMLKMLQIVVGCIFDNPTTR 361
K ++ ++ +I+ GCI N R
Sbjct: 253 KVAIPEVKEIIEGCIRQNKDER 274
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 21/160 (13%)
Query: 184 IVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQA-----KHCIIACGTARGITFLHHRFQ 238
IV L+ G K ++ EY+ G L L + C + + LH Q
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH---Q 139
Query: 239 PHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY----ILLACGG 294
II+RD+ NI+LN VK++DFGL + S + + GTI Y IL+ G
Sbjct: 140 KGIIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDGTVTHTFCGTIEYMAPEILMRSGH 198
Query: 295 ----DIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVL 330
D +S ++ +++ P F +N +D +L
Sbjct: 199 NRAVDWWSLGALMYDMLT----GAPPFTGENRKKTIDKIL 234
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 21/160 (13%)
Query: 184 IVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQA-----KHCIIACGTARGITFLHHRFQ 238
IV L+ G K ++ EY+ G L L + C + + LH Q
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH---Q 139
Query: 239 PHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY----ILLACGG 294
II+RD+ NI+LN VK++DFGL + S + + GTI Y IL+ G
Sbjct: 140 KGIIYRDLKPENIMLNHQGHVKLTDFGLCKE-SIHDGTVTHXFCGTIEYMAPEILMRSGH 198
Query: 295 ----DIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVL 330
D +S ++ +++ P F +N +D +L
Sbjct: 199 NRAVDWWSLGALMYDMLT----GAPPFTGENRKKTIDKIL 234
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-----NQAKHCIIACGTARGITFLHHRF 237
NI+QL +V++ M KG L D+L ++ + I I LH
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH--- 141
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI 288
+ +I+HRD+ NILL++D +K++DFG + E S V GT Y+
Sbjct: 142 KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS--VCGTPSYL 190
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
Query: 214 RNQAKHCII-ACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD 272
R + H + A A G+ FL + II+RD+ N++L+ + +K++DFG+ + +
Sbjct: 117 RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE-NI 172
Query: 273 CESHTSTDVAGTIGYIL--------LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGN 324
+ T+ GT YI D ++F V+L E++ + P F+ ++
Sbjct: 173 WDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP----FEGEDEDE 228
Query: 325 LVDWVLDSTILNAYSKPSMLKMLQIVVGCIFDNPTTR 361
L +++ + AY K + + I G + +P R
Sbjct: 229 LFQSIMEHNV--AYPKSMSKEAVAICKGLMTKHPGKR 263
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTI 285
G F+H + IIHRD+ +N LLN+D VKV DFGL R I+ S T++ +
Sbjct: 141 GENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTIN---SEKDTNIVNDL 191
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 10/59 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
RG+ ++H IIHRD+ SN+ +NED E+K+ D GL R HT ++ G +
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLAR-------HTDDEMTGYVA 184
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-----NQAKHCIIACGTARGITFLHHRF 237
NI+QL +V++ M KG L D+L ++ + I I LH
Sbjct: 72 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH--- 128
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI 288
+ +I+HRD+ NILL++D +K++DFG + E +V GT Y+
Sbjct: 129 KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYL 177
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
RG+ FLH I+HRD+ NIL+ VK++DFGL R+ S T V T+ Y
Sbjct: 131 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALTPVVVTLWY 185
Query: 288 ----ILL----ACGGDIYSFSVVLLELVIRK 310
+LL A D++S + E+ RK
Sbjct: 186 RAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI + H R ++HRD+ N+L+N + E+K++DFGL R
Sbjct: 112 GIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI + H R ++HRD+ N+L+N + E+K++DFGL R
Sbjct: 112 GIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI + H R ++HRD+ N+L+N + E+K++DFGL R
Sbjct: 112 GIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-----NQAKHCIIACGTARGITFLHHRF 237
NI+QL +V++ M KG L D+L ++ + I I LH
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH--- 141
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI 288
+ +I+HRD+ NILL++D +K++DFG + E +V GT Y+
Sbjct: 142 KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYL 190
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 3/44 (6%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
RG+ + H + ++HRD+ N+L+NE E+K++DFGL R S
Sbjct: 111 RGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKS 151
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR-----NQAKHCIIACGTARGITFLHHRF 237
NI++L GY + ++ EY G++ L+ ++ + A +++ H +
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK- 131
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI 288
+IHRDI N+LL + E+K++DFG S + GT+ Y+
Sbjct: 132 --RVIHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRDTLCGTLDYL 177
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 231 TFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD--------VA 282
T L + +HRDI A N+L++ + VK+ DFGL R + D + ++
Sbjct: 150 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 209
Query: 283 GTIGYILLACGGDIYSFSVVLLELVI 308
+I + D++ F V + E+++
Sbjct: 210 ESINFRRFTSASDVWMFGVCMWEILM 235
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 231 TFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD--------VA 282
T L + +HRDI A N+L++ + VK+ DFGL R + D + ++
Sbjct: 124 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 183
Query: 283 GTIGYILLACGGDIYSFSVVLLELVI 308
+I + D++ F V + E+++
Sbjct: 184 ESINFRRFTSASDVWMFGVCMWEILM 209
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 231 TFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD--------VA 282
T L + +HRDI A N+L++ + VK+ DFGL R + D + ++
Sbjct: 127 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 186
Query: 283 GTIGYILLACGGDIYSFSVVLLELVI 308
+I + D++ F V + E+++
Sbjct: 187 ESINFRRFTSASDVWMFGVCMWEILM 212
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 62/154 (40%), Gaps = 33/154 (21%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIA------------------- 223
N+V LLG + +++ Y G L+++L ++ H +
Sbjct: 90 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 149
Query: 224 --CGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHT---- 277
A G+ +L H++H+D+ N+L+ + VK+SD GL R + + +
Sbjct: 150 LVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 206
Query: 278 -----STDVAGTIGYILLACGGDIYSFSVVLLEL 306
I Y + DI+S+ VVL E+
Sbjct: 207 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 240
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 231 TFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD--------VA 282
T L + +HRDI A N+L++ + VK+ DFGL R + D + ++
Sbjct: 119 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 178
Query: 283 GTIGYILLACGGDIYSFSVVLLELVI 308
+I + D++ F V + E+++
Sbjct: 179 ESINFRRFTSASDVWMFGVCMWEILM 204
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLAC-------- 292
II+RD+ NILL+E+ +K++DFGL + D E + GT+ Y+
Sbjct: 151 IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS-FCGTVEYMAPEVVNRQGHSH 209
Query: 293 GGDIYSFSVVLLELVIRKQP 312
D +S+ V++ E++ P
Sbjct: 210 SADWWSYGVLMFEMLTGSLP 229
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 231 TFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD--------VA 282
T L + +HRDI A N+L++ + VK+ DFGL R + D + ++
Sbjct: 125 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 184
Query: 283 GTIGYILLACGGDIYSFSVVLLELVI 308
+I + D++ F V + E+++
Sbjct: 185 ESINFRRFTSASDVWMFGVCMWEILM 210
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 231 TFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD--------VA 282
T L + +HRDI A N+L++ + VK+ DFGL R + D + ++
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 283 GTIGYILLACGGDIYSFSVVLLELVI 308
+I + D++ F V + E+++
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 231 TFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD--------VA 282
T L + +HRDI A N+L++ + VK+ DFGL R + D + ++
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 283 GTIGYILLACGGDIYSFSVVLLELVI 308
+I + D++ F V + E+++
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 107/246 (43%), Gaps = 45/246 (18%)
Query: 151 LGKLTYDQIV----AGTNKFY-----EKNVIRGDD---FGIAFKNIVQLLGYCP------ 192
LGK ++ +++ GT++ Y +K+V+ DD + K ++ L G P
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 193 ----VGEKKLIVYEYMVKGSL----NDWLRNQAKHCII-ACGTARGITFLHHRFQPHIIH 243
++ V EY+ G L R + H + A A G+ FL + II+
Sbjct: 409 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIY 465
Query: 244 RDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGT--------IGYILLACGGD 295
RD+ N++L+ + +K++DFG+ + + + T+ GT I Y D
Sbjct: 466 RDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVD 524
Query: 296 IYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIF 355
++F V+L E++ + P F+ ++ L +++ + AY K + + I G +
Sbjct: 525 WWAFGVLLYEMLAGQAP----FEGEDEDELFQSIMEHNV--AYPKSMSKEAVAICKGLMT 578
Query: 356 DNPTTR 361
+P R
Sbjct: 579 KHPGKR 584
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 17/86 (19%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLV-RLISDCESHTSTDVAGTIG------------- 286
+IHRD+ SNILL+E ++K+ DFG+ RL+ D S A +
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPD 205
Query: 287 YILLACGGDIYSFSVVLLELVIRKQP 312
Y + A D++S + L+EL + P
Sbjct: 206 YDIRA---DVWSLGISLVELATGQFP 228
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 62/154 (40%), Gaps = 33/154 (21%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIA------------------- 223
N+V LLG + +++ Y G L+++L ++ H +
Sbjct: 73 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 224 --CGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHT---- 277
A G+ +L H++H+D+ N+L+ + VK+SD GL R + + +
Sbjct: 133 LVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 278 -----STDVAGTIGYILLACGGDIYSFSVVLLEL 306
I Y + DI+S+ VVL E+
Sbjct: 190 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEV 223
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 231 TFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD--------VA 282
T L + +HRDI A N+L++ + VK+ DFGL R + D + ++
Sbjct: 502 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 561
Query: 283 GTIGYILLACGGDIYSFSVVLLELVI 308
+I + D++ F V + E+++
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEILM 587
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 18/108 (16%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG---- 283
+G+ F H R +++HRD+ N+L+N + E+K+++FGL R S +V
Sbjct: 112 KGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYR 168
Query: 284 ----TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVD 327
G L + D++S + EL +P P GN VD
Sbjct: 169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP-------GNDVD 209
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 231 TFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD--------VA 282
T L + +HRDI A N+L++ + VK+ DFGL R + D ++
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAP 181
Query: 283 GTIGYILLACGGDIYSFSVVLLELVI 308
+I + D++ F V + E+++
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
+G+ ++H IIHRD+ N+ +NED E+K+ DFGL R
Sbjct: 139 KGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR 176
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 22/126 (17%)
Query: 198 LIVYEYMVKGSLNDWL---RNQAKHCIIAC----GTARGITFLHHRFQPHIIHRDINASN 250
I E+ KG+L W+ R + ++A +G+ ++H + +I+RD+ SN
Sbjct: 96 FIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSN 152
Query: 251 ILLNEDFEVKVSDFGLV-RLISDCESHTSTDVAGTIGYIL--------LACGGDIYSFSV 301
I L + +VK+ DFGLV L +D + S GT+ Y+ D+Y+ +
Sbjct: 153 IFLVDTKQVKIGDFGLVTSLKNDGKRXRS---KGTLRYMSPEQISSQDYGKEVDLYALGL 209
Query: 302 VLLELV 307
+L EL+
Sbjct: 210 ILAELL 215
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 11/81 (13%)
Query: 206 KGSLNDWL--------RNQAKHCIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDF 257
K +L DW+ R ++ I A + FLH + ++HRD+ SNI D
Sbjct: 99 KENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDD 155
Query: 258 EVKVSDFGLVRLISDCESHTS 278
VKV DFGLV + E +
Sbjct: 156 VVKVGDFGLVTAMDQDEEEQT 176
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Query: 206 KGSLNDWLRNQA-----KHCI---IACGTARGITFLHHRFQPHIIHRDINASNILLNEDF 257
K +L DW+ + +H + I A + FLH + ++HRD+ SNI D
Sbjct: 145 KENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDD 201
Query: 258 EVKVSDFGLVRLISDCESHTS 278
VKV DFGLV + E +
Sbjct: 202 VVKVGDFGLVTAMDQDEEEQT 222
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 231 TFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD--------VA 282
T L + +HRDI A N+L++ VK+ DFGL R + D + ++
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 283 GTIGYILLACGGDIYSFSVVLLELVI 308
+I + D++ F V + E+++
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
RG+ FLH I+HRD+ NIL+ VK++DFGL R+ S
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 30/155 (19%)
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD--------- 272
IA + + LH + +IHRD+ SN+L+N +VK DFG+ + D
Sbjct: 141 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAG 198
Query: 273 CESHTSTD-VAGTIGYILLACGGDIYSFSVVLLELVIRKQPT---GPEFK---------- 318
C+ + + + + + + DI+S + +EL I + P G F+
Sbjct: 199 CKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPS 258
Query: 319 -----DKNGGNLVDWVLDSTILNAYSKPSMLKMLQ 348
DK VD+ N+ +P+ ++ Q
Sbjct: 259 PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQ 293
