Your job contains 1 sequence.
>046469
WSLWLLLPHFYYFLGLFFFLNFLHGAYSDDDEDKIVSNVECHYAQARIGECIFDLGDCAY
IKGEGTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDN
PVDCIISKVIVAQIPPKIGLKSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCT
ETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDS
DKSACESLKLNHPEAQVRNEAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRN
SVNSPSITRNSVDSPKVTGNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARI
VDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPL
PGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI
LKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046469
(521 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2117104 - symbol:CMT2 "chromomethylase 2" spec... 887 2.4e-161 2
TAIR|locus:2025787 - symbol:CMT1 "chromomethylase 1" spec... 579 1.8e-112 2
TAIR|locus:2205015 - symbol:CMT3 "chromomethylase 3" spec... 561 1.1e-103 2
UNIPROTKB|Q7Y1I7 - symbol:MET1A "DNA (cytosine-5)-methylt... 248 1.1e-25 2
TAIR|locus:2122313 - symbol:AT4G08990 species:3702 "Arabi... 224 7.4e-24 2
TAIR|locus:2155959 - symbol:MET1 "methyltransferase 1" sp... 235 1.0e-23 2
TAIR|locus:2140892 - symbol:MEE57 "maternal effect embryo... 225 2.0e-23 2
UNIPROTKB|F1S3I5 - symbol:DNMT1 "Cytosine-specific methyl... 224 3.2e-23 3
UNIPROTKB|Q24K09 - symbol:DNMT1 "DNA (cytosine-5)-methylt... 224 2.1e-22 3
UNIPROTKB|Q92072 - symbol:DNMT1 "DNA (cytosine-5)-methylt... 220 2.5e-22 3
MGI|MGI:94912 - symbol:Dnmt1 "DNA methyltransferase (cyto... 216 2.6e-22 3
UNIPROTKB|P26358 - symbol:DNMT1 "DNA (cytosine-5)-methylt... 220 1.2e-21 3
UNIPROTKB|F5GX68 - symbol:DNMT1 "Cytosine-specific methyl... 220 1.2e-21 3
UNIPROTKB|E2RHC6 - symbol:DNMT1 "Cytosine-specific methyl... 224 4.6e-21 3
RGD|620979 - symbol:Dnmt1 "DNA (cytosine-5-)-methyltransf... 219 6.7e-21 3
UNIPROTKB|Q9Z330 - symbol:Dnmt1 "DNA (cytosine-5)-methylt... 219 6.7e-21 3
ZFIN|ZDB-GENE-990714-15 - symbol:dnmt1 "DNA (cytosine-5-)... 221 7.7e-19 2
UNIPROTKB|D4A8Z6 - symbol:Dnmt1 "Cytosine-specific methyl... 117 9.9e-10 3
TIGR_CMR|SPO_1049 - symbol:SPO_1049 "DNA methylase, C-5 c... 152 1.8e-08 2
UNIPROTKB|K7ENW7 - symbol:DNMT1 "DNA (cytosine-5)-methylt... 156 3.3e-08 1
UNIPROTKB|F1NJ02 - symbol:TRDMT1 "Uncharacterized protein... 102 7.4e-05 2
UNIPROTKB|O34939 - symbol:ydiO "Probable BsuMI modificati... 98 7.7e-05 2
MGI|MGI:1923998 - symbol:Pbrm1 "polybromo 1" species:1009... 132 0.00011 1
RGD|1565549 - symbol:Pbrm1 "polybromo 1" species:10116 "R... 132 0.00011 1
FB|FBgn0030854 - symbol:CG8289 species:7227 "Drosophila m... 123 0.00012 1
UNIPROTKB|E2RRR3 - symbol:PBRM1 "Uncharacterized protein"... 131 0.00014 1
UNIPROTKB|E1BNH8 - symbol:E1BNH8 "Uncharacterized protein... 131 0.00014 1
UNIPROTKB|E2RRL7 - symbol:PBRM1 "Uncharacterized protein"... 131 0.00014 1
UNIPROTKB|E2QXE3 - symbol:PARP4 "Uncharacterized protein"... 125 0.00029 1
UNIPROTKB|E7EVG2 - symbol:PBRM1 "Protein polybromo-1" spe... 126 0.00042 1
UNIPROTKB|Q86U86 - symbol:PBRM1 "Protein polybromo-1" spe... 126 0.00049 1
ZFIN|ZDB-GENE-010501-3 - symbol:pbrm1l "polybromo 1, like... 125 0.00061 1
UNIPROTKB|E2RM86 - symbol:TRDMT1 "Uncharacterized protein... 89 0.00072 2
>TAIR|locus:2117104 [details] [associations]
symbol:CMT2 "chromomethylase 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006306 "DNA methylation"
evidence=IEA;ISS] InterPro:IPR000953 InterPro:IPR001025
InterPro:IPR001525 Pfam:PF00145 Pfam:PF01426 PRINTS:PR00105
PROSITE:PS50013 PROSITE:PS51038 SMART:SM00298 SMART:SM00439
Pfam:PF00385 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 GO:GO:0003677 EMBL:AL021711 EMBL:AL161549
GO:GO:0006351 GO:GO:0016568 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 PROSITE:PS00598 eggNOG:COG0270 KO:K00558
GO:GO:0003886 GO:GO:0090116 InterPro:IPR025821 PANTHER:PTHR10629
EMBL:AF383171 EMBL:BX828439 IPI:IPI00539325 PIR:T05039
RefSeq:NP_193637.2 UniGene:At.32846 ProteinModelPortal:Q94F87
SMR:Q94F87 STRING:Q94F87 REBASE:3168 PaxDb:Q94F87 PRIDE:Q94F87
EnsemblPlants:AT4G19020.1 GeneID:827640 KEGG:ath:AT4G19020
TAIR:At4g19020 InParanoid:Q94F87 OMA:NGCQLRR PhylomeDB:Q94F87
Genevestigator:Q94F87 GermOnline:AT4G19020 Uniprot:Q94F87
Length = 1295
Score = 887 (317.3 bits), Expect = 2.4e-161, Sum P(2) = 2.4e-161
Identities = 169/287 (58%), Positives = 214/287 (74%)
Query: 28 SDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIKGEGTQKHIGKILEFFKTTDGEEYFR 87
S+DDEDKIV+NVECHY+QA++ F LGD AYIKGE + H+G+I+EFFKTTDGE YFR
Sbjct: 555 SEDDEDKIVANVECHYSQAKVDGHTFSLGDFAYIKGEEEETHVGQIVEFFKTTDGESYFR 614
Query: 88 VQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPS 147
VQWFYRA DT+M+ A HD++RLFYSTVMNDNPVDC+ISKV V Q+ P++GLK NSI
Sbjct: 615 VQWFYRATDTIMERQATNHDKRRLFYSTVMNDNPVDCLISKVTVLQVSPRVGLKPNSI-K 673
Query: 148 SDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELAL 207
SD+YFDMEYCVEYSTF+TL K + L C + VPT +T + + G EL +
Sbjct: 674 SDYYFDMEYCVEYSTFQTLRNPKTSENKLECCADVVPTESTESILKKKSFSG----ELPV 729
Query: 208 LDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLE 267
LDLYSGCGGMSTGL LGAK+S ++VT+WA+D + +AC+SLKLNHP QVRN+AA DFL+
Sbjct: 730 LDLYSGCGGMSTGLSLGAKISGVDVVTKWAVDQNTAACKSLKLNHPNTQVRNDAAGDFLQ 789
Query: 268 LVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDS 314
L+KEW KLCKR+ N +R + RS++ T+ + S S + + DS
Sbjct: 790 LLKEWDKLCKRYVFNNDQRTDTLRSVNS--TKETSGSSSSSDDDSDS 834
Score = 714 (256.4 bits), Expect = 2.4e-161, Sum P(2) = 2.4e-161
Identities = 135/194 (69%), Positives = 157/194 (80%)
Query: 328 TRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKVHWKGYST 387
T SVNS + T S +S D D EYEV ++VDIC+GD +++GK GL FKVHWKGY +
Sbjct: 811 TLRSVNSTKETSGSSSSSDD-DSDSEEYEVEKLVDICFGDHDKTGKNGLKFKVHWKGYRS 869
Query: 388 SEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDS 447
ED+WE E L NC + I+EFV +GFKSKILPLPG V VICGGPPCQGISGYNR RNVDS
Sbjct: 870 DEDTWELAEELSNCQDAIREFVTSGFKSKILPLPGRVGVICGGPPCQGISGYNRHRNVDS 929
Query: 448 PLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGI 507
PL+DERN+QI++FMDIVE+LKP YVLMENVVDIL+ DK SLGRYALSRLV+M+YQAR GI
Sbjct: 930 PLNDERNQQIIVFMDIVEYLKPSYVLMENVVDILRMDKGSLGRYALSRLVNMRYQARLGI 989
Query: 508 IAAGCYGLPQFRLR 521
+ AGCYGL QFR R
Sbjct: 990 MTAGCYGLSQFRSR 1003
>TAIR|locus:2025787 [details] [associations]
symbol:CMT1 "chromomethylase 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006306 "DNA methylation"
evidence=IEA;ISS] [GO:0009294 "DNA mediated transformation"
evidence=IMP] InterPro:IPR000953 InterPro:IPR001025
InterPro:IPR001525 Pfam:PF00145 Pfam:PF01426 PRINTS:PR00105
PROSITE:PS50013 PROSITE:PS51038 SMART:SM00298 SMART:SM00439
Pfam:PF00385 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0016568
InterPro:IPR016197 SUPFAM:SSF54160 GO:GO:0009294 InterPro:IPR017984
InterPro:IPR023780 InterPro:IPR023779 PRINTS:PR00504
PROSITE:PS00598 EMBL:AC011713 EMBL:AF039364 EMBL:AF039366
EMBL:AF039367 EMBL:AF039368 EMBL:AF039369 EMBL:AF039370
EMBL:AF039371 EMBL:AF039372 EMBL:AF039373 EMBL:U53501
IPI:IPI00531370 IPI:IPI00782822 PIR:H96839 RefSeq:NP_565245.1
UniGene:At.5460 ProteinModelPortal:O49139 SMR:O49139 STRING:O49139
REBASE:3262 PaxDb:O49139 PRIDE:O49139 EnsemblPlants:AT1G80740.1
GeneID:844413 KEGG:ath:AT1G80740 TAIR:At1g80740 eggNOG:COG0270
InParanoid:O49139 KO:K00558 OMA:FPDCYKL PhylomeDB:O49139
ProtClustDB:CLSN2917515 ArrayExpress:O49139 Genevestigator:O49139
GermOnline:AT1G80740 GO:GO:0003886 GO:GO:0090116 InterPro:IPR025821
PANTHER:PTHR10629 Uniprot:O49139
Length = 791
Score = 579 (208.9 bits), Expect = 1.8e-112, Sum P(2) = 1.8e-112
Identities = 98/173 (56%), Positives = 136/173 (78%)
Query: 349 DIPPGEYEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEF 408
++ PGE+EV + + I +GDP +G++ L V WKGY++S D+WEP GL NC E++KE+
Sbjct: 333 ELEPGEFEVEKFLGIMFGDPQGTGEKTLQLMVRWKGYNSSYDTWEPYSGLGNCKEKLKEY 392
Query: 409 VRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLK 468
V +GFKS +LPLPG V +CGGPPCQGISGYNR+RN ++PL+D++N+Q+++F+DI++FLK
Sbjct: 393 VIDGFKSHLLPLPGTVYTVCGGPPCQGISGYNRYRNNEAPLEDQKNQQLLVFLDIIDFLK 452
Query: 469 PKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
P YVLMENVVD+L+F K L R+A++ V M YQ R G++AAG YGLPQ R R
Sbjct: 453 PNYVLMENVVDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGSYGLPQLRNR 505
Score = 551 (199.0 bits), Expect = 1.8e-112, Sum P(2) = 1.8e-112
Identities = 111/255 (43%), Positives = 161/255 (63%)
Query: 31 DEDKIVSNVECHYAQARIGECIFDLGDCAYIKG-EGTQKHIGKILEFFKTTDGEEYFRVQ 89
++++I+ +CH+ +A + + +L D Y+ G G K I K++E F+ DG Y R +
Sbjct: 59 EDEEIIKQAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGVPYCRFR 118
Query: 90 WFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIP-PKIG--LKSNSIP 146
W+YR EDT+++ + KR+F S NDNP+ CI SKV +A++P PKI ++ IP
Sbjct: 119 WYYRPEDTLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRIEQRVIP 178
Query: 147 SSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELA 206
D+Y+DM+Y V Y F + G SL S + FEN+ HK E
Sbjct: 179 PCDYYYDMKYEVPYLNFTSADDGSDASSSLSS-------DSALNCFENL-----HKDEKF 226
Query: 207 LLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFL 266
LLDLYSGCG MSTG C+GA +S L+T+W++D +K AC+SLKLNHPE +VRNEAAEDFL
Sbjct: 227 LLDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNEAAEDFL 286
Query: 267 ELVKEWQKLCKRFAV 281
L+KEW++LC++F++
Sbjct: 287 ALLKEWKRLCEKFSL 301
>TAIR|locus:2205015 [details] [associations]
symbol:CMT3 "chromomethylase 3" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006306 "DNA methylation"
evidence=IEA;RCA;IMP] [GO:0006342 "chromatin silencing"
evidence=IGI;RCA] [GO:0010425 "DNA methylation on cytosine within a
CNG sequence" evidence=IMP] [GO:0045814 "negative regulation of
gene expression, epigenetic" evidence=IGI] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IMP] [GO:0010069
"zygote asymmetric cytokinesis in embryo sac" evidence=IMP]
[GO:0051567 "histone H3-K9 methylation" evidence=IGI;RCA]
[GO:0006260 "DNA replication" evidence=RCA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] [GO:0006270 "DNA
replication initiation" evidence=RCA] [GO:0006275 "regulation of
DNA replication" evidence=RCA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0016458 "gene silencing" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0031048 "chromatin
silencing by small RNA" evidence=RCA] [GO:0034968 "histone lysine
