BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046469
(521 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224071435|ref|XP_002303458.1| DNA methyltransferase [Populus trichocarpa]
gi|222840890|gb|EEE78437.1| DNA methyltransferase [Populus trichocarpa]
Length = 729
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/495 (69%), Positives = 384/495 (77%), Gaps = 49/495 (9%)
Query: 27 YSDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIKGEGTQKHIGKILEFFKTTDGEEYF 86
+SDDDEDK+V NVECHY QA I I +LGDC Y+KGEG + HIG ILEFFKTTD E+YF
Sbjct: 2 FSDDDEDKVVWNVECHYTQANIEGRIINLGDCVYVKGEGAKNHIGSILEFFKTTDREDYF 61
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
RVQWFYRAEDTVMKEAADFHD KRLFYSTVMNDNP+DCIISKV V QI P++ LK +S P
Sbjct: 62 RVQWFYRAEDTVMKEAADFHDNKRLFYSTVMNDNPIDCIISKVTVVQISPRVHLKFHSTP 121
Query: 147 SSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELA 206
+SDFYFDMEYCV+YSTFRTLLTGK +L+ T+ + ENM G +KA+L
Sbjct: 122 ASDFYFDMEYCVDYSTFRTLLTGK--NLNSTPGTDDIS-------MENMSTCGSYKAKLT 172
Query: 207 LLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFL 266
LLDL+SGCGGMSTGLCLGAK+SC +LVTRWALDSD+SAC+SLKLNHPE VRNEAAEDFL
Sbjct: 173 LLDLFSGCGGMSTGLCLGAKVSCVDLVTRWALDSDESACQSLKLNHPETHVRNEAAEDFL 232
Query: 267 ELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPR 326
EL+KEWQKLCKR+AVN V R +K RSM+ +++ + NS +
Sbjct: 233 ELLKEWQKLCKRYAVNDVGRTHKSRSMASSMSKQNKNSSN-------------------- 272
Query: 327 VTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKVHWKGYS 386
D DI GEYEVAR+VDICYG ++ GKRGL FKVHWKGYS
Sbjct: 273 --------------------DDDIASGEYEVARLVDICYGKTDKRGKRGLKFKVHWKGYS 312
Query: 387 TSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVD 446
TSEDSWEPIEGL NC I++FVR GFKSKILPLPGD DVICGGPPCQGISGYNR+RNVD
Sbjct: 313 TSEDSWEPIEGLSNCEHSIRDFVREGFKSKILPLPGDADVICGGPPCQGISGYNRYRNVD 372
Query: 447 SPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFG 506
SPL DERN QIV+FMDIV+FLKPKYVLMENVVDIL+FDKAS RYALSRLVHMKYQAR G
Sbjct: 373 SPLADERNIQIVVFMDIVQFLKPKYVLMENVVDILRFDKASFARYALSRLVHMKYQARLG 432
Query: 507 IIAAGCYGLPQFRLR 521
+AAGCYGLPQFRLR
Sbjct: 433 TVAAGCYGLPQFRLR 447
>gi|359474666|ref|XP_002267685.2| PREDICTED: uncharacterized protein LOC100255190 [Vitis vinifera]
Length = 1789
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/521 (63%), Positives = 395/521 (75%), Gaps = 56/521 (10%)
Query: 1 WSLWLLLPHFYYFLGLFFFLNFLHGAYSDDDEDKIVSNVECHYAQARIGECIFDLGDCAY 60
W L + H Y+F +DD+E++IV+NVECHY QA++ IF+LGDCA+
Sbjct: 1040 WRYDLKVEHNYFFFS------------ADDNEEEIVTNVECHYTQAKLDGTIFNLGDCAH 1087
Query: 61 IKGEGTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDN 120
IKGEG QKH+G+ILEFFKTT+GE+YFRVQWFYRAEDTVMKE A HD+KR+F ST+MNDN
Sbjct: 1088 IKGEGEQKHVGRILEFFKTTEGEDYFRVQWFYRAEDTVMKEEAASHDKKRIFCSTIMNDN 1147
Query: 121 PVDCIISKVIVAQIPPKIGLKSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCT 180
+DCIISKV V ++ P++ LK +SIP D+Y+DM+Y VEYSTF TLL+GKI P+C
Sbjct: 1148 SLDCIISKVNVLELTPRVSLKLDSIPPFDYYYDMKYNVEYSTFHTLLSGKIS----PNCI 1203
Query: 181 ETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDS 240
ET + A +TF E+M P KAELALLDLYSGCGGMSTGLCLGAKLSC NLVT+WALD
Sbjct: 1204 ETPLSVANTTFPEDMDGCKPDKAELALLDLYSGCGGMSTGLCLGAKLSCVNLVTKWALDF 1263
Query: 241 DKSACESLKLNHPEAQVRNEAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRN 300
DKSACESLKLNHPE QVRNE AEDFL+L+KEW+ LC+++A+N+VER+++ RS R +++
Sbjct: 1264 DKSACESLKLNHPETQVRNETAEDFLDLLKEWEMLCEQYALNLVERKSQSRSNVLRTSKS 1323
Query: 301 SVNSPSITRNSVDSPKVTGNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARI 360
++N SP D+ + E E+ ++
Sbjct: 1324 NIN----------------------------------------SPHDIKVATDELEILKL 1343
Query: 361 VDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPL 420
VDICYGDP+E+GKRGL FKV WKGY SED+WEPIEGL NC E I +FVRNG KSKILP
Sbjct: 1344 VDICYGDPSETGKRGLKFKVRWKGYGPSEDTWEPIEGLSNCQEGIYDFVRNGLKSKILPR 1403
Query: 421 PGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI 480
PGDVDVICGGPPCQGISGYNRFRNVDSPL DERN QIVIFMDIV+FLKPKYVLMENVVD+
Sbjct: 1404 PGDVDVICGGPPCQGISGYNRFRNVDSPLSDERNHQIVIFMDIVKFLKPKYVLMENVVDL 1463
Query: 481 LKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
LK DKASLGRYA+SRLVHMKYQAR G+IAAGCYGLPQFRLR
Sbjct: 1464 LKLDKASLGRYAISRLVHMKYQARLGMIAAGCYGLPQFRLR 1504
>gi|255557861|ref|XP_002519960.1| protein with unknown function [Ricinus communis]
gi|223541006|gb|EEF42564.1| protein with unknown function [Ricinus communis]
Length = 734
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/472 (67%), Positives = 366/472 (77%), Gaps = 45/472 (9%)
Query: 54 DLGDCAYIKGEGTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTVMKEAADFHDRKRLFY 113
DL ++GEG QKH+G+I+EFFKTTDGE+YFRVQWFYRAEDTV+KE A FHD+KRLFY
Sbjct: 8 DLHYDQLLQGEGGQKHVGRIVEFFKTTDGEDYFRVQWFYRAEDTVIKEEAGFHDKKRLFY 67
Query: 114 STVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIHD 173
ST+MNDNP+DCIISKV + Q+P IG KS SI S+DFYFDMEY V+YS+FRTLL GK
Sbjct: 68 STIMNDNPIDCIISKVRIVQLPSMIGSKS-SIRSTDFYFDMEYNVDYSSFRTLLIGKHFC 126
Query: 174 L----SLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSC 229
L S P+ E V TT +T ENM + +KAELALLDL+SGCGGMSTGLCLGAK+SC
Sbjct: 127 LRDNSSSPNVVEAVSTTGGNTSLENMRSSESNKAELALLDLFSGCGGMSTGLCLGAKVSC 186
Query: 230 TNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQKLCKRFAVNIVERENK 289
+LVTRWALDS+KSACESLKLNHPE VRNEAAEDFLEL+K W+KLCKR+AV ++ +
Sbjct: 187 VDLVTRWALDSNKSACESLKLNHPETNVRNEAAEDFLELLKVWEKLCKRYAVKDIKSMQQ 246
Query: 290 QRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPRVTRSSVNSPRVTRNSVNSPRDVD 349
RS++ RV + NS S D D
Sbjct: 247 SRSIASRVAEENDNSLS----------------------------------------DND 266
Query: 350 IPPGEYEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFV 409
I PGEYEV+++VD+CYGDP+ GKRGL FKVHWKGYSTSED+WEP+EGLRNC E I++FV
Sbjct: 267 ITPGEYEVSKLVDLCYGDPDNIGKRGLKFKVHWKGYSTSEDTWEPVEGLRNCQECIRDFV 326
Query: 410 RNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKP 469
R GFKSKILPLPGDVDVICGGPPCQGISGYNRFRNV++PL DERNRQIV+FMDIV+FLKP
Sbjct: 327 RKGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVNAPLSDERNRQIVVFMDIVQFLKP 386
Query: 470 KYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K+VLMENVVDILKFDKAS RYALSRLVHMKYQAR G IAAGCYGLPQFRLR
Sbjct: 387 KFVLMENVVDILKFDKASFARYALSRLVHMKYQARLGTIAAGCYGLPQFRLR 438
>gi|356560887|ref|XP_003548718.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Glycine
max]
Length = 1143
Score = 635 bits (1637), Expect = e-179, Method: Compositional matrix adjust.
Identities = 310/495 (62%), Positives = 373/495 (75%), Gaps = 44/495 (8%)
Query: 28 SDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIKGEGTQKHIGKILEFFKTTDGEEYFR 87
++ +ED+I++NV+CHYAQA IG CIF LGDCA++KGEG +KH+GKI+EFF+TTDG+ YFR
Sbjct: 353 NEGEEDEIIANVKCHYAQAEIGNCIFSLGDCAFVKGEGEEKHVGKIIEFFQTTDGQNYFR 412
Query: 88 VQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPS 147
VQWFYR +DTV+++ FHD++R+FYS +MNDN +DCI+ K V I P++GLK SI S
Sbjct: 413 VQWFYRIQDTVVQDEGGFHDKRRVFYSAIMNDNLIDCIMGKANVTHITPRVGLKLASISS 472
Query: 148 SDFYFDMEYCVEYSTFRTLLTG-KIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELA 206
SDFY+DMEYCV+YSTFRTL K ++LS PS E++ T A ST E+ P +K ELA
Sbjct: 473 SDFYYDMEYCVDYSTFRTLNNPVKTNELSPPSVLESLSTDA-STVTESQPCSELNKTELA 531
Query: 207 LLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFL 266
LLDLYSGCGGMSTGLCLGAK + NLVTRWA+DSD+SA ESLKLNH + VRNE+AEDFL
Sbjct: 532 LLDLYSGCGGMSTGLCLGAKTASVNLVTRWAVDSDRSAGESLKLNHSDTHVRNESAEDFL 591
Query: 267 ELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPR 326
EL+K W+KLCKR+ V+ ER+ RS NS + +
Sbjct: 592 ELLKAWEKLCKRYNVSSTERKLPFRS---------------------------NSSGAKK 624
Query: 327 VTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKVHWKGYS 386
S V+ +I GE EV+++VDIC+GDPNE+GKRGL KVHWKGYS
Sbjct: 625 RGNSEVH---------------EISDGELEVSKLVDICFGDPNETGKRGLYLKVHWKGYS 669
Query: 387 TSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVD 446
SED+WEPI+ L C E +++FVR G KS ILPLPG+VDVICGGPPCQGISGYNRFRN
Sbjct: 670 ASEDTWEPIKSLSKCKESMQDFVRKGMKSNILPLPGEVDVICGGPPCQGISGYNRFRNCA 729
Query: 447 SPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFG 506
SPLDDERNRQIVIFMD+V+FLKP+YVLMENVVDIL+FDK SLGRYALSRLVHM YQAR G
Sbjct: 730 SPLDDERNRQIVIFMDMVKFLKPRYVLMENVVDILRFDKGSLGRYALSRLVHMNYQARLG 789
Query: 507 IIAAGCYGLPQFRLR 521
IIAAGCYGLPQFRLR
Sbjct: 790 IIAAGCYGLPQFRLR 804
>gi|449456909|ref|XP_004146191.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Cucumis
sativus]
gi|449512953|ref|XP_004164187.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Cucumis
sativus]
Length = 1243
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 308/495 (62%), Positives = 359/495 (72%), Gaps = 53/495 (10%)
Query: 28 SDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIKGEGTQKHIGKILEFFKTTDGEEYFR 87
SDDDED IV NV+CHY QA IG +F LGDC YIKGEG + H+G I+EFFKTTDG+ YFR
Sbjct: 507 SDDDEDMIVVNVDCHYTQANIGNTVFSLGDCVYIKGEGEKNHVGTIIEFFKTTDGDNYFR 566
Query: 88 VQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPS 147
QWFYR EDTV++E FHD +RLFYSTVMNDNP+DCI+SKV + ++ P++G KSNS S
Sbjct: 567 GQWFYRVEDTVIQEEGAFHDPRRLFYSTVMNDNPLDCIVSKVNIKRVKPRVGQKSNSASS 626
Query: 148 SDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELAL 207
DFY+DMEYCVEYSTFRTL G+ S +C +T T+TS FENMP KAEL L
Sbjct: 627 YDFYYDMEYCVEYSTFRTLKNGE----SPTNCIDTPHVTSTSNTFENMPK----KAELEL 678
Query: 208 LDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLE 267
LDL+SGCGGMSTGLCLGAKLS +L++RWA+DS SACESL+LNHPE VRNE AEDFL+
Sbjct: 679 LDLFSGCGGMSTGLCLGAKLSSIDLISRWAVDSHMSACESLRLNHPETHVRNETAEDFLD 738
Query: 268 LVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPRV 327
L+KEW+KLC+R+ N E ++ RS +
Sbjct: 739 LLKEWEKLCRRYKANESEGSHQLRSKAN-------------------------------- 766
Query: 328 TRSSVNSPRVTRNSVNSPRDVD-IPPGEYEVARIVDICYGDPNESGKRGLNFKVHWKGYS 386
+ + S D D P E+EV+ +VDICYGDP +GKRGL F V WKGY
Sbjct: 767 ------------DYLTSSDDEDEFPTSEFEVSSLVDICYGDPTRTGKRGLMFLVRWKGYG 814
Query: 387 TSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVD 446
SED+WEPIEGL NC E I+ FV+ G KILPLPGDVDVICGGPPCQGISGYNRFRN D
Sbjct: 815 PSEDTWEPIEGLSNCQEAIQNFVKRGLGEKILPLPGDVDVICGGPPCQGISGYNRFRNTD 874
Query: 447 SPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFG 506
P+DDERNRQIVIFMDIV+FLKPKYVLMENV DIL+F++ASLGRYA+SRLVHM YQAR G
Sbjct: 875 CPMDDERNRQIVIFMDIVKFLKPKYVLMENVTDILRFNQASLGRYAVSRLVHMNYQARLG 934
Query: 507 IIAAGCYGLPQFRLR 521
IAAGC+GLPQFRLR
Sbjct: 935 TIAAGCFGLPQFRLR 949
>gi|296088422|emb|CBI37413.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust.
Identities = 306/460 (66%), Positives = 359/460 (78%), Gaps = 40/460 (8%)
Query: 62 KGEGTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNP 121
+GEG QKH+G+ILEFFKTT+GE+YFRVQWFYRAEDTVMKE A HD+KR+F ST+MNDN
Sbjct: 25 QGEGEQKHVGRILEFFKTTEGEDYFRVQWFYRAEDTVMKEEAASHDKKRIFCSTIMNDNS 84
Query: 122 VDCIISKVIVAQIPPKIGLKSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTE 181
+DCIISKV V ++ P++ LK +SIP D+Y+DM+Y VEYSTF TLL+ K +DL P+C E
Sbjct: 85 LDCIISKVNVLELTPRVSLKLDSIPPFDYYYDMKYNVEYSTFHTLLSVKGYDLVSPNCIE 144
Query: 182 TVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSD 241
T + A +TF E+M P KAELALLDLYSGCGGMSTGLCLGAKLSC NLVT+WALD D
Sbjct: 145 TPLSVANTTFPEDMDGCKPDKAELALLDLYSGCGGMSTGLCLGAKLSCVNLVTKWALDFD 204
Query: 242 KSACESLKLNHPEAQVRNEAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNS 301
KSACESLKLNHPE QVRNE AEDFL+L+KEW+ LC+++A+N+VER+++ RS R ++++
Sbjct: 205 KSACESLKLNHPETQVRNETAEDFLDLLKEWEMLCEQYALNLVERKSQSRSNVLRTSKSN 264
Query: 302 VNSPSITRNSVDSPKVTGNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIV 361
+N SP D+ + E E+ ++V
Sbjct: 265 IN----------------------------------------SPHDIKVATDELEILKLV 284
Query: 362 DICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLP 421
DICYGDP+E+GKRGL FKV WKGY SED+WEPIEGL NC E I +FVRNG KSKILP P
Sbjct: 285 DICYGDPSETGKRGLKFKVRWKGYGPSEDTWEPIEGLSNCQEGIYDFVRNGLKSKILPRP 344
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
GDVDVICGGPPCQGISGYNRFRNVDSPL DERN QIVIFMDIV+FLKPKYVLMENVVD+L
Sbjct: 345 GDVDVICGGPPCQGISGYNRFRNVDSPLSDERNHQIVIFMDIVKFLKPKYVLMENVVDLL 404
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K DKASLGRYA+SRLVHMKYQAR G+IAAGCYGLPQFRLR
Sbjct: 405 KLDKASLGRYAISRLVHMKYQARLGMIAAGCYGLPQFRLR 444
>gi|297737359|emb|CBI26560.3| unnamed protein product [Vitis vinifera]
Length = 847
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 297/497 (59%), Positives = 357/497 (71%), Gaps = 46/497 (9%)
Query: 29 DDDEDKIVSNVECHYAQARIGECIFDLGDCAYIKG-EGTQKHIGKILEFFKTTDGEEYFR 87
DD+ED++V +V+CHY+QA I +CIF+LGDCAY+K +G + +IG+ILEFFKT D E+YFR
Sbjct: 98 DDEEDELVLDVKCHYSQAEIEKCIFNLGDCAYVKASKGGRNYIGRILEFFKTMDDEDYFR 157
Query: 88 VQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPS 147
VQWF+R EDTVM+E FH++KRLFYS ++NDN +DCI+SKV + QI P + LKS SI
Sbjct: 158 VQWFFRPEDTVMEEEGAFHEKKRLFYSNLVNDNLLDCIVSKVNIIQITPSVNLKSKSILP 217
Query: 148 SDFYFDMEYCVEYSTFRTLLTGKIHD---LSLPSCTETVPTTATSTFFENMPNHGPHKAE 204
DFY+DM+Y ++YSTF T+ D LS +C +TV F M +H P+K E
Sbjct: 218 CDFYYDMKYLIDYSTFCTMEVDNSADRTNLSTSACLKTVHMNGIKPEFNRMSSHKPYKPE 277
Query: 205 LALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAED 264
LALLD+YSGCGGMSTGLCLGAKLS +LVTRWALD +KSACESLKLNHPE Q+RNE+AED
Sbjct: 278 LALLDIYSGCGGMSTGLCLGAKLSGVDLVTRWALDINKSACESLKLNHPETQIRNESAED 337
Query: 265 FLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDS 324
FL+L+KEW KLCKR+ V V+ K VNS
Sbjct: 338 FLDLLKEWDKLCKRYVVKDVQESLK------------VNS-------------------- 365
Query: 325 PRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKVHWKG 384
RV R++ VNS P GE+EVA ++DICYGDP SGK GL F+ W G
Sbjct: 366 -RVLRAA---------KVNSKTGNKSPSGEFEVASLIDICYGDPTNSGKHGLKFQARWAG 415
Query: 385 YSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRN 444
+ SED+WEPIEGL C + I++FV GFK+KILP PGD DVICGGPPCQGISGYNR RN
Sbjct: 416 HGPSEDTWEPIEGLSKCQDLIQDFVLKGFKAKILPRPGDADVICGGPPCQGISGYNRHRN 475
Query: 445 VDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQAR 504
DSP DDERNRQI++FMDIV FLKPKYVLMENVVDIL+F K S+GRYALSRLV M YQAR
Sbjct: 476 ADSPFDDERNRQIIVFMDIVNFLKPKYVLMENVVDILQFAKGSVGRYALSRLVRMNYQAR 535
Query: 505 FGIIAAGCYGLPQFRLR 521
GI+AAGCYGLPQ+RLR
Sbjct: 536 LGIMAAGCYGLPQYRLR 552
>gi|42566945|ref|NP_193637.2| chromomethylase 2 [Arabidopsis thaliana]
gi|322510132|sp|Q94F87.3|CMT2_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase CMT2; AltName:
Full=Chromomethylase 2; AltName: Full=Protein
CHROMOMETHYLASE 2
gi|332658726|gb|AEE84126.1| chromomethylase 2 [Arabidopsis thaliana]
Length = 1295
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 299/498 (60%), Positives = 360/498 (72%), Gaps = 45/498 (9%)
Query: 24 HGAYSDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIKGEGTQKHIGKILEFFKTTDGE 83
G S+DDEDKIV+NVECHY+QA++ F LGD AYIKGE + H+G+I+EFFKTTDGE
Sbjct: 551 RGQQSEDDEDKIVANVECHYSQAKVDGHTFSLGDFAYIKGEEEETHVGQIVEFFKTTDGE 610
Query: 84 EYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSN 143
YFRVQWFYRA DT+M+ A HD++RLFYSTVMNDNPVDC+ISKV V Q+ P++GLK N
Sbjct: 611 SYFRVQWFYRATDTIMERQATNHDKRRLFYSTVMNDNPVDCLISKVTVLQVSPRVGLKPN 670
Query: 144 SIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKA 203
SI SD+YFDMEYCVEYSTF+TL K + L C + VPT +T + + G
Sbjct: 671 SI-KSDYYFDMEYCVEYSTFQTLRNPKTSENKLECCADVVPTESTESILKKKSFSG---- 725
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
EL +LDLYSGCGGMSTGL LGAK+S ++VT+WA+D + +AC+SLKLNHP QVRN+AA
Sbjct: 726 ELPVLDLYSGCGGMSTGLSLGAKISGVDVVTKWAVDQNTAACKSLKLNHPNTQVRNDAAG 785
Query: 264 DFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVD 323
DFL+L+KEW KLCKR+ N N QR+ + R
Sbjct: 786 DFLQLLKEWDKLCKRYVFN-----NDQRTDTLR--------------------------- 813
Query: 324 SPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKVHWK 383
SVNS + T S +S D EYEV ++VDIC+GD +++GK GL FKVHWK
Sbjct: 814 -------SVNSTKETSGSSSSSDDDSDSE-EYEVEKLVDICFGDHDKTGKNGLKFKVHWK 865
Query: 384 GYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFR 443
GY + ED+WE E L NC + I+EFV +GFKSKILPLPG V VICGGPPCQGISGYNR R
Sbjct: 866 GYRSDEDTWELAEELSNCQDAIREFVTSGFKSKILPLPGRVGVICGGPPCQGISGYNRHR 925
Query: 444 NVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQA 503
NVDSPL+DERN+QI++FMDIVE+LKP YVLMENVVDIL+ DK SLGRYALSRLV+M+YQA
Sbjct: 926 NVDSPLNDERNQQIIVFMDIVEYLKPSYVLMENVVDILRMDKGSLGRYALSRLVNMRYQA 985
Query: 504 RFGIIAAGCYGLPQFRLR 521
R GI+ AGCYGL QFR R
Sbjct: 986 RLGIMTAGCYGLSQFRSR 1003
>gi|297804242|ref|XP_002870005.1| chromomethylase 2 [Arabidopsis lyrata subsp. lyrata]
gi|297315841|gb|EFH46264.1| chromomethylase 2 [Arabidopsis lyrata subsp. lyrata]
Length = 1253
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 303/498 (60%), Positives = 356/498 (71%), Gaps = 45/498 (9%)
Query: 24 HGAYSDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIKGEGTQKHIGKILEFFKTTDGE 83
G S+DDEDKIV+NVECHY QA++ F LGD A IKGE + H+GKILEFFKTTD E
Sbjct: 509 RGQQSEDDEDKIVANVECHYLQAKVDGHTFSLGDFACIKGEEEETHVGKILEFFKTTDEE 568
Query: 84 EYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSN 143
YFRVQWFYRA DTVMK+ A HD+KRLFYSTVMNDNPVDC+ISKV V Q+ P GLK N
Sbjct: 569 SYFRVQWFYRATDTVMKQQATNHDKKRLFYSTVMNDNPVDCLISKVTVLQVSPMAGLKPN 628
Query: 144 SIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKA 203
SI SD+YFDMEYCVEYSTF+TL K + L C + VPT +T + + G
Sbjct: 629 SI-KSDYYFDMEYCVEYSTFQTLKNPKSSENKLECCADVVPTESTESILKKKIFSG---- 683
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
EL +LDLYSGCGGMSTGL LGAK+S ++VT+WA+D + +ACESLKLNHP QVRN+AA
Sbjct: 684 ELPVLDLYSGCGGMSTGLSLGAKISGVDVVTKWAVDQNMAACESLKLNHPNTQVRNDAAG 743
Query: 264 DFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVD 323
DFL+L+KEW KLCKR+ N N QR+ + R SV+S K T S
Sbjct: 744 DFLQLLKEWDKLCKRYVFN-----NDQRTDTLR--------------SVNSIKETSESSS 784
Query: 324 SPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKVHWK 383
S S YEV ++VDIC+GDP+++GK GL FKVHWK
Sbjct: 785 SRDDDSDSEE---------------------YEVEKLVDICFGDPDKTGKNGLKFKVHWK 823
Query: 384 GYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFR 443
GY + ED+WE E L NC + I+EFV +GFKSKILPLPG V VICGGPPCQGISGYNR+R
Sbjct: 824 GYRSDEDTWELAEELSNCQDAIREFVTSGFKSKILPLPGCVGVICGGPPCQGISGYNRYR 883
Query: 444 NVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQA 503
NVDSPL+DERN+QI++FMDIVE+LKP YVLMENVVDIL+ DK SLGRYALSRLV+M+YQA
Sbjct: 884 NVDSPLNDERNQQIIVFMDIVEYLKPSYVLMENVVDILRLDKGSLGRYALSRLVNMRYQA 943
Query: 504 RFGIIAAGCYGLPQFRLR 521
R GI+ AGCYGL QFR R
Sbjct: 944 RLGIMTAGCYGLSQFRSR 961
>gi|226088552|dbj|BAH37021.1| chromomethylase OsMET2c [Oryza sativa Japonica Group]
Length = 749
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 254/491 (51%), Positives = 326/491 (66%), Gaps = 49/491 (9%)
Query: 34 KIVSNVECHYAQARIGECIFDLGDCAYIKG-EGTQKHIGKILEFFKTTDGEEYFRVQWFY 92
K V +V+CHY QA++ F +G+CA++KG EG +IG++LEFF+T GE YFRVQWF+
Sbjct: 41 KAVLDVKCHYLQAKVSRYTFCIGECAFVKGPEGKPNYIGRLLEFFETKTGECYFRVQWFF 100
Query: 93 RAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDFYF 152
AEDTV+ E A HD +RLFYS + +DN +DCI+SKV + Q+PP + KS S+PSSD+Y+
Sbjct: 101 TAEDTVIGEQAQSHDPRRLFYSDLTDDNLLDCIVSKVTIVQVPPSVDGKSKSVPSSDYYY 160
Query: 153 DMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGP--HKAELALLDL 210
DM+Y ++YSTF T+ DL + SC + N + P K EL+LLDL
Sbjct: 161 DMKYSIDYSTFSTIEMEDTDDL-MQSCYTSRINDKMKKIDVNKKHKSPVLEKMELSLLDL 219
Query: 211 YSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVK 270
Y GCGGMSTGLCLGA+ NL RWA+D D+ ACES + NHPE +VRNE +DFLEL+K
Sbjct: 220 YCGCGGMSTGLCLGARGGGVNLSARWAIDDDEIACESFRNNHPETRVRNETTDDFLELLK 279
Query: 271 EWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPRVTRS 330
EW+KLCK + + S T+ VDS
Sbjct: 280 EWEKLCKTYVKH-----------------------SRTKACVDS---------------- 300
Query: 331 SVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSED 390
T ++ +P +PP E+EV ++VDIC+GDPN+ K GL FKV WKGY D
Sbjct: 301 ------TTESNNETPDCSTVPPEEFEVWKLVDICFGDPNKVSKHGLYFKVRWKGYGPHHD 354
Query: 391 SWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLD 450
+WEP+EGLRNC E I++FV G + +ILP PGDVDV+CGGPPCQGISGYNR R ++P
Sbjct: 355 TWEPVEGLRNCKEAIRDFVIEGHRQRILPRPGDVDVVCGGPPCQGISGYNRNREFEAPFK 414
Query: 451 DERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAA 510
E+N+QI++FMD+V+FLKPKYV MENV+DILKF A+L RYALSRLV M YQAR GI+AA
Sbjct: 415 CEKNKQIIVFMDVVQFLKPKYVYMENVLDILKFADATLARYALSRLVAMHYQARLGIMAA 474
Query: 511 GCYGLPQFRLR 521
GCYGLPQFR+R
Sbjct: 475 GCYGLPQFRMR 485
>gi|297739809|emb|CBI29991.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/490 (51%), Positives = 313/490 (63%), Gaps = 47/490 (9%)
Query: 42 HYAQARIGECIFDLGDCAYIKGE-GTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTVMK 100
H+ +A + CI+ L D AY+K E G I KI+E F+T D E YF QWF+RAEDTV+K
Sbjct: 79 HFTEAVVDGCIYKLYDYAYVKAEDGQPDFIAKIVELFETIDREPYFTAQWFFRAEDTVIK 138
Query: 101 EAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGL--KSNSIPSSDFYFDMEYCV 158
+ A D+KR+FYS + +DNP+DCI+SKV + Q+ P + L K +IP D Y+DM Y +
Sbjct: 139 DHAHLVDQKRVFYSDMRDDNPLDCIVSKVEIVQVAPNVDLAEKEKTIPPCDLYYDMSYSL 198
Query: 159 EYSTFRTLLTGKIHDLSLPSCTETVPTTATST-------FFENMPNHGPHKAELALLDLY 211
++ TF LLT S S T + ST E+ H + + LLDLY
Sbjct: 199 KHLTFANLLTENSRTESDESSTISSEIGLNSTTDGINSAIGESSQVHKFQGSGMTLLDLY 258
Query: 212 SGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKE 271
SGCG MSTGLCLGA LS LVTRWA+D + ACESLKLNHPE +VRNEAAEDFL L+KE
Sbjct: 259 SGCGAMSTGLCLGASLSGLKLVTRWAVDINPHACESLKLNHPETEVRNEAAEDFLSLLKE 318
Query: 272 WQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPRVTRSS 331
W LC+ F++ R P+V +P RS
Sbjct: 319 WATLCEDFSLLGSRR----------------------------PEVV-----NPISNRSG 345
Query: 332 VNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSEDS 391
+ SP +P GE+EV ++V ICYGDPNE K GL FKV WKGY S+D+
Sbjct: 346 SDDEEDADGDDGSP----VPRGEFEVKKLVAICYGDPNEINKPGLYFKVRWKGYGPSDDT 401
Query: 392 WEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDD 451
WEPIEGL C + +KEFV+ G++S ILPLPGDVD ICGGPPCQG+SG+NRFRN ++PLDD
Sbjct: 402 WEPIEGLSKCKKSVKEFVKKGYRSSILPLPGDVDFICGGPPCQGVSGFNRFRNTEAPLDD 461
Query: 452 ERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAG 511
+N Q+V+FMDIV +LKPKYVLMENVVDILKF LGRYA+ RLV M YQAR G++AAG
Sbjct: 462 PKNHQLVVFMDIVNYLKPKYVLMENVVDILKFAGGFLGRYAMGRLVSMNYQARLGMMAAG 521
Query: 512 CYGLPQFRLR 521
YG+PQ+R+R
Sbjct: 522 SYGVPQYRMR 531
>gi|225441510|ref|XP_002275932.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Vitis
vinifera]
Length = 829
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/490 (51%), Positives = 313/490 (63%), Gaps = 47/490 (9%)
Query: 42 HYAQARIGECIFDLGDCAYIKGE-GTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTVMK 100
H+ +A + CI+ L D AY+K E G I KI+E F+T D E YF QWF+RAEDTV+K
Sbjct: 81 HFTEAVVDGCIYKLYDYAYVKAEDGQPDFIAKIVELFETIDREPYFTAQWFFRAEDTVIK 140
Query: 101 EAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGL--KSNSIPSSDFYFDMEYCV 158
+ A D+KR+FYS + +DNP+DCI+SKV + Q+ P + L K +IP D Y+DM Y +
Sbjct: 141 DHAHLVDQKRVFYSDMRDDNPLDCIVSKVEIVQVAPNVDLAEKEKTIPPCDLYYDMSYSL 200
Query: 159 EYSTFRTLLTGKIHDLSLPSCTETVPTTATST-------FFENMPNHGPHKAELALLDLY 211
++ TF LLT S S T + ST E+ H + + LLDLY
Sbjct: 201 KHLTFANLLTENSRTESDESSTISSEIGLNSTTDGINSAIGESSQVHKFQGSGMTLLDLY 260
Query: 212 SGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKE 271
SGCG MSTGLCLGA LS LVTRWA+D + ACESLKLNHPE +VRNEAAEDFL L+KE
Sbjct: 261 SGCGAMSTGLCLGASLSGLKLVTRWAVDINPHACESLKLNHPETEVRNEAAEDFLSLLKE 320
Query: 272 WQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPRVTRSS 331
W LC+ F++ R P+V +P RS
Sbjct: 321 WATLCEDFSLLGSRR----------------------------PEVV-----NPISNRSG 347
Query: 332 VNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSEDS 391
+ SP +P GE+EV ++V ICYGDPNE K GL FKV WKGY S+D+
Sbjct: 348 SDDEEDADGDDGSP----VPRGEFEVKKLVAICYGDPNEINKPGLYFKVRWKGYGPSDDT 403
Query: 392 WEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDD 451
WEPIEGL C + +KEFV+ G++S ILPLPGDVD ICGGPPCQG+SG+NRFRN ++PLDD
Sbjct: 404 WEPIEGLSKCKKSVKEFVKKGYRSSILPLPGDVDFICGGPPCQGVSGFNRFRNTEAPLDD 463
Query: 452 ERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAG 511
+N Q+V+FMDIV +LKPKYVLMENVVDILKF LGRYA+ RLV M YQAR G++AAG
Sbjct: 464 PKNHQLVVFMDIVNYLKPKYVLMENVVDILKFAGGFLGRYAMGRLVSMNYQARLGMMAAG 523
Query: 512 CYGLPQFRLR 521
YG+PQ+R+R
Sbjct: 524 SYGVPQYRMR 533
>gi|14583094|gb|AAK69757.1|AF383171_1 chromomethylase CMT2 [Arabidopsis thaliana]
Length = 1244
Score = 483 bits (1243), Expect = e-133, Method: Compositional matrix adjust.
Identities = 251/439 (57%), Positives = 304/439 (69%), Gaps = 49/439 (11%)
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
R+Q Y+ +M+ A HD++RLFYSTVMNDNPVDC+ISKV V Q+ P+ GLK NSI
Sbjct: 559 RIQCVYKFFSFIMERQATNHDKRRLFYSTVMNDNPVDCLISKVTVLQVSPRAGLKPNSI- 617
Query: 147 SSDFYFDMEYCVEYSTFRTL----LTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHK 202
SD+YFDMEYCVEYSTF+TL + K + L + VPT +T + + G
Sbjct: 618 KSDYYFDMEYCVEYSTFQTLRNRKCSSKTSENKLECWADVVPTESTESILKKKSFSG--- 674
Query: 203 AELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAA 262
EL +LDLYSGCGGMSTGL LGAK+S ++VT+WA+D + +AC+SLKLNHP QVRN+AA
Sbjct: 675 -ELPVLDLYSGCGGMSTGLSLGAKISGVDVVTKWAVDQNTAACKSLKLNHPNTQVRNDAA 733
Query: 263 EDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSV 322
DFL+L+KEW KLCKR+ N N QR+ + R SV+S K T S
Sbjct: 734 GDFLQLLKEWDKLCKRYVFN-----NDQRTDTLR--------------SVNSTKETSESS 774
Query: 323 DSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKVHW 382
S S EYEV ++VDIC+GDP+++GK GL FKVHW
Sbjct: 775 SSSDDDSDSE---------------------EYEVEKLVDICFGDPDKTGKNGLKFKVHW 813
Query: 383 KGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRF 442
KGY + ED+WE E L NC + I+EFV +GFKSKILPLPG V VICGGPPCQGISGYNR
Sbjct: 814 KGYRSDEDTWELAEELSNCQDAIREFVTSGFKSKILPLPGRVGVICGGPPCQGISGYNRH 873
Query: 443 RNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQ 502
RNVDSPL+DERN+QI++FMDIVE+LKP YVLMENVVDIL+ DK SLGRYALSRLV+M+YQ
Sbjct: 874 RNVDSPLNDERNQQIIVFMDIVEYLKPSYVLMENVVDILRMDKGSLGRYALSRLVNMRYQ 933
Query: 503 ARFGIIAAGCYGLPQFRLR 521
AR GI+ AGCYGL QFR R
Sbjct: 934 ARLGIMTAGCYGLSQFRSR 952
>gi|159461700|gb|ABW96889.1| CMT-type DNA-methyltransferase [Elaeis guineensis]
Length = 925
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 257/510 (50%), Positives = 325/510 (63%), Gaps = 52/510 (10%)
Query: 23 LHGAYSDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIK-GEGTQKHIGKILEFFKTTD 81
L A S +++ V HY QA + I++L D AYIK G+G +IG+I+EFF+TTD
Sbjct: 158 LASASSKKSDEEEVLKARRHYWQAMVDNVIYNLNDDAYIKAGDGEPDYIGRIVEFFETTD 217
Query: 82 GEEYFRVQWFYRAEDTVMKEAAD----FHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPK 137
G+ YF QWF+RAEDTV+KE A HD +R+F S NDN +DCI+SK+ + ++
Sbjct: 218 GQLYFAAQWFFRAEDTVIKEIAHDPKTVHDPRRVFLSEEKNDNVLDCIVSKIRIVRVESN 277
Query: 138 IGLKS--NSIPSSDFYFDMEYCVEYSTFRTL----LTGKIHDLSLPSCTETVPTTATSTF 191
I LK+ +SIP D Y+DM Y + YSTF L L S S +
Sbjct: 278 IDLKAKEDSIPPCDLYYDMSYSLSYSTFGNLPPESLRAGSETSSTISSEDASNVCKGKCQ 337
Query: 192 FENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLN 251
++ + K L+LLDLYSGCG MSTGLCLGA LS L TRWA+D + ACESLKLN
Sbjct: 338 SDSEASSSGEKRVLSLLDLYSGCGAMSTGLCLGANLSGLKLETRWAVDINPYACESLKLN 397
Query: 252 HPEAQVRNEAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNS 311
HP +VRNE AEDFL L++EW+KLC +F N++ M + S +S S
Sbjct: 398 HPHTEVRNEKAEDFLALLREWEKLCAKF--NLI-------GMESSFAQGSESSGS----- 443
Query: 312 VDSPKVTGNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNES 371
+ D R++ ++P GE+EV ++V ICYGDP+
Sbjct: 444 --------DDEDESRIS-------------------TEVPRGEFEVGKLVGICYGDPSNI 476
Query: 372 GKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGP 431
GK GL FKV WKGY SED+WEPI+GL C ERIK+FV+NG+K ILPLPG VDVICGGP
Sbjct: 477 GKVGLKFKVRWKGYGPSEDTWEPIDGLSKCQERIKDFVQNGYKKNILPLPGKVDVICGGP 536
Query: 432 PCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRY 491
PCQGISG+NRFRN ++PL+D +N+Q+V+FMDIV+FLKPKYVLMENVVDILKF L RY
Sbjct: 537 PCQGISGFNRFRNYNAPLEDPKNQQMVVFMDIVDFLKPKYVLMENVVDILKFAHGFLLRY 596
Query: 492 ALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
ALSRLV M YQAR G++ AGCYGLPQFR+R
Sbjct: 597 ALSRLVAMNYQARLGMMVAGCYGLPQFRMR 626
>gi|218196311|gb|EEC78738.1| hypothetical protein OsI_18945 [Oryza sativa Indica Group]
Length = 1325
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/476 (50%), Positives = 304/476 (63%), Gaps = 64/476 (13%)
Query: 64 EGTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVD 123
EG +IG++LEFF+T GE YFRVQWF+ AEDTV+ E A HD +RLFYS + +DN +D
Sbjct: 606 EGKPNYIGRLLEFFETKTGECYFRVQWFFTAEDTVIGEQAQSHDPRRLFYSDLTDDNLLD 665
Query: 124 CIISKVIVAQIPPKIGLKSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETV 183
CI+SKV + Q+PP + KS S+PSSD+Y+DM+Y ++YSTF T+ DL + SC +
Sbjct: 666 CIVSKVTIVQVPPSVDGKSKSVPSSDYYYDMKYSIDYSTFSTIEMEDTDDL-MQSCYTSR 724
Query: 184 PTTATSTFFENMPNHGP--HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSD 241
N + P K EL+LLDLY GCGGMSTGLCLGA+ NL RWA+D D
Sbjct: 725 INDKMKKIDVNKKHKSPVLEKMELSLLDLYCGCGGMSTGLCLGARGGGVNLSARWAIDDD 784
Query: 242 KSACESLKLNHPEAQVRNEAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNS 301
+ ACES + NHPE +VRNE +DFLEL+KEW+KLCK + +
Sbjct: 785 EIACESFRNNHPETRVRNETTDDFLELLKEWEKLCKTYVKH------------------- 825
Query: 302 VNSPSITRNSVDSPKVTGNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIV 361
S T+ VDS T ++ +P +PP E+EV ++V
Sbjct: 826 ----SRTKACVDS----------------------TTESNNETPDCSTVPPEEFEVWKLV 859
Query: 362 DICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLP 421
DIC+GDPN+ K GL FKV WKGY D+WEP+EGLRNC E I++FV G + +ILP P
Sbjct: 860 DICFGDPNKVSKHGLYFKVRWKGYGPHHDTWEPVEGLRNCKEAIRDFVIEGHRQRILPRP 919
Query: 422 ----------------GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVE 465
GDVDV+CGGPPCQGISGYNR R ++P E+N+QI++FMD+V+
Sbjct: 920 RRNIAVFLLRPSKFPLGDVDVVCGGPPCQGISGYNRNREFEAPFKCEKNKQIIVFMDVVQ 979
Query: 466 FLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
FLKPKYV MENV+DILKF A+L RYALSRLV M YQAR GI+AAGCYGLPQFR+R
Sbjct: 980 FLKPKYVYMENVLDILKFADATLARYALSRLVAMHYQARLGIMAAGCYGLPQFRMR 1035
>gi|357120080|ref|XP_003561758.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like
[Brachypodium distachyon]
Length = 782
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 240/487 (49%), Positives = 316/487 (64%), Gaps = 47/487 (9%)
Query: 36 VSNVECHYAQARIGECIFDLGDCAYIKG-EGTQKHIGKILEFFKTTDGEEYFRVQWFYRA 94
V +V+CHY QA + +GDCA++KG EG +I +ILEFF+T GE Y RVQWF+RA
Sbjct: 49 VLDVKCHYLQASVSGSTLCVGDCAFVKGPEGRPNYISRILEFFETVAGECYCRVQWFFRA 108
Query: 95 EDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDFYFDM 154
EDTVM++ A +D +RLFYS + +D +DCI+SK+ + Q+PP + +S SIPSS +Y+DM
Sbjct: 109 EDTVMEDQAQSNDPRRLFYSDLQDDYSLDCIVSKLTIVQVPPCVDKESKSIPSSQYYYDM 168
Query: 155 EYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGC 214
+Y ++YSTF TL + + S ++ F + + P+K +L+LLDLY GC
Sbjct: 169 KYSLDYSTFSTLEMEDTNAILQSSHASSIEMKKVD-FSKKQKSPVPNKKDLSLLDLYCGC 227
Query: 215 GGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQK 274
GGMSTGLCLGA + NLV +WA+D D ACES +LNHPE +VRNE DFL L+KEWQK
Sbjct: 228 GGMSTGLCLGAHGAGVNLVKKWAVDDDLVACESYRLNHPETRVRNETTNDFLLLLKEWQK 287
Query: 275 LCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPRVTRSSVNS 334
LCK++ + Q ++ + + T N +
Sbjct: 288 LCKKY-------------VEQSEVKDHADGLTETINEI---------------------- 312
Query: 335 PRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEP 394
P D P E EV ++VDIC+GDPN L+FKV WKGY ++D+WEP
Sbjct: 313 ----------PDDSVDPTEELEVWKLVDICFGDPNGIENHCLHFKVRWKGYGRNDDTWEP 362
Query: 395 IEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERN 454
I+GL NC E I++FV G K KILPLPGDVDV+CGGPPCQGISGYNR R D+ E N
Sbjct: 363 IDGLGNCNEAIRDFVIEGHKRKILPLPGDVDVVCGGPPCQGISGYNRNREFDAQFKCEEN 422
Query: 455 RQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYG 514
++I+ FMD+++FLKPKYV MENV+DILKF A+L RYALSRLV M+YQA+ GI+AAGCYG
Sbjct: 423 KEIIFFMDVMQFLKPKYVYMENVLDILKFADATLARYALSRLVAMRYQAKLGIMAAGCYG 482
Query: 515 LPQFRLR 521
+PQFR+R
Sbjct: 483 VPQFRMR 489
>gi|2832630|emb|CAA16759.1| putative protein [Arabidopsis thaliana]
gi|7268696|emb|CAB78904.1| putative protein [Arabidopsis thaliana]
Length = 1171
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 252/464 (54%), Positives = 307/464 (66%), Gaps = 74/464 (15%)
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
R+Q Y+ +M+ A HD++RLFYSTVMNDNPVDC+ISKV V Q+ P++GLK NSI
Sbjct: 559 RIQCVYKFFSFIMERQATNHDKRRLFYSTVMNDNPVDCLISKVTVLQVSPRVGLKPNSI- 617
Query: 147 SSDFYFDMEYCVEYSTFRTL----LTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHK 202
SD+YFDMEYCVEYSTF+TL + K + L C + VPT +T + + G
Sbjct: 618 KSDYYFDMEYCVEYSTFQTLRNRKCSSKTSENKLECCADVVPTESTESILKKKSFSG--- 674
Query: 203 AELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAA 262
EL +LDLYSGCGGMSTGL LGAK+S ++VT+WA+D + +AC+SLKLNHP QVRN+AA
Sbjct: 675 -ELPVLDLYSGCGGMSTGLSLGAKISGVDVVTKWAVDQNTAACKSLKLNHPNTQVRNDAA 733
Query: 263 EDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSV 322
DFL+L+KEW KLCKR+ N N QR+ + R
Sbjct: 734 GDFLQLLKEWDKLCKRYVFN-----NDQRTDTLR-------------------------- 762
Query: 323 DSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKVHW 382
SVNS + T S +S D EYEV ++VDIC+GD +++GK GL FKVHW
Sbjct: 763 --------SVNSTKETSGSSSSSDDDSDSE-EYEVEKLVDICFGDHDKTGKNGLKFKVHW 813
Query: 383 KGYSTSEDSWEPIEGLR-------------------------NCPERIKEFVRNGFKSKI 417
KGY + ED+WE E LR NC + I+EFV +GFKSKI
Sbjct: 814 KGYRSDEDTWELAEELRYMLQNNVKKRFCCYLELINFVWNFSNCQDAIREFVTSGFKSKI 873
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG V VICGGPPCQGISGYNR RNVDSPL+DERN+QI++FMDIVE+LKP YVLMENV
Sbjct: 874 LPLPGRVGVICGGPPCQGISGYNRHRNVDSPLNDERNQQIIVFMDIVEYLKPSYVLMENV 933
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
VDIL+ DK SLGRYALSRLV+M+YQAR GI+ AGCYGL QFR R
Sbjct: 934 VDILRMDKGSLGRYALSRLVNMRYQARLGIMTAGCYGLSQFRSR 977
>gi|255579031|ref|XP_002530367.1| protein with unknown function [Ricinus communis]
gi|223530114|gb|EEF32028.1| protein with unknown function [Ricinus communis]
Length = 845
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 241/512 (47%), Positives = 321/512 (62%), Gaps = 50/512 (9%)
Query: 24 HGAYSDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIKGE-GTQKHIGKILEFFKTTDG 82
+G S DD+ V+ +CHY QA + ++DLGD AY+K E G +I +I+E F++ DG
Sbjct: 83 NGVLSKDDD---VTQAKCHYKQAMVDGILYDLGDDAYVKAEDGKPDYIARIVEMFESIDG 139
Query: 83 EEYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGL-- 140
E F QWFYRAEDTV+K+ + +R+F S + +DNP+DCI+SKV +A + P + L
Sbjct: 140 EPLFTAQWFYRAEDTVIKDYVKTAESRRVFLSEIRDDNPLDCIVSKVKIALVEPNLDLAE 199
Query: 141 KSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLP-----------SCTETVPTTATS 189
K ++P D Y+DM+Y + + T+ T+ T S + + V T
Sbjct: 200 KERNLPPCDLYYDMKYTLPFLTYETIKTDDSGRDSGSSSTISSENDSNNSIDDVKVTTAK 259
Query: 190 TFFENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLK 249
H K+EL LLDLYSGCG MSTGLC+GA LS LVT+WA+D + AC+SLK
Sbjct: 260 PLKVLSKVHSSEKSELYLLDLYSGCGAMSTGLCMGASLSGVKLVTKWAVDINAFACKSLK 319
Query: 250 LNHPEAQVRNEAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITR 309
NHPE +VRNEAAEDFL L+KEW+KLC++F++ E+
Sbjct: 320 TNHPETEVRNEAAEDFLSLLKEWEKLCRKFSLFGSEKH---------------------- 357
Query: 310 NSVDSPKVTGNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPN 369
P+ + NS ++ + ++ +EV +++ +CYGDPN
Sbjct: 358 -----PEQSSNSASDEEEEDEEEEEEEKGKDKDDDDDEI------FEVEKLLAVCYGDPN 406
Query: 370 ESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICG 429
+ KRGL FKV WKGY SED+WEPIEGL +C +++KEFV GF+SKILPLPGD D ICG
Sbjct: 407 KVNKRGLYFKVRWKGYGPSEDTWEPIEGLSDCKDKLKEFVTKGFRSKILPLPGDADFICG 466
Query: 430 GPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLG 489
GPPCQGISG+NRFRN +PLDD +N Q+V++MDIVE+LKPKYVLMENVVDIL+F L
Sbjct: 467 GPPCQGISGFNRFRNTKAPLDDPKNHQMVVYMDIVEYLKPKYVLMENVVDILRFAGGFLV 526
Query: 490 RYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
RYAL RL+ M YQAR G++AAG YGLPQFR+R
Sbjct: 527 RYALGRLISMNYQARLGMMAAGSYGLPQFRMR 558
>gi|242087283|ref|XP_002439474.1| hypothetical protein SORBIDRAFT_09g007390 [Sorghum bicolor]
gi|241944759|gb|EES17904.1| hypothetical protein SORBIDRAFT_09g007390 [Sorghum bicolor]
Length = 1441
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 248/509 (48%), Positives = 324/509 (63%), Gaps = 66/509 (12%)
Query: 34 KIVSNVECHYAQARIGECIFDLGDCAYIKG-EGTQKHIGKILEFFKTTDGEEYFRVQWFY 92
K V +V+CHY +A I +GDCA+IKG EG +IG++LEFF+TT E YF VQWF+
Sbjct: 685 KAVLDVKCHYLEASICGSTLCIGDCAFIKGLEGKPHYIGRLLEFFETTADEYYFTVQWFF 744
Query: 93 RAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDFYF 152
RAEDTVM++ A HD +RLFYS + +DN +DCI+SKV + + P + K IPS +Y+
Sbjct: 745 RAEDTVMEDQAQSHDPRRLFYSDLKDDNLLDCIVSKVTIMPVSPSLNEKPRLIPSFHYYY 804
Query: 153 DMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYS 212
DM+Y ++YSTF T+ G +D +L S + F E + EL+LLDLY
Sbjct: 805 DMKYSLDYSTFSTMEMGDPND-TLHSHYTSSNNVKRIDFTEKQKSPTSEMRELSLLDLYC 863
Query: 213 GCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEW 272
GCGGMSTGLCLGA+ NLV RWA+D D+ ACE+ +LNHPE +VRNE +DFLEL+KEW
Sbjct: 864 GCGGMSTGLCLGARGGGVNLVARWAVDGDEVACETFRLNHPETRVRNETTDDFLELLKEW 923
Query: 273 QKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPRVTRSSV 332
+KLCK + V+ +K +S S T++S +P + S +
Sbjct: 924 KKLCKTY----VKPCSKVKSQSNVPTQSSNGTPDCSTFSTE------------------- 960
Query: 333 NSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSW 392
E+EV ++VDIC+GDPN KR L FKV WKGY ++D+W
Sbjct: 961 ---------------------EFEVWKLVDICFGDPNGVRKRALYFKVRWKGYGPNDDTW 999
Query: 393 EPIEGLRNCPERIKEFVRNGFKSKILPLP--------------------GDVDVICGGPP 432
EP+EGL+NC + I++FV G KILPLP GDVDVICGGPP
Sbjct: 1000 EPMEGLKNCKDAIRDFVIEGHNKKILPLPAWPLPPLVGWMAACLGWLWLGDVDVICGGPP 1059
Query: 433 CQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYA 492
CQGISGYNR R D+P + ERN+QI++FMD+++FLKPKY+ MENV+DILKF A+L RYA
Sbjct: 1060 CQGISGYNRNREFDAPFNCERNKQIIVFMDVMQFLKPKYIYMENVLDILKFADATLARYA 1119
Query: 493 LSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
LSRLV M YQA+ G++AAGCYGLPQFR+R
Sbjct: 1120 LSRLVSMHYQAKLGVMAAGCYGLPQFRMR 1148
>gi|356497585|ref|XP_003517640.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Glycine
max]
Length = 868
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/502 (50%), Positives = 330/502 (65%), Gaps = 42/502 (8%)
Query: 30 DDEDKIVSNVECHYAQARIGEC-IFDLGDCAYIKGE-GTQKHIGKILEFFKTTDGEEYFR 87
+DED+ + HY QA + C ++ L D A++K E G +I KI+E F+ DG YF
Sbjct: 110 NDEDEEIQQARRHYTQAEVDGCMLYKLYDDAHVKAEEGEDNYICKIVEIFEAIDGALYFT 169
Query: 88 VQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGL--KSNSI 145
QW+YRA+DTV+K+ A + KR+F+S V +DNP+DC++ K+ +A+I + L K +I
Sbjct: 170 AQWYYRAKDTVIKKLAYLIEPKRVFFSEVQDDNPLDCLVEKLNIARITLNVDLEAKKETI 229
Query: 146 PSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFEN-MPNHG--PHK 202
P D+Y D +Y + YSTF L + S S T + T + N P P +
Sbjct: 230 PPCDYYCDTQYLLPYSTFVNLPSENGESGSETSSTISSETNGIGKYEVNSQPKEAFLPEE 289
Query: 203 A---ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRN 259
+ E+ LLDLY GCG MSTGLCLG LS NLVTRWA+D ++ ACE LKLNHPE +VRN
Sbjct: 290 SKDPEMKLLDLYCGCGAMSTGLCLGGNLSGVNLVTRWAVDLNQHACECLKLNHPETEVRN 349
Query: 260 EAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTG 319
E+AE+FL L+KEWQ+LC F+ +VE K+ S + V S + + N
Sbjct: 350 ESAENFLSLLKEWQELCSYFS--LVE---KKVSHEKYVNLFSEDDDDTSSNE-------- 396
Query: 320 NSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFK 379
VNS N +N ++ +EV+ I+ +CYGDPN+ ++GL FK
Sbjct: 397 -----------EVNSE--DDNELNEDDEI------FEVSEILAVCYGDPNKKKEQGLYFK 437
Query: 380 VHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGY 439
VHWKGY ++ DSWEPIEGL NC E+IKEFV GFKS+ILPLPGDVDVICGGPPCQGISG+
Sbjct: 438 VHWKGYESALDSWEPIEGLSNCKEKIKEFVSRGFKSQILPLPGDVDVICGGPPCQGISGF 497
Query: 440 NRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHM 499
NRFRN +SPLDDE+N+Q+V+FMDIV++LKPK+ LMENVVD++KF + LGRYAL RL+ M
Sbjct: 498 NRFRNKESPLDDEKNKQLVVFMDIVQYLKPKFTLMENVVDLVKFAEGFLGRYALGRLLQM 557
Query: 500 KYQARFGIIAAGCYGLPQFRLR 521
YQAR GI+AAG YGLPQFRLR
Sbjct: 558 NYQARLGIMAAGAYGLPQFRLR 579
>gi|358345790|ref|XP_003636958.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355502893|gb|AES84096.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 827
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/482 (48%), Positives = 300/482 (62%), Gaps = 43/482 (8%)
Query: 42 HYAQARIGECIFDLGDCAYIKGE-GTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTVMK 100
HY +A++ ++ L D AY+KGE G + +I +I+E F+T D E+YF QWFYRAEDTV+K
Sbjct: 92 HYHEAKVDGILYKLEDNAYVKGEEGKEDYIARIVEMFETPDEEQYFTAQWFYRAEDTVIK 151
Query: 101 EAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDFYFDMEYCVEY 160
+ + D+KR+F S V ++NP+DC++ KV + QI P K IP +FYFDM+Y V Y
Sbjct: 152 DHGNLVDKKRIFISDVKDENPLDCLVRKVNIVQISPDAA-KKKKIPPCEFYFDMKYTVPY 210
Query: 161 STFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGP-HKAELALLDLYSGCGGMST 219
TF + V + E ++ E LLDLYSGCG MST
Sbjct: 211 LTFSNVGNESETSTLSSESGYNVHAADKNAVKEKSSQIKECNRPEWTLLDLYSGCGAMST 270
Query: 220 GLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQKLCKRF 279
GLC GA +S LVTRWA+D + ACESLKLNHPE VRNE EDFL L+KEW KLC++F
Sbjct: 271 GLCFGASISGIKLVTRWAVDINDHACESLKLNHPETHVRNEPTEDFLSLLKEWAKLCEKF 330
Query: 280 AVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPRVTRSSVNSPRVTR 339
+N E S DS
Sbjct: 331 VLNGAE-----------------------------------STDSDLNAGEEAGEEADGE 355
Query: 340 NSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLR 399
+ NSP D ++ +EV R++ ICYGDPNE K GL F+V WKGY +S D+WEPIEGL
Sbjct: 356 ATNNSP-DSEV----FEVERLLSICYGDPNEDEKPGLYFRVQWKGYDSSYDTWEPIEGLS 410
Query: 400 NCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVI 459
C + +K+FV NG+K KILPLPG D ICGGPPCQG+SG+NRFRN ++PLDDE+N+Q+++
Sbjct: 411 ECKDAMKDFVINGYKEKILPLPGQADFICGGPPCQGVSGFNRFRNKNAPLDDEKNKQLIV 470
Query: 460 FMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFR 519
+MDI+ FLKPKYVLMENVVDILKF LGRYA+ RLV M YQAR G++AAG YGLPQFR
Sbjct: 471 YMDIINFLKPKYVLMENVVDILKFAGGFLGRYAVGRLVAMNYQARMGMMAAGSYGLPQFR 530
Query: 520 LR 521
+R
Sbjct: 531 MR 532
>gi|356540854|ref|XP_003538899.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max]
Length = 830
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/498 (47%), Positives = 312/498 (62%), Gaps = 48/498 (9%)
Query: 32 EDKIVSNVECHYAQARIGECIFDLGDCAYIKGE-GTQKHIGKILEFFKTTDGEEYFRVQW 90
E+ V CHY QA++ +++L D AY+K E G +I +I+E F+T D E+ F QW
Sbjct: 75 ENSEVMPARCHYRQAKVDGVVYNLYDDAYVKAEDGKPDYIARIVEMFETVDKEQCFTAQW 134
Query: 91 FYRAEDTVM---KEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGL--KSNSI 145
FYRAEDTVM K D D+KR+F S V + NP+DCI+SKV + + P + L K +
Sbjct: 135 FYRAEDTVMQVIKNHGDLVDKKRIFISDVKDVNPLDCIVSKVKIYKKSPSVDLTSKKGKL 194
Query: 146 PSSDFYFDMEYCVEYSTFRTLL--TGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKA 203
PS D+Y+DM+Y V Y TF ++ + +S S + + A + N+ +
Sbjct: 195 PSCDYYYDMKYTVPYLTFSNIVNESDASSTISSESGSNGCVSNANLANGKTTQNNSSGSS 254
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
E LLDLYSGCG MSTGLC GA L+ LVTRWA+D + ACESLKLNHPE QVRNE AE
Sbjct: 255 EWTLLDLYSGCGAMSTGLCFGASLAGIKLVTRWAVDINAHACESLKLNHPETQVRNEPAE 314
Query: 264 DFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVD 323
DFL L+K W KLC+ FA+ ER + M + N + +GN D
Sbjct: 315 DFLNLIKSWAKLCEEFALLGSERLDSDPDMDE------------DENEAVRKEESGNQSD 362
Query: 324 SPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKVHWK 383
S E+EV +++ +CYGDPN+ K GL FKV W
Sbjct: 363 SE----------------------------EFEVEKLLAVCYGDPNDVKKPGLYFKVRWL 394
Query: 384 GYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFR 443
GY++S D+WEPIEGL +C E +K+FV G+K ++LPLPGD + ICGGPPCQG+SG+NRFR
Sbjct: 395 GYASSYDTWEPIEGLSDCKEAMKDFVTKGYKKRLLPLPGDANFICGGPPCQGVSGFNRFR 454
Query: 444 NVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQA 503
N +PL+D +N+Q++++MDI++FLKPKYVLMENVVDIL+F LGRYA+ RLV M YQA
Sbjct: 455 NAAAPLEDTKNKQLLVYMDIIDFLKPKYVLMENVVDILRFSGGYLGRYAICRLVAMNYQA 514
Query: 504 RFGIIAAGCYGLPQFRLR 521
R G++AAG YGLPQFR+R
Sbjct: 515 RMGMMAAGSYGLPQFRMR 532
>gi|357484051|ref|XP_003612312.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355513647|gb|AES95270.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 835
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/488 (48%), Positives = 305/488 (62%), Gaps = 50/488 (10%)
Query: 42 HYAQARIGECIFDLGDCAYIKGE-GTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTVMK 100
HY +A++ ++ L D AY+KGE G + +I I+E F+T + E+YF QWFYRAEDTV+K
Sbjct: 96 HYREAKVDGILYKLEDNAYVKGEEGKEDYIATIVEMFETPEEEQYFTAQWFYRAEDTVIK 155
Query: 101 EAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDFYFDMEYCVEY 160
+ + D+KR+F S V ++NP+DC++ K+ + QI P K IP DFYFDM+Y V Y
Sbjct: 156 DHGNLVDKKRIFKSDVKDENPLDCLVRKINIVQISPDAA-KKKKIPPCDFYFDMKYNVPY 214
Query: 161 STF------RTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGC 214
TF ++ + LS S + T ++ ++ E LLDLYSGC
Sbjct: 215 LTFSNIDNAHAIIESETSTLSSESGSNVRATDKKGVKEKSTQIKESNRPEWTLLDLYSGC 274
Query: 215 GGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQK 274
G MSTGLC GA +S LVT+WA+D +K ACESLKLNHPE VRNE EDFL L+KEW K
Sbjct: 275 GAMSTGLCFGASISGIKLVTKWAVDINKYACESLKLNHPETYVRNEPTEDFLSLLKEWAK 334
Query: 275 LCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPRVTRSSVNS 334
LC F +N E T S +N+
Sbjct: 335 LCDEFVLNGAES-----------------------------------------TDSDLNA 353
Query: 335 PRVTRNSVNSPRDVDIPPGE-YEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWE 393
+ D P E +EV R++ ICYGDPNE K GL FKVHWKGY +S D+WE
Sbjct: 354 AEEAEEKADDEAMDDSPDSEVFEVERLLSICYGDPNEDEKPGLYFKVHWKGYDSSYDTWE 413
Query: 394 PIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDER 453
PIEGL C + +K+FV NG+K KILPLPG D ICGGPPCQG+SG+NRFRN ++PL+DE+
Sbjct: 414 PIEGLSECKDAMKDFVINGYKEKILPLPGQADFICGGPPCQGVSGFNRFRNKNAPLEDEK 473
Query: 454 NRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCY 513
N+Q++++M+I++FLKPKYVLMENVVDILKF LGRYA+ RLV M YQAR G++AAG Y
Sbjct: 474 NKQLIVYMNIIDFLKPKYVLMENVVDILKFAGGFLGRYAVGRLVAMNYQARMGMMAAGSY 533
Query: 514 GLPQFRLR 521
GLPQFR+R
Sbjct: 534 GLPQFRMR 541
>gi|330370547|gb|AEC12443.1| chromomethylase 3 [Gossypium hirsutum]
Length = 824
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/502 (47%), Positives = 321/502 (63%), Gaps = 58/502 (11%)
Query: 28 SDDDEDKIVSNVECHYAQARIGEC-IFDLGDCAYIKGE-GTQKHIGKILEFFKTTDGEEY 85
S+ D ++I+ HY QA++ C IF+L D A++K E G +I KI+E F+ DG+ Y
Sbjct: 77 SNGDSEEII-QARRHYTQAKVDGCMIFNLYDDAHVKAEDGEDCYICKIVEMFEAVDGDLY 135
Query: 86 FRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSI 145
F QWFYRA+DTV+K D+KR+F+S + +DNP+DC+++K+ +A++ + K+ I
Sbjct: 136 FTAQWFYRAQDTVLKTLGHLIDKKRVFFSQIQDDNPLDCLVAKLNIAKV--DLEAKNKEI 193
Query: 146 PSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMP------NHG 199
PS D+Y DM Y +EYS+F L P A+ST ++ P N G
Sbjct: 194 PSCDYYCDMLYKLEYSSFTNLP---------PEGKTNASEEASSTISDDSPDTVNGANSG 244
Query: 200 PHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRN 259
A +LLDLYSGCG MSTGLCLGA ++ LVT+WA+D +K ACESL+ NHPE VRN
Sbjct: 245 SEDA--SLLDLYSGCGAMSTGLCLGANMAGLRLVTKWAVDINKYACESLQWNHPETTVRN 302
Query: 260 EAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTG 319
E+AEDFL L+KEW++LC F++ S S+ + R S NS N D +
Sbjct: 303 ESAEDFLALLKEWERLCASFSL----------SKSENLERQSFNSSVNEDNVNDEEEEED 352
Query: 320 NSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFK 379
+ D +EV + + ICYGDP E G+RGL K
Sbjct: 353 ENEDGDGEV--------------------------FEVEKFLAICYGDPKEKGERGLYLK 386
Query: 380 VHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGY 439
V WK Y ED+WEP++GL +C E +K+FV +GFK+KILPLPGDVDVICGGPPCQGISG+
Sbjct: 387 VRWKNYGPEEDTWEPLDGLGDCRECLKDFVTSGFKAKILPLPGDVDVICGGPPCQGISGF 446
Query: 440 NRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHM 499
NRFRN D+PL DE+N+Q+ +F +IVE+LKPK+VLMENVVDI+KF + LGRYALS+L+H+
Sbjct: 447 NRFRNKDNPLQDEKNKQLQVFTEIVEYLKPKFVLMENVVDIVKFAEGYLGRYALSKLIHL 506
Query: 500 KYQARFGIIAAGCYGLPQFRLR 521
YQ R G++AAG YGLPQFR+R
Sbjct: 507 NYQVRMGMMAAGAYGLPQFRMR 528
>gi|347952210|gb|AEP33250.1| CMT-type DNA-methyltransferase [Posidonia oceanica]
Length = 802
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 236/484 (48%), Positives = 303/484 (62%), Gaps = 56/484 (11%)
Query: 39 VECHYAQARIGECIFDLGDCAYIKGE-GTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDT 97
+CHY +A + +++L D Y+K E G +IG+I+EFF+ DGE YF QWF+R EDT
Sbjct: 61 AKCHYERAEVEGFVYNLHDDVYVKAETGKPDYIGRIVEFFEAIDGEYYFTAQWFFRVEDT 120
Query: 98 VMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDFYFDMEYC 157
++ DFHDR R+F S NDN +DCI+SK+ + Q P+ + IPS D Y++M Y
Sbjct: 121 IIGSVGDFHDRCRVFLSDEKNDNVLDCIVSKIKIVQRDPE---QKGPIPSCDLYYNMSYS 177
Query: 158 VEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGM 217
V YS+F L K S S T + ++ E + + + +LDLYSGCG M
Sbjct: 178 VPYSSFTNLSKDKSRAGSEESSTVSFEDAVDTSNEETL-----SEKKTTVLDLYSGCGAM 232
Query: 218 STGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQKLCK 277
STGLC GA L+ N+ T WA+D +K AC SL+LNH EA+VRNE AE FL L+KEW+KLC+
Sbjct: 233 STGLCHGAHLAGLNIETMWAVDMNKDACRSLQLNHSEAKVRNENAEHFLALLKEWEKLCE 292
Query: 278 RFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPRVTRSSVNSPRV 337
+++ +K + + + + NS D
Sbjct: 293 KYS------GSKDLDLEETMQED-------------------NSED-------------- 313
Query: 338 TRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEG 397
N D D E+ V +++DICYGDP + GK G+ FKV WKGY + ED+WEPIE
Sbjct: 314 -----NDDADSD---EEFVVEKLLDICYGDPAKIGKDGIKFKVRWKGYGSDEDTWEPIEN 365
Query: 398 LRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQI 457
L C ER+ FVR G K+ +LPLPGDVD +CGGPPCQGISG+NRFRN D+PLDDE+NRQ+
Sbjct: 366 LGKCEERMGNFVRWGMKTYLLPLPGDVDAVCGGPPCQGISGFNRFRNSDNPLDDEKNRQM 425
Query: 458 VIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQ 517
V +MDIV+ LKPKYVLMENVVDILKF K LGRYALS LV YQAR GI+AAGCYGLPQ
Sbjct: 426 VTYMDIVDHLKPKYVLMENVVDILKFSKGFLGRYALSFLVSRNYQARLGIMAAGCYGLPQ 485
Query: 518 FRLR 521
FRLR
Sbjct: 486 FRLR 489
>gi|356495335|ref|XP_003516534.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max]
Length = 834
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/501 (46%), Positives = 307/501 (61%), Gaps = 51/501 (10%)
Query: 32 EDKIVSNVECHYAQARIGECIFDLGDCAYIKGE-GTQKHIGKILEFFKTTDGEEYFRVQW 90
E+ V CHY QA++ +++L D AY+K E G +I +I+E F+T D E+ F QW
Sbjct: 77 ENSEVMLARCHYRQAKVDGVVYNLYDDAYVKAEDGKPDYIARIVEMFETVDKEQCFMAQW 136
Query: 91 FYRAEDTVM---KEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNS--I 145
FYRAEDTVM K D D+KR+F S V + NP+DCI+SKV + + P + L S +
Sbjct: 137 FYRAEDTVMQVIKNHGDLVDKKRVFISDVKDVNPLDCIVSKVKIFKKNPSVDLASKKAKL 196
Query: 146 PSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVP-----TTATSTFFENMPNHGP 200
P D+Y+DM+Y V Y TF L+ GK + + + A + N+
Sbjct: 197 PFCDYYYDMKYTVPYLTFSNLVNGKNDSDASSTISSESGSIGCVNNANLAKRKTTQNNSS 256
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNE 260
++ LLDLYSGCG MSTGLCLGA L+ LVT WA+D + AC+SLKLNHPE VRNE
Sbjct: 257 GSSQWTLLDLYSGCGAMSTGLCLGASLAGIKLVTMWAVDINAHACKSLKLNHPETHVRNE 316
Query: 261 AAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGN 320
AEDFL L+K W KLC+ FA+ ER + M + N + +GN
Sbjct: 317 PAEDFLNLIKAWAKLCEEFALLGSERSDSDPDMDE------------DENEAVQKEESGN 364
Query: 321 SVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKV 380
D E+EV +++ +CYGDPN K GL FKV
Sbjct: 365 QSDLE----------------------------EFEVEKLLAVCYGDPNGVKKPGLYFKV 396
Query: 381 HWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYN 440
W GY +S D+WEPI+GL +C E +K+FV G+K ++LPLPGD + ICGGPPCQG+SG+N
Sbjct: 397 RWLGYDSSYDTWEPIDGLSDCKEVMKDFVTKGYKKRLLPLPGDANFICGGPPCQGVSGFN 456
Query: 441 RFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMK 500
RFRN ++PL+D +N+Q++++MDI++FLKPKYVLMENVVDILKF LGRYA+ RLV M
Sbjct: 457 RFRNAEAPLEDTKNKQLLVYMDIIDFLKPKYVLMENVVDILKFSGGYLGRYAIGRLVAMN 516
Query: 501 YQARFGIIAAGCYGLPQFRLR 521
YQAR G++AAG YGLPQFR+R
Sbjct: 517 YQARMGMMAAGSYGLPQFRMR 537
>gi|218192371|gb|EEC74798.1| hypothetical protein OsI_10599 [Oryza sativa Indica Group]
Length = 1760
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/504 (46%), Positives = 302/504 (59%), Gaps = 59/504 (11%)
Query: 31 DEDKIVSNVECHYAQARIGECIFDLGDCAYIK-GEGTQKHIGKILEFFKTTDGEEYFRVQ 89
DED+ + CHY A + + I+ L D Y+K G + +IG+I EFF+ D YF Q
Sbjct: 267 DEDEEM-KARCHYLAANVDDEIYHLDDDVYVKAGPDEENYIGRITEFFEGVDRGSYFSCQ 325
Query: 90 WFYRAEDTV-----MKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIG--LKS 142
WF+R DTV +K H+ KR+F S NDN ++CI+SKV +A + P + ++
Sbjct: 326 WFFRTADTVISSKLLKVHDHRHNHKRVFLSKEKNDNLIECIVSKVKIAHVDPNMTPQARA 385
Query: 143 NSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDL-----SLPSCTETVPTTATSTFFENMPN 197
++I D Y+DM Y V YSTF L L S SC + ++ + +
Sbjct: 386 HAISDCDLYYDMSYSVAYSTFANLPADNDGALGSEATSNISCDDADNSSKGKLSADIVSP 445
Query: 198 HGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
+ +LLDLYSGCG MSTGLCLG S NL TRWA+D +K AC SLK NHP +QV
Sbjct: 446 YSEQTETASLLDLYSGCGAMSTGLCLGFAFSGINLETRWAVDINKYACASLKHNHPYSQV 505
Query: 258 RNEAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKV 317
RNE EDFL L+++W LC+++ V+ +N+ P I
Sbjct: 506 RNEKTEDFLALIQQWDALCRKYVVH----------------KNNTLEPGI---------- 539
Query: 318 TGNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLN 377
D P VN P +P ++V +++ICYGDP+ +GK GL
Sbjct: 540 -----DMPLNDADDVNEP--------------LPEDIFDVEELLEICYGDPSNTGKNGLW 580
Query: 378 FKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGIS 437
FKV WKGY S D+WEPI+GL +CPERIKEFV G K ILPLPG VDVICGGPPCQGIS
Sbjct: 581 FKVRWKGYDPSYDTWEPIDGLSDCPERIKEFVEKGHKDNILPLPGAVDVICGGPPCQGIS 640
Query: 438 GYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLV 497
G+NRFR + PL+DE+N+Q+V+FMDIV++L+PKYVLMENVVDILKF LGRYA+S LV
Sbjct: 641 GFNRFRKHNDPLEDEKNKQLVVFMDIVKYLRPKYVLMENVVDILKFADGFLGRYAMSCLV 700
Query: 498 HMKYQARFGIIAAGCYGLPQFRLR 521
M YQAR G++AAG YGLPQFR+R
Sbjct: 701 AMNYQARLGMMAAGYYGLPQFRMR 724
>gi|24421681|gb|AAN60988.1| Putative DNA cytosine methyltransferase MET2a [Oryza sativa
Japonica Group]
gi|108706955|gb|ABF94750.1| C-5 cytosine-specific DNA methylase family protein, expressed
[Oryza sativa Japonica Group]
Length = 1761