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
RG+ FLH I+HRD+ NIL+ VK++DFGL R+ S
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
RG+ FLH I+HRD+ NIL+ VK++DFGL R+ S
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDW--LRNQAKHCIIA---CGTARGITFLHHR 236
+N+V LL C ++ +V+E++ L+D N + ++ GI F H
Sbjct: 84 ENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH 143
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+IIHRDI NIL+++ VK+ DFG R ++
Sbjct: 144 ---NIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTS 278
G+ ++H I+HRD+ +N L+N+D VKV DFGL R + E+ S
Sbjct: 168 GVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNS 214
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 50/205 (24%)
Query: 115 VGSVLAIAIIVSMLWWIQRGNRQQHLSINLAMFEPSLGKLTYDQIV--AGTNKFY----- 167
+GS+ I S L ++ + +++ IN +L + +++I+ NKFY
Sbjct: 3 LGSMKDILSNYSNLIYLNKYVKEKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKY 62
Query: 168 EKNVI-RGDDFGIA-------------FKNIVQLLG-----YCPVGE-------KKLIVY 201
EK+++ + DF + FKN +Q++ YC E + I+Y
Sbjct: 63 EKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIY 122
Query: 202 EYMVKGSL---NDWL----RN-------QAKHCIIACGTARGITFLHHRFQPHIIHRDIN 247
EYM S+ +++ +N Q CII +++H+ + +I HRD+
Sbjct: 123 EYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIK-SVLNSFSYIHN--EKNICHRDVK 179
Query: 248 ASNILLNEDFEVKVSDFGLVRLISD 272
SNIL++++ VK+SDFG + D
Sbjct: 180 PSNILMDKNGRVKLSDFGESEYMVD 204
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 89/226 (39%), Gaps = 50/226 (22%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHCI-----IACGTARGITFLHHRF-----QPHIIHRDINA 248
+V +Y GSL D+L N+ + +A TA G+ LH +P I HRD+ +
Sbjct: 117 LVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 175
Query: 249 SNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA-----GTIGYILLAC----------- 292
NIL+ ++ ++D GL + + + D+A GT Y+
Sbjct: 176 KNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 233
Query: 293 ---GGDIYSFSVVLLELVIRKQ----------------PTGPEFKDKNGGNLVDWVLDST 333
DIY+ +V E+ R P+ P ++ + + L
Sbjct: 234 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMR-KVVCEQKLRPN 292
Query: 334 ILNAYSKPSMLK-MLQIVVGCIFDNPTTRPTMLRVQEFLEKYHTGE 378
I N + L+ M +I+ C + N R T LR+++ L + E
Sbjct: 293 IPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
RG+ H Q I+HRD+ N+L+N D +K++DFGL R
Sbjct: 130 RGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLN-EDFEVKVSDFGLVRLISDCESH 276
RG+ ++H +++HRD+ +N+ +N ED +K+ DFGL R++ SH
Sbjct: 131 RGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH 177
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
RG+ H Q I+HRD+ N+L+N D +K++DFGL R
Sbjct: 130 RGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 10/58 (17%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTI 285
+G+ ++H ++HRD+ N+ +NED E+K+ DFGL R H ++ G +
Sbjct: 155 KGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYV 202
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 231 TFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD--------VA 282
T L + +HRDI A N+L++ VK+ DFGL R + D + ++
Sbjct: 502 TALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 561
Query: 283 GTIGYILLACGGDIYSFSVVLLELVI 308
+I + D++ F V + E+++
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEILM 587
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 20/152 (13%)
Query: 179 IAFKN---IVQLLGYCPVGEKKLI--VYEYMVKGSLNDWLRN-QAKHCIIACGTARGITF 232
+AF N +VQL +C + K + V EYM G L + + N TA +
Sbjct: 129 MAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLA 186
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI---- 288
L +IHRD+ N+LL++ +K++DFG + + GT YI
Sbjct: 187 LDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEV 246
Query: 289 LLACGGDIY--------SFSVVLLELVIRKQP 312
L + GGD Y S V L E+++ P
Sbjct: 247 LKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 89/226 (39%), Gaps = 50/226 (22%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHCI-----IACGTARGITFLHHRF-----QPHIIHRDINA 248
+V +Y GSL D+L N+ + +A TA G+ LH +P I HRD+ +
Sbjct: 104 LVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 162
Query: 249 SNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA-----GTIGYILLAC----------- 292
NIL+ ++ ++D GL + + + D+A GT Y+
Sbjct: 163 KNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 220
Query: 293 ---GGDIYSFSVVLLELVIRKQ----------------PTGPEFKDKNGGNLVDWVLDST 333
DIY+ +V E+ R P+ P ++ + + L
Sbjct: 221 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMR-KVVCEQKLRPN 279
Query: 334 ILNAYSKPSMLK-MLQIVVGCIFDNPTTRPTMLRVQEFLEKYHTGE 378
I N + L+ M +I+ C + N R T LR+++ L + E
Sbjct: 280 IPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 325
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 10/58 (17%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTI 285
+G+ ++H ++HRD+ N+ +NED E+K+ DFGL R H ++ G +
Sbjct: 137 KGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYV 184
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 89/226 (39%), Gaps = 50/226 (22%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHCI-----IACGTARGITFLHHRF-----QPHIIHRDINA 248
+V +Y GSL D+L N+ + +A TA G+ LH +P I HRD+ +
Sbjct: 78 LVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 136
Query: 249 SNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA-----GTIGYILLAC----------- 292
NIL+ ++ ++D GL + + + D+A GT Y+
Sbjct: 137 KNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 194
Query: 293 ---GGDIYSFSVVLLELVIRKQ----------------PTGPEFKDKNGGNLVDWVLDST 333
DIY+ +V E+ R P+ P ++ + + L
Sbjct: 195 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMR-KVVCEQKLRPN 253
Query: 334 ILNAYSKPSMLK-MLQIVVGCIFDNPTTRPTMLRVQEFLEKYHTGE 378
I N + L+ M +I+ C + N R T LR+++ L + E
Sbjct: 254 IPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 89/226 (39%), Gaps = 50/226 (22%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHCI-----IACGTARGITFLHHRF-----QPHIIHRDINA 248
+V +Y GSL D+L N+ + +A TA G+ LH +P I HRD+ +
Sbjct: 84 LVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 142
Query: 249 SNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA-----GTIGYILLAC----------- 292
NIL+ ++ ++D GL + + + D+A GT Y+
Sbjct: 143 KNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 200
Query: 293 ---GGDIYSFSVVLLELVIRKQ----------------PTGPEFKDKNGGNLVDWVLDST 333
DIY+ +V E+ R P+ P ++ + + L
Sbjct: 201 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMR-KVVCEQKLRPN 259
Query: 334 ILNAYSKPSMLK-MLQIVVGCIFDNPTTRPTMLRVQEFLEKYHTGE 378
I N + L+ M +I+ C + N R T LR+++ L + E
Sbjct: 260 IPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 305
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 70/170 (41%), Gaps = 32/170 (18%)
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLAC 292
L H I+HRDI + NI L +D V++ DFG+ R+++ + GT Y+
Sbjct: 138 LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-VELARACIGTPYYLSPEI 196
Query: 293 --------GGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTILNAYSKPSML 344
DI++ VL EL K G++ + VL I++ P L
Sbjct: 197 CENKPYNNKSDIWALGCVLYELCTLKHAF-------EAGSMKNLVL--KIISGSFPPVSL 247
Query: 345 KM---LQIVVGCIFD-NPTTRPTM----------LRVQEFLEKYHTGENF 380
L+ +V +F NP RP++ R+++FL E F
Sbjct: 248 HYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAEEF 297
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 89/226 (39%), Gaps = 50/226 (22%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHCI-----IACGTARGITFLHHRF-----QPHIIHRDINA 248
+V +Y GSL D+L N+ + +A TA G+ LH +P I HRD+ +
Sbjct: 81 LVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 139
Query: 249 SNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA-----GTIGYILLAC----------- 292
NIL+ ++ ++D GL + + + D+A GT Y+
Sbjct: 140 KNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 197
Query: 293 ---GGDIYSFSVVLLELVIRKQ----------------PTGPEFKDKNGGNLVDWVLDST 333
DIY+ +V E+ R P+ P ++ + + L
Sbjct: 198 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMR-KVVCEQKLRPN 256
Query: 334 ILNAYSKPSMLK-MLQIVVGCIFDNPTTRPTMLRVQEFLEKYHTGE 378
I N + L+ M +I+ C + N R T LR+++ L + E
Sbjct: 257 IPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 302
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 89/226 (39%), Gaps = 50/226 (22%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHCI-----IACGTARGITFLHHRF-----QPHIIHRDINA 248
+V +Y GSL D+L N+ + +A TA G+ LH +P I HRD+ +
Sbjct: 79 LVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKS 137
Query: 249 SNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA-----GTIGYILLAC----------- 292
NIL+ ++ ++D GL + + + D+A GT Y+
Sbjct: 138 KNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 195
Query: 293 ---GGDIYSFSVVLLELVIRKQ----------------PTGPEFKDKNGGNLVDWVLDST 333
DIY+ +V E+ R P+ P ++ + + L
Sbjct: 196 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMR-KVVCEQKLRPN 254
Query: 334 ILNAYSKPSMLK-MLQIVVGCIFDNPTTRPTMLRVQEFLEKYHTGE 378
I N + L+ M +I+ C + N R T LR+++ L + E
Sbjct: 255 IPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 300
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 13/155 (8%)
Query: 231 TFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL- 289
+ L H ++HRDI +N+ + VK+ D GL R S ++ + + GT Y+
Sbjct: 147 SALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS-KTTAAHSLVGTPYYMSP 205
Query: 290 -------LACGGDIYSFSVVLLELVIRKQPTGPEFKDK-NGGNLVDWVLDSTILNAYSKP 341
DI+S +L E+ + P + DK N +L + S
Sbjct: 206 ERIHENGYNFKSDIWSLGCLLYEMAALQSPF---YGDKMNLYSLCKKIEQCDYPPLPSDH 262
Query: 342 SMLKMLQIVVGCIFDNPTTRPTMLRVQEFLEKYHT 376
++ Q+V CI +P RP + V + ++ H
Sbjct: 263 YSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 12/107 (11%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAG---- 283
+G+ F H I+HRD+ N+L+N+ ++K+ DFGL R + S++V
Sbjct: 119 QGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYR 175
Query: 284 ----TIGYILLACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLV 326
+G + DI+S +L E++ K P P D+ L+
Sbjct: 176 APDVLMGSRTYSTSIDIWSCGCILAEMITGK-PLFPGTNDEEQLKLI 221
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
G+ ++H I+HRD+ A+N+L+ D +K++DFGL R S
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 176
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
G+ ++H I+HRD+ A+N+L+ D +K++DFGL R S
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 176
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
G+ ++H I+HRD+ A+N+L+ D +K++DFGL R S
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 176
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
G+ ++H I+HRD+ A+N+L+ D +K++DFGL R S
Sbjct: 136 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 175
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 242 IHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDV--------AGTIGYILLACG 293
+HRDI NIL+ VK+ DFGL R I D + + ++ +I +
Sbjct: 135 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 194
Query: 294 GDIYSFSVVLLE-LVIRKQP 312
D++ F+V + E L KQP
Sbjct: 195 SDVWMFAVCMWEILSFGKQP 214
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 242 IHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDV--------AGTIGYILLACG 293
+HRDI NIL+ VK+ DFGL R I D + + ++ +I +
Sbjct: 147 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 206
Query: 294 GDIYSFSVVLLE-LVIRKQP 312
D++ F+V + E L KQP
Sbjct: 207 SDVWMFAVCMWEILSFGKQP 226
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 242 IHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDV--------AGTIGYILLACG 293
+HRDI NIL+ VK+ DFGL R I D + + ++ +I +
Sbjct: 131 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 190
Query: 294 GDIYSFSVVLLE-LVIRKQP 312
D++ F+V + E L KQP
Sbjct: 191 SDVWMFAVCMWEILSFGKQP 210
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 13/87 (14%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY- 287
GI LH IIHRD+ SNI++ D +K+ DFGL R + C + T T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TACTNFMMTPYVVTRYYR 192
Query: 288 ---ILL----ACGGDIYSFSVVLLELV 307
++L A DI+S ++ ELV
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELV 219
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 17/116 (14%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTAR-------GITFLHH 235
NI++L + +V E+ G L + + N +H C A GI +LH
Sbjct: 107 NIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLH- 163
Query: 236 RFQPHIIHRDINASNILL---NEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI 288
+ +I+HRDI NILL N +K+ DFGL S + + D GT YI
Sbjct: 164 --KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS--KDYKLRDRLGTAYYI 215
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 18/104 (17%)
Query: 222 IACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISD--------- 272
I T + + L + IIHRDI SNILL+ +K+ DFG+ + D
Sbjct: 130 ITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAG 187
Query: 273 CESHTSTD----VAGTIGYILLACGGDIYSFSVVLLELVIRKQP 312
C + + + A GY + + D++S + L EL + P
Sbjct: 188 CRPYMAPERIDPSASRQGYDVRS---DVWSLGITLYELATGRFP 228
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 216 QAKHCIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCES 275
+A+ A G+ LH I++RD+ NILL++ +++SD GL + E
Sbjct: 285 EARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP--EG 339