methylation" evidence=RCA] [GO:0051726 "regulation of cell cycle"
evidence=RCA] InterPro:IPR000953 InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS50013 PROSITE:PS51038
SMART:SM00298 SMART:SM00439 Pfam:PF00385 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0006351
GO:GO:0006342 GO:GO:0051567 InterPro:IPR016197 SUPFAM:SSF54160
EMBL:AC013289 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
eggNOG:COG0270 KO:K00558 GO:GO:0003886 InterPro:IPR025821
PANTHER:PTHR10629 TIGRFAMs:TIGR00675 EMBL:AF383170 EMBL:AF364174
IPI:IPI00534552 PIR:G96719 RefSeq:NP_177135.1 UniGene:At.35376
ProteinModelPortal:Q94F88 SMR:Q94F88 STRING:Q94F88 REBASE:4853
PaxDb:Q94F88 PRIDE:Q94F88 EnsemblPlants:AT1G69770.1 GeneID:843313
KEGG:ath:AT1G69770 TAIR:At1g69770 HOGENOM:HOG000082844
InParanoid:Q94F88 OMA:EWEKLCI PhylomeDB:Q94F88
ProtClustDB:CLSN2913566 Genevestigator:Q94F88 GermOnline:AT1G69770
GO:GO:0010425 GO:GO:0010069 Uniprot:Q94F88
Length = 839
Score = 561 (202.5 bits), Expect = 1.1e-103, Sum P(2) = 1.1e-103
Identities = 104/170 (61%), Positives = 133/170 (78%)
Query: 353 GE-YEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRN 411
GE + V +IV I +G P + KRGL KV W Y S D+WEPIEGL NC +I+EFV+
Sbjct: 379 GEVFTVDKIVGISFGVPKKLLKRGLYLKVRWLNYDDSHDTWEPIEGLSNCRGKIEEFVKL 438
Query: 412 GFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKY 471
G+KS ILPLPG VDV+CGGPPCQGISG+NRFRN+ PL+D++N+Q++++M+IVE+LKPK+
Sbjct: 439 GYKSGILPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIVEYLKPKF 498
Query: 472 VLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
VLMENVVD+LK K L R+A+ RL+ M YQ R G++AAG YGL QFRLR
Sbjct: 499 VLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAYGLAQFRLR 548
Score = 493 (178.6 bits), Expect = 1.1e-103, Sum P(2) = 1.1e-103
Identities = 111/262 (42%), Positives = 154/262 (58%)
Query: 30 DDEDKIVSNVECHYAQARIGEC-IFDLGDCAYIK-GEGTQKHIGKILEFFKTTDGEEYFR 87
DDE + CHY +A + E I++L D AY++ GEG I KI+E F+ +G+ YF
Sbjct: 86 DDEKVEIIRARCHYRRAIVDERQIYELNDDAYVQSGEGKDPFICKIIEMFEGANGKLYFT 145
Query: 88 VQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPS 147
+WFYR DTVMKE +KR+F+S + + N + + K+ + IP K +IP+
Sbjct: 146 ARWFYRPSDTVMKEFEILIKKKRVFFSEIQDTNELGLLEKKLNILMIPLNENTKE-TIPA 204
Query: 148 S---DFYFDMEYCVEYSTFRTLLTGKIHDLS----LPSCTETVP-TTATSTFFENMPNHG 199
+ DF+ DM Y + Y TF + + +S + S T+ A S E
Sbjct: 205 TENCDFFCDMNYFLPYDTFEAIQQETMMAISESSTISSDTDIREGAAAISEIGECSQETE 264
Query: 200 PHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRN 259
HK + LLDLYSGCG MSTGLC+GA+LS NLVT+WA+D + AC+SL+ NHPE VRN
Sbjct: 265 GHK-KATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHPETNVRN 323
Query: 260 EAAEDFLELVKEWQKLCKRFAV 281
AEDFL L+KEW+KLC F++
Sbjct: 324 MTAEDFLFLLKEWEKLCIHFSL 345
>UNIPROTKB|Q7Y1I7 [details] [associations]
symbol:MET1A "DNA (cytosine-5)-methyltransferase 1A"
species:39947 "Oryza sativa Japonica Group" [GO:0010216
"maintenance of DNA methylation" evidence=ISS] [GO:0010424 "DNA
methylation on cytosine within a CG sequence" evidence=ISS]
[GO:0016458 "gene silencing" evidence=IMP] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR017198 InterPro:IPR018117
Pfam:PF00145 Pfam:PF01426 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 SMART:SM00439
GO:GO:0005634 GO:GO:0003677 GO:GO:0016458 EMBL:CM000140
eggNOG:COG0270 GO:GO:0003886 PANTHER:PTHR10629 TIGRFAMs:TIGR00675
GO:GO:0010216 EMBL:AF462029 EMBL:AB362510 EMBL:AC093713
EMBL:AK108034 ProteinModelPortal:Q7Y1I7 STRING:Q7Y1I7 REBASE:7658
Gramene:Q7Y1I7 GO:GO:0010424 InterPro:IPR022702 Pfam:PF12047
Uniprot:Q7Y1I7
Length = 1527
Score = 248 (92.4 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 49/108 (45%), Positives = 67/108 (62%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
K K LP+PG+V+ I GGPPCQG SG NRF SP + I+ F+ E+ +P++ L
Sbjct: 1178 KIKNLPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFL 1235
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F+K R L+ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1236 LENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKR 1283
Score = 129 (50.5 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 52/195 (26%), Positives = 90/195 (46%)
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
+V+ FYR +D + A D + ++YS + PV I K ++ K L ++ +P
Sbjct: 970 KVRRFYRPDD-ISSTKAYSSDIREVYYSEDIISVPVVMIEGK---CEVRLKDDLPNSDLP 1025
Query: 147 SS-DFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFE---------NMP 196
+ + F EY Y L ++ L + T VP + + + + P
Sbjct: 1026 AVVEHVFCCEYL--YDPANGALKQLPPNVRLVTLTRKVPASKKNKGKQICDIELGGSDKP 1083
Query: 197 NHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQ 256
G + LA LD+++GCGG+S GL LS +T+WA++ ++ A ++ NHPEA
Sbjct: 1084 KDGQSENCLATLDIFAGCGGLSEGLQRSG-LS----LTKWAIEYEEPAGDAFGENHPEAA 1138
Query: 257 VRNEAAEDFLELVKE 271
V E L+ + +
Sbjct: 1139 VFVENCNVILKAIMD 1153
>TAIR|locus:2122313 [details] [associations]
symbol:AT4G08990 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006306 "DNA
methylation" evidence=IEA;ISS] [GO:0090116 "C-5 methylation of
cytosine" evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR017198 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS00095
PROSITE:PS51038 SMART:SM00439 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 EMBL:AL161513
eggNOG:COG0270 KO:K00558 GO:GO:0003886 PANTHER:PTHR10629
TIGRFAMs:TIGR00675 InterPro:IPR022702 Pfam:PF12047
HOGENOM:HOG000083447 ProtClustDB:CLSN2685944 IPI:IPI00549079
PIR:G85090 RefSeq:NP_192638.1 UniGene:At.54221 HSSP:P20589
ProteinModelPortal:Q9M0S8 SMR:Q9M0S8 STRING:Q9M0S8 REBASE:2839
PaxDb:Q9M0S8 PRIDE:Q9M0S8 EnsemblPlants:AT4G08990.1 GeneID:826477
KEGG:ath:AT4G08990 TAIR:At4g08990 InParanoid:Q9M0S8 OMA:YRISMER
PhylomeDB:Q9M0S8 ArrayExpress:Q9M0S8 Genevestigator:Q9M0S8
Uniprot:Q9M0S8
Length = 1512
Score = 224 (83.9 bits), Expect = 7.4e-24, Sum P(2) = 7.4e-24
Identities = 44/104 (42%), Positives = 61/104 (58%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG D I GGPPCQG SG NRF D + I+ F+ ++ +PKY L+ENV
Sbjct: 1161 LPLPGQADFISGGPPCQGFSGMNRFS--DGSWSKVQCEMILAFLSFADYFRPKYFLLENV 1218
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ ++K + ++ L+ + YQ RFGI+ AG YG+ Q R R
Sbjct: 1219 KKFVTYNKGRTFQLTMASLLEIGYQVRFGILEAGTYGVSQPRKR 1262
Score = 137 (53.3 bits), Expect = 7.4e-24, Sum P(2) = 7.4e-24
Identities = 54/201 (26%), Positives = 88/201 (43%)
Query: 78 KTTDGEEYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPK 137
K ++ ++ FYR ED + +E A D + L+YS P + + K V +
Sbjct: 938 KASNASFQVKLTRFYRPED-ISEEKAYASDIQELYYSHDTYILPPEALQGKCEVRKKNDM 996
Query: 138 IGLKSNSIPSSDFY----FDME--YCVEYSTFRTLLTGKIHDLSLPSCTETVPT-TATST 190
+ I F+ +D Y ++ L I D +L + T TS+
Sbjct: 997 PLCREYPILDHIFFCEVFYDSSTGYLKQFPANMKLKFSTIKDETLLREKKGKGVETGTSS 1056
Query: 191 FFENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKL 250
P+ P + LA LD+++GCGG+S GL K +N T+WA++ ++ A + K
Sbjct: 1057 GILMKPDEVPKEMRLATLDIFAGCGGLSHGL---EKAGVSN--TKWAIEYEEPAGHAFKQ 1111
Query: 251 NHPEAQVRNEAAEDFLELVKE 271
NHPEA V + L + E
Sbjct: 1112 NHPEATVFVDNCNVILRAIME 1132
>TAIR|locus:2155959 [details] [associations]
symbol:MET1 "methyltransferase 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006306 "DNA methylation" evidence=IEA;RCA] [GO:0090116 "C-5
methylation of cytosine" evidence=IEA] [GO:0010069 "zygote
asymmetric cytokinesis in embryo sac" evidence=IMP] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IMP]
[GO:0010216 "maintenance of DNA methylation" evidence=IMP]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0006260 "DNA replication" evidence=RCA]
[GO:0006261 "DNA-dependent DNA replication" evidence=RCA]
[GO:0006333 "chromatin assembly or disassembly" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0016458 "gene silencing"
evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008168
"methyltransferase activity" evidence=TAS] [GO:0009910 "negative
regulation of flower development" evidence=IMP] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR017198 InterPro:IPR018117
Pfam:PF00145 Pfam:PF01426 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 SMART:SM00439
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0016568 GO:GO:0009910 GO:GO:0008168 GO:GO:0006349
EMBL:AB016872 GO:GO:0009294 eggNOG:COG0270 KO:K00558 GO:GO:0003886
PANTHER:PTHR10629 TIGRFAMs:TIGR00675 GO:GO:0010069 GO:GO:0010216
GO:GO:0010424 InterPro:IPR022702 Pfam:PF12047 EMBL:L10692
EMBL:AY699012 EMBL:AK229013 EMBL:AK230148 IPI:IPI00536256
PIR:S59604 RefSeq:NP_199727.1 UniGene:At.20294
ProteinModelPortal:P34881 SMR:P34881 STRING:P34881 REBASE:11752
PaxDb:P34881 PRIDE:P34881 EnsemblPlants:AT5G49160.1 GeneID:834975
KEGG:ath:AT5G49160 TAIR:At5g49160 HOGENOM:HOG000083447
InParanoid:P34881 OMA:IWISTEL PhylomeDB:P34881
ProtClustDB:CLSN2685944 Genevestigator:P34881 GermOnline:AT5G49160
Uniprot:P34881
Length = 1534
Score = 235 (87.8 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 47/104 (45%), Positives = 62/104 (59%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +P+Y L+ENV
Sbjct: 1183 LPLPGQVDFINGGPPCQGFSGMNRFNQ--SSWSKVQCEMILAFLSFADYFRPRYFLLENV 1240
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ F+K + L+ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1241 RTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQSRKR 1284
Score = 124 (48.7 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 49/194 (25%), Positives = 85/194 (43%)
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLK-SNSI 145
+V+ FYR ED V E A D + L++S P + K ++ K + S
Sbjct: 970 KVRRFYRPED-VSAEKAYASDIQELYFSQDTVVLPPGALEGK---CEVRKKSDMPLSREY 1025
Query: 146 PSSD--FYFDMEYCVEYSTFRTL---LTGKIHDLSLPSCTETVPTTATSTFFEN---MPN 197
P SD F+ D+ + + + L + K + + + E+ P
Sbjct: 1026 PISDHIFFCDLFFDTSKGSLKQLPANMKPKFSTIKDDTLLRKKKGKGVESEIESEIVKPV 1085
Query: 198 HGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
P + LA LD+++GCGG+S GL K ++ +WA++ ++ A ++ K NHPE+ V
Sbjct: 1086 EPPKEIRLATLDIFAGCGGLSHGL---KKAGVSD--AKWAIEYEEPAGQAFKQNHPESTV 1140
Query: 258 RNEAAEDFLELVKE 271
+ L + E
Sbjct: 1141 FVDNCNVILRAIME 1154
Score = 40 (19.1 bits), Expect = 2.7e-14, Sum P(3) = 2.7e-14
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 277 KRFAVNIVERENKQRSMSQRVTRNSVNSPS 306
+R+A+ + + EN+ +SM Q +S S S
Sbjct: 314 RRYAILLQDEENR-KSMQQPRKNSSSGSAS 342
Score = 37 (18.1 bits), Expect = 2.7e-14, Sum P(3) = 2.7e-14