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/504 (46%), Positives = 301/504 (59%), Gaps = 59/504 (11%)
Query: 31 DEDKIVSNVECHYAQARIGECIFDLGDCAYIK-GEGTQKHIGKILEFFKTTDGEEYFRVQ 89
DED+ + CHY A + + I+ L D Y+K G + +IG+I EFF+ D YF Q
Sbjct: 267 DEDEEM-KARCHYLAANVDDEIYHLDDDVYVKAGPDEENYIGRITEFFEGVDRGSYFSCQ 325
Query: 90 WFYRAEDTV-----MKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIG--LKS 142
WF+R DTV +K H+ KR+F S NDN ++CI+SKV +A + P + ++
Sbjct: 326 WFFRTADTVISSKLLKVHDHRHNHKRVFLSKEKNDNLIECIVSKVKIAHVDPNMTPQARA 385
Query: 143 NSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDL-----SLPSCTETVPTTATSTFFENMPN 197
++I D Y+DM Y V YSTF L L S SC + ++ + +
Sbjct: 386 HAISDCDLYYDMSYSVAYSTFANLPADNDGALGSEATSNISCDDADNSSKGKLSADIVAP 445
Query: 198 HGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
+ +LLDLYSGCG MSTGLCLG S NL TRWA+D +K AC LK NHP +QV
Sbjct: 446 YSEQTETASLLDLYSGCGAMSTGLCLGFAFSGINLETRWAVDINKYACACLKHNHPYSQV 505
Query: 258 RNEAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKV 317
RNE EDFL L+++W LC+++ V+ +N PSI
Sbjct: 506 RNEKTEDFLALIQQWDALCRKYVVH----------------KNDTLEPSI---------- 539
Query: 318 TGNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLN 377
D P VN P +P ++V +++ICYGDP+ +GK GL
Sbjct: 540 -----DMPLNDADDVNEP--------------LPEDIFDVEELLEICYGDPSNTGKNGLW 580
Query: 378 FKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGIS 437
FKV WKGY S D+WEPI+GL +CPERIKEFV G K ILPLPG VDVICGGPPCQGIS
Sbjct: 581 FKVRWKGYDPSYDTWEPIDGLSDCPERIKEFVEKGHKENILPLPGAVDVICGGPPCQGIS 640
Query: 438 GYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLV 497
G+NRFR + PL+DE+N+Q+V+FMDIV++L+PKYVLMENVVDILKF LGRYA+S LV
Sbjct: 641 GFNRFRKHNDPLEDEKNKQLVVFMDIVKYLRPKYVLMENVVDILKFADGFLGRYAMSCLV 700
Query: 498 HMKYQARFGIIAAGCYGLPQFRLR 521
M YQAR G++AAG YGLPQFR+R
Sbjct: 701 AMNYQARLGMMAAGYYGLPQFRMR 724
>gi|222624499|gb|EEE58631.1| hypothetical protein OsJ_09996 [Oryza sativa Japonica Group]
Length = 1033
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/504 (46%), Positives = 301/504 (59%), Gaps = 59/504 (11%)
Query: 31 DEDKIVSNVECHYAQARIGECIFDLGDCAYIK-GEGTQKHIGKILEFFKTTDGEEYFRVQ 89
DED+ + CHY A + + I+ L D Y+K G + +IG+I EFF+ D YF Q
Sbjct: 267 DEDEEM-KARCHYLAANVDDEIYHLDDDVYVKAGPDEENYIGRITEFFEGVDRGSYFSCQ 325
Query: 90 WFYRAEDTV-----MKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIG--LKS 142
WF+R DTV +K H+ KR+F S NDN ++CI+SKV +A + P + ++
Sbjct: 326 WFFRTADTVISSKLLKVHDHRHNHKRVFLSKEKNDNLIECIVSKVKIAHVDPNMTPQARA 385
Query: 143 NSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDL-----SLPSCTETVPTTATSTFFENMPN 197
++I D Y+DM Y V YSTF L L S SC + ++ + +
Sbjct: 386 HAISDCDLYYDMSYSVAYSTFANLPADNDGALGSEATSNISCDDADNSSKGKLSADIVAP 445
Query: 198 HGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
+ +LLDLYSGCG MSTGLCLG S NL TRWA+D +K AC LK NHP +QV
Sbjct: 446 YSEQTETASLLDLYSGCGAMSTGLCLGFAFSGINLETRWAVDINKYACACLKHNHPYSQV 505
Query: 258 RNEAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKV 317
RNE EDFL L+++W LC+++ V+ +N PSI
Sbjct: 506 RNEKTEDFLALIQQWDALCRKYVVH----------------KNDTLEPSI---------- 539
Query: 318 TGNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLN 377
D P VN P +P ++V +++ICYGDP+ +GK GL
Sbjct: 540 -----DMPLNDADDVNEP--------------LPEDIFDVEELLEICYGDPSNTGKNGLW 580
Query: 378 FKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGIS 437
FKV WKGY S D+WEPI+GL +CPERIKEFV G K ILPLPG VDVICGGPPCQGIS
Sbjct: 581 FKVRWKGYDPSYDTWEPIDGLSDCPERIKEFVEKGHKENILPLPGAVDVICGGPPCQGIS 640
Query: 438 GYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLV 497
G+NRFR + PL+DE+N+Q+V+FMDIV++L+PKYVLMENVVDILKF LGRYA+S LV
Sbjct: 641 GFNRFRKHNDPLEDEKNKQLVVFMDIVKYLRPKYVLMENVVDILKFADGFLGRYAMSCLV 700
Query: 498 HMKYQARFGIIAAGCYGLPQFRLR 521
M YQAR G++AAG YGLPQFR+R
Sbjct: 701 AMNYQARLGMMAAGYYGLPQFRMR 724
>gi|27529842|dbj|BAC53936.1| chromomethylase-like protein [Nicotiana tabacum]
Length = 741
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 230/496 (46%), Positives = 309/496 (62%), Gaps = 48/496 (9%)
Query: 30 DDEDKIVSNVECHYAQARIGECIFDLGDCAYIKGEGTQK-HIGKILEFFKTTDGEEYFRV 88
DD D+++ +CH+ QA + I++LGD AY++ + +I KI+EFF+ DG +YF
Sbjct: 7 DDGDQLI-QAKCHFTQAVVDGQIYNLGDDAYVQASSDEDDYICKIVEFFQAVDGMQYFTA 65
Query: 89 QWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKI--GLKSNSIP 146
QWFYRA+DTV+K F D KR+F+S + +DNP+ C++ K+ + IP + LK +
Sbjct: 66 QWFYRAKDTVIKAHDQFIDNKRVFFSEIKDDNPLGCLVKKIKIVAIPSNVRPPLKESLRS 125
Query: 147 SSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELA 206
+SD+Y+DM Y + YS+F +L D+S P ++ S + K E
Sbjct: 126 NSDYYYDMMYLLPYSSFVSL----PQDVSSPISESDSTISSDSDTV----DVKEQKLEKN 177
Query: 207 LLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFL 266
LLDLYSGCG MSTGLCLGA + LVT+WA+D ++ AC+SLK NHPE VRNE+A+DFL
Sbjct: 178 LLDLYSGCGAMSTGLCLGADIGGVKLVTKWAVDLNQYACDSLKWNHPETAVRNESADDFL 237
Query: 267 ELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPR 326
L++EW++LC S + RN N+P+ + V ++ +
Sbjct: 238 LLLREWRQLCA----------------SCSLLRN--NTPTHSFLKVRDEDDKDDNDNEDE 279
Query: 327 VTRSSVNSPRVTRNSVNSPRDVDIPPGE-YEVARIVDICYGDPNESGKRGLNFKVHWKGY 385
S D GE +EV ++++ICYGDP E K GL FKV WKGY
Sbjct: 280 DEGSG-----------------DDEQGEIFEVEQLLEICYGDPKEKNKPGLYFKVRWKGY 322
Query: 386 STSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNV 445
ED+WEPIEGL C E+IK+FV GFK+ ILPLPG+V VICGGPPCQG+SG+NRFRN
Sbjct: 323 GQEEDTWEPIEGLDGCQEKIKDFVAKGFKASILPLPGEVQVICGGPPCQGVSGFNRFRNS 382
Query: 446 DSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARF 505
+PL D +N+Q+ FMDIVEFL P++VLMENVVD++KF LGRYAL RLV M YQAR
Sbjct: 383 TNPLGDSKNKQLETFMDIVEFLNPRFVLMENVVDLVKFADGFLGRYALGRLVGMNYQARM 442
Query: 506 GIIAAGCYGLPQFRLR 521
G++ AG YGLPQFR R
Sbjct: 443 GMMVAGAYGLPQFRRR 458
>gi|169977312|emb|CAQ18903.1| chromomethylase [Nicotiana sylvestris]
gi|169977314|emb|CAQ18904.1| chromomethylase [Nicotiana sylvestris]
gi|169977316|emb|CAQ18905.1| chromomethylase [Nicotiana sylvestris]
gi|169977318|emb|CAQ18906.1| chromomethylase [Nicotiana sylvestris]
Length = 741
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/496 (46%), Positives = 307/496 (61%), Gaps = 48/496 (9%)
Query: 30 DDEDKIVSNVECHYAQARIGECIFDLGDCAYIKGEGTQK-HIGKILEFFKTTDGEEYFRV 88
DD D+++ +CH+AQA + I++LGD AY++ + +I KI+EFF+ DG +YF
Sbjct: 7 DDADQLIQ-AKCHFAQAVVDGQIYNLGDDAYVQASNDEDDYICKIVEFFQAVDGMQYFTA 65
Query: 89 QWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPP--KIGLKSNSIP 146
QWFYRA+DTV+K F + KR+F+S + +DNP+ C++ K+ + IP ++ LK +
Sbjct: 66 QWFYRAKDTVIKAHDQFINNKRVFFSEIKDDNPLGCLVKKIKIVPIPSNVRLPLKESLRS 125
Query: 147 SSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELA 206
+SD+Y+DM Y + YS+F +L D+S P ++ S + K E
Sbjct: 126 NSDYYYDMMYLLPYSSFVSL----PQDVSSPISESDSTISSDSDTV----DVKEQKLEKN 177
Query: 207 LLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFL 266
LLDLYSGCG MSTGLCLGA + LVT+WA+D ++ AC+SLK NHPE VRNE+A+DFL
Sbjct: 178 LLDLYSGCGAMSTGLCLGADIGGVKLVTKWAVDLNQYACDSLKWNHPETAVRNESADDFL 237
Query: 267 ELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPR 326
L++EW++LC S S+ RN N+ P
Sbjct: 238 LLLREWRQLCA--------------------------SCSLLRN---------NTPTHPF 262
Query: 327 VTRSSVNSPRVTRNSVNSPRDVDIPPGE-YEVARIVDICYGDPNESGKRGLNFKVHWKGY 385
+ + N D GE +EV +++ICYGDP E K GL FKV WKGY
Sbjct: 263 LKVRDEDEEDNNDNGDEDEGSGDDEQGEIFEVEELLEICYGDPKEINKPGLYFKVRWKGY 322
Query: 386 STSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNV 445
ED+WEPIEGL C E+IK+FV GFK+ ILPLPG+V+VICGGPPCQG+SG+NRFRN
Sbjct: 323 GQEEDTWEPIEGLDGCQEKIKDFVAKGFKASILPLPGEVEVICGGPPCQGVSGFNRFRNS 382
Query: 446 DSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARF 505
+PL D +N+Q+ FMDIVEFL P++VLMENVVD++KF LGRYAL RLV M YQ R
Sbjct: 383 KNPLGDSKNKQLETFMDIVEFLNPRFVLMENVVDLVKFADGFLGRYALGRLVGMNYQTRM 442
Query: 506 GIIAAGCYGLPQFRLR 521
G++ AG YGLPQFR R
Sbjct: 443 GMMVAGAYGLPQFRRR 458
>gi|388890583|gb|AFK80345.1| chromomethylase 3 [Nicotiana benthamiana]
Length = 740
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/498 (46%), Positives = 304/498 (61%), Gaps = 53/498 (10%)
Query: 30 DDEDKIVSNVECHYAQARIGECIFDLGDCAYIKGEGTQK-HIGKILEFFKTTDGEEYFRV 88
DD D ++ +CH+ QA + I++LGD AY++ + +I KI+EFF+ DG +YF
Sbjct: 7 DDADHLIQ-AKCHFTQAVVDGQIYNLGDDAYVQASNDEDDYICKIVEFFQAVDGTQYFTA 65
Query: 89 QWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPP--KIGLKSNSIP 146
QWFYRA+DTV+K F D KR+F+S + +DNP+ C++ K+ + IP ++ LK +
Sbjct: 66 QWFYRAKDTVIKAHDQFIDNKRVFFSEIKDDNPLGCLVKKIKIVPIPSNVRLPLKESLKS 125
Query: 147 SSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELA 206
+SD+Y+DM Y + YS+F +L D+S P ++ S + K E+
Sbjct: 126 NSDYYYDMMYLLPYSSFVSL----PQDVSSPISESDSTISSDSDTVDVKE----QKLEMN 177
Query: 207 LLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFL 266
LLDLYSGCG MSTGLCLGA + LVT+WA+D ++ AC+SLK NHPE VRNE+A+DFL
Sbjct: 178 LLDLYSGCGAMSTGLCLGADIGGVKLVTKWAVDLNQYACDSLKWNHPETAVRNESADDFL 237
Query: 267 ELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSP- 325
L+ EW++LC S S+ RN NS P
Sbjct: 238 LLLGEWRQLCA--------------------------SCSLLRN---------NSPTHPF 262
Query: 326 -RVTRSSVNSPRVTRNSVNSPRDVDIPPGE-YEVARIVDICYGDPNESGKRGLNFKVHWK 383
+V S D GE +EV +++ICYGDP E K GL FKV WK
Sbjct: 263 LKVRDEDEEDNNNEDEDEGSGDDEQ---GEIFEVEELLEICYGDPKEINKPGLYFKVRWK 319
Query: 384 GYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFR 443
GY ED+WEPIEG C E+IK+FV GFK+ ILPLPG+V VICGGPPCQG+SG+NRFR
Sbjct: 320 GYGQEEDTWEPIEGFDGCQEKIKDFVTKGFKASILPLPGEVAVICGGPPCQGVSGFNRFR 379
Query: 444 NVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQA 503
N +PL D +N+Q+ FMDIVEFL P++VLMENVVD++KF LGRYAL RLV M YQA
Sbjct: 380 NSKNPLGDSKNKQLETFMDIVEFLNPRFVLMENVVDLVKFADGFLGRYALGRLVGMDYQA 439
Query: 504 RFGIIAAGCYGLPQFRLR 521
R G++ AG YGLPQFR R
Sbjct: 440 RMGMMVAGAYGLPQFRRR 457
>gi|242077178|ref|XP_002448525.1| hypothetical protein SORBIDRAFT_06g028430 [Sorghum bicolor]
gi|241939708|gb|EES12853.1| hypothetical protein SORBIDRAFT_06g028430 [Sorghum bicolor]
Length = 913
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/494 (46%), Positives = 297/494 (60%), Gaps = 68/494 (13%)
Query: 38 NVECHYAQARIGECIFDLGDCAYIK-GEGTQKHIGKILEFFKTTDGEEYFRVQWFYRAED 96
N +CHY A++ ++ LGD Y+K GE +IG+I EFF+ TD YF +WF+RAED
Sbjct: 172 NAKCHYRSAKVDNVVYCLGDDVYVKAGENEADYIGRITEFFEGTDRCHYFTCRWFFRAED 231
Query: 97 TVMKEAADF------HDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNS--IPSS 148
TV+ HD +R+F S NDN +DCIISKV + + P + K+ + I
Sbjct: 232 TVINSLVSINVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPKAKAQLIEHC 291
Query: 149 DFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALL 208
D Y+DM Y V YSTF I + S +ET ++ P+ P + LL
Sbjct: 292 DLYYDMSYSVAYSTF-----ANISSENGQSGSETASGISSDDVDLEAPSSMPERT-ATLL 345
Query: 209 DLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLEL 268
DLYSGCGGMSTGLCLGA LS L TRWA+D + AC+SLK NHP+ +VRNE A++FL L
Sbjct: 346 DLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKADEFLAL 405
Query: 269 VKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPRVT 328
+KEW LC+++ + Q V N S
Sbjct: 406 LKEWAVLCEKY-------------VHQDVDSNLAGSED---------------------- 430
Query: 329 RSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKR-GLNFKVHWKGYST 387
+ SP D D E+ V +++ ICYG SG++ G+ FKV W+GY
Sbjct: 431 ----------QEDEGSPLDKD----EFVVEKLIGICYGG---SGRKDGIYFKVQWEGYGP 473
Query: 388 SEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDS 447
ED+WEPI+ L +CP +I+EFV+ G + +ILPLPGDVDVICGGPPCQGISG+NRFRN D
Sbjct: 474 EEDTWEPIDNLSDCPLKIREFVQEGHRRRILPLPGDVDVICGGPPCQGISGFNRFRNRDE 533
Query: 448 PLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGI 507
PL DE+N+Q+V FMDIV +LKPKYVLMENVVDILKF LG+YALS LV MKYQAR G+
Sbjct: 534 PLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGM 593
Query: 508 IAAGCYGLPQFRLR 521
+ AGCYGLPQFR+R
Sbjct: 594 MVAGCYGLPQFRMR 607
>gi|162463785|ref|NP_001104978.1| DNA (cytosine-5)-methyltransferase 1 [Zea mays]
gi|75168496|sp|Q9AXT8.1|CMT1_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 1; AltName:
Full=Chromomethylase 1; AltName: Full=DNA cytosine
methyltransferase MET2a; AltName: Full=Zea
methyltransferase2; Short=Zmet2
gi|13021690|gb|AAK11516.1|AF243043_1 DNA cytosine methyltransferase MET2a [Zea mays]
gi|260749135|gb|ACX48824.1| chromomethylase [Zea mays]
Length = 912
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/506 (46%), Positives = 303/506 (59%), Gaps = 69/506 (13%)
Query: 25 GAYSDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIK-GEGTQKHIGKILEFFKTTDGE 83
A D+E+++ CHY A++ ++ LGD Y+K GE +IG+I EFF+ TD
Sbjct: 160 AAKKPDEEEEL--KARCHYRSAKVDNVVYCLGDDVYVKAGENEADYIGRITEFFEGTDQC 217
Query: 84 EYFRVQWFYRAEDTVMKEAADF------HDRKRLFYSTVMNDNPVDCIISKVIVAQIPPK 137
YF +WF+RAEDTV+ HD +R+F S NDN +DCIISKV + + P
Sbjct: 218 HYFTCRWFFRAEDTVINSLVSISVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPN 277
Query: 138 IGLKSNS--IPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENM 195
+ K+ + I S D Y+DM Y V YSTF I + S ++T ++
Sbjct: 278 MDPKAKAQLIESCDLYYDMSYSVAYSTF-----ANISSENGQSGSDTASGISSDDVDLET 332
Query: 196 PNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEA 255
+ P + LLDLYSGCGGMSTGLCLGA LS L TRWA+D + AC+SLK NHP+
Sbjct: 333 SSSMPTRT-ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQT 391
Query: 256 QVRNEAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSP 315
+VRNE A++FL L+KEW LCK++ Q V N +S + D
Sbjct: 392 EVRNEKADEFLALLKEWAVLCKKYV--------------QDVDSNLASS----EDQADE- 432
Query: 316 KVTGNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRG 375
+SP D D E+ V ++V ICYG + + G
Sbjct: 433 ---------------------------DSPLDKD----EFVVEKLVGICYGGSDR--ENG 459
Query: 376 LNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQG 435
+ FKV W+GY ED+WEPI+ L +CP++I+EFV+ G K KILPLPGDVDVICGGPPCQG
Sbjct: 460 IYFKVQWEGYGPEEDTWEPIDNLSDCPQKIREFVQEGHKRKILPLPGDVDVICGGPPCQG 519
Query: 436 ISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSR 495
ISG+NR+RN D PL DE+N+Q+V FMDIV +LKPKYVLMENVVDILKF LG+YALS
Sbjct: 520 ISGFNRYRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSC 579
Query: 496 LVHMKYQARFGIIAAGCYGLPQFRLR 521
LV MKYQAR G++ AGCYGLPQFR+R
Sbjct: 580 LVAMKYQARLGMMVAGCYGLPQFRMR 605
>gi|409107274|pdb|4FT2|A Chain A, Crystal Structure Of Zea Mays Zmet2 In Complex
H3(1-15)k9me2 Peptide And Sah
gi|409107275|pdb|4FT2|B Chain B, Crystal Structure Of Zea Mays Zmet2 In Complex
H3(1-15)k9me2 Peptide And Sah
gi|409107277|pdb|4FT4|B Chain B, Crystal Structure Of Zea Mays Zmet2 In Complex
H3(1-32)k9me2 Peptide And Sah
gi|409107278|pdb|4FT4|A Chain A, Crystal Structure Of Zea Mays Zmet2 In Complex
H3(1-32)k9me2 Peptide And Sah
Length = 784
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/506 (46%), Positives = 303/506 (59%), Gaps = 69/506 (13%)
Query: 25 GAYSDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIK-GEGTQKHIGKILEFFKTTDGE 83
A D+E+++ CHY A++ ++ LGD Y+K GE +IG+I EFF+ TD
Sbjct: 32 AAKKPDEEEEL--KARCHYRSAKVDNVVYCLGDDVYVKAGENEADYIGRITEFFEGTDQC 89
Query: 84 EYFRVQWFYRAEDTVMKEAADF------HDRKRLFYSTVMNDNPVDCIISKVIVAQIPPK 137
YF +WF+RAEDTV+ HD +R+F S NDN +DCIISKV + + P
Sbjct: 90 HYFTCRWFFRAEDTVINSLVSISVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPN 149
Query: 138 IGLKSNS--IPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENM 195
+ K+ + I S D Y+DM Y V YSTF I + S ++T ++
Sbjct: 150 MDPKAKAQLIESCDLYYDMSYSVAYSTF-----ANISSENGQSGSDTASGISSDDVDLET 204
Query: 196 PNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEA 255
+ P + LLDLYSGCGGMSTGLCLGA LS L TRWA+D + AC+SLK NHP+
Sbjct: 205 SSSMPTRTA-TLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQT 263
Query: 256 QVRNEAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSP 315
+VRNE A++FL L+KEW LCK++ Q V N +S + D
Sbjct: 264 EVRNEKADEFLALLKEWAVLCKKYV--------------QDVDSNLASS----EDQADE- 304
Query: 316 KVTGNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRG 375
+SP D D E+ V ++V ICYG + + G
Sbjct: 305 ---------------------------DSPLDKD----EFVVEKLVGICYGGSDR--ENG 331
Query: 376 LNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQG 435
+ FKV W+GY ED+WEPI+ L +CP++I+EFV+ G K KILPLPGDVDVICGGPPCQG
Sbjct: 332 IYFKVQWEGYGPEEDTWEPIDNLSDCPQKIREFVQEGHKRKILPLPGDVDVICGGPPCQG 391
Query: 436 ISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSR 495
ISG+NR+RN D PL DE+N+Q+V FMDIV +LKPKYVLMENVVDILKF LG+YALS
Sbjct: 392 ISGFNRYRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSC 451
Query: 496 LVHMKYQARFGIIAAGCYGLPQFRLR 521
LV MKYQAR G++ AGCYGLPQFR+R
Sbjct: 452 LVAMKYQARLGMMVAGCYGLPQFRMR 477
>gi|413919506|gb|AFW59438.1| DNA (cytosine-5)-methyltransferase 1 [Zea mays]
Length = 915
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 234/506 (46%), Positives = 303/506 (59%), Gaps = 69/506 (13%)
Query: 25 GAYSDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIK-GEGTQKHIGKILEFFKTTDGE 83
A D+E+++ CHY A++ ++ LGD Y+K GE +IG+I EFF+ TD
Sbjct: 163 AAKKPDEEEEL--KARCHYRSAKVDNVVYCLGDDVYVKAGENEADYIGRITEFFEGTDQC 220
Query: 84 EYFRVQWFYRAEDTVMKEAADF------HDRKRLFYSTVMNDNPVDCIISKVIVAQIPPK 137
YF +WF+RAEDTV+ HD +R+F S NDN +DCIISKV + + P
Sbjct: 221 HYFTCRWFFRAEDTVINSLVSISVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPN 280
Query: 138 IGLKSNS--IPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENM 195
+ K+ + I S D Y+DM Y V YSTF I + S ++T ++
Sbjct: 281 MDPKAKAQLIESCDLYYDMSYSVAYSTF-----ANISSENGQSDSDTASGISSDDVDLET 335
Query: 196 PNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEA 255
+ P + LLDLYSGCGGMSTGLCLGA LS L TRWA+D + AC+SLK NHP+
Sbjct: 336 SSSMPTRT-ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQT 394
Query: 256 QVRNEAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSP 315
+VRNE A++FL L+KEW LCK++ Q V N +S + D
Sbjct: 395 EVRNEKADEFLALLKEWAVLCKKYV--------------QDVDSNLASS----EDQADE- 435
Query: 316 KVTGNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRG 375
+SP D D E+ V ++V ICYG + + G
Sbjct: 436 ---------------------------DSPLDKD----EFVVEKLVGICYGGSDR--ENG 462
Query: 376 LNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQG 435
+ FKV W+GY ED+WEPI+ L +CP++I++FV+ G K KILPLPGDVDVICGGPPCQG
Sbjct: 463 IYFKVQWEGYGPEEDTWEPIDNLSDCPQKIRDFVQEGHKRKILPLPGDVDVICGGPPCQG 522
Query: 436 ISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSR 495
ISG+NR+RN D PL DE+N+Q+V FMDIV +LKPKYVLMENVVDILKF LG+YALS
Sbjct: 523 ISGFNRYRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSC 582
Query: 496 LVHMKYQARFGIIAAGCYGLPQFRLR 521
LV MKYQAR G++ AGCYGLPQFR+R
Sbjct: 583 LVAMKYQARLGMMVAGCYGLPQFRMR 608
>gi|18542936|gb|AAL75761.1| Putative DNA cytosine methyltransferase MET2a [Oryza sativa
Japonica Group]
Length = 719
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 239/502 (47%), Positives = 297/502 (59%), Gaps = 85/502 (16%)
Query: 30 DDEDKIVSNVECHYAQARIGECIFDLGDCAYIKGEGTQK-HIGKILEFFKTTDGEEYFRV 88
D+E+ I CHY+ A++ ++ L D Y+K E + +IG+I EFF+ TD YF
Sbjct: 153 DEEEDI--KARCHYSSAKVDGTLYCLHDDVYVKAEEDKADYIGRITEFFEGTDHCHYFTC 210
Query: 89 QWFYRAEDTV----MKEAAD--FHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIG--L 140
+WF+RAEDTV M E AD HD KR+F S NDN +DCIISKV + I P +
Sbjct: 211 RWFFRAEDTVISSIMMENADDEKHDLKRVFLSEEKNDNVLDCIISKVKIVYIDPNMESEA 270
Query: 141 KSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGP 200
K+ + D Y+DM Y V YSTF + GK+ V + S+
Sbjct: 271 KARRLADCDLYYDMSYTVAYSTFANIPLGKV-----------VSDSEASSV--------- 310
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNE 260
+ LLDLYSGCGGMSTGLCLGA L+ NL TRWA+D + ACESLK NHP +VRNE
Sbjct: 311 --GKATLLDLYSGCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHPRTEVRNE 368
Query: 261 AAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGN 320
A++FL L+K W LC + ++ +S + N D
Sbjct: 369 KADEFLALLKGWHSLCDEYVKKDID----------------FSSAGASENEEDD------ 406
Query: 321 SVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKR-GLNFK 379
+ P + D E+ V ++ ICYG SG+ GL FK
Sbjct: 407 ----------------------DEPLEKD----EFVVEKLAGICYGG---SGREDGLYFK 437
Query: 380 VHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGY 439
V WKGY ED+WEPIE LR+CP +IKEFV+ G++ KILPLPGDVDVICGGPPCQGISG+
Sbjct: 438 VQWKGYGREEDTWEPIENLRDCPLKIKEFVQEGYRRKILPLPGDVDVICGGPPCQGISGF 497
Query: 440 NRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHM 499
NRFRN PL DE+N+Q+V FMDIV +LKPKYVLMENVVDILKF LGRYALSRLV M
Sbjct: 498 NRFRNRKEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGRYALSRLVAM 557
Query: 500 KYQARFGIIAAGCYGLPQFRLR 521
KYQAR G++ AGCYGLPQFR+R
Sbjct: 558 KYQARLGMMVAGCYGLPQFRMR 579
>gi|242065598|ref|XP_002454088.1| hypothetical protein SORBIDRAFT_04g024430 [Sorghum bicolor]
gi|241933919|gb|EES07064.1| hypothetical protein SORBIDRAFT_04g024430 [Sorghum bicolor]
Length = 770
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/490 (46%), Positives = 289/490 (58%), Gaps = 67/490 (13%)
Query: 41 CHYAQARIGECIFDLGDCAYIK-GEGTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTVM 99
CHY A++ ++ LGD Y+K GE +IG+I EFF+ TD YF WF+RAEDTV+
Sbjct: 181 CHYRSAKVDNVVYCLGDDVYVKAGENEADYIGRITEFFEGTDRCHYFTCHWFFRAEDTVI 240
Query: 100 KEA------ADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNS--IPSSDFY 151
HD +R+F S NDN +DCIISKV + ++ P I K+ + I D Y
Sbjct: 241 NSLVSINVDGHMHDPRRVFLSEEKNDNVLDCIISKVKIVRVDPNIDPKAKAQLIEHCDLY 300
Query: 152 FDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLY 211
+DM Y V YSTF I + S +ET + + P + LLDLY
Sbjct: 301 YDMSYSVAYSTF-----ANISSENGQSGSETASGISDGDVDLETSSSMPERT-ATLLDLY 354
Query: 212 SGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKE 271
SGCGGMSTGLCLGA LS L TRWA+D + AC+SLK NHP+ +VRNE A++FL L+KE
Sbjct: 355 SGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRNEKADEFLALLKE 414
Query: 272 WQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPRVTRSS 331
W LC+++ Q + N S
Sbjct: 415 WAVLCEKYV--------------QDIDSNLAGSED------------------------- 435
Query: 332 VNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSEDS 391
+ SP D D E+ V +++ ICYG K G+ FKV W+GY ED+
Sbjct: 436 -------QEDEGSPLDKD----EFVVEKLIGICYGGSGR--KNGIYFKVQWEGYGPEEDT 482
Query: 392 WEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDD 451
WEPI+ L +CP +I+EFV+ G + KILPLPGDVDVICGGPPCQGISG+NRFRN D PL D
Sbjct: 483 WEPIDNLSDCPLKIREFVQEGHRRKILPLPGDVDVICGGPPCQGISGFNRFRNRDEPLKD 542
Query: 452 ERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAG 511
E+N+Q+V FMDIV +LKPKYVLMENVVDILKF LG+YALS LV MKYQAR G++ AG
Sbjct: 543 EKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVAMKYQARLGMMVAG 602
Query: 512 CYGLPQFRLR 521
CYGLPQFR+R
Sbjct: 603 CYGLPQFRMR 612
>gi|359490000|ref|XP_002274960.2| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Vitis
vinifera]
Length = 1298
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/349 (60%), Positives = 244/349 (69%), Gaps = 42/349 (12%)
Query: 173 DLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNL 232
+LS +C +TV F M +H P+K ELALLD+YSGCGGMSTGLCLGAKLS +L
Sbjct: 697 NLSTSACLKTVHMNGIKPEFNRMSSHKPYKPELALLDIYSGCGGMSTGLCLGAKLSGVDL 756
Query: 233 VTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQKLCKRFAVNIVERENKQRS 292
VTRWALD +KSACESLKLNHPE Q+RNE+AEDFL+L+KEW KLCKR+ V V+ K
Sbjct: 757 VTRWALDINKSACESLKLNHPETQIRNESAEDFLDLLKEWDKLCKRYVVKDVQESLK--- 813
Query: 293 MSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPP 352
VNS RV R++ VNS P
Sbjct: 814 ---------VNS---------------------RVLRAA---------KVNSKTGNKSPS 834
Query: 353 GEYEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNG 412
GE+EVA ++DICYGDP SGK GL F+ W G+ SED+WEPIEGL C + I++FV G
Sbjct: 835 GEFEVASLIDICYGDPTNSGKHGLKFQARWAGHGPSEDTWEPIEGLSKCQDLIQDFVLKG 894
Query: 413 FKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYV 472
FK+KILP PGD DVICGGPPCQGISGYNR RN DSP DDERNRQI++FMDIV FLKPKYV
Sbjct: 895 FKAKILPRPGDADVICGGPPCQGISGYNRHRNADSPFDDERNRQIIVFMDIVNFLKPKYV 954
Query: 473 LMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
LMENVVDIL+F K S+GRYALSRLV M YQAR GI+AAGCYGLPQ+RLR
Sbjct: 955 LMENVVDILQFAKGSVGRYALSRLVRMNYQARLGIMAAGCYGLPQYRLR 1003
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/140 (60%), Positives = 115/140 (82%), Gaps = 1/140 (0%)
Query: 28 SDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIKGE-GTQKHIGKILEFFKTTDGEEYF 86
+DD+ED++V +V+CHY+QA I +CIF+LGDCAY+KG+ G + +IG+ILEFFKT D E+YF
Sbjct: 107 NDDEEDELVLDVKCHYSQAEIEKCIFNLGDCAYVKGKKGGRNYIGRILEFFKTMDDEDYF 166
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
RVQWF+R EDTVM+E FH++KRLFYS ++NDN +DCI+SKV + QI P + LKS SI
Sbjct: 167 RVQWFFRPEDTVMEEEGAFHEKKRLFYSNLVNDNLLDCIVSKVNIIQITPSVNLKSKSIL 226
Query: 147 SSDFYFDMEYCVEYSTFRTL 166
DFY+DM+Y ++YSTF T+
Sbjct: 227 PCDFYYDMKYLIDYSTFCTM 246
>gi|226088550|dbj|BAH37020.1| chromomethylase OsMET2b [Oryza sativa Japonica Group]
Length = 690
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/487 (46%), Positives = 292/487 (59%), Gaps = 58/487 (11%)
Query: 48 IGECIFDLGDCAYIK-GEGTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTV-----MKE 101
+ + I+ L D Y+K G + +IG+I EFF+ D YF QWF+R DTV +K
Sbjct: 1 VDDEIYHLDDDVYVKAGPDEENYIGRITEFFEGVDRGSYFSCQWFFRTADTVISSKLLKV 60
Query: 102 AADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIG--LKSNSIPSSDFYFDMEYCVE 159
H+ KR+F S NDN ++CI+SKV +A + P + ++++I D Y+DM Y V
Sbjct: 61 HDHRHNHKRVFLSKEKNDNLIECIVSKVKIAHVDPNMTPQARAHAISDCDLYYDMSYSVA 120
Query: 160 YSTFRTLLTGKIHDL-----SLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGC 214
YSTF L L S SC + ++ + + + +LLDLYSGC
Sbjct: 121 YSTFANLPADNDGALGSEATSNISCDDADNSSKGKLSADIVAPYSEQTETASLLDLYSGC 180
Query: 215 GGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQK 274
G MSTGLCLG S NL TRWA+D +K AC LK NHP +QVRNE EDFL L+++W
Sbjct: 181 GAMSTGLCLGFAFSGINLETRWAVDINKYACACLKHNHPYSQVRNEKTEDFLALIQQWDA 240
Query: 275 LCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPRVTRSSVNS 334
LC+++ V+ +N PSI D P VN
Sbjct: 241 LCRKYVVH----------------KNDTLEPSI---------------DMPLNDADDVNE 269
Query: 335 PRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEP 394
P +P ++V +++ICYGDP+ +GK GL FKV WKGY S D+WEP
Sbjct: 270 P--------------LPEDIFDVEELLEICYGDPSNTGKNGLWFKVRWKGYDPSYDTWEP 315
Query: 395 IEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERN 454
I+GL +CPERIKEFV G K ILPLPG VDVICGGPPCQGISG+NRFR + PL+DE+N
Sbjct: 316 IDGLSDCPERIKEFVEKGHKENILPLPGAVDVICGGPPCQGISGFNRFRKHNDPLEDEKN 375
Query: 455 RQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYG 514
+Q+V+FMDIV++L+PKYVLMENVVDILKF LGRYA+S LV M YQAR G++AAG YG
Sbjct: 376 KQLVVFMDIVKYLRPKYVLMENVVDILKFADGFLGRYAMSCLVAMNYQARLGMMAAGYYG 435
Query: 515 LPQFRLR 521
LPQFR+R
Sbjct: 436 LPQFRMR 442
>gi|218188370|gb|EEC70797.1| hypothetical protein OsI_02246 [Oryza sativa Indica Group]
Length = 907
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 239/504 (47%), Positives = 297/504 (58%), Gaps = 67/504 (13%)
Query: 30 DDEDKIVSNVECHYAQARIGECIFDLGDCAYIKGEGTQK-HIGKILEFFKTTDGEEYFRV 88
D+E+ I CHY+ A++ ++ L D Y+K E + +IG+I EFF+ TD YF
Sbjct: 153 DEEEDI--KARCHYSSAKVDGTLYCLHDDVYVKAEEDKADYIGRITEFFEGTDHCRYFTC 210
Query: 89 QWFYRAEDTV----MKEAAD--FHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIG--L 140
+WF+RAEDTV M E AD HD KR+F S NDN +DCIISKV + I P +
Sbjct: 211 RWFFRAEDTVISSIMMENADDEKHDLKRVFLSEEKNDNVLDCIISKVKIVHIDPNMESEA 270
Query: 141 KSNSIPSSDFYFDMEYCVEYSTFRT--LLTGKIHDLSLPSCTETVPTTATSTFFENMPNH 198
K+ + D Y+DM Y V YSTF L G + + ++ +
Sbjct: 271 KARRLADCDLYYDMSYTVAYSTFANIPLENGASGSDTASDISSDDVDSSKGKVVSDSEAS 330
Query: 199 GPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVR 258
KA LLDLYSGCGGMSTGLCLGA L+ NL TRWA+D + ACESLK NHP +VR
Sbjct: 331 SVGKA--TLLDLYSGCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHPRTEVR 388
Query: 259 NEAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVT 318
NE A++FL L+K W LC + ++ +S + N D
Sbjct: 389 NEKADEFLALLKGWHSLCDEYVKKDID----------------FSSAGASENEEDD---- 428
Query: 319 GNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKR-GLN 377
+ P + D E+ V ++ ICYG SG+ GL
Sbjct: 429 ------------------------DEPLEKD----EFVVEKLAGICYGG---SGREDGLY 457
Query: 378 FKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGIS 437
FKV WKGY ED+WEPIE LR+CP +IKEFV+ G++ KILPLPGDVDVICGGPPCQGIS
Sbjct: 458 FKVQWKGYGREEDTWEPIENLRDCPLKIKEFVQEGYRRKILPLPGDVDVICGGPPCQGIS 517
Query: 438 GYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLV 497
G+NRFRN PL DE+N+Q+V FMDIV +LKPKYVLMENVVDILKF LGRYALSRLV
Sbjct: 518 GFNRFRNRKEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGRYALSRLV 577
Query: 498 HMKYQARFGIIAAGCYGLPQFRLR 521
MKYQAR G++ AGCYGLPQFR+R
Sbjct: 578 AMKYQARLGMMVAGCYGLPQFRMR 601
>gi|226088548|dbj|BAH37019.1| chromomethylase OsMET2a [Oryza sativa Japonica Group]
Length = 907
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 239/504 (47%), Positives = 297/504 (58%), Gaps = 67/504 (13%)
Query: 30 DDEDKIVSNVECHYAQARIGECIFDLGDCAYIKGEGTQK-HIGKILEFFKTTDGEEYFRV 88
D+E+ I CHY+ A++ ++ L D Y+K E + +IG+I EFF+ TD YF
Sbjct: 153 DEEEDI--KARCHYSSAKVDGTLYCLHDDVYVKAEEDKADYIGRITEFFEGTDHCHYFTC 210
Query: 89 QWFYRAEDTV----MKEAAD--FHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIG--L 140
+WF+RAEDTV M E AD HD KR+F S NDN +DCIISKV + I P +
Sbjct: 211 RWFFRAEDTVISSIMMENADDEKHDLKRVFLSEEKNDNVLDCIISKVKIVYIDPNMESEA 270
Query: 141 KSNSIPSSDFYFDMEYCVEYSTFRT--LLTGKIHDLSLPSCTETVPTTATSTFFENMPNH 198
K+ + D Y+DM Y V YSTF L G + + ++ +
Sbjct: 271 KARRLADCDLYYDMSYTVAYSTFANIPLENGASGSDTASDISSDDVDSSKGKVVSDSEAS 330
Query: 199 GPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVR 258
KA LLDLYSGCGGMSTGLCLGA L+ NL TRWA+D + ACESLK NHP +VR
Sbjct: 331 SVGKA--TLLDLYSGCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHPRTEVR 388
Query: 259 NEAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVT 318
NE A++FL L+K W LC + ++ +S + N D
Sbjct: 389 NEKADEFLALLKGWHSLCDEYVKKDID----------------FSSAGASENEEDD---- 428
Query: 319 GNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKR-GLN 377
+ P + D E+ V ++ ICYG SG+ GL
Sbjct: 429 ------------------------DEPLEKD----EFVVEKLAGICYGG---SGREDGLY 457
Query: 378 FKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGIS 437
FKV WKGY ED+WEPIE LR+CP +IKEFV+ G++ KILPLPGDVDVICGGPPCQGIS
Sbjct: 458 FKVQWKGYGREEDTWEPIENLRDCPLKIKEFVQEGYRRKILPLPGDVDVICGGPPCQGIS 517
Query: 438 GYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLV 497
G+NRFRN PL DE+N+Q+V FMDIV +LKPKYVLMENVVDILKF LGRYALSRLV
Sbjct: 518 GFNRFRNRKEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGRYALSRLV 577
Query: 498 HMKYQARFGIIAAGCYGLPQFRLR 521
MKYQAR G++ AGCYGLPQFR+R
Sbjct: 578 AMKYQARLGMMVAGCYGLPQFRMR 601
>gi|411012959|gb|AFV99136.1| CMT-type cytosine DNA-methyltransferase 3b [Malus x domestica]
Length = 1096
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/500 (44%), Positives = 307/500 (61%), Gaps = 41/500 (8%)
Query: 28 SDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIKGEGTQKHIGKILEFFKTTDGEEYFR 87
S+DDED I CHY +A + +DL D A+ GE + +I KI+E F+ G YF
Sbjct: 209 SNDDEDII--QARCHYTKALVDGINYDLYDDAH-SGEKEEPYICKIVEMFEAIGGLLYFT 265
Query: 88 VQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIG--LKSNSI 145
QW+YR+ DTV+K R+F+S V +DNP++C++ K+ + ++ + LKS SI
Sbjct: 266 AQWYYRSRDTVIKHCTTVA-CGRVFFSDVRDDNPLNCLVEKLHIVRLTLNVDEDLKSKSI 324
Query: 146 PSSDFYFDMEYCVEYSTFRTLLTGKIH---DLSLPSCTETVPTTATSTFFENMPNHGPHK 202
P ++Y D +Y + YSTF L + D S S + V S +PN K
Sbjct: 325 PVCNYYCDTKYLLPYSTFVNLXAENMQTGSDDSTISVEDDV--CLDSEVDSKLPNGERAK 382
Query: 203 AELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAA 262
+E+ LLDLYSGCG MSTGLCLGA L+ NLVTRWA+D +K AC+SL NHPE +VRNEAA
Sbjct: 383 SEVRLLDLYSGCGAMSTGLCLGAHLANVNLVTRWAVDYNKYACKSLAQNHPETEVRNEAA 442
Query: 263 EDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRN-SVNSPSITRNSVDSPKVTGNS 321
EDFL ++K W+KLC + +VE +N + + + + + V+GN
Sbjct: 443 EDFLTMLKAWRKLC--MCLKLVENDNLEEDVDKSILDFFGKEDDEEEEEDEEEEDVSGNV 500
Query: 322 VDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKVH 381
+ V +EV ++ +C+GDP ++ K+G+ FK+H
Sbjct: 501 KNDSEV---------------------------FEVDCVIGVCFGDPKKTEKKGIYFKIH 533
Query: 382 WKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNR 441
WKGY ED+WEP+ L +C + IK+F+ G++ K LPLPGDVDV+CGGPPCQG+SG+NR
Sbjct: 534 WKGYGPXEDTWEPMNELEHCKQAIKKFITEGYRLKKLPLPGDVDVVCGGPPCQGVSGFNR 593
Query: 442 FRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKY 501
FRN +SPL D++N+Q+ ++MDIV +L PK+VLMENVVDILKF LGRYAL RLV M Y
Sbjct: 594 FRNTESPLADDKNQQLEVYMDIVRYLXPKFVLMENVVDILKFADGFLGRYALGRLVDMNY 653
Query: 502 QARFGIIAAGCYGLPQFRLR 521
Q R G++AAG YGLPQFR+R
Sbjct: 654 QVRMGMMAAGAYGLPQFRMR 673
>gi|222612319|gb|EEE50451.1| hypothetical protein OsJ_30466 [Oryza sativa Japonica Group]
Length = 907
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 239/504 (47%), Positives = 297/504 (58%), Gaps = 67/504 (13%)
Query: 30 DDEDKIVSNVECHYAQARIGECIFDLGDCAYIKGEGTQK-HIGKILEFFKTTDGEEYFRV 88
D+E+ I CHY+ A++ ++ L D Y+K E + +IG+I EFF+ TD YF
Sbjct: 153 DEEEDI--KARCHYSSAKVDGTLYCLHDDVYVKAEEDKADYIGRITEFFEGTDHCHYFTC 210
Query: 89 QWFYRAEDTV----MKEAAD--FHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIG--L 140
+WF+RAEDTV M E AD HD KR+F S NDN +DCIISKV + I P +
Sbjct: 211 RWFFRAEDTVISSIMMENADDEKHDLKRVFLSEEKNDNVLDCIISKVKIVYIDPNMESEA 270
Query: 141 KSNSIPSSDFYFDMEYCVEYSTFRT--LLTGKIHDLSLPSCTETVPTTATSTFFENMPNH 198
K+ + D Y+DM Y V YSTF L G + + ++ +
Sbjct: 271 KARRLADCDLYYDMSYTVAYSTFANIPLENGASGSDTASDISSDDVDSSKGKVVSDSEAS 330
Query: 199 GPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVR 258
KA LLDLYSGCGGMSTGLCLGA L+ NL TRWA+D + ACESLK NHP +VR
Sbjct: 331 SVGKA--TLLDLYSGCGGMSTGLCLGAALAGLNLETRWAVDFNSFACESLKYNHPRTEVR 388
Query: 259 NEAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVT 318
NE A++FL L+K W LC + ++ +S + N D
Sbjct: 389 NEKADEFLALLKGWHSLCDEYVKKDID----------------FSSAGASENEEDD---- 428
Query: 319 GNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKR-GLN 377
+ P + D E+ V ++ ICYG SG+ GL
Sbjct: 429 ------------------------DEPLEKD----EFVVEKLAGICYGG---SGREDGLY 457
Query: 378 FKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGIS 437
FKV WKGY ED+WEPIE LR+CP +IKEFV+ G++ KILPLPGDVDVICGGPPCQGIS
Sbjct: 458 FKVQWKGYGREEDTWEPIENLRDCPLKIKEFVQEGYRRKILPLPGDVDVICGGPPCQGIS 517
Query: 438 GYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLV 497
G+NRFRN PL DE+N+Q+V FMDIV +LKPKYVLMENVVDILKF LGRYALSRLV
Sbjct: 518 GFNRFRNRKEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGRYALSRLV 577
Query: 498 HMKYQARFGIIAAGCYGLPQFRLR 521
MKYQAR G++ AGCYGLPQFR+R
Sbjct: 578 AMKYQARLGMMVAGCYGLPQFRMR 601
>gi|2865428|gb|AAC02667.1| chromomethylase [Arabidopsis thaliana]
Length = 560
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/501 (42%), Positives = 308/501 (61%), Gaps = 54/501 (10%)
Query: 25 GAYSDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIKG-EGTQKHIGKILEFFKTTDGE 83
G +D+E I+ +CH+ +A + + +L D Y+ G G K I K++E F+ DG
Sbjct: 55 GGKKEDEE--IIKQAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGV 112
Query: 84 EYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIP-PKIG--L 140
Y R +W+YR EDT+++ + KR+F S NDNP+ CI SKV +A++P PKI +
Sbjct: 113 PYCRFRWYYRPEDTLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRI 172
Query: 141 KSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGP 200
+ IP D+Y+DM+Y V Y F + G + ++ + + FEN+
Sbjct: 173 EQRVIPPCDYYYDMKYEVPYLNFTSTDDGSDA-------SSSLSSDSALNCFENL----- 220
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNE 260
HK E LLDLYSGCG MSTG C+GA +S L+T+W++D +K AC+SLKLNHPE +VRNE
Sbjct: 221 HKDEKFLLDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNE 280
Query: 261 AAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGN 320
AAEDFL L+KEW++LC++F+ +V S+S+ + I S +
Sbjct: 281 AAEDFLALLKEWKRLCEKFS--LVSSTEPVESISELEDEEVEENDDIDEASTGA------ 332
Query: 321 SVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKV 380
++ PGE+EV + + I +GDP +G++ L V
Sbjct: 333 ----------------------------ELEPGEFEVEKFLGIMFGDPQGTGEKTLQLMV 364
Query: 381 HWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYN 440
WKGY++S D+WEP GL NC E++KE+V +GFKS +LPLPG V +CGGPPCQGISGYN
Sbjct: 365 RWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGTVYTVCGGPPCQGISGYN 424
Query: 441 RFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMK 500
R+RN ++PL+D++N+Q+++F+DI++FLKP YVLMENVVD+L+F K L R+A++ V M
Sbjct: 425 RYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMN 484
Query: 501 YQARFGIIAAGCYGLPQFRLR 521
YQ R G++AAG YGLPQ R R
Sbjct: 485 YQTRLGMMAAGSYGLPQLRNR 505
>gi|75157426|sp|Q8LPU5.1|CMT3_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 3; AltName:
Full=Chromomethylase 3; AltName: Full=DNA
methyltransferase 105
gi|20977600|gb|AAM28227.1| DNA methyltransferase 105 [Zea mays]
gi|414585461|tpg|DAA36032.1| TPA: DNA (cytosine-5)-methyltransferase 2 [Zea mays]
Length = 915
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/503 (45%), Positives = 293/503 (58%), Gaps = 73/503 (14%)
Query: 29 DDDEDKIVSNVECHYAQARIGECIFDLGDCAYIK-GEGTQKHIGKILEFFKTTDGEEYFR 87
+DDE K CHY A++ ++ LGD Y+K GE +IG+I EFF+ TD YF
Sbjct: 170 EDDELK----ARCHYRSAKVDNIVYCLGDDVYVKAGENEADYIGRITEFFEGTDRCHYFT 225
Query: 88 VQWFYRAEDTVMKEAADF------HDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLK 141
+WF+RAEDTV+ HD +R+F S NDN +DCIISKV + + P + K
Sbjct: 226 CRWFFRAEDTVINSLVSINVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPK 285
Query: 142 SNS--IPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHG 199
+ + I D Y+DM Y V YSTF I + S +ET ++ ++
Sbjct: 286 AKAQLIEHCDLYYDMSYSVAYSTF-----ANISSENGQSGSETASGISSDDAGLETSSNM 340
Query: 200 PHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRN 259
P + LLDLYSGCGGMSTGLCLGA LS L TRWA+D + AC+SLK NHP+ +VRN
Sbjct: 341 PERT-ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRN 399
Query: 260 EAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTG 319
E A++FL L+KEW LC ++ + Q V N S
Sbjct: 400 EKADEFLALLKEWAVLC-------------EKYVHQDVDSNLAGS--------------- 431
Query: 320 NSVDSPRVTRSSVNSPRVTRNSVNSPRDVD-IPPGEYEVARIVDICYGDPNESGKRGLNF 378
D D + E+ V +++ I Y K+G+ F
Sbjct: 432 -----------------------EDQEDADTLDKDEFVVQKLIGIRYDGTGR--KKGVYF 466
Query: 379 KVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISG 438
KV W+GY ED+WEPI+ L +CP +I+EFV+ G K KILPLPGDVDVICGGPPCQGISG
Sbjct: 467 KVQWEGYGPEEDTWEPIDNLSDCPLKIREFVQEGRKRKILPLPGDVDVICGGPPCQGISG 526
Query: 439 YNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVH 498
+NRFRN D PL DE+N+Q+V FMDIV +LKPKYVLMENVVDILKF LG+YALS LV
Sbjct: 527 FNRFRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVA 586
Query: 499 MKYQARFGIIAAGCYGLPQFRLR 521
MKYQAR G++ AGCYGLPQFR+R
Sbjct: 587 MKYQARLGMMVAGCYGLPQFRMR 609
>gi|357140240|ref|XP_003571678.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3-like [Brachypodium
distachyon]
Length = 898
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/490 (46%), Positives = 287/490 (58%), Gaps = 72/490 (14%)
Query: 41 CHYAQARIGECIFDLGDCAYI-KGEGTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTVM 99
CHY A++ E I++LGD Y+ GE +IG+I EFF+ D + YF +WF+R EDTV+
Sbjct: 166 CHYRSAKVDEAIYNLGDDVYVMAGENEPHYIGRITEFFEGIDKKCYFTCRWFFRPEDTVI 225
Query: 100 KEAA----DFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIG--LKSNSIPSSDFYFD 153
A HD KR+F S NDN ++CI+ KV + + P + K+ + SD Y+D
Sbjct: 226 STAKFVNDHTHDPKRVFLSEEKNDNVLECIVLKVNIVHVDPNMDSEAKAQLVAESDLYYD 285
Query: 154 MEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELA-LLDLYS 212
M Y V YSTF + +G C T S ++ + A LLDLYS
Sbjct: 286 MSYSVAYSTFANITSGNF-------CY----TNDNSGISSDVDSEAASPVRTAVLLDLYS 334
Query: 213 GCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEW 272
GCGGMSTGLCLG+ L+ L TRWA+D + AC+SLK NHP +VRNE AEDFL L+KEW
Sbjct: 335 GCGGMSTGLCLGSALAGLKLETRWAVDLNSFACKSLKYNHPGTEVRNEKAEDFLALLKEW 394
Query: 273 QKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPRVTRSSV 332
LC + V GN+ D
Sbjct: 395 AILCDTY-------------------------------------VHGNNSDP-------- 409
Query: 333 NSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGK-RGLNFKVHWKGYSTSEDS 391
SP + P D E+ V ++++ICYG SG+ + + FKV WKGY ED+
Sbjct: 410 ASPSEDEEEDDEPLGKD----EFVVEKLLEICYGG---SGREKAIYFKVQWKGYGPEEDT 462
Query: 392 WEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDD 451
WEPI L +CP +IKEFV+ G K ILPLPGDV+VICGGPPCQGISG+NRFRN PL D
Sbjct: 463 WEPIGNLSDCPLKIKEFVQEGHKRNILPLPGDVEVICGGPPCQGISGFNRFRNRKEPLKD 522
Query: 452 ERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAG 511
E+N+Q+V FMDIV +LKPK+VLMENVVDILKF LGRYALSRLV + YQAR GI+ AG
Sbjct: 523 EKNQQMVTFMDIVSYLKPKFVLMENVVDILKFADGYLGRYALSRLVSLNYQARLGIMVAG 582
Query: 512 CYGLPQFRLR 521
CYGLPQFR+R
Sbjct: 583 CYGLPQFRMR 592
>gi|414585462|tpg|DAA36033.1| TPA: hypothetical protein ZEAMMB73_314017 [Zea mays]
Length = 849
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/503 (45%), Positives = 293/503 (58%), Gaps = 73/503 (14%)
Query: 29 DDDEDKIVSNVECHYAQARIGECIFDLGDCAYIK-GEGTQKHIGKILEFFKTTDGEEYFR 87
+DDE K CHY A++ ++ LGD Y+K GE +IG+I EFF+ TD YF
Sbjct: 170 EDDELK----ARCHYRSAKVDNIVYCLGDDVYVKAGENEADYIGRITEFFEGTDRCHYFT 225
Query: 88 VQWFYRAEDTVMKEAADF------HDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLK 141
+WF+RAEDTV+ HD +R+F S NDN +DCIISKV + + P + K
Sbjct: 226 CRWFFRAEDTVINSLVSINVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPK 285
Query: 142 SNS--IPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHG 199
+ + I D Y+DM Y V YSTF I + S +ET ++ ++
Sbjct: 286 AKAQLIEHCDLYYDMSYSVAYSTF-----ANISSENGQSGSETASGISSDDAGLETSSNM 340
Query: 200 PHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRN 259
P + LLDLYSGCGGMSTGLCLGA LS L TRWA+D + AC+SLK NHP+ +VRN
Sbjct: 341 PERT-ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRN 399
Query: 260 EAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTG 319
E A++FL L+KEW LC ++ + Q V N S
Sbjct: 400 EKADEFLALLKEWAVLC-------------EKYVHQDVDSNLAGS--------------- 431
Query: 320 NSVDSPRVTRSSVNSPRVTRNSVNSPRDVD-IPPGEYEVARIVDICYGDPNESGKRGLNF 378
D D + E+ V +++ I Y K+G+ F
Sbjct: 432 -----------------------EDQEDADTLDKDEFVVQKLIGIRYDGTGR--KKGVYF 466
Query: 379 KVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISG 438
KV W+GY ED+WEPI+ L +CP +I+EFV+ G K KILPLPGDVDVICGGPPCQGISG
Sbjct: 467 KVQWEGYGPEEDTWEPIDNLSDCPLKIREFVQEGRKRKILPLPGDVDVICGGPPCQGISG 526
Query: 439 YNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVH 498
+NRFRN D PL DE+N+Q+V FMDIV +LKPKYVLMENVVDILKF LG+YALS LV
Sbjct: 527 FNRFRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVA 586
Query: 499 MKYQARFGIIAAGCYGLPQFRLR 521
MKYQAR G++ AGCYGLPQFR+R
Sbjct: 587 MKYQARLGMMVAGCYGLPQFRMR 609
>gi|2766713|gb|AAB95485.1| chromomethylase [Arabidopsis thaliana]
gi|2865414|gb|AAC02659.1| chromomethylase [Arabidopsis thaliana]
Length = 791
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/501 (42%), Positives = 307/501 (61%), Gaps = 54/501 (10%)
Query: 25 GAYSDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIKG-EGTQKHIGKILEFFKTTDGE 83
G +D+E I+ +CH+ +A + + +L D Y+ G G K I K++E F+ DG
Sbjct: 55 GGKKEDEE--IIKQAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGV 112
Query: 84 EYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIP-PKIG--L 140
Y R +W+YR EDT+++ + KR+F S NDNP+ CI SKV +A++P PKI +
Sbjct: 113 PYCRFRWYYRPEDTLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRI 172
Query: 141 KSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGP 200
+ IP D+Y+DM+Y V Y F I + ++ + + FEN+
Sbjct: 173 EQRVIPPCDYYYDMKYEVPYLNF-------ISADDGSDASSSLSSDSALNCFENL----- 220
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNE 260
HK E LLDLYSGCG MSTG C+GA +S L+T+W++D +K AC+SLKLNHPE +VRNE
Sbjct: 221 HKDEKFLLDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNE 280
Query: 261 AAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGN 320
AAEDFL L+KEW++LC++F+ +V S+S+ + I S +
Sbjct: 281 AAEDFLALLKEWKRLCEKFS--LVSSTEPVESISELEDEEVEENDDIDEASTGA------ 332
Query: 321 SVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKV 380
++ PGE+EV + + I +GDP +G++ L V
Sbjct: 333 ----------------------------ELEPGEFEVEKFLGIMFGDPQGTGEKTLQLMV 364
Query: 381 HWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYN 440
WKGY++S D+WEP GL NC E++KE+V +GFKS +LPLPG V +CGGPPCQGISGYN
Sbjct: 365 RWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGTVYTVCGGPPCQGISGYN 424
Query: 441 RFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMK 500
R+RN ++PL+D++N+Q+++F+DI++FLKP YVLMENVVD+L+F K L R+A++ V M
Sbjct: 425 RYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMN 484
Query: 501 YQARFGIIAAGCYGLPQFRLR 521
YQ R G++AAG YGLPQ R R
Sbjct: 485 YQTRLGMMAAGSYGLPQLRNR 505
>gi|2865425|gb|AAC02665.1| chromomethylase [Arabidopsis thaliana]
gi|2865430|gb|AAC02668.1| chromomethylase [Arabidopsis thaliana]
Length = 560
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/501 (42%), Positives = 308/501 (61%), Gaps = 54/501 (10%)
Query: 25 GAYSDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIKG-EGTQKHIGKILEFFKTTDGE 83
G +D+E I+ +CH+ +A + + +L D Y+ G G K I K++E F+ DG
Sbjct: 55 GGKKEDEE--IIKQAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGV 112
Query: 84 EYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIP-PKIG--L 140
Y R +W+YR EDT+++ + KR+F S NDNP+ CI SKV +A++P PKI +
Sbjct: 113 PYCRFRWYYRPEDTLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRI 172
Query: 141 KSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGP 200
+ IP D+Y+DM+Y V Y F + G + ++ + + FEN+
Sbjct: 173 EQRVIPPCDYYYDMKYEVPYLNFTSADDGSDA-------SSSLSSDSALNCFENL----- 220
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNE 260
HK E LLDLYSGCG MSTG C+GA +S L+T+W++D +K AC+SLKLNHPE +VRNE
Sbjct: 221 HKDEKFLLDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNE 280
Query: 261 AAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGN 320
AAEDFL L+KEW++LC++F+ +V S+S+ + I S +
Sbjct: 281 AAEDFLALLKEWKRLCEKFS--LVSSTEPVESISELEDEEVEENDDIDEASTGA------ 332
Query: 321 SVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKV 380
++ PGE+EV + + I +GDP +G++ L V
Sbjct: 333 ----------------------------ELEPGEFEVEKFLGIMFGDPQGTGEKTLQLMV 364
Query: 381 HWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYN 440
WKGY++S D+WEP GL NC E++KE+V +GFKS +LPLPG V +CGGPPCQGISGYN
Sbjct: 365 RWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGTVYTVCGGPPCQGISGYN 424
Query: 441 RFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMK 500
R+RN ++PL+D++N+Q+++F+DI++FLKP YVLMENVVD+L+F K L R+A++ V M
Sbjct: 425 RYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMN 484
Query: 501 YQARFGIIAAGCYGLPQFRLR 521
YQ R G++AAG YGLPQ R R
Sbjct: 485 YQTRLGMMAAGSYGLPQLRNR 505
>gi|2865420|gb|AAC02662.1| chromomethylase [Arabidopsis thaliana]
Length = 754
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/501 (42%), Positives = 308/501 (61%), Gaps = 54/501 (10%)
Query: 25 GAYSDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIKG-EGTQKHIGKILEFFKTTDGE 83
G +D+E I+ +CH+ +A + + +L D Y+ G G K I K++E F+ DG
Sbjct: 55 GGKKEDEE--IIKQAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGV 112
Query: 84 EYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIP-PKIG--L 140
Y R +W+YR EDT+++ + KR+F S NDNP+ CI SKV +A++P PKI +
Sbjct: 113 PYCRFRWYYRPEDTLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRI 172
Query: 141 KSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGP 200
+ IP D+Y+DM+Y V Y F + G + ++ + + FEN+
Sbjct: 173 EQRVIPPCDYYYDMKYEVPYLNFTSADDGSDA-------SSSLSSDSALNCFENL----- 220
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNE 260
HK E LLDLYSGCG MSTG C+GA +S L+T+W++D +K AC+SLKLNHPE +VRNE
Sbjct: 221 HKDEKFLLDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNE 280
Query: 261 AAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGN 320
AAEDFL L+KEW++LC++F+ +V S+S+ + I S +
Sbjct: 281 AAEDFLALLKEWKRLCEKFS--LVSSTEPVESISELEDEEVEENDDIDEASTGA------ 332
Query: 321 SVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKV 380
++ PGE+EV + + I +GDP +G++ L V
Sbjct: 333 ----------------------------ELEPGEFEVEKFLGIMFGDPQGTGEKTLQLMV 364
Query: 381 HWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYN 440
WKGY++S D+WEP GL NC E++KE+V +GFKS +LPLPG V +CGGPPCQGISGYN
Sbjct: 365 RWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGTVYTVCGGPPCQGISGYN 424
Query: 441 RFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMK 500
R+RN ++PL+D++N+Q+++F+DI++FLKP YVLMENVVD+L+F K L R+A++ V M
Sbjct: 425 RYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMN 484
Query: 501 YQARFGIIAAGCYGLPQFRLR 521
YQ R G++AAG YGLPQ R R
Sbjct: 485 YQTRLGMMAAGSYGLPQLRNR 505
>gi|18412893|ref|NP_565245.1| putative DNA (cytosine-5)-methyltransferase CMT1 [Arabidopsis
thaliana]
gi|110832797|sp|O49139.2|CMT1_ARATH RecName: Full=Putative DNA (cytosine-5)-methyltransferase CMT1;
AltName: Full=Chromomethylase 1; AltName: Full=Protein
CHROMOMETHYLASE 1
gi|6503286|gb|AAF14662.1|AC011713_10 Identical to gb|AF039367 ecotype Col-0 chromomethylase (CMT1) gene
from Arabidopsis thaliana [Arabidopsis thaliana]
gi|2865416|gb|AAC02660.1| chromomethylase [Arabidopsis thaliana]
gi|332198321|gb|AEE36442.1| putative DNA (cytosine-5)-methyltransferase CMT1 [Arabidopsis
thaliana]
Length = 791
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/501 (42%), Positives = 308/501 (61%), Gaps = 54/501 (10%)
Query: 25 GAYSDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIKG-EGTQKHIGKILEFFKTTDGE 83
G +D+E I+ +CH+ +A + + +L D Y+ G G K I K++E F+ DG
Sbjct: 55 GGKKEDEE--IIKQAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGV 112
Query: 84 EYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIP-PKIG--L 140
Y R +W+YR EDT+++ + KR+F S NDNP+ CI SKV +A++P PKI +
Sbjct: 113 PYCRFRWYYRPEDTLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRI 172
Query: 141 KSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGP 200
+ IP D+Y+DM+Y V Y F + G + ++ + + FEN+
Sbjct: 173 EQRVIPPCDYYYDMKYEVPYLNFTSADDGSDA-------SSSLSSDSALNCFENL----- 220
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNE 260
HK E LLDLYSGCG MSTG C+GA +S L+T+W++D +K AC+SLKLNHPE +VRNE
Sbjct: 221 HKDEKFLLDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNE 280
Query: 261 AAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGN 320
AAEDFL L+KEW++LC++F+ +V S+S+ + I S +
Sbjct: 281 AAEDFLALLKEWKRLCEKFS--LVSSTEPVESISELEDEEVEENDDIDEASTGA------ 332
Query: 321 SVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKV 380
++ PGE+EV + + I +GDP +G++ L V
Sbjct: 333 ----------------------------ELEPGEFEVEKFLGIMFGDPQGTGEKTLQLMV 364
Query: 381 HWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYN 440
WKGY++S D+WEP GL NC E++KE+V +GFKS +LPLPG V +CGGPPCQGISGYN
Sbjct: 365 RWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGTVYTVCGGPPCQGISGYN 424
Query: 441 RFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMK 500
R+RN ++PL+D++N+Q+++F+DI++FLKP YVLMENVVD+L+F K L R+A++ V M
Sbjct: 425 RYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMN 484
Query: 501 YQARFGIIAAGCYGLPQFRLR 521
YQ R G++AAG YGLPQ R R
Sbjct: 485 YQTRLGMMAAGSYGLPQLRNR 505
>gi|2865422|gb|AAC02663.1| chromomethylase [Arabidopsis thaliana]
Length = 791
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/501 (42%), Positives = 308/501 (61%), Gaps = 54/501 (10%)
Query: 25 GAYSDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIKG-EGTQKHIGKILEFFKTTDGE 83
G +D+E I+ +CH+ +A + + +L D Y+ G G K I K++E F+ DG
Sbjct: 55 GGKKEDEE--IIKQAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGV 112
Query: 84 EYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIP-PKIG--L 140
Y R +W+YR EDT+++ + KR+F S NDNP+ CI SKV +A++P PKI +
Sbjct: 113 PYCRFRWYYRPEDTLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRI 172
Query: 141 KSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGP 200
+ IP D+Y+DM+Y V Y F + G + ++ + + FEN+
Sbjct: 173 EQRVIPPCDYYYDMKYEVPYLNFTSADDGSDA-------SSSLSSDSALNCFENL----- 220
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNE 260
HK E LLDLYSGCG MSTG C+GA +S L+T+W++D +K AC+SLKLNHPE +VRNE
Sbjct: 221 HKDEKFLLDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNE 280
Query: 261 AAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGN 320
AAEDFL L+KEW++LC++F+ +V S+S+ + I S +
Sbjct: 281 AAEDFLALLKEWKRLCEKFS--LVSSTEPVESISELEDEEVEENDDIDEASTGA------ 332
Query: 321 SVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKV 380
++ PGE+EV + + I +GDP +G++ L V
Sbjct: 333 ----------------------------ELEPGEFEVEKFLGIMFGDPQGTGEKTLQLMV 364
Query: 381 HWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYN 440
WKGY++S D+WEP GL NC E++KE+V +GFKS +LPLPG V +CGGPPCQGISGYN
Sbjct: 365 RWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGTVYTVCGGPPCQGISGYN 424
Query: 441 RFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMK 500
R+RN ++PL+D++N+Q+++F+DI++FLKP YVLMENVVD+L+F K L R+A++ V M
Sbjct: 425 RYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMN 484
Query: 501 YQARFGIIAAGCYGLPQFRLR 521
YQ R G++AAG YGLPQ R R
Sbjct: 485 YQTRLGMMAAGSYGLPQLRNR 505
>gi|2865433|gb|AAC02670.1| chromomethylase [Arabidopsis suecica]
Length = 754
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/501 (42%), Positives = 308/501 (61%), Gaps = 54/501 (10%)
Query: 25 GAYSDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIKG-EGTQKHIGKILEFFKTTDGE 83
G +D+E I+ +CH+ +A + + +L D Y+ G G K I K++E F+ DG
Sbjct: 55 GGKKEDEE--IIKQAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGV 112
Query: 84 EYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIP-PKIG--L 140
Y R +W+YR EDT+++ + KR+F S NDNP+ CI SKV +A++P PKI +
Sbjct: 113 PYCRFRWYYRPEDTLIERFSHLVQPKRVFLSNDENDNPLTCIWSKVNIAKVPLPKITSRI 172
Query: 141 KSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGP 200
+ IP D+Y+DM+Y V Y F + G + ++ + + FEN+
Sbjct: 173 EQRVIPPCDYYYDMKYEVPYLNFTSADDGSDA-------SSSLSSDSALNCFENL----- 220
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNE 260
HK E LLDLYSGCG MSTG C+GA +S L+T+W++D +K AC+SLKLNHPE +VRNE