Query: 276 HTSTDVAGTIGYIL--------LACGGDIYSFSVVLLELVIRKQP 312
T GT+GY+ D ++ +L E++ + P
Sbjct: 340 QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 216 QAKHCIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCES 275
+A+ A G+ LH I++RD+ NILL++ +++SD GL + E
Sbjct: 285 EARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP--EG 339
Query: 276 HTSTDVAGTIGYIL--------LACGGDIYSFSVVLLELVIRKQP 312
T GT+GY+ D ++ +L E++ + P
Sbjct: 340 QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 38/161 (23%)
Query: 179 IAFKN---IVQLLGYCPVGEKKL-IVYEYMVKGSL----------NDWLRNQAKHCIIAC 224
+AF N +VQL Y ++ L +V EYM G L W R ++A
Sbjct: 128 MAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLAL 186
Query: 225 GTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA-G 283
+ F IHRD+ N+LL++ +K++DFG + + E D A G
Sbjct: 187 DAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVG 236
Query: 284 TIGYI----LLACGGDIY--------SFSVVLLELVIRKQP 312
T YI L + GGD Y S V L E+++ P
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 38/161 (23%)
Query: 179 IAFKN---IVQLLGYCPVGEKKL-IVYEYMVKGSL----------NDWLRNQAKHCIIAC 224
+AF N +VQL Y ++ L +V EYM G L W R ++A
Sbjct: 123 MAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLAL 181
Query: 225 GTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA-G 283
+ F IHRD+ N+LL++ +K++DFG + + E D A G
Sbjct: 182 DAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVG 231
Query: 284 TIGYI----LLACGGDIY--------SFSVVLLELVIRKQP 312
T YI L + GGD Y S V L E+++ P
Sbjct: 232 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVR 268
++HRD+ SNILLN + VKV+DFGL R
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 38/161 (23%)
Query: 179 IAFKN---IVQLLGYCPVGEKKL-IVYEYMVKGSL----------NDWLRNQAKHCIIAC 224
+AF N +VQL Y ++ L +V EYM G L W R ++A
Sbjct: 128 MAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLAL 186
Query: 225 GTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVA-G 283
+ F IHRD+ N+LL++ +K++DFG + + E D A G
Sbjct: 187 DAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVG 236
Query: 284 TIGYI----LLACGGDIY--------SFSVVLLELVIRKQP 312
T YI L + GGD Y S V L E+++ P
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 170 NVIRGDDFGIAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTARG 229
N++R ++ K I +L + P GE +Y+ + K D R+ A
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGE----LYKELQKHGRFDEQRS----ATFMEELADA 126
Query: 230 ITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFG 265
+ + H R +IHRDI N+L+ E+K++DFG
Sbjct: 127 LHYCHER---KVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 11/121 (9%)
Query: 188 LGYCPVGEKKLI-VYEYMVKGSLNDWLRNQAK----HC-IIACGTARGITFLHHRFQPHI 241
L C E +L V EY+ G L ++ Q K H + + + +LH R I
Sbjct: 118 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GI 174
Query: 242 IHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLAC-GGDIYSFS 300
I+RD+ N+LL+ + +K++D+G+ + TST GT YI G+ Y FS
Sbjct: 175 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST-FCGTPNYIAPEILRGEDYGFS 233
Query: 301 V 301
V
Sbjct: 234 V 234
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 170 NVIRGDDFGIAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTARG 229
N++R ++ K I +L + P GE +Y+ + K D R+ A
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGE----LYKELQKHGRFDEQRS----ATFMEELADA 126
Query: 230 ITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFG 265
+ + H R +IHRDI N+L+ E+K++DFG
Sbjct: 127 LHYCHER---KVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 170 NVIRGDDFGIAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTARG 229
N++R ++ K I +L + P GE +Y+ + K D R+ A
Sbjct: 76 NILRMYNYFHDRKRIYLMLEFAPRGE----LYKELQKHGRFDEQRS----ATFMEELADA 127
Query: 230 ITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFG 265
+ + H R +IHRDI N+L+ E+K++DFG
Sbjct: 128 LHYCHER---KVIHRDIKPENLLMGYKGELKIADFG 160
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 88/204 (43%), Gaps = 36/204 (17%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFLHH 235
NIV+L G + +V E++ G L L ++A H I + A GI ++ +
Sbjct: 84 NIVKLYGL--MHNPPRMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQN 140
Query: 236 RFQPHIIHRDINASNILL-----NEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILL 290
+ P I+HRD+ + NI L N KV+DFGL S H+ + + G ++
Sbjct: 141 Q-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL----SQQSVHSVSGLLGNFQWMAP 195
Query: 291 ACGG----------DIYSFSVVLLELVIRKQPTGPEFKDKNGGNL--VDWVLDSTILNAY 338
G D YSF+++L ++ + P F + + G + ++ + + +
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGP----FDEYSYGKIKFINMIREEGLRPTI 251
Query: 339 SKPSMLKMLQIVVGCIFDNPTTRP 362
+ ++ ++ C +P RP
Sbjct: 252 PEDCPPRLRNVIELCWSGDPKKRP 275
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 20/162 (12%)
Query: 221 IIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTD 280
+ C + +L ++ IIHRD+ NILL+E V ++DF + ++ E+ +T
Sbjct: 119 LFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR-ETQITT- 173
Query: 281 VAGTIGYIL-----------LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWV 329
+AGT Y+ + D +S V EL+ ++P + +
Sbjct: 174 MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY--HIRSSTSSKEIVHT 231
Query: 330 LDSTILNAYSKPSMLKMLQIVVGCIFDNPTTRPTMLR-VQEF 370
++T++ Y +M+ ++ + NP R + L VQ F
Sbjct: 232 FETTVV-TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF 272
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
GI LH IIHRD+ SNI++ D +K+ DFGL R S
Sbjct: 136 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS 175
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 13/87 (14%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY- 287
GI LH IIHRD+ SNI++ D +K+ DFGL R + S T T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 288 ---ILLACGG----DIYSFSVVLLELV 307
++L G DI+S V++ E++
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 13/87 (14%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY- 287
GI LH IIHRD+ SNI++ D +K+ DFGL R + S T T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 288 ---ILLACGG----DIYSFSVVLLELV 307
++L G DI+S V++ E++
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 131 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 167
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 17/103 (16%)
Query: 241 IIHRDINASNIL---LNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL-------- 289
I+HRD+ N+L L+ED ++ +SDFGL ++ D S ST GT GY+
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLST-ACGTPGYVAPEVLAQKP 194
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDS 332
+ D +S V+ L+ P F D+N L + +L +
Sbjct: 195 YSKAVDCWSIGVIAYILLC----GYPPFYDENDAKLFEQILKA 233
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 176 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 17/103 (16%)
Query: 241 IIHRDINASNIL---LNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL-------- 289
I+HRD+ N+L L+ED ++ +SDFGL ++ D S ST GT GY+
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLST-ACGTPGYVAPEVLAQKP 194
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDS 332
+ D +S V+ L+ P F D+N L + +L +
Sbjct: 195 YSKAVDCWSIGVIAYILLC----GYPPFYDENDAKLFEQILKA 233
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 140 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 176
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 11/121 (9%)
Query: 188 LGYCPVGEKKLI-VYEYMVKGSLNDWLRNQAK----HC-IIACGTARGITFLHHRFQPHI 241
L C E +L V EY+ G L ++ Q K H + + + +LH R I
Sbjct: 75 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GI 131
Query: 242 IHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLAC-GGDIYSFS 300
I+RD+ N+LL+ + +K++D+G+ + T++ GT YI G+ Y FS
Sbjct: 132 IYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIAPEILRGEDYGFS 190
Query: 301 V 301
V
Sbjct: 191 V 191
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 143 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 179
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 176 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 17/103 (16%)
Query: 241 IIHRDINASNIL---LNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL-------- 289
I+HRD+ N+L L+ED ++ +SDFGL ++ D S ST GT GY+
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLST-ACGTPGYVAPEVLAQKP 194
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDS 332
+ D +S V+ L+ P F D+N L + +L +
Sbjct: 195 YSKAVDCWSIGVIAYILLC----GYPPFYDENDAKLFEQILKA 233
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 131 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 139 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 11/121 (9%)
Query: 188 LGYCPVGEKKLI-VYEYMVKGSLNDWLRNQAK----HC-IIACGTARGITFLHHRFQPHI 241
L C E +L V EY+ G L ++ Q K H + + + +LH R I
Sbjct: 71 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GI 127
Query: 242 IHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLAC-GGDIYSFS 300
I+RD+ N+LL+ + +K++D+G+ + T++ GT YI G+ Y FS
Sbjct: 128 IYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIAPEILRGEDYGFS 186
Query: 301 V 301
V
Sbjct: 187 V 187
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 137 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 173
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 17/103 (16%)
Query: 241 IIHRDINASNIL---LNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL-------- 289
I+HRD+ N+L L+ED ++ +SDFGL ++ D S ST GT GY+
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLST-ACGTPGYVAPEVLAQKP 194
Query: 290 LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDS 332
+ D +S V+ L+ P F D+N L + +L +
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPP----FYDENDAKLFEQILKA 233
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI 288
Q H +HRDI N+LL+ + ++++DFG ++D + S+ GT YI
Sbjct: 209 QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYI 259
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 18/104 (17%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI------------IACGTARG 229
+NIV+ +G + I+ E M G L +LR +A A G
Sbjct: 108 QNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 230 ITFLHHRFQPHIIHRDINASNILLN---EDFEVKVSDFGLVRLI 270
+L H IHRDI A N LL K+ DFG+ R I
Sbjct: 168 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 208
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
GI LH IIHRD+ SNI++ D +K+ DFGL R
Sbjct: 132 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 18/104 (17%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI------------IACGTARG 229
+NIV+ +G + I+ E M G L +LR +A A G
Sbjct: 111 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 170
Query: 230 ITFLHHRFQPHIIHRDINASNILLN---EDFEVKVSDFGLVRLI 270
+L H IHRDI A N LL K+ DFG+ R I
Sbjct: 171 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 211
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 18/104 (17%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI------------IACGTARG 229
+NIV+ +G + I+ E M G L +LR +A A G
Sbjct: 134 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 193
Query: 230 ITFLHHRFQPHIIHRDINASNILLN---EDFEVKVSDFGLVRLI 270
+L H IHRDI A N LL K+ DFG+ R I
Sbjct: 194 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 234
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI 288
Q H +HRDI N+LL+ + ++++DFG ++D + S+ GT YI
Sbjct: 193 QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYI 243
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 18/104 (17%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI------------IACGTARG 229
+NIV+ +G + I+ E M G L +LR +A A G
Sbjct: 93 QNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 230 ITFLHHRFQPHIIHRDINASNILLN---EDFEVKVSDFGLVRLI 270
+L H IHRDI A N LL K+ DFG+ R I
Sbjct: 153 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 193
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 18/104 (17%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI------------IACGTARG 229
+NIV+ +G + I+ E M G L +LR +A A G
Sbjct: 110 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 169
Query: 230 ITFLHHRFQPHIIHRDINASNILLN---EDFEVKVSDFGLVRLI 270
+L H IHRDI A N LL K+ DFG+ R I
Sbjct: 170 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 210
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 18/104 (17%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI------------IACGTARG 229
+NIV+ +G + I+ E M G L +LR +A A G
Sbjct: 85 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 144
Query: 230 ITFLHHRFQPHIIHRDINASNILLN---EDFEVKVSDFGLVRLI 270
+L H IHRDI A N LL K+ DFG+ R I
Sbjct: 145 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 185
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 15/89 (16%)
Query: 238 QPHIIHRDINASNILLNEDFEVKVSDFG-LVRLISDCESHTSTDVAGTIGY----ILLAC 292
Q H +HRDI NIL++ + ++++DFG ++L+ D +S V GT Y IL A
Sbjct: 193 QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV-GTPDYISPEILQAM 251
Query: 293 GG---------DIYSFSVVLLELVIRKQP 312
G D +S V + E++ + P
Sbjct: 252 EGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 81/216 (37%), Gaps = 33/216 (15%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI------------IACGTARG 229
+NIV+ +G + I+ E M G L +LR +A A G
Sbjct: 108 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 230 ITFLHHRFQPHIIHRDINASNILLN---EDFEVKVSDFGLVRLISDCESHTSTDVAG-TI 285