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 389 EDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDV 424
ED E EG N E ++E NG +P P +V
Sbjct: 659 EDEVEE-EG-GNGEEEVEEEGENGLTEDTVPEPVEV 692
Score = 37 (18.1 bits), Expect = 5.5e-14, Sum P(3) = 5.5e-14
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 234 TRWALDSDKSACESLKLNHPEA 255
T+W + K + + L LN P A
Sbjct: 593 TKWIIKKKKISLKELNLN-PRA 613
>TAIR|locus:2140892 [details] [associations]
symbol:MEE57 "maternal effect embryo arrest 57"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006306 "DNA methylation" evidence=IEA;ISS] [GO:0090116 "C-5
methylation of cytosine" evidence=IEA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=IMP] [GO:0006333
"chromatin assembly or disassembly" evidence=RCA]
InterPro:IPR001025 InterPro:IPR001525 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 PIRSF:PIRSF037404
PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038
SMART:SM00439 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0009793 EMBL:AL049656 EMBL:AL161537
eggNOG:COG0270 KO:K00558 GO:GO:0003886 PANTHER:PTHR10629
HSSP:O14717 TIGRFAMs:TIGR00675 InterPro:IPR022702 Pfam:PF12047
HOGENOM:HOG000083447 ProtClustDB:CLSN2685944 REBASE:2839
IPI:IPI00536439 PIR:T06663 RefSeq:NP_193097.1 UniGene:At.54310
ProteinModelPortal:Q9T0I1 SMR:Q9T0I1 STRING:Q9T0I1 PRIDE:Q9T0I1
EnsemblPlants:AT4G13610.1 GeneID:826994 KEGG:ath:AT4G13610
TAIR:At4g13610 InParanoid:Q9T0I1 OMA:ENWTISG PhylomeDB:Q9T0I1
ArrayExpress:Q9T0I1 Genevestigator:Q9T0I1 Uniprot:Q9T0I1
Length = 1404
Score = 225 (84.3 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 44/104 (42%), Positives = 61/104 (58%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG S NRF D + + I+ F+ ++ +PKY L+ENV
Sbjct: 1070 LPLPGQVDFISGGPPCQGFSRLNRFS--DGSWSKNQCQMILAFLSFADYFRPKYFLLENV 1127
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ F++ ++ L+ M YQ RFG++ AG YG+ Q R R
Sbjct: 1128 KTFVSFNEGHTFHLTVASLLEMGYQVRFGLLEAGAYGISQPRKR 1171
Score = 131 (51.2 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 51/195 (26%), Positives = 88/195 (45%)
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
+V+ FYR +D V E A D + ++YS P + I K V + + I
Sbjct: 850 KVRRFYRPDD-VSAEEAYASDIQEVYYSEDTYILPPEAIKGKCEVMKKTDMPLCREYPIL 908
Query: 147 SSDFYFDMEY-----CVEYSTFRTLLT-GKIHDLSLPSCTETVPTTATSTFFENMPNHGP 200
++ D Y C++ + +L I D +L E T ++ + P+ P
Sbjct: 909 DHVYFCDRFYDSSNGCLKKLPYNMMLKFSTIKDDTL--LREKKTETGSAMLLK--PDEVP 964
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNE 260
LA LD+++GCGG+S GL K ++ T+WA++ ++ A ++ K NHP+ V +
Sbjct: 965 KGKRLATLDIFAGCGGLSYGL---EKAGVSD--TKWAIEYEEPAAQAFKQNHPKTTVFVD 1019
Query: 261 AAEDFLELVKEWQKL 275
L + W +L
Sbjct: 1020 NCNVILRI--SWLRL 1032
>UNIPROTKB|F1S3I5 [details] [associations]
symbol:DNMT1 "Cytosine-specific methyltransferase"
species:9823 "Sus scrofa" [GO:0071230 "cellular response to amino
acid stimulus" evidence=IEA] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0016458 "gene silencing" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=IEA] [GO:0010216
"maintenance of DNA methylation" evidence=IEA] [GO:0008327
"methyl-CpG binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
GO:GO:0005634 GO:GO:0045892 GO:GO:0008270 GO:GO:0003723
GO:GO:0042127 GO:GO:0010628 GO:GO:0005721 GO:GO:0071230
GO:GO:0016458 GO:GO:0005657 GO:GO:0051573 GO:GO:0051571
GO:GO:0003886 PANTHER:PTHR10629 GO:GO:0010216 InterPro:IPR022702
Pfam:PF12047 GeneTree:ENSGT00390000005100 OMA:SENWAME GO:GO:0008327
EMBL:CU462940 Ensembl:ENSSSCT00000014923 Uniprot:F1S3I5
Length = 1611
Score = 224 (83.9 bits), Expect = 3.2e-23, Sum P(3) = 3.2e-23
Identities = 43/104 (41%), Positives = 64/104 (61%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P+Y L+ENV
Sbjct: 1207 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFLLENV 1264
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1265 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1308
Score = 90 (36.7 bits), Expect = 3.2e-23, Sum P(3) = 3.2e-23
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
+L LD++SGCGG+S G A +S T WA++ A ++ +LN+P + V E
Sbjct: 1134 KLRTLDVFSGCGGLSEGFHQ-AGIS----ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCN 1188
Query: 264 DFLELV 269
L+LV
Sbjct: 1189 VLLKLV 1194
Score = 87 (35.7 bits), Expect = 3.2e-23, Sum P(3) = 3.2e-23
Identities = 30/136 (22%), Positives = 57/136 (41%)
Query: 42 HYAQARIGECIFDLGDCAYIKGEGTQK--HIGKILEFFKTTDGEEYFRVQWFYRAEDTVM 99
+Y + I ++GDC + + + K ++ ++ ++ + + F WF DTV+
Sbjct: 742 YYKKVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGIDTVL 801
Query: 100 KEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKI------GLKSNSIPSSD---- 149
+D LF D + I SKV V PP G+ ++ S D
Sbjct: 802 GATSD---PLELFLVDECEDMQLSYIHSKVKVIYKPPSENWALEGGMDPEALMSKDDGKT 858
Query: 150 FYFDMEYCVEYSTFRT 165
+++ + Y EY+ F +
Sbjct: 859 YFYQLWYDQEYARFES 874
Score = 57 (25.1 bits), Expect = 3.9e-20, Sum P(3) = 3.9e-20
Identities = 22/67 (32%), Positives = 31/67 (46%)
Query: 60 YIKGEGTQK----HIGKILEFF--KTTDGEEY-----FRVQWFYRAEDTVMKEAADFH-D 107
YIKG IG+I E F K ++G+ R+ FYR E+T A +H D
Sbjct: 975 YIKGSNLDAPEPYRIGRIKEIFCTKKSNGKPNETDIKIRLNKFYRPENTHKSTPASYHAD 1034
Query: 108 RKRLFYS 114
L++S
Sbjct: 1035 INLLYWS 1041
Score = 44 (20.5 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 9/37 (24%), Positives = 15/37 (40%)
Query: 309 RNSVDSPKVTGNSVDSPRVTRSSVNSPRVTRNSVNSP 345
R+ D + SPR+TR + +T + P
Sbjct: 140 RSKSDGEAKSAEVSSSPRITRQTTRQTTITSHFTRGP 176
Score = 41 (19.5 bits), Expect = 8.6e-14, Sum P(2) = 8.6e-14
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 285 ERENKQRSMSQRVTRNSVNSPSITRNSVDSP 315
E ++ + S S R+TR + +IT + P
Sbjct: 146 EAKSAEVSSSPRITRQTTRQTTITSHFTRGP 176
>UNIPROTKB|Q24K09 [details] [associations]
symbol:DNMT1 "DNA (cytosine-5)-methyltransferase 1"
species:9913 "Bos taurus" [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=ISS] [GO:0010216
"maintenance of DNA methylation" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0071230 "cellular response to amino
acid stimulus" evidence=IEA] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0016458 "gene silencing" evidence=IEA] [GO:0010628 "positive
regulation of gene expression" evidence=IEA] [GO:0008327
"methyl-CpG binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
GO:GO:0005634 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0003723 GO:GO:0042127
GO:GO:0010628 GO:GO:0005721 GO:GO:0071230 GO:GO:0016458
GO:GO:0005657 GO:GO:0051573 GO:GO:0051571 eggNOG:COG0270 KO:K00558
GO:GO:0003886 PANTHER:PTHR10629 GO:GO:0010216 InterPro:IPR022702
Pfam:PF12047 EMBL:AY244709 EMBL:AY173048 EMBL:BC114063
IPI:IPI00711805 RefSeq:NP_872592.2 UniGene:Bt.108052
UniGene:Bt.48560 ProteinModelPortal:Q24K09 STRING:Q24K09
REBASE:7406 PRIDE:Q24K09 Ensembl:ENSBTAT00000003549 GeneID:281119
KEGG:bta:281119 CTD:1786 GeneTree:ENSGT00390000005100
HOGENOM:HOG000082497 HOVERGEN:HBG051384 InParanoid:Q24K09
OMA:SENWAME OrthoDB:EOG4T1HKN NextBio:20805188 GO:GO:0008327
Uniprot:Q24K09
Length = 1611
Score = 224 (83.9 bits), Expect = 2.1e-22, Sum P(3) = 2.1e-22
Identities = 43/104 (41%), Positives = 64/104 (61%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P+Y L+ENV
Sbjct: 1208 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFLLENV 1265
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1266 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1309
Score = 90 (36.7 bits), Expect = 2.1e-22, Sum P(3) = 2.1e-22
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
+L LD++SGCGG+S G A +S T WA++ A ++ +LN+P + V E
Sbjct: 1135 KLRTLDVFSGCGGLSEGFHQ-AGIS----ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCN 1189
Query: 264 DFLELV 269
L+LV
Sbjct: 1190 VLLKLV 1195
Score = 79 (32.9 bits), Expect = 2.1e-22, Sum P(3) = 2.1e-22
Identities = 27/136 (19%), Positives = 59/136 (43%)
Query: 42 HYAQARIGECIFDLGDCAYIKGEGTQK--HIGKILEFFKTTDGEEYFRVQWFYRAEDTVM 99
+Y + I ++GDC + + + K ++ ++ ++ + + F WF DTV+
Sbjct: 743 YYKKVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDTVL 802
Query: 100 KEAADFHDRKRLFYSTVMNDNPVDCIISKV-IVAQIPPKI-----GLKSNSIPSSD---- 149
+D LF D + I SKV ++ + P + G+ ++ S D
Sbjct: 803 GATSD---PLELFLVDECEDMQLSYIHSKVQVIYKAPSENWAMEGGVDPEALMSEDDGKT 859
Query: 150 FYFDMEYCVEYSTFRT 165
+++ + Y +Y+ F +
Sbjct: 860 YFYQLWYDQDYARFES 875
Score = 59 (25.8 bits), Expect = 2.4e-20, Sum P(3) = 2.4e-20
Identities = 23/67 (34%), Positives = 30/67 (44%)
Query: 60 YIKGEGTQK----HIGKILEFF--KTTDGEEY-----FRVQWFYRAEDTVMKEAADFH-D 107
YIKG IG+I E F K ++G RV FYR E+T A +H D
Sbjct: 976 YIKGSNLDAPEPYRIGRIKEIFCSKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHAD 1035
Query: 108 RKRLFYS 114
L++S
Sbjct: 1036 INLLYWS 1042
Score = 41 (19.5 bits), Expect = 8.6e-14, Sum P(2) = 8.6e-14
Identities = 15/66 (22%), Positives = 24/66 (36%)
Query: 309 RNSVDSPKVTGNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDP 368
R S + SPR+TR + +T + P P E E + D +
Sbjct: 139 RRSKSDGETKSEVSSSPRITRKTTRQTTITSHFPRGPAKRK-PEEEPEKVKSDDSVDEEK 197
Query: 369 NESGKR 374
++ KR
Sbjct: 198 DQEEKR 203
>UNIPROTKB|Q92072 [details] [associations]
symbol:DNMT1 "DNA (cytosine-5)-methyltransferase 1"
species:9031 "Gallus gallus" [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003886 "DNA (cytosine-5-)-methyltransferase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR002857 InterPro:IPR010506
InterPro:IPR017198 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
Pfam:PF02008 Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058
SMART:SM00439 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 KO:K00558 GO:GO:0003886
PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047 CTD:1786
HOVERGEN:HBG051384 EMBL:D43920 IPI:IPI00588424 PIR:JC4172
RefSeq:NP_996835.1 UniGene:Gga.1206 ProteinModelPortal:Q92072
REBASE:3020 PRIDE:Q92072 GeneID:396011 KEGG:gga:396011
NextBio:20816074 Uniprot:Q92072
Length = 1537
Score = 220 (82.5 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 42/104 (40%), Positives = 64/104 (61%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1126 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1183
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1184 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1227
Score = 94 (38.1 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
+L LD++SGCGG+S G A +S T WA++ + A ++ +LN+P V E