Sbjct: 221 HKDEKFLLDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPETEVRNE 280
Query: 261 AAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGN 320
AAEDFL L+KEW++LC++F+ +V S+S+ + I S +
Sbjct: 281 AAEDFLALLKEWKRLCEKFS--LVSSTEPVESISELEDEEVEENDDIDEASTGA------ 332
Query: 321 SVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKV 380
++ PGE+EV + + I +GDP +G++ L V
Sbjct: 333 ----------------------------ELEPGEFEVEKFLGIMFGDPQGTGEKTLQLMV 364
Query: 381 HWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYN 440
WKGY++S D+WEP GL NC E++KE+V +GFKS +LPLPG V +CGGPPCQGISGYN
Sbjct: 365 RWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLPGIVYTVCGGPPCQGISGYN 424
Query: 441 RFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMK 500
R+RN ++PL+D++N+Q+++F+DI++FLKP YVLMENVVD+L+F K L R+A++ V M
Sbjct: 425 RYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARHAVASFVAMN 484
Query: 501 YQARFGIIAAGCYGLPQFRLR 521
YQ R G++AAG YGLPQ R R
Sbjct: 485 YQTRLGMMAAGSYGLPQLRNR 505
>gi|162460714|ref|NP_001105167.1| DNA (cytosine-5)-methyltransferase 3 [Zea mays]
gi|75167623|sp|Q9ARI6.1|CMT2_MAIZE RecName: Full=DNA (cytosine-5)-methyltransferase 2; AltName:
Full=Chromomethylase 2; AltName: Full=DNA cytosine
methyltransferase MET5; AltName: Full=Zea
methyltransferase5; Short=Zmet5
gi|13272199|gb|AAK15805.1| chromomethylase [Zea mays]
Length = 915
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/503 (45%), Positives = 292/503 (58%), Gaps = 73/503 (14%)
Query: 29 DDDEDKIVSNVECHYAQARIGECIFDLGDCAYIK-GEGTQKHIGKILEFFKTTDGEEYFR 87
+DDE K CHY A++ ++ LGD Y+K GE +IG+I EFF+ TD YF
Sbjct: 170 EDDELK----ARCHYRSAKVDNIVYCLGDDVYVKAGENEADYIGRITEFFEGTDRCHYFT 225
Query: 88 VQWFYRAEDTVMKEAADF------HDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLK 141
+WF+RAEDTV+ HD +R+F S NDN +DCIISKV + + P + K
Sbjct: 226 CRWFFRAEDTVINSLVSINVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPNMDPK 285
Query: 142 SNS--IPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHG 199
+ + I D Y+DM Y V YSTF I + S +ET ++ ++
Sbjct: 286 AKAQLIEHCDLYYDMSYSVAYSTF-----ANISSENGQSGSETASGISSDDAGLETSSNM 340
Query: 200 PHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRN 259
P + LLDLYSGCGGMSTGLCLGA LS L TRWA+D + AC+SLK NHP+ +VRN
Sbjct: 341 PERT-ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHPQTEVRN 399
Query: 260 EAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTG 319
E A++FL L+KEW LC ++ + Q V N S
Sbjct: 400 EKADEFLALLKEWAVLC-------------EKYVHQDVDSNLAGS--------------- 431
Query: 320 NSVDSPRVTRSSVNSPRVTRNSVNSPRDVD-IPPGEYEVARIVDICYGDPNESGKRGLNF 378
D D + E+ V +++ I Y K+G+ F
Sbjct: 432 -----------------------EDQEDADTLDKDEFVVQKLIGIRYDGTGR--KKGVYF 466
Query: 379 KVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISG 438
KV W+ Y ED+WEPI+ L +CP +I+EFV+ G K KILPLPGDVDVICGGPPCQGISG
Sbjct: 467 KVQWEEYGPEEDTWEPIDNLSDCPLKIREFVQEGRKRKILPLPGDVDVICGGPPCQGISG 526
Query: 439 YNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVH 498
+NRFRN D PL DE+N+Q+V FMDIV +LKPKYVLMENVVDILKF LG+YALS LV
Sbjct: 527 FNRFRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKFADGYLGKYALSCLVA 586
Query: 499 MKYQARFGIIAAGCYGLPQFRLR 521
MKYQAR G++ AGCYGLPQFR+R
Sbjct: 587 MKYQARLGMMVAGCYGLPQFRMR 609
>gi|409107272|pdb|4FSX|A Chain A, Crystal Structure Of Se-Substituted Zea Mays Zmet2 In
Complex With Sah
gi|409107273|pdb|4FSX|B Chain B, Crystal Structure Of Se-Substituted Zea Mays Zmet2 In
Complex With Sah
Length = 784
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/506 (45%), Positives = 293/506 (57%), Gaps = 69/506 (13%)
Query: 25 GAYSDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIK-GEGTQKHIGKILEFFKTTDGE 83
A D+E+++ CHY A++ ++ LGD Y+K GE +IG+I EFF+ TD
Sbjct: 32 AAKKPDEEEEL--KARCHYRSAKVDNVVYCLGDDVYVKAGENEADYIGRITEFFEGTDQC 89
Query: 84 EYFRVQWFYRAEDTVMKEAADF------HDRKRLFYSTVMNDNPVDCIISKVIVAQIPPK 137
YF +WF+RAEDTV+ HD +R+F S NDN +DCIISKV + + P
Sbjct: 90 HYFTCRWFFRAEDTVINSLVSISVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVDPN 149
Query: 138 IGLKSNS--IPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENM 195
K+ + I S D Y+D Y V YSTF I + S ++T ++
Sbjct: 150 XDPKAKAQLIESCDLYYDXSYSVAYSTF-----ANISSENGQSGSDTASGISSDDVDLET 204
Query: 196 PNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEA 255
+ P + LLDLYSGCGG STGLCLGA LS L TRWA+D + AC+SLK NHP+
Sbjct: 205 SSSXPTRT-ATLLDLYSGCGGXSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQT 263
Query: 256 QVRNEAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSP 315
+VRNE A++FL L+KEW LCK++ Q V N +S + D
Sbjct: 264 EVRNEKADEFLALLKEWAVLCKKYV--------------QDVDSNLASS----EDQADE- 304
Query: 316 KVTGNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRG 375
+SP D D E+ V ++V ICYG + + G
Sbjct: 305 ---------------------------DSPLDKD----EFVVEKLVGICYGGSDR--ENG 331
Query: 376 LNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQG 435
+ FKV W+GY ED+WEPI+ L +CP++I+EFV+ G K KILPLPGDVDVICGGPPCQG
Sbjct: 332 IYFKVQWEGYGPEEDTWEPIDNLSDCPQKIREFVQEGHKRKILPLPGDVDVICGGPPCQG 391
Query: 436 ISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSR 495
ISG+NR+RN D PL DE+N+Q V F DIV +LKPKYVL ENVVDILKF LG+YALS
Sbjct: 392 ISGFNRYRNRDEPLKDEKNKQXVTFXDIVAYLKPKYVLXENVVDILKFADGYLGKYALSC 451
Query: 496 LVHMKYQARFGIIAAGCYGLPQFRLR 521
LV KYQAR G AGCYGLPQFR R
Sbjct: 452 LVAXKYQARLGXXVAGCYGLPQFRXR 477
>gi|357141720|ref|XP_003572323.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3-like [Brachypodium
distachyon]
Length = 897
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/491 (46%), Positives = 282/491 (57%), Gaps = 75/491 (15%)
Query: 41 CHYAQARIGECIFDLGDCAYIKG-EGTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTVM 99
CHY A + ++ LGD Y+K E +IG+I EFF+ TD YF +WF+R EDTV+
Sbjct: 166 CHYRSANVDGTVYALGDDVYVKAAENEADYIGRITEFFEGTDRHCYFACRWFFRPEDTVI 225
Query: 100 KEAA----DFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSD----FY 151
A HD KR+F S NDN +DCII KV + + P + + + +D Y
Sbjct: 226 STAKFVDDHTHDPKRVFLSEETNDNVLDCIIKKVKIIHVDPNMDPEGKAQLVADSEAELY 285
Query: 152 FDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLY 211
+DM Y V YSTF ++PS T ++ E P ALLDLY
Sbjct: 286 YDMSYAVAYSTF----------ANIPSDTNENSGISSDADLEA---GTPPVRTAALLDLY 332
Query: 212 SGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKE 271
SGCGGMSTGLCLGA L+ L TRWA+D + AC+SLK NHP +VRNE AE+FL L+KE
Sbjct: 333 SGCGGMSTGLCLGAALAGLKLETRWAVDLNSFACKSLKYNHPGTEVRNEKAEEFLALLKE 392
Query: 272 WQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPRVTRSS 331
W LC + V S
Sbjct: 393 WAILCDTYV---------------------------------------------HVNNSE 407
Query: 332 VNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGK-RGLNFKVHWKGYSTSED 390
+SP + P D E+ V ++++ICYG SG+ +G+ FKV WKGY ED
Sbjct: 408 SDSPIEDEEEDDEPLAKD----EFVVEKLLEICYGG---SGRGKGIYFKVQWKGYGPEED 460
Query: 391 SWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLD 450
+WEPI L +C +IKEFV+ G K KILPLPGDVDVICGGPPCQGISG+NRFRN PL
Sbjct: 461 TWEPIGNLSDCQLKIKEFVQEGHKRKILPLPGDVDVICGGPPCQGISGFNRFRNRKEPLK 520
Query: 451 DERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAA 510
DE+N+Q+V FMDIV +LKPK+VLMENVVDILKF LGRYALSRLV + YQAR G++ A
Sbjct: 521 DEKNQQMVTFMDIVSYLKPKFVLMENVVDILKFADGYLGRYALSRLVALNYQARLGMMVA 580
Query: 511 GCYGLPQFRLR 521
GCYGLPQFR+R
Sbjct: 581 GCYGLPQFRMR 591
>gi|297841705|ref|XP_002888734.1| chromomethylase CMT3 [Arabidopsis lyrata subsp. lyrata]
gi|297334575|gb|EFH64993.1| chromomethylase CMT3 [Arabidopsis lyrata subsp. lyrata]
Length = 838
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/505 (44%), Positives = 297/505 (58%), Gaps = 54/505 (10%)
Query: 29 DDDEDKIVSNVECHYAQARIGE-CIFDLGDCAYIK-GEGTQKHIGKILEFFKTTDGEEYF 86
DD++DKI+ CHY +A + E I++L D AY++ GEG Q + KI+E F+ +G+ YF
Sbjct: 86 DDEKDKII-RARCHYRRAIVDERQIYELNDDAYVQAGEGNQPFVCKIVEMFEGANGKLYF 144
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNS-- 144
+WFYRA+DTVMK+ D KR+F+S + + N + + K+ + IP L N+
Sbjct: 145 TARWFYRADDTVMKQFKILIDDKRVFFSEIRDTNELGLLEKKLNILMIP----LNENAAG 200
Query: 145 ----IPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSC--TETVPTTATSTFFENMPNH 198
+ D+Y DM Y + Y TF L +S S ++T + EN
Sbjct: 201 PIAATKTCDYYCDMNYLLPYDTFEALQQDTKMAISESSTISSDTDVNEGAAAISENQEGS 260
Query: 199 GPHKA--ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQ 256
+ E LLDLYSGCG MSTGLC+GA+LS NLVT+WA+D + AC+SL NHPE
Sbjct: 261 QDTRVQRETTLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLGHNHPETH 320
Query: 257 VRNEAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPK 316
VRN +AEDFL L+KEW+KLC F++ RNS NS N
Sbjct: 321 VRNMSAEDFLFLLKEWEKLCIHFSL-----------------RNSPNSEEY-ENLHGMTN 362
Query: 317 VTGNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGL 376
V N S + V +IV I +G P + KRGL
Sbjct: 363 VEDNEDVSEESDDEDDGE-------------------VFTVEKIVGISFGVPKKLQKRGL 403
Query: 377 NFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGI 436
KV W Y S D+WEPIEGL NC E+IKEFV+ G++S ILPLPG VDV+CGGPPCQGI
Sbjct: 404 YLKVRWLNYDDSHDTWEPIEGLSNCREKIKEFVKLGYESGILPLPGGVDVVCGGPPCQGI 463
Query: 437 SGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRL 496
SG+NRFRN+ PL DE+N+Q++++M+IVEFLKPKYVLMENVVD+LK + L RYA+ RL
Sbjct: 464 SGHNRFRNLLEPLKDEKNKQLLVYMNIVEFLKPKYVLMENVVDMLKMSEGYLARYAVGRL 523
Query: 497 VHMKYQARFGIIAAGCYGLPQFRLR 521
+ M YQ R G++AAG YGL QFRLR
Sbjct: 524 IQMNYQVRMGMMAAGAYGLAQFRLR 548
>gi|222630668|gb|EEE62800.1| hypothetical protein OsJ_17603 [Oryza sativa Japonica Group]
Length = 1190
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 230/520 (44%), Positives = 293/520 (56%), Gaps = 110/520 (21%)
Query: 64 EGTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVD 123
EG +IG++LEFF+T GE YFRVQWF+ AEDTV+ E A HD +RLFYS + +DN +D
Sbjct: 429 EGKPNYIGRLLEFFETKTGECYFRVQWFFTAEDTVIGEQAQSHDPRRLFYSDLTDDNLLD 488
Query: 124 CIISKVIVAQIPPKIGLKSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETV 183
CI+SKV + Q+PP + KS S+PSSD+Y+DM+Y ++YSTF T+ DL + SC +
Sbjct: 489 CIVSKVTIVQVPPSVDGKSKSVPSSDYYYDMKYSIDYSTFSTIEMEDTDDL-MQSCYTSR 547
Query: 184 PTTATSTFFENMPNHGP--HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSD 241
N + P K EL+LLDLY GCGGMSTGLCLGA+ NL RWA+D D
Sbjct: 548 INDKMKKIDVNKKHKSPVLEKMELSLLDLYCGCGGMSTGLCLGARGGGVNLSARWAIDDD 607
Query: 242 KSACESLKLNHPEAQVRNEAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNS 301
+ ACES + NHPE +VRNE +DFLEL+KEW+KLCK + +
Sbjct: 608 EIACESFRNNHPETRVRNETTDDFLELLKEWEKLCKTYVKH------------------- 648
Query: 302 VNSPSITRNSVDSPKVTGNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIV 361
S T+ VDS T ++ +P +PP E+EV ++V
Sbjct: 649 ----SRTKACVDS----------------------TTESNNETPDCSTVPPEEFEVWKLV 682
Query: 362 DICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLP 421
DIC+GDPN+ K GL FKV WKGY D+WEP+EGLRNC E I++FV G + +ILP P
Sbjct: 683 DICFGDPNKVSKHGLYFKVRWKGYGPHHDTWEPVEGLRNCKEAIRDFVIEGHRQRILPRP 742
Query: 422 GDVDVICGGP------PCQG------------ISGYNR--------------FRNVDSPL 449
V GP P +G I G+ + R PL
Sbjct: 743 --VRWKGYGPHHDTWEPVEGLRNCKEAIRDFVIEGHRQRILPRPRRNIAVFLLRPSKFPL 800
Query: 450 DD----------------ERNRQ------------IVIFMDIVEFLKPKYVLMENVVDIL 481
D RNR+ I++FMD+V+FLKPKYV MENV+DIL
Sbjct: 801 GDVDVVCGGPPCQGISGYNRNREFEAPFKCEKNKQIIVFMDVVQFLKPKYVYMENVLDIL 860
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
KF A+L RYALSRLV M YQAR GI+AAGCYGLPQFR+R
Sbjct: 861 KFADATLARYALSRLVAMHYQARLGIMAAGCYGLPQFRMR 900
>gi|2766715|gb|AAB95486.1| chromomethylase [Arabidopsis arenosa]
gi|2865435|gb|AAC02671.1| chromomethylase [Arabidopsis arenosa]
Length = 744
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/503 (42%), Positives = 306/503 (60%), Gaps = 53/503 (10%)
Query: 23 LHGAYSDDDEDKIVSNVECHYAQARIGECIFDLGDCAYI-KGEGTQKHIGKILEFFKTTD 81
L A D ++KI + HY QA + + +L D Y+ G IGK++E F+ D
Sbjct: 36 LEAATKGDKKEKI-KLAKRHYEQALVDGVLINLNDDVYVTHATGKLNFIGKVIEMFEADD 94
Query: 82 GEEYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIP-PKIG- 139
G Y R++WFYR +DT+++ A+ +KR+F S V +DNP+ CI SKV +A++P PKI
Sbjct: 95 GVPYCRIRWFYRPDDTLIERFAELVQKKRVFLSNVEDDNPLTCIYSKVNIAKVPLPKITS 154
Query: 140 -LKSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNH 198
++ IP D+Y+DM+Y V Y + + + T+ + + S FE +
Sbjct: 155 RIEQRVIPPCDYYYDMKYEVPYLNLTSADDDS-------AASSTLSSDSASNCFETL--- 204
Query: 199 GPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVR 258
HK E LLDLYSGCG MSTG C+GA ++ L+T+W++D +K AC+S + NHPE +VR
Sbjct: 205 --HKDEKFLLDLYSGCGAMSTGFCMGASIAGVKLITKWSVDINKFACDSFRHNHPETEVR 262
Query: 259 NEAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVT 318
NEAAEDFL L+KEW++LC+RF+ ++ S+S+ S + I S D
Sbjct: 263 NEAAEDFLILLKEWKRLCERFS--LISSTEPMESISELEDEESDENDDIDEASTD----- 315
Query: 319 GNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNF 378
+++ GE+EV + V I +GDP +G++ L+
Sbjct: 316 -----------------------------MELSAGEFEVEKFVGIVFGDPKGTGEKTLHL 346
Query: 379 KVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISG 438
KV WKGYS D+WEP GL NC E++KE+V +GFKS +LPLPG V +CGGPPCQGISG
Sbjct: 347 KVRWKGYSPKYDTWEPYSGLGNCKEKLKEYVTDGFKSHLLPLPGTVYSVCGGPPCQGISG 406
Query: 439 YNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVH 498
YNRFRN +PL+D++N+Q+++F+DI++FLKP YVLMENVVD+L+F K L R+A++ V
Sbjct: 407 YNRFRNKQAPLEDKKNQQLLVFLDIIDFLKPSYVLMENVVDLLRFSKGYLARHAVASFVA 466
Query: 499 MKYQARFGIIAAGCYGLPQFRLR 521
M YQ R G++ AG YGLPQ R R
Sbjct: 467 MNYQTRLGMMTAGSYGLPQVRNR 489
>gi|110739012|dbj|BAF01425.1| putative chromomethylase [Arabidopsis thaliana]
Length = 839
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 225/506 (44%), Positives = 303/506 (59%), Gaps = 53/506 (10%)
Query: 28 SDDDEDKIVSNVECHYAQARIGE-CIFDLGDCAYIK-GEGTQKHIGKILEFFKTTDGEEY 85
+ DDE + CHY +A +GE I++L D AY++ GEG I KI+E F+ +G+ Y
Sbjct: 84 TKDDEKVEIIRARCHYRRAIVGERQIYELNDDAYVQSGEGKDPFICKIIEMFEGANGKLY 143
Query: 86 FRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSI 145
F +WFYR DTVMKE +KR+F+S + + N + + K+ + IP K +I
Sbjct: 144 FTARWFYRPSDTVMKEFEILIKKKRVFFSEIQDTNELGLLEKKLNILMIPLNENTKE-TI 202
Query: 146 PSS---DFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVP-----TTATSTFFENMPN 197
P++ DF+ DM Y + Y TF + + +S S + A S E
Sbjct: 203 PATENCDFFCDMNYFLPYDTFEAIQQETMMAISESSTISSDTDIREGAAAISEIGECSQE 262
Query: 198 HGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
HK + LLDLYSGCG MSTGLC+GA+LS NLVT+WA+D + AC+SL+ NHPE V
Sbjct: 263 TEGHK-KATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHPETNV 321
Query: 258 RNEAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKV 317
RN AEDFL L+KEW+KLC F++ NSP NS + +
Sbjct: 322 RNMTAEDFLFLLKEWEKLCIHFSLR--------------------NSP----NSEEYANL 357
Query: 318 TG--NSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRG 375
G N D+ V+ S N D ++ + V +IV I +G P + KRG
Sbjct: 358 HGLNNVEDNEDVSEESENE-----------DDGEV----FTVDKIVGISFGVPKKLLKRG 402
Query: 376 LNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQG 435
L KV W Y S D+WEPIEGL NC +I+EFV+ G+KS ILPLPG VDV+CGGPPCQG
Sbjct: 403 LYLKVRWLNYDDSHDTWEPIEGLSNCRGKIEEFVKLGYKSGILPLPGGVDVVCGGPPCQG 462
Query: 436 ISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSR 495
ISG+NRFRN+ PL+D++N+Q++++M+IVE+LKPK+VLMENVVD+LK K L R+A+ R
Sbjct: 463 ISGHNRFRNLLDPLEDQKNKQLLVYMNIVEYLKPKFVLMENVVDMLKMAKGYLARFAVGR 522
Query: 496 LVHMKYQARFGIIAAGCYGLPQFRLR 521
L+ M YQ R G++AAG YGL QFRLR
Sbjct: 523 LLQMNYQVRNGMMAAGAYGLAQFRLR 548
>gi|14647157|gb|AAK71870.1| chromomethylase 3 [Arabidopsis thaliana]
Length = 839
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/505 (43%), Positives = 302/505 (59%), Gaps = 51/505 (10%)
Query: 28 SDDDEDKIVSNVECHYAQARIGE-CIFDLGDCAYIK-GEGTQKHIGKILEFFKTTDGEEY 85
+ DDE + CHY +A + E I++L D AY++ GEG I KI+E F+ +G+ Y
Sbjct: 84 TKDDEKVEIIRARCHYRRAIVDERQIYELNDDAYVQSGEGKDPFICKIIEMFEGVNGKLY 143
Query: 86 FRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSI 145
F +WFYR DTVMKE ++KR+F+S + + N + + K+ + IP K +I
Sbjct: 144 FTARWFYRPSDTVMKEFEILINKKRVFFSEIQDTNELGLLEKKLNILMIPLNENTKE-TI 202
Query: 146 PSS---DFYFDMEYCVEYSTFRTLLTGKIHDLS----LPSCTETVPTTATSTFFENMPNH 198
P++ DF+ DM Y + Y TF + + +S + S T+ A +
Sbjct: 203 PATENCDFFCDMNYFLPYDTFEAIQQETMMAISESSTISSDTDIREGAAAISEIGECSQE 262
Query: 199 GPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVR 258
+ E LLDLYSGCG MSTGLC+GA+LS NLVT+WA+D + AC+SL+ NHPE VR
Sbjct: 263 TEGQKEATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHPETNVR 322
Query: 259 NEAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVT 318
N AEDFL L+KEW+KLC F++ NSP NS + +
Sbjct: 323 NMTAEDFLFLLKEWEKLCIHFSLR--------------------NSP----NSEEYANLH 358
Query: 319 G--NSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGL 376
G N D+ V+ S N D ++ + V +IV I +G P + KRGL
Sbjct: 359 GLNNVEDNEDVSEESENE-----------DDGEV----FTVDKIVGISFGVPKKLLKRGL 403
Query: 377 NFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGI 436
KV W Y S D+WEPIEGL NC +I EFV+ G+KS ILPLPG VDV+CGGPPCQGI
Sbjct: 404 YLKVRWLNYDDSHDTWEPIEGLSNCRGKIGEFVKLGYKSGILPLPGGVDVVCGGPPCQGI 463
Query: 437 SGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRL 496
SG+NRFRN+ PL+D++N+Q++++M+IVE+LKPK+VLMENVVD+LK K L R+A+ RL
Sbjct: 464 SGHNRFRNLLDPLEDQKNKQLLVYMNIVEYLKPKFVLMENVVDMLKMAKGYLARFAVGRL 523
Query: 497 VHMKYQARFGIIAAGCYGLPQFRLR 521
+ M YQ R G++AAG YGL QFRLR
Sbjct: 524 LQMNYQVRNGMMAAGAYGLAQFRLR 548
>gi|302818367|ref|XP_002990857.1| hypothetical protein SELMODRAFT_132507 [Selaginella moellendorffii]
gi|300141418|gb|EFJ08130.1| hypothetical protein SELMODRAFT_132507 [Selaginella moellendorffii]
Length = 933
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/501 (43%), Positives = 299/501 (59%), Gaps = 61/501 (12%)
Query: 42 HYAQARIGECIFDLGDCAYIKGEGTQ-KHIGKILEFFKTTDGEEYFRVQWFYRAEDTV-- 98
HY +A + + +GDC ++ +G +++GK+LEFFKT + E +FRVQWF+R DTV
Sbjct: 190 HYEEAVVDGKHYKVGDCVALELQGDDAEYLGKVLEFFKTANQENWFRVQWFFRFSDTVCL 249
Query: 99 --------------MKEAADFH-DRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSN 143
+ + D H D KR+F S +DN ++CII KV V+ P
Sbjct: 250 RLCGYPDCKCSLQAIGDLDDVHLDNKRVFLSDDEDDNMIECIIKKVKVSYAPVMDAFSKK 309
Query: 144 SIPSS-DFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPT--TATSTFFENMPNHGP 200
I S D+YFDM Y ++STF + +G + S + + + TA + + +
Sbjct: 310 KIKQSCDYYFDMGYTGDFSTFYKVPSGNVFVFSTDALEDASSSFQTAVTRCSDTI----- 364
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNE 260
K EL LLDLY GCG MSTGL +GA L NLVT+WA+D ++ AC S+K NHPE +VRNE
Sbjct: 365 -KPELILLDLYCGCGAMSTGLSMGAALGGVNLVTKWAVDYNEHACNSMKYNHPETEVRNE 423
Query: 261 AAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGN 320
AE FL L+KEWQKLC ++ ++ + ++ N+ S N++ + + +
Sbjct: 424 DAECFLLLLKEWQKLCTKYEGHVAD--------------DNSNASSPDSNTLGADEYAAD 469
Query: 321 SVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKV 380
+ +V VDI + + D P + KR L FKV
Sbjct: 470 EYEVQQV--------------------VDIRMAGIQKPKKPDTSSKMPEKPIKRRLEFKV 509
Query: 381 HWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYN 440
WKGY++ D+WEP++ L +C ERI++FV G + +ILPLPGDVD++CGGPPCQG SGYN
Sbjct: 510 RWKGYTSDHDTWEPVDHLDSCQERIRDFVLEGRRRRILPLPGDVDMVCGGPPCQGASGYN 569
Query: 441 RFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMK 500
RFRN ++PL RNRQ+VIFMDIV FL+PK+VLMENVVDILKF + LGRYA+ RLV M+
Sbjct: 570 RFRNTEAPLTCPRNRQMVIFMDIVGFLRPKFVLMENVVDILKFQQGLLGRYAMFRLVDMR 629
Query: 501 YQARFGIIAAGCYGLPQFRLR 521
YQA+ G++AAG YGLPQFR+R
Sbjct: 630 YQAKLGMMAAGSYGLPQFRMR 650
>gi|15222449|ref|NP_177135.1| DNA (cytosine-5)-methyltransferase CMT3 [Arabidopsis thaliana]
gi|110832800|sp|Q94F88.2|CMT3_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase CMT3; AltName:
Full=Chromomethylase 3; AltName: Full=Protein
CHROMOMETHYLASE 3
gi|12325192|gb|AAG52543.1|AC013289_10 putative chromomethylase; 17383-22406 [Arabidopsis thaliana]
gi|332196852|gb|AEE34973.1| DNA (cytosine-5)-methyltransferase CMT3 [Arabidopsis thaliana]
Length = 839
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/506 (44%), Positives = 302/506 (59%), Gaps = 53/506 (10%)
Query: 28 SDDDEDKIVSNVECHYAQARIGE-CIFDLGDCAYIK-GEGTQKHIGKILEFFKTTDGEEY 85
+ DDE + CHY +A + E I++L D AY++ GEG I KI+E F+ +G+ Y
Sbjct: 84 TKDDEKVEIIRARCHYRRAIVDERQIYELNDDAYVQSGEGKDPFICKIIEMFEGANGKLY 143
Query: 86 FRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSI 145
F +WFYR DTVMKE +KR+F+S + + N + + K+ + IP K +I
Sbjct: 144 FTARWFYRPSDTVMKEFEILIKKKRVFFSEIQDTNELGLLEKKLNILMIPLNENTKE-TI 202
Query: 146 PSS---DFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVP-----TTATSTFFENMPN 197
P++ DF+ DM Y + Y TF + + +S S + A S E
Sbjct: 203 PATENCDFFCDMNYFLPYDTFEAIQQETMMAISESSTISSDTDIREGAAAISEIGECSQE 262
Query: 198 HGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
HK + LLDLYSGCG MSTGLC+GA+LS NLVT+WA+D + AC+SL+ NHPE V
Sbjct: 263 TEGHK-KATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHPETNV 321
Query: 258 RNEAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKV 317
RN AEDFL L+KEW+KLC F++ NSP NS + +
Sbjct: 322 RNMTAEDFLFLLKEWEKLCIHFSLR--------------------NSP----NSEEYANL 357
Query: 318 TG--NSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRG 375
G N D+ V+ S N D ++ + V +IV I +G P + KRG
Sbjct: 358 HGLNNVEDNEDVSEESENE-----------DDGEV----FTVDKIVGISFGVPKKLLKRG 402
Query: 376 LNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQG 435
L KV W Y S D+WEPIEGL NC +I+EFV+ G+KS ILPLPG VDV+CGGPPCQG
Sbjct: 403 LYLKVRWLNYDDSHDTWEPIEGLSNCRGKIEEFVKLGYKSGILPLPGGVDVVCGGPPCQG 462
Query: 436 ISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSR 495
ISG+NRFRN+ PL+D++N+Q++++M+IVE+LKPK+VLMENVVD+LK K L R+A+ R
Sbjct: 463 ISGHNRFRNLLDPLEDQKNKQLLVYMNIVEYLKPKFVLMENVVDMLKMAKGYLARFAVGR 522
Query: 496 LVHMKYQARFGIIAAGCYGLPQFRLR 521
L+ M YQ R G++AAG YGL QFRLR
Sbjct: 523 LLQMNYQVRNGMMAAGAYGLAQFRLR 548
>gi|14583092|gb|AAK69756.1|AF383170_1 chromomethylase CMT3 [Arabidopsis thaliana]
Length = 839
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/506 (44%), Positives = 301/506 (59%), Gaps = 53/506 (10%)
Query: 28 SDDDEDKIVSNVECHYAQARIGE-CIFDLGDCAYIK-GEGTQKHIGKILEFFKTTDGEEY 85
+ DDE + CHY +A + E I++L D AY++ GEG I KI+E F+ +G+ Y
Sbjct: 84 TKDDEKVEIIRARCHYRRAIVDERQIYELNDDAYVQSGEGKDPFICKIIEMFEGANGKLY 143
Query: 86 FRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSI 145
F +WFYR DTVMKE KR+F+S + + N + + K+ + IP K +I
Sbjct: 144 FTARWFYRPSDTVMKEFEILIKEKRVFFSEIQDTNELGLLEKKLNILMIPLNENTKE-TI 202
Query: 146 PSS---DFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVP-----TTATSTFFENMPN 197
P++ DF+ DM Y + Y TF + + +S S + A S E
Sbjct: 203 PATENCDFFCDMNYFLPYDTFEAIQQETMMAISESSTISSDTDIREGAAAISEIGECSQE 262
Query: 198 HGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
HK + LLDLYSGCG MSTGLC+GA+LS NLVT+WA+D + AC+SL+ NHPE V
Sbjct: 263 TEGHK-KATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHPETNV 321
Query: 258 RNEAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKV 317
RN AEDFL L+KEW+KLC F++ NSP NS + +
Sbjct: 322 RNMTAEDFLFLLKEWEKLCIHFSLR--------------------NSP----NSEEYANL 357
Query: 318 TG--NSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRG 375
G N D+ V+ S N D ++ + V +IV I +G P + KRG
Sbjct: 358 HGLNNVEDNEDVSEESENE-----------DDGEV----FTVDKIVGISFGVPKKLLKRG 402
Query: 376 LNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQG 435
L KV W Y S D+WEPIEGL NC +I+EFV+ G+KS ILPLPG VDV+CGGPPCQG
Sbjct: 403 LYLKVRWLNYDDSHDTWEPIEGLSNCRGKIEEFVKLGYKSGILPLPGGVDVVCGGPPCQG 462
Query: 436 ISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSR 495
ISG+NRFRN+ PL+D++N+Q++++M+IVE+LKPK+VLMENVVD+LK K L R+A+ R
Sbjct: 463 ISGHNRFRNLLDPLEDQKNKQLLVYMNIVEYLKPKFVLMENVVDMLKMAKGYLARFAVGR 522
Query: 496 LVHMKYQARFGIIAAGCYGLPQFRLR 521
L+ M YQ R G++AAG YGL QFRLR
Sbjct: 523 LLQMNYQVRNGMMAAGAYGLAQFRLR 548
>gi|297837287|ref|XP_002886525.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332366|gb|EFH62784.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 732
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/493 (43%), Positives = 290/493 (58%), Gaps = 73/493 (14%)
Query: 42 HYAQARIGECIFDLGDCAYIKGEGTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTVMKE 101
HY +A + ++ L D Y++ +G I KI+E F+ DGE YFR Q FYRAEDTV+++
Sbjct: 21 HYDKALVNGVVYSLNDDIYVQAKGEPNRIAKIIELFEGVDGEGYFRAQLFYRAEDTVIQD 80
Query: 102 AAD--FHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNS--IPSSDFYFDMEYC 157
A +++R+F S V D ++ I+SKV + ++P KI L++ IP+ DF++DM Y
Sbjct: 81 LAGEYLQEKRRVFLSNVEADYSLNLIVSKVHIIKLPAKILLENEERDIPACDFFYDMRYN 140
Query: 158 VEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGM 217
+E+ TF +V ++ + N G E +LDLYSGCG M
Sbjct: 141 LEHLTF-----------------SSVDNEISNVEGNDSNNVGSCNKEKYMLDLYSGCGAM 183
Query: 218 STGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQKLCK 277
STGLC+GA LS NL+T+WA+D++ ACESLKLNHPE + R E+
Sbjct: 184 STGLCMGASLSGVNLITKWAVDNNSFACESLKLNHPETKCRR-----IFEIA-------- 230
Query: 278 RFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPRVTRSSVNSPRV 337
E +++M PKV + P S
Sbjct: 231 ---------EGMEKAM---------------------PKVFTSPKTEPLELDSDFEDDNE 260
Query: 338 TRNSVNSPRD-VDIPPGEYEVARIVDICYGDP---NESGKR----GLNFKVHWKGY-STS 388
+ N+V D ++ P E+EV ++ ICYGDP N S K+ L FKVHWKGY S
Sbjct: 261 SENNVEGESDGYEMSPDEFEVDEVLSICYGDPKKANASVKKVKPSALYFKVHWKGYDSEE 320
Query: 389 EDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSP 448
E++WEP +GLR C E++KEFV GFKSK+LPLPGDV ++CGGPPCQG+SG+NRFRN D P
Sbjct: 321 ENTWEPYDGLRKCKEKVKEFVTKGFKSKLLPLPGDVHIVCGGPPCQGLSGFNRFRNKDKP 380
Query: 449 LDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGII 508
L DE+N Q+ +FMDI+++LKPKYVLMENVV +L F K +GRYA++RLV+ YQAR GI+
Sbjct: 381 LQDEKNNQVTVFMDIIDYLKPKYVLMENVVSLLGFAKGFVGRYAVARLVNKNYQARLGIM 440
Query: 509 AAGCYGLPQFRLR 521
AAG YG+PQ R R
Sbjct: 441 AAGAYGVPQCRYR 453
>gi|302785127|ref|XP_002974335.1| hypothetical protein SELMODRAFT_30570 [Selaginella moellendorffii]
gi|300157933|gb|EFJ24557.1| hypothetical protein SELMODRAFT_30570 [Selaginella moellendorffii]
Length = 773
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/499 (42%), Positives = 294/499 (58%), Gaps = 59/499 (11%)
Query: 42 HYAQARIGECIFDLGDCAYIKGEGTQ-KHIGKILEFFKTTDGEEYFRVQWFYRAEDTV-- 98
HY +A + + +GDC ++ +G +++GK+LEFFKT + E +FRVQWF+R DTV
Sbjct: 39 HYEEAVVDGKHYKVGDCVALELQGDDTEYLGKVLEFFKTANQENWFRVQWFFRFSDTVCL 98
Query: 99 --------------MKEAADFH-DRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSN 143
+ + D H D KR+F S +DN ++CII KV V+ P
Sbjct: 99 RLCVYPDCKCSLQAIGDLDDVHLDNKRVFLSDDEDDNMIECIIKKVKVSYAPVMDAFSKK 158
Query: 144 SIPSS-DFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHK 202
I + D+YFDM Y ++STF + +G + + TA + + + K
Sbjct: 159 KIKQNCDYYFDMGYTGDFSTFYKVPSGNVFVFDALEEASSSFQTAVTRCSDTI------K 212
Query: 203 AELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAA 262
EL LLDLY GCG MSTGL +GA L LVT+WA+D ++ AC S+K NHPE +VRNE A
Sbjct: 213 PELILLDLYCGCGAMSTGLSMGAALGGVKLVTKWAVDYNEHACNSMKYNHPETEVRNEDA 272
Query: 263 EDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSV 322
E FL L+KEWQKLC ++ ++ + ++ N+ S ++ + + +
Sbjct: 273 ECFLLLLKEWQKLCTKYEGHVAD--------------DNSNASSPDSTTLGADEYAADEY 318
Query: 323 DSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKVHW 382
+ +V VDI + + D P + KR L FKV W
Sbjct: 319 EVQQV--------------------VDIRMAGIQKPKKPDTSSKMPEKPIKRRLEFKVRW 358
Query: 383 KGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRF 442
KGY++ D+WEP++ L +C ERI++FV G + +ILPLPGDVD++CGGPPCQG SGYNRF
Sbjct: 359 KGYTSDHDTWEPVDHLDSCQERIRDFVLEGRRRRILPLPGDVDMVCGGPPCQGASGYNRF 418
Query: 443 RNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQ 502
RN ++PL RNRQ+VIFMDIV FL+PK+VLMENVVDILKF + LGRYA+ RLV M+YQ
Sbjct: 419 RNTEAPLTCPRNRQMVIFMDIVGFLRPKFVLMENVVDILKFQQGLLGRYAMFRLVDMRYQ 478
Query: 503 ARFGIIAAGCYGLPQFRLR 521
A+ G++AAG YGLPQFR+R
Sbjct: 479 AKLGMMAAGSYGLPQFRMR 497
>gi|411012961|gb|AFV99137.1| CMT-type cytosine DNA-methyltransferase 3c [Malus x domestica]
Length = 974
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/503 (41%), Positives = 296/503 (58%), Gaps = 74/503 (14%)
Query: 28 SDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIKGEGTQK-HIGKILEFFKTTDGEEYF 86
S+DDED I CHY +A + +DL D A+++GE ++ +I KI+E F+ G YF
Sbjct: 264 SNDDEDII--QARCHYTKALVDGISYDLYDDAHVQGETKEEPYICKIVEMFEAIGGLLYF 321
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIG--LKSNS 144
QW+YR+ DTV+K A R+F+S V +DNP+DC++ K+ + ++ + +KS S
Sbjct: 322 TAQWYYRSRDTVIKHCATVA-CGRVFFSDVRDDNPLDCLVEKLHIVRLTLNVDEDVKSKS 380
Query: 145 IPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAE 204
IP ++Y D +Y + YSTF L T ENM G +
Sbjct: 381 IPVCNYYCDTKYLLPYSTFVNLPT------------------------ENM-QSGSDDST 415
Query: 205 LALLD---LYSGCGG-MSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNE 260
+++ D L S +S G+C ++ RWA+D ++ AC+SL+ NHPE +VRNE
Sbjct: 416 ISVEDDVCLDSEVDSKLSNGVCAKSE--------RWAVDYNEXACKSLEQNHPETEVRNE 467
Query: 261 AAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTR--NSVNSPSITRNSVDSPKVT 318
AAEDFL ++KEW+KLC + +VE +N + + + + + + V+
Sbjct: 468 AAEDFLTMLKEWRKLC--MCLKLVETDNLEEDVEKSMLEFFRKEDDEVEXEGEEEEEDVS 525
Query: 319 GNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNF 378
GN D V +EV +V +C+GDP ++ K+G+ F
Sbjct: 526 GNENDDSEV---------------------------FEVDCVVGVCFGDPKKNEKKGIYF 558
Query: 379 KVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISG 438
K+HWKGY ED+WEP+ L +C + IK F+ G++ K LPLPGDVDV+CGGPPCQG+SG
Sbjct: 559 KIHWKGYGPEEDTWEPMNELEHCKKAIKGFITEGYRLKKLPLPGDVDVVCGGPPCQGVSG 618
Query: 439 YNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVH 498
+NRFRN +SPL DE+N+Q+ ++MDIV +LKPK+VLMENVVDILKF LGRYAL RLV
Sbjct: 619 FNRFRNTESPLADEKNQQLEVYMDIVRYLKPKFVLMENVVDILKFADGFLGRYALGRLVD 678
Query: 499 MKYQARFGIIAAGCYGLPQFRLR 521
M YQAR G++AAG YGLPQFR+R
Sbjct: 679 MNYQARMGMMAAGAYGLPQFRMR 701
>gi|116062018|dbj|BAF34637.1| chromomethylase [Brassica rapa]
Length = 805
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 203/482 (42%), Positives = 277/482 (57%), Gaps = 71/482 (14%)
Query: 42 HYAQARIGECI-FDLGDCAYIKGEGTQK-HIGKILEFFKTTDGEEYFRVQWFYRAEDTVM 99
H+ +A + + I ++L D A+++ E +K I KI E F+ DG+ YF QWFYRA DTV+
Sbjct: 107 HFRRAILDDSITYNLNDDAHVQSEEDEKPFICKIAEIFEGCDGKMYFTAQWFYRACDTVI 166
Query: 100 KEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDFYFDMEYCVE 159
++ + D KR+F S + + N + +++K+ + IP + + S D+Y +M+Y +
Sbjct: 167 QKHEEMIDDKRVFISDIKDVNSMGVLLNKLKILMIP--LTENTEVTESCDYYCNMKYRLP 224
Query: 160 YSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGMST 219
+ST L + + C PN + + +LDLY GCG MST
Sbjct: 225 FSTLEALQSSQ--------CI--------------TPNQ---RTDATMLDLYCGCGAMST 259
Query: 220 GLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQKLCKRF 279
GLC+GA+LS LVT+WA+D+ + A +S+K NHPE VRNE+AEDFL L+KEW+KLC F
Sbjct: 260 GLCMGAQLSGLKLVTKWAVDTCEYAVQSIKYNHPETVVRNESAEDFLYLLKEWEKLCIHF 319
Query: 280 AVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPRVTRSSVNSPRVTR 339
++ E K ++ V S + D +V
Sbjct: 320 SLIESEDSEKYENLYGMSAAEEVKDGSDESDVKDGGEV---------------------- 357
Query: 340 NSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLR 399
+EV +IV I E G R L+ KV W+ Y S D+WEPIE L
Sbjct: 358 ---------------FEVEKIVGI----KKEEGGR-LHLKVRWENYGPSHDTWEPIENLS 397
Query: 400 NCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVI 459
NC ++IKEFV +GFK+ ILPLPG VDV+CGGPPCQGISGYNRFRN PL D++N Q++
Sbjct: 398 NCRKKIKEFVVHGFKTSILPLPGGVDVVCGGPPCQGISGYNRFRNEKEPLKDKKNEQLLE 457
Query: 460 FMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFR 519
+M IVEFLKPKYVLMENVVD+L+F L RYA+ RLV M YQ R G++AAG YGL QFR
Sbjct: 458 YMKIVEFLKPKYVLMENVVDMLRFVDGFLARYAVGRLVQMNYQTRMGMMAAGSYGLAQFR 517
Query: 520 LR 521
R
Sbjct: 518 RR 519
>gi|297842789|ref|XP_002889276.1| hypothetical protein ARALYDRAFT_895912 [Arabidopsis lyrata subsp.
lyrata]
gi|297335117|gb|EFH65535.1| hypothetical protein ARALYDRAFT_895912 [Arabidopsis lyrata subsp.
lyrata]
Length = 876
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 185/500 (37%), Positives = 270/500 (54%), Gaps = 104/500 (20%)
Query: 31 DEDKIVSNVECHYAQARIGECIFDLGDCAYIKG-EGTQKHIGKILEFFKTTDGEEYFRVQ 89
D+ + + + HY QA + + +L D Y+ G G IGK++E F+ DG Y R++
Sbjct: 53 DKKEKIKLAKRHYEQALVDGVLINLNDDVYVTGLPGKLNFIGKVIEMFEADDGVPYSRIR 112
Query: 90 WFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIP-PKIG--LKSNSIP 146
WFYR DT+++ A+ +KR+F S V +DNP+ CI SKV +A++P PKI ++ IP
Sbjct: 113 WFYRPNDTLIERFAELVQKKRVFLSNVEDDNPLTCIYSKVNIAKVPLPKITSRIEQRVIP 172
Query: 147 SSDFYFDMEYCVEYSTFR-----TLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPH 201
D+Y+DM+Y V Y F T + + S +C ET+ H
Sbjct: 173 PCDYYYDMKYEVPYLNFTSADDDTAASSTLSSDSASNCFETL-----------------H 215
Query: 202 KAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEA 261
K E LLDLYSGCG MSTG C+GA ++ L+T+W++D +K AC+S + NHPE +VRNEA
Sbjct: 216 KDEKYLLDLYSGCGAMSTGFCMGASIAGVKLITKWSVDINKFACDSFRHNHPETEVRNEA 275
Query: 262 AEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNS 321
AEDFL L+KEW++LC+RF S++S + S+ + +
Sbjct: 276 AEDFLILLKEWKRLCERF---------------------SLSSSTEPMESISELEDEESD 314
Query: 322 VDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKVH 381
+ S+ +++ GE+EV + V I +GDP +G++ L+ K
Sbjct: 315 ENDDIDEAST---------------GMELSAGEFEVEKFVGIVFGDPKGTGEKTLHLK-- 357
Query: 382 WKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNR 441
G V +CGGPPCQGISGYNR
Sbjct: 358 ----------------------------------------GTVYSVCGGPPCQGISGYNR 377
Query: 442 FRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKY 501
FRN +PL+D++N+Q+++F+DI++FLKP YVLMENVVD+L+F K L R+A++ V M Y
Sbjct: 378 FRNKQAPLEDKKNQQLLVFLDIIDFLKPSYVLMENVVDLLRFSKGYLARHAVASFVAMNY 437
Query: 502 QARFGIIAAGCYGLPQFRLR 521
Q R G++ AG YGLPQ R R
Sbjct: 438 QTRLGMMTAGSYGLPQVRNR 457
>gi|1297185|gb|AAA98912.1| theoretical protein with similarity to Swiss-Prot Accession Number
P34881 DNA (cytosine-5-) methyltransferase [Arabidopsis
thaliana]
Length = 620
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 157/330 (47%), Positives = 216/330 (65%), Gaps = 41/330 (12%)
Query: 192 FENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLN 251
FEN+ HK E LLDLYSGCG MSTG C+GA +S L+T+W++D +K AC+SLKLN
Sbjct: 135 FENL-----HKDEKFLLDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLN 189
Query: 252 HPEAQVRNEAAEDFLELVKEWQKLCKRFAVNIVERENKQRSMSQRVTRNSVNSPSITRNS 311
HPE +VRNEAAEDFL L+KEW++LC++F+ +V S+S+ + I S
Sbjct: 190 HPETEVRNEAAEDFLALLKEWKRLCEKFS--LVSSTEPVESISELEDEEVEENDDIDEAS 247
Query: 312 VDSPKVTGNSVDSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEVARIVDICYGDPNES 371
+ ++ PGE+EV + + I +GDP +
Sbjct: 248 TGA----------------------------------ELEPGEFEVEKFLGIMFGDPQGT 273
Query: 372 GKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGP 431
G++ L V WKGY++S D+WEP GL NC E++KE+V +GFKS +LPL G V +CGGP
Sbjct: 274 GEKTLQLMVRWKGYNSSYDTWEPYSGLGNCKEKLKEYVIDGFKSHLLPLSGTVYTVCGGP 333
Query: 432 PCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRY 491
PCQGISGYNR+RN ++PL+D++N+Q+++F+DI++FLKP YVLMENVVD+L+F K L R+
Sbjct: 334 PCQGISGYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENVVDLLRFSKGFLARH 393
Query: 492 ALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
A++ V M YQ R G++AAG YGLPQ R R
Sbjct: 394 AVASFVAMNYQTRLGMMAAGSYGLPQLRNR 423
>gi|213498014|emb|CAS84142.1| chromomethylase [Nicotiana tomentosiformis]
Length = 500
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/304 (50%), Positives = 196/304 (64%), Gaps = 36/304 (11%)
Query: 219 TGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQKLCKR 278
TGLCLGA + LVT+WA+D ++ AC+SLK NHPE VRNE+A+DFL L++EW++LC
Sbjct: 1 TGLCLGADIGGVKLVTKWAVDLNQYACDSLKWNHPETAVRNESADDFLLLLREWRQLC-- 58
Query: 279 FAVNIVERENKQRSMSQRVTRNSVNSPSITRNSVDSPKVTGNSVDSPRVTRSSVNSPRVT 338
S + RN N+P+ + V ++ + S
Sbjct: 59 --------------ASCSLLRN--NTPTHSFLKVRDEDDKDDNDNEDEDEGSG------- 95
Query: 339 RNSVNSPRDVDIPPGE-YEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEG 397
D GE +EV ++++ICYGDP E K GL FKV WKGY ED+WEPIEG
Sbjct: 96 ----------DDEQGEIFEVEQLLEICYGDPKEKNKPGLYFKVRWKGYGQEEDTWEPIEG 145
Query: 398 LRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQI 457
L C E+IK+FV GFK+ ILPLPG+V VICGGPPCQG+SG+NRFRN +PL D +N+Q+
Sbjct: 146 LDGCQEKIKDFVAKGFKASILPLPGEVQVICGGPPCQGVSGFNRFRNSTNPLGDSKNKQL 205
Query: 458 VIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQ 517
FMDIVEFL P++VLMENVVD++KF LGRYAL RLV M YQAR G++ AG YGLPQ
Sbjct: 206 ETFMDIVEFLNPQFVLMENVVDLVKFADGFLGRYALGRLVGMNYQARMGMMVAGAYGLPQ 265
Query: 518 FRLR 521
FR R
Sbjct: 266 FRRR 269
>gi|449462605|ref|XP_004149031.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Cucumis
sativus]
Length = 855
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 114/163 (69%), Positives = 142/163 (87%)
Query: 359 RIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKIL 418
+I+ ICYGDPNE+ KRGL KV WKGY + ED+WEPI+GL NC E++K+FV +G+KSKIL
Sbjct: 398 KILAICYGDPNETKKRGLFLKVRWKGYGSDEDTWEPIDGLSNCKEKLKDFVTSGYKSKIL 457
Query: 419 PLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVV 478
PLPGDVDVICGGPPCQGISG+NRFRN ++PL+DE+N+Q+V++MD+VE+L+PKYVLMENVV
Sbjct: 458 PLPGDVDVICGGPPCQGISGFNRFRNKENPLEDEKNKQLVVYMDLVEYLRPKYVLMENVV 517
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
DI+KF LGRYAL RL+ M YQ R G++AAG YGLPQFR+R
Sbjct: 518 DIVKFANGFLGRYALGRLISMNYQVRMGMMAAGAYGLPQFRMR 560
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 122/271 (45%), Positives = 176/271 (64%), Gaps = 9/271 (3%)
Query: 28 SDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIKGEGTQK-HIGKILEFFKTTDGEEYF 86
S DD ++++ + HY+QA++ ++L D A++K EG + +I KI+E F+ DG+ YF
Sbjct: 101 SRDDSEEVIQALH-HYSQAKVDNITYNLLDDAHVKAEGEEDDYICKIIEMFEAVDGQLYF 159
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
QW+YRA+DTV+K+ A + KR+F+S V +DNP+DC++ K+ +A+IP + K N +P
Sbjct: 160 TAQWYYRAKDTVVKDHAHLINDKRVFFSEVRDDNPLDCLVKKLNIARIPLTMDEKKNCLP 219
Query: 147 SSDFYFDMEYCVEYSTFRTLLTG--KIHDLSLPSCTETVPTT----ATSTFFENMPNHGP 200
S DFY DM Y + YS+F L T K+ + + + V T S +
Sbjct: 220 SCDFYCDMLYLLPYSSFVKLPTSEKKVGSETSSTISSDVDTNEACEVNSQIGDVTQAQQC 279
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNE 260
K ++ALLDLYSGCG MSTGLCLG LS NLVT+WA+D ++ ACESL+ NHPE QVRNE
Sbjct: 280 CKPDVALLDLYSGCGAMSTGLCLGGNLSGVNLVTKWAVDLNQYACESLRFNHPETQVRNE 339
Query: 261 AAEDFLELVKEWQKLCKRFAVNIVERENKQR 291
AEDFL LVKEW+ LCK ++ + +E +Q+
Sbjct: 340 MAEDFLSLVKEWEVLCKYCSL-VKSKEPQQK 369
>gi|449526100|ref|XP_004170052.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like, partial
[Cucumis sativus]
Length = 753
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 114/163 (69%), Positives = 142/163 (87%)
Query: 359 RIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKIL 418
+I+ ICYGDPNE+ KRGL KV WKGY + ED+WEPI+GL NC E++K+FV +G+KSKIL
Sbjct: 296 KILAICYGDPNETKKRGLFLKVRWKGYGSDEDTWEPIDGLSNCKEKLKDFVTSGYKSKIL 355
Query: 419 PLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVV 478
PLPGDVDVICGGPPCQGISG+NRFRN ++PL+DE+N+Q+V++MD+VE+L+PKYVLMENVV
Sbjct: 356 PLPGDVDVICGGPPCQGISGFNRFRNKENPLEDEKNKQLVVYMDLVEYLRPKYVLMENVV 415
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
DI+KF LGRYAL RL+ M YQ R G++AAG YGLPQFR+R
Sbjct: 416 DIVKFANGFLGRYALGRLISMNYQVRMGMMAAGAYGLPQFRMR 458
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 121/269 (44%), Positives = 175/269 (65%), Gaps = 9/269 (3%)
Query: 30 DDEDKIVSNVECHYAQARIGECIFDLGDCAYIKGEGTQK-HIGKILEFFKTTDGEEYFRV 88
DD ++++ + HY+QA++ ++L D A++K EG + +I KI+E F+ DG+ YF
Sbjct: 1 DDSEEVIQALH-HYSQAKVDNITYNLLDDAHVKAEGEEDDYICKIIEMFEAVDGQLYFTA 59
Query: 89 QWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSS 148
QW+YRA+DTV+K+ A + KR+F+S V +DNP+DC++ K+ +A+IP + K N +PS
Sbjct: 60 QWYYRAKDTVVKDHAHLINDKRVFFSEVRDDNPLDCLVKKLNIARIPLTMDEKKNCLPSC 119
Query: 149 DFYFDMEYCVEYSTFRTLLTG--KIHDLSLPSCTETVPTT----ATSTFFENMPNHGPHK 202
DFY DM Y + YS+F L T K+ + + + V T S + K
Sbjct: 120 DFYCDMLYLLPYSSFVKLPTSEKKVGSETSSTISSDVDTNEACEVNSQIGDVTQAQQCCK 179
Query: 203 AELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAA 262
++ALLDLYSGCG MSTGLCLG LS NLVT+WA+D ++ ACESL+ NHPE QVRNE A
Sbjct: 180 PDVALLDLYSGCGAMSTGLCLGGNLSGVNLVTKWAVDLNQYACESLRFNHPETQVRNEMA 239
Query: 263 EDFLELVKEWQKLCKRFAVNIVERENKQR 291
EDFL LVKEW+ LCK ++ + +E +Q+
Sbjct: 240 EDFLSLVKEWEVLCKYCSL-VKSKEPQQK 267
>gi|359478779|ref|XP_002283355.2| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Vitis
vinifera]
Length = 956
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 114/167 (68%), Positives = 138/167 (82%)
Query: 355 YEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFK 414
+EV +I+ ICYGDP + G R L+FKV WKGY S DSWEP EGL NC E IK+FV G+K
Sbjct: 504 FEVQKIIGICYGDPKDKGDRELHFKVRWKGYGPSADSWEPFEGLGNCCESIKDFVTEGYK 563
Query: 415 SKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLM 474
SKILPLPGDVDVICGGPPCQGISG+NRFRN ++PL+D +N+Q+V+FMD+V +LKP++VLM
Sbjct: 564 SKILPLPGDVDVICGGPPCQGISGFNRFRNKENPLEDPKNKQLVVFMDVVNYLKPRFVLM 623
Query: 475 ENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
ENVVDI+KF LGRYAL RL+ M YQ R G++AAG YGLPQFR+R
Sbjct: 624 ENVVDIVKFAGGYLGRYALGRLIGMNYQTRMGMMAAGAYGLPQFRMR 670
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/267 (44%), Positives = 165/267 (61%), Gaps = 31/267 (11%)
Query: 36 VSNVECHYAQARI-GECIFDLGDCAYIK-GEGTQKHIGKILEFFKTTDGEEYFRVQWFYR 93
+ CHY QA I G I +L D A++K G+ +I KI+E F DG YF QWFYR
Sbjct: 207 IVKARCHYRQAEIDGRVIVNLNDDAHVKAGDNADHYICKIVELFVALDGTPYFTAQWFYR 266
Query: 94 AEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSN--SIPSSDFY 151
A DTV+K+ A+ D KR+F+S + +DNP+DC++ K+ +A++P + L++ +I S D+Y
Sbjct: 267 ARDTVIKDHANLIDNKRVFFSEMRDDNPLDCLVQKLNIARVPHNLDLEARKLAISSCDYY 326
Query: 152 FDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGP----------- 200
+DM Y ++YS+F + LP V + A ST G
Sbjct: 327 YDMLYLLDYSSF----------IKLPPENSRVNSEALSTISSEANMDGSTCELKSDSEEV 376
Query: 201 ------HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPE 254
+E+ LLDLYSGCG MS+GLCLGAK+S NLVTRWA+D + ACES++LNHPE
Sbjct: 377 SQARERSLSEMTLLDLYSGCGAMSSGLCLGAKMSGVNLVTRWAIDINAYACESVRLNHPE 436
Query: 255 AQVRNEAAEDFLELVKEWQKLCKRFAV 281
QVRNE+AEDFL L++EW+KLC RF++
Sbjct: 437 TQVRNESAEDFLALLREWEKLCVRFSL 463
>gi|261414310|gb|ACX83573.1| DNA chromomethylase [Hieracium piloselloides]
Length = 607
Score = 254 bits (650), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 113/167 (67%), Positives = 138/167 (82%)
Query: 355 YEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFK 414
+EV +I+ +CYGDP E K GL K+ WKGY + ED+WEPIEGL +C ++IKEFV NGFK
Sbjct: 146 FEVEQILSVCYGDPKEMKKPGLYLKIRWKGYGSEEDTWEPIEGLSDCHDKIKEFVVNGFK 205
Query: 415 SKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLM 474
SK+LPLPGDVDVI GGPPCQGISG+NRFRN D PL+DE+N+Q+V++MDIVE+LKP++ LM
Sbjct: 206 SKLLPLPGDVDVITGGPPCQGISGFNRFRNKDKPLEDEKNKQLVVYMDIVEYLKPRFCLM 265
Query: 475 ENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
ENVVDI++F K LGRYAL RLV M Y AR G++ AG YGLPQFR R
Sbjct: 266 ENVVDIIRFAKGFLGRYALGRLVSMNYIARVGLMVAGSYGLPQFRRR 312
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 68/79 (86%)
Query: 203 AELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAA 262
+E+ +LDLYSGCG MSTGLCLGA ++ NLVTRWA+D +K ACESLKLNHPE + RNE+A
Sbjct: 35 SEMRMLDLYSGCGAMSTGLCLGANMADVNLVTRWAVDLNKYACESLKLNHPETEARNESA 94
Query: 263 EDFLELVKEWQKLCKRFAV 281
EDFL+L+KEW+KLC+ + +
Sbjct: 95 EDFLQLLKEWEKLCQSYGL 113
>gi|224057130|ref|XP_002299134.1| DNA methyltransferase [Populus trichocarpa]
gi|222846392|gb|EEE83939.1| DNA methyltransferase [Populus trichocarpa]
Length = 973
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 113/168 (67%), Positives = 139/168 (82%), Gaps = 1/168 (0%)
Query: 355 YEVARIVDICYGDPNE-SGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGF 413
+EV +I+++C+GDP E G+R L FKV WK Y D+WEPI GL NC E IK+FV +G+
Sbjct: 521 FEVEKILEVCHGDPKEIGGQRDLYFKVSWKNYGPDYDTWEPISGLSNCREAIKKFVMHGY 580
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
KS ILPLPGDV+VICGGPPCQGISG+NRFRNV +PL+D +N+Q+V+FMDIV+FLKPK+VL
Sbjct: 581 KSNILPLPGDVEVICGGPPCQGISGFNRFRNVKNPLEDPKNKQLVVFMDIVDFLKPKFVL 640
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
MENVVD+LKF LGRYA+ LV MKYQAR G++AAG YGLPQFR+R
Sbjct: 641 MENVVDLLKFADGFLGRYAMGCLVSMKYQARLGMLAAGAYGLPQFRMR 688
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/273 (43%), Positives = 170/273 (62%), Gaps = 12/273 (4%)
Query: 30 DDEDKIVSNVECHYAQARIGECIFDLGDCAYIKG-EGTQKHIGKILEFFKTTDGEEYFRV 88
DD ++I+ CHY +A + I++L D A+++ +G +I +I+E F++ D +F
Sbjct: 221 DDSEEII-KARCHYKRAEVDGIIYNLYDDAHVQASDGEADYICRIIEMFESEDRTPHFTA 279
Query: 89 QWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSS 148
QW+YR+ DT++K+ D K +F+S + NDNP+DC+ K+ + ++ +G+ S + +
Sbjct: 280 QWYYRSTDTIIKDKY-ISDPKCVFFSEIRNDNPLDCLTRKLKIVRL--ALGVDSETRRAK 336
Query: 149 ----DFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFE---NMPNHGPH 201
DFY DM Y + YSTF L + S T + A FE + G
Sbjct: 337 TLNCDFYCDMLYLLPYSTFVKLPSENNTTAPESSSTISSDIDAAGVKFECDEVCESSGRR 396
Query: 202 KAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEA 261
K+E+ALLDLYSGCG MSTGLCLGA LS NLVT+WA+D +K ACESL+LNHPE QVRNE
Sbjct: 397 KSEVALLDLYSGCGAMSTGLCLGANLSGLNLVTKWAVDLNKHACESLRLNHPETQVRNET 456
Query: 262 AEDFLELVKEWQKLCKRFAVNIVERENKQRSMS 294
AEDFL L+KEW+KLC RF++ + KQ++ S
Sbjct: 457 AEDFLMLLKEWEKLCIRFSLVKNDDPEKQQTYS 489
>gi|68655470|emb|CAJ01708.1| chromomethylase 1 [Hordeum vulgare subsp. vulgare]
Length = 735
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/168 (65%), Positives = 133/168 (79%), Gaps = 2/168 (1%)
Query: 354 EYEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGF 413
E+ V +++ ICYG K G+ FKV WKGY ED+WEPIE L +CP +IKEFV+ G+
Sbjct: 263 EFVVQKLLGICYG--GSGRKNGIYFKVQWKGYGPEEDTWEPIENLSDCPLKIKEFVQEGY 320
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
K ILP PG VDVICGGPPCQGISG+NRFRN D+PL DE+N+Q+V +MDIV +L+PK+VL
Sbjct: 321 KRNILPQPGQVDVICGGPPCQGISGFNRFRNRDNPLQDEKNQQMVTYMDIVSYLQPKFVL 380
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
MENVVDILKF LGRYALSRLV + YQAR G++ AGCYGLPQFR+R
Sbjct: 381 MENVVDILKFADGYLGRYALSRLVSLNYQARLGMMVAGCYGLPQFRMR 428
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/242 (44%), Positives = 142/242 (58%), Gaps = 21/242 (8%)
Query: 45 QARIGECIFDLGDCAYI-KGEGTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTVMKEAA 103
+A++ + + LGD Y+ GE +IG+I EFF+ D YF +WF+R EDTV+ A
Sbjct: 11 EAKVDDVDYTLGDDVYVMAGENEADYIGRITEFFEGVDKTNYFTCRWFFRPEDTVISRAK 70
Query: 104 ----DFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIG--LKSNSIPSSDFYFDMEYC 157
HD KR+F S NDNP+DCIISKV + + P K+ + +D Y+DM Y
Sbjct: 71 FVNDHTHDPKRVFLSEEKNDNPLDCIISKVKIIHVDPNTDSVTKAKLVAGTDLYYDMSYS 130
Query: 158 VEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGM 217
V YSTF ++PS T +T EN G +LLDLYSGCGGM
Sbjct: 131 VAYSTF----------ANIPSDTTENSGISTDADSEN----GTPVKTASLLDLYSGCGGM 176
Query: 218 STGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQKLCK 277
STGLCLG+ L+ L T+WA+D + AC+SLK NHP+ +VRNE AEDFL L+KEW LC
Sbjct: 177 STGLCLGSALAGLKLETKWAVDLNSFACKSLKYNHPKTEVRNEKAEDFLALLKEWVILCD 236
Query: 278 RF 279
++
Sbjct: 237 KY 238
>gi|297746421|emb|CBI16477.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/260 (46%), Positives = 169/260 (65%), Gaps = 28/260 (10%)
Query: 28 SDDDEDKIVSNVECHYAQARI-GECIFDLGDCAYIK-GEGTQKHIGKILEFFKTTDGEEY 85
+ DD ++IV CHY QA I G I +L D A++K G+ +I KI+E F DG Y
Sbjct: 43 TKDDSEEIVK-ARCHYRQAEIDGRVIVNLNDDAHVKAGDNADHYICKIVELFVALDGTPY 101
Query: 86 FRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSN-- 143
F QWFYRA DTV+K+ A+ D KR+F+S + +DNP+DC++ K+ +A++P + L++
Sbjct: 102 FTAQWFYRARDTVIKDHANLIDNKRVFFSEMRDDNPLDCLVQKLNIARVPHNLDLEARKL 161
Query: 144 SIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLP--SCTETVPTTATSTFFENMPNHGPH 201
+I S D+Y+DM Y ++YS+F + LP + +E V +
Sbjct: 162 AISSCDYYYDMLYLLDYSSF----------IKLPPENNSEEVSQARERSL---------- 201
Query: 202 KAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEA 261
+E+ LLDLYSGCG MS+GLCLGAK+S NLVTRWA+D + ACES++LNHPE QVRNE+
Sbjct: 202 -SEMTLLDLYSGCGAMSSGLCLGAKMSGVNLVTRWAIDINAYACESVRLNHPETQVRNES 260
Query: 262 AEDFLELVKEWQKLCKRFAV 281
AEDFL L++EW+KLC +F V
Sbjct: 261 AEDFLALLREWEKLCCKFLV 280
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 100/142 (70%), Positives = 119/142 (83%)
Query: 380 VHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGY 439
V WKGY S DSWEP EGL NC E IK+FV G+KSKILPLPGDVDVICGGPPCQGISG+
Sbjct: 385 VRWKGYGPSADSWEPFEGLGNCCESIKDFVTEGYKSKILPLPGDVDVICGGPPCQGISGF 444
Query: 440 NRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHM 499
NRFRN ++PL+D +N+Q+V+FMD+V +LKP++VLMENVVDI+KF LGRYAL RL+ M
Sbjct: 445 NRFRNKENPLEDPKNKQLVVFMDVVNYLKPRFVLMENVVDIVKFAGGYLGRYALGRLIGM 504
Query: 500 KYQARFGIIAAGCYGLPQFRLR 521
YQ R G++AAG YGLPQFR+R
Sbjct: 505 NYQTRMGMMAAGAYGLPQFRMR 526
>gi|168034417|ref|XP_001769709.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679058|gb|EDQ65510.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 700
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 101/170 (59%), Positives = 130/170 (76%), Gaps = 2/170 (1%)
Query: 353 GEYEVARIVDICY-GDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRN 411
GEYEV R++ I + G+ +E K + +V WKGY+ +D+WEP L +CPER+KEFV
Sbjct: 247 GEYEVERLLGIRWVGEVSEKDKEVME-QVRWKGYAPEDDTWEPAASLDHCPERVKEFVLE 305
Query: 412 GFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKY 471
G + K+LPLPGD DVICGGPPCQG SG+NRFRN PL D RN+Q+V++MDIV+FL+P++
Sbjct: 306 GRRQKLLPLPGDCDVICGGPPCQGASGFNRFRNRVDPLADPRNKQMVVYMDIVDFLRPRF 365
Query: 472 VLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+MENVVDILKF LGRYAL+R V M YQ++ GI+ AGCYG+PQFR R
Sbjct: 366 FIMENVVDILKFCDGILGRYALARAVGMNYQSKVGIMVAGCYGMPQFRAR 415
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 144/245 (58%), Gaps = 18/245 (7%)
Query: 42 HYAQARIGECIFDLGDCAYIKGEGTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTVMKE 101
HY QA + ++ LGDC ++ IG+I EF++ D +F QWF+R+ DTV +
Sbjct: 1 HYRQAEVEGKLYKLGDCVHVHSGLEDPFIGRITEFYEKEDKSPWFHAQWFFRSYDTVSRN 60
Query: 102 AADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSI--PSSDFYFDMEYCVE 159
HD K+++YS V ++N + I+ KV V +I K + I P+ D+YFD Y +
Sbjct: 61 ----HDPKKIYYSEVADENELHVIVGKVSVIRIASKDRSDRSPIKTPACDYYFDKGYMFQ 116
Query: 160 YSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGMST 219
Y TF TL LP + ST +N + K + LLDLY GCG MST
Sbjct: 117 YGTFYTLPK------DLPG------HGSKSTESDNSCSDSNDKKDFYLLDLYCGCGAMST 164
Query: 220 GLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQKLCKRF 279
G+CLG L+ NLVT+WA+D ++ AC SLK NHPE VRNEAAED+L+L+KEW+KLC+++
Sbjct: 165 GICLGMNLAGINLVTKWAVDLNEFACMSLKYNHPETTVRNEAAEDYLQLLKEWKKLCEKY 224
Query: 280 AVNIV 284
V V
Sbjct: 225 PVGCV 229
>gi|224076024|ref|XP_002304878.1| hypothetical protein POPTRDRAFT_555246 [Populus trichocarpa]
gi|222842310|gb|EEE79857.1| hypothetical protein POPTRDRAFT_555246 [Populus trichocarpa]
Length = 250
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 90/154 (58%), Positives = 113/154 (73%), Gaps = 13/154 (8%)
Query: 356 EVARIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKS 415
+V +I++ICYGDP K Y D+WEPI GL NC E IK FV +G+ S
Sbjct: 18 KVEKILEICYGDPK-------------KNYGPDYDTWEPISGLINCREAIKNFVMHGYLS 64
Query: 416 KILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLME 475
ILPLPGDVDVICGGPPCQGISG+NRFRN SPLDD +N+Q+++FMD V+FL+PK+VL+E
Sbjct: 65 NILPLPGDVDVICGGPPCQGISGFNRFRNTKSPLDDPKNKQLIVFMDTVDFLRPKFVLIE 124
Query: 476 NVVDILKFDKASLGRYALSRLVHMKYQARFGIIA 509
NVVD+LKF +GRYA+ L +MKYQAR G++
Sbjct: 125 NVVDLLKFADGFIGRYAMGCLTNMKYQARLGMLG 158
>gi|115480860|ref|NP_001064023.1| Os10g0104900 [Oryza sativa Japonica Group]
gi|113638632|dbj|BAF25937.1| Os10g0104900, partial [Oryza sativa Japonica Group]
Length = 406
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 79/100 (79%), Positives = 87/100 (87%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
GDVDVICGGPPCQGISG+NRFRN PL DE+N+Q+V FMDIV +LKPKYVLMENVVDIL
Sbjct: 1 GDVDVICGGPPCQGISGFNRFRNRKEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDIL 60
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
KF LGRYALSRLV MKYQAR G++ AGCYGLPQFR+R
Sbjct: 61 KFADGYLGRYALSRLVAMKYQARLGMMVAGCYGLPQFRMR 100
>gi|357490109|ref|XP_003615342.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355516677|gb|AES98300.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 800
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 108/162 (66%), Gaps = 20/162 (12%)
Query: 360 IVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILP 419
+ D+ Y D N+ GL KV WKGY+ +D WEPI GL NC E IK+FV GFKS
Sbjct: 362 VHDVRYDDANKETGPGLYIKVSWKGYNYDKDIWEPINGLSNCKEMIKDFVTRGFKS---- 417
Query: 420 LPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
I G+NRFRN +PLDDE+N+Q++++MDIV++L+P++ LMENVV+
Sbjct: 418 ----------------IRGFNRFRNFANPLDDEKNKQLMVYMDIVQYLQPRFTLMENVVN 461
Query: 480 ILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L+F + LGRYAL RLV M YQ+R GI+AA YGL QFRLR
Sbjct: 462 LLRFLEGFLGRYALGRLVQMNYQSRLGILAARAYGLRQFRLR 503
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 133/241 (55%), Gaps = 36/241 (14%)
Query: 28 SDDDEDKIVSNVECHYAQARI-GECIFDLGDCAYIKGEGTQKH-IGKILEFFKTTDGEEY 85
S+ DED+++ CHY +A++ G I+ L D A++KGE H I KI+E F+ DGE Y
Sbjct: 153 SNSDEDEVLQ-ARCHYTEAKVDGGVIYKLYDDAHVKGEKDDYHFICKIMEMFEAVDGELY 211
Query: 86 FRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNS- 144
F KR+F S V +DNP+DC++ K+ +A + K + +
Sbjct: 212 FTP--------------------KRVFLSEVQDDNPLDCLVEKLTIALLELKKDFDATND 251
Query: 145 -IPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKA 203
IP +Y D Y +E S+ + ++ + + +E +A + N K
Sbjct: 252 VIPPCKYYCDTLYLLEISSTIS------NETEVNAKSEVDSKSAITDI-----NDDKKKP 300
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
EL LLDLYSGCGGMSTGLC LS +++VT+W +D +K AC+SLKLNHPE +VRNE +
Sbjct: 301 ELKLLDLYSGCGGMSTGLCQWRILSGSDIVTKWVVDLNKDACQSLKLNHPETEVRNEEED 360
Query: 264 D 264
D
Sbjct: 361 D 361
>gi|16755863|gb|AAL28119.1|AF433678_1 putative chromomethylase MTH1 [Triticum aestivum]
Length = 107
Score = 169 bits (427), Expect = 4e-39, Method: Composition-based stats.