+L H IHRDI A N LL K+ DFG+ R I + A +
Sbjct: 168 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 286 GYI--------LLACGGDIYSFSVVLLELV-IRKQPTGPEFKDKNGGNLVDWVLDSTILN 336
++ + D +SF V+L E+ + P + K+ ++++V ++
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP----YPSKSNQEVLEFVTSGGRMD 280
Query: 337 AYSKPSMLKMLQIVVGCIFDNPTTRPTMLRVQEFLE 372
K + +I+ C P RP + E +E
Sbjct: 281 P-PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 18/104 (17%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI------------IACGTARG 229
+NIV+ +G + I+ E M G L +LR +A A G
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 230 ITFLHHRFQPHIIHRDINASNILLN---EDFEVKVSDFGLVRLI 270
+L H IHRDI A N LL K+ DFG+ R I
Sbjct: 154 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 194
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 18/104 (17%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI------------IACGTARG 229
+NIV+ +G + I+ E M G L +LR +A A G
Sbjct: 108 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 230 ITFLHHRFQPHIIHRDINASNILLN---EDFEVKVSDFGLVRLI 270
+L H IHRDI A N LL K+ DFG+ R I
Sbjct: 168 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 208
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 11/121 (9%)
Query: 188 LGYCPVGEKKLI-VYEYMVKGSLNDWLRNQAK----HC-IIACGTARGITFLHHRFQPHI 241
L C E +L V EY+ G L ++ Q K H + + + +LH R I
Sbjct: 86 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GI 142
Query: 242 IHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLAC-GGDIYSFS 300
I+RD+ N+LL+ + +K++D+G+ + T++ GT YI G+ Y FS
Sbjct: 143 IYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIAPEILRGEDYGFS 201
Query: 301 V 301
V
Sbjct: 202 V 202
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 18/104 (17%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI------------IACGTARG 229
+NIV+ +G + I+ E M G L +LR +A A G
Sbjct: 100 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 159
Query: 230 ITFLHHRFQPHIIHRDINASNILLN---EDFEVKVSDFGLVRLI 270
+L H IHRDI A N LL K+ DFG+ R I
Sbjct: 160 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 200
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 15/104 (14%)
Query: 221 IIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGL----VRLISDCESH 276
++ T + +LH IIHRD+ A NIL D ++K++DFG+ R I +S
Sbjct: 139 VVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSF 195
Query: 277 TSTDVAGTIGYILLACG--------GDIYSFSVVLLELVIRKQP 312
T ++ D++S + L+E+ + P
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 18/104 (17%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI------------IACGTARG 229
+NIV+ +G + I+ E M G L +LR +A A G
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 230 ITFLHHRFQPHIIHRDINASNILLN---EDFEVKVSDFGLVRLI 270
+L H IHRDI A N LL K+ DFG+ R I
Sbjct: 154 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 194
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 18/104 (17%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI------------IACGTARG 229
+NIV+ +G + I+ E M G L +LR +A A G
Sbjct: 93 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 230 ITFLHHRFQPHIIHRDINASNILLN---EDFEVKVSDFGLVRLI 270
+L H IHRDI A N LL K+ DFG+ R I
Sbjct: 153 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 193
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 15/104 (14%)
Query: 221 IIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGL----VRLISDCESH 276
++ T + +LH IIHRD+ A NIL D ++K++DFG+ R I +S
Sbjct: 139 VVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF 195
Query: 277 TSTDVAGTIGYILLACG--------GDIYSFSVVLLELVIRKQP 312
T ++ D++S + L+E+ + P
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 18/104 (17%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI------------IACGTARG 229
+NIV+ +G + I+ E M G L +LR +A A G
Sbjct: 120 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 179
Query: 230 ITFLHHRFQPHIIHRDINASNILLN---EDFEVKVSDFGLVRLI 270
+L H IHRDI A N LL K+ DFG+ R I
Sbjct: 180 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 220
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 12/131 (9%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLR----NQAK--HCIIACGTARGITFLHH 235
+N V+ + I EY G+L D + NQ + + + ++++H
Sbjct: 75 RNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHS 134
Query: 236 RFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLIS---DCESHTSTDVAGTIGYILLAC 292
+ IIHRD+ NI ++E VK+ DFGL + + D S ++ G+ + A
Sbjct: 135 Q---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI 191
Query: 293 GGDIYSFSVVL 303
G +Y + VL
Sbjct: 192 GTAMYVATEVL 202
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS---DCESHTSTDVAGTIGYILLACGGDIY 297
IIHRD+ NI ++E VK+ DFGL + + D S ++ G+ + A G +Y
Sbjct: 137 IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMY 196
Query: 298 SFSVVL 303
+ VL
Sbjct: 197 VATEVL 202
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 28/152 (18%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDF---EVKVSDFGLVRLISD-CESHTSTDVAG 283
G+ +LH Q +I+H D+ NILL+ + ++K+ DFG+ R I CE ++ G
Sbjct: 142 EGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR---EIMG 195
Query: 284 TIGYIL--------LACGGDIYSFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTIL 335
T Y+ + D+++ ++ L+ P E + N+ +D
Sbjct: 196 TPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVD---- 251
Query: 336 NAYSKPSMLKMLQIVVGCI----FDNPTTRPT 363
YS+ + + Q+ I NP RPT
Sbjct: 252 --YSEETFSSVSQLATDFIQSLLVKNPEKRPT 281
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 12/65 (18%)
Query: 229 GITFLHHRFQPHIIHRDINASNILL---NEDFEVKVSDFGLVRLISDC--ESHTSTDVAG 283
GIT++H + +I+HRD+ NILL +D ++K+ DFGL S C ++ D G
Sbjct: 133 GITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGL----STCFQQNTKMKDRIG 185
Query: 284 TIGYI 288
T YI
Sbjct: 186 TAYYI 190
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFG 265
IIHRDI NI++ EDF +K+ DFG
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDFG 175
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 12/65 (18%)
Query: 229 GITFLHHRFQPHIIHRDINASNILL---NEDFEVKVSDFGLVRLISDC--ESHTSTDVAG 283
GIT++H + +I+HRD+ NILL +D ++K+ DFGL S C ++ D G
Sbjct: 133 GITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGL----STCFQQNTKMKDRIG 185
Query: 284 TIGYI 288
T YI
Sbjct: 186 TAYYI 190
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 12/65 (18%)
Query: 229 GITFLHHRFQPHIIHRDINASNILL---NEDFEVKVSDFGLVRLISDC--ESHTSTDVAG 283
GIT++H + +I+HRD+ NILL +D ++K+ DFGL S C ++ D G
Sbjct: 133 GITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGL----STCFQQNTKMKDRIG 185
Query: 284 TIGYI 288
T YI
Sbjct: 186 TAYYI 190
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRL-ISDCESHTSTDVAGTIGY 287
+ +LH R +++RDI N++L++D +K++DFGL + ISD T GT Y
Sbjct: 122 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGTPEY 176
Query: 288 IL--------LACGGDIYSFSVVLLELVIRKQP 312
+ D + VV+ E++ + P
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 36/204 (17%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFLHH 235
NIV+L G + +V E++ G L L ++A H I + A GI ++ +
Sbjct: 84 NIVKLYGL--MHNPPRMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQN 140
Query: 236 RFQPHIIHRDINASNILL-----NEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILL 290
+ P I+HRD+ + NI L N KV+DFG S H+ + + G ++
Sbjct: 141 Q-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG----TSQQSVHSVSGLLGNFQWMAP 195
Query: 291 ACGG----------DIYSFSVVLLELVIRKQPTGPEFKDKNGGNL--VDWVLDSTILNAY 338
G D YSF+++L ++ + P F + + G + ++ + + +
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGP----FDEYSYGKIKFINMIREEGLRPTI 251
Query: 339 SKPSMLKMLQIVVGCIFDNPTTRP 362
+ ++ ++ C +P RP
Sbjct: 252 PEDCPPRLRNVIELCWSGDPKKRP 275
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRL-ISDCESHTSTDVAGTIGY 287
+ +LH R +++RDI N++L++D +K++DFGL + ISD T GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGTPEY 171
Query: 288 IL--------LACGGDIYSFSVVLLELVIRKQP 312
+ D + VV+ E++ + P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRL-ISDCESHTSTDVAGTIGY 287
+ +LH R +++RDI N++L++D +K++DFGL + ISD T GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGTPEY 171
Query: 288 IL--------LACGGDIYSFSVVLLELVIRKQP 312
+ D + VV+ E++ + P
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRL-ISDCESHTSTDVAGTIGY 287
+ +LH R +++RDI N++L++D +K++DFGL + ISD T GT Y
Sbjct: 120 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGTPEY 174
Query: 288 I 288
+
Sbjct: 175 L 175
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 221 IIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGL 266
++ T + +LH IIHRD+ A NIL D ++K++DFG+
Sbjct: 139 VVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGV 181
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRL-ISDCESHTSTDVAGTIGY 287
+ +LH R +++RDI N++L++D +K++DFGL + ISD T GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGTPEY 171
Query: 288 I 288
+
Sbjct: 172 L 172
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 19/87 (21%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNED---FEVKVSDFGLVRLISDCESHTSTDVAGTI 285
+ + H + H++H+D+ NIL + +K+ DFGL L E ST+ AGT
Sbjct: 136 ALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH--STNAAGTA 190
Query: 286 GY---------ILLACGGDIYSFSVVL 303
Y + C DI+S VV+
Sbjct: 191 LYMAPEVFKRDVTFKC--DIWSAGVVM 215
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRL-ISDCESHTSTDVAGTIGY 287
+ +LH R +++RDI N++L++D +K++DFGL + ISD T GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGTPEY 171
Query: 288 I 288
+
Sbjct: 172 L 172
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRL-ISDCESHTSTDVAGTIGY 287
+ +LH R +++RDI N++L++D +K++DFGL + ISD T GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGTPEY 171
Query: 288 I 288
+
Sbjct: 172 L 172
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 221 IIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGL 266
++ T + +LH IIHRD+ A NIL D ++K++DFG+
Sbjct: 112 VVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGV 154
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 27 LPHLDLSCNKLNGEISTFLSHILGILGLYV---QFKIPPDLCNLVQLEYFDFSMNMLGGH 83
L HLD+S NKL+G+ S +S + L + QF P L L+Y + N G
Sbjct: 222 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGE 281
Query: 84 IPEKNIDLCGKIMGLD 99
IP+ C + GLD
Sbjct: 282 IPDFLSGACDTLTGLD 297
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 51/135 (37%), Gaps = 32/135 (23%)
Query: 4 TQKKIL-IRDNLGMPPIIPKNLNELPHLDLSCNKLNGEISTFLSHI------LGILGLYV 56
T+ K+L I N + PI P L L +L L+ NK GEI FLS L + G +
Sbjct: 244 TELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHF 303
Query: 57 QFKIPP-------------------------DLCNLVQLEYFDFSMNMLGGHIPEKNIDL 91
+PP L + L+ D S N G +PE +L
Sbjct: 304 YGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNL 363
Query: 92 CGKIMGLDYQVLTFS 106
++ LD FS
Sbjct: 364 SASLLTLDLSSNNFS 378
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 68/161 (42%), Gaps = 17/161 (10%)
Query: 15 GMPPIIPKNLNELPHLDLSCNKLNGEISTFLSHILGILGLYVQF-----KIPPDLCNLVQ 69
G P +L++L L L N L GEI L ++ + L + F +IP L N
Sbjct: 429 GTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTN 488
Query: 70 LEYFDFSMNMLGGHIPEKNIDLCGKIMGLDYQVLTFSKLALFGTVVGSVLAIAIIVSMLW 129
L + S N L G IP+ G++ L +L S + G + + ++
Sbjct: 489 LNWISLSNNRLTGEIPK----WIGRLENL--AILKLSNNSFSGNIPAELGDCRSLI---- 538
Query: 130 WIQRGNRQQHLSINLAMFEPSLGKLTYDQIVAGTNKFYEKN 170
W+ + +I AMF+ S GK+ + +AG Y KN
Sbjct: 539 WLDLNTNLFNGTIPAAMFKQS-GKIAAN-FIAGKRYVYIKN 577
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 11/80 (13%)
Query: 18 PIIPKNL-----NELPHLDLSCNKLNGEISTFLSHILGILGLYVQFK-----IPPDLCNL 67
PI+P NL N L L L N G+I LS+ ++ L++ F IP L +L
Sbjct: 380 PILP-NLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL 438
Query: 68 VQLEYFDFSMNMLGGHIPEK 87
+L +NML G IP++
Sbjct: 439 SKLRDLKLWLNMLEGEIPQE 458
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 20 IPKNLNELPHL---DLSCNKLNGEISTFLSHILG--ILGLY---VQFKIPPDLCNLVQLE 71
IPK + +P+L +L N ++G I + + G IL L + +IP + L L
Sbjct: 645 IPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 704
Query: 72 YFDFSMNMLGGHIPE 86
D S N L G IPE
Sbjct: 705 EIDLSNNNLSGPIPE 719
Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 30 LDLSCNKLNGEISTFLSHIL--GILGLYVQ-----FKIPPDLCNLVQLEYFDFSMNMLGG 82
LDLS N +G I L + LY+Q KIPP L N +L S N L G
Sbjct: 370 LDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSG 429
Query: 83 HIPEK 87
IP
Sbjct: 430 TIPSS 434
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGIT 231
++ K++V G C G++ ++V E++ GSL+ +L+ + K+CI +A A +
Sbjct: 69 LSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQLAAAMH 127
Query: 232 FLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRL 269
FL + +IH ++ A NILL + + K + ++L
Sbjct: 128 FLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKL 162
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 27 LPHLDLSCNKLNGEISTFLSHILGILGLYV---QFKIPPDLCNLVQLEYFDFSMNMLGGH 83
L HLD+S NKL+G+ S +S + L + QF P L L+Y + N G
Sbjct: 225 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGE 284
Query: 84 IPEKNIDLCGKIMGLD 99
IP+ C + GLD
Sbjct: 285 IPDFLSGACDTLTGLD 300
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 51/135 (37%), Gaps = 32/135 (23%)
Query: 4 TQKKIL-IRDNLGMPPIIPKNLNELPHLDLSCNKLNGEISTFLSHI------LGILGLYV 56