Sbjct: 1053 KLRTLDVFSGCGGLSEGFHQ-AGVS----ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCN 1107
Query: 264 DFLELVKEWQK 274
L+LV +K
Sbjct: 1108 VLLKLVMSGEK 1118
Score = 78 (32.5 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 32/135 (23%), Positives = 53/135 (39%)
Query: 43 YAQARIGECIFDLGDCAYIKGEGTQK--HIGKILEFFKTTDGEEYFRVQWFYRAEDTVMK 100
Y + I ++GDC + + K ++ ++ ++ + G+ F WF DTV+
Sbjct: 659 YQRVCIDSETLEVGDCVSVSPDDPTKPLYLARVTAMWEDSSGQ-MFHAHWFCPGSDTVLG 717
Query: 101 EAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKI------GLKSN-SIPSSD---F 150
+D LF D + I KV V PP GL + D +
Sbjct: 718 ATSD---PLELFLVDECEDMQLSYIHGKVNVIYKPPSENWAMEGGLDMEIKMVEDDGRTY 774
Query: 151 YFDMEYCVEYSTFRT 165
++ M Y EY+ F T
Sbjct: 775 FYQMWYDQEYARFET 789
Score = 55 (24.4 bits), Expect = 5.7e-20, Sum P(3) = 5.7e-20
Identities = 23/80 (28%), Positives = 34/80 (42%)
Query: 60 YIKGEGTQK----HIGKILEFF-------KTTDGEEYFRVQWFYRAEDTVMKEAADFH-D 107
YIKG +G+I E F K + + R+ FYR E+T A +H D
Sbjct: 890 YIKGSNLDAPDPYRVGRIKEIFCHIRTNGKPNEADIKLRIWKFYRPENTHKSMKATYHAD 949
Query: 108 RKRLFYSTVMNDNPVD-CII 126
L++S + VD C +
Sbjct: 950 INLLYWSD--EETTVDFCAV 967
Score = 46 (21.3 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 287 ENKQRSMSQRVTRNSVNSPSI 307
E+K+ S RVTR+S P+I
Sbjct: 167 ESKKSPASSRVTRSSGRQPTI 187
Score = 38 (18.4 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 290 QRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPRVT-RSSVNSPRVTRNSVNSPRD 347
+RS S ++ S S +TR+S P + SV S T R S + V++ +D
Sbjct: 160 RRSRSNGESKKSPASSRVTRSSGRQPTIL--SVFSKGSTKRKSEEVNGAVKPEVSAEKD 216
>MGI|MGI:94912 [details] [associations]
symbol:Dnmt1 "DNA methyltransferase (cytosine-5) 1"
species:10090 "Mus musculus" [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO;IDA]
[GO:0003690 "double-stranded DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=IDA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005657
"replication fork" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006306 "DNA methylation" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IDA] [GO:0008270
"zinc ion binding" evidence=IDA] [GO:0008327 "methyl-CpG binding"
evidence=ISO;IDA] [GO:0009008 "DNA-methyltransferase activity"
evidence=ISO] [GO:0010216 "maintenance of DNA methylation"
evidence=ISO;IMP] [GO:0010424 "DNA methylation on cytosine within a
CG sequence" evidence=ISO] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0010628 "positive regulation of gene
expression" evidence=ISO] [GO:0016458 "gene silencing"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0032259
"methylation" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IGI] [GO:0042826 "histone deacetylase
binding" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045322 "unmethylated CpG binding" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0046498 "S-adenosylhomocysteine metabolic
process" evidence=ISO] [GO:0046499 "S-adenosylmethioninamine
metabolic process" evidence=ISO] [GO:0046500 "S-adenosylmethionine
metabolic process" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISO] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=ISO] [GO:0051718 "DNA
(cytosine-5-)-methyltransferase activity, acting on CpG substrates"
evidence=ISO] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IDA] [GO:0090116 "C-5 methylation of cytosine"
evidence=IDA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
MGI:MGI:94912 GO:GO:0005634 GO:GO:0005737 GO:GO:0045892
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0016568
GO:GO:0003723 GO:GO:0042127 GO:GO:0010628 GO:GO:0005721
GO:GO:0071230 GO:GO:0016458 GO:GO:0005657 GO:GO:0051573
GO:GO:0051571 eggNOG:COG0270 KO:K00558 GO:GO:0003886
PANTHER:PTHR10629 GO:GO:0010216 InterPro:IPR022702 Pfam:PF12047
BRENDA:2.1.1.37 CTD:1786 GeneTree:ENSGT00390000005100
HOVERGEN:HBG051384 OMA:SENWAME OrthoDB:EOG4T1HKN GO:GO:0008327
ChiTaRS:DNMT1 EMBL:X14805 EMBL:AF175432 EMBL:AF162282 EMBL:AF175431
EMBL:AF175412 EMBL:AF175413 EMBL:AF175414 EMBL:AF244089
EMBL:AF244090 EMBL:AF175416 EMBL:AF175417 EMBL:AF175418
EMBL:AF175419 EMBL:AF175420 EMBL:AF175421 EMBL:AF175422
EMBL:AF175423 EMBL:AF234317 EMBL:AF175424 EMBL:AF175425
EMBL:AF175426 EMBL:AF234318 EMBL:AF175427 EMBL:AF175428
EMBL:AF175429 EMBL:AF175430 EMBL:BC048148 EMBL:AF036007
EMBL:AF036008 EMBL:U70051 EMBL:AK013247 IPI:IPI00474974
IPI:IPI00990173 PIR:S01845 RefSeq:NP_001186360.2
RefSeq:NP_001186361.1 RefSeq:NP_001186362.1 RefSeq:NP_034196.5
UniGene:Mm.128580 PDB:3AV4 PDB:3AV5 PDB:3AV6 PDB:3PT6 PDB:3PT9
PDB:4DA4 PDBsum:3AV4 PDBsum:3AV5 PDBsum:3AV6 PDBsum:3PT6
PDBsum:3PT9 PDBsum:4DA4 ProteinModelPortal:P13864 SMR:P13864
IntAct:P13864 STRING:P13864 REBASE:2844 PhosphoSite:P13864
PaxDb:P13864 PRIDE:P13864 Ensembl:ENSMUST00000004202
Ensembl:ENSMUST00000178110 GeneID:13433 KEGG:mmu:13433
UCSC:uc009ojo.2 UCSC:uc009ojq.2 InParanoid:P13864
EvolutionaryTrace:P13864 NextBio:283859 Bgee:P13864
CleanEx:MM_DNMT1 Genevestigator:P13864
GermOnline:ENSMUSG00000004099 Uniprot:P13864
Length = 1620
Score = 216 (81.1 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
Identities = 41/104 (39%), Positives = 64/104 (61%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1214 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1271
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1272 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1315
Score = 89 (36.4 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
+L LD++SGCGG+S G A +S T WA++ A ++ +LN+P V E
Sbjct: 1141 KLRTLDVFSGCGGLSEGFHQ-AGIS----ETLWAIEMWDPAAQAFRLNNPGTTVFTEDCN 1195
Query: 264 DFLELV 269
L+LV
Sbjct: 1196 VLLKLV 1201
Score = 88 (36.0 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
Identities = 32/145 (22%), Positives = 65/145 (44%)
Query: 34 KIVSNVECHYAQARIGECIFDLGDCAYIKGEGTQK--HIGKILEFFKTTDGEEYFRVQWF 91
KI N +Y + I E + ++GDC + + + K ++ ++ ++ +G+ F WF
Sbjct: 742 KIEEN-RTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDKNGQMMFHAHWF 800
Query: 92 YRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKV-IVAQIPPKI-----GLK-SNS 144
DTV+ +D LF + + I SKV ++ + P + G +
Sbjct: 801 CAGTDTVLGATSD---PLELFLVGECENMQLSYIHSKVKVIYKAPSENWAMEGGTDPETT 857
Query: 145 IPSSD----FYFDMEYCVEYSTFRT 165
+P ++ ++F + Y EY+ F +
Sbjct: 858 LPGAEDGKTYFFQLWYNQEYARFES 882
Score = 47 (21.6 bits), Expect = 4.2e-18, Sum P(3) = 4.2e-18
Identities = 19/66 (28%), Positives = 27/66 (40%)
Query: 60 YIKGEGTQK----HIGKILEFF------KTTDGEEYFRVQWFYRAEDTVMKEAADFH-DR 108
YIKG IG+I E K + + R+ FYR E+T +H D
Sbjct: 983 YIKGSNLDAPEPYRIGRIKEIHCGKKKGKVNEADIKLRLYKFYRPENTHRSYNGSYHTDI 1042
Query: 109 KRLFYS 114
L++S
Sbjct: 1043 NMLYWS 1048
Score = 46 (21.3 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 24/101 (23%), Positives = 44/101 (43%)
Query: 238 LDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQKLCKRFAVNIVE-RENKQRSMSQR 296
LD D+ + + + P +Q R+ AA+ KE + ++ A E R+ +R +R
Sbjct: 268 LDEDEDGKKDKRSSRPRSQPRDPAAK---RRPKEAEP--EQVAPETPEDRDEDEREEKRR 322
Query: 297 -VTRNSVNSPSITRNSVDSPKVTGNSVDSPRVTRSSVNSPR 336
TR + S ++ S K + P++ NSP+
Sbjct: 323 KTTRKKLESHTVPVQSRSERKAAQSKSVIPKI-----NSPK 358
Score = 40 (19.1 bits), Expect = 2.2e-17, Sum P(3) = 2.2e-17
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 67 QKHIGKILEFFKTTDGEEY 85
QK + K+LE + DG Y
Sbjct: 908 QKEMPKVLEQIEEVDGRVY 926
>UNIPROTKB|P26358 [details] [associations]
symbol:DNMT1 "DNA (cytosine-5)-methyltransferase 1"
species:9606 "Homo sapiens" [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005657 "replication
fork" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008327 "methyl-CpG binding" evidence=IEA] [GO:0016458 "gene
silencing" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0071230 "cellular response to
amino acid stimulus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010628 "positive regulation of gene expression" evidence=IMP]
[GO:0051573 "negative regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IMP] [GO:0010216 "maintenance of DNA
methylation" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0009008 "DNA-methyltransferase activity" evidence=IDA]
[GO:0003886 "DNA (cytosine-5-)-methyltransferase activity"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006306 "DNA
methylation" evidence=TAS] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0003723 GO:GO:0042127
GO:GO:0000122 GO:GO:0010628 GO:GO:0005721 GO:GO:0071230
GO:GO:0016458 Orphanet:36386 GO:GO:0005657 GO:GO:0051573
GO:GO:0051571 EMBL:AC020931 DrugBank:DB00928 DrugBank:DB01035
eggNOG:COG0270 KO:K00558 GO:GO:0003886 PANTHER:PTHR10629
DrugBank:DB01181 GO:GO:0010216 DrugBank:DB01262 InterPro:IPR022702
Pfam:PF12047 BRENDA:2.1.1.37 CTD:1786 HOGENOM:HOG000082497
HOVERGEN:HBG051384 OMA:SENWAME OrthoDB:EOG4T1HKN GO:GO:0008327
EMBL:X63692 EMBL:AF180682 EMBL:AC010077 EMBL:AC011511 EMBL:BC126227
EMBL:BC144093 EMBL:AH008119 IPI:IPI00031519 IPI:IPI00220918
IPI:IPI00220919 PIR:S22610 RefSeq:NP_001124295.1 RefSeq:NP_001370.1
UniGene:Hs.202672 PDB:3EPZ PDB:3PTA PDB:3SWR PDBsum:3EPZ
PDBsum:3PTA PDBsum:3SWR ProteinModelPortal:P26358 SMR:P26358
DIP:DIP-39693N IntAct:P26358 MINT:MINT-232346 STRING:P26358
REBASE:1161 PhosphoSite:P26358 DMDM:12231019 PaxDb:P26358
PRIDE:P26358 Ensembl:ENST00000340748 Ensembl:ENST00000359526
GeneID:1786 KEGG:hsa:1786 UCSC:uc002mng.3 UCSC:uc002mnh.3
GeneCards:GC19M010244 HGNC:HGNC:2976 HPA:CAB005876 HPA:HPA002694
MIM:126375 MIM:614116 neXtProt:NX_P26358 PharmGKB:PA27443
BindingDB:P26358 ChEMBL:CHEMBL1993 ChiTaRS:DNMT1 DrugBank:DB01099
EvolutionaryTrace:P26358 GenomeRNAi:1786 NextBio:7267
ArrayExpress:P26358 Bgee:P26358 CleanEx:HS_DNMT1
Genevestigator:P26358 GermOnline:ENSG00000130816 Uniprot:P26358
Length = 1616
Score = 220 (82.5 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 42/104 (40%), Positives = 64/104 (61%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1211 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1268
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1269 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1312
Score = 89 (36.4 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
+L LD++SGCGG+S G A +S T WA++ A ++ +LN+P + V E
Sbjct: 1138 KLRTLDVFSGCGGLSEGFHQ-AGISDT----LWAIEMWDPAAQAFRLNNPGSTVFTEDCN 1192
Query: 264 DFLELV 269
L+LV
Sbjct: 1193 ILLKLV 1198