Identities = 70/96 (72%), Positives = 85/96 (88%)
Query: 426 VICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDK 485
++CGGPPCQGISG NRFRN + PL+D+RN+Q+V+FMD+V +L+PKYVLMENVVDILKF
Sbjct: 1 MVCGGPPCQGISGLNRFRNYNEPLEDDRNKQLVVFMDVVNYLRPKYVLMENVVDILKFAD 60
Query: 486 ASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
LGRYALSRLV M+YQAR G++ AGCYGLPQFR+R
Sbjct: 61 GFLGRYALSRLVSMRYQARLGLMVAGCYGLPQFRMR 96
>gi|297600571|ref|NP_001049442.2| Os03g0226800 [Oryza sativa Japonica Group]
gi|255674328|dbj|BAF11356.2| Os03g0226800, partial [Oryza sativa Japonica Group]
Length = 130
Score = 168 bits (425), Expect = 8e-39, Method: Composition-based stats.
Identities = 73/100 (73%), Positives = 87/100 (87%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G VDVICGGPPCQGISG+NRFR + PL+DE+N+Q+V+FMDIV++L+PKYVLMENVVDIL
Sbjct: 4 GAVDVICGGPPCQGISGFNRFRKHNDPLEDEKNKQLVVFMDIVKYLRPKYVLMENVVDIL 63
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
KF LGRYA+S LV M YQAR G++AAG YGLPQFR+R
Sbjct: 64 KFADGFLGRYAMSCLVAMNYQARLGMMAAGYYGLPQFRMR 103
>gi|147801053|emb|CAN77849.1| hypothetical protein VITISV_020833 [Vitis vinifera]
Length = 631
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 97/134 (72%), Gaps = 2/134 (1%)
Query: 173 DLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNL 232
+LS +C +TV F M +H P+K ELALLD+YSGCGGMSTGLCLGAKLS +L
Sbjct: 498 NLSTSACLKTVHMNGIKPEFNRMSSHKPYKPELALLDIYSGCGGMSTGLCLGAKLSGVDL 557
Query: 233 VTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQKLCKRFAVNIVERENKQRS 292
VTRWALD +KSACESLKLNHPE Q+RNE+AEDFL+L+KEW KLCKR+ V V+ K S
Sbjct: 558 VTRWALDINKSACESLKLNHPETQIRNESAEDFLDLLKEWDKLCKRYVVKDVQESLKVNS 617
Query: 293 MSQRVTRNSVNSPS 306
R + VNS +
Sbjct: 618 RVLRAAK--VNSKT 629
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 73/114 (64%), Gaps = 19/114 (16%)
Query: 81 DGEEYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGL 140
D E+YFRVQWF+R EDTVM+E FH++KRLFYS ++NDN +DCI+SKV L
Sbjct: 2 DDEDYFRVQWFFRPEDTVMEEEGAFHEKKRLFYSNLVNDNLLDCIVSKV---------NL 52
Query: 141 KSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFEN 194
KSNSI DFY+DM+Y ++YSTF T+ G ET+ + FFE+
Sbjct: 53 KSNSILPCDFYYDMKYLIDYSTFCTMEVG----------GETLQVGTSVGFFES 96
>gi|16755865|gb|AAL28120.1|AF433679_1 putative chromomethylase MTH2 [Triticum aestivum]
Length = 90
Score = 150 bits (379), Expect = 1e-33, Method: Composition-based stats.
Identities = 63/90 (70%), Positives = 78/90 (86%)
Query: 426 VICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDK 485
++CGGPPCQGISG NRFRN + PL+D+RN+Q+V+FMD+V +L+PKYVLMENVVDILKF
Sbjct: 1 MVCGGPPCQGISGLNRFRNYNEPLEDDRNKQLVVFMDVVNYLRPKYVLMENVVDILKFAD 60
Query: 486 ASLGRYALSRLVHMKYQARFGIIAAGCYGL 515
LGRYALSRLV M+ QAR G++ AGCYG+
Sbjct: 61 GFLGRYALSRLVSMRCQARLGLMVAGCYGV 90
>gi|224076026|ref|XP_002304879.1| hypothetical protein POPTRDRAFT_555247 [Populus trichocarpa]
gi|222842311|gb|EEE79858.1| hypothetical protein POPTRDRAFT_555247 [Populus trichocarpa]
Length = 363
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 135/232 (58%), Gaps = 16/232 (6%)
Query: 33 DKIVSNVECHYAQARIGECIFDLGDCAYIKG-EGTQKHIGKILEFFKTTDGEEYFRVQWF 91
+KIV CHY +A + I+DL A+++ +G +I +I E F++ D YF QW+
Sbjct: 129 NKIV-KARCHYTRAEVDRIIYDLYYDAHVQASDGEPDYICRISEMFESVDRTLYFTTQWY 187
Query: 92 YRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSS--D 149
YR+ T++K+ D K +F+S + NDNP++C+ K+ + ++ + ++ SS D
Sbjct: 188 YRSTVTIIKDKY-ISDPKCVFFSEIRNDNPLECLTWKLNIVRLALNVDPENRRARSSGCD 246
Query: 150 FYFDMEYCVEYSTFRTLLTGKIHDLSLPSCT----ETVPTTATSTFFENMPNHGPHKAEL 205
FY DM Y + YSTF L T ++ + P + + S E G K+E+
Sbjct: 247 FYCDMLYLLPYSTFVRLPTE--NNTTGPESSTISNDIDAAGVKSECDEVCETSGSSKSEV 304
Query: 206 ALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
ALLDLYSGCG MSTGLCLG NLVT+WA+D + +AC+SL+LNHPE QV
Sbjct: 305 ALLDLYSGCGAMSTGLCLGL-----NLVTKWAVDLNINACQSLRLNHPETQV 351
>gi|147801051|emb|CAN77847.1| hypothetical protein VITISV_020831 [Vitis vinifera]
Length = 320
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 64/75 (85%), Positives = 68/75 (90%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
GD DVICGGPPCQGISGYNR RN DSP DDERNRQI++FMDIV FLKPKYVLMENVVDIL
Sbjct: 183 GDADVICGGPPCQGISGYNRHRNADSPFDDERNRQIIVFMDIVNFLKPKYVLMENVVDIL 242
Query: 482 KFDKASLGRYALSRL 496
+F K S+GRYALSRL
Sbjct: 243 QFAKGSVGRYALSRL 257
>gi|307106990|gb|EFN55234.1| hypothetical protein CHLNCDRAFT_52630 [Chlorella variabilis]
Length = 1211
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 96/149 (64%)
Query: 373 KRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPP 432
+R L FKV + ++ W + L+ E ++ FVR + +++P PG+VD ICGGPP
Sbjct: 492 ERWLEFKVVMEAGGEQQEVWLSRKQLKGQDELLRGFVRKLRERQLIPFPGEVDFICGGPP 551
Query: 433 CQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYA 492
CQGISG NR + L D RNRQ+ +F+ E+ KPKYVLMENV DILK + +YA
Sbjct: 552 CQGISGNNRHAMTEDILQDPRNRQLPVFIAYSEWFKPKYVLMENVQDILKKEDGLYIKYA 611
Query: 493 LSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +++M+YQ R G++AAG +G+PQ R R
Sbjct: 612 MGSMLNMRYQVRVGLLAAGNFGVPQGRWR 640
>gi|341868919|gb|AEK98583.1| chromomethyltransferase 3a1 [Vitis amurensis]
Length = 70
Score = 134 bits (338), Expect = 1e-28, Method: Composition-based stats.
Identities = 62/70 (88%), Positives = 65/70 (92%)
Query: 436 ISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSR 495
ISGYNRFRNVDSPL DERN QIVIFMDIV+FLKPKYVLMENVVD+LK DKASLGRYA+SR
Sbjct: 1 ISGYNRFRNVDSPLSDERNHQIVIFMDIVKFLKPKYVLMENVVDLLKLDKASLGRYAISR 60
Query: 496 LVHMKYQARF 505
L HMKYQAR
Sbjct: 61 LGHMKYQARL 70
>gi|2865418|gb|AAC02661.1| chromomethylase [Arabidopsis thaliana]
Length = 248
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 116/208 (55%), Gaps = 18/208 (8%)
Query: 25 GAYSDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIKG-EGTQKHIGKILEFFKTTDGE 83
G +D+E I+ +CH+ +A + + +L D Y+ G G K I K++E F+ DG
Sbjct: 55 GGKKEDEE--IIKQAKCHFDKALVDGVLINLNDDVYVTGLPGKLKFIAKVIELFEADDGV 112
Query: 84 EYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIP-PKIG--L 140
Y R +W+YR EDT+++ + KR+F S N NP+ CI SKV +A++P PKI +
Sbjct: 113 PYCRFRWYYRPEDTLIERFSHLVQPKRVFLSNDENGNPLTCIWSKVNIAKVPLPKITSRI 172
Query: 141 KSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGP 200
+ IP D+Y+DM+Y V Y F + G + ++ + + FEN+
Sbjct: 173 EQRVIPPCDYYYDMKYEVPYLNFTSADDGSDA-------SSSLSSDSALNCFENL----- 220
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLS 228
HK E LLDLYSGCG MSTG C+GA +S
Sbjct: 221 HKDEKFLLDLYSGCGAMSTGFCMGASIS 248
>gi|341868911|gb|AEK98579.1| chromomethyltransferase 1a2 [Vitis amurensis]
gi|341868913|gb|AEK98580.1| chromomethyltransferase 1a3 [Vitis amurensis]
Length = 70
Score = 112 bits (281), Expect = 3e-22, Method: Composition-based stats.
Identities = 49/70 (70%), Positives = 58/70 (82%)
Query: 436 ISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSR 495
+SG+NRFRN ++PLDD +N Q+V+FMDIV +LKPKYVLMENVVDILKF LGRYA+ R
Sbjct: 1 VSGFNRFRNTEAPLDDPKNHQLVVFMDIVNYLKPKYVLMENVVDILKFAGGFLGRYAMGR 60
Query: 496 LVHMKYQARF 505
LV M YQAR
Sbjct: 61 LVSMNYQARL 70
>gi|110288523|gb|ABB46585.2| DNA cytosine methyltransferase MET2a, putative, expressed [Oryza
sativa Japonica Group]
Length = 371
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/65 (78%), Positives = 56/65 (86%)
Query: 457 IVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLP 516
+V FMDIV +LKPKYVLMENVVDILKF LGRYALSRLV MKYQAR G++ AGCYGLP
Sbjct: 1 MVTFMDIVAYLKPKYVLMENVVDILKFADGYLGRYALSRLVAMKYQARLGMMVAGCYGLP 60
Query: 517 QFRLR 521
QFR+R
Sbjct: 61 QFRMR 65
>gi|2952277|gb|AAC05484.1| chromomethylase CMT2 [Brassica oleracea var. italica]
Length = 62
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/61 (85%), Positives = 58/61 (95%)
Query: 437 SGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRL 496
SGYNRFR+VDSPL DERN+QIV+FMDIVE+LKPK+VLMENVVDIL+ DK SLGRYALSRL
Sbjct: 1 SGYNRFRDVDSPLTDERNQQIVVFMDIVEYLKPKFVLMENVVDILRLDKGSLGRYALSRL 60
Query: 497 V 497
V
Sbjct: 61 V 61
>gi|326454730|gb|ADZ74246.1| chromomethyltransferase 1a1 [Vitis amurensis]
Length = 70
Score = 109 bits (273), Expect = 3e-21, Method: Composition-based stats.
Identities = 48/70 (68%), Positives = 57/70 (81%)
Query: 436 ISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSR 495
+SG+NRFRN ++ LDD +N Q+V+FMDIV +LKPKYVLMENVVDILKF LGRYA+ R
Sbjct: 1 VSGFNRFRNTEASLDDPKNHQLVVFMDIVNYLKPKYVLMENVVDILKFAGGFLGRYAMGR 60
Query: 496 LVHMKYQARF 505
LV M YQAR
Sbjct: 61 LVFMNYQARL 70
>gi|384244940|gb|EIE18436.1| S-adenosyl-L-methionine-dependent methyltransferase, partial
[Coccomyxa subellipsoidea C-169]
Length = 418
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 66/99 (66%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
DVD + GGPPCQG+SG NR ++D RNRQ+ F D++E+ +P YVLMENV+DI K
Sbjct: 1 DVDAVMGGPPCQGVSGLNRHAKRADIVNDPRNRQVQAFYDVIEWFQPGYVLMENVLDIFK 60
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++A SRL++M+YQ R G IAA +G PQ R R
Sbjct: 61 KQDGMYAKFAASRLLNMRYQTRLGCIAACDHGAPQGRWR 99
>gi|159461698|gb|ABW96888.1| MET1-type DNA-methyltransferase [Elaeis guineensis]
Length = 1543
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
K K LP+PG+VD I GGPPCQG SG NRF S + I+ F+ E+ +P++ L
Sbjct: 1191 KLKNLPMPGEVDFINGGPPCQGFSGMNRFSQ--STWSKVQCEMILAFLSFAEYFRPRFFL 1248
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F+K R L+ L+ M YQ RFGI+ AG YG+PQ R R
Sbjct: 1249 LENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVPQSRKR 1296
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Query: 205 LALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEA 255
LA LD+++GCGG+S GL + S + T+WA++ ++ A E+ NHPE
Sbjct: 1105 LATLDIFAGCGGLSAGL----QQSGVSF-TKWAIEYEQPAGEAFSENHPET 1150
>gi|2895087|gb|AAC39355.1| Met1-type cytosine DNA-methyltransferase [Daucus carota]
Length = 1545
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
Query: 416 KILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLME 475
K LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +PKY L+E
Sbjct: 1196 KNLPLPGQVDFINGGPPCQGFSGMNRFNQ--SSWSKVQCEMILAFLSFADYYRPKYFLLE 1253
Query: 476 NVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
NV + F+K R A++ L+ M YQ RFGI+ AG YG+PQ R R
Sbjct: 1254 NVRTFVSFNKGQTFRLAIASLLDMGYQVRFGILEAGAYGVPQSRKR 1299
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 5/51 (9%)
Query: 205 LALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEA 255
LA LD+++GCGG+S GL CT T+WA++ +++A ++ KLNHPE+
Sbjct: 1108 LATLDIFAGCGGLSEGLQKSG--VCT---TKWAIEYEEAAGDAFKLNHPES 1153
>gi|2895089|gb|AAC39356.1| Met2-type cytosine DNA-methyltransferase [Daucus carota]
Length = 1761
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 66/106 (62%), Gaps = 2/106 (1%)
Query: 416 KILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLME 475
K LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +PKY L+E
Sbjct: 1411 KNLPLPGQVDFINGGPPCQGFSGMNRFNQ--SSWSKVQCEMILAFLSFADYYRPKYFLLE 1468
Query: 476 NVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
NV + + F+K R A++ L+ M YQ RFGI+ AG +G+PQ R R
Sbjct: 1469 NVRNFVSFNKGQTFRLAIASLLEMGYQVRFGILEAGAFGVPQSRKR 1514
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 99/237 (41%), Gaps = 48/237 (20%)
Query: 42 HYAQARIGECIFDLGDCAYIKGEGTQKHIGKILEFF------KTTDGEEYFRVQWFYRAE 95
+A R+G+ F G +K I ++LE + D +V+ FYR E
Sbjct: 1155 QFATERVGQETFKGGRNVGLKAFA----ICQLLEVVVPKKPQQADDSSTEVKVRRFYRPE 1210
Query: 96 DTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSD---FYF 152
D + E A D + ++YS + V+ I + V K + +P+ D Y
Sbjct: 1211 D-ISDEKAYCSDIREVYYSEETHTLLVEAIEGRCEVR--------KKSDLPTCDAPTIYE 1261
Query: 153 DMEYC-VEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENM-PNHGPHK-------A 203
+ YC Y + L LPS + +T + ++ N G K A
Sbjct: 1262 HVFYCEYLYDPHKGSLK------QLPSNIKLRYSTVKGAYDSSLRKNKGKCKEGEDDLEA 1315
Query: 204 E------LALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPE 254
E LA LD+++GCGG+S GL T+WA++ ++ A ++ KLNHP+
Sbjct: 1316 EKSKENCLATLDIFAGCGGLSEGLQQSGVCR-----TKWAIEYEEPAGDAFKLNHPD 1367
>gi|341868915|gb|AEK98581.1| chromomethyltransferase 2a1 [Vitis amurensis]
Length = 70
Score = 104 bits (260), Expect = 9e-20, Method: Composition-based stats.
Identities = 44/69 (63%), Positives = 58/69 (84%)
Query: 436 ISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSR 495
ISG+NRFRN ++PL+D +N+Q+V+FMD+V +LKP++VLMENVVDI+KF LGRYAL R
Sbjct: 1 ISGFNRFRNKENPLEDPKNKQLVVFMDVVNYLKPRFVLMENVVDIVKFAGGYLGRYALGR 60
Query: 496 LVHMKYQAR 504
L+ M YQ R
Sbjct: 61 LIGMNYQTR 69
>gi|116062016|dbj|BAF34636.1| DNA methyltransferase 1b [Brassica rapa]
Length = 1519
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LPLPG VD I GGPPCQG SG NRF SP + + ++ F+ V++ +P+Y L
Sbjct: 1165 QKRTLPLPGQVDFINGGPPCQGFSGMNRFSQ--SPWSKIQCQMVLAFLSFVDYFRPRYFL 1222
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + + K + + L+ L+ M YQ RFG++ AG YG+ Q R R
Sbjct: 1223 LENVRNFVSYSKGQMFKLTLASLLEMGYQVRFGVLEAGAYGVSQSRKR 1270
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 196 PNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEA 255
P+ P + LA LD+++GCGG+S GL A +S T+WA++ + A E+ + NHPE
Sbjct: 1070 PDELPKEMRLATLDIFAGCGGLSQGL-EQAGVS----ATKWAIEYEGPAGEAFRKNHPET 1124
Query: 256 QV 257
V
Sbjct: 1125 TV 1126
>gi|357115052|ref|XP_003559306.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1A-like [Brachypodium
distachyon]
Length = 1528
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
K K LP+PG+V+ I GGPPCQG SG NRF SP + I+ F+ E+ +P++ L
Sbjct: 1179 KIKNLPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFL 1236
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F+K R L+ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1237 LENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKR 1284
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 21/180 (11%)
Query: 88 VQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPS 147
V+ YR +D + A D + ++YS M PV I K ++ K L +++P
Sbjct: 972 VRRLYRPDD-ISSARAYSSDIREVYYSEDMLSVPVAMIEGKC---EVTTKNNLPDSNLPV 1027
Query: 148 S-DFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFE----NMPNHGPHK 202
D F EY + T L ++ L + PT+ + + + K
Sbjct: 1028 VVDHVFYCEYLYDPDT--GALKQLQSNVKLMTIARKAPTSKKNKGKQICDSDQAGSDKQK 1085
Query: 203 A-----ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
A LA LD+++GCGG+S GL L T+WA++ ++ A ++ NHPEA V
Sbjct: 1086 AAASENSLATLDIFAGCGGLSEGLQLSGASH-----TKWAIEYEEPAGQAFGENHPEAAV 1140
>gi|218193912|gb|EEC76339.1| hypothetical protein OsI_13909 [Oryza sativa Indica Group]
Length = 1527
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
K K LP+PG+V+ I GGPPCQG SG NRF SP + I+ F+ E+ +P++ L
Sbjct: 1178 KIKNLPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFL 1235
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F+K R L+ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1236 LENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKR 1283
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 27/184 (14%)
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
+V+ FYR +D + A D + ++YS D I V++ + ++ LK + +P
Sbjct: 970 KVRRFYRPDD-ISSTKAYSSDIREVYYSE-------DIISVPVVMIEGKCEVRLKDD-LP 1020
Query: 147 SSDFYFDME--YCVEY--STFRTLLTGKIHDLSLPSCTETVPTTATSTFFE--------- 193
+SD +E +C EY L ++ L + T VP + + +
Sbjct: 1021 NSDLPAVVEHVFCCEYLYDPANGALKQLPPNVRLVTLTRKVPASKKNKGKQICDIELGGS 1080
Query: 194 NMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHP 253
+ P G + LA LD+++GCGG+S GL LS +T+WA++ ++ A ++ NHP
Sbjct: 1081 DKPKDGQSENCLATLDIFAGCGGLSEGLQRSG-LS----LTKWAIEYEEPAGDAFGENHP 1135
Query: 254 EAQV 257
EA V
Sbjct: 1136 EAAV 1139
>gi|18653391|gb|AAL77415.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
Length = 1522
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
K K LP+PG+V+ I GGPPCQG SG NRF SP + I+ F+ E+ +P++ L
Sbjct: 1173 KIKNLPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFL 1230
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F+K R L+ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1231 LENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKR 1278
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 27/184 (14%)
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
+V+ FYR +D + A D + ++YS D I V++ + ++ LK + +P
Sbjct: 965 KVRRFYRPDD-ISSTKAYSSDIREVYYSE-------DIISVPVVMIEGKCEVRLKDD-LP 1015
Query: 147 SSDFYFDME--YCVEY--STFRTLLTGKIHDLSLPSCTETVPTTATSTFFE--------- 193
+SD +E +C EY L ++ L + T VP + + +
Sbjct: 1016 NSDLPAVVEHVFCCEYLYDPANGALKQLPPNVRLVTLTRKVPASKKNKGKQICDIELGGS 1075
Query: 194 NMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHP 253
+ P G + LA LD+++GCGG+S GL + S +L T+WA++ ++ A ++ NHP
Sbjct: 1076 DKPKDGQSENCLATLDIFAGCGGLSEGL----QRSGLSL-TKWAIEYEEPAGDAFGENHP 1130
Query: 254 EAQV 257
EA V
Sbjct: 1131 EAAV 1134
>gi|75233438|sp|Q7Y1I7.1|DNM1A_ORYSJ RecName: Full=DNA (cytosine-5)-methyltransferase 1A; Short=OsMET1a;
AltName: Full=DNA methyltransferase 1-1; Short=OsMET1-1
gi|31126751|gb|AAP44671.1| putative DNA (cytosine-5-)-methyltransferase [Oryza sativa Japonica
Group]
gi|171196101|dbj|BAG15928.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
gi|222625970|gb|EEE60102.1| hypothetical protein OsJ_12965 [Oryza sativa Japonica Group]
Length = 1527
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
K K LP+PG+V+ I GGPPCQG SG NRF SP + I+ F+ E+ +P++ L
Sbjct: 1178 KIKNLPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFL 1235
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F+K R L+ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1236 LENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKR 1283
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 27/184 (14%)
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
+V+ FYR +D + A D + ++YS D I V++ + ++ LK + +P
Sbjct: 970 KVRRFYRPDD-ISSTKAYSSDIREVYYSE-------DIISVPVVMIEGKCEVRLKDD-LP 1020
Query: 147 SSDFYFDME--YCVEY--STFRTLLTGKIHDLSLPSCTETVPTTATSTFFE--------- 193
+SD +E +C EY L ++ L + T VP + + +
Sbjct: 1021 NSDLPAVVEHVFCCEYLYDPANGALKQLPPNVRLVTLTRKVPASKKNKGKQICDIELGGS 1080
Query: 194 NMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHP 253
+ P G + LA LD+++GCGG+S GL LS +T+WA++ ++ A ++ NHP
Sbjct: 1081 DKPKDGQSENCLATLDIFAGCGGLSEGLQRSG-LS----LTKWAIEYEEPAGDAFGENHP 1135
Query: 254 EAQV 257
EA V
Sbjct: 1136 EAAV 1139
>gi|341868917|gb|AEK98582.1| chromomethyltransferase 2a2 [Vitis amurensis]
Length = 70
Score = 103 bits (256), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/69 (62%), Positives = 58/69 (84%)
Query: 436 ISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSR 495
ISG+NRFRN ++PL+D +N+Q+V+FMD+V +LKP++VLMENVV+I+KF LGRYAL R
Sbjct: 1 ISGFNRFRNKENPLEDPKNKQLVVFMDVVNYLKPRFVLMENVVNIVKFAGGYLGRYALGR 60
Query: 496 LVHMKYQAR 504
L+ M YQ R
Sbjct: 61 LIGMNYQTR 69
>gi|115455937|ref|NP_001051569.1| Os03g0798300 [Oryza sativa Japonica Group]
gi|113550040|dbj|BAF13483.1| Os03g0798300, partial [Oryza sativa Japonica Group]
Length = 413
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
K K LP+PG+V+ I GGPPCQG SG NRF SP + I+ F+ E+ +P++ L
Sbjct: 64 KIKNLPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFL 121
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F+K R L+ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 122 LENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKR 169
>gi|108711567|gb|ABF99362.1| expressed protein [Oryza sativa Japonica Group]
gi|215766031|dbj|BAG98259.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 376
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
K K LP+PG+V+ I GGPPCQG SG NRF SP + I+ F+ E+ +P++ L
Sbjct: 27 KIKNLPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFL 84
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F+K R L+ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 85 LENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKR 132
>gi|255553977|ref|XP_002518029.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
gi|223543011|gb|EEF44547.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
Length = 1542
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +PKY L+ENV
Sbjct: 1196 LPLPGQVDFINGGPPCQGFSGMNRFSQ--STWSKVQCEMILAFLSFADYFRPKYFLLENV 1253
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R AL+ L+ M YQ RFGI+ AG YG+ R R
Sbjct: 1254 RNFVSFNKGQTFRLALASLLEMGYQVRFGILEAGAYGVSHSRKR 1297
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 80/185 (43%), Gaps = 28/185 (15%)
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
+++ F R ED + E A D + ++Y+ + V+ I K V K N IP
Sbjct: 983 KIRRFSRPED-ISSEKAYCSDIREVYYTEETHLLSVETIEGKCEVR--------KKNDIP 1033
Query: 147 --SSDFYFDMEYCVE--YSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHK 202
S FD + E Y + L + L T T + A S + G +
Sbjct: 1034 PCGSAAIFDHIFFCEHLYDPSKGSLKQLPAHIKLRYSTGTQESDAASRKRKGKCKEGEDE 1093
Query: 203 AE----------LALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNH 252
E LA LD++SGCGG+S GL S T+WA++ ++ A E+ KLNH
Sbjct: 1094 VENKREATQGRRLATLDIFSGCGGLSEGLQQAGVSS-----TKWAIEYEEPAGEAFKLNH 1148
Query: 253 PEAQV 257
PE+ V
Sbjct: 1149 PESLV 1153
>gi|261414304|gb|ACX83570.1| DNA methyltransferase [Hieracium pilosella]
Length = 1569
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 64/106 (60%), Gaps = 2/106 (1%)
Query: 416 KILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLME 475
K LP PG VD I GGPPCQG SG NRF S + I+ F+ E+ +PKY L+E
Sbjct: 1216 KNLPRPGQVDFINGGPPCQGFSGMNRFNQ--STWSKAQCEMILAFLSFAEYFRPKYSLLE 1273
Query: 476 NVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
NV + + F+K R AL+ L+ M YQ RFGI+ AG +G+ Q R R
Sbjct: 1274 NVRNFVSFNKGQTFRLALASLLEMGYQVRFGILEAGAFGVSQSRKR 1319
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 7/52 (13%)
Query: 205 LALLDLYSGCGGMSTGLC-LGAKLSCTNLVTRWALDSDKSACESLKLNHPEA 255
L LD+++GCGG+S GL GA VT+WA++ ++ A ++ +LNHPEA
Sbjct: 1128 LKTLDIFAGCGGLSEGLTKAGAS------VTKWAIEYEEPAGDAFRLNHPEA 1173
>gi|233770212|gb|ACQ91179.1| Met1-type cytosine DNA-methyltransferase [Fragaria x ananassa]
Length = 1557
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +PKY L+ENV
Sbjct: 1206 LPLPGQVDFINGGPPCQGFSGMNRFNT--STWSKVQCEMILAFLSFADYFRPKYFLLENV 1263
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R L+ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1264 RNFVAFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVSQSRKR 1307
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
+V+ F+R ED + E A D + ++YS ++ PVD I K V + + ++
Sbjct: 993 KVRRFFRPED-ISVEKAYCSDVREVYYSEELHILPVDSIEGKCEVRRRSDLPECNAPALF 1051
Query: 147 SSDFYFDMEYCVEYSTFRTLLTG-KIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAE- 204
F+ + Y + + L ++ ++ TE+ E++P + +
Sbjct: 1052 QHIFFCEHLYDPSNGSLKQLPANIRVKYSTVGGDTESRKRKGKCKEGEDVPEVEQQRVDS 1111
Query: 205 ----LALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
LA LD+++GCGG+S GL A +S +T+WA++ ++ A ++ +LNHPE++V
Sbjct: 1112 EHMRLATLDIFAGCGGLSEGL-HQAGVS----ITKWAIEYEEPAGQAFQLNHPESKV 1163
>gi|233770210|gb|ACQ91178.1| Met1-type cytosine DNA-methyltransferase [Fragaria x ananassa]
Length = 1565
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +PKY L+ENV
Sbjct: 1214 LPLPGQVDFINGGPPCQGFSGMNRFNT--STWSKVQCEMILAFLSFADYFRPKYFLLENV 1271
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R L+ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1272 RNFVAFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVSQSRKR 1315
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
+V+ F+R ED + E A D + ++YS ++ PVD I K V + + ++
Sbjct: 1001 KVRRFFRPED-ISVEKAYCSDVREVYYSEELHILPVDSIEGKCEVRRRSDLPECNAPALF 1059
Query: 147 SSDFYFDMEYCVEYSTFRTLLTG-KIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAE- 204
F+ + Y + + L ++ ++ TE+ E++P + +
Sbjct: 1060 QHIFFCEHLYDPSNGSLKQLPANIRVKYSTVGGDTESRKRKGKCKEGEDVPEVEQQRVDS 1119
Query: 205 ----LALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
LA LD+++GCGG+S GL A +S +T+WA++ ++ A ++ +LNHPE++V
Sbjct: 1120 EHMRLATLDIFAGCGGLSEGL-HQAGVS----ITKWAIEYEEPAGQAFQLNHPESKV 1171
>gi|261414302|gb|ACX83569.1| DNA methyltransferase [Hieracium piloselloides]
Length = 1547
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 64/106 (60%), Gaps = 2/106 (1%)
Query: 416 KILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLME 475
K LP PG VD I GGPPCQG SG NRF S + I+ F+ E+ +PKY L+E
Sbjct: 1195 KNLPRPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFAEYFRPKYFLLE 1252
Query: 476 NVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
NV + + F+K R AL+ L+ M YQ RFGI+ AG +G+ Q R R
Sbjct: 1253 NVRNFVSFNKGQTFRLALASLLEMGYQVRFGILEAGAFGVSQSRKR 1298
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 7/52 (13%)
Query: 205 LALLDLYSGCGGMSTGLC-LGAKLSCTNLVTRWALDSDKSACESLKLNHPEA 255
L LD+++GCGG+S GL GA VT+WA++ ++ A ++ +LNHPEA
Sbjct: 1107 LKTLDIFAGCGGLSEGLTKAGAS------VTKWAIEYEEPAGDAFRLNHPEA 1152
>gi|224144433|ref|XP_002325288.1| DNA methyltransferase [Populus trichocarpa]
gi|222862163|gb|EEE99669.1| DNA methyltransferase [Populus trichocarpa]
Length = 1549
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +PKY L+ENV
Sbjct: 1202 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYFRPKYFLLENV 1259
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R ++ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1260 RNFVSFNKGQTFRLTIASLLQMGYQVRFGILEAGAYGVSQSRKR 1303
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 20/180 (11%)
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
+VQ F+R +D + E A D + ++YS + V+ I K ++ KI + + S P
Sbjct: 987 KVQRFFRPDD-ISPEKAYCSDIREIYYSEETHLLSVEVIEGK---CEVRKKIDIPTCSAP 1042
Query: 147 S---SDFYFDMEYCVEYSTFRTL---LTGKIHDLSLPSCTETVPTTATSTFFENMPNHGP 200
+ F+ + Y + + L + K +S + S EN
Sbjct: 1043 AIFDHTFFCEHMYDPSNGSLKQLPAHIKSKFSAVSKDGDVASRKRKGKSKEGENDTEDDK 1102
Query: 201 H-----KAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEA 255
+ LA LD+++GCGG+S GL A +S T+WA++ ++ A E+ KLNH E+
Sbjct: 1103 QLEASPEYRLATLDIFAGCGGLSEGL-QQAGVS----TTKWAIEYEEPAGEAFKLNHAES 1157
>gi|224077654|ref|XP_002305346.1| DNA methyltransferase [Populus trichocarpa]
gi|222848310|gb|EEE85857.1| DNA methyltransferase [Populus trichocarpa]
Length = 1529
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +PKY L+ENV
Sbjct: 1182 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYFRPKYFLLENV 1239
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R ++ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1240 RNFVSFNKGQTFRLTIASLLQMGYQVRFGILEAGAYGVSQSRKR 1283
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 5/48 (10%)
Query: 205 LALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNH 252
LA LD+++GCGG+S GL S T+WA++ ++ A E+ KLNH
Sbjct: 1092 LATLDIFAGCGGLSEGLQQAGVSS-----TKWAIEYEEPAGEAFKLNH 1134
>gi|411012963|gb|AFV99138.1| MET-type cytosine DNA-methyltransferase 1 [Malus x domestica]
Length = 1570
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +PKY L+ENV
Sbjct: 1221 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYFRPKYFLLENV 1278
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R ++ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1279 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGAYGVSQSRKR 1322
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 38/53 (71%), Gaps = 5/53 (9%)
Query: 205 LALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
LA LD+++GCGG+S GL A +S +T+WA++ ++ A ++ KLNHPE+ V
Sbjct: 1131 LATLDIFAGCGGLSEGL-RQAGIS----LTKWAIEYEEPAGDAFKLNHPESLV 1178
>gi|357119215|ref|XP_003561341.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Brachypodium
distachyon]
Length = 1542
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 416 KILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLME 475
K LP+PG+V+ I GGPPCQG SG NRF SP + I+ F+ E+ +P++ L+E
Sbjct: 1192 KNLPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLE 1249
Query: 476 NVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
NV + + F+K R A++ L+ M YQ RFGI+ AG +G+ Q R R
Sbjct: 1250 NVRNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGTFGVAQSRKR 1295
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 30/185 (16%)
Query: 88 VQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPS 147
V+ FYR +D + + A D + ++YS + + PVD I K V K I +
Sbjct: 982 VRRFYRPDD-ISSDKAYTSDIREVYYSEDIINVPVDMIEGKCDVR--------KKIDISN 1032
Query: 148 SDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNH--------- 198
SD +E+ +TG + L ++ A +N
Sbjct: 1033 SDLPVMVEHVFFCEHIYDPMTGALKQLPPNVKLTSMVQKAAGALKKNKGKQICENDQVDS 1092
Query: 199 -----GPHKAELALLDLYSGCGGMSTGLC-LGAKLSCTNLVTRWALDSDKSACESLKLNH 252
P + ++ LD+++GCGG+S GL GA T+WA++ ++ A E+ + NH
Sbjct: 1093 DKRKEVPKENRISTLDIFAGCGGLSEGLQQAGASF------TKWAIEYEEPAGEAFRQNH 1146
Query: 253 PEAQV 257
PEA V
Sbjct: 1147 PEAAV 1151
>gi|296084836|emb|CBI27718.3| unnamed protein product [Vitis vinifera]
Length = 1429
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +PK+ L+ENV
Sbjct: 1081 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYFRPKFFLLENV 1138
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R L+ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1139 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVSQSRKR 1182
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEA 255
H+ LA LD+++GCGG+S GL VT+WA++ ++ A ++ KLNHPE+
Sbjct: 987 HENRLATLDIFAGCGGLSEGLQQSGV-----SVTKWAIEYEEPAGDAFKLNHPES 1036
>gi|290999391|ref|XP_002682263.1| cytosine-5 DNA methyltransferase [Naegleria gruberi]
gi|284095890|gb|EFC49519.1| cytosine-5 DNA methyltransferase [Naegleria gruberi]
Length = 1527
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 78/135 (57%), Gaps = 4/135 (2%)
Query: 389 EDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSP 448
+D W +E + + I F+ + + +P P ++D+I GGPPCQG S NRF+ DS
Sbjct: 996 QDLWMDVEKMDSYRAEIVHFLSTKYAN--IPAPDEIDLIAGGPPCQGFSLLNRFKETDSS 1053
Query: 449 --LDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFG 506
L ++NR +++F+D V++ KPKYVL+ENV IL + + +L Y+A+F
Sbjct: 1054 KFLSHDKNRLVLVFLDYVKYFKPKYVLIENVTGILNTTVFDVPSAIIEKLDARGYEAKFS 1113
Query: 507 IIAAGCYGLPQFRLR 521
+ A +GLPQ R R
Sbjct: 1114 TVNAQHFGLPQTRTR 1128
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 108/255 (42%), Gaps = 32/255 (12%)
Query: 42 HYAQARIGECIFDLGDCAYIK----GEGTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDT 97
++ +I + +++GD Y+K +I + FF+ G+ RV+W R +D
Sbjct: 720 YFKSCKISKEEYNIGDFIYLKTPYLNHEMPYYICMVDSFFENWKGQRQMRVRWLRRYQDI 779
Query: 98 VMKEAADFH-----DRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDFYF 152
+ ++H D + L+ + +DN + I + V + + I S
Sbjct: 780 KILTTGEYHNVLCYDHQELYLTDEYDDNFIKNIKGRCAVFFVRKTEDFEK--IEGSRDKK 837
Query: 153 DMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTF--FEN----MPNHGPHKAELA 206
D+ YC + ++ G+ S E P TF EN + + K ++
Sbjct: 838 DIFYCKS----KIVIVGE-----QISLLELSPQEIELTFKCMENNLNAIKDQFIPKEKIT 888
Query: 207 LLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFL 266
LD++SGCGG+S G L + +++++ K A ++ + + AE+FL
Sbjct: 889 ALDIFSGCGGLSLG------LERAGIHVKYSIEFWKPAADTHHYYFKDCHTFCKNAEEFL 942
Query: 267 ELVKEWQKLCKRFAV 281
+ +K +L KRF +
Sbjct: 943 KHIKVANELKKRFGL 957
>gi|3132825|gb|AAC16389.1| putative cytosine-5 DNA methyltransferase [Zea mays]
Length = 1525
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP+PG+V+ I GGPPCQG SG NRF SP + I+ F+ E+ +P++ L+ENV
Sbjct: 1171 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1228
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R A++ L+ M YQ RFGI+ AG +G+ Q R R
Sbjct: 1229 RNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGVAQSRKR 1272
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 76/181 (41%), Gaps = 29/181 (16%)
Query: 91 FYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDF 150
FYR +D + A D + ++YS + D PVD I K V K N + SSD
Sbjct: 963 FYRPDD-ISSAKAYASDIREVYYSEDVIDVPVDMIEGKCEVR--------KKNDLASSDL 1013
Query: 151 YFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNH------------ 198
E+ +G + L P+ TS +N
Sbjct: 1014 PVMFEHVFFCELIYDRASGALKQLP-PNVRFMSMVQRTSALKKNKGKQICEPDQIDSGKW 1072
Query: 199 --GPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQ 256
P + LA LD+++GCGG+S GL A +S T+WA++ ++ A E+ NHPEA
Sbjct: 1073 LDVPKENRLATLDIFAGCGGLSEGL-QQAGVS----FTKWAIEYEEPAGEAFNKNHPEAV 1127
Query: 257 V 257
V
Sbjct: 1128 V 1128
>gi|343172220|gb|AEL98814.1| DNA (cytosine-5)-methyltransferase, partial [Silene latifolia]
Length = 264
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP PG VD I GGPPCQG SG NRF S + I+ F+ ++L+PKY L+ENV
Sbjct: 116 LPRPGQVDFINGGPPCQGFSGMNRFNK--SAWSKVQCEMILAFLSFADYLRPKYFLLENV 173
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R A++ L+ M YQ RFGI+ AG +G+ Q R R
Sbjct: 174 RNFVSFNKGQTFRLAIASLLEMGYQVRFGILDAGAFGVSQSRKR 217
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 193 ENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNH 252
EN+ + K +LA LD+++GCGG+S GL T+WA++ ++ A E+ LNH
Sbjct: 14 ENLDDKKSFKNQLATLDIFAGCGGLSEGLERSGVSQ-----TKWAIEYEEPAGEAFNLNH 68
Query: 253 PEAQV 257
PEA +
Sbjct: 69 PEASL 73
>gi|225463167|ref|XP_002267200.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
vinifera]
Length = 1549
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +PK+ L+ENV
Sbjct: 1201 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYFRPKFFLLENV 1258
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R L+ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1259 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAYGVSQSRKR 1302
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEA 255
H+ LA LD+++GCGG+S GL VT+WA++ ++ A ++ KLNHPE+
Sbjct: 1107 HENRLATLDIFAGCGGLSEGLQQSGV-----SVTKWAIEYEEPAGDAFKLNHPES 1156
>gi|414883787|tpg|DAA59801.1| TPA: cytosine-specific methyltransferase [Zea mays]
Length = 1536
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP+PG+V+ I GGPPCQG SG NRF SP + I+ F+ E+ +P++ L+ENV
Sbjct: 1182 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1239
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R A++ L+ M YQ RFGI+ AG +G+ Q R R
Sbjct: 1240 RNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGVAQSRKR 1283
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 76/181 (41%), Gaps = 29/181 (16%)
Query: 91 FYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDF 150
FYR +D + A D + ++YS + D PVD I K V K N + SSD
Sbjct: 974 FYRPDD-ISSAKAYASDIREVYYSEDVIDVPVDMIEGKCEVR--------KKNDLASSDL 1024
Query: 151 YFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNH------------ 198
E+ +G + L P+ TS +N
Sbjct: 1025 PVMFEHVFFCELIYDRASGALKQLP-PNVRFMSMVQRTSALKKNKGKQICEPDQIDSGKW 1083
Query: 199 --GPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQ 256
P + LA LD+++GCGG+S GL A +S T+WA++ ++ A E+ NHPEA
Sbjct: 1084 LDVPKENRLATLDIFAGCGGLSEGL-QQAGVS----FTKWAIEYEEPAGEAFNKNHPEAV 1138
Query: 257 V 257
V
Sbjct: 1139 V 1139
>gi|414883785|tpg|DAA59799.1| TPA: cytosine-specific methyltransferase [Zea mays]
Length = 1536
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP+PG+V+ I GGPPCQG SG NRF SP + I+ F+ E+ +P++ L+ENV
Sbjct: 1182 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1239
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R A++ L+ M YQ RFGI+ AG +G+ Q R R
Sbjct: 1240 RNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGVAQSRKR 1283
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 76/181 (41%), Gaps = 29/181 (16%)
Query: 91 FYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDF 150
FYR +D + A D + ++YS + D PVD I K V K N + SSD
Sbjct: 974 FYRPDD-ISSAKAYASDIREVYYSEDVIDVPVDMIEGKCEVR--------KKNDLASSDL 1024
Query: 151 YFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNH------------ 198
E+ +G + L P+ TS +N
Sbjct: 1025 PVMFEHVFFCELIYDRASGALKQLP-PNVRFMSMVQRTSALKKNKGKQICEPDQIDSGKW 1083
Query: 199 --GPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQ 256
P + LA LD+++GCGG+S GL A +S T+WA++ ++ A E+ NHPEA
Sbjct: 1084 LDVPKENRLATLDIFAGCGGLSEGL-QQAGVS----FTKWAIEYEEPAGEAFNKNHPEAV 1138
Query: 257 V 257
V
Sbjct: 1139 V 1139
>gi|242043138|ref|XP_002459440.1| hypothetical protein SORBIDRAFT_02g004680 [Sorghum bicolor]
gi|241922817|gb|EER95961.1| hypothetical protein SORBIDRAFT_02g004680 [Sorghum bicolor]
Length = 1397
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP+PG+V+ I GGPPCQG SG NRF SP + I+ F+ E+ +P++ L+ENV
Sbjct: 1042 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1099
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R A++ L+ M YQ RFGI+ AG +G+ Q R R
Sbjct: 1100 RNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGVAQSRKR 1143
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 77/184 (41%), Gaps = 34/184 (18%)
Query: 91 FYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDF 150
FYR +D + A D + ++YS + D PVD I K V K N + SSD
Sbjct: 833 FYRPDD-ISTAKAYASDIREVYYSEDVIDVPVDMIEGKCEVR--------KKNDLASSDL 883
Query: 151 YFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHG----------- 199
E+ +G + LP + +T + N G
Sbjct: 884 PVMFEHVFFCELIYDRASGALK--QLPPNVRFMSMVQKATI-ASKKNKGKQICETDQIDS 940
Query: 200 ------PHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHP 253
P + LA LD+++GCGG+S GL A +S T+WA++ ++ A E+ NHP
Sbjct: 941 GKWLDVPKENRLATLDIFAGCGGLSEGL-QQAGVS----FTKWAIEYEEPAGEAFSKNHP 995
Query: 254 EAQV 257
EA V
Sbjct: 996 EAVV 999
>gi|162463699|ref|NP_001105186.1| DNA methyl transferase1 [Zea mays]
gi|20977598|gb|AAM28226.1| DNA methyltransferase 101 [Zea mays]
Length = 1457
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP+PG+V+ I GGPPCQG SG NRF SP + I+ F+ E+ +P++ L+ENV
Sbjct: 1103 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1160
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R A++ L+ M YQ RFGI+ AG +G+ Q R R
Sbjct: 1161 RNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGVAQSRKR 1204
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 76/181 (41%), Gaps = 29/181 (16%)
Query: 91 FYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDF 150
FYR +D + A D + ++YS + D PVD I K V K N + SSD
Sbjct: 895 FYRPDD-ISSAKAYASDIREVYYSEDVIDVPVDMIEGKCEVR--------KKNDLASSDL 945
Query: 151 YFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNH------------ 198
E+ +G + L P+ TS +N
Sbjct: 946 PVMFEHVFFCELIYDRASGALKQLP-PNVRFMSMVQRTSALKKNKGKQICEPDQIDSGKW 1004
Query: 199 --GPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQ 256
P + LA LD+++GCGG+S GL A +S T+WA++ ++ A E+ NHPEA
Sbjct: 1005 LDVPKENRLATLDIFAGCGGLSEGL-QQAGVS----FTKWAIEYEEPAGEAFNKNHPEAV 1059
Query: 257 V 257
V
Sbjct: 1060 V 1060
>gi|345482937|ref|XP_001600175.2| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI [Nasonia
vitripennis]
Length = 1404
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 72/118 (61%), Gaps = 5/118 (4%)
Query: 407 EFVRNGFKS---KILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDI 463
E V NG S + LP G+VD++CGGPPCQG SG NRF + +N IV F+
Sbjct: 987 EKVINGETSLGGQSLPKKGEVDLLCGGPPCQGFSGMNRFNS--RAYSSFKNSLIVSFISF 1044
Query: 464 VEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ KP++ LMENV + + F K+++ + LS L M YQ FGI+ AG YG+PQ R R
Sbjct: 1045 CDYYKPRFFLMENVRNFVSFKKSAVLKLTLSCLSRMGYQCTFGILQAGSYGIPQTRRR 1102
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 25/216 (11%)
Query: 70 IGKILEFFKTTDGE------EYFRVQWFYRAEDTVMKEA-ADFHDRKRLFYSTVMNDNPV 122
IG I + T+ + Y V+ YR E+T E+ D L++S D +
Sbjct: 783 IGYITSIYSTSKSKLLAGVNAYVTVKKMYRPENTHRGESLKKKSDMNMLYWSDEECDVRL 842
Query: 123 DCIISKVIVA---QIPPKIGLKSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSC 179
+CI+ K +A + I S S P FYF Y + + H S+
Sbjct: 843 NCIVGKCYIAYSENLNQSIEEWSASGPHR-FYFSEAYDLNNEEY---TEPPAHACSVTKS 898
Query: 180 -----TETVPTTATSTFFENMPNHGPHKA-ELALLDLYSGCGGMSTGLCLGAKLSCTNLV 233
+ T E++P P + +L LD+++GCGG+S GL
Sbjct: 899 FKKDVKAKSKSKKVETIIEDIPVSLPQISHKLRTLDVFAGCGGLSEGLKQAGVAE----- 953
Query: 234 TRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELV 269
+ WA+++D +A + +LN+P+A V FLE V
Sbjct: 954 SLWAIENDTAAAHAYRLNNPKASVFTTDCNSFLEKV 989
>gi|68655480|emb|CAJ01710.1| putative cytosine-5 DNA methyltransferase [Hordeum vulgare subsp.
vulgare]
Length = 251
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 416 KILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLME 475
K LP+PG+V+ I GGPPCQG SG NRF SP + I+ F+ E+ +P++ L+E
Sbjct: 55 KNLPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLE 112
Query: 476 NVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
NV + + F+K R A++ L+ M YQ RFGI+ AG +G+ Q R R
Sbjct: 113 NVRNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGTFGVAQSRKR 158
>gi|208964726|gb|ACI31553.1| MET1 [Nicotiana benthamiana]
Length = 227
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +PKY L+ENV
Sbjct: 108 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYYRPKYFLLENV 165
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F++ R ++ L+ M YQ RFGI+ AG +G+PQ R R
Sbjct: 166 RNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAFGVPQSRKR 209
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 197 NHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQ 256
N + LA LD+++GCGG+S GL + ++ T+WA++ ++ A ++ KLNHPEA+
Sbjct: 10 NETSQQNRLATLDIFAGCGGLSEGL---QRSGVSD--TKWAIEYEEPAGDAFKLNHPEAE 64
Query: 257 VRNEAAEDFLELVKE 271
V + FL V +
Sbjct: 65 VFIQNCNVFLRAVMQ 79
>gi|350536241|ref|NP_001234748.1| DNA (cytosine-5)-methyltransferase [Solanum lycopersicum]
gi|2887280|emb|CAA05207.1| DNA (cytosine-5)-methyltransferase [Solanum lycopersicum]
Length = 1559
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +PK+ L+ENV
Sbjct: 1211 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYYRPKFFLLENV 1268
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F++ R ++ L+ M YQ RFGI+ AG YG+PQ R R
Sbjct: 1269 RNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAYGVPQSRKR 1312
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 31/186 (16%)
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
+V+ F+R ED + + A D + ++YS ++ PV+ I K ++ K + S +P
Sbjct: 999 KVRRFFRPED-ISSDKAYSSDIREIYYSEDIHTVPVEIIKGK---CEVRKKYDISSEDVP 1054
Query: 147 SSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTT-----ATSTFFENMPNHGPH 201
+ FD + EY L G + LP+ + + ATS + G
Sbjct: 1055 A---MFDHIFFCEY--LYDPLNGSLK--KLPAQINLILSKIKLDDATSRKRKGKGKEGVD 1107
Query: 202 KA----------ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLN 251
+ L+ LD+++GCGG+S GL T WA++ + A ++ +LN
Sbjct: 1108 EVGELNETSPQNRLSTLDIFAGCGGLSEGLQHSGVTD-----TNWAIEYEAPAGDAFRLN 1162
Query: 252 HPEAQV 257
HP+ +V
Sbjct: 1163 HPKTKV 1168
>gi|357498929|ref|XP_003619753.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355494768|gb|AES75971.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 1573
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +P+Y L+ENV
Sbjct: 1226 LPLPGQVDFINGGPPCQGFSGMNRFNT--STWSKVQCEMILAFLSFADYFRPRYFLLENV 1283
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R L+ L+ M YQ RFGI+ AG +G+ Q R R
Sbjct: 1284 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKR 1327
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 205 LALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
LA LD+++GCGG+S GL S T+WA++ ++ A + K NHPEA V
Sbjct: 1136 LATLDIFAGCGGLSEGLHQSGVSS-----TKWAIEYEEPAGNAFKANHPEALV 1183
>gi|10257413|gb|AAG15406.1| cytosine-5 DNA methyltransferase MET1 [Zea mays]
Length = 784
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP+PG+V+ I GGPPCQG SG NRF SP + I+ F+ E+ +P++ L+ENV
Sbjct: 430 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 487
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R A++ L+ M YQ RFGI+ AG +G+ Q R R
Sbjct: 488 RNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGVAQSRKR 531
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 76/181 (41%), Gaps = 29/181 (16%)
Query: 91 FYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDF 150
FYR +D + A D + ++YS + D PVD I K V K N + SSD
Sbjct: 222 FYRPDD-ISSAKAYASDIREVYYSEDVIDVPVDMIEGKCEVR--------KKNDLASSDL 272
Query: 151 YFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNH------------ 198
E+ +G + L P+ TS +N
Sbjct: 273 PVMFEHVFFCELIYDRASGALKQLP-PNVRFMSMVQRTSALKKNKGKQICEPDQIDSGKW 331
Query: 199 --GPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQ 256
P + LA LD+++GCGG+S GL A +S T+WA++ ++ A E+ NHPEA
Sbjct: 332 LDVPKENRLATLDIFAGCGGLSEGL-QQAGVS----FTKWAIEYEEPAGEAFNKNHPEAV 386
Query: 257 V 257
V
Sbjct: 387 V 387
>gi|147790936|emb|CAN77234.1| hypothetical protein VITISV_010061 [Vitis vinifera]
Length = 3216
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 59/73 (80%)
Query: 98 VMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDFYFDMEYC 157
VMKE A HD+KR+F ST+MNDN +DCIISKV V ++ P++ LK +SIP D+Y+DM+Y
Sbjct: 3121 VMKEEAASHDKKRIFCSTIMNDNSLDCIISKVNVLELTPRVSLKLDSIPPFDYYYDMKYN 3180
Query: 158 VEYSTFRTLLTGK 170
VEYSTF TLL+GK
Sbjct: 3181 VEYSTFHTLLSGK 3193
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 34/44 (77%)
Query: 19 FLNFLHGAYSDDDEDKIVSNVECHYAQARIGECIFDLGDCAYIK 62
F F+ +DD+E++IV+NVECHY QA++ IF+LGDCA+IK
Sbjct: 2984 FETFVVSQSADDNEEEIVTNVECHYTQAKLDGTIFNLGDCAHIK 3027
>gi|357470695|ref|XP_003605632.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355506687|gb|AES87829.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 1641
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +P+Y L+ENV
Sbjct: 1136 LPLPGQVDFINGGPPCQGFSGMNRFNT--STWSKVQCEMILAFLSFADYFRPRYFLLENV 1193
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R L+ L+ M YQ RFGI+ AG +G+ Q R R
Sbjct: 1194 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKR 1237
>gi|2654108|gb|AAC49931.1| cytosine-5 DNA methyltransferase [Pisum sativum]
Length = 1554
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +P+Y L+ENV
Sbjct: 1207 LPLPGQVDFINGGPPCQGFSGMNRFNT--STWSKVQCEMILAFLSFADYFRPRYFLLENV 1264
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R L+ L+ M YQ RFGI+ AG +G+ Q R R
Sbjct: 1265 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKR 1308
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 37/191 (19%)
Query: 86 FRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSI 145
+V+ F+R ED V E A D + +++S V + K ++ KI + S
Sbjct: 992 LKVRRFFRPED-VSSEKAYCSDVQEVYFSDETYTISVQSVEGKC---EVRKKIDIPEGSA 1047
Query: 146 PSS---DFYFDMEYCVEYSTFRTLLTG-KIHDLSLPS-----------CTE----TVPTT 186
P + F+ ++ Y + + L + K+ S P+ C E +VP
Sbjct: 1048 PGAFHNVFFCELLYDPATGSLKKLPSHIKVKYSSGPTADNAARKKKGKCKEGDSISVPDI 1107
Query: 187 ATSTFFENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACE 246
+ T EN LA LD+++GCG +S GL S T+WA++ ++ A
Sbjct: 1108 KSKTSNEN---------RLATLDIFAGCGALSEGLHKSGASS-----TKWAIEYEEPAGN 1153
Query: 247 SLKLNHPEAQV 257
+ K NHPEA V
Sbjct: 1154 AFKANHPEALV 1164
>gi|219885163|gb|ACL52956.1| unknown [Zea mays]
Length = 385
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP+PG+V+ I GGPPCQG SG NRF SP + I+ F+ E+ +P++ L+ENV
Sbjct: 31 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 88
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R A++ L+ M YQ RFGI+ AG +G+ Q R R
Sbjct: 89 RNFVSFNKGQTFRLAVASLLEMGYQVRFGILEAGAFGVAQSRKR 132
>gi|385139885|gb|AFI41915.1| Met1-type cytosine DNA-methyltransferase, partial [Betula
platyphylla]
Length = 169
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +PKY L+ENV
Sbjct: 42 LPLPGQVDFINGGPPCQGFSGMNRFN--QSTWSKVQCEMILAFLSFADYFRPKYFLLENV 99
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R L+ L+ M YQ RFGI+ AG +G+ Q R R
Sbjct: 100 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKR 143
>gi|116062014|dbj|BAF34635.1| DNA methyltransferase 1a [Brassica rapa]
Length = 1528
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +P+Y L
Sbjct: 1174 QKRTLPLPGQVDFINGGPPCQGFSGMNRFNQ--SSWSKVQCEMILAFLSFADYFRPRYFL 1231
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + F+K + L+ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1232 LENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQSRKR 1279
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 194 NMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHP 253
+ P + LA LD+++GCGG+S GL A +S T+WA++ ++ A ++ + NHP
Sbjct: 1077 DKPEEVSKETRLATLDIFAGCGGLSQGL-EQAGVSA----TKWAIEYEEPAGKAFRKNHP 1131
Query: 254 EAQV 257
E V
Sbjct: 1132 ETTV 1135
>gi|357477891|ref|XP_003609231.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355510286|gb|AES91428.1| Cytosine-specific methyltransferase [Medicago truncatula]
Length = 569
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Query: 63 GEGTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPV 122
G I+E F++ D E YF QWFYRAEDTV+K+ + D+KR+F S V ++NP+
Sbjct: 38 GTSLCSTFSTIVELFESHDKEYYFTAQWFYRAEDTVIKDHGNLFDKKRIFKSDVKDENPL 97
Query: 123 DCIISKVIVAQIPPKI-GLKSNSIPSSDFYFDMEYCVEYSTFRTL 166
DC++ KV + +I P K IP S+FYFDM+Y V Y TF +
Sbjct: 98 DCLVKKVGIVRISPDASAAKKKKIPPSEFYFDMKYTVPYLTFSNI 142
>gi|343172218|gb|AEL98813.1| DNA (cytosine-5)-methyltransferase, partial [Silene latifolia]
Length = 264
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP PG VD I GGPPCQG SG NRF S + I+ F+ ++ +PKY L+ENV
Sbjct: 116 LPRPGQVDFINGGPPCQGFSGMNRFNK--SAWSKVQCEMILAFLSFADYFRPKYFLLENV 173
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R A++ L+ M YQ RFGI+ AG +G+ Q R R
Sbjct: 174 RNFVSFNKGQTFRLAIASLLEMGYQVRFGILDAGAFGVSQSRKR 217
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 193 ENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNH 252
EN+ + K +LA LD+++GCGG+S GL T+WA++ ++ A E+ LNH
Sbjct: 14 ENLDDKKSFKNQLATLDIFAGCGGLSEGLERSGVSQ-----TKWAIEYEEPAGEAFNLNH 68
Query: 253 PEAQV 257
PEA V
Sbjct: 69 PEASV 73
>gi|169977306|emb|CAQ18900.1| DNA (cytosine-5) methyltransferase [Nicotiana sylvestris]
Length = 1558
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +PK+ L+ENV
Sbjct: 1210 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYYRPKFFLLENV 1267
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F++ R ++ L+ M YQ RFGI+ AG +G+PQ R R
Sbjct: 1268 RNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAFGVPQSRKR 1311
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 29/200 (14%)
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
+V+ F+R ED + + A D + ++YS ++ PV+ I K ++ K + S +P
Sbjct: 996 KVRRFFRPED-ISSDKAYSSDIREIYYSEEIHTVPVETIEGK---CEVRKKYDIPSEDVP 1051
Query: 147 SSDFYFDMEYCVEYSTFRTLLTGKIHDL---------------SLPSCTETVPTTATSTF 191
+ FD + EY F L G + L + +
Sbjct: 1052 A---IFDHVFFCEY--FYDPLNGSLKQLPAQVKLRFSRVKLDDAASRKRKGKGKEGEDEL 1106
Query: 192 FENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLN 251
N + LA LD+++GCGG+S GL T+WA++ ++ A ++ KLN
Sbjct: 1107 RVGQLNEASQQNRLATLDIFAGCGGLSEGLQRSGVSD-----TKWAIEYEEPAGDAFKLN 1161
Query: 252 HPEAQVRNEAAEDFLELVKE 271
HPEA+V + FL +V +
Sbjct: 1162 HPEAKVFIQNCNVFLRVVMQ 1181
>gi|297804976|ref|XP_002870372.1| hypothetical protein ARALYDRAFT_355455 [Arabidopsis lyrata subsp.