T+ K+L I N + PI P L L +L L+ NK GEI FLS L + G +
Sbjct: 247 TELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHF 306
Query: 57 QFKIPP-------------------------DLCNLVQLEYFDFSMNMLGGHIPEKNIDL 91
+PP L + L+ D S N G +PE +L
Sbjct: 307 YGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNL 366
Query: 92 CGKIMGLDYQVLTFS 106
++ LD FS
Sbjct: 367 SASLLTLDLSSNNFS 381
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 17/153 (11%)
Query: 23 NLNELPHLDLSCNKLNGEISTFLSHILGILGLYVQF-----KIPPDLCNLVQLEYFDFSM 77
+L++L L L N L GEI L ++ + L + F +IP L N L + S
Sbjct: 440 SLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSN 499
Query: 78 NMLGGHIPEKNIDLCGKIMGLDYQVLTFSKLALFGTVVGSVLAIAIIVSMLWWIQRGNRQ 137
N L G IP+ G++ L +L S + G + + ++ W+
Sbjct: 500 NRLTGEIPK----WIGRLENL--AILKLSNNSFSGNIPAELGDCRSLI----WLDLNTNL 549
Query: 138 QHLSINLAMFEPSLGKLTYDQIVAGTNKFYEKN 170
+ +I AMF+ S GK+ + +AG Y KN
Sbjct: 550 FNGTIPAAMFKQS-GKIAAN-FIAGKRYVYIKN 580
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 11/80 (13%)
Query: 18 PIIPKNL-----NELPHLDLSCNKLNGEISTFLSHILGILGLYVQFK-----IPPDLCNL 67
PI+P NL N L L L N G+I LS+ ++ L++ F IP L +L
Sbjct: 383 PILP-NLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL 441
Query: 68 VQLEYFDFSMNMLGGHIPEK 87
+L +NML G IP++
Sbjct: 442 SKLRDLKLWLNMLEGEIPQE 461
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 20 IPKNLNELPHLD---LSCNKLNGEISTFLSHI--LGILGL---YVQFKIPPDLCNLVQLE 71
IP L+ +L+ LS N+L GEI ++ + L IL L IP +L + L
Sbjct: 482 IPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLI 541
Query: 72 YFDFSMNMLGGHIPEKNIDLCGKI 95
+ D + N+ G IP GKI
Sbjct: 542 WLDLNTNLFNGTIPAAMFKQSGKI 565
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 20 IPKNLNELPHL---DLSCNKLNGEISTFLSHILG--ILGLY---VQFKIPPDLCNLVQLE 71
IPK + +P+L +L N ++G I + + G IL L + +IP + L L
Sbjct: 648 IPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 707
Query: 72 YFDFSMNMLGGHIPE 86
D S N L G IPE
Sbjct: 708 EIDLSNNNLSGPIPE 722
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 30 LDLSCNKLNGEISTFLSHIL--GILGLYVQF-----KIPPDLCNLVQLEYFDFSMNMLGG 82
LDLS N +G I L + LY+Q KIPP L N +L S N L G
Sbjct: 373 LDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSG 432
Query: 83 HIPEK 87
IP
Sbjct: 433 TIPSS 437
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 17/140 (12%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHC-----IIACGTARGITFLHHR 236
++I QL K +V EY G L D++ +Q + ++ + ++H +
Sbjct: 68 QHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQ 127
Query: 237 FQPHIIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI-------- 288
HRD+ N+L +E ++K+ DFGL + + G++ Y
Sbjct: 128 ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGK 184
Query: 289 -LLACGGDIYSFSVVLLELV 307
L D++S ++L L+
Sbjct: 185 SYLGSEADVWSMGILLYVLM 204
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 36/204 (17%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI-------IACGTARGITFLHH 235
NIV+L G + +V E++ G L L ++A H I + A GI ++ +
Sbjct: 84 NIVKLYGL--MHNPPRMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQN 140
Query: 236 RFQPHIIHRDINASNILL-----NEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILL 290
+ P I+HRD+ + NI L N KV+DF L S H+ + + G ++
Sbjct: 141 Q-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSL----SQQSVHSVSGLLGNFQWMAP 195
Query: 291 ACGG----------DIYSFSVVLLELVIRKQPTGPEFKDKNGGNL--VDWVLDSTILNAY 338
G D YSF+++L ++ + P F + + G + ++ + + +
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGP----FDEYSYGKIKFINMIREEGLRPTI 251
Query: 339 SKPSMLKMLQIVVGCIFDNPTTRP 362
+ ++ ++ C +P RP
Sbjct: 252 PEDCPPRLRNVIELCWSGDPKKRP 275
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGL 266
+ FLH + IIHRD+ A N+L+ + +++++DFG+
Sbjct: 120 EALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGV 155
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 25/157 (15%)
Query: 193 VGEKKLIVYEYMVKGSLNDWLRNQAKHCII-------ACGTARGITFLHHRFQPHIIHRD 245
+K V +Y+ G L + Q + C + A A + +LH +I++RD
Sbjct: 110 TADKLYFVLDYINGGEL--FYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRD 164
Query: 246 INASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYILLAC--------GGDIY 297
+ NILL+ + ++DFGL + + S TST GT Y+ D +
Sbjct: 165 LKPENILLDSQGHIVLTDFGLCKENIEHNSTTST-FCGTPEYLAPEVLHKQPYDRTVDWW 223
Query: 298 SFSVVLLELVIRKQPTGPEFKDKNGGNLVDWVLDSTI 334
VL E++ P F +N + D +L+ +
Sbjct: 224 CLGAVLYEMLY----GLPPFYSRNTAEMYDNILNKPL 256
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGL 266
+ FLH + IIHRD+ A N+L+ + +++++DFG+
Sbjct: 128 EALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGV 163
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 15/110 (13%)
Query: 215 NQAKHCIIACGTARGITFLHHRFQPHIIHRDINASNILL---NEDFEVKVSDFGLVRLIS 271
N+ +I G+T+LH + +I+HRD+ N+LL +D +K+ DFGL +
Sbjct: 134 NEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190
Query: 272 DCESHTSTDVAGTIGYILLAC-------GGDIYSFSVVLLELVIRKQPTG 314
+ + GT YI D++S V+L L+ P G
Sbjct: 191 N--QKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFG 238
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 35.0 bits (79), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 25/143 (17%)
Query: 194 GEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTA-------------RGITFLHHRFQPH 240
GEKK +VY +V + + + A+H A T R + ++H
Sbjct: 86 GEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---G 142
Query: 241 IIHRDINASNILLNEDFEV-KVSDFGLVRLISDCESHTSTDVAGTIGYILLACGG----- 294
I HRDI N+LL+ D V K+ DFG + + E + S + L G
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTS 202
Query: 295 --DIYSFSVVLLELVIRKQPTGP 315
D++S VL EL++ QP P
Sbjct: 203 SIDVWSAGCVLAELLL-GQPIFP 224
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 35.0 bits (79), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 231 TFLHHRFQPHIIHRDINASNILL--NEDFEVKVSDFGLVR---LISDCESHTSTDVAGTI 285
+ LH+ I HRDI N L N+ FE+K+ DFGL + +++ E + T AGT
Sbjct: 179 SALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTP 238
Query: 286 GYI 288
++
Sbjct: 239 YFV 241
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY--------ILLAC 292
++HRD+ +N+ L+ VK+ DFGL R+++ S T V GT Y +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRMSYNE 195
Query: 293 GGDIYSFSVVLLEL 306
DI+S +L EL
Sbjct: 196 KSDIWSLGCLLYEL 209
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 73/174 (41%), Gaps = 38/174 (21%)
Query: 227 ARGITFLHHRFQPHIIHRDINASNILLN-------------EDFEVKVSDFGLVRLISDC 273
A G+ LH IIHRD+ NIL++ E+ + +SDFGL + +
Sbjct: 125 ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 274 ESHTSTDV---AGTIGYIL---------------LACGGDIYSFSVVLLELVIR-KQPTG 314
+S T++ +GT G+ L DI+S V ++ + K P G
Sbjct: 182 QSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241
Query: 315 PEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFD-NPTTRPTMLRV 367
++ ++ N++ + + S++ ++ + D +P RPT ++V
Sbjct: 242 DKYSRES--NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 293
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 179 IAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI---IACGTARGITFLHH 235
++ K++V G C G++ ++V E++ GSL+ +L+ + K+CI A+ + + H
Sbjct: 69 LSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQLAWAMH 127
Query: 236 RFQPH-IIHRDINASNILLNEDFEVKVSDFGLVRL 269
+ + +IH ++ A NILL + + K + ++L
Sbjct: 128 FLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKL 162
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 72/178 (40%), Gaps = 35/178 (19%)
Query: 169 KNVIRGDDFGIAFKNIVQLLGYCPV----------GEKKLIVYEYMVKGSLNDWLRNQAK 218
K V++G F I++ L +C + GEKK VY +V + + + A+
Sbjct: 51 KKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR 110
Query: 219 HCIIACGTA-------------RGITFLHHRFQPHIIHRDINASNILLNEDFEV-KVSDF 264
H A T R + ++H I HRDI N+LL+ D V K+ DF
Sbjct: 111 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDF 167
Query: 265 GLVRLISDCESHTSTDVAGTIGYILLACGG-------DIYSFSVVLLELVIRKQPTGP 315
G + + E + S + L G D++S VL EL++ QP P
Sbjct: 168 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFP 224
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 34.7 bits (78), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 41/104 (39%), Gaps = 18/104 (17%)
Query: 182 KNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCI------------IACGTARG 229
+NIV+ +G + I+ E M G L +LR +A A G
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 230 ITFLHHRFQPHIIHRDINASNILLN---EDFEVKVSDFGLVRLI 270
+L H IHRDI A N LL K+ DFG+ + I
Sbjct: 154 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDI 194
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 13/106 (12%)
Query: 170 NVIRGDDF----GIAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQA----KHCI 221
V R ++ G+ IV L G G I E + GSL ++ Q +
Sbjct: 129 EVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRAL 188
Query: 222 IACGTA-RGITFLHHRFQPHIIHRDINASNILLNED-FEVKVSDFG 265
G A G+ +LH R I+H D+ A N+LL+ D + DFG
Sbjct: 189 YYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFG 231
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY--------ILLAC 292
++HRD+ +N+ L+ VK+ DFGL R+++ E + + GT Y +
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDF-AKEFVGTPYYMSPEQMNRMSYNE 195
Query: 293 GGDIYSFSVVLLEL 306
DI+S +L EL
Sbjct: 196 KSDIWSLGCLLYEL 209
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 72/178 (40%), Gaps = 35/178 (19%)
Query: 169 KNVIRGDDFGIAFKNIVQLLGYCPV----------GEKKLIVYEYMVKGSLNDWLRNQAK 218
K V++G F I++ L +C + GEKK VY +V + + + A+
Sbjct: 51 KKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR 110
Query: 219 HCIIACGTA-------------RGITFLHHRFQPHIIHRDINASNILLNEDFEV-KVSDF 264
H A T R + ++H I HRDI N+LL+ D V K+ DF
Sbjct: 111 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDF 167
Query: 265 GLVRLISDCESHTSTDVAGTIGYILLACGG-------DIYSFSVVLLELVIRKQPTGP 315
G + + E + S + L G D++S VL EL++ QP P
Sbjct: 168 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFP 224
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 13/106 (12%)
Query: 170 NVIRGDDF----GIAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQA----KHCI 221
V R ++ G+ IV L G G I E + GSL ++ Q +
Sbjct: 110 EVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRAL 169
Query: 222 IACGTA-RGITFLHHRFQPHIIHRDINASNILLNED-FEVKVSDFG 265
G A G+ +LH R I+H D+ A N+LL+ D + DFG
Sbjct: 170 YYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFG 212
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLN---EDFEVKVSDFG---------LVRLISDCESH 276
+ +LH IIHRD+ N+LL+ ED +K++DFG L+R + ++
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 277 TSTDVAGTIGYILLACGGDIYSFSVVLL 304
+ +V ++G D +S V+L
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLN---EDFEVKVSDFG---------LVRLISDCESH 276
+ +LH IIHRD+ N+LL+ ED +K++DFG L+R + ++
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 277 TSTDVAGTIGYILLACGGDIYSFSVVLL 304
+ +V ++G D +S V+L
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLN---EDFEVKVSDFG---------LVRLISDCESH 276
+ +LH IIHRD+ N+LL+ ED +K++DFG L+R + ++
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 277 TSTDVAGTIGYILLACGGDIYSFSVVLL 304
+ +V ++G D +S V+L
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILF 210
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLN---EDFEVKVSDFG---------LVRLISDCESH 276
+ +LH IIHRD+ N+LL+ ED +K++DFG L+R + ++
Sbjct: 125 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 181
Query: 277 TSTDVAGTIGYILLACGGDIYSFSVVLL 304
+ +V ++G D +S V+L
Sbjct: 182 LAPEVLVSVGTAGYNRAVDCWSLGVILF 209
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLN---EDFEVKVSDFG---------LVRLISDCESH 276
+ +LH IIHRD+ N+LL+ ED +K++DFG L+R + ++
Sbjct: 132 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 188
Query: 277 TSTDVAGTIGYILLACGGDIYSFSVVLL 304
+ +V ++G D +S V+L
Sbjct: 189 LAPEVLVSVGTAGYNRAVDCWSLGVILF 216
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 15/88 (17%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLN---EDFEVKVSDFG---------LVRLISDCESH 276
+ +LH + IIHRD+ N+LL+ ED +K++DFG L+R + ++
Sbjct: 265 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 321
Query: 277 TSTDVAGTIGYILLACGGDIYSFSVVLL 304
+ +V ++G D +S V+L
Sbjct: 322 LAPEVLVSVGTAGYNRAVDCWSLGVILF 349
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 15/88 (17%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLN---EDFEVKVSDFG---------LVRLISDCESH 276
+ +LH + IIHRD+ N+LL+ ED +K++DFG L+R + ++
Sbjct: 251 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 307
Query: 277 TSTDVAGTIGYILLACGGDIYSFSVVLL 304
+ +V ++G D +S V+L
Sbjct: 308 LAPEVLVSVGTAGYNRAVDCWSLGVILF 335
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 217 AKHCIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFE---VKVSDFGLVRLISDC 273
A HCI + + ++H Q I+HRD+ N+LL + VK++DFGL +
Sbjct: 132 ASHCI-----HQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG- 185
Query: 274 ESHTSTDVAGTIGYI 288
E AGT GY+
Sbjct: 186 EQQAWFGFAGTPGYL 200
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
+ +LH + ++++RD+ N++L++D +K++DFGL +
Sbjct: 260 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK 297
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS---DCESHTSTDVAGTIGYILLACGGDIY 297
IIHR++ NI ++E VK+ DFGL + + D S ++ G+ + A G Y
Sbjct: 137 IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXY 196