Score = 77 (32.2 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 27/136 (19%), Positives = 58/136 (42%)
Query: 42 HYAQARIGECIFDLGDCAYIKGEGTQK--HIGKILEFFKTTDGEEYFRVQWFYRAEDTVM 99
+Y + I ++GDC + + + K ++ ++ ++ + + F WF DTV+
Sbjct: 746 YYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDTVL 805
Query: 100 KEAADFHDRKRLFYSTVMNDNPVDCIISKV-IVAQIPPKI-----GLKSNSIPSSD---- 149
+D LF D + I SKV ++ + P + G+ S+ D
Sbjct: 806 GATSD---PLELFLVDECEDMQLSYIHSKVKVIYKAPSENWAMEGGMDPESLLEGDDGKT 862
Query: 150 FYFDMEYCVEYSTFRT 165
+++ + Y +Y+ F +
Sbjct: 863 YFYQLWYDQDYARFES 878
Score = 61 (26.5 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 28/99 (28%), Positives = 42/99 (42%)
Query: 284 VERENKQRSMSQRVTRNSVNSPSITRNSVDSP---KVTGNSVD----SPRVTRSSVNSPR 336
+E N+ RS ++RV NSP + +P K G + SPR+TR S
Sbjct: 107 LENGNQARSEARRVGMADANSPPKPLSKPRTPRRSKSDGEAKPEPSPSPRITRKSTRQTT 166
Query: 337 VTRNSVNSPRDVDIPPGEYEVARIVD-ICYGDPNESGKR 374
+T + P P E E A+ + I D ++ KR
Sbjct: 167 ITSHFAKGPAKRK-PQEESERAKSDESIKEEDKDQDEKR 204
Score = 60 (26.2 bits), Expect = 6.8e-20, Sum P(3) = 6.8e-20
Identities = 33/119 (27%), Positives = 49/119 (41%)
Query: 60 YIKGEGTQK----HIGKILEFF--KTTDGEEY-----FRVQWFYRAEDTVMKEAADFH-D 107
YIKG IG+I E F K ++G RV FYR E+T A +H D
Sbjct: 979 YIKGSNLDAPEPYRIGRIKEIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHAD 1038
Query: 108 RKRLFYS---TVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDFYFDMEYCVEYSTF 163
L++S V++ V + +P + + S P+ FYF Y + +F
Sbjct: 1039 INLLYWSDEEAVVDFKAVQGRCTVEYGEDLPECVQVYSMGGPNR-FYFLEAYNAKSKSF 1096
>UNIPROTKB|F5GX68 [details] [associations]
symbol:DNMT1 "Cytosine-specific methyltransferase"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
GO:GO:0005634 GO:GO:0003677 GO:GO:0008270 EMBL:AC020931
GO:GO:0003886 PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047
EMBL:AC010077 EMBL:AC011511 HGNC:HGNC:2976 ChiTaRS:DNMT1
IPI:IPI01011182 ProteinModelPortal:F5GX68 SMR:F5GX68 PRIDE:F5GX68
Ensembl:ENST00000540357 UCSC:uc010xld.2 ArrayExpress:F5GX68
Bgee:F5GX68 Uniprot:F5GX68
Length = 1619
Score = 220 (82.5 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 42/104 (40%), Positives = 64/104 (61%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1211 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1268
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1269 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1312
Score = 89 (36.4 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
+L LD++SGCGG+S G A +S T WA++ A ++ +LN+P + V E
Sbjct: 1138 KLRTLDVFSGCGGLSEGFHQ-AGISDT----LWAIEMWDPAAQAFRLNNPGSTVFTEDCN 1192
Query: 264 DFLELV 269
L+LV
Sbjct: 1193 ILLKLV 1198
Score = 77 (32.2 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 27/136 (19%), Positives = 58/136 (42%)
Query: 42 HYAQARIGECIFDLGDCAYIKGEGTQK--HIGKILEFFKTTDGEEYFRVQWFYRAEDTVM 99
+Y + I ++GDC + + + K ++ ++ ++ + + F WF DTV+
Sbjct: 746 YYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQMFHAHWFCAGTDTVL 805
Query: 100 KEAADFHDRKRLFYSTVMNDNPVDCIISKV-IVAQIPPKI-----GLKSNSIPSSD---- 149
+D LF D + I SKV ++ + P + G+ S+ D
Sbjct: 806 GATSD---PLELFLVDECEDMQLSYIHSKVKVIYKAPSENWAMEGGMDPESLLEGDDGKT 862
Query: 150 FYFDMEYCVEYSTFRT 165
+++ + Y +Y+ F +
Sbjct: 863 YFYQLWYDQDYARFES 878
Score = 61 (26.5 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 28/99 (28%), Positives = 42/99 (42%)
Query: 284 VERENKQRSMSQRVTRNSVNSPSITRNSVDSP---KVTGNSVD----SPRVTRSSVNSPR 336
+E N+ RS ++RV NSP + +P K G + SPR+TR S
Sbjct: 107 LENGNQARSEARRVGMADANSPPKPLSKPRTPRRSKSDGEAKPEPSPSPRITRKSTRQTT 166
Query: 337 VTRNSVNSPRDVDIPPGEYEVARIVD-ICYGDPNESGKR 374
+T + P P E E A+ + I D ++ KR
Sbjct: 167 ITSHFAKGPAKRK-PQEESERAKSDESIKEEDKDQDEKR 204
Score = 60 (26.2 bits), Expect = 6.9e-20, Sum P(3) = 6.9e-20
Identities = 33/119 (27%), Positives = 49/119 (41%)
Query: 60 YIKGEGTQK----HIGKILEFF--KTTDGEEY-----FRVQWFYRAEDTVMKEAADFH-D 107
YIKG IG+I E F K ++G RV FYR E+T A +H D
Sbjct: 979 YIKGSNLDAPEPYRIGRIKEIFCPKKSNGRPNETDIKIRVNKFYRPENTHKSTPASYHAD 1038
Query: 108 RKRLFYS---TVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDFYFDMEYCVEYSTF 163
L++S V++ V + +P + + S P+ FYF Y + +F
Sbjct: 1039 INLLYWSDEEAVVDFKAVQGRCTVEYGEDLPECVQVYSMGGPNR-FYFLEAYNAKSKSF 1096
>UNIPROTKB|E2RHC6 [details] [associations]
symbol:DNMT1 "Cytosine-specific methyltransferase"
species:9615 "Canis lupus familiaris" [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR002857 InterPro:IPR010506
InterPro:IPR017198 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
Pfam:PF02008 Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058
SMART:SM00439 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
GO:GO:0003886 PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047
GeneTree:ENSGT00390000005100 EMBL:AAEX03012427 EMBL:AAEX03012426
Ensembl:ENSCAFT00000028398 Uniprot:E2RHC6
Length = 1613
Score = 224 (83.9 bits), Expect = 4.6e-21, Sum P(3) = 4.6e-21
Identities = 43/104 (41%), Positives = 64/104 (61%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P+Y L+ENV
Sbjct: 1210 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFLLENV 1267
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1268 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1311
Score = 90 (36.7 bits), Expect = 4.6e-21, Sum P(3) = 4.6e-21
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
+L LD++SGCGG+S G A +S T WA++ A ++ +LN+P + V E
Sbjct: 1137 KLRTLDVFSGCGGLSEGFHQ-AGIS----ETLWAIEMWDPAAQAFRLNNPGSTVFTEDCN 1191
Query: 264 DFLELV 269
L+LV
Sbjct: 1192 VLLKLV 1197
Score = 66 (28.3 bits), Expect = 4.6e-21, Sum P(3) = 4.6e-21
Identities = 27/138 (19%), Positives = 57/138 (41%)
Query: 42 HYAQARIGECIFDLGDCAYIKGEGTQKHI----GKILEFFKTTDGEEYFRVQWFYRAEDT 97
+Y + I ++GDC + + + K + ++ ++ + F WF DT
Sbjct: 743 YYKKVCIDSETLEVGDCVSVIPDDSSKPLYLASSRVTALWEDGSNGQMFHAHWFCAGTDT 802
Query: 98 VMKEAADFHDRKRLFYSTVMNDNPVDCIISKV-IVAQIPPKI-----GLKSNSIPSSD-- 149
V+ +D LF D + I SKV +V + P + G+ ++ + D
Sbjct: 803 VLGATSD---PLELFLVDECEDMQLSYIHSKVKVVYKAPSENWALEGGMDPEALITEDDG 859
Query: 150 --FYFDMEYCVEYSTFRT 165
+++ + Y +Y+ F +
Sbjct: 860 KTYFYQLWYDQDYARFES 877
Score = 58 (25.5 bits), Expect = 3.1e-20, Sum P(3) = 3.1e-20
Identities = 22/67 (32%), Positives = 30/67 (44%)
Query: 60 YIKGEGTQK----HIGKILEFF--KTTDGEEY-----FRVQWFYRAEDTVMKEAADFH-D 107
YIKG IG+I E F K ++G R+ FYR E+T A +H D
Sbjct: 978 YIKGSNLDAPEPYRIGRIKEIFCTKKSNGRPNETDIKIRINKFYRPENTHKSTPASYHAD 1037
Query: 108 RKRLFYS 114
L++S
Sbjct: 1038 INLLYWS 1044
Score = 42 (19.8 bits), Expect = 3.5e-13, Sum P(3) = 3.5e-13
Identities = 15/66 (22%), Positives = 26/66 (39%)
Query: 309 RNSVDSPKVTGNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDP 368
R+ D + S SPR+TR + + + P P E + A+ D +
Sbjct: 140 RSKSDGETKSEASSSSPRITRQTTRQTTILSHFARGPAKRK-PEEEPDKAKSDDSLEEEN 198
Query: 369 NESGKR 374
++ KR
Sbjct: 199 DQEEKR 204
Score = 41 (19.5 bits), Expect = 4.4e-13, Sum P(3) = 4.4e-13
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 270 KEWQKLCK-RFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSP 315
K KLC R + + E +++ S S R+TR + +I + P
Sbjct: 130 KPVSKLCTPRRSKSDGETKSEASSSSPRITRQTTRQTTILSHFARGP 176
Score = 38 (18.4 bits), Expect = 8.9e-13, Sum P(3) = 8.9e-13
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 284 VERENKQRSMSQRVTRNSVNSPSI 307
+E EN Q +RVT S I
Sbjct: 194 LEEENDQEEKRRRVTSREQRSDQI 217
Score = 37 (18.1 bits), Expect = 3.5e-13, Sum P(3) = 3.5e-13
Identities = 6/13 (46%), Positives = 6/13 (46%)
Query: 370 ESGKRGLNFKVHW 382
E G G F HW
Sbjct: 783 EDGSNGQMFHAHW 795
>RGD|620979 [details] [associations]
symbol:Dnmt1 "DNA (cytosine-5-)-methyltransferase 1"
species:10116 "Rattus norvegicus" [GO:0000792 "heterochromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0003723
"RNA binding" evidence=ISO] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IEA;IGI;ISO;IDA]
[GO:0005634 "nucleus" evidence=IEA;ISO;IDA] [GO:0005657
"replication fork" evidence=ISO] [GO:0005721 "centromeric
heterochromatin" evidence=ISO] [GO:0006306 "DNA methylation"
evidence=ISO;TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA;ISO]
[GO:0008327 "methyl-CpG binding" evidence=ISO;IDA] [GO:0008757
"S-adenosylmethionine-dependent methyltransferase activity"
evidence=TAS] [GO:0009008 "DNA-methyltransferase activity"
evidence=ISO] [GO:0010216 "maintenance of DNA methylation"
evidence=ISO;IDA] [GO:0010424 "DNA methylation on cytosine within a
CG sequence" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=ISO] [GO:0010628 "positive regulation of gene
expression" evidence=ISO] [GO:0016458 "gene silencing"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0042127 "regulation of cell proliferation" evidence=ISO]
[GO:0042826 "histone deacetylase binding" evidence=IPI] [GO:0043234
"protein complex" evidence=IDA] [GO:0045322 "unmethylated CpG
binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046498
"S-adenosylhomocysteine metabolic process" evidence=IDA]
[GO:0046499 "S-adenosylmethioninamine metabolic process"
evidence=IDA] [GO:0046500 "S-adenosylmethionine metabolic process"
evidence=IDA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISO] [GO:0051573 "negative regulation of
histone H3-K9 methylation" evidence=ISO] [GO:0051718 "DNA
(cytosine-5-)-methyltransferase activity, acting on CpG substrates"
evidence=IDA] [GO:0071230 "cellular response to amino acid
stimulus" evidence=ISO] [GO:0090116 "C-5 methylation of cytosine"
evidence=ISO] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
RGD:620979 GO:GO:0005634 GO:GO:0043234 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0003690
GO:GO:0046500 eggNOG:COG0270 PANTHER:PTHR10629 GO:GO:0046498
GO:GO:0010216 GO:GO:0045322 GO:GO:0010424 InterPro:IPR022702
Pfam:PF12047 GO:GO:0051718 GO:GO:0046499 HOGENOM:HOG000082497
HOVERGEN:HBG051384 GO:GO:0008327 EMBL:AB012214 EMBL:AF116344
EMBL:AF116345 EMBL:D64060 EMBL:AH007612 IPI:IPI00231930
IPI:IPI00231931 IPI:IPI00231933 IPI:IPI00231934 IPI:IPI00231935
IPI:IPI00231936 IPI:IPI00231937 IPI:IPI00231938 IPI:IPI00327802
PIR:JE0378 UniGene:Rn.6955 ProteinModelPortal:Q9Z330 IntAct:Q9Z330
STRING:Q9Z330 REBASE:3019 PhosphoSite:Q9Z330 PRIDE:Q9Z330
UCSC:RGD:620979 BioCyc:MetaCyc:MONOMER-8581 ArrayExpress:Q9Z330
Genevestigator:Q9Z330 Uniprot:Q9Z330
Length = 1622
Score = 219 (82.2 bits), Expect = 6.7e-21, Sum P(3) = 6.7e-21