lyrata]
gi|297316208|gb|EFH46631.1| hypothetical protein ARALYDRAFT_355455 [Arabidopsis lyrata subsp.
lyrata]
Length = 1496
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ ILPLPG VD I GGPPCQG SG NRF D + I+ F+ ++ +PKY L
Sbjct: 1131 QKSILPLPGQVDFINGGPPCQGFSGMNRFS--DRSWSKVQCEMILAFLSFADYFRPKYFL 1188
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + F+K + ++ L+ M YQ RFG++ AG YG+ Q R R
Sbjct: 1189 LENVKKFVTFNKGRTFQLTVASLLEMGYQVRFGLLEAGAYGISQPRKR 1236
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 186 TATSTFFENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSAC 245
+ T + P+ P + LA LD+++GCGG+S GL K ++ T+WA++ ++ A
Sbjct: 1026 SETDSVMSVKPDEVPKEMRLATLDIFAGCGGLSYGL---EKAGVSD--TKWAIEYEEPAA 1080
Query: 246 ESLKLNHPEAQV 257
++ K NHP+ V
Sbjct: 1081 QAFKQNHPKTTV 1092
>gi|171196104|dbj|BAG15930.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
Length = 1486
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP+PG+V+ I GGPPCQG SG NRF SP + I+ F+ E+ +P++ L+ENV
Sbjct: 1140 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1197
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R ++ L+ M YQ RFGI+ AG +G+ Q R R
Sbjct: 1198 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQSRKR 1241
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 88 VQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPS 147
V+ FYR +D + A D + ++YS + PVD I K ++ KI + ++ +P
Sbjct: 928 VRRFYRPDD-ISSAKAYVSDIREVYYSENIVKVPVDMIEGK---CEVKKKIDISNSDVP- 982
Query: 148 SDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNH--------- 198
+ E+ E+ F TG + L +V AT +N
Sbjct: 983 --VMVEHEFFCEH--FYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDS 1038
Query: 199 -----GPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHP 253
+ LA LD+++GCGG+S GL A +S T+WA++ ++ A E+ NHP
Sbjct: 1039 DKCTKVSKENRLATLDIFAGCGGLSEGL-QQAGVS----FTKWAIEYEEPAGEAFTKNHP 1093
Query: 254 EAQV 257
EA V
Sbjct: 1094 EAAV 1097
>gi|7288140|dbj|BAA92852.1| DNA (cytosine-5-)-methyltransferase [Nicotiana tabacum]
gi|56130955|gb|AAV80209.1| cytosine-5-methyltransferase [Nicotiana tabacum]
Length = 1556
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +PK+ L+ENV
Sbjct: 1208 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYYRPKFFLLENV 1265
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F++ R ++ L+ M YQ RFGI+ AG +G+PQ R R
Sbjct: 1266 RNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAFGVPQSRKR 1309
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 29/186 (15%)
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
+V+ F+R ED + + A D + ++YS ++ PV+ I K ++ K + S +P
Sbjct: 994 KVRRFFRPED-ISSDKAYSSDIREIYYSEEIHTVPVETIEGK---CEVRKKYDIPSEDVP 1049
Query: 147 SSDFYFDMEYCVEYSTFRTLLTGKIHDL---------------SLPSCTETVPTTATSTF 191
++ FD + EY L G + L + +
Sbjct: 1050 AT---FDHVFFCEY--LYDPLNGSLKQLPAQVKLRFSRVKLDDAASRKRKGKGKEGEDEL 1104
Query: 192 FENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLN 251
N + LA LD+++GCGG+S GL T+WA++ ++ A ++ KLN
Sbjct: 1105 RVGQLNVASQQNRLATLDIFAGCGGLSEGLQRSGVSD-----TKWAIEYEEPAGDAFKLN 1159
Query: 252 HPEAQV 257
HPEA+V
Sbjct: 1160 HPEAKV 1165
>gi|340373134|ref|XP_003385097.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Amphimedon
queenslandica]
Length = 1444
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 72/117 (61%), Gaps = 2/117 (1%)
Query: 405 IKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ E + + ++LP GDV+++CGGPPCQG SG NRF + + +N ++ ++
Sbjct: 1043 VMEGAKTNSRGQLLPQKGDVELLCGGPPCQGFSGMNRFNSRE--YSQFKNSLVISYLSFC 1100
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
E+ +P++ L+ENV + + F K+ + + L LV M YQ FG++ AG YG+PQ R R
Sbjct: 1101 EYYRPRFFLLENVRNFVSFKKSMVLKLTLRCLVKMGYQCTFGVLQAGQYGVPQTRRR 1157
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 102/247 (41%), Gaps = 35/247 (14%)
Query: 60 YIKGEGTQK----HIGKILEFFKTTDGEE--------YFRVQWFYRAEDTVM-KEAADFH 106
Y+KG IG++LE F + G + + +++ +YR +DT EA +
Sbjct: 813 YVKGSNIDSPSPFQIGQVLEIFSKSLGGKLIDNNKIVHIKLRMYYRPQDTHKGDEATAQY 872
Query: 107 DRKRLFYSTVMNDNPV-DCIISKVIVA---QIPPKIGLKSNSIPSSDFYFDMEYCVEYST 162
D L++S ++ D + K V I I ++ P+ FYF YC +
Sbjct: 873 DLNLLYWSDLVTTVVAGDVVCGKCFVKFKEDITEDIDSYFSNKPNH-FYFVEAYCADTKE 931
Query: 163 FRTLLTGKIHDLSLPS----------CTETVPTTATSTFFENMPNHGPHKAELALLDLYS 212
F ++ E++ TT+T ++ +L +LD+++
Sbjct: 932 FEDPPVHAMNKGKGKGKGKGKGPAKGSKESIATTSTDDDKKDEITPDSSFKKLRMLDVFA 991
Query: 213 GCGGMSTGL-CLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKE 271
GCGG+S G G SC WA++ D+ A ++ +LN+ + V + L LV E
Sbjct: 992 GCGGLSEGFHQAGVADSC------WAVEIDEPAAQAFRLNNSQTTVFTDDCNILLSLVME 1045
Query: 272 WQKLCKR 278
K R
Sbjct: 1046 GAKTNSR 1052
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 69 HIGKILEFFKTTDGEEYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISK 128
++ +I+ ++ ++G++ F WF+R+ DTV+ E D + LF DNP+ I+ K
Sbjct: 590 YLTRIMSMYEDSNGKKMFHGWWFHRSTDTVLGETG---DPRELFLIDDCEDNPLGAIMDK 646
Query: 129 VIVAQIPP 136
V V PP
Sbjct: 647 VEVEYKPP 654
>gi|37201980|tpg|DAA01513.1| TPA_exp: putative cytosine-5 DNA methyltransferase [Oryza sativa
(japonica cultivar-group)]
Length = 1497
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP+PG+V+ I GGPPCQG SG NRF SP + I+ F+ E+ +P++ L+ENV
Sbjct: 1151 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1208
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R ++ L+ M YQ RFGI+ AG +G+ Q R R
Sbjct: 1209 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQSRKR 1252
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 88 VQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPS 147
V+ FYR +D + A D + ++YS + PVD I K ++ KI + ++ +P
Sbjct: 939 VRRFYRPDD-ISSAKAYVSDIREVYYSENIVKVPVDMIEGK---CEVKKKIDISNSDVP- 993
Query: 148 SDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNH--------- 198
+ E+ E+ F TG + L +V AT +N
Sbjct: 994 --VMVEHEFFCEH--FYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDS 1049
Query: 199 -----GPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHP 253
+ LA LD+++GCGG+S GL A +S T+WA++ ++ A E+ NHP
Sbjct: 1050 DKCTKVSKENRLATLDIFAGCGGLSEGL-QQAGVS----FTKWAIEYEEPAGEAFTKNHP 1104
Query: 254 EAQV 257
EA V
Sbjct: 1105 EAAV 1108
>gi|257096314|sp|B1Q3J6.1|DNM1B_ORYSJ RecName: Full=DNA (cytosine-5)-methyltransferase 1B; Short=OsMET1b;
AltName: Full=DNA methyltransferase 1-2; Short=OsMET1-2
gi|171196103|dbj|BAG15929.1| putative cytosine-5 DNA methyltransferase [Oryza sativa Japonica
Group]
Length = 1529
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP+PG+V+ I GGPPCQG SG NRF SP + I+ F+ E+ +P++ L+ENV
Sbjct: 1183 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1240
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R ++ L+ M YQ RFGI+ AG +G+ Q R R
Sbjct: 1241 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQSRKR 1284
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 88 VQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPS 147
V+ FYR +D + A D + ++YS + PVD I K ++ KI + ++ +P
Sbjct: 971 VRRFYRPDD-ISSAKAYVSDIREVYYSENIVKVPVDMIEGK---CEVKKKIDISNSDVP- 1025
Query: 148 SDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNH--------- 198
+ E+ E+ F TG + L +V AT +N
Sbjct: 1026 --VMVEHEFFCEH--FYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDS 1081
Query: 199 -----GPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHP 253
+ LA LD+++GCGG+S GL A +S T+WA++ ++ A E+ NHP
Sbjct: 1082 DKCTKVSKENRLATLDIFAGCGGLSEGL-QQAGVS----FTKWAIEYEEPAGEAFTKNHP 1136
Query: 254 EAQV 257
EA V
Sbjct: 1137 EAAV 1140
>gi|359486204|ref|XP_002268238.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
vinifera]
Length = 1238
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP PG VD I GGPPCQG SG NRF + I+ F+ ++ +P++ L+ENV
Sbjct: 893 LPRPGQVDFINGGPPCQGFSGMNRFNQ--GKWSKMQCEMILAFLSFADYFRPRFFLLENV 950
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R L+ L+ M YQ RFG++ AG YG+PQ R R
Sbjct: 951 RNFVTFNKGQTFRLTLASLLEMGYQVRFGVLEAGAYGVPQSRRR 994
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 14/187 (7%)
Query: 72 KILEFFKTTDGEEY-FRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVI 130
K+ + FK D E +V+ F+R ED + E A D + ++YST + PV I K
Sbjct: 673 KLSKSFKLADPESTKLKVRRFFRPED-ISAEKAHLSDIREVYYSTQIVVVPVMAIEGKCE 731
Query: 131 VAQIPPKIGLKSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATST 190
V + K L + + P+ + + +C T K+ S +E + T +
Sbjct: 732 VRK---KHELPAFNAPAE--FQHIFFCQSQYDPDTRAIKKLPARLKLSSSENMDTDEAAC 786
Query: 191 FFENMPNHGPH--KAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESL 248
G K+ LA LD+++GCGG+S GL A +S +T+WA++ ++ A E+
Sbjct: 787 RKRTSECKGGECDKSRLATLDVFAGCGGLSEGL-QQAGVS----LTKWAIEYEEPAGEAF 841
Query: 249 KLNHPEA 255
LNHP+A
Sbjct: 842 HLNHPDA 848
>gi|222636555|gb|EEE66687.1| hypothetical protein OsJ_23341 [Oryza sativa Japonica Group]
Length = 1555
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP+PG+V+ I GGPPCQG SG NRF SP + I+ F+ E+ +P++ L+ENV
Sbjct: 1209 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1266
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R ++ L+ M YQ RFGI+ AG +G+ Q R R
Sbjct: 1267 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQSRKR 1310
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 88 VQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPS 147
V+ FYR +D + A D + ++YS + PVD I K ++ KI + ++ +P
Sbjct: 997 VRRFYRPDD-ISSAKAYVSDIREVYYSENIVKVPVDMIEGK---CEVKKKIDISNSDVP- 1051
Query: 148 SDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNH--------- 198
+ E+ E+ F TG + L +V AT +N
Sbjct: 1052 --VMVEHEFFCEH--FYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDS 1107
Query: 199 -----GPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHP 253
+ LA LD+++GCGG+S GL A +S T+WA++ ++ A E+ NHP
Sbjct: 1108 DKCTKVSKENRLATLDIFAGCGGLSEGL-QQAGVS----FTKWAIEYEEPAGEAFTKNHP 1162
Query: 254 EAQV 257
EA V
Sbjct: 1163 EAAV 1166
>gi|117307345|dbj|BAF36443.1| DNA methyltransferase type 1 [Nicotiana tabacum]
Length = 1558
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +PK+ L+ENV
Sbjct: 1210 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYYRPKFFLLENV 1267
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F++ R ++ L+ M YQ RFGI+ AG +G+PQ R R
Sbjct: 1268 RNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAFGVPQSRKR 1311
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 44/258 (17%)
Query: 22 FLHGAYSDDDEDKIVSNVECHYAQARIGECIF----DLGDCAYIKGEGTQKHIGKILEFF 77
+L YS DD I + H+A R G F ++G AY+ + ++LE F
Sbjct: 932 YLGTEYSIDDFVYIHPD---HFAVERGGSGTFKAGRNVGLMAYV--------VCQLLEIF 980
Query: 78 KTTDGEEY------FRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIV 131
++ +V+ F+R ED + + A D + ++YS ++ PV+ I K
Sbjct: 981 GPKGSKQAKVDSTNVKVRRFFRPED-ISSDKAYSSDIREIYYSEEIHTVPVETIEGK--- 1036
Query: 132 AQIPPKIGLKSNSIPSS-DFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTAT-- 188
++ K + S +P++ D F EY Y L + L + A+
Sbjct: 1037 CEVRKKYDIPSEDVPATFDHVFFCEYL--YDPLNGSLKQLPAQVKLRFSRVKLDDAASRK 1094
Query: 189 ---------STFFENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALD 239
N + LA LD+++GCGG+S GL T+WA++
Sbjct: 1095 RKGKGKEGEDELRVGQLNVASQQNRLATLDIFAGCGGLSEGLQRSGVSD-----TKWAIE 1149
Query: 240 SDKSACESLKLNHPEAQV 257
++ A ++ KLNHPEA+V
Sbjct: 1150 YEEPAGDAFKLNHPEAKV 1167
>gi|359480931|ref|XP_002267284.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Vitis
vinifera]
Length = 1530
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +P++ L+ENV
Sbjct: 1187 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYFRPRFFLLENV 1244
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R ++ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1245 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGAYGVSQSRKR 1288
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 80/196 (40%), Gaps = 48/196 (24%)
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
+++ F+R ED + E A D + +FYS + PV+ I K V Q + +P
Sbjct: 972 KLRRFFRPED-ISAEKAYTSDIREVFYSEETHFVPVEMIEGKCEVIQ--------KHDLP 1022
Query: 147 SSDFYFDMEYCVEYSTFRTLLTGKIHDLSLP-----SCTETVPTTAT------------- 188
S D E+ G + L + S + V AT
Sbjct: 1023 SCDVLATFEHIFFCEHLFEPSKGSLKQLPVHIKMRYSARKAVDDAATRKRKGKGKVGEDD 1082
Query: 189 -------STFFENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSD 241
+ F EN LA LD+++GCGG+S GL VT+WA++ +
Sbjct: 1083 LKVERQKTAFQENC---------LATLDIFAGCGGLSEGLQQSGVS-----VTKWAIEYE 1128
Query: 242 KSACESLKLNHPEAQV 257
+ A ++ KLNHPE+ +
Sbjct: 1129 EPAGDAFKLNHPESSM 1144
>gi|218199194|gb|EEC81621.1| hypothetical protein OsI_25142 [Oryza sativa Indica Group]
Length = 1538
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP+PG+V+ I GGPPCQG SG NRF SP + I+ F+ E+ +P++ L+ENV
Sbjct: 1192 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1249
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R ++ L+ M YQ RFGI+ AG +G+ Q R R
Sbjct: 1250 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQSRKR 1293
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 88 VQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPS 147
V+ FYR +D + A D + ++YS + PVD I K ++ KI + ++ +P
Sbjct: 980 VRRFYRPDD-ISSAKAYVSDIREVYYSENIVKVPVDMIEGK---CEVKKKIDISNSDVP- 1034
Query: 148 SDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNH--------- 198
+ E+ E+ F TG + L +V AT +N
Sbjct: 1035 --VMVEHEFFCEH--FYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDS 1090
Query: 199 -----GPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHP 253
+ LA LD+++GCGG+S GL A +S T+WA++ ++ A E+ NHP
Sbjct: 1091 DKCTKVSKENRLATLDIFAGCGGLSQGL-QQAGVS----FTKWAIEYEEPAGEAFTKNHP 1145
Query: 254 EAQV 257
EA V
Sbjct: 1146 EAAV 1149
>gi|296084835|emb|CBI27717.3| unnamed protein product [Vitis vinifera]
Length = 1417
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +P++ L+ENV
Sbjct: 1074 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYFRPRFFLLENV 1131
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R ++ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1132 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGAYGVSQSRKR 1175
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 80/196 (40%), Gaps = 48/196 (24%)
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
+++ F+R ED + E A D + +FYS + PV+ I K V Q + +P
Sbjct: 859 KLRRFFRPED-ISAEKAYTSDIREVFYSEETHFVPVEMIEGKCEVIQ--------KHDLP 909
Query: 147 SSDFYFDMEYCVEYSTFRTLLTGKIHDLSLP-----SCTETVPTTAT------------- 188
S D E+ G + L + S + V AT
Sbjct: 910 SCDVLATFEHIFFCEHLFEPSKGSLKQLPVHIKMRYSARKAVDDAATRKRKGKGKVGEDD 969
Query: 189 -------STFFENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSD 241
+ F EN LA LD+++GCGG+S GL VT+WA++ +
Sbjct: 970 LKVERQKTAFQENC---------LATLDIFAGCGGLSEGLQQSGVS-----VTKWAIEYE 1015
Query: 242 KSACESLKLNHPEAQV 257
+ A ++ KLNHPE+ +
Sbjct: 1016 EPAGDAFKLNHPESSM 1031
>gi|50509186|dbj|BAD30340.1| putative DNA methyltransferase [Oryza sativa Japonica Group]
Length = 1548
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP+PG+V+ I GGPPCQG SG NRF SP + I+ F+ E+ +P++ L+ENV
Sbjct: 1202 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 1259
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R ++ L+ M YQ RFGI+ AG +G+ Q R R
Sbjct: 1260 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQSRKR 1303
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 35/184 (19%)
Query: 88 VQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPS 147
V+ FYR +D K ++YS + PVD I K ++ KI + ++ +P
Sbjct: 997 VRRFYRPDD--------ISSAKAVYYSENIVKVPVDMIEGK---CEVKKKIDISNSDVP- 1044
Query: 148 SDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNH--------- 198
+ E+ E+ F TG + L +V AT +N
Sbjct: 1045 --VMVEHEFFCEH--FYDPATGALKQLPPNVKLMSVQQKATGALKKNKGKQICESDQVDS 1100
Query: 199 -----GPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHP 253
+ LA LD+++GCGG+S GL A +S T+WA++ ++ A E+ NHP
Sbjct: 1101 DKCTKVSKENRLATLDIFAGCGGLSEGL-QQAGVS----FTKWAIEYEEPAGEAFTKNHP 1155
Query: 254 EAQV 257
EA V
Sbjct: 1156 EAAV 1159
>gi|60544836|gb|AAX22756.1| DMT1 [Arabidopsis thaliana]
Length = 1431
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +P+Y L
Sbjct: 1147 QKSTLPLPGQVDFINGGPPCQGFSGMNRFNQ--SSWSKVQCEMILAFLSFADYFRPRYFL 1204
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + F+K + L+ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1205 LENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQSRKR 1252
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
+V+ FYR ED V E A D + L++S P + K V + + I
Sbjct: 938 KVRRFYRPED-VSAEKAYASDIQELYFSQDTVVLPPGALEGKCEVRKKSDMPLSREYPIS 996
Query: 147 SSDFYFDMEYCVEYSTFRTL---LTGKIHDLSLPSCTETVPTTATSTFFEN---MPNHGP 200
F+ D+ + + + L + K + + + E+ P P
Sbjct: 997 DHIFFCDLFFDTSKGSLKQLPANMKPKFSTIKDDTLLRKKKGKGVESEIESEIVKPVEPP 1056
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
+ LA LD+++GCGG+S GL K ++ +WA++ ++ A ++ K NHPE+ V
Sbjct: 1057 KEIRLATLDIFAGCGGLSHGL---KKAGVSD--AKWAIEYEEPAGQAFKQNHPESTV 1108
>gi|115470907|ref|NP_001059052.1| Os07g0182900 [Oryza sativa Japonica Group]
gi|113610588|dbj|BAF20966.1| Os07g0182900, partial [Oryza sativa Japonica Group]
Length = 445
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP+PG+V+ I GGPPCQG SG NRF SP + I+ F+ E+ +P++ L+ENV
Sbjct: 99 LPVPGEVEFINGGPPCQGFSGMNRFNQ--SPWSKVQCEMILAFLSFAEYFRPRFFLLENV 156
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R ++ L+ M YQ RFGI+ AG +G+ Q R R
Sbjct: 157 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQSRKR 200
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 5/53 (9%)
Query: 205 LALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
LA LD+++GCGG+S GL A +S T+WA++ ++ A E+ NHPEA V
Sbjct: 9 LATLDIFAGCGGLSEGL-QQAGVS----FTKWAIEYEEPAGEAFTKNHPEAAV 56
>gi|15239810|ref|NP_199727.1| DNA (cytosine-5)-methyltransferase 1 [Arabidopsis thaliana]
gi|462650|sp|P34881.1|DNMT1_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase 1; AltName: Full=DNA
methyltransferase 01; AltName: Full=DNA methyltransferase
2; AltName: Full=DNA methyltransferase AthI; Short=DNA
Metase AthI; Short=M.AthI; AltName: Full=DNA
methyltransferase DDM2; AltName: Full=Protein DECREASED
DNA METHYLATION 2
gi|304107|gb|AAA32829.1| cytosine-5 methyltransferase [Arabidopsis thaliana]
gi|10177145|dbj|BAB10334.1| DNA (cytosine-5)-methyltransferase [Arabidopsis thaliana]
gi|332008394|gb|AED95777.1| DNA (cytosine-5)-methyltransferase 1 [Arabidopsis thaliana]
Length = 1534
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +P+Y L+ENV
Sbjct: 1183 LPLPGQVDFINGGPPCQGFSGMNRFNQ--SSWSKVQCEMILAFLSFADYFRPRYFLLENV 1240
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ F+K + L+ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1241 RTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQSRKR 1284
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
+V+ FYR ED V E A D + L++S P + K V + + I
Sbjct: 970 KVRRFYRPED-VSAEKAYASDIQELYFSQDTVVLPPGALEGKCEVRKKSDMPLSREYPIS 1028
Query: 147 SSDFYFDMEYCVEYSTFRTL---LTGKIHDLSLPSCTETVPTTATSTFFEN---MPNHGP 200
F+ D+ + + + L + K + + + E+ P P
Sbjct: 1029 DHIFFCDLFFDTSKGSLKQLPANMKPKFSTIKDDTLLRKKKGKGVESEIESEIVKPVEPP 1088
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
+ LA LD+++GCGG+S GL K ++ +WA++ ++ A ++ K NHPE+ V
Sbjct: 1089 KEIRLATLDIFAGCGGLSHGL---KKAGVSD--AKWAIEYEEPAGQAFKQNHPESTV 1140
>gi|297792161|ref|XP_002863965.1| hypothetical protein ARALYDRAFT_331330 [Arabidopsis lyrata subsp.
lyrata]
gi|297309800|gb|EFH40224.1| hypothetical protein ARALYDRAFT_331330 [Arabidopsis lyrata subsp.
lyrata]
Length = 1532
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +P+Y L+ENV
Sbjct: 1181 LPLPGQVDFINGGPPCQGFSGMNRFNQ--SSWSKVQCEMILAFLSFADYFRPRYFLLENV 1238
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ F+K + L+ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1239 RTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQSRKR 1282
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
+V+ FYR ED V E A D + L+YS + P + K V + + I
Sbjct: 968 KVRRFYRPED-VSVEKAYASDIQELYYSQDTDVLPPGALEGKCEVRKKSDMPLCREYPIS 1026
Query: 147 SSDFYFDMEYCVEYSTFRTLLT------GKIHDLSLPSCTETVPTTATSTFFENMPNHGP 200
F+ D+ + + + L I D +L + + + P+ P
Sbjct: 1027 DHIFFCDLFFDSSKGSLKQLPANMKLKFSTIKDDTLLRKKKGKGVESETVSEIVKPDEPP 1086
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
+ LA LD+++GCGG+S GL K ++ T+WA++ ++ A ++ K NHPE+ V
Sbjct: 1087 KEIRLATLDIFAGCGGLSQGL---KKAGVSD--TKWAIEYEEPAGQAFKQNHPESTV 1138
>gi|242022906|ref|XP_002431878.1| DNA cytosine-5,-methyltransferase, putative [Pediculus humanus
corporis]
gi|212517219|gb|EEB19140.1| DNA cytosine-5,-methyltransferase, putative [Pediculus humanus
corporis]
Length = 1330
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Query: 400 NCPERIKEFVRNGFKS---KILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQ 456
+C +KE + K+ + LP G+VD+ICGGPPCQG SG NRF + +N
Sbjct: 923 DCNTLLKEVMSGKLKNDKGQCLPQKGEVDLICGGPPCQGFSGMNRFNS--RQYSQFKNSL 980
Query: 457 IVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLP 516
+V F+ ++ +PKY ++ENV + + F ++ + + L L+ M YQ FG++ AG YG+P
Sbjct: 981 VVSFLSYCDYFRPKYFILENVRNFVAFKRSMVLKQTLYCLISMGYQCTFGVLQAGNYGIP 1040
Query: 517 QFRLR 521
Q R R
Sbjct: 1041 QTRRR 1045
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 89/217 (41%), Gaps = 25/217 (11%)
Query: 69 HIGKILEFFKTT-DGEEY--FRVQWFYRAEDTVMKEAAD--FHDRKRLFYSTVMNDNPVD 123
+IG I E + T GE+ +V FYR E+T + + F+D L++ST
Sbjct: 724 NIGYIREIYTETFKGEDVIKLKVNKFYRPENTHLNKTRKDLFYDLNLLYWSTEEEKISFT 783
Query: 124 CIISKVIVAQIPPKIGLKSNSIPS--SDFYFDMEYCVEYSTFR--------TLLTGKIHD 173
+ K V + + K N + + + FYF Y E F T + K
Sbjct: 784 DVEGKCYVRYL--EDDNKDNWLKNGPNRFYFQESYDSESENFTEPKSYFSITGKSNKGKG 841
Query: 174 LSLPSCTETVPTTATSTFFENMPNHGPHKAE-LALLDLYSGCGGMSTGLCLGAKLSCTNL 232
TE + + E++ P ++ L LD+++GCGG+S GL
Sbjct: 842 KGKLKKTEQISSKLDEENMEDI--IWPEISDKLRTLDVFAGCGGLSEGLHQSGVSK---- 895
Query: 233 VTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELV 269
T WA++ D A + K N+P A V E L+ V
Sbjct: 896 -TLWAIEQDSDAASAFKQNNPNATVFTEDCNTLLKEV 931
>gi|449462818|ref|XP_004149137.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Cucumis
sativus]
Length = 1523
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP PG V+ I GGPPCQG SG NRF S + I+ F+ E+ +PKY L+ENV
Sbjct: 1172 LPRPGQVEFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFAEYFRPKYFLLENV 1229
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R L+ L+ M YQ +FGI+ AG YG+ Q R R
Sbjct: 1230 RNFVSFNKGQTFRLTLASLLEMGYQVKFGILEAGAYGISQSRKR 1273
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 5/56 (8%)
Query: 200 PHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEA 255
P + LA LD+++GCGG+S GL A +S VT+WA++ ++ A E+ LNHPEA
Sbjct: 1077 PLENRLATLDIFAGCGGLSEGL-QQAGVS----VTKWAIEYEEPAGEAFSLNHPEA 1127
>gi|213498012|emb|CAS84141.1| DNA (cytosine-5) methyltransferase [Nicotiana tomentosiformis]
Length = 395
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +PK+ L+ENV
Sbjct: 80 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYYRPKFFLLENV 137
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F++ R ++ L+ M YQ RFGI+ AG +G+PQ R R
Sbjct: 138 RNFVSFNQKQTFRLTVASLLEMGYQVRFGILEAGAFGVPQSRKR 181
>gi|328708218|ref|XP_003243626.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Acyrthosiphon
pisum]
Length = 1227
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
K++ +P G+VD ICGGPPCQG SG NRF + L +N IV F+ ++F +PKY +
Sbjct: 830 KNQNIPQKGEVDFICGGPPCQGFSGMNRFNSGQYSL--FKNSLIVSFLSYIDFYRPKYFV 887
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
MENV + + F ++ + + L + M YQ FGI+ AG +G+PQ R R
Sbjct: 888 MENVRNFVSFKRSMVLKLTLRCITRMGYQCTFGILQAGNFGVPQTRRR 935
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 208 LDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLE 267
LD+++GCGG+S GL + ++ WA++ D A + KLN+PEA V E L+
Sbjct: 765 LDIFAGCGGLSRGLEDSGLV-----ISNWAIECDDKAAGAFKLNNPEATVFVEDCNHLLK 819
Query: 268 LVKEWQK 274
L +K
Sbjct: 820 LAMAGEK 826
>gi|297739461|emb|CBI29643.3| unnamed protein product [Vitis vinifera]
Length = 460
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP PG VD I GGPPCQG SG NRF + I+ F+ ++ +P++ L+ENV
Sbjct: 115 LPRPGQVDFINGGPPCQGFSGMNRFNQ--GKWSKMQCEMILAFLSFADYFRPRFFLLENV 172
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R L+ L+ M YQ RFG++ AG YG+PQ R R
Sbjct: 173 RNFVTFNKGQTFRLTLASLLEMGYQVRFGVLEAGAYGVPQSRRR 216
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%), Gaps = 5/54 (9%)
Query: 202 KAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEA 255
K+ LA LD+++GCGG+S GL A +S +T+WA++ ++ A E+ LNHP+A
Sbjct: 22 KSRLATLDVFAGCGGLSEGL-QQAGVS----LTKWAIEYEEPAGEAFHLNHPDA 70
>gi|147853569|emb|CAN82351.1| hypothetical protein VITISV_019436 [Vitis vinifera]
Length = 377
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP PG VD I GGPPCQG SG NRF + I+ F+ ++ +P++ L+ENV
Sbjct: 32 LPRPGQVDFINGGPPCQGFSGMNRFNQ--GKWSKMQCEMILAFLSFADYFRPRFFLLENV 89
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R L+ L+ M YQ RFG++ AG YG+PQ R R
Sbjct: 90 RNFVTFNKGQTFRLTLASLLEMGYQVRFGVLEAGAYGVPQSRRR 133
>gi|357516637|ref|XP_003628607.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355522629|gb|AET03083.1| Cytosine-specific methyltransferase [Medicago truncatula]
Length = 171
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 83/160 (51%), Gaps = 42/160 (26%)
Query: 74 LEFFKTTDGEEYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQ 133
LE F++ DGE +FR QW+YRA+DT++ D KR+FYS V +DNP+DC++ K+ +A+
Sbjct: 49 LEMFESVDGELFFRAQWYYRAKDTLI-------DPKRVFYSEVQDDNPLDCLVGKLNIAR 101
Query: 134 IPPKIGLKSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFE 193
L+ N IPS E S+ + + S
Sbjct: 102 ------LELNDIPS-----------ETSSI---------------VSSDIEVNGISELNT 129
Query: 194 NMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLV 233
N+ N P EL LLDLYSGCG MSTGLC G LS + ++
Sbjct: 130 NIANTKP---ELKLLDLYSGCGAMSTGLCQGGILSGSKMM 166
>gi|110740122|dbj|BAF01962.1| DNA (cytosine-5)-methyltransferase [Arabidopsis thaliana]
Length = 603
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +P+Y L
Sbjct: 248 QKSTLPLPGQVDFINGGPPCQGFSGMNRFNQ--SSWSKVQCEMILAFLSFADYFRPRYFL 305
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + F+K + L+ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 306 LENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQSRKR 353
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
+V+ FYR ED V E A D + L++S P + K V + + I
Sbjct: 39 KVRRFYRPED-VSAEKAYASDIQELYFSQDTVVLPPGALEGKCEVRKKSDMPLSREYPIS 97
Query: 147 SSDFYFDMEYCVEYSTFRTL---LTGKIHDLSLPSCTETVPTTATSTFFEN---MPNHGP 200
F+ D+ + + + L + K + + + E+ P P
Sbjct: 98 DHIFFCDLFFDTSKGSLKQLPANMKPKFSTIKDDTLLRKKKGKGVESEIESEIVKPVEPP 157
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
+ LA LD+++GCGG+S GL K ++ +WA++ ++ A ++ K NHPE+ V
Sbjct: 158 KEIRLATLDIFAGCGGLSHGL---KKAGVSD--AKWAIEYEEPAGQAFKQNHPESTV 209
>gi|147771321|emb|CAN71866.1| hypothetical protein VITISV_027340 [Vitis vinifera]
Length = 374
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +P++ L+ENV
Sbjct: 31 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYFRPRFFLLENV 88
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R ++ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 89 RNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGAYGVSQSRKR 132
>gi|449494652|ref|XP_004159609.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1B-like [Cucumis
sativus]
Length = 544
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP PG V+ I GGPPCQG SG NRF S + I+ F+ E+ +PKY L+ENV
Sbjct: 193 LPRPGQVEFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFAEYFRPKYFLLENV 250
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K R L+ L+ M YQ +FGI+ AG YG+ Q R R
Sbjct: 251 RNFVSFNKGQTFRLTLASLLEMGYQVKFGILEAGAYGISQSRKR 294
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 68/153 (44%), Gaps = 28/153 (18%)
Query: 111 LFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSD--------FYFDMEYCVEYST 162
L+YS PV I K V K IP ++ F+ + Y E
Sbjct: 16 LYYSDETTMKPVSAIEGKCEVR--------KKQDIPVANCPAIFDHIFFCEHLYDPEKGA 67
Query: 163 FRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGMSTGLC 222
+ L LS PS + A EN+P + LA LD+++GCGG+S GL
Sbjct: 68 IKKLPASV--KLSSPS-ERQISDAAQRKKKENLP----LENRLATLDIFAGCGGLSEGL- 119
Query: 223 LGAKLSCTNLVTRWALDSDKSACESLKLNHPEA 255
A +S VT+WA++ ++ A E+ LNHPEA
Sbjct: 120 QQAGVS----VTKWAIEYEEPAGEAFSLNHPEA 148
>gi|297800866|ref|XP_002868317.1| hypothetical protein ARALYDRAFT_355413 [Arabidopsis lyrata subsp.
lyrata]
gi|297314153|gb|EFH44576.1| hypothetical protein ARALYDRAFT_355413 [Arabidopsis lyrata subsp.
lyrata]
Length = 1506
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF D + I+ F+ ++ +PKY L+ENV
Sbjct: 1155 LPLPGQVDFINGGPPCQGFSGMNRFS--DRSWSKVQCEMILAFLSFADYFRPKYFLLENV 1212
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
I+ F+ + ++ L+ M YQ RFG++ AG YG+ Q R R
Sbjct: 1213 KKIVSFNNGQTFQLTIASLLEMGYQVRFGLLEAGAYGISQPRKR 1256
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 40/62 (64%), Gaps = 5/62 (8%)
Query: 196 PNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEA 255
P+ P + LA LD+++GCGG+S GL K ++ T+WA++ ++ A ++ K NHP+A
Sbjct: 1056 PDEAPKEMRLATLDIFAGCGGLSYGL---EKAGVSD--TKWAIEYEEPAAQAFKQNHPDA 1110
Query: 256 QV 257
V
Sbjct: 1111 TV 1112
>gi|168010951|ref|XP_001758167.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690623|gb|EDQ76989.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1579
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
K K+LP G+VD I GGPPCQG SG NRF + I+ F+ E+ +P+Y L
Sbjct: 1214 KKKLLPAQGEVDFINGGPPCQGFSGMNRFNT--GAWSKVQCEMILGFLSYAEYFRPRYFL 1271
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F+K R L+ L+ M YQ RFG++ AG YG+ Q R R
Sbjct: 1272 LENVRNFVSFNKGQTFRLTLATLLEMGYQVRFGVLQAGNYGVSQSRKR 1319
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 205 LALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
LA LD+++GCGG+S GL + T+WA++ + A E+ LNHPE V
Sbjct: 1128 LATLDIFAGCGGLSEGLRQAGVAT-----TKWAIEYEHPASEAFNLNHPETNV 1175
>gi|302760531|ref|XP_002963688.1| hypothetical protein SELMODRAFT_80009 [Selaginella moellendorffii]
gi|300168956|gb|EFJ35559.1| hypothetical protein SELMODRAFT_80009 [Selaginella moellendorffii]
Length = 1471
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVD-SPLDDERNRQIVIFMDIVEFLKPKYVLMEN 476
LP PG+VD I GGPPCQG SG NRF + S + E ++ F+ ++ +P+Y L+EN
Sbjct: 1125 LPRPGEVDFISGGPPCQGFSGMNRFNKRNWSKIQCE---MVLGFLSYADYFRPRYFLLEN 1181
Query: 477 VVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
V + + F+K R L+ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1182 VRNFVSFNKGQTFRLTLASLLEMGYQVRFGILQAGHYGISQSRTR 1226
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 5/54 (9%)
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
+L++LD+++GCGG+S G+ S T+WA++ D +A E+ K+NHP A V
Sbjct: 1034 KLSMLDIFAGCGGLSEGIHQSGIAS-----TKWAIEYDHAAAEAFKMNHPTATV 1082
>gi|302786012|ref|XP_002974777.1| hypothetical protein SELMODRAFT_232368 [Selaginella moellendorffii]
gi|300157672|gb|EFJ24297.1| hypothetical protein SELMODRAFT_232368 [Selaginella moellendorffii]
Length = 1335
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVD-SPLDDERNRQIVIFMDIVEFLKPKYVLMEN 476
LP PG+VD I GGPPCQG SG NRF + S + E ++ F+ ++ +P+Y L+EN
Sbjct: 989 LPRPGEVDFISGGPPCQGFSGMNRFNKRNWSKIQCE---MVLGFLSYADYFRPRYFLLEN 1045
Query: 477 VVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
V + + F+K R L+ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1046 VRNFVSFNKGQTFRLTLASLLEMGYQVRFGILQAGHYGISQSRTR 1090
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 20/184 (10%)
Query: 82 GEEYFRVQWFYRAEDTVMKEA--ADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIG 139
G E V+ FYR ED + +A AD H+ +++ + + K V + +
Sbjct: 775 GAEQLTVRKFYRPEDVDLGKAYKADVHE---VYFCERTTTISLAAVRGKCTVVK-RQEFT 830
Query: 140 LKSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSL---PSCTETVPTTATSTFFEN-- 194
+ S + D +F CV Y + + ++ L P+ + E+
Sbjct: 831 VASETKALMDLFFCS--CV-YDPLKGTVKQLPANVKLGKPPAASSLASAKGKGKLVEDDR 887
Query: 195 MPNHGPHKAE-LALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHP 253
P E L++LD+++GCGG+S G+ S T+WA++ D +A E+ K+NHP
Sbjct: 888 QPKETSANDEKLSMLDIFAGCGGLSEGIHQSGIAS-----TKWAIEYDHAAAEAFKMNHP 942
Query: 254 EAQV 257
A V
Sbjct: 943 TATV 946
>gi|156365066|ref|XP_001626663.1| predicted protein [Nematostella vectensis]
gi|156213548|gb|EDO34563.1| predicted protein [Nematostella vectensis]
Length = 1263
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
+P G+V+++CGGPPCQG SG NRF + L +N +V ++ +F +P++ ++ENV
Sbjct: 861 IPQRGEVELLCGGPPCQGFSGMNRFNTREYSLF--KNSLVVSYLSYCDFYRPRFFILENV 918
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F K+ + + L L+ M YQ FG++ AGCYG+PQ R R
Sbjct: 919 RNFVSFKKSMVLKLTLRCLLRMGYQCTFGVLQAGCYGVPQTRRR 962
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNE 260
H +L LD+++GCGG+S GL + WA++ ++ A ++ +LN+P V +
Sbjct: 785 HVRKLRSLDVFAGCGGLSEGLHQAGVAE-----SLWAIEKEEPAAQAYRLNNPGCTVFTD 839
Query: 261 AAEDFLELVKE 271
L+L E
Sbjct: 840 DCNTLLKLAME 850
>gi|357516639|ref|XP_003628608.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355522630|gb|AET03084.1| Cytosine-specific methyltransferase [Medicago truncatula]
Length = 159
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 49/151 (32%)
Query: 355 YEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFK 414
+EV +++D+ Y DP + K GL FKV WKGY +
Sbjct: 33 FEVPKVIDMRYNDPKKEDKHGLYFKVFWKGYDS--------------------------- 65
Query: 415 SKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLM 474
G DV+CGGPPCQGI ++ + F+ IV +L+PK+ LM
Sbjct: 66 -------GVEDVVCGGPPCQGI---------------KKQTTSLFFIHIVHYLRPKFTLM 103
Query: 475 ENVVDILKFDKASLGRYALSRLVHMKYQARF 505
ENVVD+LKF L RYAL RLV M Y++
Sbjct: 104 ENVVDLLKFSYGFLVRYALGRLVQMSYRSHL 134
>gi|15236413|ref|NP_193150.1| DNA methyltransferase 2 [Arabidopsis thaliana]
gi|2244770|emb|CAB10193.1| (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|7268119|emb|CAB78456.1| (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|332657979|gb|AEE83379.1| DNA methyltransferase 2 [Arabidopsis thaliana]
Length = 1519
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF + + I+ F+ ++ +PKY L+ENV
Sbjct: 1168 LPLPGQVDFINGGPPCQGFSGMNRFSH--GSWSKVQCEMILAFLSFADYFRPKYFLLENV 1225
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ ++K + ++ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1226 KKFVTYNKGRTFQLTMASLLEMGYQVRFGILEAGTYGVSQPRKR 1269
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
++ FYR ED + +E A D + L+YS P + I K V + + I
Sbjct: 954 KLTRFYRPED-ISEEKAYASDIQELYYSQDTYILPPEAIQGKCEVRKKSDMPLCREYPIL 1012
Query: 147 SSDFYFDM------EYCVEYSTFRTLLTGKIHDLSLPSCTETVPT-TATSTFFENMPNHG 199
F+ ++ Y ++ L I D +L + T TS+ P+
Sbjct: 1013 DHIFFCEVFYDSSTGYLKQFPANMKLKFSTIKDETLLREKKGKGVETGTSSGMLMKPDEV 1072
Query: 200 PHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
P + LA LD+++GCGG+S GL A +S T+WA++ ++ A + K NHPEA V
Sbjct: 1073 PKEKPLATLDIFAGCGGLSHGL-ENAGVS----TTKWAIEYEEPAGHAFKQNHPEATV 1125
>gi|6523846|gb|AAF14882.1|AF138283_1 cytosine-5 methyltransferase [Arabidopsis thaliana]
Length = 1517
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF + + I+ F+ ++ +PKY L+ENV
Sbjct: 1166 LPLPGQVDFINGGPPCQGFSGMNRFSH--GSWSKVQCEMILAFLSFADYFRPKYFLLENV 1223
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ ++K + ++ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1224 KKFVTYNKGRTFQLTMASLLEMGYQVRFGILEAGTYGVSQPRKR 1267
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
++ FYR ED + +E A D + L+YS P + I K V + + I
Sbjct: 952 KLTRFYRPED-ISEEKAYASDIQELYYSQDTYILPPEAIQGKCEVRKKSDMPLCREYPIL 1010
Query: 147 SSDFYFDM------EYCVEYSTFRTLLTGKIHDLSLPSCTETVPT-TATSTFFENMPNHG 199
F+ ++ Y ++ L I D +L + T TS+ P+
Sbjct: 1011 DHIFFCEVFYDSSTGYLKQFPANMKLKFSTIKDETLLREKKGKGVETGTSSGMLMKPDEV 1070
Query: 200 PHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
P + LA LD+++GCGG+S GL A +S T+WA++ ++ A + K NHPEA V
Sbjct: 1071 PKEKPLATLDIFAGCGGLSHGL-ENAGVS----TTKWAIEYEEPAGHAFKQNHPEATV 1123
>gi|334186509|ref|NP_001190725.1| DNA methyltransferase 2 [Arabidopsis thaliana]
gi|332657980|gb|AEE83380.1| DNA methyltransferase 2 [Arabidopsis thaliana]
Length = 1545
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF + + I+ F+ ++ +PKY L+ENV
Sbjct: 1194 LPLPGQVDFINGGPPCQGFSGMNRFSH--GSWSKVQCEMILAFLSFADYFRPKYFLLENV 1251
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ ++K + ++ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1252 KKFVTYNKGRTFQLTMASLLEMGYQVRFGILEAGTYGVSQPRKR 1295
>gi|112983430|ref|NP_001036980.1| DNA cytosine-5 methyltransferase [Bombyx mori]
gi|54888739|dbj|BAD67189.1| DNA cytosine-5 methyltransferase [Bombyx mori]
Length = 1409
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 69/111 (62%), Gaps = 5/111 (4%)
Query: 411 NGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
NG + LP+ G+V+++CGGPPCQG SG NRF + + + +N + ++ ++ +PK
Sbjct: 1014 NGLR---LPMQGEVELLCGGPPCQGFSGMNRFNSRE--YSNFKNSLVASYLSFCDYYRPK 1068
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
Y ++ENV + + F K + + L L+ M YQ FGI+ AG YG+PQ R R
Sbjct: 1069 YFILENVRNFVAFKKGMVLKLTLRALLDMGYQCTFGILQAGNYGVPQTRRR 1119
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 74/203 (36%), Gaps = 35/203 (17%)
Query: 85 YFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISK---VIVAQIPPKIGLK 141
Y +V R E+T K D L+++T + + P ++ + +P I L+
Sbjct: 820 YLKVNVLLRPENTSSK-FPQHEDTNVLYWTTEIREIPFSTVVGHCHLIYEQNVPQNISLQ 878
Query: 142 S--NSIPSSDFYFDMEYCVEYSTFRTLLTGKIH-------------DLSLPSCTETVPTT 186
+ P FYF M YC F L I ETVP
Sbjct: 879 EWLGNDPCR-FYFRMAYCKSTGEFTDLPQNAISVGRTDRTKDKGKGKGKSTKTIETVPAK 937
Query: 187 ATSTFFENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACE 246
L LD+++GCGG+S GL C +WA+++ ++A
Sbjct: 938 VVEEKIR----------PLRTLDVFAGCGGLSEGLHQAGVAEC-----KWAIENVEAASH 982
Query: 247 SLKLNHPEAQVRNEAAEDFLELV 269
+ LN+ V NE L+ V
Sbjct: 983 AYSLNNKSCIVFNEDCNALLKTV 1005
>gi|383852983|ref|XP_003702004.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Megachile
rotundata]
Length = 1698
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP G V+++CGGPPCQG SG NRF + L +N +V ++ ++ +PK+ +MENV
Sbjct: 1246 LPQKGQVELLCGGPPCQGFSGMNRFNSRQYSL--FKNSLVVSYLSYCDYYRPKFFIMENV 1303
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F K+ + + L LV M YQ FGI+ AG YG+PQ R R
Sbjct: 1304 RNFVSFKKSMVLKLTLRCLVRMGYQCTFGILQAGNYGVPQTRRR 1347
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 32 EDKIVS-NVECHYAQARIGECIFDLGDCAYI--KGEGTQKHIGKILEFFKTTDGEEYFRV 88
EDKI + N + Y +G+ ++ DC + + H+ KI+ ++T +G + F
Sbjct: 759 EDKIAADNQKTFYKSVMVGDERIEINDCVLVEPRNPAIPLHVAKIIYMWETKNGLKQFHA 818
Query: 89 QWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIV 131
WF+R DT++ E +D + LF S +D P + SK V
Sbjct: 819 NWFHRGTDTILGETSDPIE---LFLSDDCDDVPFKSVKSKCTV 858
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 12/127 (9%)
Query: 150 FYFDMEYCVEYSTF-----RTLLTGKIHDLSLPSCTETVPTTATST-FFENMP-NHGPHK 202
FYF+ Y V+ +F + GK + T F N P + P
Sbjct: 1112 FYFNEAYNVQEKSFDEPPYHAISIGKSGKSKGNLKLKGKKTEENKKKIFANQPIEYKPIS 1171
Query: 203 AELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAA 262
+L LD+++GCGG+S GL NL WA++ ++ A + +LN+P A V E
Sbjct: 1172 RKLKTLDVFAGCGGLSEGLHQAD--IAENL---WAIEKEEPAAYAYRLNYPNATVFTEDC 1226
Query: 263 EDFLELV 269
L+ V
Sbjct: 1227 NILLQKV 1233
>gi|357626147|gb|EHJ76342.1| DNA cytosine-5 methyltransferase [Danaus plexippus]
Length = 1363
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
+P+ G+V+++CGGPPCQG SG NRF + + + +N + ++ +F +PKY ++ENV
Sbjct: 975 IPMQGEVELLCGGPPCQGFSGMNRFNSRE--YSNFKNSLVASYLSFCDFYRPKYFILENV 1032
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F K + + L L+ M YQ FGI+ AG YG+PQ R R
Sbjct: 1033 RNFVAFKKGMVLKLTLRALLDMGYQCTFGILQAGNYGVPQTRRR 1076
>gi|15236676|ref|NP_192638.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|7267541|emb|CAB78023.1| Met2-type cytosine DNA-methyltransferase-like protein [Arabidopsis
thaliana]
gi|332657308|gb|AEE82708.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
Length = 1512
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG D I GGPPCQG SG NRF D + I+ F+ ++ +PKY L+ENV
Sbjct: 1161 LPLPGQADFISGGPPCQGFSGMNRFS--DGSWSKVQCEMILAFLSFADYFRPKYFLLENV 1218
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ ++K + ++ L+ + YQ RFGI+ AG YG+ Q R R
Sbjct: 1219 KKFVTYNKGRTFQLTMASLLEIGYQVRFGILEAGTYGVSQPRKR 1262
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 29/195 (14%)
Query: 78 KTTDGEEYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPK 137
K ++ ++ FYR ED + +E A D + L+YS P + + K V
Sbjct: 938 KASNASFQVKLTRFYRPED-ISEEKAYASDIQELYYSHDTYILPPEALQGKCEVR----- 991
Query: 138 IGLKSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIH----DLSLPSCT---ETV------- 183
K N +P Y +++ F TG + ++ L T ET+
Sbjct: 992 ---KKNDMPLCREYPILDHIFFCEVFYDSSTGYLKQFPANMKLKFSTIKDETLLREKKGK 1048
Query: 184 -PTTATSTFFENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDK 242
T TS+ P+ P + LA LD+++GCGG+S GL K +N T+WA++ ++
Sbjct: 1049 GVETGTSSGILMKPDEVPKEMRLATLDIFAGCGGLSHGL---EKAGVSN--TKWAIEYEE 1103
Query: 243 SACESLKLNHPEAQV 257
A + K NHPEA V
Sbjct: 1104 PAGHAFKQNHPEATV 1118
>gi|2952287|gb|AAC05489.1| chromomethylase [Quercus palustris]
Length = 62
Score = 95.1 bits (235), Expect = 9e-17, Method: Composition-based stats.
Identities = 38/61 (62%), Positives = 54/61 (88%)
Query: 437 SGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRL 496
SG+NRFRN ++PLDDE+N+Q++++M++V+ LKP+YVLMENVVD++KF LGRYAL RL
Sbjct: 1 SGFNRFRNKENPLDDEKNKQLIVYMNLVQHLKPRYVLMENVVDLVKFANGFLGRYALGRL 60
Query: 497 V 497
+
Sbjct: 61 I 61
>gi|2952281|gb|AAC05486.1| chromomethylase [Sedum obtusatum]
Length = 62
Score = 94.7 bits (234), Expect = 9e-17, Method: Composition-based stats.
Identities = 39/62 (62%), Positives = 53/62 (85%)
Query: 437 SGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRL 496
SG+NRFRN ++PL+D +N QI+++MDIV +LKP++VLMENVVDILK + LGRYAL+RL
Sbjct: 1 SGFNRFRNKENPLEDTKNEQIIVYMDIVNYLKPRFVLMENVVDILKLSQGFLGRYALARL 60
Query: 497 VH 498
+
Sbjct: 61 IQ 62
>gi|283549176|ref|NP_001164521.1| DNA methyltransferase 1a [Nasonia vitripennis]
Length = 1349
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 28/200 (14%)
Query: 342 VNSPRDVDIPPGEYEVA---RIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEG- 397
++P+ +DIPP ++ R +D+ +G GL+ +H G + S + E E
Sbjct: 861 ADAPKLIDIPPDFPQIKKKLRTLDVF------AGCGGLSEGLHQAGVAESSWAIEVDEAA 914
Query: 398 -----LRNCPERIKEFVRNGFKSKI-----------LPLPGDVDVICGGPPCQGISGYNR 441
L N + N + K+ LP G+VD++CGGPPCQG SG NR
Sbjct: 915 AHAYRLNNPNAAVFTGDCNAYLKKVMDGETMAGGQRLPQRGEVDLLCGGPPCQGFSGMNR 974
Query: 442 FRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKY 501
F + L +N +V ++ ++ +P++ +MENV + + F K+ + + L L+ M Y
Sbjct: 975 FNSRAYSL--FKNSLVVSYLSYCDYYRPRFFIMENVRNFVTFKKSMVLKLTLRCLIRMGY 1032
Query: 502 QARFGIIAAGCYGLPQFRLR 521
Q FGI+ AG YG+PQ R R
Sbjct: 1033 QCTFGILQAGNYGVPQTRRR 1052
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 101/237 (42%), Gaps = 28/237 (11%)
Query: 69 HIGKILEFFKTTD------GEEYFRVQWFYRAEDTVMKEAADFH-DRKRLFYSTVMNDNP 121
IG I + TT+ + +V+ YR E+T E+ D L++S P
Sbjct: 731 EIGYITSIYATTNVKLLASTSLHIKVKKLYRPENTFKSESMKGRSDLNMLYWSEEEVTLP 790
Query: 122 VDCIISKVIVAQIPP-KIGLKSNSIPSSD-FYFDMEYCVEYSTF-----RTLLTGKIHDL 174
C++ K + I ++ ++ + FYF Y + F + GK+
Sbjct: 791 FTCVVGKCYLTYSENLDISVEEWTVAGPNRFYFTQMYSHKEEEFDEPPSKACSIGKLIKK 850
Query: 175 SLPSCTETVPTTATSTFFENMPNHGPH-KAELALLDLYSGCGGMSTGLCLGAKLSCTNLV 233
S +++ A ++P P K +L LD+++GCGG+S GL
Sbjct: 851 SDKIKSKSKKADAPKLI--DIPPDFPQIKKKLRTLDVFAGCGGLSEGLHQAGVAE----- 903
Query: 234 TRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKE------WQKLCKRFAVNIV 284
+ WA++ D++A + +LN+P A V +L+ V + Q+L +R V+++
Sbjct: 904 SSWAIEVDEAAAHAYRLNNPNAAVFTGDCNAYLKKVMDGETMAGGQRLPQRGEVDLL 960
>gi|242023477|ref|XP_002432160.1| DNA methyltransferase, putative [Pediculus humanus corporis]
gi|212517542|gb|EEB19422.1| DNA methyltransferase, putative [Pediculus humanus corporis]
Length = 1161
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 419 PLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVV 478
P G+V+ +CGGPPCQG S NRF + N I+ ++ ++ +PK+ L+ENV
Sbjct: 771 PEKGEVEFLCGGPPCQGFSTMNRFTTKEE--SQYNNSLIITYLSFCDYYRPKFFLLENVK 828
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ L F K+ ++ LS LV M YQ FG++ AG YGLPQ R R
Sbjct: 829 NFLSFKKSLFFKHVLSCLVTMGYQCSFGVLQAGNYGLPQSRRR 871
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 36/171 (21%)
Query: 85 YFRVQWFYRAEDTVMKEAAD--FHDRKRLFYSTVMNDNPVDCIISK--VIVAQIPPKIGL 140
+ V+ FYR E+T + +A D D + L++S +D + + VI ++ PP++
Sbjct: 601 FLTVKLFYRPENTRVIKAGDKRLFDLQLLYWSEEEVKVSLDHVQGRCNVIHSEFPPQVNS 660
Query: 141 KSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGP 200
K FYF + TF K+ + + + E V
Sbjct: 661 KI------QFYFHSGFNSANETFY-----KVQNAVIRNAEENVKDVK------------- 696
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLN 251
+L L+ +SGCGG++ GL WA+D DK E+ KLN
Sbjct: 697 ---KLKTLNAFSGCGGLAEGLRQSGIADIA-----WAIDIDKPTSEAFKLN 739
>gi|322792109|gb|EFZ16181.1| hypothetical protein SINV_14765 [Solenopsis invicta]
Length = 298
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP G+V++ICGGPPCQG SG NRF + L +N +V F+ ++ KPK+ +MENV
Sbjct: 138 LPQKGEVELICGGPPCQGFSGMNRFNSRQYSLF--KNSLVVSFLSYCDYYKPKFFIMENV 195
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ K + + L LV M YQ FGI+ AG YG+PQ R R
Sbjct: 196 RNFTSCKKGMVLKLTLRCLVRMGYQCTFGILQAGSYGVPQTRKR 239
>gi|332023953|gb|EGI64171.1| DNA (cytosine-5)-methyltransferase PliMCI [Acromyrmex echinatior]
Length = 1449
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 70/119 (58%), Gaps = 2/119 (1%)
Query: 403 ERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMD 462
+R+ + R + LP GDV+++CGGPPCQG SG NRF L +N IV F+
Sbjct: 999 QRVMDGDRVDNNGQKLPQKGDVELLCGGPPCQGFSGMNRFNLRQYSL--FKNSLIVTFLS 1056
Query: 463 IVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ +PK+ +MENV + + K+ + + L L+ M YQ FGI+ AG YG+PQ R R
Sbjct: 1057 YCDYYRPKFFVMENVRNFVFCKKSMVLKLTLRCLIRMGYQCTFGILQAGSYGVPQTRRR 1115
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 183 VPTTATSTFFENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDK 242
V T E N+ +L +LD+++GCGG+S G+ + WA++ +
Sbjct: 920 VERTEKKQVIETPINYSTIPRKLRMLDIFAGCGGLSEGMHQAGVAE-----SLWAIEKES 974
Query: 243 SACESLKLNHPEAQVRNEAAEDFLELVKEWQKL 275
SA + +LN+P+ V +E L+ V + ++
Sbjct: 975 SAANAYRLNNPKTMVFSEDCNKLLQRVMDGDRV 1007
>gi|15236318|ref|NP_193097.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
gi|4678387|emb|CAB41119.1| DNA (cytosine-5-)-methyltransferase-like protein [Arabidopsis
thaliana]
gi|7268065|emb|CAB78403.1| DNA (cytosine-5-)-methyltransferase-like protein [Arabidopsis
thaliana]
gi|332657902|gb|AEE83302.1| DNA (cytosine-5-)-methyltransferase [Arabidopsis thaliana]
Length = 1404
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG S NRF D + + I+ F+ ++ +PKY L+ENV
Sbjct: 1070 LPLPGQVDFISGGPPCQGFSRLNRFS--DGSWSKNQCQMILAFLSFADYFRPKYFLLENV 1127
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ F++ ++ L+ M YQ RFG++ AG YG+ Q R R
Sbjct: 1128 KTFVSFNEGHTFHLTVASLLEMGYQVRFGLLEAGAYGISQPRKR 1171
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 87 RVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIP 146
+V+ FYR +D V E A D + ++YS P + I K V + + I
Sbjct: 850 KVRRFYRPDD-VSAEEAYASDIQEVYYSEDTYILPPEAIKGKCEVMKKTDMPLCREYPIL 908
Query: 147 SSDFYFDMEY-----CVEYSTFRTLLT-GKIHDLSLPSCTETVPTTATSTFFENMPNHGP 200
++ D Y C++ + +L I D +L E T ++ + P+ P
Sbjct: 909 DHVYFCDRFYDSSNGCLKKLPYNMMLKFSTIKDDTL--LREKKTETGSAMLLK--PDEVP 964
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
LA LD+++GCGG+S GL K ++ T+WA++ ++ A ++ K NHP+ V
Sbjct: 965 KGKRLATLDIFAGCGGLSYGL---EKAGVSD--TKWAIEYEEPAAQAFKQNHPKTTV 1016
>gi|395518186|ref|XP_003763246.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like, partial
[Sarcophilus harrisii]
Length = 692
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV++ICGGPPCQG SG NRF + +N I F+ ++ +PK+ L+ENV
Sbjct: 423 LPQKGDVEMICGGPPCQGFSGMNRFNTLT--YSKFKNSLIASFLSYCDYYRPKFFLLENV 480
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FGI+ AG YG+ Q R R
Sbjct: 481 RNFVSFKRSMVLKLTLRCLVQMGYQCTFGILQAGHYGIAQTRRR 524
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 90/228 (39%), Gaps = 34/228 (14%)
Query: 60 YIKGEGTQK----HIGKILEFF--KTTDGEEY-FRVQWFYRAEDTVMKEAADFHDRKRLF 112
Y+KG IG+I E F K ++G R+ FYR E+T + + L
Sbjct: 199 YVKGSNQDAPQPYRIGQIKEIFCEKESNGAVIKLRINKFYRPENTHKSSTKKYIEDINLL 258
Query: 113 YSTV------MNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDFYFDMEYCVEYSTFRTL 166
Y + D C++ P K L FYF Y + +F +
Sbjct: 259 YWSYEEAVVDFEDVQGRCVVKYCEATDTPEKYNLGDKE----HFYFQEAYNAKKKSFEEV 314
Query: 167 ---LTGKIHDLSLPSCTETVPTTATSTFFE--NMPNHGPHKAELALLDLYSGCGGMSTGL 221
GK +E + T + N+P +L LD++SGCGG+S G
Sbjct: 315 PKYARGKEKRKEKGRGSEKLITLEPIQEMKEVNVP-------KLRTLDVFSGCGGLSEGF 367
Query: 222 CLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELV 269
A +S T WA++ K A ++ LN+P+ V +E L++V
Sbjct: 368 -HQAGIS----ETMWAIEMWKPAGQAFLLNYPKTIVLSEDCNILLKMV 410
>gi|449674400|ref|XP_002155714.2| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Hydra
magnipapillata]
Length = 1283
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 73/122 (59%), Gaps = 5/122 (4%)
Query: 399 RNCPERIKEFVRNGFKSKI---LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNR 455
++C +K+ + K + LP G+VD++CGGPPCQG SG NRF + + +N
Sbjct: 856 QDCNNVLKQIMEGKEKDDLGQRLPRRGEVDLLCGGPPCQGFSGMNRFNQREYSM--FKNS 913
Query: 456 QIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGL 515
+ ++ ++ +PK+ ++ENV + + F K+ + + LS LV M YQ FG++ AG YG+
Sbjct: 914 LVTSYLSYCDYFRPKFFILENVRNFVSFKKSMVLKLTLSCLVKMGYQCEFGVLQAGSYGV 973
Query: 516 PQ 517
PQ
Sbjct: 974 PQ 975
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 14/89 (15%)
Query: 204 ELALLDLYSGCGGMSTGL-CLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAA 262
+L LD+++GCGG+S GL +G SC WA++ + SA ++ +LN+P A V N+
Sbjct: 805 KLRTLDIFAGCGGLSEGLDQVGVVNSC------WAIEFEPSAAQAYRLNNPSAIVFNQDC 858
Query: 263 EDFLELVKE-------WQKLCKRFAVNIV 284
+ L+ + E Q+L +R V+++
Sbjct: 859 NNVLKQIMEGKEKDDLGQRLPRRGEVDLL 887
>gi|383862947|ref|XP_003706944.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Megachile
rotundata]
Length = 1440
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP G+V+++CGGPPCQG SG NRF + L +N +V + ++ +PK+ +MENV
Sbjct: 1045 LPQKGEVELLCGGPPCQGFSGMNRFNSRQYSL--FKNSLVVSCLSYCDYYRPKFFIMENV 1102
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F K+ + + L LV M YQ FGI+ AG YG+PQ R R
Sbjct: 1103 RNFVSFKKSMVLKLTLRCLVRMGYQCTFGILQAGNYGIPQTRRR 1146
>gi|340728437|ref|XP_003402531.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like, partial [Bombus terrestris]
Length = 635
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP G V+++CGGPPCQG SG NRF + L +N +V ++ ++ +P + +MENV
Sbjct: 311 LPQKGQVELLCGGPPCQGFSGMNRFNSRQYSL--FKNSLVVSYLSYCDYYRPNFFIMENV 368
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+++ + + L LV M YQ FGI+ AG YG+PQ R R
Sbjct: 369 RNFVTFERSMVLKLTLRCLVRMGYQCTFGILQAGNYGIPQTRRR 412
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
+L LD+++GCGG+S GL NL WA++ +++A + +LN+P A V +
Sbjct: 236 KLRTLDVFAGCGGLSEGLYQAGITE--NL---WAIEKEEAAANAYRLNNPNATVFTDDCN 290
Query: 264 DFLELV 269
L++V
Sbjct: 291 ILLKMV 296
>gi|148225023|ref|NP_001084021.1| DNA (cytosine-5-)-methyltransferase 1 [Xenopus laevis]
gi|1731732|dbj|BAA11458.1| DNA (cytosine-5-)-methyltransferase [Xenopus laevis]
Length = 1490
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 89/169 (52%), Gaps = 20/169 (11%)
Query: 371 SGKRGLNFKVHWKGYSTSE---DSWEPI-EGLR-NCPER---------IKEFVRNGFKS- 415
SG GL+ H G S + + WEP + R N P + + V +G K+
Sbjct: 1021 SGCGGLSEGFHQAGISETNWAIEMWEPAAQAFRLNNPGTTVFTEDCNILLKLVMSGEKTN 1080
Query: 416 ---KILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYV 472
+ LP GDV+++CGGPPCQG SG NRF + +N +V ++ ++ +PKY
Sbjct: 1081 SLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSYLSYCDYYRPKYF 1138
Query: 473 LMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L+ENV + + F K+ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1139 LLENVRNFVSFKKSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1187
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 31/236 (13%)
Query: 60 YIKGEGTQK----HIGKILEFF-------KTTDGEEYFRVQWFYRAEDTVMKEAADFHDR 108
YIKG +G+I E F K + + R+ FYR E+T A +H
Sbjct: 853 YIKGSNLDAPEPYRLGRIKEIFCNKRSNGKPNEADIKLRIYKFYRPENTHKGMKASYHSD 912
Query: 109 KRLFYSTVMNDNPVDCIISKVIVAQIPPKIG------LKSNSIPSSD-FYFDMEYCVEYS 161
+ Y + + + K + + G ++ S SD FYF Y +
Sbjct: 913 INMVYWS----DEEAVVEFKAVQGHCTVEYGEDLTESIQEYSAGGSDRFYFLEAYNAKTK 968
Query: 162 TFR---TLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGMS 218
+F G ++ + T + + E + N G +L LD++SGCGG+S
Sbjct: 969 SFEDPPNHARGAVNKGKGKGKGKGKGKTPSKSENEQL-NSGDKLPKLRTLDVFSGCGGLS 1027
Query: 219 TGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQK 274
G A +S TN WA++ + A ++ +LN+P V E L+LV +K
Sbjct: 1028 EGF-HQAGISETN----WAIEMWEPAAQAFRLNNPGTTVFTEDCNILLKLVMSGEK 1078
>gi|49117032|gb|AAH72774.1| Dnmt1 protein [Xenopus laevis]
Length = 1490
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 89/169 (52%), Gaps = 20/169 (11%)
Query: 371 SGKRGLNFKVHWKGYSTSE---DSWEPI-EGLR-NCPER---------IKEFVRNGFKS- 415
SG GL+ H G S + + WEP + R N P + + V +G K+
Sbjct: 1021 SGCGGLSEGFHQAGISETNWAIEMWEPAAQAFRLNNPGTTVFTEDCNILLKLVMSGEKTN 1080
Query: 416 ---KILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYV 472
+ LP GDV+++CGGPPCQG SG NRF + +N +V ++ ++ +PKY
Sbjct: 1081 SLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSYLSYCDYYRPKYF 1138
Query: 473 LMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L+ENV + + F K+ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1139 LLENVRNFVSFKKSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1187
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 31/236 (13%)
Query: 60 YIKGEGTQK----HIGKILEFF-------KTTDGEEYFRVQWFYRAEDTVMKEAADFHDR 108
YIKG +G+I E F K + + R+ FYR E+T A +H
Sbjct: 853 YIKGSNLDAPEPYRLGRIKEIFCNKRSNGKPNEADIKLRIYKFYRPENTHKGMKASYHSD 912
Query: 109 KRLFYSTVMNDNPVDCIISKVIVAQIPPKIG------LKSNSIPSSD-FYFDMEYCVEYS 161
+ Y + + + K + + G ++ S SD FYF Y +
Sbjct: 913 INMVYWS----DEEAVVEFKAVQGHCTVEYGEDLTESIQEYSAGGSDRFYFLEAYNAKTK 968
Query: 162 TFR---TLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGMS 218
+F G ++ + T + + E + N G +L LD++SGCGG+S
Sbjct: 969 SFEDPPNHARGAVNKGKGKGKGKGKGKTPSKSENEQL-NSGDKLPKLRTLDVFSGCGGLS 1027
Query: 219 TGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQK 274
G A +S TN WA++ + A ++ +LN+P V E L+LV +K
Sbjct: 1028 EGF-HQAGISETN----WAIEMWEPAAQAFRLNNPGTTVFTEDCNILLKLVMSGEK 1078
>gi|110765384|ref|XP_001122269.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI [Apis mellifera]
Length = 1427
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP G+V+++CGGPPCQG SG NRF + L +N +V + ++ +PK+ +MENV
Sbjct: 1028 LPQKGEVELLCGGPPCQGFSGMNRFNSRQYSL--FKNSLVVSCLSYCDYYRPKFFIMENV 1085
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FGI+ AG YG+PQ R R
Sbjct: 1086 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGILQAGNYGIPQTRRR 1129
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
+L LD+++GCGG+S GL + +WA++ D+ A + +LN+P V
Sbjct: 955 KLKTLDVFAGCGGLSEGLRQAGIVD-----NQWAIEKDEPAACAYRLNNPNTTV 1003
>gi|405116965|gb|AFR91943.1| DNA cytosine-5-methyltransferase 1 [Patiria pectinifera]
Length = 1592
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 70/117 (59%), Gaps = 2/117 (1%)
Query: 405 IKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ E + + + LP G+V+V+CGGPPCQG SG NRF + + +N I ++
Sbjct: 1160 VMEGEKTNGRGQKLPQRGEVEVLCGGPPCQGFSGMNRFNSRE--YSKFKNSLISSYLSYC 1217
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ +PK+ L+ENV + + + K + + AL LV M YQ FG++ AG YG+PQ R R
Sbjct: 1218 DYYRPKFFLLENVRNFVSYKKNMVLKLALRCLVRMGYQCTFGVLQAGHYGVPQTRRR 1274
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 89/241 (36%), Gaps = 37/241 (15%)
Query: 60 YIKGEGTQK----HIGKILEFFKTTDGEEY-FRVQWFYRAEDTVMKEAADFHDRKRLFY- 113
YIKG + IG+I+ F E+ RVQ FYR E+T +A L Y
Sbjct: 944 YIKGNNRECPEPFRIGRIVGIFTRKGSEDIKLRVQKFYRPENTHKGASAGQQSDLNLLYW 1003
Query: 114 ---STVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDFYFDMEYCVEY---------- 160
++ V + V +P I N FYF Y E
Sbjct: 1004 SNEEATVDLTGVQGKPTVVCGDDVPGSIHDYCNG-GQYRFYFLEAYNSETKQFEDPPSEA 1062
Query: 161 ---STFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGM 217
ST S E+V F +L LD+++GCGG+
Sbjct: 1063 RNTSTKGKGKGKGKGKGKGKSSEESVKVEEDEELFFQ---------KLKSLDVFAGCGGL 1113
Query: 218 STGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQKLCK 277
S G A L +N WA++ D+ A ++ +LN+P + V + L LV E +K
Sbjct: 1114 SEGF-HQAGLCESN----WAIEIDEPAAQAFRLNNPGSTVFTDDCNLLLSLVMEGEKTNG 1168
Query: 278 R 278
R
Sbjct: 1169 R 1169
>gi|301609669|ref|XP_002934384.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Xenopus (Silurana)
tropicalis]
Length = 1492
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 89/170 (52%), Gaps = 22/170 (12%)
Query: 371 SGKRGLNFKVHWKGYSTSE---DSWEPI-EGLR-----------NCPERIKEFVRNGFKS 415
SG GL+ H G S + + WEP + R +C +K V +G K+
Sbjct: 1023 SGCGGLSEGFHQAGISETNWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLK-LVMSGEKT 1081
Query: 416 ----KILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKY 471
+ LP GDV+++CGGPPCQG SG NRF + +N +V ++ ++ +PKY
Sbjct: 1082 NSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSYLSYCDYYRPKY 1139
Query: 472 VLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1140 FLLENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1189
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 31/236 (13%)
Query: 60 YIKGEGTQK----HIGKILEFF-------KTTDGEEYFRVQWFYRAEDTVMKEAADFHDR 108
YIKG +G+I E F K + + R+ FYR E+T A +H
Sbjct: 855 YIKGSNLDAPEPYRLGRIKEIFCNKRSNGKANESDIKLRIYKFYRPENTHKGVKASYHSD 914
Query: 109 KRLFYSTVMNDNPVDCIISKVIVAQIPPKIG------LKSNSIPSSD-FYFDMEYCVEYS 161
+ Y + + + K + + G ++ S SD FYF Y +
Sbjct: 915 VNMVYWS----DEEAVVDFKAVQGHCTVEYGEDLTETIQEYSAGGSDRFYFLEAYSAKTK 970
Query: 162 TFR---TLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGMS 218
+F ++ + TA+ + E N G +L LD++SGCGG+S
Sbjct: 971 SFEDPPNHARSAVNKGKGKGKGKGKGKTASKSENEQQ-NCGDKLPKLRTLDVFSGCGGLS 1029
Query: 219 TGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQK 274
G A +S TN WA++ + A ++ +LN+P V E L+LV +K
Sbjct: 1030 EGF-HQAGISETN----WAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEK 1080
>gi|255573870|ref|XP_002527854.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
gi|223532778|gb|EEF34557.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
Length = 1584
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
P PG+V+ I GGPPCQG SG NRF + I+ F+ ++ +PK+ L+ENV
Sbjct: 1214 FPRPGEVEFINGGPPCQGFSGMNRFNQ--RSWSKVQCEMILAFLSFADYFRPKFFLLENV 1271
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F+K + R L+ L+ M YQ RFG++ AG +G+ Q R R
Sbjct: 1272 RNFVSFNKGNTFRLTLASLLEMGYQVRFGVLEAGAFGISQSRKR 1315
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 33/213 (15%)
Query: 60 YIKGEGTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMND 119
Y+ + + +GK L + T +V+ F+R+ED + E A D + ++YS +
Sbjct: 973 YVVCQLLEIQVGKGL--LQVTPESILVKVRRFFRSED-ISAENAYCSDIREVYYSEHIET 1029
Query: 120 NPVDCIISKVIVAQIPPKIGLKSNSIPSSD--------FYFDMEYCVEYSTFRTLLTG-- 169
P+ I K V K + +PS D F+ + Y E T + L
Sbjct: 1030 FPILDIQGKCEVR--------KKHDLPSFDKLAIFEHIFFCEHIYDPEKGTIKQLPAHIK 1081
Query: 170 ------KIHDLSLPSCTETVPTTATSTFFENMP-NHGPHKAELALLDLYSGCGGMSTGLC 222
+++D L + + F +N+ + + +LA LD+++GCGG+S GL
Sbjct: 1082 LSSSKERMNDDILYRKKKGKCKEGENDFDDNVKRSEALSRNQLATLDIFAGCGGLSEGL- 1140
Query: 223 LGAKLSCTNLVTRWALDSDKSACESLKLNHPEA 255
A +S VT+WA++ ++ A E+ K NHPEA
Sbjct: 1141 ERAGIS----VTKWAIEYEEPAGEAFKQNHPEA 1169
>gi|443691961|gb|ELT93682.1| hypothetical protein CAPTEDRAFT_160905 [Capitella teleta]
Length = 1334
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP G+V+++CGGPPCQG SG NRF + + + +N I ++ ++ +PK+ L+ENV
Sbjct: 873 LPQKGEVELLCGGPPCQGFSGMNRFNSREYSM--FKNSLIASYLSYCDYYRPKFFLLENV 930
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + AL L+ M YQ FG++ AG YG+PQ R R
Sbjct: 931 RNFVSFKRSMVLKLALRCLLRMGYQCTFGVLQAGNYGVPQTRRR 974
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 43 YAQARIGECIFDLGDCAYIKGE--GTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTVMK 100
YA AR+ I +GD +K + T +I +I F++ +DG F QW+ R DTV+
Sbjct: 408 YASARLNGEILSVGDYVSVKPDDPSTPVYIAQIKYFYEDSDGTMMFHAQWYSRGSDTVLG 467
Query: 101 EAAD 104
EA+D
Sbjct: 468 EASD 471
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 208 LDLYSGCGGMSTGL-CLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFL 266
LD+++GCGG+S G G SC WA++ ++ A +S +LN+P A V + L
Sbjct: 804 LDVFAGCGGLSEGFHQAGIAESC------WAIEKEEPAAQSFRLNNPGATVFTDDCNLLL 857
Query: 267 ELVKEWQKL 275
+ V E Q +
Sbjct: 858 KAVMEGQTV 866
>gi|417414438|gb|JAA53513.1| Putative translation initiation factor 5b eif-5b, partial [Desmodus
rotundus]
Length = 1581
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P+Y L
Sbjct: 1204 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1261
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1262 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1309
>gi|405957557|gb|EKC23761.1| DNA (cytosine-5)-methyltransferase 1, partial [Crassostrea gigas]
Length = 993
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + + +N I ++ ++ +P++ L+ENV
Sbjct: 796 LPQKGDVELLCGGPPCQGFSGMNRFNSRE--YSRFKNSLIASYLSYCDYYRPRFFLLENV 853
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + AL L M YQ FG++ AG YG+PQ R R
Sbjct: 854 RNFVSFKRSMVLKLALRCLTTMGYQCTFGVLQAGSYGVPQTRRR 897
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 92/236 (38%), Gaps = 31/236 (13%)
Query: 60 YIKGEGTQK----HIGKILEFF--KTTD------GEEYFRVQWFYRAEDTVMKEAADFH- 106
YIKG +G+IL F K++ GE +V FYR EDT +A +H
Sbjct: 563 YIKGSNESVPEPFRVGRILAIFCKKSSGSKIANLGEIKVKVAKFYRPEDTHKGPSAGYHT 622
Query: 107 DRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSD-FYFDMEYCVEYSTFRT 165
D L++S + K V L+ D FYF Y E F
Sbjct: 623 DMNMLYWSDEEATVDFKLVKGKCQVTYSENLRSLEEYLCGGLDRFYFTEAYDSETKMFEE 682
Query: 166 ------LLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGMST 219
+ GK + P+ T P + L LD+++GCGG+S
Sbjct: 683 PPRQARVSGGKGKGKGKGKGKSSGPSAEEETTEPKKPTY----RRLRTLDVFAGCGGISE 738
Query: 220 GL-CLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQK 274
G G SC WA++ ++ A ++ +LN+P V + L+LV E +K
Sbjct: 739 GFHQAGIAESC------WAIEKEEPAGQAFRLNNPGCTVFTDDCNVLLKLVMEGEK 788
>gi|23306232|emb|CAD43079.1| DNA methyltransferase 1c [Paracentrotus lividus]
Length = 1375
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + + +N I ++ ++ +P++ L+ENV
Sbjct: 1204 LPQKGDVELLCGGPPCQGFSGMNRFNSRE--YSKFKNSLISSYLSYCDYYRPRFFLLENV 1261
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + K + + AL L+ M YQ FGI+ AG YG+PQ R R
Sbjct: 1262 RNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVPQTRRR 1305
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 91/231 (39%), Gaps = 19/231 (8%)
Query: 60 YIKGEGTQK----HIGKILEFFKTTDGEEY-FRVQWFYRAEDTVMKEAADFH-DRKRLFY 113
Y+KG + +GKI+ + T RV YR EDT A + D L++
Sbjct: 975 YVKGSNLECPEPFRVGKIISIYTTKSSSTVRLRVNKMYRPEDTHKGRTAAYQADLNVLYW 1034
Query: 114 STVMNDNPVDCIISK--VIVAQIPPKIGLKSNSIPSSDFYFDMEY-----CVEYSTFRTL 166
S ++ + K V+ A+ + ++ FYF Y C E ++
Sbjct: 1035 SEEEAVTELEVVQGKCSVVCAEDLNVSTTEYSAGGPHKFYFREAYDSERKCFEDPPSKSR 1094
Query: 167 LTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAK 226
T + A E P +L LD+++GCGG+S G
Sbjct: 1095 STRMKGKGKGKGKGKAKGKMAVEKEEEKESTETPFN-KLKCLDVFAGCGGLSEGFHQAGI 1153
Query: 227 LSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQKLCK 277
+ WA++ ++ A ++ +LN+P + V ++ + L LV + +K +
Sbjct: 1154 CESS-----WAIEKEEPAAQAYRLNNPGSTVFSDDCNELLRLVMQGEKTSR 1199
>gi|281337410|gb|EFB12994.1| hypothetical protein PANDA_010327 [Ailuropoda melanoleuca]
Length = 1576
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P+Y L
Sbjct: 1167 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1224
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1225 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1272
>gi|2952285|gb|AAC05488.1| chromomethylase [Gaultheria shallon]
Length = 62
Score = 92.4 bits (228), Expect = 5e-16, Method: Composition-based stats.