Query: 298 SFSVVL 303
+ VL
Sbjct: 197 VATEVL 202
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 229 GITFLHHRFQPHIIHRDINASNILL---NEDFEVKVSDFGLVRLISDCESHTSTDVAGTI 285
GIT++H + I+HRD+ N+LL ++D +++ DFGL S D GT
Sbjct: 144 GITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKKMKDKIGTA 198
Query: 286 GYI 288
YI
Sbjct: 199 YYI 201
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
+ +LH + ++++RD+ N++L++D +K++DFGL +
Sbjct: 263 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK 300
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
+ +LH + ++++RD+ N++L++D +K++DFGL +
Sbjct: 121 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK 158
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
+ +LH + ++++RD+ N++L++D +K++DFGL +
Sbjct: 120 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK 157
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
+ +LH + ++++RD+ N++L++D +K++DFGL +
Sbjct: 122 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK 159
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 35/178 (19%)
Query: 169 KNVIRGDDFGIAFKNIVQLLGYCPV----------GEKKLIVYEYMVKGSLNDWLRNQAK 218
K V++G F I++ L +C + GEKK VY +V + + A+
Sbjct: 51 KKVLQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVAR 110
Query: 219 HCIIACGTA-------------RGITFLHHRFQPHIIHRDINASNILLNEDFEV-KVSDF 264
H A T R + ++H I HRDI N+LL+ D V K+ DF
Sbjct: 111 HYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDF 167
Query: 265 GLVRLISDCESHTSTDVAGTIGYILLACGG-------DIYSFSVVLLELVIRKQPTGP 315
G + + E + S + L G D++S VL EL++ QP P
Sbjct: 168 GSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFP 224
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 25/164 (15%)
Query: 16 MPPIIPKNLNELPHLDLSCNKLNGEISTFLSHILGILGLYVQFK-----IPPDLCNLVQL 70
+PP I K L +L +L ++ ++G I FLS I ++ L + +PP + +L L
Sbjct: 93 IPPAIAK-LTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNL 151
Query: 71 EYFDFSMNMLGGHIPEKNIDLCGKIMGLDYQVLTFSKLALFGTVVGSV--LAIAII---- 124
F N + G IP D G L + +T S+ L G + + L +A +
Sbjct: 152 VGITFDGNRISGAIP----DSYGSFSKL-FTSMTISRNRLTGKIPPTFANLNLAFVDLSR 206
Query: 125 ------VSMLWWIQRGNRQQHLSINLAMFEPSLGKLTYDQIVAG 162
S+L+ + ++ HL+ N F+ LGK+ + + G
Sbjct: 207 NMLEGDASVLFGSDKNTQKIHLAKNSLAFD--LGKVGLSKNLNG 248
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 24/124 (19%)
Query: 13 NLGMPPIIPKNLNELPHLDLSCNKLNGEISTFLSHILGILGLYVQFKIPPDLCNLVQLEY 72
NL P IP +L LP+L+ ++ I ++G IPP + L QL Y
Sbjct: 61 NLPKPYPIPSSLANLPYLNF----------LYIGGINNLVG-----PIPPAIAKLTQLHY 105
Query: 73 FDFSMNMLGGHIPEKNIDLCGKIMGLDYQVLTFSKLALFGTVVGSVLAIAIIVSMLWWIQ 132
+ + G IP D +I L L FS AL GT+ S+ ++ +V + +
Sbjct: 106 LYITHTNVSGAIP----DFLSQIKTL--VTLDFSYNALSGTLPPSISSLPNLVGITF--- 156
Query: 133 RGNR 136
GNR
Sbjct: 157 DGNR 160
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 57/141 (40%), Gaps = 26/141 (18%)
Query: 198 LIVYEYMVKGSLNDWLRNQAKHCIIACGTARG---------ITFLHHRFQPHIIHRDINA 248
L+ EY G L +L NQ ++C CG G + L + + IIHRD+
Sbjct: 95 LLAMEYCEGGDLRKYL-NQFENC---CGLKEGPIRTLLSDISSALRYLHENRIIHRDLKP 150
Query: 249 SNILLNEDFEV---KVSDFGLVRLISDCESHTSTDVAGTIGYIL--------LACGGDIY 297
NI+L + K+ D G + + E T+ GT+ Y+ D +
Sbjct: 151 ENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYW 208
Query: 298 SFSVVLLELVIRKQPTGPEFK 318
SF + E + +P P ++
Sbjct: 209 SFGTLAFECITGFRPFLPNWQ 229
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 57/141 (40%), Gaps = 26/141 (18%)
Query: 198 LIVYEYMVKGSLNDWLRNQAKHCIIACGTARG---------ITFLHHRFQPHIIHRDINA 248
L+ EY G L +L NQ ++C CG G + L + + IIHRD+
Sbjct: 94 LLAMEYCEGGDLRKYL-NQFENC---CGLKEGPIRTLLSDISSALRYLHENRIIHRDLKP 149
Query: 249 SNILLNEDFEV---KVSDFGLVRLISDCESHTSTDVAGTIGYIL--------LACGGDIY 297
NI+L + K+ D G + + E T+ GT+ Y+ D +
Sbjct: 150 ENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYW 207
Query: 298 SFSVVLLELVIRKQPTGPEFK 318
SF + E + +P P ++
Sbjct: 208 SFGTLAFECITGFRPFLPNWQ 228
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 229 GITFLHHRFQPHIIHRDINASNILL---NEDFEVKVSDFGLVRLISDCESHTSTDVAGTI 285
GIT++H + I+HRD+ N+LL ++D +++ DFGL S D GT
Sbjct: 138 GITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKKMKDKIGTA 192
Query: 286 GYI 288
YI
Sbjct: 193 YYI 195
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 217 AKHCIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFE---VKVSDFGLVRLISDC 273
A HCI + + + H Q ++HRD+ N+LL + VK++DFGL + +
Sbjct: 123 ASHCI-----QQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEG 176
Query: 274 ESHTSTDVAGTIGYI 288
E AGT GY+
Sbjct: 177 EQQAWFGFAGTPGYL 191
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 229 GITFLHHRFQPHIIHRDINASNILL---NEDFEVKVSDFGLVRLISDCESHTSTDVAGTI 285
GIT++H + I+HRD+ N+LL ++D +++ DFGL S D GT
Sbjct: 161 GITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKKMKDKIGTA 215
Query: 286 GYI 288
YI
Sbjct: 216 YYI 218
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 22/31 (70%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
++HRD+ +N+ L+ VK+ DFGL R+++
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILN 167
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 229 GITFLHHRFQPHIIHRDINASNILL---NEDFEVKVSDFGLVRLISDCESHTSTDVAGTI 285
GIT++H + I+HRD+ N+LL ++D +++ DFGL S D GT
Sbjct: 162 GITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKKMKDKIGTA 216
Query: 286 GYI 288
YI
Sbjct: 217 YYI 219
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 230 ITFLHHRFQPHIIHRDINASNILL---NEDFEVKVSDFGLVRL 269
++ + H ++HRD+ N+L N++ E+K+ DFG RL
Sbjct: 116 VSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 26/155 (16%)
Query: 183 NIVQL-LGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTA-------------R 228
NIV+L + GEKK VY +V + + + A+H A T R
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEV-KVSDFGLVRLISDCESHTSTDVAGTIGY 287
+ ++H I HRDI N+LL+ D V K+ DFG + + E + S +
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 190
Query: 288 ILLACGG-------DIYSFSVVLLELVIRKQPTGP 315
L G D++S VL EL++ QP P
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFP 224
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 26/155 (16%)
Query: 183 NIVQL-LGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTA-------------R 228
NIV+L + GEKK VY +V + + + A+H A T R
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEV-KVSDFGLVRLISDCESHTSTDVAGTIGY 287
+ ++H I HRDI N+LL+ D V K+ DFG + + E + S +
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 190
Query: 288 ILLACGG-------DIYSFSVVLLELVIRKQPTGP 315
L G D++S VL EL++ QP P
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFP 224
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 59/143 (41%), Gaps = 25/143 (17%)
Query: 194 GEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTA-------------RGITFLHHRFQPH 240
GEKK VY +V + + + A+H A T R + ++H
Sbjct: 87 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---G 143
Query: 241 IIHRDINASNILLNEDFEV-KVSDFGLVRLISDCESHTSTDVAGTIGYILLACGG----- 294
I HRDI N+LL+ D V K+ DFG + + E + S + L G
Sbjct: 144 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTS 203
Query: 295 --DIYSFSVVLLELVIRKQPTGP 315
D++S VL EL++ QP P
Sbjct: 204 SIDVWSAGCVLAELLL-GQPIFP 225
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 59/143 (41%), Gaps = 25/143 (17%)
Query: 194 GEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTA-------------RGITFLHHRFQPH 240
GEKK VY +V + + + A+H A T R + ++H
Sbjct: 90 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---G 146
Query: 241 IIHRDINASNILLNEDFEV-KVSDFGLVRLISDCESHTSTDVAGTIGYILLACGG----- 294
I HRDI N+LL+ D V K+ DFG + + E + S + L G
Sbjct: 147 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTS 206
Query: 295 --DIYSFSVVLLELVIRKQPTGP 315
D++S VL EL++ QP P
Sbjct: 207 SIDVWSAGCVLAELLL-GQPIFP 228
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 71/170 (41%), Gaps = 34/170 (20%)
Query: 227 ARGITFLHHRFQPHIIHRDINASNILLN-------------EDFEVKVSDFGLVRLISDC 273
A G+ LH IIHRD+ NIL++ E+ + +SDFGL + +
Sbjct: 143 ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 274 ESHTSTDV---AGTIGYIL-----------LACGGDIYSFSVVLLELVIR-KQPTGPEFK 318
+ ++ +GT G+ L DI+S V ++ + K P G ++
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 259
Query: 319 DKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFD-NPTTRPTMLRV 367
++ N++ + + S++ ++ + D +P RPT ++V
Sbjct: 260 RES--NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 307
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 26/155 (16%)
Query: 183 NIVQL-LGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTA-------------R 228
NIV+L + GEKK VY +V + + + A+H A T R
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEV-KVSDFGLVRLISDCESHTSTDVAGTIGY 287
+ ++H I HRDI N+LL+ D V K+ DFG + + E + S +
Sbjct: 146 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 202
Query: 288 ILLACGG-------DIYSFSVVLLELVIRKQPTGP 315
L G D++S VL EL++ QP P
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFP 236
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 26/155 (16%)
Query: 183 NIVQL-LGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTA-------------R 228
NIV+L + GEKK VY +V + + + A+H A T R
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 141
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEV-KVSDFGLVRLISDCESHTSTDVAGTIGY 287
+ ++H I HRDI N+LL+ D V K+ DFG + + E + S +
Sbjct: 142 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 198
Query: 288 ILLACGG-------DIYSFSVVLLELVIRKQPTGP 315
L G D++S VL EL++ QP P
Sbjct: 199 PELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFP 232
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 71/170 (41%), Gaps = 34/170 (20%)
Query: 227 ARGITFLHHRFQPHIIHRDINASNILLN-------------EDFEVKVSDFGLVRLISDC 273
A G+ LH IIHRD+ NIL++ E+ + +SDFGL + +
Sbjct: 143 ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 199
Query: 274 ESHTSTDV---AGTIGYIL-----------LACGGDIYSFSVVLLELVIR-KQPTGPEFK 318
+ ++ +GT G+ L DI+S V ++ + K P G ++
Sbjct: 200 QXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 259
Query: 319 DKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFD-NPTTRPTMLRV 367
++ N++ + + S++ ++ + D +P RPT ++V
Sbjct: 260 RES--NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 307
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 26/155 (16%)
Query: 183 NIVQL-LGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTA-------------R 228
NIV+L + GEKK VY +V + + + A+H A T R
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 152
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEV-KVSDFGLVRLISDCESHTSTDVAGTIGY 287
+ ++H I HRDI N+LL+ D V K+ DFG + + E + S +
Sbjct: 153 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 209
Query: 288 ILLACGG-------DIYSFSVVLLELVIRKQPTGP 315
L G D++S VL EL++ QP P
Sbjct: 210 PELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFP 243
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 26/155 (16%)
Query: 183 NIVQL-LGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTA-------------R 228
NIV+L + GEKK VY +V + + + A+H A T R
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEV-KVSDFGLVRLISDCESHTSTDVAGTIGY 287
+ ++H I HRDI N+LL+ D V K+ DFG + + E + S +
Sbjct: 146 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 202
Query: 288 ILLACGG-------DIYSFSVVLLELVIRKQPTGP 315
L G D++S VL EL++ QP P
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFP 236
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 26/155 (16%)
Query: 183 NIVQL-LGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTA-------------R 228
NIV+L + GEKK VY +V + + + A+H A T R
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEV-KVSDFGLVRLISDCESHTSTDVAGTIGY 287
+ ++H I HRDI N+LL+ D V K+ DFG + + E + S +
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 190
Query: 288 ILLACGG-------DIYSFSVVLLELVIRKQPTGP 315
L G D++S VL EL++ QP P
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFP 224
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 215 NQAKHCIIACGTARGITFLHHRFQPHIIHRDINASNILL---NEDFEVKVSDFGL 266
++ +I G T+LH + +I+HRD+ N+LL + D +K+ DFGL
Sbjct: 119 SEVDAAVIMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGL 170
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 229 GITFLHHRFQPHIIHRDINASNILL---NEDFEVKVSDFGLVRLISDCESHTSTDVAGTI 285
GIT+ H + I+HRD+ N+LL ++D +++ DFGL S D GT
Sbjct: 138 GITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKKXKDKIGTA 192
Query: 286 GYI 288
YI
Sbjct: 193 YYI 195
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 9/94 (9%)
Query: 178 GIAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQA----KHCIIACGTA-RGITF 232
G++ IV L G G I E + GSL ++ + G A G+ +
Sbjct: 120 GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEY 179
Query: 233 LHHRFQPHIIHRDINASNILLNED-FEVKVSDFG 265
LH R I+H D+ A N+LL+ D + DFG
Sbjct: 180 LHTR---RILHGDVKADNVLLSSDGSRAALCDFG 210
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 32.3 bits (72), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDW--LR---NQAKHCIIACGTARGITFLHHRF 237
NI++L + +V E G L D LR ++ +I G T+LH
Sbjct: 65 NIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH--- 121
Query: 238 QPHIIHRDINASNILL---NEDFEVKVSDFGL 266
+ +I+HRD+ N+LL + D +K+ DFGL
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGL 153