Identities = 42/104 (40%), Positives = 64/104 (61%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1216 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1273
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1274 RNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1317
Score = 88 (36.0 bits), Expect = 6.7e-21, Sum P(3) = 6.7e-21
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
+L LD++SGCGG++ G A +S T WA++ + A ++ +LN+P V E
Sbjct: 1143 KLRTLDVFSGCGGLTEGFHQ-AGIS----ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCN 1197
Query: 264 DFLELV 269
L+LV
Sbjct: 1198 VLLKLV 1203
Score = 72 (30.4 bits), Expect = 6.7e-21, Sum P(3) = 6.7e-21
Identities = 18/73 (24%), Positives = 34/73 (46%)
Query: 34 KIVSNVECHYAQARIGECIFDLGDCAYIKGEGTQK--HIGKILEFFKTTDGEEYFRVQWF 91
KI N +Y + I E ++GDC + + K ++ ++ ++ +G+ F WF
Sbjct: 743 KIEEN-RTYYWKVSIDEETLEVGDCVSVIPDDPSKPLYLARVTALWEDKNGQ-MFHAHWF 800
Query: 92 YRAEDTVMKEAAD 104
DTV+ +D
Sbjct: 801 CAGTDTVLGATSD 813
Score = 51 (23.0 bits), Expect = 9.6e-19, Sum P(3) = 9.6e-19
Identities = 20/67 (29%), Positives = 29/67 (43%)
Query: 60 YIKGEGTQK----HIGKILEFF-------KTTDGEEYFRVQWFYRAEDTVMKEAADFH-D 107
YIKG IG+I E + K + + R+ FYR E+T A +H D
Sbjct: 984 YIKGSNLDAPEPYRIGRIKEIYCGKKKGGKVNEADIKIRLYKFYRPENTHKSIQATYHAD 1043
Query: 108 RKRLFYS 114
L++S
Sbjct: 1044 INLLYWS 1050
Score = 40 (19.1 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 67 QKHIGKILEFFKTTDGEEY 85
QK + K+LE + DG Y
Sbjct: 908 QKEMPKVLEQLEEVDGRVY 926
>UNIPROTKB|Q9Z330 [details] [associations]
symbol:Dnmt1 "DNA (cytosine-5)-methyltransferase 1"
species:10116 "Rattus norvegicus" [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001025 InterPro:IPR001525 InterPro:IPR002857
InterPro:IPR010506 InterPro:IPR017198 InterPro:IPR018117
Pfam:PF00145 Pfam:PF01426 Pfam:PF02008 Pfam:PF06464
PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS00095
PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439 RGD:620979
GO:GO:0005634 GO:GO:0043234 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0003690
GO:GO:0046500 eggNOG:COG0270 PANTHER:PTHR10629 GO:GO:0046498
GO:GO:0010216 GO:GO:0045322 GO:GO:0010424 InterPro:IPR022702
Pfam:PF12047 GO:GO:0051718 GO:GO:0046499 HOGENOM:HOG000082497
HOVERGEN:HBG051384 GO:GO:0008327 EMBL:AB012214 EMBL:AF116344
EMBL:AF116345 EMBL:D64060 EMBL:AH007612 IPI:IPI00231930
IPI:IPI00231931 IPI:IPI00231933 IPI:IPI00231934 IPI:IPI00231935
IPI:IPI00231936 IPI:IPI00231937 IPI:IPI00231938 IPI:IPI00327802
PIR:JE0378 UniGene:Rn.6955 ProteinModelPortal:Q9Z330 IntAct:Q9Z330
STRING:Q9Z330 REBASE:3019 PhosphoSite:Q9Z330 PRIDE:Q9Z330
UCSC:RGD:620979 BioCyc:MetaCyc:MONOMER-8581 ArrayExpress:Q9Z330
Genevestigator:Q9Z330 Uniprot:Q9Z330
Length = 1622
Score = 219 (82.2 bits), Expect = 6.7e-21, Sum P(3) = 6.7e-21
Identities = 42/104 (40%), Positives = 64/104 (61%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1216 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1273
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1274 RNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1317
Score = 88 (36.0 bits), Expect = 6.7e-21, Sum P(3) = 6.7e-21
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
+L LD++SGCGG++ G A +S T WA++ + A ++ +LN+P V E
Sbjct: 1143 KLRTLDVFSGCGGLTEGFHQ-AGIS----ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCN 1197
Query: 264 DFLELV 269
L+LV
Sbjct: 1198 VLLKLV 1203
Score = 72 (30.4 bits), Expect = 6.7e-21, Sum P(3) = 6.7e-21
Identities = 18/73 (24%), Positives = 34/73 (46%)
Query: 34 KIVSNVECHYAQARIGECIFDLGDCAYIKGEGTQK--HIGKILEFFKTTDGEEYFRVQWF 91
KI N +Y + I E ++GDC + + K ++ ++ ++ +G+ F WF
Sbjct: 743 KIEEN-RTYYWKVSIDEETLEVGDCVSVIPDDPSKPLYLARVTALWEDKNGQ-MFHAHWF 800
Query: 92 YRAEDTVMKEAAD 104
DTV+ +D
Sbjct: 801 CAGTDTVLGATSD 813
Score = 51 (23.0 bits), Expect = 9.6e-19, Sum P(3) = 9.6e-19
Identities = 20/67 (29%), Positives = 29/67 (43%)
Query: 60 YIKGEGTQK----HIGKILEFF-------KTTDGEEYFRVQWFYRAEDTVMKEAADFH-D 107
YIKG IG+I E + K + + R+ FYR E+T A +H D
Sbjct: 984 YIKGSNLDAPEPYRIGRIKEIYCGKKKGGKVNEADIKIRLYKFYRPENTHKSIQATYHAD 1043
Query: 108 RKRLFYS 114
L++S
Sbjct: 1044 INLLYWS 1050
Score = 40 (19.1 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 67 QKHIGKILEFFKTTDGEEY 85
QK + K+LE + DG Y
Sbjct: 908 QKEMPKVLEQLEEVDGRVY 926
>ZFIN|ZDB-GENE-990714-15 [details] [associations]
symbol:dnmt1 "DNA (cytosine-5-)-methyltransferase 1"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0090116 "C-5 methylation of cytosine" evidence=IEA] [GO:0006306
"DNA methylation" evidence=IEA;IMP] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0032776 "DNA
methylation on cytosine" evidence=IMP] [GO:0035622 "intrahepatic
bile duct development" evidence=IMP] [GO:0044030 "regulation of DNA
methylation" evidence=IMP] [GO:0031017 "exocrine pancreas
development" evidence=IMP] [GO:0048565 "digestive tract
development" evidence=IMP] [GO:0010842 "retina layer formation"
evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
[GO:0002088 "lens development in camera-type eye" evidence=IMP]
[GO:0060042 "retina morphogenesis in camera-type eye" evidence=IMP]
[GO:0051567 "histone H3-K9 methylation" evidence=IMP] [GO:0016740
"transferase activity" evidence=IEA] [GO:0032259 "methylation"
evidence=IEA] InterPro:IPR001025 InterPro:IPR001525
InterPro:IPR002857 InterPro:IPR010506 InterPro:IPR017198
InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426 Pfam:PF02008
Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105 PROSITE:PS00094
PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058 SMART:SM00439
ZFIN:ZDB-GENE-990714-15 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
GO:GO:0051216 GO:GO:0051567 GO:GO:0010842 GO:GO:0048565
GO:GO:0044030 GO:GO:0032776 GO:GO:0002088 GO:GO:0031017
GO:GO:0003886 PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047
GeneTree:ENSGT00390000005100 OMA:SENWAME GO:GO:0035622
EMBL:CU571160 IPI:IPI00486841 Ensembl:ENSDART00000021977
ArrayExpress:F1RCN0 Bgee:F1RCN0 Uniprot:F1RCN0
Length = 1500
Score = 221 (82.9 bits), Expect = 7.7e-19, Sum P(2) = 7.7e-19
Identities = 79/298 (26%), Positives = 141/298 (47%)
Query: 240 SDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQ-KLCKRFAVNIVERENKQRSMSQRVT 298
SD+ A ++ + + R E AED +E V+++ K RF +E N + T
Sbjct: 926 SDEEA--TVSMTEVLTRCRVEYAEDLVESVQDYSNKGPDRFY--FLEAYNAK-------T 974
Query: 299 RNSVNSPSITRNSVDSPKVTGNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVA 358
++ + P+ R++V+ K G + +++ P+ P++ +P +
Sbjct: 975 KSFEDPPNHARSAVNKGKGKGKGKGKGK-GKAAPQEPQD-----QEPQEPVVP--KLRTL 1026
Query: 359 RIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPI-EGLR-NCPER---------IKE 407
+ C G + G++ + HW + + W+P + R N P + +
Sbjct: 1027 DVFSGCGGLSEGFHQAGIS-ETHW-----AIEMWDPAAQAFRLNNPGTTVFTEDCNVLLK 1080
Query: 408 FVRNGFKSKIL----PLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDI 463
V +G K+ L P GDV+++CGGPPCQG SG NRF + +N +V ++
Sbjct: 1081 LVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSYLSY 1138
Query: 464 VEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ +PK+ L+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1139 CDYYRPKFFLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1196
Score = 96 (38.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 200 PHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRN 259
P +L LD++SGCGG+S G A +S T WA++ A ++ +LN+P V
Sbjct: 1018 PVVPKLRTLDVFSGCGGLSEGFHQ-AGIS----ETHWAIEMWDPAAQAFRLNNPGTTVFT 1072
Query: 260 EAAEDFLELVKEWQK 274
E L+LV +K
Sbjct: 1073 EDCNVLLKLVMSGEK 1087
Score = 92 (37.4 bits), Expect = 7.7e-19, Sum P(2) = 7.7e-19
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 42 HYAQARIGECIFDLGDCAYIKGEGTQK--HIGKILEFFKTTDGEEYFRVQWFYRAEDTVM 99
+Y + R+ + ++GDC + + ++ +I + DGE+ F WF R DTV+
Sbjct: 626 YYMKVRVENEVLEVGDCVSVSPDDPSHPLYLARITALWD--DGEKMFHAHWFCRGTDTVL 683
Query: 100 KEAAD 104
E++D
Sbjct: 684 GESSD 688
>UNIPROTKB|D4A8Z6 [details] [associations]
symbol:Dnmt1 "Cytosine-specific methyltransferase"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003886 "DNA (cytosine-5-)-methyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001025
InterPro:IPR001525 InterPro:IPR002857 InterPro:IPR010506
InterPro:IPR017198 InterPro:IPR018117 Pfam:PF00145 Pfam:PF01426
Pfam:PF02008 Pfam:PF06464 PIRSF:PIRSF037404 PRINTS:PR00105
PROSITE:PS00094 PROSITE:PS00095 PROSITE:PS51038 PROSITE:PS51058
SMART:SM00439 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
GO:GO:0003886 PANTHER:PTHR10629 InterPro:IPR022702 Pfam:PF12047
IPI:IPI00327802 ProteinModelPortal:D4A8Z6
Ensembl:ENSRNOT00000061192 ArrayExpress:D4A8Z6 Uniprot:D4A8Z6
Length = 1616
Score = 117 (46.2 bits), Expect = 9.9e-10, Sum P(3) = 9.9e-10
Identities = 32/110 (29%), Positives = 55/110 (50%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ + + + + ++M ++
Sbjct: 1210 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSLRDREESEDIVMGSI 1267
Query: 478 VDILKFDKASLGRYALSRLVHMK------YQARFGIIAAGCYGLPQFRLR 521
+ S + + +HM+ ++ AG YG+ Q R R
Sbjct: 1268 ------PRESGWQGPMQTSMHMRCCFPVWLSVSLPLLQAGQYGVAQTRRR 1311
Score = 88 (36.0 bits), Expect = 9.9e-10, Sum P(3) = 9.9e-10
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
+L LD++SGCGG++ G A +S T WA++ + A ++ +LN+P V E
Sbjct: 1137 KLRTLDVFSGCGGLTEGFHQ-AGIS----ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCN 1191
Query: 264 DFLELV 269
L+LV
Sbjct: 1192 VLLKLV 1197
Score = 72 (30.4 bits), Expect = 9.9e-10, Sum P(3) = 9.9e-10
Identities = 18/73 (24%), Positives = 34/73 (46%)
Query: 34 KIVSNVECHYAQARIGECIFDLGDCAYIKGEGTQK--HIGKILEFFKTTDGEEYFRVQWF 91
KI N +Y + I E ++GDC + + K ++ ++ ++ +G+ F WF
Sbjct: 739 KIEEN-RTYYWKVSIDEETLEVGDCVSVIPDDPSKPLYLARVTALWEDKNGQ-MFHAHWF 796
Query: 92 YRAEDTVMKEAAD 104
DTV+ +D
Sbjct: 797 CAGTDTVLGATSD 809
Score = 40 (19.1 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 67 QKHIGKILEFFKTTDGEEY 85
QK + K+LE + DG Y
Sbjct: 904 QKEMPKVLEQLEEVDGRVY 922
>TIGR_CMR|SPO_1049 [details] [associations]
symbol:SPO_1049 "DNA methylase, C-5 cytosine-specific
family" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003886 "DNA
(cytosine-5-)-methyltransferase activity" evidence=ISS] [GO:0006304
"DNA modification" evidence=ISS] InterPro:IPR001525 Pfam:PF00145
PRINTS:PR00105 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003677 GO:GO:0006306 GO:GO:0008168 KO:K00558