Identities = 40/61 (65%), Positives = 50/61 (81%)
Query: 437 SGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRL 496
SG+NRFRNV PL D +N+Q+++FMDIVEFLKP++VLMENVVDI K LG YA++RL
Sbjct: 1 SGFNRFRNVTEPLKDPKNQQLIVFMDIVEFLKPRFVLMENVVDIFKLAGGVLGCYAIARL 60
Query: 497 V 497
V
Sbjct: 61 V 61
>gi|73853882|ref|NP_001027526.1| DNA (cytosine-5)-methyltransferase 1 [Sus scrofa]
gi|66363554|gb|AAY45793.1| DNA methyltransferase 1 [Sus scrofa]
Length = 1610
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P+Y L
Sbjct: 1203 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1260
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1261 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1308
>gi|23306230|emb|CAD43077.1| DNA methyltransferase 1a [Paracentrotus lividus]
Length = 1461
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + + +N I ++ ++ +P++ L+ENV
Sbjct: 1052 LPQKGDVELLCGGPPCQGFSGMNRFNSRE--YSKFKNSLISSYLSYCDYYRPRFFLLENV 1109
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + K + + AL L+ M YQ FGI+ AG YG+PQ R R
Sbjct: 1110 RNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVPQTRRR 1153
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 91/231 (39%), Gaps = 19/231 (8%)
Query: 60 YIKGEGTQK----HIGKILEFFKTTDGEEY-FRVQWFYRAEDTVMKEAADFH-DRKRLFY 113
Y+KG + +GKI+ + T RV YR EDT A + D L++
Sbjct: 823 YVKGSNLECPEPFRVGKIISIYTTKSSSTVRLRVNKMYRPEDTHKGRTAAYQADLNVLYW 882
Query: 114 STVMNDNPVDCIISK--VIVAQIPPKIGLKSNSIPSSDFYFDMEY-----CVEYSTFRTL 166
S ++ + K V+ A+ + ++ FYF Y C E ++
Sbjct: 883 SEEEAVTELEVVQGKCSVVCAEDLNVSTTEYSAGGPHKFYFREAYDSERKCFEDPPSKSR 942
Query: 167 LTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAK 226
T + A E P +L LD+++GCGG+S G
Sbjct: 943 STRMKGKGKGKGKGKAKGKMAVEKEEEKESTETPFN-KLKCLDVFAGCGGLSEGFHQAGI 1001
Query: 227 LSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQKLCK 277
+ WA++ ++ A ++ +LN+P + V ++ + L LV + +K +
Sbjct: 1002 CE-----SSWAIEKEEPAAQAYRLNNPGSTVFSDDCNELLRLVMQGEKTSR 1047
>gi|23306229|emb|CAD42182.3| DNA methyltransferase [Paracentrotus lividus]
Length = 1613
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + + +N I ++ ++ +P++ L+ENV
Sbjct: 1204 LPQKGDVELLCGGPPCQGFSGMNRFNSRE--YSKFKNSLISSYLSYCDYYRPRFFLLENV 1261
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + K + + AL L+ M YQ FGI+ AG YG+PQ R R
Sbjct: 1262 RNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVPQTRRR 1305
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 91/231 (39%), Gaps = 19/231 (8%)
Query: 60 YIKGEGTQK----HIGKILEFFKTTDGEEY-FRVQWFYRAEDTVMKEAADFH-DRKRLFY 113
Y+KG + +GKI+ + T RV YR EDT A + D L++
Sbjct: 975 YVKGSNLECPEPFRVGKIISIYTTKSSSTVRLRVNKMYRPEDTHKGRTAAYQADLNVLYW 1034
Query: 114 STVMNDNPVDCIISK--VIVAQIPPKIGLKSNSIPSSDFYFDMEY-----CVEYSTFRTL 166
S ++ + K V+ A+ + ++ FYF Y C E ++
Sbjct: 1035 SEEEAVTELEVVQGKCSVVCAEDLNVSTTEYSAGGPHKFYFREAYDSERKCFEDPPSKSR 1094
Query: 167 LTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAK 226
T + A E P +L LD+++GCGG+S G
Sbjct: 1095 STRMKGKGKGKGKGKAKGKMAVEKEEEKESTETPFN-KLKCLDVFAGCGGLSEGFHQAGI 1153
Query: 227 LSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQKLCK 277
+ WA++ ++ A ++ +LN+P + V ++ + L LV + +K +
Sbjct: 1154 CESS-----WAIEKEEPAAQAYRLNNPGSTVFSDDCNELLRLVMQGEKTSR 1199
>gi|410950440|ref|XP_003981913.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Felis catus]
Length = 1610
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P+Y L
Sbjct: 1201 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1258
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1259 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1306
>gi|23306233|emb|CAD43080.2| DNA methyltransferase 1d [Paracentrotus lividus]
Length = 1429
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + + +N I ++ ++ +P++ L+ENV
Sbjct: 1204 LPQKGDVELLCGGPPCQGFSGMNRFNSRE--YSKFKNSLISSYLSYCDYYRPRFFLLENV 1261
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + K + + AL L+ M YQ FGI+ AG YG+PQ R R
Sbjct: 1262 RNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVPQTRRR 1305
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 91/231 (39%), Gaps = 19/231 (8%)
Query: 60 YIKGEGTQK----HIGKILEFFKTTDGEEY-FRVQWFYRAEDTVMKEAADFH-DRKRLFY 113
Y+KG + +GKI+ + T RV YR EDT A + D L++
Sbjct: 975 YVKGSNLECPEPFRVGKIISIYTTKSSSTVRLRVNKMYRPEDTHKGRTAAYQADLNVLYW 1034
Query: 114 STVMNDNPVDCIISK--VIVAQIPPKIGLKSNSIPSSDFYFDMEY-----CVEYSTFRTL 166
S ++ + K V+ A+ + ++ FYF Y C E ++
Sbjct: 1035 SEEEAVTELEVVQGKCSVVCAEDLNVSTTEYSAGGPHKFYFREAYDSERKCFEDPPSKSR 1094
Query: 167 LTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAK 226
T + A E P +L LD+++GCGG+S G
Sbjct: 1095 STRMKGKGKGKGKGKAKGKMAVEKEEEKESTETPFN-KLKCLDVFAGCGGLSEGFHQAGI 1153
Query: 227 LSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQKLCK 277
+ WA++ ++ A ++ +LN+P + V ++ + L LV + +K +
Sbjct: 1154 CESS-----WAIEKEEPAAQAYRLNNPGSTVFSDDCNELLRLVMQGEKTSR 1199
>gi|390363610|ref|XP_003730410.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like
[Strongylocentrotus purpuratus]
Length = 1618
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + + +N I ++ ++ +P++ L+ENV
Sbjct: 1209 LPQKGDVELLCGGPPCQGFSGMNRFNSRE--YSKFKNSLISSYLSYCDYYRPRFFLLENV 1266
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + K + + AL L+ M YQ FGI+ AG YG+PQ R R
Sbjct: 1267 RNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVPQTRRR 1310
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
+L LD+++GCGG+S G + WA++ ++ A ++ +LN+P + V ++
Sbjct: 1136 KLKCLDVFAGCGGLSEGFHQAGICESS-----WAIEKEEPAAQAFRLNNPGSTVFSDDCN 1190
Query: 264 DFLELVKEWQKLCK 277
+ L LV + K +
Sbjct: 1191 ELLRLVMQGDKTSR 1204
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 32 EDKIVSNVECHYAQARIGECIFDLGDCAYIKGEGTQK--HIGKILEFFKTTDGEEYFRVQ 89
E + V+ Y A I + + GDC I + K I +++ ++ +DGE F Q
Sbjct: 732 EPEEVTKDRAFYKAAMIDDQKIENGDCVQIHPDDPTKPLFIARVIYMWQDSDGEMMFHAQ 791
Query: 90 WFYRAEDTVMKEAAD 104
WF +TV+ EA+D
Sbjct: 792 WFVYGSETVLGEASD 806
>gi|72091983|ref|XP_780273.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like isoform 1
[Strongylocentrotus purpuratus]
Length = 1618
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + + +N I ++ ++ +P++ L+ENV
Sbjct: 1209 LPQKGDVELLCGGPPCQGFSGMNRFNSRE--YSKFKNSLISSYLSYCDYYRPRFFLLENV 1266
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + K + + AL L+ M YQ FGI+ AG YG+PQ R R
Sbjct: 1267 RNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVPQTRRR 1310
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
+L LD+++GCGG+S G + WA++ ++ A ++ +LN+P + V ++
Sbjct: 1136 KLKCLDVFAGCGGLSEGFHQAGICESS-----WAIEKEEPAAQAFRLNNPGSTVFSDDCN 1190
Query: 264 DFLELVKEWQKLCK 277
+ L LV + K +
Sbjct: 1191 ELLRLVMQGDKTSR 1204
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 32 EDKIVSNVECHYAQARIGECIFDLGDCAYIKGEGTQK--HIGKILEFFKTTDGEEYFRVQ 89
E + V+ Y A I + + GDC I + K I +++ ++ +DGE F Q
Sbjct: 732 EPEEVTKDRAFYKAAMIDDQKIENGDCVQIHPDDPTKPLFIARVIYMWQDSDGEMMFHAQ 791
Query: 90 WFYRAEDTVMKEAAD 104
WF +TV+ EA+D
Sbjct: 792 WFVYGSETVLGEASD 806
>gi|12230342|sp|Q27746.1|DNMT1_PARLI RecName: Full=DNA (cytosine-5)-methyltransferase PliMCI; AltName:
Full=DNA methyltransferase PliMCI; Short=DNA MTase
PliMCI; Short=M.PliMCI; AltName: Full=Dnmt1; AltName:
Full=MCMT
gi|1004286|emb|CAA90563.1| DNA (cytosine-5-)-methyltransferase [Paracentrotus lividus]
Length = 1612
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + + +N I ++ ++ +P++ L+ENV
Sbjct: 1203 LPQKGDVELLCGGPPCQGFSGMNRFNSRE--YSKFKNSLISSYLSYCDYYRPRFFLLENV 1260
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + K + + AL L+ M YQ FGI+ AG YG+PQ R R
Sbjct: 1261 RNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVPQTRRR 1304
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 95/234 (40%), Gaps = 25/234 (10%)
Query: 60 YIKGEGTQK----HIGKILEFFKT-TDGEEYFRVQWFYRAEDTVMKEAADFH-DRKRLFY 113
Y+KG + IGKI+ + T ++ RV YR EDT A + D L++
Sbjct: 974 YVKGSNLECPEPFRIGKIISIYTTKSNSTVRLRVNKMYRPEDTHKGRTAAYQADLNVLYW 1033
Query: 114 STVMNDNPVDCIISK--VIVAQIPPKIGLKSNSIPSS---DFYFDMEY-----CVEYSTF 163
S ++ + K V+ A+ + + ++ + FYF Y C E
Sbjct: 1034 SEEEAVTELEVVQGKCSVVCAE---DLNVSTDEYSAGGPHKFYFREAYDSERKCFEDPPS 1090
Query: 164 RTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGMSTGLCL 223
++ T + A E P +L LD+++GCGG+S G
Sbjct: 1091 KSRSTRMKGKGKGKGKGKAKGKIAVEKEEEKESTETPFN-KLKCLDVFAGCGGLSEGFHQ 1149
Query: 224 GAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQKLCK 277
+ WA++ ++ A ++ +LN+P + V ++ + L LV + +K +
Sbjct: 1150 AGICESS-----WAIEKEEPAAQAYRLNNPGSTVFSDDCNELLRLVMQGEKTSR 1198
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 31 DEDKIVSNVECHYAQARIGECIFDLGDCAYIKGEGTQK--HIGKILEFFKTTDGEEYFRV 88
DE V+ +Y A + + ++GDC I + K + +++ ++ + GE F
Sbjct: 723 DEPTEVTEERAYYKAAMLDDEKIEIGDCVLIHPDDPTKPLFMARVIYMWQESQGEMMFHA 782
Query: 89 QWFYRAEDTVMKEAAD 104
QWF +TV+ E +D
Sbjct: 783 QWFVYGSETVLGETSD 798
>gi|355684539|gb|AER97432.1| DNA -methyltransferase 1 [Mustela putorius furo]
Length = 939
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P+Y L
Sbjct: 531 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 588
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 589 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 636
>gi|345786497|ref|XP_533919.3| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Canis lupus
familiaris]
Length = 1611
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P+Y L
Sbjct: 1204 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1261
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1262 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1309
>gi|23306234|emb|CAD43089.1| DNA methyltransferase 1e [Paracentrotus lividus]
Length = 1335
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + + +N I ++ ++ +P++ L+ENV
Sbjct: 1204 LPQKGDVELLCGGPPCQGFSGMNRFNSRE--YSKFKNSLISSYLSYCDYYRPRFFLLENV 1261
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + K + + AL L+ M YQ FGI+ AG YG+PQ R R
Sbjct: 1262 RNFVSYKKNMVLKLALRCLIRMGYQCTFGILQAGQYGVPQTRRR 1305
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 91/231 (39%), Gaps = 19/231 (8%)
Query: 60 YIKGEGTQK----HIGKILEFFKTTDGEEY-FRVQWFYRAEDTVMKEAADFH-DRKRLFY 113
Y+KG + +GKI+ + T RV YR EDT A + D L++
Sbjct: 975 YVKGSNLECPEPFRVGKIISIYTTKSSSTVRLRVNKMYRPEDTHKGRTAAYQADLNVLYW 1034
Query: 114 STVMNDNPVDCIISK--VIVAQIPPKIGLKSNSIPSSDFYFDMEY-----CVEYSTFRTL 166
S ++ + K V+ A+ + ++ FYF Y C E ++
Sbjct: 1035 SEEEAVTELEVVQGKCSVVCAEDLNVSTTEYSAGGPHKFYFREAYDSERKCFEDPPSKSR 1094
Query: 167 LTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAK 226
T + A E P +L LD+++GCGG+S G
Sbjct: 1095 STRMKGKGKGKGKGKAKGKMAVEKEEEKESTETPFN-KLKCLDVFAGCGGLSEGFHQAGI 1153
Query: 227 LSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQKLCK 277
+ WA++ ++ A ++ +LN+P + V ++ + L LV + +K +
Sbjct: 1154 CESS-----WAIEKEEPAAQAYRLNNPGSTVFSDDCNELLRLVMQGEKTSR 1199
>gi|307111085|gb|EFN59320.1| hypothetical protein CHLNCDRAFT_137705 [Chlorella variabilis]
Length = 1369
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 64/104 (61%), Gaps = 8/104 (7%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG+VD ICGGPPCQG SG NRF ++ N +V ++ FL P+Y L+ENV
Sbjct: 1017 LPLPGEVDFICGGPPCQGYSGMNRF--------NKGNWSMVQNSMVMAFLSPRYFLLENV 1068
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + +K+ R + L+ M YQ RFG++ AG +G+ Q R R
Sbjct: 1069 RNFVSHNKSFTFRLTVRSLLDMGYQVRFGVLNAGNFGVAQSRKR 1112
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 205 LALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
LA +D+++GCGG+S G+ V++W ++ ++ A + ++N+P+A V
Sbjct: 927 LATMDIFAGCGGLSEGMH-----QAGAAVSKWGIEYERPAAAAFEVNNPQAAV 974
>gi|301772046|ref|XP_002921451.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Ailuropoda melanoleuca]
Length = 1676
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P+Y L
Sbjct: 1267 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1324
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1325 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1372
>gi|156739999|gb|ABU93584.1| DNA cytosine 5-methyltransferase 1 [Ovis aries]
Length = 1572
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P+Y L
Sbjct: 1174 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1231
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1232 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1279
>gi|431918990|gb|ELK17857.1| DNA (cytosine-5)-methyltransferase 1 [Pteropus alecto]
Length = 1535
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P+Y L
Sbjct: 1149 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1206
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1207 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1254
>gi|338727207|ref|XP_001916472.2| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Equus caballus]
Length = 1619
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P+Y L
Sbjct: 1210 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1267
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1268 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1315
>gi|317108162|ref|NP_872592.2| DNA (cytosine-5)-methyltransferase 1 [Bos taurus]
gi|108935977|sp|Q24K09.1|DNMT1_BOVIN RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1
gi|89994055|gb|AAI14064.1| DNA (cytosine-5-)-methyltransferase 1 [Bos taurus]
gi|296485884|tpg|DAA27999.1| TPA: DNA (cytosine-5)-methyltransferase 1 [Bos taurus]
Length = 1611
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P+Y L
Sbjct: 1204 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1261
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1262 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1309
>gi|440891547|gb|ELR45163.1| DNA (cytosine-5)-methyltransferase 1 [Bos grunniens mutus]
Length = 1618
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P+Y L
Sbjct: 1204 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1261
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1262 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1309
>gi|168805279|gb|ACA28713.1| DNA methyltransferase b [Bos taurus]
Length = 1348
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P+Y L
Sbjct: 923 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 980
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 981 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1028
>gi|57164173|ref|NP_001009473.1| DNA (cytosine-5)-methyltransferase 1 [Ovis aries]
gi|29536011|gb|AAO39704.1| DNA (cytosine-5)-methyltransferase 1 [Ovis aries]
Length = 1611
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P+Y L
Sbjct: 1204 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1261
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1262 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1309
>gi|350422372|ref|XP_003493144.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Bombus
impatiens]
Length = 1368
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP G V+++CGGPPCQG SG NRF + L +N +V ++ ++ +P + +MENV
Sbjct: 966 LPQKGQVELLCGGPPCQGFSGMNRFNSRQYSL--FKNSLVVSYLSYCDYYRPNFFIMENV 1023
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FGI+ AG YG+PQ R R
Sbjct: 1024 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGILQAGNYGVPQTRRR 1067
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 33 DKIVSN-VECHYAQARIGECIFDLGDCAYI--KGEGTQKHIGKILEFFKTTDGEEYFRVQ 89
D+I SN ++ Y +G+ ++ D + + H+ K++ ++ +G + F
Sbjct: 480 DQIASNNLKTFYKSVIVGDEKIEINDYVLVEPRNPAIPSHVAKVIYMWENKNGIKQFHAN 539
Query: 90 WFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISK--VIVAQIP 135
W +R DT++ E +D + LF S +D P + SK VI +P
Sbjct: 540 WLHRGNDTILGETSDPIE---LFLSDDCDDVPFKSVRSKCTVIFKNVP 584
>gi|37728049|gb|AAO44952.1| cytosine-5-methyltransferase [Bos taurus]
Length = 1611
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P+Y L
Sbjct: 1204 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1261
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1262 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1309
>gi|222840488|gb|ACM68681.1| DNA methyltransferase 1 [Capra hircus]
Length = 1420
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P+Y L
Sbjct: 1131 RGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFL 1188
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1189 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1236
>gi|260806879|ref|XP_002598311.1| hypothetical protein BRAFLDRAFT_204680 [Branchiostoma floridae]
gi|229283583|gb|EEN54323.1| hypothetical protein BRAFLDRAFT_204680 [Branchiostoma floridae]
Length = 1275
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ +F +PK+ L+ENV
Sbjct: 871 LPQKGDVELLCGGPPCQGFSGMNRFNS--RQYSQFKNSLVVSFLSYCDFYRPKFFLLENV 928
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F + + + L L+ M YQ FG++ AG YG+ Q R R
Sbjct: 929 RNFVSFKSSMVLKLTLRCLIRMGYQCTFGVLQAGNYGVAQTRRR 972
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 200 PHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRN 259
P +L +LD+++GCGG+S G ++WA++ + A ++ +LN+P+ V
Sbjct: 794 PAFTKLRMLDVFAGCGGLSEGFHQAGIAD-----SKWAVEVMEPAAQAYRLNNPDCTVFT 848
Query: 260 EAAEDFLELVKE 271
+ L+LV E
Sbjct: 849 DDCNILLKLVME 860
>gi|283549178|ref|NP_001164522.1| DNA methyltransferase 1a [Apis mellifera]
Length = 1366
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP G V+++CGGPPCQG SG NRF + L +N +V ++ ++ +P + +MENV
Sbjct: 967 LPQKGQVELLCGGPPCQGFSGMNRFNSRQYSL--FKNSLVVSYLSYCDYYRPNFFIMENV 1024
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L L+ M YQ FGI+ AG YG+PQ R R
Sbjct: 1025 RNFVSFKRSMVLKLTLRCLIRMGYQCTFGILQAGNYGIPQTRRR 1068
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
+L LD+++GCGG+S GL NL WA++ ++SA + +LN+P A V E
Sbjct: 894 KLKTLDVFAGCGGLSEGLHQAG--VAENL---WAIEKEESAAYAYRLNNPNATVFIEDCN 948
Query: 264 DFLELV 269
L+ V
Sbjct: 949 VLLKKV 954
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Query: 33 DKIVS-NVECHYAQARIGECIFDLGDCAYI--KGEGTQKHIGKILEFFKTTDGEEYFRVQ 89
D+I + N++ +Y +G+ + D + + H+ K++ ++ +G + F
Sbjct: 481 DQIANDNLKTYYKSVIVGDEEIGINDYVLVEPRNPAIPSHVAKVIYMWENKNGIKQFHAN 540
Query: 90 WFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSD 149
W +R DT++ E + D LF S +D P + SK V I +I N + + D
Sbjct: 541 WLHRGNDTILGETS---DPIELFLSDDCDDIPFKSVRSKCTV--IFKEIQKNWNELGNMD 595
Query: 150 FYFD 153
F+
Sbjct: 596 LNFE 599
>gi|340719551|ref|XP_003398214.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Bombus
terrestris]
Length = 1442
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP G+V+++CGGPPCQG SG NRF + L +N +V + ++ +PK+ +MENV
Sbjct: 1041 LPQKGEVELLCGGPPCQGFSGMNRFNSRQYSL--FKNSLVVSCLSYCDYYRPKFFIMENV 1098
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L L+ M YQ FGI+ AG YG+PQ R R
Sbjct: 1099 RNFVSFKRSMVLKLTLRCLLRMGYQCTFGILQAGNYGIPQTRRR 1142
>gi|350410581|ref|XP_003489082.1| PREDICTED: DNA (cytosine-5)-methyltransferase PliMCI-like [Bombus
impatiens]
Length = 1441
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP G+V+++CGGPPCQG SG NRF + L +N + + ++ +PK+ +MENV
Sbjct: 1040 LPQKGEVELLCGGPPCQGFSGMNRFNSRQYSL--FKNSLVASCLSYCDYYRPKFFIMENV 1097
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FGI+ AG YG+PQ R R
Sbjct: 1098 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGILQAGNYGIPQTRRR 1141
>gi|327284227|ref|XP_003226840.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Anolis
carolinensis]
Length = 1553
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1148 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1205
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1206 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1249
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 93/240 (38%), Gaps = 36/240 (15%)
Query: 60 YIKGEGTQK----HIGKILEFF-------KTTDGEEYFRVQWFYRAEDTVMKEAADFHDR 108
YIKG IG+I E + + + E RV YR E+T A +H
Sbjct: 912 YIKGSNQDAPEPYRIGRIKEIYCNIRSSGRPNEAEIKLRVYKLYRPENTHKSVKASYHAD 971
Query: 109 KRLFY------STVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSD-FYFDMEYCVEYS 161
L Y S D C + V + I + S SSD FYF Y +
Sbjct: 972 INLLYWSDEEASVEFKDVQGRCTV--VYGEDLTENI--QDYSASSSDRFYFLEAYNAKTK 1027
Query: 162 TF-------RTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGC 214
TF R+ ++ +TA+ P K L LD++SGC
Sbjct: 1028 TFEDPPYHARSSGNKGKGKGKGKGKSKGKSSTASEHSEHEAAKMKPPK--LRSLDVFSGC 1085
Query: 215 GGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQK 274
GG+S G A++S T WA++ + A ++ +LN+P V E L+LV +K
Sbjct: 1086 GGLSEGF-HQAEVS----ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEK 1140
>gi|2952279|gb|AAC05485.1| chromomethylase CMT1 [Brassica oleracea var. italica]
Length = 62
Score = 90.9 bits (224), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/61 (60%), Positives = 53/61 (86%)
Query: 437 SGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRL 496
SG+NRFRN +PL+DE+N+Q++++M+I+++LKP YVLMENVVD+LKF K RYA++RL
Sbjct: 1 SGFNRFRNNKAPLEDEKNQQLLVYMNIIDYLKPNYVLMENVVDLLKFSKGFCARYAVARL 60
Query: 497 V 497
V
Sbjct: 61 V 61
>gi|395512631|ref|XP_003760539.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Sarcophilus
harrisii]
Length = 1486
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1081 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1138
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1139 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1182
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
+L LD++SGCGG+S G A +S T WA++ + A ++ +LN+P V E
Sbjct: 1008 KLRTLDVFSGCGGLSEGF-HQAGIS----ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCN 1062
Query: 264 DFLELVKEWQK 274
L+LV +K
Sbjct: 1063 VLLKLVMSGEK 1073
>gi|354475153|ref|XP_003499794.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Cricetulus griseus]
Length = 1621
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1216 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSTFKNSLVVSFLSYCDYYRPRFFLLENV 1273
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1274 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1317
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
+L LD++SGCGG+S G A +S T WA++ A ++ +LN+P + V E
Sbjct: 1143 KLRTLDVFSGCGGLSEGF-HQAGIS----ETLWAIEMWDPAAQAFRLNNPSSTVFTEDCN 1197
Query: 264 DFLELV 269
L+LV
Sbjct: 1198 VLLKLV 1203
>gi|74136491|ref|NP_001028141.1| DNA (cytosine-5)-methyltransferase 1 [Monodelphis domestica]
gi|22023943|gb|AAM89258.1|AF527541_1 cytosine-5-methyltransferase [Monodelphis domestica]
Length = 1514
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1109 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1166
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1167 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1210
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
+L LD++SGCGG+S G A +S T WA++ + A ++ +LN+P V E
Sbjct: 1036 KLRTLDVFSGCGGLSEGF-HQAGIS----ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCN 1090
Query: 264 DFLELVKEWQK 274
L+LV +K
Sbjct: 1091 VLLKLVMSGEK 1101
>gi|344240107|gb|EGV96210.1| DNA (cytosine-5)-methyltransferase 1 [Cricetulus griseus]
Length = 1494
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1207 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSTFKNSLVVSFLSYCDYYRPRFFLLENV 1264
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1265 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1308
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
+L LD++SGCGG+S G A +S T WA++ A ++ +LN+P + V E
Sbjct: 1134 KLRTLDVFSGCGGLSEGF-HQAGIS----ETLWAIEMWDPAAQAFRLNNPSSTVFTEDCN 1188
Query: 264 DFLELV 269
L+LV
Sbjct: 1189 VLLKLV 1194
>gi|355755438|gb|EHH59185.1| DNA (cytosine-5)-methyltransferase 1 [Macaca fascicularis]
Length = 1541
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1132 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1189
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1190 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1237
>gi|344282771|ref|XP_003413146.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 1 [Loxodonta
africana]
Length = 1611
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1202 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1259
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1260 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1307
>gi|403296174|ref|XP_003938993.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Saimiri boliviensis
boliviensis]
Length = 1683
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1275 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1332
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1333 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1380
>gi|40538748|ref|NP_571264.1| DNA (cytosine-5)-methyltransferase 1 [Danio rerio]
gi|19263095|gb|AAL86596.1|AF483203_1 DNA (cytosine-5)-methyltransferase [Danio rerio]
Length = 1499
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V ++ ++ +PK+ L+ENV
Sbjct: 1094 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSYLSYCDYYRPKFFLLENV 1151
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1152 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1195
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 92/233 (39%), Gaps = 24/233 (10%)
Query: 60 YIKGEGTQK----HIGKILEFF--KTTDG-----EEYFRVQWFYRAEDTVMKEAADFH-D 107
YIKG IG+I E F K ++G E R+ FYR E+T +H D
Sbjct: 860 YIKGSNLDAPQPFRIGRIKEIFCNKRSNGKPDTTEIKLRLYKFYRPENTHKGPKGAYHSD 919
Query: 108 RKRLFYSTVMNDNPVDCIISKVIVA---QIPPKIGLKSNSIPSSDFYFDMEYCVEYSTFR 164
+L++S + ++++ V + + SN P FYF Y + +F
Sbjct: 920 INQLYWSDEEATVSMTEVLTRCRVEYAEDLVESVQDYSNKGPDR-FYFLEAYNAKTKSFE 978
Query: 165 ---TLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGMSTGL 221
++ + + P +L LD++SGCGG+S G
Sbjct: 979 DPPNHARSAVNKGKGKGKGKGKGKGKQRSRTTGSGAQEPVVPKLRTLDVFSGCGGLSEGF 1038
Query: 222 CLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQK 274
A +S T WA++ A ++ +LN+P V E L+LV +K
Sbjct: 1039 -HQAGIS----ETHWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEK 1086
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 42 HYAQARIGECIFDLGDCAYIKGEGTQK--HIGKILEFFKTTDGEEYFRVQWFYRAEDTVM 99
+Y + R+ + ++GDC + + ++ +I + DGE+ F WF R DTV+
Sbjct: 626 YYMKVRVENEVLEVGDCVSVSPDDPSHPLYLARITALWD--DGEKMFHAHWFCRGTDTVL 683
Query: 100 KEAAD 104
E++D
Sbjct: 684 GESSD 688
>gi|344282773|ref|XP_003413147.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 2 [Loxodonta
africana]
Length = 1625
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1216 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1273
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1274 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1321
>gi|441628422|ref|XP_003275776.2| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 1
isoform 1 [Nomascus leucogenys]
Length = 1616
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1207 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1264
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1265 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1312
>gi|395851079|ref|XP_003798094.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Otolemur garnettii]
Length = 1620
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1211 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1268
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1269 LENVRNFVSFKRSMVLKLTLCCLVRMGYQCTFGVLQAGQYGVAQTRRR 1316
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 83/226 (36%), Gaps = 22/226 (9%)
Query: 60 YIKGEGTQK----HIGKILEFF-------KTTDGEEYFRVQWFYRAEDTVMKEAADFHDR 108
YIKG IG+I E F K + + R+ FYR E+T A +H
Sbjct: 983 YIKGSNLDAPEPYRIGRIKEIFCPKKSNGKPNEADIKIRLNKFYRPENTHKSTPASYHAD 1042
Query: 109 KRLFY----STVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDFYFDMEYCVEYSTFR 164
L Y V++ V + +P + S P FYF Y + +F
Sbjct: 1043 INLLYWSDEEAVVDFKAVQGRCAVEYGEDLPQCVQDYSTGGPDR-FYFLEAYNAKSKSFE 1101
Query: 165 TLLT-GKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGMSTGLCL 223
+ + + T + P +L LD++SGCGG+S G
Sbjct: 1102 DPPNHARSPGNKGKGKGKGKGKPKSQTCEPSEPETEIKLPKLRTLDVFSGCGGLSEGFHQ 1161
Query: 224 GAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELV 269
T WA++ A ++ +LN+P + V E L+LV
Sbjct: 1162 AGVSE-----TLWAIEMWDPAAQAFRLNNPGSTVFTEDCNVLLKLV 1202
>gi|190338613|gb|AAI63894.1| Dnmt1 protein [Danio rerio]
Length = 1500
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V ++ ++ +PK+ L+ENV
Sbjct: 1095 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSYLSYCDYYRPKFFLLENV 1152
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1153 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1196
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 91/234 (38%), Gaps = 25/234 (10%)
Query: 60 YIKGEGTQK----HIGKILEFF--KTTDG-----EEYFRVQWFYRAEDTVMKEAADFH-D 107
YIKG IG+I E F K ++G E R+ FYR E+T +H D
Sbjct: 860 YIKGSNLDAPQPFRIGRIKEIFCNKRSNGKPDTTEIKLRLYKFYRPENTHKGPKGAYHSD 919
Query: 108 RKRLFYSTVMNDNPVDCIISKVIVA---QIPPKIGLKSNSIPSSDFYFDMEYCVEYSTFR 164
+L++S + ++++ V + + SN P FYF Y + +F
Sbjct: 920 INQLYWSDEEATVSMTEVLTRCRVEYAEDLVESVQDYSNKGPDR-FYFLEAYNAKTKSFE 978
Query: 165 TLLTGKIHDLSLPSCTETVPTTATSTFFENMPN----HGPHKAELALLDLYSGCGGMSTG 220
++ P P +L LD++SGCGG+S G
Sbjct: 979 DPPNHARSAVNKGKGKGKGKGKGKGKAAPQEPQDQEAQEPAVPKLRTLDVFSGCGGLSEG 1038
Query: 221 LCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQK 274
A +S T WA++ A ++ +LN+P V E L+LV +K
Sbjct: 1039 F-HQAGIS----ETHWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEK 1087
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 42 HYAQARIGECIFDLGDCAYIKGEGTQK--HIGKILEFFKTTDGEEYFRVQWFYRAEDTVM 99
+Y + R+ + ++GDC + + ++ +I + DGE+ F WF R DTV+
Sbjct: 626 YYMKVRVENEVLEVGDCVSVSPDDPSHPLYLARITALWD--DGEKMFHAHWFCRGTDTVL 683
Query: 100 KEAAD 104
E++D
Sbjct: 684 GESSD 688
>gi|62088406|dbj|BAD92650.1| DNA (cytosine-5-)-methyltransferase 1 variant [Homo sapiens]
Length = 1606
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1194 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1251
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1252 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1299
>gi|46048774|ref|NP_996835.1| DNA (cytosine-5)-methyltransferase 1 [Gallus gallus]
gi|12230343|sp|Q92072.1|DNMT1_CHICK RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
AltName: Full=DNA methyltransferase GgaI; Short=DNA MTase
GgaI; Short=M.GgaI; AltName: Full=MCMT
gi|1109610|dbj|BAA07867.1| DNA (cytosine-5-)-methyltransferase [Gallus gallus]
gi|1096715|prf||2112268A DNA methyltransferase
Length = 1537
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1126 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1183
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1184 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1227
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 81/234 (34%), Gaps = 24/234 (10%)
Query: 60 YIKGEGTQK----HIGKILEFF-------KTTDGEEYFRVQWFYRAEDTVMKEAADFHDR 108
YIKG +G+I E F K + + R+ FYR E+T A +H
Sbjct: 890 YIKGSNLDAPDPYRVGRIKEIFCHIRTNGKPNEADIKLRIWKFYRPENTHKSMKATYHAD 949
Query: 109 KRLFYSTVMNDNPVDCIISK--VIVAQIPPKIGLKSNSIPSSD-FYFDMEYCVEYSTFRT 165
L Y + C + +V ++ S D FYF Y + +F
Sbjct: 950 INLLYWSDEETTVDFCAVQGRCTVVYGEDLTESIQDYSAGGLDRFYFLEAYNAKTKSFED 1009
Query: 166 LLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELAL-----LDLYSGCGGMSTG 220
+ P EL L LD++SGCGG+S G
Sbjct: 1010 PPNHARSSGNKGKGKGKGKGKGKGKSSTTCEQSEPEPTELKLPKLRTLDVFSGCGGLSEG 1069
Query: 221 LCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQK 274
T WA++ + A ++ +LN+P V E L+LV +K
Sbjct: 1070 FHQAGVSE-----TLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEK 1118
>gi|4503351|ref|NP_001370.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Homo sapiens]
gi|12231019|sp|P26358.2|DNMT1_HUMAN RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
AltName: Full=CXXC-type zinc finger protein 9; AltName:
Full=DNA methyltransferase HsaI; Short=DNA MTase HsaI;
Short=M.HsaI; AltName: Full=MCMT
gi|1632819|emb|CAA45219.1| DNA (cytosine-5-)-methyltransferase [Homo sapiens]
Length = 1616
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1207 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1264
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1265 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1312
>gi|410226626|gb|JAA10532.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
gi|410308690|gb|JAA32945.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
Length = 1616
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1207 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1264
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1265 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1312
>gi|6684525|gb|AAF23609.1| DNA (cytosine-5)-methyltransferase [Homo sapiens]
Length = 1280
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 871 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 928
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 929 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 976
>gi|355703123|gb|EHH29614.1| DNA (cytosine-5)-methyltransferase 1 [Macaca mulatta]
Length = 1632
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1223 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1280
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1281 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1328
>gi|332852917|ref|XP_512361.3| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 11 [Pan
troglodytes]
gi|410226624|gb|JAA10531.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
gi|410308688|gb|JAA32944.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
Length = 1632
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1223 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1280
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1281 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1328
>gi|62204780|gb|AAH92517.1| DNMT1 protein [Homo sapiens]
Length = 1511
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1102 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1159
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1160 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1207
>gi|411012957|gb|AFV99135.1| CMT-type cytosine DNA-methyltransferase 3a [Malus x domestica]
Length = 372
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 85/186 (45%), Gaps = 39/186 (20%)
Query: 62 KGEGTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNP 121
+GE + +I KI+E F+ G YF QW+YR++DTV+K A
Sbjct: 199 RGETKEPYICKIVEMFEAIGGLLYFTAQWYYRSQDTVIKHCAS----------------- 241
Query: 122 VDCIISKVIVAQIPPKIGLKSNSIPSSDFYFDMEYCVEYSTFRTLLTG------KIHDLS 175
V + + KS SIP ++Y D +Y + YSTF L TG HD
Sbjct: 242 -------VACGHVDQDV--KSKSIPVCNYYCDTKYLLPYSTFVNLQTGYCSLSTYCHDAE 292
Query: 176 LPSCTETVPTTAT-------STFFENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLS 228
+ T + S + N K+++ LLDLYSGCG MSTGLCL A L+
Sbjct: 293 IMQSGSDDSTISVSDDVCLDSEVDSKLSNGVCAKSQVRLLDLYSGCGVMSTGLCLAAHLA 352
Query: 229 CTNLVT 234
NLVT
Sbjct: 353 NVNLVT 358
>gi|343197726|pdb|3SWR|A Chain A, Structure Of Human Dnmt1 (601-1600) In Complex With
Sinefungin
Length = 1002
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 609 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 666
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 667 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 714
>gi|395750441|ref|XP_002828696.2| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 1
[Pongo abelii]
Length = 1602
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1193 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1250
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1251 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1298
>gi|190337769|gb|AAI63893.1| Dnmt1 protein [Danio rerio]
Length = 1500
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V ++ ++ +PK+ L+ENV
Sbjct: 1095 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSYLSYCDYYRPKFFLLENV 1152
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1153 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1196
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 91/234 (38%), Gaps = 25/234 (10%)
Query: 60 YIKGEGTQK----HIGKILEFF--KTTDG-----EEYFRVQWFYRAEDTVMKEAADFH-D 107
YIKG IG+I E F K ++G E R+ FYR E+T +H D
Sbjct: 860 YIKGSNLDAPQPFRIGRIKEIFCNKRSNGKPDTTEIKLRLYKFYRPENTHKGPKGAYHSD 919
Query: 108 RKRLFYSTVMNDNPVDCIISKVIVA---QIPPKIGLKSNSIPSSDFYFDMEYCVEYSTFR 164
+L++S + ++++ V + + SN P FYF Y + +F
Sbjct: 920 INQLYWSDEEATVSMTEVLTRCRVEYAEDLVESVQDYSNKGPDR-FYFLEAYNAKTKSFE 978
Query: 165 TLLTGKIHDLSLPSCTETVPTTATSTFFENMPN----HGPHKAELALLDLYSGCGGMSTG 220
++ P P +L LD++SGCGG+S G
Sbjct: 979 DPPNHARSAVNKGKGKGKGKGKGKGKAAPQEPQDQEAQEPAVPKLRTLDVFSGCGGLSEG 1038
Query: 221 LCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQK 274
A +S T WA++ A ++ +LN+P V E L+LV +K
Sbjct: 1039 F-HQAGIS----ETHWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEK 1087
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 42 HYAQARIGECIFDLGDCAYIKGEGTQK--HIGKILEFFKTTDGEEYFRVQWFYRAEDTVM 99
+Y + R+ + ++GDC + + ++ +I + DGE+ F WF R DTV+
Sbjct: 626 YYMKVRVENEVLEVGDCVSVSPDDPSHPLYLARITALWD--DGEKMFHAHWFCRGTDTVL 683
Query: 100 KEAAD 104
E++D
Sbjct: 684 GESSD 688
>gi|195927037|ref|NP_001124295.1| DNA (cytosine-5)-methyltransferase 1 isoform a [Homo sapiens]
gi|116496659|gb|AAI26228.1| DNMT1 protein [Homo sapiens]
gi|219521538|gb|AAI44094.1| DNA (cytosine-5-)-methyltransferase 1 [Homo sapiens]
Length = 1632
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1223 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1280
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1281 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1328
>gi|410226628|gb|JAA10533.1| DNA (cytosine-5-)-methyltransferase 1 [Pan troglodytes]
Length = 1635
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1223 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1280
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1281 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1328
>gi|383408753|gb|AFH27590.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Macaca mulatta]
Length = 1616
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1207 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1264
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1265 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1312
>gi|168277642|dbj|BAG10799.1| DNA (cytosine-5)-methyltransferase 1 [synthetic construct]
Length = 1498
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1086 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1143
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1144 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1191
>gi|410053162|ref|XP_003953403.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Pan troglodytes]
Length = 1511
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1102 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1159
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1160 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1207
>gi|315583650|pdb|3PTA|A Chain A, Crystal Structure Of Human Dnmt1(646-1600) In Complex With
Dna
Length = 956
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 563 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 620
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 621 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 668
>gi|297276085|ref|XP_001104704.2| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Macaca mulatta]
Length = 1280
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 871 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 928
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 929 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 976
>gi|426387162|ref|XP_004060043.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Gorilla gorilla
gorilla]
Length = 1790
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1381 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1438
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1439 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1486
>gi|383416291|gb|AFH31359.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Macaca mulatta]
Length = 1619
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1207 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1264
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1265 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1312
>gi|380786361|gb|AFE65056.1| DNA (cytosine-5)-methyltransferase 1 isoform b [Macaca mulatta]
Length = 1616
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1207 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1264
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1265 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1312
>gi|182765469|ref|NP_001116832.1| uncharacterized protein LOC100036795 [Xenopus laevis]
gi|171846414|gb|AAI61682.1| LOC100036795 protein [Xenopus laevis]
Length = 1492
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 88/170 (51%), Gaps = 22/170 (12%)
Query: 371 SGKRGLNFKVHWKGYSTSE---DSWEPI-EGLR-----------NCPERIKEFVRNGFKS 415
SG GL+ H G S + + WEP + R +C +K V +G K+
Sbjct: 1023 SGCGGLSEGFHQAGISETNWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLK-LVMSGEKT 1081
Query: 416 ----KILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKY 471
+ LP GDV+++CGGPPCQG SG NRF + +N +V ++ ++ +PK+
Sbjct: 1082 NSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSYLSYCDYYRPKF 1139
Query: 472 VLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L+ENV + + F + + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1140 FLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1189
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 96/237 (40%), Gaps = 32/237 (13%)
Query: 60 YIKGEGTQK----HIGKILEFF-------KTTDGEEYFRVQWFYRAEDTVMKEAADFHDR 108
YIKG +G+I E F K + + R+ FYR E+T A +H
Sbjct: 854 YIKGSNLDAPEPYRLGRIKEIFCNKRSNGKPNEADIKLRIYKFYRPENTHKGMKASYHSD 913
Query: 109 KRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLK-SNSIP------SSDFYFDMEYCVEYS 161
+ Y + + + KV+ + G + SI S+ FYF Y +
Sbjct: 914 VNMVYWS----DEEAVVEFKVVQGHCTVEYGEDLTESIQDYSAGGSNRFYFLEAYNAKTK 969
Query: 162 TFRT----LLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGM 217
+F + I T ++ + E + N G +L LD++SGCGG+
Sbjct: 970 SFEDPPNHARSAVIKGKGKGKGKGKGKTLSSKSENEQI-NSGDKLPKLRTLDVFSGCGGL 1028
Query: 218 STGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQK 274
S G A +S TN WA++ + A ++ +LN+P V E L+LV +K
Sbjct: 1029 SEGF-HQAGISETN----WAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEK 1080
>gi|193783730|dbj|BAG53712.1| unnamed protein product [Homo sapiens]
Length = 540
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 131 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 188
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 189 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 236
>gi|397476607|ref|XP_003809690.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Pan paniscus]
Length = 1631
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1222 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1279
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1280 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1327
>gi|348550184|ref|XP_003460912.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Cavia porcellus]
Length = 1681
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1207 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1264
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1265 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1308
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 35/113 (30%)
Query: 187 ATSTFFENMPNHG-----------------------PHKAELAL-------LDLYSGCGG 216
A S FE+ PNH P + ELA+ LD++SGCGG
Sbjct: 1087 AKSKTFEDPPNHARSPRNKGKGKGKGKSKAKSQVSEPSEPELAIKLPKLRTLDVFSGCGG 1146
Query: 217 MSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELV 269
+S G C L WA++ + A ++ +LN+P + V E L+LV
Sbjct: 1147 LSEGFHQAG--ICETL---WAIEMWEPAAQAFRLNNPGSTVFTEDCNVLLKLV 1194
>gi|119604485|gb|EAW84079.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Homo sapiens]
gi|119604486|gb|EAW84080.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Homo sapiens]
Length = 1678
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1269 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1326
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1327 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1374
>gi|114675304|ref|XP_001163764.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform 10 [Pan
troglodytes]
Length = 1678
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1269 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 1326
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1327 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1374
>gi|444525514|gb|ELV14061.1| DNA (cytosine-5)-methyltransferase 1 [Tupaia chinensis]
Length = 1472
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1016 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFL 1073
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1074 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1121
>gi|214010196|ref|NP_445806.3| DNA (cytosine-5)-methyltransferase 1 [Rattus norvegicus]
gi|149020535|gb|EDL78340.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_b [Rattus
norvegicus]
Length = 1621
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1215 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1272
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1273 RNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1316
>gi|37039880|gb|AAM96952.1| DNA cytosine-5-methyltransferase [Prunus persica]
Length = 1564
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPC+G SG NRF SP + I + ++ +PK +ENV
Sbjct: 1214 LPLPGQVDFINGGPPCRGFSGMNRF--TQSPWIKFHCKMIWACLAFADYFRPKLFPLENV 1271
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ F+K + L+ L+ M YQ RFGI+ AG YG+ Q R R
Sbjct: 1272 RKFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGISQSRKR 1315
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 5/53 (9%)
Query: 205 LALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
LA LD+++GCGG+S GL +T+WA++ ++ A ++ KLNHPE+ V
Sbjct: 1124 LATLDIFAGCGGLSNGL-----RQSGASITKWAIEYEEPAGDAFKLNHPESLV 1171
>gi|291238124|ref|XP_002738981.1| PREDICTED: DNA (cytosine-5-)-methyltransferase [Saccoglossus
kowalevskii]
Length = 1294
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP G V+++CGGPPCQG SG NRF + + +N +V ++ ++ +PK+ L+ENV
Sbjct: 896 LPQKGQVELLCGGPPCQGFSGMNRFNSRE--YSKFKNSLVVSYLSYCDYYRPKFFLLENV 953
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F K+ + + + L+ M YQ FG++ AG YG+ Q R R
Sbjct: 954 RNFVSFKKSMVLKLTMRSLLSMGYQCTFGVVQAGLYGVAQTRRR 997
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 17/127 (13%)
Query: 150 FYFDMEYCVEYSTF-------RTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHK 202
FYF YC + F RT+ S T + + +N
Sbjct: 767 FYFLEAYCSKSKEFEEPPSRARTIKGKGKGKGKGKSSTPVIEVKQVAAVKDNF-----QY 821
Query: 203 AELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAA 262
+L LD+++GCGG+S G T WA++ ++ A ++ +LN+P V +
Sbjct: 822 RKLRSLDVFAGCGGLSEGFHQSGVAEST-----WAIEKEEPAAQAFRLNNPGCTVFTDDC 876
Query: 263 EDFLELV 269
L LV
Sbjct: 877 NTLLRLV 883
>gi|149020536|gb|EDL78341.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_c [Rattus
norvegicus]
Length = 1634
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1228 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1285
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1286 RNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1329
>gi|67970373|dbj|BAE01529.1| unnamed protein product [Macaca fascicularis]
Length = 493
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 306 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFL 363
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV + + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 364 LENVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 411
>gi|149020534|gb|EDL78339.1| DNA (cytosine-5-)-methyltransferase 1, isoform CRA_a [Rattus
norvegicus]
Length = 1503
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1097 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1154
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1155 RNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1198
>gi|8132067|gb|AAF73200.1|AF152342_1 DNA-(cytosine-5)-methyltransferase [Xiphophorus maculatus x
Xiphophorus hellerii]
Length = 1503
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V ++ ++ +PK+ L+ENV
Sbjct: 1097 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSYLSYCDYYRPKFFLLENV 1154
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F + + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1155 RNFVSFKNSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1198
>gi|20137608|sp|Q9Z330.2|DNMT1_RAT RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
AltName: Full=DNA MTase RnoIP; Short=M.RnoIP; AltName:
Full=DNA methyltransferase I; AltName: Full=MCMT
Length = 1622
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1216 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1273
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1274 RNFVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1317
>gi|307193684|gb|EFN76367.1| DNA (cytosine-5)-methyltransferase 1 [Harpegnathos saltator]
Length = 1460
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Query: 419 PLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVV 478
P G+V+++CGGPPCQG SG NRF L +N +V + +++ +PK+ +MENV
Sbjct: 1009 PQKGEVELLCGGPPCQGFSGMNRFNLRQYSL--FKNSLVVSCLSYLDYYRPKFFVMENVR 1066
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FGI+ AG YG+PQ R R
Sbjct: 1067 NFVTFKRSMVLKLTLCCLVRMGYQCTFGILQAGNYGVPQTRRR 1109
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 84/209 (40%), Gaps = 29/209 (13%)
Query: 69 HIGKILEFFKTTD------GEEYFRVQWFYRAE----DTVMKEAADFHDRKRLFYSTVMN 118
HIG I + TT+ + Y +V YR E D+ + E AD + +++S +
Sbjct: 784 HIGYINAIYATTNNMLVSPSDIYIKVNRMYRPENTHRDSTLMEQADLN---MVYWSDEVF 840
Query: 119 DNPVDCIISKVIVA---QIPPKIGLKSNSIPSSDFYFDMEYCVEYSTFR-------TLLT 168
+ + K +A + + S S P FYF Y + TF +
Sbjct: 841 NVRFTEVAGKCYLAYSENLSESVEEWSASGPYR-FYFTESYNAKEKTFDEPPYSIINMGK 899
Query: 169 GKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLS 228
T+TV T + N+ L LD+++GCGG+S GL
Sbjct: 900 PGKGKGKGKLKTKTVEETENKPVIDKPANYSTITRRLRTLDIFAGCGGLSDGLHEAGVAE 959
Query: 229 CTNLVTRWALDSDKSACESLKLNHPEAQV 257
T WA++ +++A + +LN+P A V
Sbjct: 960 -----TLWAIEKEETAAYAFRLNYPNATV 983
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 15/148 (10%)
Query: 32 EDKIVSNVECHYAQARIGECIFDLGDCAYI--KGEGTQKHIGKILEFFKTTDGEEYFRVQ 89
+DKI+ Y +G +L D + + HI K++ ++ G + F
Sbjct: 522 DDKIIEGRRTFYKSVMVGNEKIELNDYVLVEPRNSAIPLHIAKVMYMWENKIGIKQFHAN 581
Query: 90 WFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIV--AQIP---PKIGLK--S 142
W R DT++ E AD + +F S D P + SK V + P K+G +
Sbjct: 582 WVRRGTDTILGETADPME---VFLSDDCEDVPFKSVNSKATVLHKKTPEDWSKLGNMDIN 638
Query: 143 NSIPSSD---FYFDMEYCVEYSTFRTLL 167
++I +D F++ M Y E + F L
Sbjct: 639 DTIKDTDGKTFFYKMRYTSETARFEDPL 666
>gi|283462212|gb|ADB22400.1| DNA (cytosine-5-)-methyltransferase [Saccoglossus kowalevskii]
Length = 820
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP G V+++CGGPPCQG SG NRF + + +N +V ++ ++ +PK+ L+ENV
Sbjct: 422 LPQKGQVELLCGGPPCQGFSGMNRFNSRE--YSKFKNSLVVSYLSYCDYYRPKFFLLENV 479
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F K+ + + + L+ M YQ FG++ AG YG+ Q R R
Sbjct: 480 RNFVSFKKSMVLKLTMRSLLSMGYQCTFGVVQAGLYGVAQTRRR 523
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 17/127 (13%)
Query: 150 FYFDMEYCVEYSTF-------RTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHK 202
FYF YC + F RT+ S T + + +N
Sbjct: 293 FYFLEAYCSKSKEFEEPPSRARTIKGKGKGKGKGKSSTPVIEVKQVAAVKDNF-----QY 347
Query: 203 AELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAA 262
+L LD+++GCGG+S G T WA++ ++ A ++ +LN+P V +
Sbjct: 348 RKLRSLDVFAGCGGLSEGFHQSGVAEST-----WAIEKEEPAAQAFRLNNPGCTVFTDDC 402
Query: 263 EDFLELV 269
L LV
Sbjct: 403 NTLLRLV 409
>gi|348509192|ref|XP_003442135.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Oreochromis
niloticus]
Length = 1505
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V ++ ++ +PK+ L+ENV
Sbjct: 1099 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSYLSYCDYYRPKFFLLENV 1156
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F + + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1157 RNFVSFKNSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1200
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 96/239 (40%), Gaps = 33/239 (13%)
Query: 60 YIKGEGTQK----HIGKILEFF--KTTDGEE-----YFRVQWFYRAEDTVMKEAADFH-D 107
YIKG +G+I E F + ++G+ R+ FYR E+T A +H D
Sbjct: 862 YIKGSNLDAPEPFRVGRIKEIFCHRRSNGKPDMSDVKLRLYKFYRPENTHKGVKASYHTD 921
Query: 108 RKRLFYSTVMNDNPVDCIISKVI-VAQIPPKIGLKSN-----SIPSSDFYFDMEYCVEYS 161
+L++S D V + V+ Q+ L + S+ FYF Y +
Sbjct: 922 INQLYWS----DEEVTVNMGDVLGRCQVEYAEDLNESIQDYSSVGPDRFYFLEAYSAKAK 977
Query: 162 TFR---TLLTGKIHDLSLPSCTETVPTTATSTFFENM---PNHGPHKAELALLDLYSGCG 215
+F +H + S E + P P + LD++SGCG
Sbjct: 978 SFEDPPNHARSTVHKGKGKGKGKGKGKGKASAAQEQLDSQPQPKPKVPKYRTLDVFSGCG 1037
Query: 216 GMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQK 274
G+S G A +S T WA++ + A ++ +LN+P V E L+LV +K
Sbjct: 1038 GLSEGF-HQAGIS----ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEK 1091
>gi|432869168|ref|XP_004071656.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Oryzias
latipes]
Length = 1466
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 88/170 (51%), Gaps = 22/170 (12%)
Query: 371 SGKRGLNFKVHWKGYSTSE---DSWEPI-EGLR-----------NCPERIKEFVRNGFKS 415
SG GL+ H G S S + WEP + R +C +K V +G K+
Sbjct: 995 SGCGGLSEGFHQAGISESLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLK-LVMSGEKT 1053
Query: 416 ----KILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKY 471
+ LP GDV+++CGGPPCQG SG NRF + +N +V ++ ++ +PK+
Sbjct: 1054 NSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSYLRYXDYYRPKF 1111
Query: 472 VLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L+ENV + + F + + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1112 FLLENVRNFVSFKNSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1161
>gi|410902659|ref|XP_003964811.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like [Takifugu rubripes]
Length = 1493
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 88/169 (52%), Gaps = 20/169 (11%)
Query: 371 SGKRGLNFKVHWKGYSTSE---DSWEPI-EGLR-NCPER---------IKEFVRNGFKS- 415
SG GL+ H G S S + WEP + R N P + + V +G K+
Sbjct: 1022 SGCGGLSEGFHQAGISESLWAIEMWEPAAQAFRLNNPGATVFTEDCNILLKLVMSGEKTN 1081
Query: 416 ---KILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYV 472
+ LP GDV+++CGGPPCQG SG NRF + +N +V ++ ++ +PK+
Sbjct: 1082 SLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSAFKNSLVVSYLSYCDYYRPKFF 1139
Query: 473 LMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L+ENV + + F + + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1140 LLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1188
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 97/239 (40%), Gaps = 34/239 (14%)
Query: 60 YIKGEGTQK----HIGKILEFF--KTTDG-----EEYFRVQWFYRAEDTVMKEAADFH-D 107
YIKG IG+I E F K ++G E R+ FYR E+T A +H D
Sbjct: 851 YIKGSNLDAPDPFRIGRIKEIFCHKRSNGKPDTSEVKLRLYKFYRPENTHKGVKATYHTD 910
Query: 108 RKRLFYSTVMNDNPVDCIISKVIV-------AQIPPKIGLKSNSIPSSDFYFDMEYCVEY 160
+L++S D V +++V+ + + S+ P FYF Y +
Sbjct: 911 INQLYWS----DEEVTVDMAQVLGRCQVEYGEDLNEPVQEYSSGGPDR-FYFLEAYNAKT 965
Query: 161 STFR---TLLTGKIHDLSLPSCTETVPTTATSTFFENMPN--HGPHKAELALLDLYSGCG 215
+F H + + + PN P + LD++SGCG
Sbjct: 966 KSFEDPPNHARSAAHKGKGKGKGKGKGKGKAAQDSHDTPNEPQMPKVPKYRTLDVFSGCG 1025
Query: 216 GMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQK 274
G+S G A +S + WA++ + A ++ +LN+P A V E L+LV +K
Sbjct: 1026 GLSEGF-HQAGIS----ESLWAIEMWEPAAQAFRLNNPGATVFTEDCNILLKLVMSGEK 1079
>gi|348546033|ref|XP_003460483.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like, partial
[Oreochromis niloticus]
Length = 772
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V ++ ++ +PK+ L+ENV
Sbjct: 520 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSYLSYCDYYRPKFFLLENV 577
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F + + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 578 RNFVSFKNSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 621
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 31/238 (13%)
Query: 60 YIKGEGTQK----HIGKILEFF--KTTDGEE-----YFRVQWFYRAEDTVMKEAADFH-D 107
YIKG +G+I E F + ++G+ R+ FYR E+T A +H D
Sbjct: 283 YIKGSNLDAPEPFRVGRIKEIFCHRRSNGKPDMSDVKLRLYKFYRPENTHKGVKASYHTD 342
Query: 108 RKRLFYS----TV-MNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDFYFDMEYCVEYST 162
+L++S TV M D C +V A+ + +S+ FYF Y + +
Sbjct: 343 INQLYWSDEEVTVNMGDVLGRC---QVEYAEDLNESIQDYSSVGPDRFYFLEAYSAKAKS 399
Query: 163 FR---TLLTGKIHDLSLPSCTETVPTTATSTFFENM---PNHGPHKAELALLDLYSGCGG 216
F +H + S E + P P + LD++SGCGG
Sbjct: 400 FEDPPNHARSTVHKGKGKGKGKGKGKGKASAAQEQLDSQPQPKPKVPKYRTLDVFSGCGG 459
Query: 217 MSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQK 274
+S G A +S T WA++ + A ++ +LN+P V E L+LV +K
Sbjct: 460 LSEGF-HQAGIS----ETLWAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEK 512
>gi|3818628|gb|AAC69603.1| DNA methyltransferase [Danio rerio]
Length = 700
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V ++ ++ +P++ L+ENV
Sbjct: 295 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSYLSYCDYYRPRFFLLENV 352
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 353 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 396
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 92/233 (39%), Gaps = 24/233 (10%)
Query: 60 YIKGEGTQK----HIGKILEFF--KTTDG-----EEYFRVQWFYRAEDTVMKEAADFH-D 107
YIKG IG+I E F K ++G E R+ FYR E+T +H D
Sbjct: 61 YIKGSNLDAPQPFRIGRIKEIFCNKRSNGKPDTTEIKLRLYKFYRPENTHKGPKGAYHSD 120
Query: 108 RKRLFYSTVMNDNPVDCIISKVIVA---QIPPKIGLKSNSIPSSDFYFDMEYCVEYSTFR 164
+L++S + ++++ V + + SN P FYF Y + +F
Sbjct: 121 INQLYWSDEEATVSMTEVLTRCRVEYAEDLVESVQDYSNKGPDR-FYFLEAYNAKTKSFE 179
Query: 165 ---TLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELALLDLYSGCGGMSTGL 221
++ + + P +L LD++SGCGG+S G
Sbjct: 180 DPPNHARSAVNKGKGKGKGKGKGKGKQRSRTTGSGAQEPVVPKLRTLDVFSGCGGLSEGF 239
Query: 222 CLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQK 274
A +S T WA++ A ++ +LN+P V E L+LV +K
Sbjct: 240 -HQAGIS----ETHWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEK 287
>gi|2952283|gb|AAC05487.1| chromomethylase [Rhododendron macrophyllum]
Length = 62
Score = 89.0 bits (219), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/61 (65%), Positives = 48/61 (78%)
Query: 437 SGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRL 496
SG+NRFRNV PL D +N Q+ +FMDIVEFLKP++VLMENVVDI K LG YA++RL
Sbjct: 1 SGFNRFRNVTEPLSDPKNHQLEVFMDIVEFLKPRFVLMENVVDIFKLAGGVLGCYAVARL 60
Query: 497 V 497
V
Sbjct: 61 V 61
>gi|148693195|gb|EDL25142.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_d [Mus musculus]
Length = 1619
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1213 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1270
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1271 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1314
>gi|148693196|gb|EDL25143.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_e [Mus musculus]
Length = 1604
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1198 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1255
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1256 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1299
>gi|31419356|gb|AAH53047.1| Dnmt1 protein [Mus musculus]
Length = 1627
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1221 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1278
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1279 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1322
>gi|148693197|gb|EDL25144.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_f [Mus musculus]
Length = 1638
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1232 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1289
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1290 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1333
>gi|327180732|ref|NP_001186360.2| DNA (cytosine-5)-methyltransferase 1 isoform 1 [Mus musculus]
gi|20141336|sp|P13864.5|DNMT1_MOUSE RecName: Full=DNA (cytosine-5)-methyltransferase 1; Short=Dnmt1;
Short=Met-1; AltName: Full=DNA methyltransferase MmuI;
Short=DNA MTase MmuI; Short=M.MmuI; AltName: Full=MCMT
gi|6625687|gb|AAF19352.1| DNA methyltransferase [Mus musculus]
gi|37574019|gb|AAH48148.2| DNA methyltransferase (cytosine-5) 1 [Mus musculus]
Length = 1620
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1214 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1271
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1272 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1315
>gi|4160670|dbj|BAA37118.1| DNA cytosine 5 methyltransferase [Rattus rattus]
Length = 1622
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1216 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1273
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1274 RNSVSFRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1317
>gi|74151181|dbj|BAE27713.1| unnamed protein product [Mus musculus]
Length = 1619
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1213 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1270
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1271 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1314
>gi|327180734|ref|NP_034196.5| DNA (cytosine-5)-methyltransferase 1 isoform 2 [Mus musculus]
Length = 1619
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1213 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1270
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1271 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1314
>gi|1765919|emb|CAA32910.1| DNA methyltransferase 1 [Mus musculus]
Length = 1620
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1214 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1271
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1272 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1315
>gi|148693193|gb|EDL25140.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_b [Mus musculus]
Length = 1645
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1239 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1296
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1297 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1340
>gi|313661499|ref|NP_001186362.1| DNA (cytosine-5)-methyltransferase 1 isoform 4 [Mus musculus]
gi|7339827|gb|AAF60965.1| DNA methyltransferase [Mus musculus]
gi|9719249|gb|AAF97695.1| DNA (cytosine-5)-methyltransferase [Mus musculus]
gi|148693192|gb|EDL25139.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_a [Mus musculus]
gi|148693198|gb|EDL25145.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_a [Mus musculus]
Length = 1502
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1096 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1153
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1154 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1197
>gi|224613538|gb|ACN60348.1| DNA [Salmo salar]
Length = 466
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V ++ ++ +PK+ L+ENV
Sbjct: 50 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSYLSYCDYYRPKFFLLENV 107
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F + + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 108 RNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 151
>gi|198416008|ref|XP_002122948.1| PREDICTED: Zn-finger (CXXC)-5 [Ciona intestinalis]
Length = 1305
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 71/119 (59%), Gaps = 6/119 (5%)
Query: 407 EFVRNGFK----SKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMD 462
E V NG + + LP GDV+++CGGPPCQG SG NRF + + +N +V ++
Sbjct: 900 EMVMNGEERSKCGQRLPQKGDVELLCGGPPCQGFSGMNRFNSRE--YSRFKNSLVVSYLS 957
Query: 463 IVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ +P++ L+ENV + + F + + +L+ L+ M YQ FG++ AG YG+ Q R R
Sbjct: 958 YCDYYRPRFFLLENVRNFVSFKNCMVLKLSLAALLRMGYQCTFGVLQAGHYGVSQTRRR 1016
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 42 HYAQARIGECIFDLGDCAYIKG--EGTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTVM 99
+Y R+G + + G+C +K EG +IG+++ + + G+ V WF RA DT++
Sbjct: 453 YYPGVRVGGDVIEGGECVSVKNKDEGGLPYIGRVVYMWGESGGK-MVHVDWFMRAADTIL 511
Query: 100 KEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPK-----IGLKSNSIPSSD----F 150
+E + + L +D V+CI KV V+ P +G P++D F
Sbjct: 512 QETSQPDE---LLIIDECDDLSVECIAGKVDVSHRVPHQNWSFMGGVEEQHPTTDGVSSF 568
Query: 151 YFDMEYCVEYSTF 163
Y+ Y E++ F
Sbjct: 569 YYQKMYVPEFARF 581
>gi|148693194|gb|EDL25141.1| DNA methyltransferase (cytosine-5) 1, isoform CRA_c [Mus musculus]
Length = 1683
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1277 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1334
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1335 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1378
>gi|313661497|ref|NP_001186361.1| DNA (cytosine-5)-methyltransferase 1 isoform 3 [Mus musculus]
Length = 1501
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1095 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1152
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1153 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1196
>gi|2689716|gb|AAC40061.1| DNA (cytosine-5)-methyltransferase [Mus musculus]
Length = 1502
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1096 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1153
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1154 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1197
>gi|332138119|pdb|3AV4|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1
gi|332138120|pdb|3AV5|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1 With
Adohcy
gi|332138121|pdb|3AV6|A Chain A, Crystal Structure Of Mouse Dna Methyltransferase 1 With
Adomet
Length = 1330
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 924 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 981
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 982 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1025
>gi|159481068|ref|XP_001698604.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
gi|158282344|gb|EDP08097.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 2204
Score = 88.6 bits (218), Expect = 7e-15, Method: Composition-based stats.