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 26/155 (16%)
Query: 183 NIVQL-LGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTA-------------R 228
NIV+L + GEKK VY +V + + + A+H A T R
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 146
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEV-KVSDFGLVRLISDCESHTSTDVAGTIGY 287
+ ++H I HRDI N+LL+ D V K+ DFG + + E + S +
Sbjct: 147 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 203
Query: 288 ILLACGG-------DIYSFSVVLLELVIRKQPTGP 315
L G D++S VL EL++ QP P
Sbjct: 204 PELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFP 237
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 26/155 (16%)
Query: 183 NIVQL-LGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTA-------------R 228
NIV+L + GEKK VY +V + + + A+H A T R
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEV-KVSDFGLVRLISDCESHTSTDVAGTIGY 287
+ ++H I HRDI N+LL+ D V K+ DFG + + E + S +
Sbjct: 168 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 224
Query: 288 ILLACGG-------DIYSFSVVLLELVIRKQPTGP 315
L G D++S VL EL++ QP P
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFP 258
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 9/94 (9%)
Query: 178 GIAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQA----KHCIIACGTA-RGITF 232
G++ IV L G G I E + GSL ++ + G A G+ +
Sbjct: 106 GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEY 165
Query: 233 LHHRFQPHIIHRDINASNILLNED-FEVKVSDFG 265
LH R I+H D+ A N+LL+ D + DFG
Sbjct: 166 LHTR---RILHGDVKADNVLLSSDGSRAALCDFG 196
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 9/94 (9%)
Query: 178 GIAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQA----KHCIIACGTA-RGITF 232
G++ IV L G G I E + GSL ++ + G A G+ +
Sbjct: 122 GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEY 181
Query: 233 LHHRFQPHIIHRDINASNILLNED-FEVKVSDFG 265
LH R I+H D+ A N+LL+ D + DFG
Sbjct: 182 LHTR---RILHGDVKADNVLLSSDGSRAALCDFG 212
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 26/155 (16%)
Query: 183 NIVQL-LGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTA-------------R 228
NIV+L + GEKK VY +V + + + A+H A T R
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 138
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEV-KVSDFGLVRLISDCESHTSTDVAGTIGY 287
+ ++H I HRDI N+LL+ D V K+ DFG + + E + S +
Sbjct: 139 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 195
Query: 288 ILLACGG-------DIYSFSVVLLELVIRKQPTGP 315
L G D++S VL EL++ QP P
Sbjct: 196 PELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFP 229
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 26/155 (16%)
Query: 183 NIVQL-LGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTA-------------R 228
NIV+L + GEKK VY +V + + + A+H A T R
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEV-KVSDFGLVRLISDCESHTSTDVAGTIGY 287
+ ++H I HRDI N+LL+ D V K+ DFG + + E + S +
Sbjct: 168 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 224
Query: 288 ILLACGG-------DIYSFSVVLLELVIRKQPTGP 315
L G D++S VL EL++ QP P
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFP 258
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 26/155 (16%)
Query: 183 NIVQL-LGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTA-------------R 228
NIV+L + GEKK VY +V + + + A+H A T R
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 161
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEV-KVSDFGLVRLISDCESHTSTDVAGTIGY 287
+ ++H I HRDI N+LL+ D V K+ DFG + + E + S +
Sbjct: 162 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 218
Query: 288 ILLACGG-------DIYSFSVVLLELVIRKQPTGP 315
L G D++S VL EL++ QP P
Sbjct: 219 PELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFP 252
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 240 HIIHRDINASNILLNE-DFEVKVSDFGLVRLISDCESHTS 278
++ HRDI N+L+NE D +K+ DFG + +S E + +
Sbjct: 151 NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA 190
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 59/143 (41%), Gaps = 25/143 (17%)
Query: 194 GEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTA-------------RGITFLHHRFQPH 240
GEKK VY +V + + + A+H A T R + ++H
Sbjct: 122 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---G 178
Query: 241 IIHRDINASNILLNEDFEV-KVSDFGLVRLISDCESHTSTDVAGTIGYILLACGG----- 294
I HRDI N+LL+ D V K+ DFG + + E + S + L G
Sbjct: 179 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTS 238
Query: 295 --DIYSFSVVLLELVIRKQPTGP 315
D++S VL EL++ QP P
Sbjct: 239 SIDVWSAGCVLAELLL-GQPIFP 260
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 59/143 (41%), Gaps = 25/143 (17%)
Query: 194 GEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTA-------------RGITFLHHRFQPH 240
GEKK VY +V + + + A+H A T R + ++H
Sbjct: 124 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---G 180
Query: 241 IIHRDINASNILLNEDFEV-KVSDFGLVRLISDCESHTSTDVAGTIGYILLACGG----- 294
I HRDI N+LL+ D V K+ DFG + + E + S + L G
Sbjct: 181 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTS 240
Query: 295 --DIYSFSVVLLELVIRKQPTGP 315
D++S VL EL++ QP P
Sbjct: 241 SIDVWSAGCVLAELLL-GQPIFP 262
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 26/155 (16%)
Query: 183 NIVQL-LGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTA-------------R 228
NIV+L + GEKK VY +V + + + A+H A T R
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 212
Query: 229 GITFLHHRFQPHIIHRDINASNILLNEDFEV-KVSDFGLVRLISDCESHTSTDVAGTIGY 287
+ ++H I HRDI N+LL+ D V K+ DFG + + E + S +
Sbjct: 213 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 269
Query: 288 ILLACGG-------DIYSFSVVLLELVIRKQPTGP 315
L G D++S VL EL++ QP P
Sbjct: 270 PELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFP 303
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 182 KNIVQLLG--YCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACGTA-------RGITF 232
KN++QL+ Y +K +V EY V G + + L + + C G+ +
Sbjct: 66 KNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEY 124
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVRLI 270
LH + I+H+DI N+LL +K+S G+ +
Sbjct: 125 LHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKH------CIIACGTARGITFLHHR 236
N++QL ++V EY+ G L D + +++ + + GI +H
Sbjct: 147 NLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH-- 204
Query: 237 FQPHIIHRDINASNIL-LNEDF-EVKVSDFGLVR 268
Q +I+H D+ NIL +N D ++K+ DFGL R
Sbjct: 205 -QMYILHLDLKPENILCVNRDAKQIKIIDFGLAR 237
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 31.2 bits (69), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHC-----IIACGTARGITFLHHRFQPHIIHRDINASNILL 253
+V EYM G + LR + A +LH +I+RD+ N+L+
Sbjct: 118 MVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLI 174
Query: 254 NEDFEVKVSDFGLVRLIS 271
++ +KV+DFG + +
Sbjct: 175 DQQGYIKVADFGFAKRVK 192
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHC-----IIACGTARGITFLHHRFQPHIIHRDINASNILL 253
+V EYM G + LR + A +LH +I+RD+ N+L+
Sbjct: 118 MVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLI 174
Query: 254 NEDFEVKVSDFGLVRLIS 271
++ +KV+DFG + +
Sbjct: 175 DQQGYIKVADFGFAKRVK 192
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 7/47 (14%)
Query: 229 GITFLHHRFQPHIIHRDINASNILL----NEDFEVKVSDFGLVRLIS 271
GI +LH + ++HRD+ +NIL+ E VK++D G RL +
Sbjct: 140 GIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 183
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 31/157 (19%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQA-----KHCIIACGTARGITFLHHRF 237
NI+ L G+ +V E M G L D + Q + + + + +LH +
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ- 135
Query: 238 QPHIIHRDINASNILLNEDF----EVKVSDFGLVR--------LISDCESHTSTDVAGTI 285
++HRD+ SNIL ++ +++ DFG + L++ C +T+ VA +
Sbjct: 136 --GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPC--YTANFVAPEV 191
Query: 286 ----GYILLACGGDIYSFSVVLLELVIRKQP--TGPE 316
GY AC DI+S V+L ++ P GP+
Sbjct: 192 LERQGYD-AAC--DIWSLGVLLYTMLTGYTPFANGPD 225
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
LH + ++HRD++ NILL ++ ++ + DF L R
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 243 HRDINASNILLNEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYIL--------LACGG 294
HRD+ NIL++ D + DFG+ +D + + GT+ Y
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 295 DIYSFSVVLLELVIRKQP 312
DIY+ + VL E + P
Sbjct: 217 DIYALTCVLYECLTGSPP 234
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 233 LHHRFQPHIIHRDINASNILLNEDFEVKVSDFGLVR 268
LH + ++HRD++ NILL ++ ++ + DF L R
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 71/174 (40%), Gaps = 38/174 (21%)
Query: 227 ARGITFLHHRFQPHIIHRDINASNILLN-------------EDFEVKVSDFGLVRLISDC 273
A G+ LH IIHRD+ NIL++ E+ + +SDFGL + +
Sbjct: 125 ASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181
Query: 274 ESHTSTDV---AGTIGYIL---------------LACGGDIYSFSVVLLELVIR-KQPTG 314
+ ++ +GT G+ L DI+S V ++ + K P G
Sbjct: 182 QXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241
Query: 315 PEFKDKNGGNLVDWVLDSTILNAYSKPSMLKMLQIVVGCIFD-NPTTRPTMLRV 367
++ ++ N++ + + S++ ++ + D +P RPT ++V
Sbjct: 242 DKYSRES--NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 293
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 217 AKHCIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFE---VKVSDFGLVRLISDC 273
A HCI + + + H Q ++HR++ N+LL + VK++DFGL + +
Sbjct: 112 ASHCI-----QQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEG 165
Query: 274 ESHTSTDVAGTIGYI 288
E AGT GY+
Sbjct: 166 EQQAWFGFAGTPGYL 180
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 241 IIHRDINASNILLN-EDFEVKVSDFGLVRLISDCESHTSTDVAGT--------IGYILLA 291
I+HRD+ N+L++ E ++++ D+GL + + + VA + Y +
Sbjct: 152 IMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVASRYFKGPELLVDYQMYD 210
Query: 292 CGGDIYSFSVVLLELVIRKQP 312
D++S +L ++ RK+P
Sbjct: 211 YSLDMWSLGCMLASMIFRKEP 231
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 20/122 (16%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHC-----IIACGTARGITFLHHRFQPHIIHRDINASNILL 253
+V EY+ G + LR + A +LH +I+RD+ N+L+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLI 174
Query: 254 NEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY----ILLACGG----DIYSFSVVLLE 305
++ ++V+DFG + + + +AGT Y I+L+ G D ++ V++ E
Sbjct: 175 DQQGYIQVTDFGFAKRVKG----RTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
Query: 306 LV 307
+
Sbjct: 231 MA 232
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 22/31 (70%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+++++ +KV+DFGL + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAKRVK 192
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHC-----IIACGTARGITFLHHRFQPHIIHRDINASNILL 253
+V EY+ G + LR + A +LH +I+RD+ N+L+
Sbjct: 105 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLI 161
Query: 254 NEDFEVKVSDFGLVRLIS 271
+E ++V+DFG + +
Sbjct: 162 DEQGYIQVTDFGFAKRVK 179
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 217 AKHCIIACGTARGITFLHHRFQPHIIHRDINASNILLNEDFE---VKVSDFGLVRLISDC 273
A HCI + + + H Q ++HRD+ N+LL + VK++DFGL +
Sbjct: 105 ASHCI-----QQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG- 158
Query: 274 ESHTSTDVAGTIGYI 288
+ AGT GY+
Sbjct: 159 DQQAWFGFAGTPGYL 173
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLN-----EDF-EVKVSDFGLVRLISDCESHTSTDVA 282
G+ ++H R IIH DI N+L+ E+ ++K++D G + +++
Sbjct: 143 GLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTRE 200
Query: 283 GTIGYILLA----CGGDIYSFSVVLLELV 307
+LL CG DI+S + ++ EL+
Sbjct: 201 YRSPEVLLGAPWGCGADIWSTACLIFELI 229
>pdb|2B25|A Chain A, Human Putative Trna(1-Methyladenosine)methyltransferase
pdb|2B25|B Chain B, Human Putative Trna(1-Methyladenosine)methyltransferase
Length = 336
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 32 LSCNKLNGEISTFLSHILGILGLYVQFKIPPDLCNLVQLEYFDFSMNMLGGHIPE--KNI 89
L +G +S FLS +G G + F++ D +L + Y + + H+ E N+
Sbjct: 110 LEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNV 169
Query: 90 DLCGK-IMGL--DYQVLTFSKLAL 110
D K I G D + LTF +AL
Sbjct: 170 DFIHKDISGATEDIKSLTFDAVAL 193
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 229 GITFLHHRFQPHIIHRDINASNILLN-----EDF-EVKVSDFGLVRLISDCESHTSTDVA 282
G+ ++H R IIH DI N+L+ E+ ++K++D G + +++
Sbjct: 143 GLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTRE 200
Query: 283 GTIGYILLA----CGGDIYSFSVVLLELV 307
+LL CG DI+S + ++ EL+
Sbjct: 201 YRSPEVLLGAPWGCGADIWSTACLIFELI 229
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+L+++ +KV+DFG + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAKRVK 193
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+L+++ +KV+DFG + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVK 192
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 241 IIHRDINASNILL---NEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI 288
I+HRD+ N+LL ++ VK++DFGL + + AGT GY+
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQG-DQQAWFGFAGTPGYL 173
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 241 IIHRDINASNILL---NEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGYI 288
I+HRD+ N+LL ++ VK++DFGL + + AGT GY+
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQG-DQQAWFGFAGTPGYL 173
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 228 RGITFLHHRFQPHIIHRDINASNILLN-EDFEVKVSDFGLVRLISDCESHTSTDVAGTIG 286