PANTHER:PTHR10629 TIGRFAMs:TIGR00675 OMA:LLYEFAR RefSeq:YP_166300.1
ProteinModelPortal:Q5LUK5 REBASE:10710 GeneID:3194254
KEGG:sil:SPO1049 PATRIC:23375391 HOGENOM:HOG000225505
ProtClustDB:CLSK933423 Uniprot:Q5LUK5
Length = 373
Score = 152 (58.6 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 35/101 (34%), Positives = 52/101 (51%)
Query: 421 PGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI 480
PG++ V+ GGPPCQ S YN R + DER ++ IV+ L+P++++MENV I
Sbjct: 70 PGELTVLAGGPPCQAYSVYNHQRG----MHDERATLFKEYLRIVDGLRPEWIVMENVTGI 125
Query: 481 LKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
S L + Y+ ++ A YG+PQ R R
Sbjct: 126 YSIGGGEAVAAIKSELAALGYEVEEAVLRAEEYGVPQERRR 166
Score = 48 (22.0 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 208 LDLYSGCGGMSTGL 221
+DL+ G GG+S GL
Sbjct: 6 IDLFCGAGGLSAGL 19
>UNIPROTKB|K7ENW7 [details] [associations]
symbol:DNMT1 "DNA (cytosine-5)-methyltransferase 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006306 "DNA methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] InterPro:IPR001525
Pfam:PF00145 PRINTS:PR00105 EMBL:AC020931 PANTHER:PTHR10629
EMBL:AC010077 EMBL:AC011511 HGNC:HGNC:2976 Ensembl:ENST00000588913
Uniprot:K7ENW7
Length = 389
Score = 156 (60.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 32/89 (35%), Positives = 51/89 (57%)
Query: 433 CQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYA 492
CQG SG NRF + +N +V F+ ++ +P++ L+ENV + + F ++ + +
Sbjct: 2 CQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLT 59
Query: 493 LSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L LV M YQ FG++ AG YG+ Q R R
Sbjct: 60 LRCLVRMGYQCTFGVLQAGQYGVAQTRRR 88
>UNIPROTKB|F1NJ02 [details] [associations]
symbol:TRDMT1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006306
"DNA methylation" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] InterPro:IPR001525 InterPro:IPR018117
Pfam:PF00145 PRINTS:PR00105 PROSITE:PS00095 GO:GO:0003677
GO:GO:0006306 GO:GO:0008168 PANTHER:PTHR10629 OMA:LFYEFAR
TIGRFAMs:TIGR00675 GeneTree:ENSGT00390000016416 InterPro:IPR025813
PROSITE:PS51607 EMBL:AADN02000651 IPI:IPI00619885 PRIDE:F1NJ02
Ensembl:ENSGALT00000014137 Uniprot:F1NJ02
Length = 398
Score = 102 (41.0 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 34/102 (33%), Positives = 52/102 (50%)
Query: 425 DVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLK--PKYVLMENVVDILK 482
D+I PPCQ + R + + D R + + +DI+ L+ PKY+L+ENV
Sbjct: 71 DMILMSPPCQP---FTRI-GLQGDVSDPRTKSFLYILDILPRLQKCPKYLLLENVKG--- 123
Query: 483 FDKASLGRYALSRLVH---MKYQARFGIIAAGCYGLPQFRLR 521
F+ +S R L R + KYQ F +++ C G+P RLR
Sbjct: 124 FESSS-ARNELLRTLETCGFKYQ-EF-LLSPTCLGIPNSRLR 162
Score = 68 (29.0 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 25/73 (34%), Positives = 34/73 (46%)
Query: 203 AELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAA 262
A L +L+LYSG GGM L K SC A+D + A E K N P + +
Sbjct: 2 AALRVLELYSGIGGMHQAL----KESCICAEVVAAVDVNTLANEVYKHNFPSTPLWAKTI 57
Query: 263 EDFLELVKEWQKL 275
E +KE+ +L
Sbjct: 58 EGIT--LKEFDRL 68
>UNIPROTKB|O34939 [details] [associations]
symbol:ydiO "Probable BsuMI modification methylase subunit
YdiO" species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008168 "methyltransferase activity" evidence=NAS] [GO:0009307
"DNA restriction-modification system" evidence=IMP] [GO:0032776
"DNA methylation on cytosine" evidence=IMP] InterPro:IPR001525
Pfam:PF00145 PRINTS:PR00105 PROSITE:PS00094 PROSITE:PS00095
GO:GO:0003677 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0008168
eggNOG:COG0270 KO:K00558 GO:GO:0003886 GO:GO:0090116
PANTHER:PTHR10629 HSSP:O14717 TIGRFAMs:TIGR00675 GO:GO:0009307
EMBL:AB007637 PIR:H69787 RefSeq:NP_388487.1
ProteinModelPortal:O34939 SMR:O34939 REBASE:3612
EnsemblBacteria:EBBACT00000001239 GeneID:939892 KEGG:bsu:BSU06060
PATRIC:18972844 GenoList:BSU06060 HOGENOM:HOG000098493 OMA:LLYEFAR
ProtClustDB:CLSK2460890 BioCyc:BSUB:BSU06060-MONOMER Uniprot:O34939
Length = 427
Score = 98 (39.6 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 38/137 (27%), Positives = 58/137 (42%)
Query: 385 YSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRN 444
+S +E + I G P ++E K K+ +D I GPPCQG S N
Sbjct: 135 FSLNESIEKHINGELGAPLTVEE---QRIKDKVKK----IDFILAGPPCQGHSDLNNHTR 187
Query: 445 VDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQAR 504
P RN ++ ++E +P VL+ENV I+ DK+ + + L Y
Sbjct: 188 RKDP----RNALLMRVSRVIELFQPSSVLVENVPGIIH-DKSGSFKEFKNHLKTQGYYFD 242
Query: 505 FGIIAAGCYGLPQFRLR 521
++ A G+ Q R R
Sbjct: 243 EIVLNAEKLGVSQARRR 259
Score = 73 (30.8 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 21/72 (29%), Positives = 36/72 (50%)
Query: 193 ENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNH 252
+N PN + + DL+SGCGG+S G+ + N +A D +++A + N
Sbjct: 72 KNRPNTELTTESINIADLFSGCGGLSLGVWEACRALGINPRFSFACDLNEAALSVYEKNF 131
Query: 253 -PEAQVRNEAAE 263
P+ + NE+ E
Sbjct: 132 SPDFSL-NESIE 142
>MGI|MGI:1923998 [details] [associations]
symbol:Pbrm1 "polybromo 1" species:10090 "Mus musculus"
[GO:0000776 "kinetochore" evidence=IDA] [GO:0001890 "placenta
development" evidence=IMP] [GO:0001974 "blood vessel remodeling"
evidence=TAS] [GO:0003007 "heart morphogenesis" evidence=TAS]
[GO:0003349 "epicardium-derived cardiac endothelial cell
differentiation" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IC] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007507 "heart development"
evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0060948 "cardiac vascular smooth
muscle cell development" evidence=TAS] [GO:0060979 "vasculogenesis
involved in coronary vascular morphogenesis" evidence=TAS]
InterPro:IPR009071 InterPro:IPR001025 InterPro:IPR001487
Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51038 SMART:SM00297 SMART:SM00439 MGI:MGI:1923998
Pfam:PF00505 GO:GO:0005634 GO:GO:0045893 GO:GO:0008285
GO:GO:0000776 GO:GO:0003677 GO:GO:0003007 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0001974 GO:GO:0001890
GO:GO:0060979 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 InterPro:IPR018359 GO:GO:0060948 EMBL:AC154446
HOVERGEN:HBG079860 OrthoDB:EOG41NTK5 ChiTaRS:PBRM1 EMBL:AC154727
EMBL:BC023452 EMBL:BC029037 EMBL:BC055456 EMBL:BC055708
EMBL:BF451491 EMBL:CN530699 EMBL:AK009582 EMBL:AK030781
EMBL:AK030252 EMBL:AK166588 IPI:IPI00856358 IPI:IPI01023209
UniGene:Mm.27913 PDB:2YQD PDBsum:2YQD ProteinModelPortal:Q8BSQ9
SMR:Q8BSQ9 DIP:DIP-48885N IntAct:Q8BSQ9 STRING:Q8BSQ9
PhosphoSite:Q8BSQ9 PaxDb:Q8BSQ9 PRIDE:Q8BSQ9
Ensembl:ENSMUST00000112094 Ensembl:ENSMUST00000112095
GeneTree:ENSGT00390000003017 EvolutionaryTrace:Q8BSQ9 Bgee:Q8BSQ9
Genevestigator:Q8BSQ9 GO:GO:0003349 Uniprot:Q8BSQ9
Length = 1634
Score = 132 (51.5 bits), Expect = 0.00011, P = 0.00011
Identities = 35/118 (29%), Positives = 55/118 (46%)
Query: 36 VSNVE--CHY-AQARIGECIFDLGDCAYIKGEG-TQKHIGKILEFFKTTDGEEYFRVQWF 91
+SN E CHY Q R + +GDC +IK G + +G+I + + DG YF F
Sbjct: 1138 MSNGEPGCHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVW-VRDGAAYFYGPIF 1196
Query: 92 YRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSD 149
E+T + F+ +K +F S + P+ CI+ K V + + IP +D
Sbjct: 1197 IHPEETEHEPTKMFY-KKEVFLSNLEETCPMSCILGKCAVLSFKDFLSCRPTEIPEND 1253
>RGD|1565549 [details] [associations]
symbol:Pbrm1 "polybromo 1" species:10116 "Rattus norvegicus"
[GO:0000776 "kinetochore" evidence=IEA;ISO] [GO:0001890 "placenta
development" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0007507 "heart development"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA;ISO] InterPro:IPR009071 InterPro:IPR001025
InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297 SMART:SM00439
Pfam:PF00505 RGD:1565549 GO:GO:0008285 GO:GO:0007507 GO:GO:0000776
GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0001890 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
OrthoDB:EOG41NTK5 GeneTree:ENSGT00390000003017 IPI:IPI00766567
Ensembl:ENSRNOT00000016581 UCSC:RGD:1565549 NextBio:655693
ArrayExpress:D3ZT52 Uniprot:D3ZT52
Length = 1704
Score = 132 (51.5 bits), Expect = 0.00011, P = 0.00011
Identities = 35/118 (29%), Positives = 55/118 (46%)
Query: 36 VSNVE--CHY-AQARIGECIFDLGDCAYIKGEG-TQKHIGKILEFFKTTDGEEYFRVQWF 91
+SN E CHY Q R + +GDC +IK G + +G+I + + DG YF F
Sbjct: 1153 MSNGEPGCHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVW-VRDGAAYFYGPIF 1211
Query: 92 YRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSD 149
E+T + F+ +K +F S + P+ CI+ K V + + IP +D
Sbjct: 1212 IHPEETEHEPTKMFY-KKEVFLSNLEETCPMSCILGKCAVLSFKDFLSCRPTEIPEND 1268
>FB|FBgn0030854 [details] [associations]
symbol:CG8289 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000953
PROSITE:PS50013 SMART:SM00298 Pfam:PF00385 GO:GO:0005634
EMBL:AE014298 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR023780
HSSP:P83917 EMBL:AY051870 RefSeq:NP_573229.1 UniGene:Dm.4458
SMR:Q9VX35 MINT:MINT-964717 STRING:Q9VX35
EnsemblMetazoa:FBtr0074484 GeneID:32741 KEGG:dme:Dmel_CG8289
UCSC:CG8289-RA FlyBase:FBgn0030854 eggNOG:NOG245488
InParanoid:Q9VX35 OMA:GVANESE OrthoDB:EOG4BRV3C ChiTaRS:CG8289
GenomeRNAi:32741 NextBio:780137 Uniprot:Q9VX35
Length = 336
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 34/121 (28%), Positives = 59/121 (48%)
Query: 291 RSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDI 350
+ ++++ + + V++ + S KV S SP ++ R RN+ D I
Sbjct: 171 KKVAEKDSESDVDAGTEDEKSAQPQKVAAKSKSSPNAKKAK---GRGRRNAGTKKADDSI 227
Query: 351 PPG-EYEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFV 409
P ++EV +I+D + + K G FK+ WK Y +DSWEP + L C I++F+
Sbjct: 228 DPEKQWEVEKILD------HVATKEGDMFKIRWKKYGPKDDSWEPSKNLA-CDALIEKFM 280
Query: 410 R 410
R
Sbjct: 281 R 281
>UNIPROTKB|E2RRR3 [details] [associations]
symbol:PBRM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR009071 InterPro:IPR001025 InterPro:IPR001487
Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51038 SMART:SM00297 SMART:SM00439 Pfam:PF00505
GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00390000003017 EMBL:AAEX03012193
EMBL:AAEX03012194 EMBL:AAEX03012195 Ensembl:ENSCAFT00000014499
Uniprot:E2RRR3
Length = 1635
Score = 131 (51.2 bits), Expect = 0.00014, P = 0.00014
Identities = 35/118 (29%), Positives = 55/118 (46%)
Query: 36 VSNVE--CHY-AQARIGECIFDLGDCAYIKGEG-TQKHIGKILEFFKTTDGEEYFRVQWF 91