Identities = 39/104 (37%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP PG V ++ GGPPCQG SG NRF +N ++ + +F +P+Y L+ENV
Sbjct: 1816 LPAPGAVGLMMGGPPCQGYSGMNRFNT--GMWSQVQNSMVMAYTSYCDFYRPRYFLLENV 1873
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + ++ + R + L+ + YQ RFG++ AGC+G+ Q R R
Sbjct: 1874 RNFVAYNDGRVFRLVVRTLLELGYQVRFGVLNAGCFGVSQSRKR 1917
Score = 42.4 bits (98), Expect = 0.56, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
+L +D+++GCGG+S G +RWA++ D+ A ++ KLN+P V
Sbjct: 1725 KLPTMDIFAGCGGLSEGFHQAGVAE-----SRWAIEYDREAADAFKLNNPHTTV 1773
>gi|4704471|gb|AAD28102.1| cytosine DNA methyltransferase [Rattus norvegicus]
Length = 349
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 48 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 105
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 106 RNFVSFRRSMVLKLTLRCLVRMGYQCIFGVLQAGQYGVAQTRRR 149
>gi|315583643|pdb|3PT6|A Chain A, Crystal Structure Of Mouse Dnmt1(650-1602) In Complex With
Dna
gi|315583644|pdb|3PT6|B Chain B, Crystal Structure Of Mouse Dnmt1(650-1602) In Complex With
Dna
Length = 954
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 566 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 623
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 624 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 667
>gi|315583649|pdb|3PT9|A Chain A, Crystal Structure Of Mouse Dnmt1(731-1602) In The Free
State
gi|377656587|pdb|4DA4|A Chain A, Structure Of Mouse Dnmt1 (731-1602) Bound To
Hemimethylated Cpg Dna
gi|377656588|pdb|4DA4|B Chain B, Structure Of Mouse Dnmt1 (731-1602) Bound To
Hemimethylated Cpg Dna
Length = 873
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 485 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 542
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 543 RNFVSYRRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 586
>gi|209978474|gb|ACJ04671.1| DNA methyltransferase 1 [Carassius auratus]
Length = 1503
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N V ++ ++ +PK+ L+ENV
Sbjct: 1098 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSAFKNSLAVSYLSYCDYYRPKFFLLENV 1155
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + F ++ + + L LV M YQ FG++ AG YG+ Q R R
Sbjct: 1156 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRR 1199
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 94/233 (40%), Gaps = 23/233 (9%)
Query: 60 YIKGEGTQK----HIGKILEFF--KTTDG-----EEYFRVQWFYRAEDTVMKEAADFH-D 107
YIKG IG+I E F K +DG + R+ FYR E+T +H D
Sbjct: 863 YIKGSNLDAPEPFRIGRIKEIFCNKRSDGKPDRMDPKLRLYKFYRPENTHKGPKGAYHSD 922
Query: 108 RKRLFYSTVMNDNPVDCIISKVIVAQIPPKI-GLKSNSIPSSD-FYFDMEYCVEYSTFRT 165
+L++S + ++ + V + ++ S D FYF Y + +F
Sbjct: 923 VNQLYWSDEEATVNMAEVLGRCQVEYAEDLVESVQDYSSRGPDRFYFLEAYNAKTKSFED 982
Query: 166 LLTGKIHDLSLPSCTETVPTT----ATSTFFENMPNHGPHKAELALLDLYSGCGGMSTGL 221
+ ++ A S ++ P +L LD++SGCGG+S G
Sbjct: 983 PPSHARSAVNKGKGKGKGKGKGKGKAASQESQDKEPQEPTVPKLRTLDVFSGCGGLSEGF 1042
Query: 222 CLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQK 274
A +S T WA++ A ++ +LN+P V E L+LV +K
Sbjct: 1043 -HQAGIS----ETHWAIEMWDPAAQAFRLNNPGTTVFTEDCNVLLKLVMSGEK 1090
>gi|432099546|gb|ELK28687.1| DNA (cytosine-5)-methyltransferase 1 [Myotis davidii]
Length = 1604
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 95/206 (46%), Gaps = 21/206 (10%)
Query: 323 DSPRVTRSSVNSPRVTRNSVNSPRDVDIPPGEYEV------ARIVDICYGDPNESGKRGL 376
D P RS N + P+ P E +V R +D+ SG GL
Sbjct: 1099 DPPNHARSPGNKGKGKGKGKGRPKSQTSEPKEPKVDIQLPKLRTLDVF------SGCGGL 1152
Query: 377 NFKVHWKGYSTSE---DSWEPI-EGLR-NCPERIKEFVRNGFKSKILPLPGDVDVICGGP 431
+ H G S + + W+P + R N P V N K LP GDV+++CGGP
Sbjct: 1153 SEGFHQAGISQTLWAIEMWDPAAQAFRLNNPGSTVLEVTNSLGQK-LPQKGDVEMLCGGP 1211
Query: 432 PCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRY 491
PCQG SG NRF + +N +V F+ ++ +P+Y L+ENV + + F ++ + +
Sbjct: 1212 PCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKL 1269
Query: 492 ALSRLVHMKYQARFGIIAA-GCYGLP 516
L LV M YQ FG++ GC P
Sbjct: 1270 TLRCLVRMGYQCTFGVLQGDGCEAAP 1295
>gi|31074161|gb|AAP20551.1| DNA cytosine-5 methyltransferase 1 [Bos taurus]
Length = 1611
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 409 VRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLK 468
V N K+L GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +
Sbjct: 1200 VTNSRGQKLL-QKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYR 1256
Query: 469 PKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
P+Y L+ENV + + F ++ + + L LV YQ FG++ AG YG+ Q R R
Sbjct: 1257 PRYFLLENVRNFVSFKRSMVLKLTLRCLVRRGYQCTFGVLQAGQYGVAQTRRR 1309
>gi|241997518|ref|XP_002433408.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
gi|215490831|gb|EEC00472.1| DNA (cytosine-5)-methyltransferase, putative [Ixodes scapularis]
Length = 414
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 72/128 (56%), Gaps = 7/128 (5%)
Query: 398 LRNCPERIKEFVR---NGFKSKILPLPGDVDVICGGPPCQGISGYNRFR-NVDSPLDDER 453
+++C +KE + K + P G+VD +CGGPPCQG S NR R N +S L +
Sbjct: 52 VQDCNSFLKEVLEGQETNAKGQRFPKKGEVDFLCGGPPCQGYSLLNRHRGNWNSRL---K 108
Query: 454 NRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCY 513
N + + + ++ +P++ LMENV + +K + + L L+ + YQ FG++ AG Y
Sbjct: 109 NSLVSTLLSLCDYYRPRFFLMENVKSFISEEKGLVMQLTLQSLLRLGYQCCFGVLQAGSY 168
Query: 514 GLPQFRLR 521
GLPQ R R
Sbjct: 169 GLPQDRKR 176
>gi|302836690|ref|XP_002949905.1| maintenance DNA methyltransferase [Volvox carteri f. nagariensis]
gi|300264814|gb|EFJ49008.1| maintenance DNA methyltransferase [Volvox carteri f. nagariensis]
Length = 2277
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP PG V ++ GGPPCQG SG NRF +N ++ ++ +F +P+Y L+ENV
Sbjct: 1847 LPTPGSVALMMGGPPCQGYSGMNRFNK--GLWSQVQNSMVMAYLSYCDFYRPRYFLLENV 1904
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + R + L+ + YQ RFGI+ AG +G+PQ R R
Sbjct: 1905 RNFAVYRGGEVFRLVVRTLLDLGYQVRFGILNAGHFGVPQSRKR 1948
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 199 GPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
G +L LD+++GCGG+S G+ TRWA++ D A E+ KLN+P+A+V
Sbjct: 1751 GGEGIQLDTLDIFAGCGGLSEGMHQAGVAR-----TRWAIEYDSEAAEAYKLNNPDAKV 1804
>gi|384244928|gb|EIE18425.1| S-adenosyl-L-methionine-dependent methyltransferase, partial
[Coccomyxa subellipsoidea C-169]
Length = 468
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 20/122 (16%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP PG+VD +CGGPPCQG SG NRF L +N ++ ++ +F +P+Y L+ENV
Sbjct: 91 LPAPGEVDFLCGGPPCQGYSGMNRFNKGTWSL--VQNSMVMAYLSYADFYRPRYFLLENV 148
Query: 478 VDILKFDKASLGRYALSRLVHMKYQA------------------RFGIIAAGCYGLPQFR 519
+ + +K+ R L L+ M YQA RFG++ AG +G+ Q R
Sbjct: 149 RNFVSHNKSHAFRLTLRSLLDMGYQARLLISIPLALGIWECEQVRFGVLNAGNFGVSQSR 208
Query: 520 LR 521
R
Sbjct: 209 KR 210
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Query: 205 LALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEA 255
LA +D+++GCGG+S GL T+WA++ ++ A E+ K+N+P+A
Sbjct: 1 LATMDIFAGCGGLSEGLHRAGAAR-----TKWAIEYEQPAAEAFKVNNPDA 46
>gi|89243223|gb|ABD64771.1| Met1 [Volvox carteri f. nagariensis]
Length = 2262
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP PG V ++ GGPPCQG SG NRF +N ++ ++ +F +P+Y L+ENV
Sbjct: 1832 LPTPGSVALMMGGPPCQGYSGMNRFNK--GLWSQVQNSMVMAYLSYCDFYRPRYFLLENV 1889
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + R + L+ + YQ RFGI+ AG +G+PQ R R
Sbjct: 1890 RNFAVYRGGEVFRLVVRTLLDLGYQVRFGILNAGHFGVPQSRKR 1933
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 199 GPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
G +L LD+++GCGG+S G+ TRWA++ D A E+ KLN+P+A+V
Sbjct: 1736 GGEGIQLDTLDIFAGCGGLSEGMHQAGVAR-----TRWAIEYDSEAAEAYKLNNPDAKV 1789
>gi|159474758|ref|XP_001695492.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
gi|158275975|gb|EDP01750.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1663
Score = 84.0 bits (206), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP PG VD++ GGPPCQG SG NR + + + I ++ +FL+P+Y L+ENV
Sbjct: 1198 LPGPGAVDLLVGGPPCQGFSGMNRDNGSEGSV--LKKSMIKAYLSYADFLRPRYFLLENV 1255
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + R AL L+ M YQ R G++ A +G+PQ R R
Sbjct: 1256 RNFAAHEGGRYFRLALRSLLDMGYQVRVGVLNAAHHGVPQSRSR 1299
>gi|321469202|gb|EFX80183.1| hypothetical protein DAPPUDRAFT_346987 [Daphnia pulex]
Length = 1400
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 63/107 (58%), Gaps = 2/107 (1%)
Query: 415 SKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLM 474
++LP V+++CGGPPCQG SG NRF + RN IV ++ ++ +P++ ++
Sbjct: 994 GQVLPPKDGVELLCGGPPCQGFSGMNRFNSRQ--YSSFRNSLIVSYLSYCDYYRPRFFIL 1051
Query: 475 ENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
ENV + + F + + + + LV M YQ FG++ AG YG+ Q R R
Sbjct: 1052 ENVRNFVSFKRNMVLKLTMRCLVRMGYQCTFGVLQAGNYGVSQTRRR 1098
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 200 PHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRN 259
P L LD+++GCGG+S GL T WA++ + +A ++ +LN+P+A V
Sbjct: 921 PKIEPLKTLDIFAGCGGLSEGLHQSGVAK-----TYWAIECEPTAAQAFRLNNPDAAVFT 975
Query: 260 EAAEDFLELVKEWQ 273
+ L++ + Q
Sbjct: 976 DDCNTILKMAIDGQ 989
>gi|336379961|gb|EGO21115.1| hypothetical protein SERLADRAFT_417509 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1251
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 61/118 (51%), Gaps = 18/118 (15%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
+P PGDVD I GGPPCQ SG N ++ +D R+ I + VEF +P Y L+ENV
Sbjct: 841 MPKPGDVDFIYGGPPCQSFSGINHWKKA----NDIRSTLICNMLSYVEFYRPSYFLLENV 896
Query: 478 VDILKF------------DKASLG--RYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
IL + D +G ++ L L + YQ RF ++ AG YG PQ R R
Sbjct: 897 TGILNYRLKGRMEGRSTVDGIEMGVVKFILRSLAALGYQIRFNVLQAGQYGAPQGRQR 954
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 205 LALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAED 264
L L+L+SG GG+ TGL + + TRWA++ SA + + NH V N+
Sbjct: 758 LRGLELFSGAGGLGTGLDMSGFVE-----TRWAVEFSPSAAMTYQANHSHTTVYNQCTNV 812
Query: 265 FLE 267
L+
Sbjct: 813 LLQ 815
>gi|443724442|gb|ELU12454.1| hypothetical protein CAPTEDRAFT_222429 [Capitella teleta]
Length = 1007
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Query: 416 KILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLME 475
++ PL G+VD+I GPPCQG S N+F S +N +V + ++ +PKY +ME
Sbjct: 628 QVYPLKGEVDLISAGPPCQGYSLLNKF--TSSEAYQFKNSLVVTALSFCDYYQPKYFVME 685
Query: 476 NVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
NV +L + + L+ + YQ RFGI+ AG YG+PQ R R
Sbjct: 686 NVSTFATHKGGNLLKLVIRCLLELGYQCRFGILQAGSYGVPQSRRR 731
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 7/57 (12%)
Query: 202 KAELALLDLYSGCGGMSTGLC-LGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
+A+L LDL+SGCGG+S GL G +C WA++ D E+ K N P+ V
Sbjct: 555 EAKLRSLDLFSGCGGLSLGLSQAGVSEAC------WAVERDPVIAEAFKRNFPKCCV 605
>gi|440794374|gb|ELR15535.1| C5 cytosine-specific DNA methylase superfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 1562
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 69/143 (48%), Gaps = 23/143 (16%)
Query: 398 LRNCPERIKEFVRNGFKSKI----LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDER 453
L++ ER +E + G K + LP G ++ I GPPCQG +G NRF D L
Sbjct: 1126 LKHAIERHEEATKTGKKEAMEANQLPPKGAINFIYCGPPCQGFTGMNRFPKADDVL---- 1181
Query: 454 NRQIVIFMDIVEFLKPKYVLMENVVDILKFD---------------KASLGRYALSRLVH 498
N I + V+F +P Y L+ENV ++ F K + ++ L L
Sbjct: 1182 NSLIATTLSCVDFYRPTYFLLENVRGMVDFKLGGVQETKARMSGGIKLGVVKFILRALTA 1241
Query: 499 MKYQARFGIIAAGCYGLPQFRLR 521
M YQARF + AG YG+PQ R R
Sbjct: 1242 MGYQARFSLQQAGMYGVPQSRRR 1264
>gi|402224965|gb|EJU05027.1| S-adenosyl-L-methionine-dependent methyltransferase [Dacryopinax
sp. DJM-731 SS1]
Length = 470
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 61/117 (52%), Gaps = 17/117 (14%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP PG+VD+I GGPPCQG S N F + D RN I + V+FL P++VL+ENV
Sbjct: 318 LPRPGEVDIIIGGPPCQGFSRLNPFASA----LDSRNSLIGNALSYVDFLHPRFVLLENV 373
Query: 478 VDILKFDKA-------------SLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+LK + + +S LV YQ RF ++ AG +G PQ R R
Sbjct: 374 PPLLKMSSTVRDETGDEEHIENAFAKLIVSFLVQRGYQVRFKVLQAGQHGAPQGRSR 430
>gi|449268905|gb|EMC79734.1| DNA (cytosine-5)-methyltransferase 1, partial [Columba livia]
Length = 1252
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 867 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 924
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAG 511
+ + F ++ + + L LV M YQ FG++ G
Sbjct: 925 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQVG 958
>gi|409045793|gb|EKM55273.1| hypothetical protein PHACADRAFT_184086 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1237
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 17/117 (14%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
+P PG+VD ICGGPPCQ SG NR++ DD R+ I + V+F +PKY L+ENV
Sbjct: 818 MPKPGEVDFICGGPPCQSFSGANRWKKA----DDIRSTLICNTISYVDFYRPKYFLLENV 873
Query: 478 VDILKF-----------DKASLG--RYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L D ++G ++ LV + YQ ++ A YG PQ R R
Sbjct: 874 TGLLSVPLGTEKQDQMTDGVAMGVVKFIFRALVSLGYQVHCKVLQAAQYGTPQSRER 930
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 195 MPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPE 254
+ HGP L L+L++G GG+++GL + T+WA++S SA S N+P
Sbjct: 725 LEQHGP----LRCLELFAGAGGLASGLHQSGFVE-----TKWAVESSPSAALSFAANNPR 775
Query: 255 AQVRNEAAEDFLELVKEWQK 274
V + + L E Q+
Sbjct: 776 CTVYTQCSNVLLRHAIETQQ 795
>gi|159470409|ref|XP_001693352.1| predicted protein [Chlamydomonas reinhardtii]
gi|158277610|gb|EDP03378.1| predicted protein [Chlamydomonas reinhardtii]
Length = 2505
Score = 78.6 bits (192), Expect = 7e-12, Method: Composition-based stats.
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Query: 382 WKGYSTSEDSWEPIEGLRNCPERIKEFVRNG-FKSKILPLPGDVDVICGGPPCQGISGYN 440
W Y + W ++ PE + + +R + ++LPL G V ++ G PPCQ ++G+N
Sbjct: 1721 WPDYPNNRFQWVVLKQAEGSPELLLDLLRRILYTERLLPLRGTVTLLVGCPPCQDVTGHN 1780
Query: 441 RFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRL-VHM 499
R +N RNR I +++V+FL+ YV +E V D ++ D RY ++ M
Sbjct: 1781 RSQNGMPVWASPRNRVIGHILELVKFLEIPYVFIEQVRDAVRKDDGYWRRYVRAKAQADM 1840
Query: 500 KYQARFGIIAAGCYGLPQFRLR 521
+YQ R I+ A G+PQ R R
Sbjct: 1841 RYQIRDAILHAPLQGIPQIRAR 1862
>gi|225862882|ref|YP_002748260.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
gi|225789623|gb|ACO29840.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
Length = 360
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 83/171 (48%), Gaps = 12/171 (7%)
Query: 357 VARIVDI-CYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIK-----EFVR 410
VAR++D+ C G R F++ G +ED+ E +N P+ E ++
Sbjct: 2 VARVIDLFCGCGGISEGFRLSGFEI-VGGLDINEDAVETFN--KNFPDSQAYCADIEKIK 58
Query: 411 NGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
N + L GD+DVI GGPPCQG S NR++ ++D RN+ ++ VE LKPK
Sbjct: 59 NDDIPFMFDLLGDIDVIVGGPPCQGFSSANRWQ---KEIEDPRNKLFYEYIRFVEVLKPK 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
VL+ENV IL D L Y ++ A YG+PQ RLR
Sbjct: 116 VVLIENVRGILTRDNGYAKNKIYEILQRSGYNVDSAVLDASEYGVPQKRLR 166
>gi|2956677|emb|CAB09661.1| DNA-C5-methyltransferase [Ascobolus immersus]
Length = 1336
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 64/119 (53%), Gaps = 19/119 (15%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP G+VD I GGPPCQG SG NR++ +D +N + F+ V+ KP++VL+ENV
Sbjct: 866 LPKKGEVDFIYGGPPCQGFSGVNRYKKG----NDIKNSLVATFLSYVDHYKPRFVLLENV 921
Query: 478 VDI----LKFDKASLG-----------RYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ L K + G ++ L+ M YQ R G++ +G YG+PQ R R
Sbjct: 922 KGLITTKLGNSKNAEGKWEGGISNGVVKFIYRTLISMNYQCRIGLVQSGEYGVPQSRPR 980
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
+L LD+++GCGG++ GL L + T+WA++ SA +L LN P+AQV N+ A
Sbjct: 783 KLKGLDIFAGCGGLTLGLDLSGAVD-----TKWAIEFAPSAANTLALNFPDAQVFNQCAN 837
Query: 264 DFL 266
L
Sbjct: 838 VLL 840
>gi|409045787|gb|EKM55267.1| hypothetical protein PHACADRAFT_184079 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1376
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 59/120 (49%), Gaps = 20/120 (16%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
+P PG+VD I GGPPCQG S N R V DD RN + + VEF PK+ ++ENV
Sbjct: 943 MPRPGEVDFIYGGPPCQGFSRMNHSRTV----DDYRNTLVCNMLSYVEFYHPKFFMLENV 998
Query: 478 VDILKFDKAS----------------LGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
IL A+ + + L L + YQ F ++ AG YG PQ RLR
Sbjct: 999 EGILYHPLAATQSGPGRKMEGGVRMGVVKLILRTLTSLGYQVHFKLLQAGQYGAPQSRLR 1058
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 193 ENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNH 252
E M +H P L L+L++G GG+STG + T WA++ SAC + + NH
Sbjct: 852 ELMDSHSP----LRGLELFAGAGGLSTGFDESGYVK-----TMWAVELGASACLTYEENH 902
Query: 253 PEAQV 257
P AQV
Sbjct: 903 PYAQV 907
>gi|443899025|dbj|GAC76358.1| hypothetical protein PANT_20d00075 [Pseudozyma antarctica T-34]
Length = 758
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 59/111 (53%), Gaps = 10/111 (9%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP PGDVDVI GPPCQG S N+ D+ D RN + + VE L+PKY ++ENV
Sbjct: 378 LPRPGDVDVIAAGPPCQGFSRKNQTAARDAAEKDPRNLLVCTVLGWVEHLQPKYFILENV 437
Query: 478 VDILKFDKASLG-------RYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
F + LG + L+ L+ + Y A +G + +G YG Q R R
Sbjct: 438 EG---FTASKLGGHDQGMVKLVLAVLLKIGYAATWGFVQSGAYGCAQSRGR 485
>gi|2906004|gb|AAC03766.1| C5-DNA-methyltransferase [Ascobolus immersus]
Length = 1356
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 64/119 (53%), Gaps = 19/119 (15%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP G+VD I GGPPCQG SG NR++ +D +N + F+ V+ KP++VL+ENV
Sbjct: 866 LPKKGEVDFIYGGPPCQGFSGVNRYKKG----NDIKNSLVATFLSYVDHYKPRFVLLENV 921
Query: 478 VDI----LKFDKASLG-----------RYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ L K + G ++ L+ M YQ R G++ +G YG+PQ R R
Sbjct: 922 KGLITTKLGNSKNAEGKWEGGISNGVVKFIYRTLISMNYQCRIGLVQSGEYGVPQSRPR 980
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
+L LD+++GCGG++ GL L + T+W ++ SA +L LN P+AQV N+ A
Sbjct: 783 KLKGLDIFAGCGGLTLGLDLSGAVD-----TKWDIEFAPSAANTLALNFPDAQVFNQCAN 837
Query: 264 DFL 266
L
Sbjct: 838 VLL 840
>gi|47220040|emb|CAG12188.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1209
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 97/199 (48%), Gaps = 35/199 (17%)
Query: 338 TRNSVNSPRDVDIPPGEYEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSE---DSWEP 394
++++ N P+ + +P R +D+ SG GL+ H G S + + WEP
Sbjct: 768 SQDTPNEPQTLKVPK-----YRTLDVF------SGCGGLSEGFHQAGISETLWAIEMWEP 816
Query: 395 I-EGLR-NCPER---------IKEFVRNGFKS----KILPLPGDVDVICGGPPCQGISGY 439
+ R N P + + V +G K+ + LP GDV+++CGGPPCQG SG
Sbjct: 817 AAQAFRLNNPGATVFTEDCNILLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGM 876
Query: 440 NRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHM 499
NRF + +N +V ++ ++ +PK+ L+ENV + + F + + + L LV M
Sbjct: 877 NRFNS--RTYSAFKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRM 934
Query: 500 KYQARFGIIAA----GCYG 514
YQ FG++ GC G
Sbjct: 935 GYQCTFGVLQVSGTPGCVG 953
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 101/240 (42%), Gaps = 36/240 (15%)
Query: 60 YIKGEGTQK----HIGKILEFF--KTTDG-----EEYFRVQWFYRAEDTVMKEAADFH-D 107
YIKG IG+I E F K ++G E R+ FYR E+T A +H D
Sbjct: 619 YIKGSNLDAPDPFRIGRIKEIFCPKRSNGKPDTSEVKLRLYKFYRPENTHKGVKATYHAD 678
Query: 108 RKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSN-------SIPSSDFYFDMEYCVEY 160
+L++S D V +++V+ + + G N S FYF Y +
Sbjct: 679 INQLYWS----DEEVTVDMAQVL-GRCQVEYGEDLNEPVQEYSSGGPDRFYFLEAYNAKT 733
Query: 161 STFR---TLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKAELA---LLDLYSGC 214
+F +H + ++ ++ PN P ++ LD++SGC
Sbjct: 734 KSFEDPPNHARSVVHKGKGKGKGKGKGKGKAASESQDTPNE-PQTLKVPKYRTLDVFSGC 792
Query: 215 GGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQK 274
GG+S G A +S T WA++ + A ++ +LN+P A V E L+LV +K
Sbjct: 793 GGLSEGF-HQAGIS----ETLWAIEMWEPAAQAFRLNNPGATVFTEDCNILLKLVMSGEK 847
>gi|336367242|gb|EGN95587.1| hypothetical protein SERLA73DRAFT_76683 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1285
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 61/120 (50%), Gaps = 20/120 (16%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
+P PGDVD I GGPPCQ SG N ++ +D R+ I + VEF +P Y L+ENV
Sbjct: 893 MPKPGDVDFIYGGPPCQSFSGINHWKKA----NDIRSTLICNMLSYVEFYRPSYFLLENV 948
Query: 478 VDILKF------------DKASLG--RYALSRLVHMKYQARFGI--IAAGCYGLPQFRLR 521
IL + D +G ++ L L + YQ RF + + AG YG PQ R R
Sbjct: 949 TGILNYRLKGRMEGRSTVDGIEMGVVKFILRSLAALGYQIRFNVLQLQAGQYGAPQGRQR 1008
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 208 LDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLE 267
L+L+SG GG+ TGL + + TRWA++ SA + + NH V N+ L+
Sbjct: 813 LELFSGAGGLGTGLDMSGFVE-----TRWAVEFSPSAAMTYQANHSHTTVYNQCTNVLLQ 867
>gi|351700800|gb|EHB03719.1| DNA (cytosine-5)-methyltransferase 1 [Heterocephalus glaber]
Length = 1601
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 1216 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 1273
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGII 508
+ + F ++ + + L LV M YQ FG++
Sbjct: 1274 RNFVSFKRSMVLKLTLRCLVRMGYQCTFGVL 1304
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 88/229 (38%), Gaps = 28/229 (12%)
Query: 60 YIKGEGTQK----HIGKILEFF-------KTTDGEEYFRVQWFYRAEDTVMKEAADFHDR 108
YIKG IG+I E F K + E ++ FYR E+T A +H
Sbjct: 984 YIKGSNLDAPEPYRIGRIKEIFCPKKSNGKPNEAEIKIKLYKFYRPENTHKSNPASYHAD 1043
Query: 109 KRLFY----STVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDFYFDMEYCVEYSTFR 164
L Y V+ V + +P + S P FYF Y + TF
Sbjct: 1044 INLLYWSDEEAVVEFRAVQGRCTVEYGEDLPECLQEYSTGGPDR-FYFLEAYNAKSKTFE 1102
Query: 165 TLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHGPHKA----ELALLDLYSGCGGMSTG 220
H S + + T + + P +A +L LD++SGCGG+S G
Sbjct: 1103 DPPN---HARSPGNKGKGKGKGKGKTKSQALEPSEPEQAIDLPKLRTLDVFSGCGGLSEG 1159
Query: 221 LCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELV 269
C L WA++ + A ++ +LN+P + V E L+LV
Sbjct: 1160 FHQAG--ICETL---WAIEMWEPAAQAFRLNNPGSTVFTEDCNVLLKLV 1203
>gi|297788908|ref|XP_002862484.1| hypothetical protein ARALYDRAFT_920657 [Arabidopsis lyrata subsp.
lyrata]
gi|297308026|gb|EFH38742.1| hypothetical protein ARALYDRAFT_920657 [Arabidopsis lyrata subsp.
lyrata]
Length = 163
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ LPLPG VD I GGPPCQG SG NRF D + I+ F+ ++ +PKY L
Sbjct: 75 QKSTLPLPGQVDFINGGPPCQGFSGMNRFS--DRSWSKVQCEMILAFLSFADYFRPKYFL 132
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQ 502
+ENV I+ F+ + ++ L+ M YQ
Sbjct: 133 LENVKKIVSFNNGQTFQLTIASLLEMGYQ 161
>gi|311977244|gb|ADQ20500.1| M1.BfuAI [Lysinibacillus fusiformis]
Length = 357
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
Query: 409 VRNGFKSKILPLP--GDVDVICGGPPCQGIS--GYNRFRNVD--SPLDDERNRQIVIFMD 462
+RN K K++ L ++D++ GGPPCQG S G RF N +P +D+RN+ + F+
Sbjct: 54 IRNLTKEKMVELTKNSEIDLVVGGPPCQGFSVFGKRRFINTQGYNPKEDDRNKLVYEFIR 113
Query: 463 IVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKY-QARFGIIAAGCYGLPQFRLR 521
+V LKPKY MENV L DK + + Y + + + A YG+PQ R R
Sbjct: 114 VVRELKPKYFFMENVKGFLSLDKGLFVEEVIKEFKSLGYDKIEYKVFCAADYGVPQKRYR 173
>gi|431758608|ref|ZP_19547233.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium E3083]
gi|430616976|gb|ELB53862.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium E3083]
Length = 352
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 32/169 (18%)
Query: 371 SGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKIL------------ 418
SG GL++ G++ + G+ N + F N S+IL
Sbjct: 12 SGAGGLSYGFELAGFNV-------LLGIDNDETALNTFKMNHKNSEILCGDITEVSYTKD 64
Query: 419 --PLPGD--VDVICGGPPCQG--ISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYV 472
P+ GD +DVI GGPPCQG +SG +F +D RN+ + ++ +V+ +KPK
Sbjct: 65 IKPIIGDKRIDVIVGGPPCQGMSLSGPRKF-------EDPRNKLYLSYIRLVKEIKPKAF 117
Query: 473 LMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV+ I+ K + + L M Y +F I+ A YG+PQ R R
Sbjct: 118 VIENVIGIVSLFKGQIKNHILKEFSEMGYNVQFKILLASDYGVPQKRKR 166
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 36/56 (64%), Gaps = 6/56 (10%)
Query: 202 KAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
K EL ++DL+SG GG+S G +L+ N++ +D+D++A + K+NH +++
Sbjct: 2 KTELNIIDLFSGAGGLSYGF----ELAGFNVL--LGIDNDETALNTFKMNHKNSEI 51
>gi|111185554|gb|AAI19484.1| Dnmt1 protein [Mus musculus]
Length = 197
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L+ENV
Sbjct: 108 LPQKGDVEMLCGGPPCQGFSGMNRFNS--RTYSKFKNSLVVSFLSYCDYYRPRFFLLENV 165
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFG 506
+ + + ++ + + L LV M YQ FG
Sbjct: 166 RNFVSYRRSMVLKLTLRCLVRMGYQCTFG 194
>gi|426201069|gb|EKV50992.1| hypothetical protein AGABI2DRAFT_113733 [Agaricus bisporus var.
bisporus H97]
Length = 1362
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 19/119 (15%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
+P PG VD+I G PCQ SG N F+ + P ++ ++ + V++ +PKYV +ENV
Sbjct: 933 VPRPGSVDLITAGFPCQTHSGLNMFKTANDP----KSSLMLTALSWVDYYRPKYVYLENV 988
Query: 478 VDILKFD----KASLGRYA-----------LSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L+F+ +A L R + L+ M+YQ R+ ++ AG YG PQ R+R
Sbjct: 989 AGFLRFNLDTRQAGLHRVEGGVTMGGLKLLVRALLDMRYQVRYSLLQAGHYGTPQRRIR 1047
>gi|393216765|gb|EJD02255.1| S-adenosyl-L-methionine-dependent methyltransferase [Fomitiporia
mediterranea MF3/22]
Length = 1109
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 18/116 (15%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP PG+VD+I GGPPCQ +G NRF+ + DD R I + VEF PKYVL+ENV
Sbjct: 692 LPRPGEVDLIMGGPPCQPYTGLNRFKRI----DDIRQTCIPTLLSYVEFYSPKYVLIENV 747
Query: 478 VDILKFD--------------KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFR 519
IL + + + ++ + L + YQ ++ + YG P R
Sbjct: 748 TSILHYRLKGRQEGRKIVGGVEGGMVKFIVRTLTSLGYQCSLKVLNSVDYGSPHQR 803
>gi|179506952|gb|ACB86652.1| EagI methylase [Pantoea agglomerans]
Length = 401
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G++D++ GGPPCQG S R LDD RN ++ + E LKPK +L+ENV I+
Sbjct: 73 GELDLLAGGPPCQGFSINAPIRT----LDDTRNHLFKDYLRVAEVLKPKAILIENVPGIV 128
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K ++ L M Y I+ AG YG+PQ R R
Sbjct: 129 SLGKGTVVEQIYKELNRMGYSVAHKILFAGHYGVPQMRFR 168
>gi|109638623|ref|YP_656628.1| ORF120 [Ranid herpesvirus 2]
gi|109138110|gb|ABG25588.1| ORF120 [Ranid herpesvirus 2]
Length = 861
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 419 PLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVV 478
P PG V+ + GGPPCQG SG N F + E+ + +V ++ + E PK ++ENV
Sbjct: 495 PRPGQVECLVGGPPCQGFSGCNFFPKGEK--AGEKRQMMVEYLRMCEMYLPKLFILENVQ 552
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + ++ + L +L+ ++Y G++ AG YGLPQ R R
Sbjct: 553 NFTVQEDGAVFKAVLHKLLSLQYSVLCGVVQAGMYGLPQSRRR 595
>gi|317127844|ref|YP_004094126.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522]
gi|315472792|gb|ADU29395.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522]
Length = 360
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 409 VRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLK 468
++N + + L GD+DVI GGPPCQG S NR++ + D RN+ ++ VE
Sbjct: 57 IKNDEITYMFDLTGDIDVIVGGPPCQGFSSANRWQ---KEMADPRNKLFYEYIRFVEVFM 113
Query: 469 PKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
PK VL+ENV IL D + S L ++ Y ++ A +G+PQ RLR
Sbjct: 114 PKVVLIENVRGILTRDNGYARKKIYSILENLGYIVDSAVLDASEFGVPQKRLR 166
>gi|270015149|gb|EFA11597.1| DNA methyltransferase 1 [Tribolium castaneum]
Length = 1882
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP +V++I GGPPCQG SG NRF + L +N +V + + ++ +P ++ENV
Sbjct: 819 LPPKSEVEMIVGGPPCQGFSGMNRFNEGEYSL--FKNSLVVSLLSLCDYYRPLIFVLENV 876
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + + + L LV + YQ R I+ AG +G+PQ R R
Sbjct: 877 RNFMLYKGGLILKLTLQCLVAIGYQVRISIVEAGEFGVPQARRR 920
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 177 PSCTETVPTTATSTFFE-NMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTR 235
P C E VP T + T + P L LD+++GCGG+S G + T+
Sbjct: 724 PDCGELVPPTYSCTRLALREGDERPFGRPLKCLDVFAGCGGLSQGFHAAGVAN-----TK 778
Query: 236 WALDSDKSACESLKLNHPEAQV 257
WA+++DK A ++ + N+ V
Sbjct: 779 WAIENDKPALDTFRHNNRTCHV 800
>gi|330991509|ref|ZP_08315460.1| Modification methylase DdeI [Gluconacetobacter sp. SXCC-1]
gi|329761528|gb|EGG78021.1| Modification methylase DdeI [Gluconacetobacter sp. SXCC-1]
Length = 449
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 14/134 (10%)
Query: 391 SWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLD 450
+W P+ P + + N + S++ + G VD++ GGPPCQG S R R+ D P
Sbjct: 85 AWLPLG-----PNNVVDLAAN-YTSQLAAMAGSVDLLAGGPPCQGFSTNGR-RDPDDP-- 135
Query: 451 DERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALS---RLVHMKYQARFGI 507
R+R + ++DIV ++P+ VL+ENV A G YA + RL + Y + +
Sbjct: 136 --RSRMVEAYLDIVALVRPRLVLLENVRGFQSMPHAGGGTYATATRERLSSLGYDSWADV 193
Query: 508 IAAGCYGLPQFRLR 521
+ A +G+PQ R R
Sbjct: 194 LIASSWGVPQRRPR 207
>gi|189233760|ref|XP_001814230.1| PREDICTED: similar to DNA (cytosine-5-)-methyltransferase
[Tribolium castaneum]
Length = 1187
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP +V++I GGPPCQG SG NRF + L +N +V + + ++ +P ++ENV
Sbjct: 801 LPPKSEVEMIVGGPPCQGFSGMNRFNEGEYSL--FKNSLVVSLLSLCDYYRPLIFVLENV 858
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + + + L LV + YQ R I+ AG +G+PQ R R
Sbjct: 859 RNFMLYKGGLILKLTLQCLVAIGYQVRISIVEAGEFGVPQARRR 902
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 177 PSCTETVPTTATSTFFENMPNHG----PHKAELALLDLYSGCGGMSTGLCLGAKLSCTNL 232
P C E VP T + T G P L LD+++GCGG+S G +
Sbjct: 703 PDCGELVPPTYSCTRLALREGAGQDERPFGRPLKCLDVFAGCGGLSQGFHAAGVAN---- 758
Query: 233 VTRWALDSDKSACESLKLNHPEAQV 257
T+WA+++DK A ++ + N+ V
Sbjct: 759 -TKWAIENDKPALDTFRHNNRTCHV 782
>gi|393216766|gb|EJD02256.1| S-adenosyl-L-methionine-dependent methyltransferase, partial
[Fomitiporia mediterranea MF3/22]
Length = 1118
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP PG+VD+I GGPPCQ SG N ++ V DD R I + VEF PKYV +ENV
Sbjct: 694 LPSPGEVDLIMGGPPCQPFSGMNSWKRV----DDIRQTCIPTVLSYVEFYSPKYVCIENV 749
Query: 478 VDILKFD--------------KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L + ++ + ++ + + YQ + ++ A YG PQ R R
Sbjct: 750 TGLLYYRLKGRQEGRRIVGGIESGMVKFVMRAFTSLGYQCQMKVLNAADYGSPQQRNR 807
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 205 LALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAED 264
L +DL+SG GG++TG+ + T WA++ +A +SLK NH + V N+ +
Sbjct: 610 LRAMDLFSGAGGLTTGMDQSGFIK-----TCWAVERCPAAAQSLKANHADTVVYNQDCSE 664
Query: 265 FLELVKE 271
L+ V E
Sbjct: 665 LLKHVAE 671
>gi|393230538|gb|EJD38142.1| S-adenosyl-L-methionine-dependent methyltransferase [Auricularia
delicata TFB-10046 SS5]
Length = 710
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 19/115 (16%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G +DVIC GPPCQG S N R D P +N I+ + +VE ++P+Y+++ENVV I+
Sbjct: 293 GHIDVICAGPPCQGHSTLNSHRTADDP----KNCLILTALSLVEHIRPRYLVIENVVMIM 348
Query: 482 KFDKASLGR---------------YALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + R S L+ + YQ R G++ AG +G PQ R R
Sbjct: 349 GWRLMAEQRGQGIIRGGETHGGIFLITSILLRLGYQVRIGLLNAGMHGTPQNRRR 403
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNE 260
+K ++ +LD + G GG++ G+ G++ + T++A+DSD+ A ++ NHP A V ++
Sbjct: 207 NKQKMQMLDPFCGAGGLTAGIERGSRC----IQTKFAVDSDEEAAKAFAKNHPHATVFHD 262
Query: 261 AAEDFL 266
A FL
Sbjct: 263 DANSFL 268
>gi|161621504|gb|ABX75256.1| cytosine-5-methyltransferase [Malus x domestica]
Length = 148
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLP VD I GGPPCQG SG NRF S + I+ + ++ +PKY L+ENV
Sbjct: 65 LPLPWQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILASLSFADYFRPKYFLLENV 122
Query: 478 VDILKFDKASLGRYALSRLVHMKYQ 502
+++ F++ R L+ L+ M YQ
Sbjct: 123 RNLVSFNEGQTFRLTLASLLEMGYQ 147
>gi|422024086|ref|ZP_16370586.1| cytosine-specific methyltransferase [Providencia sneebia DSM 19967]
gi|414091279|gb|EKT52966.1| cytosine-specific methyltransferase [Providencia sneebia DSM 19967]
Length = 353
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 9/100 (9%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSP--LDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
+DV+ GGPPCQG+S + P L+D RN+ + F+ IV L PKYVL+ENV I+
Sbjct: 70 IDVVIGGPPCQGLS-------LSGPRKLEDPRNQLYLSFIRIVSLLNPKYVLIENVPGII 122
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K + + L + Y F ++ A YG+PQ R R
Sbjct: 123 SLFKGKIKDEIIKSLETLGYTVNFQVLKASEYGVPQHRRR 162
>gi|12229856|sp|P94147.1|MTA1_RUEGE RecName: Full=Modification methylase AgeI; Short=M.AgeI; AltName:
Full=Cytosine-specific methyltransferase AgeI
gi|8037880|gb|AAF71525.1|AF247972_2 AgeI methylase [Thalassobius gelatinovorus]
gi|1695647|dbj|BAA11333.1| ageI metylase [Thalassobius gelatinovorus]
gi|1588637|prf||2209243A AgeI methylase
Length = 429
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Query: 421 PGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI 480
PG VDV+ GGPPCQG S Y + R+ DD RN+ V + VE +PK L+ENVV +
Sbjct: 68 PGQVDVVMGGPPCQGFSTYGQRRD-----DDARNQLYVPYFGFVEEFRPKAFLIENVVGL 122
Query: 481 LKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L ++ ++R + Y A + A YG+PQ R R
Sbjct: 123 LSMSGGAVLADMVARAEALGYAADVVTLDACEYGVPQHRRR 163
>gi|448532943|ref|ZP_21621363.1| DNA-cytosine methyltransferase [Halorubrum hochstenium ATCC 700873]
gi|445706177|gb|ELZ58062.1| DNA-cytosine methyltransferase [Halorubrum hochstenium ATCC 700873]
Length = 396
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 78/171 (45%), Gaps = 23/171 (13%)
Query: 371 SGKRGLNFKVHWKGYSTS--EDSWEPIEGL--RNCPERIKEFVRNGFKSKILPL------ 420
SG GL+ G+ + D WEP RN P+ EFV + P
Sbjct: 33 SGCGGLDLGFERAGFDVALGSDQWEPAAETYRRNFPD--VEFVEEDVRELDAPAIRESVE 90
Query: 421 -----PGDVDVICGGPPCQGISGYNRFR-NVDSPLDDERNRQIVIFMDIVEFLKPKYVLM 474
PG +DV+ GGPPCQG S N + +D D RN F+ +V L+P+ VLM
Sbjct: 91 RAGYDPGGIDVVIGGPPCQGFSRLNNEQIELDEMEKDRRNTLFEEFLRVVSVLEPQLVLM 150
Query: 475 ENVVDILKFDKASLGRYALSRLVH----MKYQARFGIIAAGCYGLPQFRLR 521
ENV D++ + S RY +V Y+ + ++ A YG+PQ R R
Sbjct: 151 ENVRDLINR-QTSDDRYVKDLIVDEFAAHGYKCEYRVLEAEQYGVPQKRRR 200
>gi|153868905|ref|ZP_01998633.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
gi|152074513|gb|EDN71359.1| C-5 cytosine-specific DNA methylase [Beggiatoa sp. PS]
Length = 418
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G++D++ GGPPCQG S R+ LDD+RN ++ + + L PK +L+ENV I+
Sbjct: 99 GEIDLLAGGPPCQGFSINAPIRS----LDDDRNYLFREYISVAQELLPKAILIENVPGII 154
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K ++ S L + Y+ I+ AG YG+PQ R R
Sbjct: 155 SLGKGTVVEKIYSELEQLGYKVNHRILFAGHYGVPQMRFR 194
>gi|302694677|ref|XP_003037017.1| hypothetical protein SCHCODRAFT_103476 [Schizophyllum commune H4-8]
gi|300110714|gb|EFJ02115.1| hypothetical protein SCHCODRAFT_103476, partial [Schizophyllum
commune H4-8]
Length = 1190
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 59/117 (50%), Gaps = 21/117 (17%)
Query: 421 PGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI 480
PGD+DV+ G PCQ S NRFR + D++N I + V FLKPK+V ENV
Sbjct: 791 PGDIDVVVAGFPCQSHSLLNRFRRI----GDKKNNLIWNALSWVGFLKPKFVFFENVPGF 846
Query: 481 LKF----------------DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L++ +K L + + L M YQ RF ++ AG YG PQ R+R
Sbjct: 847 LQYNLLPRQVSANRLEGGIEKGGL-KLCVRALAEMGYQLRFCLMQAGHYGAPQHRVR 902
>gi|388857258|emb|CCF49100.1| related to Cytosine-specific methyltransferase [Ustilago hordei]
Length = 767
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
P PG++D+I GPPCQG S NR + ++ D RN + + V++L+PKY +MENV
Sbjct: 390 FPCPGEIDMISAGPPCQGFSRKNRHAHREAAEKDSRNLLVCSVLGWVDYLRPKYFVMENV 449
Query: 478 ----VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ L + + + + L+ M Y G +G +G PQ R R
Sbjct: 450 EGFTMSRLGGREQGMVKLVMRCLMKMGYAVTCGYAQSGAFGCPQSRKR 497
>gi|341868927|gb|AEK98587.1| domain rearranged methyltransferase 1 [Vitis amurensis]
Length = 137
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +PK+ L+ENV
Sbjct: 60 LPLPGQVDFINGGPPCQGFSGMNRF--TQSTWSKVQCEMILAFLSFADYFRPKFFLLENV 117
Query: 478 VDILKFDKASLGRYALSRLV 497
+ + F+K R L+ L+
Sbjct: 118 RNFVSFNKGQTFRLTLASLL 137
>gi|416389243|ref|ZP_11685287.1| putative 5-methylcytosine methyltransferase [Crocosphaera watsonii
WH 0003]
gi|357264261|gb|EHJ13173.1| putative 5-methylcytosine methyltransferase [Crocosphaera watsonii
WH 0003]
Length = 291
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 19/151 (12%)
Query: 385 YSTSEDSWEPIEGLRNCPERIKEFVRN-------------GFKSKI-LPLPGDVDVICGG 430
Y + +E I G+ N + + F +N SKI + +DVI GG
Sbjct: 21 YGFQQAGFEVIAGIDNWKDALATFQKNHPTSQGILMDLAVASSSKISQQINKSIDVIVGG 80
Query: 431 PPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGR 490
PPCQG S + RN D P RN F+ ++++ +PK ++MENV +++ + +
Sbjct: 81 PPCQGFSISGK-RNPDDP----RNLLYKSFLRVIDYFQPKAIVMENVPNMVSMAQGRIRE 135
Query: 491 YALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L+ L + YQ ++ I+ A YG+PQ R R
Sbjct: 136 QILTDLERLGYQVQYKILLASDYGVPQNRRR 166
>gi|319639604|ref|ZP_07994351.1| cytosine-specific methyltransferase [Neisseria mucosa C102]
gi|317399175|gb|EFV79849.1| cytosine-specific methyltransferase [Neisseria mucosa C102]
Length = 348
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+DVI GGPPCQG S + +DDERN+ F+D V F +PK LMENV +I+
Sbjct: 76 LDVIIGGPPCQGFSIAGK-----RMIDDERNQLYKAFVDFVRFYQPKAFLMENVPNIMSM 130
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K ++ + + Y + I+ A YG+PQ R R
Sbjct: 131 GKGAIKQQITQDFEQLGYIVKSQILMASDYGVPQNRKR 168
>gi|417847800|ref|ZP_12493761.1| putative modification methylase HaeIII [Streptococcus mitis SK1073]
gi|339456198|gb|EGP68791.1| putative modification methylase HaeIII [Streptococcus mitis SK1073]
Length = 351
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 32/169 (18%)
Query: 371 SGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKIL------------ 418
SG GL++ G++ + G+ N + ++ F +N S+IL
Sbjct: 11 SGAGGLSYGFEMAGFNV-------LLGIDNDEKALETFQKNHQNSEILCGDIANISYEED 63
Query: 419 --PLPGD--VDVICGGPPCQG--ISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYV 472
P+ G+ +D+I GGPPCQG +SG +F DD RN+ + ++ +V +KP
Sbjct: 64 IKPIIGEQKIDIIVGGPPCQGMSLSGPRKF-------DDPRNKLYLSYIRLVREIKPTAF 116
Query: 473 LMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV+ I+ K + + M Y+ +F ++ A YG+PQ R R
Sbjct: 117 VIENVIGIVSLFKGQIKDTIIEEFSKMGYKVQFKVLLASDYGVPQNRKR 165
>gi|341868925|gb|AEK98586.1| domain rearranged methyltransferase 1 [Vitis amurensis]
Length = 137
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +PK+ L+ENV
Sbjct: 60 LPLPGQVDFINGGPPCQGFSGMNRFN--QSTWSKVQCEMILAFLSFADYFRPKFFLLENV 117
Query: 478 VDILKFDKASLGRYALSRLV 497
+ + F+K R L+ L+
Sbjct: 118 RNFVSFNKGQTFRLTLASLL 137
>gi|67922668|ref|ZP_00516173.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
gi|67855516|gb|EAM50770.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
Length = 282
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 19/151 (12%)
Query: 385 YSTSEDSWEPIEGLRNCPERIKEFVRN-------------GFKSKI-LPLPGDVDVICGG 430
Y + +E I G+ N + + F +N SKI + +DVI GG
Sbjct: 21 YGFQQAGFEVIAGIDNWKDALATFQKNHPTSQGILMDLAVASSSKISQQINKSIDVIVGG 80
Query: 431 PPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGR 490
PPCQG S + RN D P RN F+ ++++ +PK ++MENV +++ + +
Sbjct: 81 PPCQGFSISGK-RNPDDP----RNLLYKSFLRVIDYFQPKAIVMENVPNMVSMAQGRIRE 135
Query: 491 YALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L+ L + YQ ++ I+ A YG+PQ R R
Sbjct: 136 QILTDLGRLGYQVQYKILLASDYGVPQNRRR 166
>gi|148988375|ref|ZP_01819822.1| cytosine specific DNA methyltransferase [Streptococcus pneumoniae
SP6-BS73]
gi|418166559|ref|ZP_12803215.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA17971]
gi|421211039|ref|ZP_15668023.1| modification methylase DdeI [Streptococcus pneumoniae 2070035]
gi|421231707|ref|ZP_15688352.1| modification methylase DdeI [Streptococcus pneumoniae 2080076]
gi|147926056|gb|EDK77130.1| cytosine specific DNA methyltransferase [Streptococcus pneumoniae
SP6-BS73]
gi|353830155|gb|EHE10285.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA17971]
gi|395573762|gb|EJG34349.1| modification methylase DdeI [Streptococcus pneumoniae 2070035]
gi|395596197|gb|EJG56419.1| modification methylase DdeI [Streptococcus pneumoniae 2080076]
Length = 351
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 32/169 (18%)
Query: 371 SGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKIL------------ 418
SG GL++ G++ + G+ N + ++ F +N S+IL
Sbjct: 11 SGAGGLSYGFEMAGFNV-------LLGIDNDEKALETFQKNHQNSEILCGDIANISYEED 63
Query: 419 --PLPGD--VDVICGGPPCQG--ISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYV 472
P+ G+ +D+I GGPPCQG +SG RF DD RN+ + ++ +V ++P
Sbjct: 64 IKPIIGEQKIDIIVGGPPCQGMSLSGPRRF-------DDPRNKLYLSYIRLVREIQPTAF 116
Query: 473 LMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV+ I+ K + + M Y+ +F ++ A YG+PQ R R
Sbjct: 117 VIENVIGIVSLFKGQIKDTIIEEFSKMGYKVQFKVLLASDYGVPQNRKR 165
>gi|390599489|gb|EIN08885.1| S-adenosyl-L-methionine-dependent methyltransferase, partial
[Punctularia strigosozonata HHB-11173 SS5]
Length = 181
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 55/111 (49%), Gaps = 15/111 (13%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
GD+DVI G PCQ S N +R D P R+R ++ + V +PKY + ENV L
Sbjct: 75 GDIDVILAGFPCQSHSALNMYRKEDDP----RSRLMLTMLSFVHVYQPKYCVFENVPGFL 130
Query: 482 KFDKAS---------LG--RYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++D + +G R L M YQ R G++ AG YG PQ R R
Sbjct: 131 EYDPGAGQEDPEHNKMGGLRLLYHALTTMSYQVRCGVLQAGNYGAPQHRQR 181
>gi|448513883|ref|ZP_21616814.1| DNA-cytosine methyltransferase [Halorubrum distributum JCM 9100]
gi|448526607|ref|ZP_21619876.1| DNA-cytosine methyltransferase [Halorubrum distributum JCM 10118]
gi|445693036|gb|ELZ45199.1| DNA-cytosine methyltransferase [Halorubrum distributum JCM 9100]
gi|445698834|gb|ELZ50872.1| DNA-cytosine methyltransferase [Halorubrum distributum JCM 10118]
Length = 400
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 77/171 (45%), Gaps = 23/171 (13%)
Query: 371 SGKRGLNFKVHWKGYSTS--EDSWEPIEGL--RNCPERIKEFVRNGFKSKILPL------ 420
SG GL+ G+ + D WEP RN P+ EFV + P
Sbjct: 37 SGCGGLDLGFERAGFDVALGSDQWEPAAETYRRNFPD--TEFVEEDVRELDAPAIREAVA 94
Query: 421 -----PGDVDVICGGPPCQGISGYNRFR-NVDSPLDDERNRQIVIFMDIVEFLKPKYVLM 474
P VDV+ GGPPCQG S N + +D D RN F+ +V L+P+ VLM
Sbjct: 95 GAGYDPDGVDVVIGGPPCQGFSRLNNEQIELDEMEKDRRNTLFEEFLRVVSVLEPQLVLM 154
Query: 475 ENVVDILKFDKASLGRYALSRLVH----MKYQARFGIIAAGCYGLPQFRLR 521
ENV D++ + S RY +V Y+ + ++ A YG+PQ R R
Sbjct: 155 ENVRDLINR-QTSDDRYVKDLIVDEFAAHGYKCEYRVLEAEQYGVPQKRRR 204
>gi|448451310|ref|ZP_21592793.1| DNA-cytosine methyltransferase [Halorubrum litoreum JCM 13561]
gi|445810744|gb|EMA60760.1| DNA-cytosine methyltransferase [Halorubrum litoreum JCM 13561]
Length = 400
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 77/171 (45%), Gaps = 23/171 (13%)
Query: 371 SGKRGLNFKVHWKGYSTS--EDSWEPIEGL--RNCPERIKEFVRNGFKSKILPL------ 420
SG GL+ G+ + D WEP RN P+ EFV + P
Sbjct: 37 SGCGGLDLGFERAGFDVALGSDQWEPAAETYRRNFPD--TEFVEEDVRELDAPAIREAVA 94
Query: 421 -----PGDVDVICGGPPCQGISGYNRFR-NVDSPLDDERNRQIVIFMDIVEFLKPKYVLM 474
P VDV+ GGPPCQG S N + +D D RN F+ +V L+P+ VLM
Sbjct: 95 GAGYDPDGVDVVIGGPPCQGFSRLNNEQIELDEMEKDRRNTLFEEFLRVVSVLEPQLVLM 154
Query: 475 ENVVDILKFDKASLGRYALSRLVH----MKYQARFGIIAAGCYGLPQFRLR 521
ENV D++ + S RY +V Y+ + ++ A YG+PQ R R
Sbjct: 155 ENVRDLINR-QTSDDRYVKDLIVDEFAAHGYKCEYRVLEAEQYGVPQKRRR 204
>gi|448427452|ref|ZP_21583767.1| DNA-cytosine methyltransferase [Halorubrum terrestre JCM 10247]
gi|445678139|gb|ELZ30633.1| DNA-cytosine methyltransferase [Halorubrum terrestre JCM 10247]
Length = 426
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 77/171 (45%), Gaps = 23/171 (13%)
Query: 371 SGKRGLNFKVHWKGYSTS--EDSWEPIEGL--RNCPERIKEFVRNGFKSKILPL------ 420
SG GL+ G+ + D WEP RN P+ EFV + P
Sbjct: 63 SGCGGLDLGFERAGFDVALGSDQWEPAAETYRRNFPD--TEFVEEDVRELDAPAIREAVA 120
Query: 421 -----PGDVDVICGGPPCQGISGYNRFR-NVDSPLDDERNRQIVIFMDIVEFLKPKYVLM 474
P VDV+ GGPPCQG S N + +D D RN F+ +V L+P+ VLM
Sbjct: 121 GAGYDPDGVDVVIGGPPCQGFSRLNNEQIELDEMEKDRRNTLFEEFLRVVSVLEPQLVLM 180
Query: 475 ENVVDILKFDKASLGRYALSRLVH----MKYQARFGIIAAGCYGLPQFRLR 521
ENV D++ + S RY +V Y+ + ++ A YG+PQ R R
Sbjct: 181 ENVRDLIN-RQTSDDRYVKDLIVDEFAAHGYKCEYRVLEAEQYGVPQKRRR 230
>gi|338999490|ref|ZP_08638133.1| hypothetical protein GME_15605 [Halomonas sp. TD01]
gi|338763639|gb|EGP18628.1| hypothetical protein GME_15605 [Halomonas sp. TD01]
Length = 394
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 405 IKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
I++ K K+ ++D++ GGPPCQG S R+ LDDERN F+ I
Sbjct: 57 IRQLCAVDLKGKLNLEENELDLVAGGPPCQGFSVNAPIRD----LDDERNHLFKDFLRIA 112
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L PK +L+ENV I+ K ++ + L Y+ I+ AG YG+PQ R R
Sbjct: 113 FELMPKAILIENVPGIVSLGKGTVVKQIYKELESRGYRVEHRILYAGHYGVPQLRFR 169
>gi|242217704|ref|XP_002474649.1| predicted protein [Postia placenta Mad-698-R]
gi|220726179|gb|EED80137.1| predicted protein [Postia placenta Mad-698-R]
Length = 1157
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 57/118 (48%), Gaps = 19/118 (16%)
Query: 419 PLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVV 478
P PG +D I G PCQ S N F+ D D ++ I+ + V FL+P++ L ENV
Sbjct: 767 PTPGQIDCIIAGFPCQPHSQLNMFQRAD----DRKSHLILNLLSWVNFLQPRFCLFENVR 822
Query: 479 DILKFD--KASLGRY---------ALSRLVH----MKYQARFGIIAAGCYGLPQFRLR 521
L ++ GRY L LVH M YQ RF ++ A YG PQ R+R
Sbjct: 823 GFLSYNLNATQAGRYRVEGGIKMGGLKFLVHSLLAMNYQVRFALLQAAHYGTPQSRIR 880
>gi|403413292|emb|CCL99992.1| predicted protein [Fibroporia radiculosa]
Length = 671
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 61/136 (44%), Gaps = 36/136 (26%)
Query: 418 LPLPGDVDVICGG------------------PPCQGISGYNRFRNVDSPLDDERNRQIVI 459
+P PG+VD I GG PPCQ SG N ++ D D RN +
Sbjct: 247 MPKPGEVDFIYGGNYCAFILIDAIVICSFTGPPCQSFSGMNHYKRAD----DIRNTLVCN 302
Query: 460 FMDIVEFLKPKYVLMENVVDILKFD--------------KASLGRYALSRLVHMKYQARF 505
+ VEF +P Y L+ENV +L + K + ++ L LV + YQ RF
Sbjct: 303 MLSYVEFYQPLYFLLENVTGLLFYPLNGRQEGRAIVGGVKMGVVKFILRTLVSLGYQVRF 362
Query: 506 GIIAAGCYGLPQFRLR 521
++ AG YG PQ R R
Sbjct: 363 KVLQAGQYGSPQDRKR 378
>gi|313667095|gb|ADR72992.1| M2.BspMI [Bacillus sp. M(2010)]
Length = 353
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDS----PLDDERNRQIVIFMDIVEFLKPKYVLMENVV 478
DVD++ GGPPCQG S + + R +++ P +D RN+ + ++ +V+ L+PKY MENV
Sbjct: 69 DVDLVVGGPPCQGYSMFGKRRFINTQGYDPQEDPRNKLVYEYIRVVKILRPKYFFMENVK 128
Query: 479 DILKFDKASLGRYALSRLVHMKY-QARFGIIAAGCYGLPQFRLR 521
L D + + + Y + ++ A +G+PQ R R
Sbjct: 129 GFLSLDNGQFLKTVIQEFEELGYDNIKCEVVCAADFGVPQQRYR 172
>gi|343427737|emb|CBQ71263.1| related to Cytosine-specific methyltransferase [Sporisorium
reilianum SRZ2]
Length = 768
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 405 IKEFVRNGFKSKILPLP--GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMD 462
++ + ++ +P P G VDVI GPPCQG S NR ++ D RN + +
Sbjct: 369 LRRAISGRLSAQGVPFPQRGQVDVISAGPPCQGFSHRNRTAPREAAQQDPRNLLVCTVLG 428
Query: 463 IVEFLKPKYVLMENVVDI----LKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQF 518
VE L+PKY+++ENV L K + + + L+ + Y A G + +G G PQ
Sbjct: 429 WVEHLQPKYLILENVEGFTDSKLGGRKQGMVKLVMKCLLDLGYAATCGFVQSGASGCPQS 488
Query: 519 RLR 521
R R
Sbjct: 489 RGR 491
>gi|365120060|ref|ZP_09337880.1| DNA (cytosine-5-)-methyltransferase [Tannerella sp. 6_1_58FAA_CT1]
gi|363647912|gb|EHL87106.1| DNA (cytosine-5-)-methyltransferase [Tannerella sp. 6_1_58FAA_CT1]
Length = 334
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 11/111 (9%)
Query: 415 SKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLM 474
S+I GDVDVI GGPPCQG S NR++ ++D RN+ ++ V+ + PK +++
Sbjct: 63 SQIEEEYGDVDVIVGGPPCQGFSSANRWQ---KEMEDPRNKLFFEYIRFVQKIHPKVIMI 119
Query: 475 ENVVDILKFDKASLGRYALSRLVHM----KYQARFGIIAAGCYGLPQFRLR 521
ENV +L D YA+ R+ + +Y + ++ A YG+PQ R R
Sbjct: 120 ENVRGLLTRDNG----YAIERIKEILGAEEYNITYQVLDASEYGVPQNRKR 166
>gi|289167785|ref|YP_003446054.1| site-specific DNA methylase [Streptococcus mitis B6]
gi|288907352|emb|CBJ22189.1| site-specific DNA methylase [Streptococcus mitis B6]
Length = 351
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 82/169 (48%), Gaps = 32/169 (18%)
Query: 371 SGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKIL------------ 418
SG GL++ G++ + G+ N + ++ F +N S+IL
Sbjct: 11 SGAGGLSYGFEMAGFNV-------LLGIDNDEKALETFQKNHQNSEILCGDIANISYEED 63
Query: 419 --PLPGD--VDVICGGPPCQG--ISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYV 472
P+ G+ +D+I GGPPCQG +SG +F DD RN+ + ++ +V ++P
Sbjct: 64 IKPIIGEQKIDIIVGGPPCQGMSLSGPRKF-------DDPRNKLYLSYIRLVREIQPTAF 116
Query: 473 LMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV+ I+ K + + M Y+ +F ++ A YG+PQ R R
Sbjct: 117 VIENVIGIVSLFKGQIKDTIIEEFSKMGYKVQFKVLLASDYGVPQNRKR 165
>gi|422855124|ref|ZP_16901782.1| modification methylase DdeI [Streptococcus sanguinis SK1]
gi|327463101|gb|EGF09422.1| modification methylase DdeI [Streptococcus sanguinis SK1]
Length = 351
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 32/169 (18%)
Query: 371 SGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKIL------------ 418
SG GL++ G++ + G+ N + ++ F +N SK+L
Sbjct: 11 SGAGGLSYGFEAAGFNV-------LLGIDNDEKALETFRKNHKNSKVLCGDITNISYEED 63
Query: 419 --PLPGD--VDVICGGPPCQG--ISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYV 472
P+ G+ VD+I GGPPCQG +SG +F DD RN+ + ++ +V ++P
Sbjct: 64 IKPIIGEQKVDLIVGGPPCQGMSLSGPRKF-------DDPRNKLYLSYIRLVREIQPTAF 116
Query: 473 LMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV+ I+ K + + M Y+ +F ++ A YG+PQ R R
Sbjct: 117 VIENVIGIVSLFKGHIKDAIIEEFSKMGYKVQFKVLLASDYGVPQNRKR 165
>gi|363580908|ref|ZP_09313718.1| DNA-cytosine methyltransferase [Flavobacteriaceae bacterium HQM9]
Length = 346
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
+VDVI GGPPCQG S + ++DERN+ F++ VE KPK LMENV +I+
Sbjct: 72 EVDVIIGGPPCQGFSIAGK-----RIIEDERNQLYKTFVNFVEHFKPKAFLMENVPNIMS 126
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + ++ Y+ I+ A YG+PQ R R
Sbjct: 127 MGNGVIRNQIIKDFENLGYKVSHQILLASDYGVPQNRKR 165
>gi|392571000|gb|EIW64172.1| S-adenosyl-L-methionine-dependent methyltransferase [Trametes
versicolor FP-101664 SS1]
Length = 1239
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 57/118 (48%), Gaps = 19/118 (16%)
Query: 419 PLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV- 477
P PGD+D I G PCQ S N F+ + D + I+ + V+FL+PKY ENV
Sbjct: 831 PCPGDIDCIVAGFPCQPHSQLNMFKKAN----DRKTNLILNLLSWVDFLRPKYCFFENVR 886
Query: 478 ---VDILKFDKASLGR-----------YALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L +AS R + L+ M YQ RFG++ AG YG PQ R+R
Sbjct: 887 GFLSSTLHARQASKYRVEGGIKMGGLKFLTRSLLAMGYQVRFGLLQAGHYGTPQARVR 944
>gi|374586019|ref|ZP_09659111.1| DNA-cytosine methyltransferase [Leptonema illini DSM 21528]
gi|373874880|gb|EHQ06874.1| DNA-cytosine methyltransferase [Leptonema illini DSM 21528]
Length = 340
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 421 PGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI 480
PG++D++ G PPCQG S R RN +P+ DERN I F+ + L+PK +LMENV +
Sbjct: 71 PGELDLLAGCPPCQGFSTI-RTRNKPNPVADERNELIFDFLRLALALRPKAILMENVPGL 129
Query: 481 LKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+K + L + A RL Y +I A +G+PQ R R
Sbjct: 130 MKDRR--LEKTA-RRLRAAGYDVEVDVIDAADFGVPQRRKR 167
>gi|409990103|ref|ZP_11273531.1| hypothetical protein APPUASWS_04335 [Arthrospira platensis str.