R + F+H I HRDI N+L+N +D +K+ DFG + + E + +
Sbjct: 152 RAVGFIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYR 208
Query: 287 YILLACGG-------DIYSFSVVLLELVIRK 310
L G D++S V EL++ K
Sbjct: 209 APELMLGATEYTPSIDLWSIGCVFGELILGK 239
>pdb|3TZT|A Chain A, The Structure Of A Protein In Glycosyl Transferase Family
8 From Anaerococcus Prevotii.
pdb|3TZT|B Chain B, The Structure Of A Protein In Glycosyl Transferase Family
8 From Anaerococcus Prevotii
Length = 276
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 12/90 (13%)
Query: 253 LNEDFEVKVSDFGLVRLISDCESHT-STDVAGTIGYILLACGGDIYSFSVVLLELVIRKQ 311
L++ +SD+ L SHT TD A + I L D Y+ ++L+ L ++
Sbjct: 117 LDDLLRTDISDYILA-----AASHTGKTDXANNVNRIRLGTDTDYYNSGLLLINLKRARE 171
Query: 312 PTGPE----FKDKNGGNLVDWVLDSTILNA 337
P+ F + N NL+ + D ILNA
Sbjct: 172 EIDPDEIFSFVEDNHXNLL--LPDQDILNA 199
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 20/127 (15%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHC-----IIACGTARGITFLHHRFQPHIIHRDINASNILL 253
+V EY+ G + LR + A +LH +I+RD+ N+L+
Sbjct: 139 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLI 195
Query: 254 NEDFEVKVSDFGLVRLISDCESHTSTDVAGTIGY----ILLACGG----DIYSFSVVLLE 305
++ ++V+DFG + + + + GT Y I+L+ G D ++ V++ E
Sbjct: 196 DQQGYIQVTDFGFAKRVKGA----TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 251
Query: 306 LVIRKQP 312
+ P
Sbjct: 252 MAAGYPP 258
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 9/63 (14%)
Query: 229 GITFLHHRFQPHIIHRDINASNILL---NEDFEVKVSDFGLVRLISDCESHTSTDVAGTI 285
+ +LH + I+HRD+ N+L E+ ++ ++DFGL ++ + T+ GT
Sbjct: 118 AVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA---CGTP 171
Query: 286 GYI 288
GY+
Sbjct: 172 GYV 174
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 11/100 (11%)
Query: 166 FYEKNVIRGDDFGIAFKNIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQAKHCIIACG 225
+ N++R ++ + I +L Y P GE +Y+ + K D R I
Sbjct: 80 LHHPNILRLYNYFYDRRRIYLILEYAPRGE----LYKELQKSCTFDEQRT----ATIMEE 131
Query: 226 TARGITFLHHRFQPHIIHRDINASNILLNEDFEVKVSDFG 265
A + + H + +IHRDI N+LL E+K++DFG
Sbjct: 132 LADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFG 168
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+++++ +KV+DFG + +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 193
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+++++ +KV+DFG + +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 193
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+++++ +KV+DFG + +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 193
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHC-----IIACGTARGITFLHHRFQPHIIHRDINASNILL 253
+V EY+ G + LR + A +LH +I+RD+ N+L+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLI 174
Query: 254 NEDFEVKVSDFGLVRLIS 271
++ ++V+DFG + +
Sbjct: 175 DQQGYIQVTDFGFAKRVK 192
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+++++ +KV+DFG + +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 193
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+++++ +KV+DFG + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 192
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+++++ +KV+DFG + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 192
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 22/31 (70%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+++++ ++V+DFGL + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAKRVK 192
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 242 IHRDINASNILLNEDFEVKVSDFG 265
+HRDI NILL+ ++++DFG
Sbjct: 184 VHRDIKPDNILLDRCGHIRLADFG 207
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHC-----IIACGTARGITFLHHRFQPHIIHRDINASNILL 253
+V EY+ G + LR + A +LH +I+RD+ N+L+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLI 174
Query: 254 NEDFEVKVSDFGLVRLIS 271
++ ++V+DFG + +
Sbjct: 175 DQQGYIQVTDFGFAKRVK 192
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHC-----IIACGTARGITFLHHRFQPHIIHRDINASNILL 253
+V EY+ G + LR + A +LH +I+RD+ N+L+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLI 174
Query: 254 NEDFEVKVSDFGLVRLIS 271
++ ++V+DFG + +
Sbjct: 175 DQQGYIQVTDFGFAKRVK 192
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHC-----IIACGTARGITFLHHRFQPHIIHRDINASNILL 253
+V EY+ G + LR + A +LH +I+RD+ N+L+
Sbjct: 119 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLI 175
Query: 254 NEDFEVKVSDFGLVRLIS 271
++ ++V+DFG + +
Sbjct: 176 DQQGYIQVTDFGFAKRVK 193
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHC-----IIACGTARGITFLHHRFQPHIIHRDINASNILL 253
+V EY+ G + LR + A +LH +I+RD+ N+L+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLI 174
Query: 254 NEDFEVKVSDFGLVRLIS 271
++ ++V+DFG + +
Sbjct: 175 DQQGYIQVTDFGFAKRVK 192
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHC-----IIACGTARGITFLHHRFQPHIIHRDINASNILL 253
+V EY+ G + LR + A +LH +I+RD+ N+L+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLI 174
Query: 254 NEDFEVKVSDFGLVRLIS 271
++ ++V+DFG + +
Sbjct: 175 DQQGYIQVTDFGFAKRVK 192
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHC-----IIACGTARGITFLHHRFQPHIIHRDINASNILL 253
+V EY+ G + LR + A +LH +I+RD+ N+L+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLI 174
Query: 254 NEDFEVKVSDFGLVRLIS 271
++ ++V+DFG + +
Sbjct: 175 DQQGYIQVTDFGFAKRVK 192
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHC-----IIACGTARGITFLHHRFQPHIIHRDINASNILL 253
+V EY+ G + LR + A +LH +I+RD+ N+L+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLI 174
Query: 254 NEDFEVKVSDFGLVRLIS 271
++ ++V+DFG + +
Sbjct: 175 DQQGYIQVTDFGFAKRVK 192
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHC-----IIACGTARGITFLHHRFQPHIIHRDINASNILL 253
+V EY+ G + LR + A +LH +I+RD+ N+L+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLI 174
Query: 254 NEDFEVKVSDFGLVRLIS 271
++ ++V+DFG + +
Sbjct: 175 DQQGYIQVTDFGFAKRVK 192
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHC-----IIACGTARGITFLHHRFQPHIIHRDINASNILL 253
+V EY+ G + LR + A +LH +I+RD+ N+L+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLI 174
Query: 254 NEDFEVKVSDFGLVRLIS 271
++ ++V+DFG + +
Sbjct: 175 DQQGYIQVTDFGFAKRVK 192
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHC-----IIACGTARGITFLHHRFQPHIIHRDINASNILL 253
+V EY+ G + LR + A +LH +I+RD+ N+L+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLI 174
Query: 254 NEDFEVKVSDFGLVRLIS 271
++ ++V+DFG + +
Sbjct: 175 DQQGYIQVTDFGFAKRVK 192
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 199 IVYEYMVKGSLNDWLRNQAKHC-----IIACGTARGITFLHHRFQPHIIHRDINASNILL 253
+V EY+ G + LR + A +LH +I+RD+ N+L+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLI 174
Query: 254 NEDFEVKVSDFGLVRLIS 271
++ ++V+DFG + +
Sbjct: 175 DQQGYIQVTDFGFAKRVK 192
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 199 IVYEYMVKGSLNDWLRN-----QAKHCIIACGTARGITFLHHRFQPHIIHRDINASNILL 253
+V EY+ G + LR + A +LH +I+RD+ N+L+
Sbjct: 139 MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLI 195
Query: 254 NEDFEVKVSDFGLVRLIS 271
++ ++V+DFG + +
Sbjct: 196 DQQGYIQVTDFGFAKRVK 213
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 199 IVYEYMVKGSLNDWLRN-----QAKHCIIACGTARGITFLHHRFQPHIIHRDINASNILL 253
+V EY+ G + LR + A +LH +I+RD+ N+L+
Sbjct: 113 MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLI 169
Query: 254 NEDFEVKVSDFGLVRLIS 271
++ ++V+DFG + +
Sbjct: 170 DQQGYIQVTDFGFAKRVK 187
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+L+++ ++V+DFG + +
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 213
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Query: 199 IVYEYMVKGSLNDWLRNQAK----HC-IIACGTARGITFLHHRFQPHIIHRDINASNILL 253
+V EY+ G + LR + H A +LH +I+RD+ N+L+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLI 174
Query: 254 NEDFEVKVSDFGLVRLIS 271
++ ++V+DFG + +
Sbjct: 175 DQQGYIQVTDFGFAKRVK 192
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Query: 226 TARGITFLHHRFQPHIIHRDINASNILL---NEDFEVK--VSDFGLVRLISDCESHTS-- 278
T G+ LH +I+HRD+ NIL+ N ++K +SDFGL + ++ S
Sbjct: 127 TTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRR 183
Query: 279 TDVAGTIGYI 288
+ V GT G+I
Sbjct: 184 SGVPGTEGWI 193
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+L+++ ++V+DFG + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 199 IVYEYMVKGSLNDWLRN-----QAKHCIIACGTARGITFLHHRFQPHIIHRDINASNILL 253
+V EY+ G + LR + A +LH +I+RD+ N+L+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLI 174
Query: 254 NEDFEVKVSDFGLVRLIS 271
++ ++V+DFG + +
Sbjct: 175 DQQGYIQVTDFGFAKRVK 192
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+L+++ ++V+DFG + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 199 IVYEYMVKGSLNDWLRN-----QAKHCIIACGTARGITFLHHRFQPHIIHRDINASNILL 253
+V EY+ G + LR + A +LH +I+RD+ N+L+
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLI 174
Query: 254 NEDFEVKVSDFGLVRLIS 271
++ ++V+DFG + +
Sbjct: 175 DQQGYIQVTDFGFAKRVK 192
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+L+++ ++V+DFG + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+L+++ ++V+DFG + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+L+++ ++V+DFG + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 202
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+L+++ ++V+DFG + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+L+++ ++V+DFG + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+L+++ ++V+DFG + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+L+++ ++V+DFG + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+L+++ ++V+DFG + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+L+++ ++V+DFG + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+L+++ ++V+DFG + +
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 178
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+L+++ ++V+DFG + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+L+++ ++V+DFG + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+L+++ ++V+DFG + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 222
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 222
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 227
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 222
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 207
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+L+++ ++V+DFG + +
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 185
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 214
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 207
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 241 IIHRDINASNILLNEDFEVKVSDFGLVRLIS 271
+I+RD+ N+L+++ ++V+DFG + +
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 185
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 208
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 31/156 (19%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQA-----KHCIIACGTARGITFLHHRF 237
NI+ L G+ +V E M G L D + Q + + + + +LH +
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ- 140
Query: 238 QPHIIHRDINASNILLNEDFE----VKVSDFGLVR--------LISDCESHTSTDVAGTI 285
++HRD+ SNIL ++ +++ DFG + L++ C +T+ VA +
Sbjct: 141 --GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC--YTANFVAPEV 196
Query: 286 ----GYILLACGGDIYSFSVVLLELVIRKQP--TGP 315
GY G DI+S ++L ++ P GP
Sbjct: 197 LKRQGY---DEGCDIWSLGILLYTMLAGYTPFANGP 229
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 207
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 207
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 208
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 28.5 bits (62), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 180
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 175
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 208
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 208
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 180
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 194
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 195
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 195
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 180
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 194
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 195
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 179
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 28.5 bits (62), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 179
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 28.5 bits (62), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 178
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 28.5 bits (62), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 31/156 (19%)
Query: 183 NIVQLLGYCPVGEKKLIVYEYMVKGSLNDWLRNQA-----KHCIIACGTARGITFLHHRF 237
NI+ L G+ +V E M G L D + Q + + + + +LH +
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ- 140
Query: 238 QPHIIHRDINASNILLNEDFE----VKVSDFGLVR--------LISDCESHTSTDVAGTI 285
++HRD+ SNIL ++ +++ DFG + L++ C +T+ VA +
Sbjct: 141 --GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC--YTANFVAPEV 196
Query: 286 ----GYILLACGGDIYSFSVVLLELVIRKQP--TGP 315
GY G DI+S ++L ++ P GP
Sbjct: 197 LKRQGY---DEGCDIWSLGILLYTMLAGYTPFANGP 229
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 175
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 241 IIHRDINASNILLNEDF-EVKVSDFGLVRLISDCESHTSTDVAGTIGY 287
++HRDI NIL++ + E+K+ DFG L+ D TD GT Y
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVY 175
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.143 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,861,903
Number of Sequences: 62578
Number of extensions: 502557
Number of successful extensions: 2319
Number of sequences better than 100.0: 969
Number of HSP's better than 100.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 150
Number of HSP's that attempted gapping in prelim test: 1032
Number of HSP's gapped (non-prelim): 1102
length of query: 383
length of database: 14,973,337
effective HSP length: 101
effective length of query: 282
effective length of database: 8,652,959
effective search space: 2440134438
effective search space used: 2440134438
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.6 bits)