+SN E CHY Q R + +GDC +IK G + +G+I + + DG YF F
Sbjct: 1139 MSNGEPGCHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVW-VRDGAAYFYGPIF 1197
Query: 92 YRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSD 149
E+T + F+ +K +F S + P+ CI+ K V + + IP +D
Sbjct: 1198 IHPEETEHEPTKMFY-KKEVFLSNLEETCPMTCILGKCAVLSFKDFLSCRPTEIPEND 1254
>UNIPROTKB|E1BNH8 [details] [associations]
symbol:E1BNH8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001890 "placenta
development" evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR009071
InterPro:IPR001025 InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297
SMART:SM00439 Pfam:PF00505 GO:GO:0008285 GO:GO:0007507
GO:GO:0000776 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0001890
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 OMA:WLKVGDC GeneTree:ENSGT00390000003017
EMBL:DAAA02054367 IPI:IPI00699896 Ensembl:ENSBTAT00000019672
Uniprot:E1BNH8
Length = 1664
Score = 131 (51.2 bits), Expect = 0.00014, P = 0.00014
Identities = 35/118 (29%), Positives = 55/118 (46%)
Query: 36 VSNVE--CHY-AQARIGECIFDLGDCAYIKGEG-TQKHIGKILEFFKTTDGEEYFRVQWF 91
+SN E CHY Q R + +GDC +IK G + +G+I + + DG YF F
Sbjct: 1113 MSNGEPGCHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVW-VRDGAAYFYGPIF 1171
Query: 92 YRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSD 149
E+T + F+ +K +F S + P+ CI+ K V + + IP +D
Sbjct: 1172 IHPEETEHEPTKMFY-KKEVFLSNLEETCPMTCILGKCAVLSFKDFLSCRPTEIPEND 1228
>UNIPROTKB|E2RRL7 [details] [associations]
symbol:PBRM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR009071 InterPro:IPR001025 InterPro:IPR001487
Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51038 SMART:SM00297 SMART:SM00439 Pfam:PF00505
GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 OMA:WLKVGDC GeneTree:ENSGT00390000003017
EMBL:AAEX03012193 EMBL:AAEX03012194 EMBL:AAEX03012195
Ensembl:ENSCAFT00000014524 Uniprot:E2RRL7
Length = 1689
Score = 131 (51.2 bits), Expect = 0.00014, P = 0.00014
Identities = 35/118 (29%), Positives = 55/118 (46%)
Query: 36 VSNVE--CHY-AQARIGECIFDLGDCAYIKGEG-TQKHIGKILEFFKTTDGEEYFRVQWF 91
+SN E CHY Q R + +GDC +IK G + +G+I + + DG YF F
Sbjct: 1138 MSNGEPGCHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVW-VRDGAAYFYGPIF 1196
Query: 92 YRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSD 149
E+T + F+ +K +F S + P+ CI+ K V + + IP +D
Sbjct: 1197 IHPEETEHEPTKMFY-KKEVFLSNLEETCPMTCILGKCAVLSFKDFLSCRPTEIPEND 1253
>UNIPROTKB|E2QXE3 [details] [associations]
symbol:PARP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002110 InterPro:IPR000953 Pfam:PF00023 PROSITE:PS50013
PROSITE:PS50088 SMART:SM00248 SMART:SM00298 Pfam:PF00385
GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598 CTD:54737
OMA:REEKSPD GeneTree:ENSGT00530000063006 EMBL:AAEX03014282
EMBL:AAEX03014280 EMBL:AAEX03014281 RefSeq:NP_001139453.1
UniGene:Cfa.33196 ProteinModelPortal:E2QXE3
Ensembl:ENSCAFT00000011808 GeneID:100271920 KEGG:cfa:100271920
NextBio:20795966 Uniprot:E2QXE3
Length = 860
Score = 125 (49.1 bits), Expect = 0.00029, P = 0.00029
Identities = 36/123 (29%), Positives = 61/123 (49%)
Query: 304 SP-SITRNSVDSPKVTGNSVDSPRVTR-SSVNSPRVTRNSVNSPRDVDIPPGEYEVARIV 361
SP S +V+SP+ G V + + ++ +S DV +EV +I+
Sbjct: 16 SPVSGAAGNVESPEAEGEGVGAAGEEKDAATRGAEAAGDSEEDGEDV------FEVEKIL 69
Query: 362 DICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLP 421
D+ E GK + +KV WKGY++ +D+WEP L +C E + EF + ++K P+
Sbjct: 70 DM----KTEGGK--ILYKVRWKGYTSDDDTWEPEIHLEDCKEVLLEFRKKIVENKAKPVK 123
Query: 422 GDV 424
D+
Sbjct: 124 KDI 126
>UNIPROTKB|E7EVG2 [details] [associations]
symbol:PBRM1 "Protein polybromo-1" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR009071
InterPro:IPR001025 InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297
SMART:SM00439 Pfam:PF00505 GO:GO:0003677 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:AC104446
HGNC:HGNC:30064 ChiTaRS:PBRM1 EMBL:AC112215 IPI:IPI00916875
ProteinModelPortal:E7EVG2 SMR:E7EVG2 Ensembl:ENST00000423351
UCSC:uc003dez.1 ArrayExpress:E7EVG2 Bgee:E7EVG2 Uniprot:E7EVG2
Length = 1461
Score = 126 (49.4 bits), Expect = 0.00042, P = 0.00042
Identities = 34/118 (28%), Positives = 54/118 (45%)
Query: 36 VSNVE--CHY-AQARIGECIFDLGDCAYIKGEG-TQKHIGKILEFFKTTDGEEYFRVQWF 91
+SN E CHY Q + +GDC +IK G + +G+I + + DG YF F
Sbjct: 1137 MSNGEPGCHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVW-VRDGAAYFYGPIF 1195
Query: 92 YRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSD 149
E+T + F+ +K +F S + P+ CI+ K V + + IP +D
Sbjct: 1196 IHPEETEHEPTKMFY-KKEVFLSNLEETCPMTCILGKCAVLSFKDFLSCRPTEIPEND 1252
>UNIPROTKB|Q86U86 [details] [associations]
symbol:PBRM1 "Protein polybromo-1" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0001890 "placenta
development" evidence=IEA] [GO:0007507 "heart development"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0003682 "chromatin binding" evidence=NAS] [GO:0007067 "mitosis"
evidence=TAS] [GO:0000228 "nuclear chromosome" evidence=NAS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR009071 InterPro:IPR001025 InterPro:IPR001487
Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51038 SMART:SM00297 SMART:SM00439 Pfam:PF00505
GO:GO:0008285 GO:GO:0007507 GO:GO:0000776 GO:GO:0007067
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0001890 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 InterPro:IPR018359 GO:GO:0000228
MIM:144700 CTD:55193 HOVERGEN:HBG079860 KO:K11757 EMBL:AF197569
EMBL:AF225870 EMBL:AF225871 EMBL:AF225872 EMBL:AF177387
EMBL:AY281068 EMBL:BC115009 EMBL:BC115010 EMBL:BC115011
EMBL:BC129934 EMBL:BC129935 EMBL:AK056541 IPI:IPI00023097
IPI:IPI00301041 IPI:IPI00334894 IPI:IPI00384176 IPI:IPI00398781
IPI:IPI00640304 IPI:IPI00873041 IPI:IPI00909142 IPI:IPI00910435
RefSeq:NP_060783.3 UniGene:Hs.189920 UniGene:Hs.476320 PDB:2KTB
PDB:3G0J PDB:3HMF PDB:3IU5 PDB:3IU6 PDB:3K2J PDB:3LJW PDB:3MB4
PDB:3TLP PDBsum:2KTB PDBsum:3G0J PDBsum:3HMF PDBsum:3IU5
PDBsum:3IU6 PDBsum:3K2J PDBsum:3LJW PDBsum:3MB4 PDBsum:3TLP
ProteinModelPortal:Q86U86 SMR:Q86U86 DIP:DIP-33045N IntAct:Q86U86
MINT:MINT-1195749 STRING:Q86U86 PhosphoSite:Q86U86 DMDM:73921624
PaxDb:Q86U86 PRIDE:Q86U86 Ensembl:ENST00000296302
Ensembl:ENST00000337303 Ensembl:ENST00000356770
Ensembl:ENST00000394830 Ensembl:ENST00000409057
Ensembl:ENST00000409114 Ensembl:ENST00000409767
Ensembl:ENST00000410007 Ensembl:ENST00000412587 GeneID:55193
KEGG:hsa:55193 UCSC:uc003deq.2 UCSC:uc003der.2 UCSC:uc003des.2
UCSC:uc003det.2 UCSC:uc003deu.2 UCSC:uc003dew.2 UCSC:uc003dey.2
UCSC:uc010hmk.1 GeneCards:GC03M052579 H-InvDB:HIX0003364
HGNC:HGNC:30064 HPA:HPA015629 MIM:606083 neXtProt:NX_Q86U86
PharmGKB:PA162398846 InParanoid:Q86U86 OMA:WLKVGDC PhylomeDB:Q86U86
ChEMBL:CHEMBL1795184 ChiTaRS:PBRM1 EvolutionaryTrace:Q86U86
GenomeRNAi:55193 NextBio:59051 ArrayExpress:Q86U86 Bgee:Q86U86
Genevestigator:Q86U86 GermOnline:ENSG00000163939 Uniprot:Q86U86
Length = 1689
Score = 126 (49.4 bits), Expect = 0.00049, P = 0.00049
Identities = 34/118 (28%), Positives = 54/118 (45%)
Query: 36 VSNVE--CHY-AQARIGECIFDLGDCAYIKGEG-TQKHIGKILEFFKTTDGEEYFRVQWF 91
+SN E CHY Q + +GDC +IK G + +G+I + + DG YF F
Sbjct: 1138 MSNGEPGCHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVW-VRDGAAYFYGPIF 1196
Query: 92 YRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSD 149
E+T + F+ +K +F S + P+ CI+ K V + + IP +D
Sbjct: 1197 IHPEETEHEPTKMFY-KKEVFLSNLEETCPMTCILGKCAVLSFKDFLSCRPTEIPEND 1253
>ZFIN|ZDB-GENE-010501-3 [details] [associations]
symbol:pbrm1l "polybromo 1, like" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR009071 InterPro:IPR001025
InterPro:IPR001487 Pfam:PF00439 Pfam:PF01426 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51038 SMART:SM00297 SMART:SM00439
Pfam:PF00505 ZFIN:ZDB-GENE-010501-3 GO:GO:0003677 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00390000003017 EMBL:BX546446 EMBL:BX649498
IPI:IPI00993768 Ensembl:ENSDART00000131203 Uniprot:E7EZ71
Length = 1648
Score = 125 (49.1 bits), Expect = 0.00061, P = 0.00061
Identities = 30/117 (25%), Positives = 55/117 (47%)
Query: 42 HYAQARIGECIFDLGDCAYIKGEG-TQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTVMK 100
+Y Q R + LGDC YI+ G + +G+I + + DG +F F E+T +
Sbjct: 1124 YYEQLRYNDMWLKLGDCVYIRSHGLVRPRVGRIEKMW-LRDGAAFFFGPIFIHPEETEHE 1182
Query: 101 EAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSD-FYFDMEY 156
F+ R+ +F S++ + P+ C++ K +V+ + + P D F+ Y
Sbjct: 1183 PTKMFYKRE-VFLSSLEENCPMTCVLRKCVVSSFKDFLSCRPTECPEEDVLLFESRY 1238
>UNIPROTKB|E2RM86 [details] [associations]
symbol:TRDMT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0006306 "DNA methylation" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001525
InterPro:IPR018117 Pfam:PF00145 PRINTS:PR00105 PROSITE:PS00095
GO:GO:0003677 GO:GO:0006306 GO:GO:0008168 PANTHER:PTHR10629
KO:K15336 OMA:LFYEFAR TIGRFAMs:TIGR00675 CTD:1787
GeneTree:ENSGT00390000016416 InterPro:IPR025813 PROSITE:PS51607
EMBL:AAEX03001247 RefSeq:XP_848593.1 ProteinModelPortal:E2RM86
Ensembl:ENSCAFT00000007328 GeneID:487116 KEGG:cfa:487116
NextBio:20860760 Uniprot:E2RM86
Length = 391
Score = 89 (36.4 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 425 DVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLK--PKYVLMENVVDILK 482
++I PPCQ + R + + D R ++ ++I+ L+ PKYVL+ENV
Sbjct: 71 NMILMSPPCQP---FTRI-GLQGDVTDPRTNSLLYILNILPRLQKLPKYVLLENVKG--- 123
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
F+ +S + L + +Q + +++ +G+P RLR
Sbjct: 124 FEVSSTRDLLIQTLENCGFQYQEFLLSPTSFGIPNSRLR 162
Score = 72 (30.4 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 24/71 (33%), Positives = 34/71 (47%)
Query: 205 LALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAED 264
L +L+LYSG GGM L + SC A+D + A E K N P Q+ + E
Sbjct: 4 LRVLELYSGIGGMHQAL----RESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEG 59
Query: 265 FLELVKEWQKL 275
++E+ KL
Sbjct: 60 IT--LEEFDKL 68
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 521 500 0.00084 119 3 11 22 0.39 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 33
No. of states in DFA: 624 (66 KB)
Total size of DFA: 324 KB (2164 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 45.11u 0.10s 45.21t Elapsed: 00:00:02
Total cpu time: 45.11u 0.10s 45.21t Elapsed: 00:00:02
Start: Sat May 11 13:24:44 2013 End: Sat May 11 13:24:46 2013