Paraca]
gi|291571237|dbj|BAI93509.1| type II DNA modification methyltransferase [Arthrospira platensis
NIES-39]
gi|409939035|gb|EKN80271.1| hypothetical protein APPUASWS_04335 [Arthrospira platensis str.
Paraca]
Length = 451
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 13/104 (12%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
GD+D++ GGPPCQG S Y + PLD +RNR F+ +E +PK +MENVV IL
Sbjct: 74 GDLDILLGGPPCQGFSTYGK----RDPLD-QRNRLYRYFLKFLEEFRPKAFVMENVVGIL 128
Query: 482 KFDKASLGRYALSRLVHMKYQARFGI----IAAGCYGLPQFRLR 521
+ G Y + +V+ + +G+ + A +G+PQFR R
Sbjct: 129 SLE----GGYVVEDIVNKAEKLNYGVSVITLDAVDFGVPQFRKR 168
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Query: 208 LDLYSGCGGMSTGL-CLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDF 265
+DL++G GGM+TG G KL N D D++A +L NHPEA +E+ E
Sbjct: 9 IDLFAGAGGMTTGFKNQGFKLLFAN-------DCDQAALATLSHNHPEAMTSSESIESL 60
>gi|79835456|gb|ABB52087.1| Mod [Arthrospira platensis]
Length = 443
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 13/104 (12%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
GD+D++ GGPPCQG S Y + PLD +RNR F+ +E +PK +MENVV IL
Sbjct: 74 GDLDILLGGPPCQGFSTYGK----RDPLD-QRNRLYRYFLKFLEEFRPKAFVMENVVGIL 128
Query: 482 KFDKASLGRYALSRLVHMKYQARFGI----IAAGCYGLPQFRLR 521
+ G Y + +V+ + +G+ + A +G+PQFR R
Sbjct: 129 SLE----GGYVVEDIVNKAEKLNYGVSVITLDAVDFGVPQFRKR 168
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Query: 208 LDLYSGCGGMSTGL-CLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDF 265
+DL++G GGM+TG G KL N D D++A +L NHPEA +E+ E
Sbjct: 9 IDLFAGAGGMTTGFKNQGFKLLFAN-------DCDQAALATLSHNHPEAMTSSESIESL 60
>gi|206975132|ref|ZP_03236046.1| modification methylase HaeIII [Bacillus cereus H3081.97]
gi|206746553|gb|EDZ57946.1| modification methylase HaeIII [Bacillus cereus H3081.97]
Length = 352
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Query: 399 RNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIV 458
RN + + K+ P G +DVI GGPPCQG S + + ++ D+RN
Sbjct: 45 RNTKMIVGDIAELDIKNVFCPYVGKIDVIIGGPPCQGFSQKGQRKTIN----DDRNFLFK 100
Query: 459 IFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQF 518
F+ +V +KP Y +MENV ++L +K + + Y G++ A +G+PQ
Sbjct: 101 YFVSVVGLIKPMYFVMENVPNLLTAEKGYFKKEIYDLFKSLGYSLSSGVLNAADFGVPQN 160
Query: 519 RLR 521
R R
Sbjct: 161 RKR 163
>gi|393245839|gb|EJD53349.1| S-adenosyl-L-methionine-dependent methyltransferase [Auricularia
delicata TFB-10046 SS5]
Length = 787
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 59/115 (51%), Gaps = 18/115 (15%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
+VDVIC G PCQG S N R S + N+Q++ + +VE L+P+YV +ENV I K
Sbjct: 383 NVDVICAGVPCQGHSRLNIHRG--SKEGEHNNQQMLTALSLVEVLRPRYVCIENVPAIDK 440
Query: 483 F----------------DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ D R ++ L+ + YQ R GI+ AG YG PQ R R
Sbjct: 441 WALKMRRETDDGIPIAADPHGGLRLTITILLALGYQVRVGILQAGNYGTPQSRRR 495
>gi|448434340|ref|ZP_21586150.1| DNA-cytosine methyltransferase [Halorubrum tebenquichense DSM
14210]
gi|445685256|gb|ELZ37611.1| DNA-cytosine methyltransferase [Halorubrum tebenquichense DSM
14210]
Length = 392
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 371 SGKRGLNFKVHWKGYSTS--EDSWEPIEGL--RN------CPERIKEFVRNGFKSKILPL 420
SG GL+ G+ + D WEP RN E ++E + +
Sbjct: 29 SGCGGLDLGFERAGFDVALGSDQWEPAAETYRRNFSDVGFVEEDVRELDAAAIRESVERA 88
Query: 421 ---PGDVDVICGGPPCQGISGYNRFR-NVDSPLDDERNRQIVIFMDIVEFLKPKYVLMEN 476
PG VDV+ GGPPCQG S N + +D D RN F+ +V L+P+ VLMEN
Sbjct: 89 GYDPGGVDVVIGGPPCQGFSRLNNEQIELDEMEKDRRNTLFEEFLRVVSVLEPQLVLMEN 148
Query: 477 VVDILKFDKASLGRYALSRLVH----MKYQARFGIIAAGCYGLPQFRLR 521
V D++ + S RY +V Y+ + ++ A YG+PQ R R
Sbjct: 149 VRDLIN-RQTSDDRYVKDLIVDEFAAHGYKCEYRVLEAEQYGVPQKRRR 196
>gi|341868929|gb|AEK98588.1| domain rearranged methyltransferase 1 [Vitis amurensis]
Length = 137
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPLPG VD I GGPPCQG SG NRF S + I+ F+ ++ +P++ L+ENV
Sbjct: 60 LPLPGQVDFINGGPPCQGFSGMNRFN--QSTWSKVQCEMILAFLSFADYFRPRFFLLENV 117
Query: 478 VDILKFDKASLGRYALSRLV 497
+ + F+K R ++ L+
Sbjct: 118 RNFVSFNKGQTFRLTVALLL 137
>gi|392567063|gb|EIW60238.1| S-adenosyl-L-methionine-dependent methyltransferase [Trametes
versicolor FP-101664 SS1]
Length = 1101
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 18/118 (15%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP PG+VD I GGPPCQ S N + +D R+ + + VE+ +P + L+ENV
Sbjct: 678 LPQPGEVDFIYGGPPCQSFSNMNHHKKA----NDIRSTLVCNMISYVEYYRPMFFLLENV 733
Query: 478 VDILKFD--------------KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
V +L + + + ++ L L + YQ F ++ AG +G PQ R R
Sbjct: 734 VGMLSYRLGGEQDHNRVVGGIEMGVVKFILGSLTILGYQVHFKVLQAGQHGAPQGRRR 791
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 96/225 (42%), Gaps = 22/225 (9%)
Query: 53 FDLGDCAYIKGEGTQKH---IGKILEFFKTTDGEEYFRVQWFYRAEDTVMKEAAD---FH 106
F + D Y+ G I +I EF D V + R DTV +D H
Sbjct: 438 FHVNDFIYLHTPGQVAGLLGIAQITEFIHHDDLCLEASVLHYGRY-DTVAVSDSDGWPIH 496
Query: 107 -DRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDFYFDMEYCVEYSTFRT 165
D +RLF + V+ ++ I K V + P ++ + D +F + E ++
Sbjct: 497 LDNRRLFRTGVLTQVSIEQICGKAYV--MCPSSAWQAEAFVQLDDHFYCDLWSESLKPKS 554
Query: 166 LLTGKIHDLSLPSCTETVPTTATSTFFEN---MPNHGPHKAELALLDLYSGCGGMSTGLC 222
+ ++ + S S + + T E M +GP L L+L++G GG+STGL
Sbjct: 555 MDELEVLEPSEFSSCDACYSAFMDTVLEKERLMKLYGP----LRGLELFAGAGGLSTGLD 610
Query: 223 LGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLE 267
+ + TRWA++ SA + K NHP+ V ++ + LE
Sbjct: 611 MSGMVQ-----TRWAVEFSPSAARTYKANHPDTIVYSQCSNKLLE 650
>gi|403417903|emb|CCM04603.1| predicted protein [Fibroporia radiculosa]
Length = 1212
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 19/118 (16%)
Query: 419 PLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVV 478
P PG +D I G PCQ S N F+ + D ++ I+ + ++FL+PKY +ENV
Sbjct: 838 PKPGQIDCIVAGFPCQPHSRLNMFQRAN----DRKSHLILNLLSWIDFLRPKYCFLENVR 893
Query: 479 DILKF--DKASLGRY-------------ALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L + + GRY + L+ M YQ R G++ A YG PQ R+R
Sbjct: 894 GFLSYSLNATQAGRYRVEGGIAMGGLKFVIHALLAMNYQVRMGLLQAAHYGTPQTRVR 951
>gi|209546991|ref|YP_002278909.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209538235|gb|ACI58169.1| DNA-cytosine methyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 355
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 426 VICGGPPCQGISGYN-RFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFD 484
V+ GGPPCQG S N R R+ D+P +N F+ +VE LKP++V+ ENV IL+ D
Sbjct: 68 VLFGGPPCQGFSTSNQRTRHADNP----KNWLFREFLRMVETLKPEWVVFENVAGILQTD 123
Query: 485 KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L M Y+ FGI+ A +G PQ R R
Sbjct: 124 GGRFAEAFREQLKAMGYRIAFGILNAADFGCPQRRSR 160
>gi|448542558|ref|ZP_21624720.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-646]
gi|445707037|gb|ELZ58903.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-646]
Length = 368
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 421 PGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI 480
P DVDVI GGPPCQG S R D ++DERN F++ V +P + +MENVV +
Sbjct: 21 PDDVDVIVGGPPCQGFSSIRPDRGDD--VEDERNGLYSDFIEYVSHYEPDFFIMENVVGL 78
Query: 481 LKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ L ++ Y A + I+ +GLPQ R R
Sbjct: 79 ATHEDGDTISQILEDAKNIGYSADWRILNGANFGLPQRRER 119
>gi|395333804|gb|EJF66181.1| S-adenosyl-L-methionine-dependent methyltransferase [Dichomitus
squalens LYAD-421 SS1]
Length = 1200
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 58/126 (46%), Gaps = 18/126 (14%)
Query: 410 RNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKP 469
+ G +P G+VD I GGPPCQ S N + +D P R+ + VEF +P
Sbjct: 778 KTGTNLPPMPQRGEVDFIYGGPPCQSFSQINHNKKIDDP----RSTLACNMISYVEFYRP 833
Query: 470 KYVLMENVVDILK-----------FDK---ASLGRYALSRLVHMKYQARFGIIAAGCYGL 515
Y L+ENV IL D+ + ++ L L + YQ F I+ AG YG
Sbjct: 834 MYFLLENVRGILNAPTDGQPRDQPLDRNICMGVVKFILRSLTALGYQVHFRILQAGQYGT 893
Query: 516 PQFRLR 521
PQ R R
Sbjct: 894 PQGRQR 899
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 14/206 (6%)
Query: 65 GTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVDC 124
G HIG+++EF + E +V+ F R D V+K+ A D +RLF + V+ +
Sbjct: 571 GNLLHIGQVVEFSDLSCEEPMVQVRRFGRY-DHVVKDKAIPSDNRRLFMTDVIISVKMKA 629
Query: 125 IISKVIVAQIPPKIGLKSNSIPSSDFYFDMEYCVEYSTFRTLLTGKI-HDLSLPSCTETV 183
+ K VA P + + + D + YC ++ T + +I +L C
Sbjct: 630 VEGKAFVA-CPSSPWQREQWVKADDHF----YCDLFAKSLTPQSLEILQPTALVHCNRCY 684
Query: 184 PTTATSTFFENMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKS 243
E + ++L L+L++G GG+STGL L + TRWA++ +S
Sbjct: 685 AAVLEEATEEELLLKT--SSKLRGLELFAGAGGLSTGLDLSGFVE-----TRWAVELSES 737
Query: 244 ACESLKLNHPEAQVRNEAAEDFLELV 269
AC++ + NH + V N+ L+ V
Sbjct: 738 ACKTFQANHQSSLVYNQNTSTLLQHV 763
>gi|448549957|ref|ZP_21628562.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-645]
gi|445713005|gb|ELZ64786.1| DNA-cytosine methyltransferase [Haloferax sp. ATCC BAA-645]
Length = 416
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 421 PGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI 480
P DVDVI GGPPCQG S R D ++DERN F++ V +P + +MENVV +
Sbjct: 69 PDDVDVIVGGPPCQGFSSIRPDRGDD--VEDERNGLYSDFIEYVSHYEPDFFIMENVVGL 126
Query: 481 LKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ L ++ Y A + I+ +GLPQ R R
Sbjct: 127 ATHEDGDTISQILEDAKNIGYSADWRILNGANFGLPQRRER 167
>gi|443920769|gb|ELU40612.1| C5-DNA-methyltransferase [Rhizoctonia solani AG-1 IA]
Length = 1230
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 56/128 (43%), Gaps = 30/128 (23%)
Query: 420 LPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LPG DVD IC GPPCQ SG NRFR P R I+ M V+ +PKY L+ENV
Sbjct: 812 LPGRYDVDFICAGPPCQSFSGANRFRKDTDP----RTTMIIAVMAAVDHYRPKYFLVENV 867
Query: 478 VDIL------------------------KFDKASLGRYALSRLVHMKYQARFGIIAAGCY 513
+ L + + + R+ + + Y R GI+ A +
Sbjct: 868 PNALTNRILGPSARGRSSDSAETDFHEDNYVEQGILRFITRAALDLGYAIRVGILQASEH 927
Query: 514 GLPQFRLR 521
G PQ R R
Sbjct: 928 GAPQHRRR 935
>gi|448677074|ref|ZP_21688568.1| MHphi(C) [Haloarcula argentinensis DSM 12282]
gi|445774722|gb|EMA25737.1| MHphi(C) [Haloarcula argentinensis DSM 12282]
Length = 379
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 356 EVARIVDICYGDPNESG---KRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNG 412
E+ ++DI G S K G N G +E+S E +C + + R G
Sbjct: 5 ELKNVIDIFCGAGGLSAGFSKAGYNI---ITGIDNNENSIETFRANHDCEPIVGDIQREG 61
Query: 413 FKSKI---LPLPG----DVDVICGGPPCQGISGYN-RFRNVDSPLDDERNRQIVIFMDIV 464
S I + G +VD++ GGPPC+G S N R + + PL++ R F++IV
Sbjct: 62 AISDIKDSVSQNGSNIENVDLVIGGPPCRGFSMANVRSDSAEHPLNELPAR----FLEIV 117
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + P+ VL+ENV +L ++RL M Y G++ A +G+PQ R R
Sbjct: 118 QEINPEAVLIENVPRLLTIADGKFKESIIARLEEMGYSTTHGVLEAEKFGVPQKRRR 174
>gi|448671300|ref|ZP_21687239.1| C-5 cytosine-specific DNA methylase [Haloarcula amylolytica JCM
13557]
gi|445765903|gb|EMA17040.1| C-5 cytosine-specific DNA methylase [Haloarcula amylolytica JCM
13557]
Length = 392
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Query: 421 PGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI 480
P DVDV+ GGPPCQG+S R+ D P RN ++ F+D V+ P ++ENV ++
Sbjct: 69 PDDVDVVIGGPPCQGLSSAGH-RDPDDP----RNTLLLWFLDYVDATSPDAFVIENVREL 123
Query: 481 LKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
A L LSR + ++ + I+ A +G+PQ R R
Sbjct: 124 TWDRNADLFDALLSRADELGFETEYQILTASDFGVPQKRKR 164
>gi|430894893|ref|ZP_19484642.1| Alw26I/Eco31I/Esp3I family type II restriction m6 adenine DNA
methyltransferase [Enterococcus faecium E1575]
gi|430555189|gb|ELA94738.1| Alw26I/Eco31I/Esp3I family type II restriction m6 adenine DNA
methyltransferase [Enterococcus faecium E1575]
Length = 940
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Query: 409 VRNGFKSKIL---PLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVE 465
V N + +I+ + +VD+ICGGPPCQG S FR D P RN+ ++ F DI++
Sbjct: 748 VTNEYTKEIIIDTAIQNNVDIICGGPPCQGFS-LAGFRKSDDP----RNKLVLDFADIIK 802
Query: 466 FLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++PK + ENVV +L ++K + + Y+ + YG+PQ R R
Sbjct: 803 NVEPKVFVFENVVGLLSYNKGETFNEIKKMFLALGYKLHAETLDFSDYGVPQRRRR 858
>gi|428781246|ref|YP_007173032.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
gi|428695525|gb|AFZ51675.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
Length = 433
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
D+DV+CGGPPCQG S + LDDERN + F+ +V LKPKY +MENV +
Sbjct: 79 DIDVVCGGPPCQGFSLIGK-----RVLDDERNSLVFHFLRLVLELKPKYFVMENVAGMGI 133
Query: 483 FDKASLGRYALSRLVHMKYQAR--FGIIAAGCYGLPQFRLR 521
L + + YQ + + ++ A +G+PQ R R
Sbjct: 134 GKSQQLLEELIKKFQENGYQVQLPYQVLNASNFGVPQNRKR 174
>gi|119489697|ref|ZP_01622456.1| putative 5-methylcytosine methyltransferase [Lyngbya sp. PCC 8106]
gi|119454434|gb|EAW35583.1| putative 5-methylcytosine methyltransferase [Lyngbya sp. PCC 8106]
Length = 384
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 424 VDVICGGPPCQGIS--GYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
VD+ICGGPPCQG S G N R D+RN F+ IV KP Y++MENV +L
Sbjct: 71 VDLICGGPPCQGFSTIGANDNR-------DKRNFLFFEFLRIVTAFKPDYLIMENVTGLL 123
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ L+ + Y ++AA YG+PQ R R
Sbjct: 124 SRNNEPTLSLILNSFAELGYTIEVRVLAAHHYGVPQARRR 163
>gi|311977245|gb|ADQ20501.1| M2.BfuAI [Lysinibacillus fusiformis]
Length = 342
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVD---SPLDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
++DV+ GGPPCQG S + + + +DERN+ I+ ++ I+ LKPKY ++ENV
Sbjct: 68 EIDVLIGGPPCQGFSTIGKRVSSNFERRTAEDERNKLILEYIRILNQLKPKYFVIENVKG 127
Query: 480 ILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L DK + L Y + ++ YG+PQ R R
Sbjct: 128 LLTMDKGDFIKGVYKELDKTGYDYKLKLLNMADYGVPQLRER 169
>gi|392392195|ref|YP_006428797.1| DNA-methyltransferase Dcm [Desulfitobacterium dehalogenans ATCC
51507]
gi|390523273|gb|AFL99003.1| DNA-methyltransferase Dcm [Desulfitobacterium dehalogenans ATCC
51507]
Length = 359
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G +D++ GGPPCQG S + DDER++ I +MD+V LKPK +MENV +
Sbjct: 65 GSIDLVFGGPPCQGFSVAGKMDP-----DDERSKLIWEYMDVVNILKPKIFVMENVKALG 119
Query: 482 KFDK-ASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K + S+ +SR M Y + ++ A +G+PQ R R
Sbjct: 120 KLQRWQSVREKIVSRAHDMGYTCFYKVLNAADFGVPQKRER 160
>gi|328857943|gb|EGG07057.1| hypothetical protein MELLADRAFT_85954 [Melampsora larici-populina
98AG31]
Length = 883
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 55/114 (48%), Gaps = 14/114 (12%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP PGD D+I G PC S N R + D +N + +EFLKP YV ENV
Sbjct: 446 LPKPGDFDIITAGFPCGSHSTLNVLRKGE----DSKNALCGTALSFIEFLKPTYVYFENV 501
Query: 478 VDILKF-----DKASLGRYALSRL-----VHMKYQARFGIIAAGCYGLPQFRLR 521
+LK + + +A RL + + YQ RFG++ A YG PQ R R
Sbjct: 502 RGLLKTQLVDRETQEILTHAFLRLMCGTMITLDYQLRFGVLQAAQYGTPQERRR 555
>gi|347839917|emb|CCD54489.1| hypothetical protein [Botryotinia fuckeliana]
Length = 983
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 57/123 (46%), Gaps = 19/123 (15%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDD---ERNRQIVIFMDIVEFLKPKYVLM 474
+P GD+D+I GGPPCQG S NR N + L + I F+ V+F +PKY L+
Sbjct: 393 MPAKGDIDMIVGGPPCQGWSRANRKNNPNKILKEPICPMREAIATFLSYVDFYRPKYFLL 452
Query: 475 ENVV----------DILKFD------KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQF 518
ENV DI + K ++ L + YQ + + AG YG+P
Sbjct: 453 ENVPGIKHHPLNGNDIPNYSPDGGPLKNGAMKFIFRFLTSLGYQCQHATLQAGAYGVPSS 512
Query: 519 RLR 521
R R
Sbjct: 513 RKR 515
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNE 260
H + LD++SG GG+S GL + + +A++SD AC++ N P A V N
Sbjct: 307 HGTKFNTLDVFSGAGGLSQGLHESGVIGNS-----YAIESDTVACQTFAKNFPSAIVYNY 361
Query: 261 AAEDFLE 267
A FLE
Sbjct: 362 DANKFLE 368
>gi|384921047|ref|ZP_10021038.1| DNA-cytosine methyltransferase [Citreicella sp. 357]
gi|384465060|gb|EIE49614.1| DNA-cytosine methyltransferase [Citreicella sp. 357]
Length = 374
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
++D + GGPPCQG S YN R + DER+ ++ IVE L PK+++MENV I+
Sbjct: 68 ELDCLAGGPPCQGYSVYNHQRG----MHDERSHLFKEYLRIVEGLMPKWLVMENVTGIMS 123
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + L+ + + Y I+ A YG+PQ R R
Sbjct: 124 AGEGEAFQAVLAGIRGLGYDVEAKILRAEDYGVPQERRR 162
>gi|385221554|ref|YP_005770687.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SouthAfrica7]
gi|317010333|gb|ADU84080.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SouthAfrica7]
Length = 361
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + G K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQAGIKEKVIELAKKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 110 KAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQSRER 166
>gi|386586337|ref|YP_006082739.1| modification methylase HaeIII [Streptococcus suis D12]
gi|353738483|gb|AER19491.1| modification methylase HaeIII [Streptococcus suis D12]
gi|451939649|gb|AGF89780.1| C-5 cytosine-specific DNA methylase [Streptococcus phage phiD12]
Length = 355
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 413 FKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYV 472
+ + L VDV+ GGPPCQG S + + DERN F+ +VE + P Y
Sbjct: 59 LEKEFLQYKNKVDVVVGGPPCQGYSQ----KGSRKTIHDERNFLFKYFVKVVELVSPNYF 114
Query: 473 LMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+MENV ++L +K + ++ + Y I+ A +G+PQ R R
Sbjct: 115 VMENVPNLLTAEKGFFKQELITLFEELGYSLSMEIVDASKFGVPQRRRR 163
>gi|159477138|ref|XP_001696668.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
gi|158282893|gb|EDP08645.1| cytosine-C5 specific DNA methyltransferase [Chlamydomonas
reinhardtii]
Length = 1263
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 24/122 (19%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G+V+++ GGPPCQG SG NR + + + N + ++ +F +P+Y ++ENV+
Sbjct: 810 GEVELLVGGPPCQGFSGLNRHAGSEKAVRN--NSLVGSYLSYCDFYRPRYFILENVMGFT 867
Query: 482 KFD--KASLG--------------------RYALSRLVHMKYQARFGIIAAGCYGLPQFR 519
+ + + G + AL L+ M YQ RFG + AG YG+PQ R
Sbjct: 868 FYKPVQPTEGSHKSRQRRRRSKSSPSVSYFKLALRTLLDMGYQVRFGALNAGNYGVPQSR 927
Query: 520 LR 521
R
Sbjct: 928 KR 929
>gi|84686808|ref|ZP_01014695.1| DNA methylase, C-5 cytosine-specific family protein [Maritimibacter
alkaliphilus HTCC2654]
gi|84665239|gb|EAQ11718.1| DNA methylase, C-5 cytosine-specific family protein
[Rhodobacterales bacterium HTCC2654]
Length = 336
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSP---LDDERNRQIVIFMDIVEFLKPKYVLMENVV 478
G++D++ GGPPCQG S +++P DD+RN + F+ V+ +PK VL+ENV
Sbjct: 6 GELDLVAGGPPCQGFS-------INAPKRSADDDRNSLFLEFLRFVDEFEPKAVLIENVP 58
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ F+ + L L H Y A I+ A +G+PQ R R
Sbjct: 59 GLVSFEGGGTLQAILLALGHHGYSADVKILYAPHFGVPQTRWR 101
>gi|87240603|gb|ABD32461.1| hypothetical protein MtrDRAFT_AC151521g11v2 [Medicago truncatula]
Length = 81
Score = 66.6 bits (161), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 41/71 (57%), Gaps = 22/71 (30%)
Query: 217 MSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLELVKEWQKLC 276
MSTGLCLGAKLS NLVT VR E+AEDFL L+KEW+KLC
Sbjct: 1 MSTGLCLGAKLSSVNLVT----------------------VRKESAEDFLHLLKEWEKLC 38
Query: 277 KRFAVNIVERE 287
KR+ V ER+
Sbjct: 39 KRYNVGDTERK 49
>gi|20068992|gb|AAM09644.1|AF458984_2 m6 adenine and m5 cytosine DNA methyltransferase [Acinetobacter
lwoffii]
Length = 952
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
K KI +D++CGGPPCQG S + +DD RN+ + F++ + + PK V+
Sbjct: 784 KQKIYQYANKIDILCGGPPCQGFSQAGK-----RIIDDPRNQLFLEFIESISVINPKVVV 838
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
MENV L DK + L + Y ++ YG+PQ R R
Sbjct: 839 MENVQGFLTLDKGNFYDQTKELLEELGYVCEGRLLNTVHYGVPQKRKR 886
>gi|109638476|ref|YP_656741.1| ORF86 [Ranid herpesvirus 1]
gi|4219046|gb|AAD12284.1| ORF86 [Ranid herpesvirus 1]
Length = 739
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Query: 405 IKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ +G S P G+V+ + GGPPCQG S NRF + S +N + +++ +
Sbjct: 332 LHALQESGTMSHPWPAVGEVECMVGGPPCQGYSILNRFPHAHS--TKAKNTLVNLYIALA 389
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ KP ++MENV ++ + K + + L Y I+ AG YG+PQ R R
Sbjct: 390 LYYKPAVLIMENVRNLTAYKKGRVLCGVVEMLRGGGYDVMLNILQAGHYGVPQTRQR 446
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 205 LALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEA 255
L +D++SGCGG+S GLC RWA+D+ A ++LK NH A
Sbjct: 276 LHTMDVFSGCGGLSLGLCDAGLCD-----VRWAIDNWPVALDALKANHANA 321
>gi|255020360|ref|ZP_05292428.1| DNA-cytosine methyltransferase [Acidithiobacillus caldus ATCC
51756]
gi|254970280|gb|EET27774.1| DNA-cytosine methyltransferase [Acidithiobacillus caldus ATCC
51756]
gi|408385480|gb|AFU62910.1| site specific DNA modification methylase Dcm [Acidithiobacillus
phage AcaML1]
Length = 449
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 70/154 (45%), Gaps = 18/154 (11%)
Query: 377 NFKVHWKGYSTSED--SWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQ 434
NF V Y++ D +W P E VR +S L G V +I GGPPCQ
Sbjct: 49 NFLVPGAPYASFADWPAWLPKTNHDIVALLKNESVRKHLRS----LRGAVTMIAGGPPCQ 104
Query: 435 GISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF-------DKAS 487
G S R D ERN + +D+VE ++P+ VL+ENV I + S
Sbjct: 105 GFSVGGRRDGAD-----ERNSLVYQMLDMVELVRPRVVLIENVEGIARRFVARPGEASTS 159
Query: 488 LGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + RL + Y + F ++ A +G+PQ R R
Sbjct: 160 VAESVIERLSDLGYTSIFDVLDASLFGVPQSRRR 193
>gi|448482863|ref|ZP_21605634.1| DNA-cytosine methyltransferase [Halorubrum arcis JCM 13916]
gi|445821149|gb|EMA70945.1| DNA-cytosine methyltransferase [Halorubrum arcis JCM 13916]
Length = 400
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 371 SGKRGLNFKVHWKGYSTS--EDSWEPIEGLRNCPERIKEFVRNGFKSKILPL-------- 420
SG GL+ G+ + D WEP EF+ + P
Sbjct: 37 SGCGGLDLGFERAGFDVALGSDQWEPAAETYRRNFADTEFLEGDVRELDAPAIREAVAGA 96
Query: 421 ---PGDVDVICGGPPCQGISGYNRFR-NVDSPLDDERNRQIVIFMDIVEFLKPKYVLMEN 476
P VDV+ GGPPCQG S N + +D D RN F+ +V L+P+ VLMEN
Sbjct: 97 GYDPDGVDVVIGGPPCQGFSRLNNEQIELDEMEKDRRNTLFEEFLRVVSVLEPQLVLMEN 156
Query: 477 VVDILKFDKASLGRYALSRLVH----MKYQARFGIIAAGCYGLPQFRLR 521
V D++ + S RY +V Y+ + ++ A YG+PQ R R
Sbjct: 157 VRDLINR-QTSDDRYVKDLIVDEFAAHGYKCEYRVLEAEQYGVPQKRRR 204
>gi|386858204|ref|YP_006262903.1| methyltransferase protein [Deinococcus gobiensis I-0]
gi|380002924|gb|AFD28110.1| methyltransferase protein [Deinococcus gobiensis I-0]
Length = 536
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 419 PLPGDVDVICGGPPCQGIS--GYNRFRNV----DSPLDDERNRQIVIFMDIVEFLKPKYV 472
P+ +DVI GGPPCQ + G ++ R + ++ D R+R + ++ VE +P +
Sbjct: 122 PVAEGIDVIVGGPPCQAFARVGRSKLREILEHPEAYRQDPRSRLYMEYLKYVEAFQPVAL 181
Query: 473 LMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
LMENV D+L ++ L + Y AR+ ++ A YG+PQ R R
Sbjct: 182 LMENVPDVLNHGGQNIAEETAEFLEDLGYVARYTLLNAAYYGVPQMRER 230
>gi|290968468|ref|ZP_06560007.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1
str. 28L]
gi|290781464|gb|EFD94053.1| DNA (cytosine-5-)-methyltransferase [Megasphaera genomosp. type_1
str. 28L]
Length = 699
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 372 GKRGLNFKVHWKGYSTSEDSWEPIEGL-----RNCPER---IKEFVRNGFKSKILPLP-- 421
G G+++ +H + ++ + + E L N PE I + K KI+ L
Sbjct: 346 GAGGMSYGMHKNSHFVTKVALDINEKLAQTFKENIPESELIIGDIQDKAIKEKIINLSKK 405
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
V++I GGPPCQG S + LDD RN + ++ +V+ LKP ++ENV ++
Sbjct: 406 NKVNMIIGGPPCQGFS----LKGKKLGLDDPRNFLFIEYLHLVQELKPLVFVIENVKSLM 461
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+S + + Y+ GI+ A YG+PQ R R
Sbjct: 462 STSNGWFKNQIISEIKKLGYEVSVGIVRASDYGVPQNRER 501
>gi|449547195|gb|EMD38163.1| hypothetical protein CERSUDRAFT_122915 [Ceriporiopsis subvermispora
B]
Length = 1081
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 18/118 (15%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP PG+VD I GGPPCQ S N + DD R+ + + VE +P Y L+ENV
Sbjct: 665 LPKPGEVDFIFGGPPCQSFSLMNHSKKA----DDIRSTLVCNMLSWVELYRPSYFLIENV 720
Query: 478 VDILKFD--------------KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +L K + ++ + + YQ F ++ AG YG PQ R R
Sbjct: 721 IGMLFHPLGGEQSGRSVVGGVKMGMVKFIVRAATALGYQIHFRVLQAGQYGAPQGRRR 778
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 95/232 (40%), Gaps = 35/232 (15%)
Query: 53 FDLGDCAYIKGEGTQKHIGKILEFFKTTDGEEYFRVQW-FYRAEDTVMK-----EAADF- 105
+ + D Y++ + + ++ +I E G V+ Y D +++ EA
Sbjct: 424 YHISDFVYLRVKSEEAYLYQIAEIVNIEPGGSLPIVEASLYGRYDLILRDLKGNEAWSLP 483
Query: 106 HDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDFYFDM-EYCVEYSTFR 164
D +RLF + + I KV V K L +Y D+ ++ +
Sbjct: 484 KDNRRLFATPTITRVEASAIEGKVYVKPCRTKSELDEWLQADDHYYVDLWAQSPRVTSLK 543
Query: 165 TLLTGKIHDLSLPSCTETVPT--------TATSTFFENMPNHGPHKAELALLDLYSGCGG 216
L+ +CT + P A + F N GP +A LDL+SG GG
Sbjct: 544 ALMNLDY------TCTRSCPQCLHAHDSERAEAKRFLN--QRGPLRA----LDLFSGAGG 591
Query: 217 MSTGLCLGAKLSCTNLV-TRWALDSDKSACESLKLNHPEAQVRNEAAEDFLE 267
+STG L+C++ V T+WA++ SA S + NHP+ V N+ L+
Sbjct: 592 LSTG------LNCSDSVNTKWAVEFSPSAALSYQANHPDTIVYNQCTNLLLQ 637
>gi|304441893|gb|ADM34182.1| DNA methyltransferase 1 [Aplysia californica]
Length = 405
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 433 CQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYA 492
CQG SG NRF + + +N I ++ ++ +P++ L+ENV + + F ++ + + A
Sbjct: 1 CQGFSGMNRFNSRE--YSKFKNSLIASYLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLA 58
Query: 493 LSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L LV M YQ FG++ AG YG+ Q R R
Sbjct: 59 LRCLVRMGYQCTFGVLQAGSYGVAQTRRR 87
>gi|298253558|ref|ZP_06977348.1| site-specific DNA methylase [Gardnerella vaginalis 5-1]
gi|297532325|gb|EFH71213.1| site-specific DNA methylase [Gardnerella vaginalis 5-1]
Length = 317
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+DVI GGPPCQG S + + + D+RN ++ +VE +KPKY +MENV ++L
Sbjct: 30 IDVIIGGPPCQGFSQKGQRKTIY----DKRNFLFEYYVKVVELVKPKYFVMENVPNLLTA 85
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+K + M Y + G++ A +G+PQ R R
Sbjct: 86 EKGYFFNEIETLFNAMGYFLQHGVLNAADFGVPQNRKR 123
>gi|283783021|ref|YP_003373775.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05]
gi|283441534|gb|ADB14000.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05]
Length = 357
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+DVI GGPPCQG S + + + D+RN ++ +VE +KPKY +MENV ++L
Sbjct: 70 IDVIIGGPPCQGFSQKGQRKTIY----DKRNFLFEYYVKVVELVKPKYFVMENVPNLLTA 125
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+K + M Y + G++ A +G+PQ R R
Sbjct: 126 EKGYFFNEIETLFNAMGYFLQHGVLNAADFGVPQNRKR 163
>gi|350272585|ref|YP_004883893.1| putative methyltransferase [Oscillibacter valericigenes Sjm18-20]
gi|348597427|dbj|BAL01388.1| putative methyltransferase [Oscillibacter valericigenes Sjm18-20]
Length = 411
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 12/146 (8%)
Query: 378 FKVHWKGYSTSEDSWEPIEGL--RNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQG 435
V+ K +S +PIE N + + ++ RN + + G+VDV+ GGPPCQG
Sbjct: 104 LNVYKKNFSPQFALDKPIETYIDSNIGDPLSDYERN-----FISMVGNVDVLIGGPPCQG 158
Query: 436 ISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSR 495
S N P RN + + E +KPKY+L+ENV + + DK + A S
Sbjct: 159 NSDLNNHTRRSDP----RNLLYLRMIRCAEIVKPKYILIENVPGV-QHDKHGVVDIAKST 213
Query: 496 LVHMKYQARFGIIAAGCYGLPQFRLR 521
L M Y+ GII G+PQ R R
Sbjct: 214 LEDMGYRLDSGIIDMSAIGVPQKRKR 239
>gi|422878164|ref|ZP_16924630.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis
SK1059]
gi|332367371|gb|EGJ45104.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis
SK1059]
Length = 329
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 10/110 (9%)
Query: 417 ILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMEN 476
+ L G VD++ GGPPCQG S + +N DD RN+ + +++I++ ++PK + EN
Sbjct: 87 LASLSGKVDLVVGGPPCQGFSMAGKRQN-----DDVRNQLMHSYVEIIKLVQPKMLFFEN 141
Query: 477 V----VDILKF-DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
V VD DK + +S L + YQ + II +G+PQ R R
Sbjct: 142 VQGFTVDFKDHKDKKNYSNILISELKRLGYQLDYKIITMSDFGIPQNRKR 191
>gi|56695946|ref|YP_166300.1| C-5 cytosine-specific family DNA methylase [Ruegeria pomeroyi
DSS-3]
gi|56677683|gb|AAV94349.1| DNA methylase, C-5 cytosine-specific family [Ruegeria pomeroyi
DSS-3]
Length = 373
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 421 PGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI 480
PG++ V+ GGPPCQ S YN R + DER ++ IV+ L+P++++MENV I
Sbjct: 70 PGELTVLAGGPPCQAYSVYNHQRG----MHDERATLFKEYLRIVDGLRPEWIVMENVTGI 125
Query: 481 LKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
S L + Y+ ++ A YG+PQ R R
Sbjct: 126 YSIGGGEAVAAIKSELAALGYEVEEAVLRAEEYGVPQERRR 166
>gi|418630145|ref|ZP_13192633.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
VCU127]
gi|374831827|gb|EHR95553.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
VCU127]
Length = 329
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VDVI GGPPCQG S +F + +DD RN+ ++ V LKPK ++ENV ++
Sbjct: 71 VDVIIGGPPCQGFSLAGKFGR--TFIDDPRNQLFKEYLRFVSILKPKIFIIENVARLVSH 128
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+K R + + YQ ++ I+ Y +PQ R R
Sbjct: 129 NKGKTIREIQDSIKKLGYQVKYEILQTSDYNIPQKRQR 166
>gi|421654486|ref|ZP_16094813.1| putative modification methylase HaeIII [Acinetobacter baumannii
Naval-72]
gi|408510257|gb|EKK11919.1| putative modification methylase HaeIII [Acinetobacter baumannii
Naval-72]
Length = 307
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 425 DVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFD 484
DVI GG PCQG S N R D P RN+ + + I+ KPKY + ENV IL D
Sbjct: 63 DVIVGGFPCQGFSQANMKRKADDP----RNKLYLEMIRIISDKKPKYFIAENVRGILSLD 118
Query: 485 KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K + +S + Y + ++ YG+PQ R+R
Sbjct: 119 KGKVIEQIVSDFNELNYNVSYSLLNCADYGVPQKRMR 155
>gi|328543334|ref|YP_004303443.1| DNA methylase [Polymorphum gilvum SL003B-26A1]
gi|326415695|gb|ADZ72758.1| DNA methylase, C-5 cytosine-specific family [Polymorphum gilvum
SL003B-26A1]
Length = 418
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
GD+D + GGPPCQ S N R+ DER R ++ +V L PK ++MENV IL
Sbjct: 90 GDLDCLVGGPPCQSFSHNNHHRSAV----DERARLFEHYLTLVGALNPKTLVMENVPGIL 145
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
D + L+ L + + A G ++A +G PQ R R
Sbjct: 146 SIDGGRVVDEILASLKELGFDAVVGRLSAEEFGTPQLRRR 185
>gi|11138959|gb|AAG31558.1| SgrAIM methylase [Streptomyces griseus]
Length = 429
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G++D++ GGPPCQG S LDD RN+ ++ +++ L+P+ LMENV ++L
Sbjct: 99 GNIDLLFGGPPCQGYSQIG-----TRILDDPRNQLYAEYVRVLKTLRPRVFLMENVPNML 153
Query: 482 KFDKASLGRYALSRLVHMKY-QARFGIIAAGCYGLPQFRLR 521
DK R L+ Y ++AA +G+PQ R R
Sbjct: 154 LMDKGRFKREVLAAFAEAGYSNCGVTVVAASDHGVPQLRRR 194
>gi|429197447|ref|ZP_19189341.1| DNA (cytosine-5-)-methyltransferase [Streptomyces ipomoeae 91-03]
gi|428666814|gb|EKX65943.1| DNA (cytosine-5-)-methyltransferase [Streptomyces ipomoeae 91-03]
Length = 413
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VDVI GGPPCQG S +R +DD RNR V ++ +V + PK ++ENV LK
Sbjct: 90 VDVIMGGPPCQGFSALHRNNPEKPKVDDPRNRLWVEYVRVVRAINPKIFVLENVDRFLKS 149
Query: 484 DKASLGRYALSRLVHM-KYQARFGIIAAGCYGLPQFRLR 521
+ + A S + Y R+ I+ A YG+PQ R R
Sbjct: 150 QEFESLQAATSDGGPLANYTLRWKILNAADYGVPQARRR 188
>gi|404481780|ref|ZP_11017010.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium
OBRC5-5]
gi|404345084|gb|EJZ71438.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium
OBRC5-5]
Length = 180
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 413 FKSKILPLPGD--VDVICGGPPCQG--ISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLK 468
+K I P+ GD +DVI GGPPCQG +SG +F DD RN+ + ++ +V+ ++
Sbjct: 60 YKENIKPIIGDANIDVIIGGPPCQGMSLSGPRKF-------DDPRNKLYLSYIRLVDEIR 112
Query: 469 PKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
PK ++ENV ++ + + + M Y+ + I+ A YG+PQ R R
Sbjct: 113 PKAFVIENVPGLVGLFGGQIKDSIIQKFSDMGYKIEYKILCAADYGVPQMRKR 165
>gi|110643908|ref|YP_671638.1| type II 5-cytosoine methyltransferase [Escherichia coli 536]
gi|110345500|gb|ABG71737.1| putative type II 5-cytosoine methyltransferase [Escherichia coli
536]
Length = 315
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
D DV+ GG PCQG S N RN D DERN+ + F+ +V KPK+ ENV IL
Sbjct: 62 DCDVVIGGFPCQGFSQANLLRNKD----DERNQLYLEFLRVVNAKKPKFFFAENVRGILS 117
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
D + S + Y+ + + YG+PQ R R
Sbjct: 118 LDNGTAIEKIESDFKSLGYKVKKQLFNVADYGVPQMRYR 156
>gi|449541865|gb|EMD32847.1| hypothetical protein CERSUDRAFT_99217 [Ceriporiopsis subvermispora
B]
Length = 1248
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 21/119 (17%)
Query: 419 PLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVV 478
P PG++DV+ G PCQ S N F+ + D + I M ++ KPKYV +ENV
Sbjct: 841 PKPGEIDVLIAGFPCQPHSTLNMFQKAN----DRKTHLIATLMAYIDHYKPKYVFLENVR 896
Query: 479 DILK----------------FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L +K L ++ ++ + + +Q RFG++ A YG PQ R+R
Sbjct: 897 GFLSHALQAVQANRHKVVGGVEKGGL-KWLVATFLELGFQVRFGLLQAAHYGTPQSRVR 954
>gi|426411086|ref|YP_007031185.1| cytosine-specific methyltransferase [Pseudomonas sp. UW4]
gi|426269303|gb|AFY21380.1| cytosine-specific methyltransferase [Pseudomonas sp. UW4]
Length = 424
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 27/146 (18%)
Query: 391 SWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLD 450
SW PIE + +C + F+ N +KS +L L G +D++ GGPPCQG S R RN + P
Sbjct: 54 SWLPIEAM-SC----EAFLEN-YKSHLLKLAGTIDLMVGGPPCQGFSTAGR-RNPEDP-- 104
Query: 451 DERNRQIVIFMDIVEFLKPKYVLMENV---------------VDILKFDKASLGRYALSR 495
RN+ ++++V+ ++P ++++ENV VD K+ S +
Sbjct: 105 --RNKMAEQYLELVKIIRPNFIVIENVSGFNSRFTRKNSDAEVD-GKYITQSYADFICES 161
Query: 496 LVHMKYQARFGIIAAGCYGLPQFRLR 521
L + Y G I +G+PQ R R
Sbjct: 162 LSSLGYAVSRGKINCADFGVPQNRHR 187
>gi|428300014|ref|YP_007138320.1| Xre family transcriptional regulator [Calothrix sp. PCC 6303]
gi|428236558|gb|AFZ02348.1| transcriptional regulator, XRE family [Calothrix sp. PCC 6303]
Length = 484
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 16/151 (10%)
Query: 384 GYSTSEDSWEPIEGLRNCPERIKEFVRN-----GFKSKILPLPGDVD--------VICGG 430
G+ E+ ++ + G+ +R++ F RN + I L D+ VI GG
Sbjct: 128 GFEMHEE-FQVVAGVDLLSDRLQTFSRNHGTANAYGQDINTLSTDILYNENPHPFVIVGG 186
Query: 431 PPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGR 490
PPCQG S FRN++ +D RN F IV L+P++++ ENVV +L +
Sbjct: 187 PPCQGFSSIRPFRNIER--NDPRNNLAEEFCRIVHNLQPEWIVFENVVGLLTHSNGKTFQ 244
Query: 491 YALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + Y+ ++ A YGLPQ R R
Sbjct: 245 TIVEAFEEIGYRTAAKVLNAAYYGLPQCRER 275
>gi|427387312|ref|ZP_18883368.1| DNA (cytosine-5-)-methyltransferase [Bacteroides oleiciplenus YIT
12058]
gi|425725473|gb|EKU88344.1| DNA (cytosine-5-)-methyltransferase [Bacteroides oleiciplenus YIT
12058]
Length = 356
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
++ ++ GGPPCQG S NR +++E N F+ V+ L P++ L ENV ++
Sbjct: 71 NIFILFGGPPCQGFSVSNR---KTRTVENENNGLFKEFLRFVDDLNPEWFLFENVEGLVN 127
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
FDK RY L++ + Y+ I+ A YG+PQ R R
Sbjct: 128 FDKGKTLRYILNQFKKIGYKTSEAILYASDYGVPQHRNR 166
>gi|422928020|ref|ZP_16960962.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis ATCC
29667]
gi|422931016|ref|ZP_16963947.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis SK340]
gi|339617584|gb|EGQ22206.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis ATCC
29667]
gi|339620198|gb|EGQ24768.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis SK340]
Length = 407
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)
Query: 420 LPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV-- 477
L G VD++ GGPPCQG S + +N DD RN+ + +++I++ ++PK + ENV
Sbjct: 90 LSGKVDLVVGGPPCQGFSMAGKRQN-----DDVRNQLMHSYVEIIKLVQPKMLFFENVQG 144
Query: 478 --VDILKF-DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
VD DK + +S L + YQ + II +G+PQ R R
Sbjct: 145 FTVDFKDHKDKKNYSNILISELKRLGYQLDYKIITMSDFGIPQNRKR 191
>gi|34451616|gb|AAQ72364.1| methylase fusion protein [Geobacillus stearothermophilus]
Length = 1007
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
DVD+ICGGPPCQG S R D P RN+ F++IV +KPK ++ ENV IL
Sbjct: 841 DVDIICGGPPCQGFSMAG-LRLTDDP----RNQLFKEFIEIVSRVKPKVIVFENVEGILS 895
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
F + R L + Y + + Y +PQ R R
Sbjct: 896 FQSGKVYRAILEMFSEIGYFTEGRTLMSSDYAVPQKRKR 934
>gi|402224966|gb|EJU05028.1| S-adenosyl-L-methionine-dependent methyltransferase [Dacryopinax sp.
DJM-731 SS1]
Length = 1321
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP PGD D+I GPPCQG S N +R DD +N + + V++ +P++ L+ENV
Sbjct: 923 LPNPGDPDIIICGPPCQGYSVLNSYRRT----DDIKNTLVANALSYVDYFRPRFFLLENV 978
Query: 478 VDIL--------------KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L + + ++ ++ + L YQ R ++ AG +G+ Q R R
Sbjct: 979 QPLLNSRGKVLKPGDIDERIIENAVRKFIVRFLTARGYQVRVTVLQAGEFGVAQHRAR 1036
>gi|347726864|gb|AEP19810.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L +V++I GGPPCQG S N+ +N+ L D RN + +++IV+ +KP+
Sbjct: 60 IKEKVIKLAQTLEVNMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKAIKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +I+ K RL + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQSRER 166
>gi|310657622|ref|YP_003935343.1| Cytosine-specific methyltransferase [[Clostridium] sticklandii]
gi|308824400|emb|CBH20438.1| Cytosine-specific methyltransferase [[Clostridium] sticklandii]
Length = 344
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 9/100 (9%)
Query: 424 VDVICGGPPCQG--ISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
+D+I GGPPCQG +SG +F +D RN + F+ +V+ ++PK ++ENV ++
Sbjct: 69 IDLIVGGPPCQGMSLSGPRKF-------EDPRNELYLSFIRLVKEIQPKAFVIENVPGLV 121
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K + + + M Y+ RF I+ A YG+PQ R R
Sbjct: 122 SLFKGKIKDSIIEKFSEMGYKVRFEIMCASDYGVPQSRKR 161
>gi|332706962|ref|ZP_08427022.1| DNA-methyltransferase [Moorea producens 3L]
gi|332354227|gb|EGJ33707.1| DNA-methyltransferase [Moorea producens 3L]
Length = 450
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 415 SKILPLPGDVDVICGGPPCQGIS-GYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
S+I+ PG++D++ GGPPCQG S +RF DD RN + ++ + L PK+ +
Sbjct: 89 SEIVMKPGELDILIGGPPCQGFSTAGSRF------WDDPRNNLLKQYVKALTILNPKWFI 142
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
MENV +L +K A + + Y R I + YG+PQ R R
Sbjct: 143 MENVEGLLTSNKGKYVYEAAKAFIELGYWIRIEKIYSQEYGIPQRRKR 190
>gi|330997449|ref|ZP_08321300.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT
11841]
gi|329570823|gb|EGG52539.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT
11841]
Length = 357
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VD+I GGPPCQG S RN+D D+RN+ + ++ V KPK L+ENV +
Sbjct: 75 VDIIIGGPPCQGFS-LTGPRNID----DQRNKLYLAMIETVRRFKPKAFLIENVPGMANL 129
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ + R M Y+ I+ A YG+PQ R R
Sbjct: 130 YGGAVKEEIIRRFTQMGYKVSCKIVCAADYGVPQIRKR 167
>gi|153814224|ref|ZP_01966892.1| hypothetical protein RUMTOR_00433 [Ruminococcus torques ATCC 27756]
gi|145848620|gb|EDK25538.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus torques ATCC
27756]
Length = 702
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 414 KSKILPL--PGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKY 471
K+K++ L V++I GGPPCQG S + LDD RN ++ VE LKP+
Sbjct: 408 KAKVIELCKAKKVNMIIGGPPCQGFS----LKGKKLGLDDPRNFLFNEYLRFVEILKPEV 463
Query: 472 VLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +L + ++ M Y +G++ A +G+PQ R R
Sbjct: 464 FVIENVKALLSTSAGWFKDQIIKKVTEMGYHVEYGVLTASDFGVPQARQR 513
>gi|448497515|ref|ZP_21610468.1| DNA-cytosine methyltransferase [Halorubrum coriense DSM 10284]
gi|445699746|gb|ELZ51766.1| DNA-cytosine methyltransferase [Halorubrum coriense DSM 10284]
Length = 399
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 19/169 (11%)
Query: 371 SGKRGLNFKVHWKGYSTS--EDSWEPIEGL--RNCPER------IKEFVRNGFKSKILPL 420
SG GL+ G+ + D WEP RN + ++E + +
Sbjct: 36 SGCGGLDLGFERAGFDVALGSDQWEPAAETYRRNFADTEVLEGDVRELDAPAIRDAVAGA 95
Query: 421 ---PGDVDVICGGPPCQGISGYNRFR-NVDSPLDDERNRQIVIFMDIVEFLKPKYVLMEN 476
P VDV+ GGPPCQG S N + +D D RN F+ +V L+P+ VLMEN
Sbjct: 96 GYDPDGVDVVIGGPPCQGFSRLNNEQIELDEMEKDRRNTLFEEFLRVVSVLEPRLVLMEN 155
Query: 477 VVDILKFDKASLGRYALSRLVH----MKYQARFGIIAAGCYGLPQFRLR 521
V D++ + S RY +V Y+ + ++ A YG+PQ R R
Sbjct: 156 VRDLINR-QTSDDRYVKDLIVDEFAAHGYKCEYRVLEAEQYGVPQKRRR 203
>gi|423314738|ref|ZP_17292671.1| DNA (cytosine-5-)-methyltransferase [Bacteroides vulgatus
CL09T03C04]
gi|392681485|gb|EIY74843.1| DNA (cytosine-5-)-methyltransferase [Bacteroides vulgatus
CL09T03C04]
Length = 388
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 414 KSKILPLPGD--VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKY 471
K KI GD VDVI GGPPCQG S Y +R+ + D+RN+ F+DIV LKPK+
Sbjct: 198 KQKIYEACGDNKVDVILGGPPCQGFS-YAGWRDPN----DQRNQLFRDFVDIVTTLKPKF 252
Query: 472 VLMENVVDILKFDKASLGRYALSRLVHMKYQARFGI-IAAGCYGLPQFRLR 521
+MENV IL K + + Y + + A YG+PQ R R
Sbjct: 253 FVMENVPGILTMRKGEAIKEIIQAFADAGYHVGTPLKLTAADYGVPQKRKR 303
>gi|428779548|ref|YP_007171334.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
gi|428693827|gb|AFZ49977.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
Length = 392
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 424 VDVICGGPPCQGIS--GYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
+D++CGGPPCQG S G N + D+RN F+ I++ LKP YV+MENV +L
Sbjct: 71 IDLVCGGPPCQGFSTIGQNNHQ-------DQRNFLFWEFLRIIKSLKPDYVIMENVTGLL 123
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L + Y+ +++A YG+P+ R R
Sbjct: 124 SRKNEVTLNVILESFTQIGYKVDIKVLSAHHYGVPEKRRR 163
>gi|254470861|ref|ZP_05084264.1| DNA-cytosine methyltransferase [Pseudovibrio sp. JE062]
gi|211960003|gb|EEA95200.1| DNA-cytosine methyltransferase [Pseudovibrio sp. JE062]
Length = 498
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 355 YEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFK 414
+E+A V++ DP+ + G+NF + E +P++ PE + + + G
Sbjct: 39 FEIAGAVEL---DPHAARSHGMNF------HPGLETHAQPVDITSVGPEELAKKLSLGDT 89
Query: 415 SKILPLPGDVDVICGGPPCQGIS--GYNRFRNVDSPLD----DERNRQIVIFMDIVEFLK 468
+D+I GGPPCQ + G + R VD + D R R ++ VE K
Sbjct: 90 DHA------IDIIIGGPPCQAFARVGRPKLREVDEHPEAFRHDPRARLYQEYLHYVEAFK 143
Query: 469 PKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
P VLMENV D L ++ L Y A + ++ A YG+PQ R R
Sbjct: 144 PVAVLMENVPDALNHGGQNIAEEICEVLETKGYVAGYTLLNAAYYGVPQMRER 196
>gi|209523295|ref|ZP_03271851.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|209496446|gb|EDZ96745.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
Length = 387
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 7/108 (6%)
Query: 416 KILPLPGD--VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+I L GD +++ICGGPPCQG S N+D +RN + F+ VE LKP Y++
Sbjct: 66 QIRELIGDRHINLICGGPPCQGFSTIGSNNNLD-----KRNFLFLEFLRFVEQLKPDYII 120
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV +L + L+ L ++ Y +++A YG+P+ R R
Sbjct: 121 IENVTGLLSRKNENTLTSILTCLQNIGYTVDVRVLSAHHYGVPEKRRR 168
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 11/72 (15%)
Query: 203 AELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQ-----V 257
A+ +DL+SG GGMS GL + A C +D DKSA ++ + NHP+A+ +
Sbjct: 6 AKTTFIDLFSGAGGMSCGLEM-AGFECL-----LGVDFDKSAIQTFQNNHPQAETICGDL 59
Query: 258 RNEAAEDFLELV 269
R + E EL+
Sbjct: 60 REISTEQIRELI 71
>gi|420464739|ref|ZP_14963506.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-6]
gi|393082226|gb|EJB82942.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-6]
Length = 361
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L +V++I GGPPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQAAIKEKVIKLAQTLEVNMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 110 KAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|218134306|ref|ZP_03463110.1| hypothetical protein BACPEC_02199 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991681|gb|EEC57687.1| DNA (cytosine-5-)-methyltransferase [[Bacteroides] pectinophilus
ATCC 43243]
Length = 622
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 413 FKSKILPL--PGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K+K++ L V++I GGPPCQG S + LDD RN ++ VE LKP+
Sbjct: 327 IKAKVIELCKAKKVNMIIGGPPCQGFS----LKGKKLGLDDPRNFLFNEYLRFVEILKPE 382
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +L + ++ M Y +G++ A +G+PQ R R
Sbjct: 383 VFVIENVKALLSTSAGWFKDQIIKKVTEMGYHVEYGVLTASDFGVPQARQR 433
>gi|281491831|ref|YP_003353811.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp.
lactis KF147]
gi|281375542|gb|ADA65048.1| C-5 cytosine-specific DNA methylase [Lactococcus lactis subsp.
lactis KF147]
Length = 347
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 32/169 (18%)
Query: 371 SGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKIL------------ 418
SG GL++ GY + G+ N + ++ F +N SK L
Sbjct: 12 SGAGGLSYGFELAGYDI-------LLGIDNDFDALRTFEKNHKNSKTLEGDITQFTYEKD 64
Query: 419 --PLPGD--VDVICGGPPCQG--ISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYV 472
PL D +D+I GGPPCQG +SG +F +D RN + ++ +V ++PK
Sbjct: 65 IKPLINDQKIDIIVGGPPCQGMSLSGPRKF-------EDPRNSLYLSYIRLVSEIRPKAF 117
Query: 473 LMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV + K + + + M Y+ + I+ A +G+PQ R R
Sbjct: 118 VIENVPGLASLFKGQIKDSIIEKFTEMGYKVNYKILVASDFGVPQKRRR 166
>gi|209544778|ref|YP_002277007.1| DNA-cytosine methyltransferase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209532455|gb|ACI52392.1| DNA-cytosine methyltransferase [Gluconacetobacter diazotrophicus
PAl 5]
Length = 435
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
++++ L G VD++ GGPPCQG S N R D P R++ + +++ VE ++P+ +L
Sbjct: 73 ETELAELRGKVDLVAGGPPCQGFS-MNGLRRPDDP----RSKMVDVYLHYVEIVRPRLIL 127
Query: 474 MENVVDILKFDKASLGRYA---LSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENVV + G Y+ RL Y I+ A +G+PQ R R
Sbjct: 128 LENVVGFRSMKHRTGGTYSDYTKRRLEAFGYDTWIEILRAADWGVPQRRPR 178
>gi|162149538|ref|YP_001603999.1| cytosine-specifi methyltransferase DdeI [Gluconacetobacter
diazotrophicus PAl 5]
gi|161788115|emb|CAP57719.1| putative cytosine-specifi methyltransferase DdeI [Gluconacetobacter
diazotrophicus PAl 5]
Length = 435
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
++++ L G VD++ GGPPCQG S N R D P R++ + +++ VE ++P+ +L
Sbjct: 73 ETELAELRGKVDLVAGGPPCQGFS-MNGLRRPDDP----RSKMVDVYLHYVEIVRPRLIL 127
Query: 474 MENVVDILKFDKASLGRYA---LSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENVV + G Y+ RL Y I+ A +G+PQ R R
Sbjct: 128 LENVVGFRSMKHRTGGTYSDYTKRRLEAFGYDTWIEILRAADWGVPQRRPR 178
>gi|420396777|ref|ZP_14895995.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1313]
gi|393012439|gb|EJB13617.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1313]
Length = 361
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV+ LKP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKALKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|291571391|dbj|BAI93663.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39]
Length = 390
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 7/108 (6%)
Query: 416 KILPLPGD--VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+I L GD +++ICGGPPCQG S N+D +RN + F+ VE LKP Y++
Sbjct: 65 QIRELIGDRHINLICGGPPCQGFSTIGTNNNLD-----KRNFLFLEFLRFVEQLKPDYII 119
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV +L + L+ L ++ Y +++A YG+P+ R R
Sbjct: 120 IENVTGLLSRKNENTLTSILTCLQNIGYTVDVRVLSAHHYGVPEKRRR 167
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 11/69 (15%)
Query: 206 ALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQ-----VRNE 260
+DL+SG GGMS GL + A C +D DKSA ++ + NHP+A+ +R
Sbjct: 8 TFIDLFSGAGGMSCGLEM-AGFECL-----LGVDFDKSAIQTFQNNHPQAETICGDLREI 61
Query: 261 AAEDFLELV 269
+ E EL+
Sbjct: 62 STEQIRELI 70
>gi|409993543|ref|ZP_11276681.1| cytosine-specific DNA methylase [Arthrospira platensis str. Paraca]
gi|79835459|gb|ABB52089.1| Mod [Arthrospira platensis]
gi|409935626|gb|EKN77152.1| cytosine-specific DNA methylase [Arthrospira platensis str. Paraca]
Length = 390
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 7/108 (6%)
Query: 416 KILPLPGD--VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+I L GD +++ICGGPPCQG S N+D +RN + F+ VE LKP Y++
Sbjct: 65 QIRELIGDRHINLICGGPPCQGFSTIGTNNNLD-----KRNFLFLEFLRFVEQLKPDYII 119
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV +L + L+ L ++ Y +++A YG+P+ R R
Sbjct: 120 IENVTGLLSRKNENTLTSILTCLQNIGYTVDVRVLSAHHYGVPEKRRR 167
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
Query: 206 ALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQ-----VRNE 260
+DL+SG GGMS GL + A C +D DKSA ++ + NHP+A+ +R
Sbjct: 8 TFIDLFSGAGGMSCGLEM-AGFECL-----LGVDFDKSAIQTFQNNHPQAETICGDLREI 61
Query: 261 AAEDFLELVKE 271
+ E EL+ +
Sbjct: 62 STEQIRELIGD 72
>gi|440637271|gb|ELR07190.1| hypothetical protein GMDG_02417 [Geomyces destructans 20631-21]
Length = 1233
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 20/120 (16%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
+P GD+D + GGPPCQ SG NR +S +N + F+ V+ +PKY L+ENV
Sbjct: 805 MPKRGDIDFLYGGPPCQDFSGCNRCPKANSI----KNSLLTTFLSFVDHYRPKYFLLENV 860
Query: 478 VDILKFDKASLG----------------RYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L+ S ++ L L + Y A+F ++ A +G PQ R R
Sbjct: 861 RGLLQHRLGSTQKKSGPGVQGGIQQGSVKFILRALTSLGYSAQFHMLQAAEHGAPQSRRR 920
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 204 ELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAE 263
+L +D+++GCGG+S+GL G + T + ++ D A +LK N P +V NE A
Sbjct: 722 KLRAMDVFAGCGGLSSGLHEGGAVE-----TLYGIEWDIDASRTLKRNFPHMKVYNENAN 776
Query: 264 DFLE 267
L+
Sbjct: 777 TLLQ 780
>gi|91069833|gb|ABE10765.1| C-5 cytosine-specific DNA methylase [uncultured Prochlorococcus
marinus clone ASNC1092]
Length = 686
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVD-------SPLDDERNRQIVIFMDIVEFLKPKYVLM 474
G++ +I GGPPCQ S ++R + L+++R F+ IVE +KPK LM
Sbjct: 119 GEISLIAGGPPCQPFSRNIKWRKHNEEVSAQHQELNEDRRELWESFISIVEQVKPKAFLM 178
Query: 475 ENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
ENV DI + + + R ++R Y+ +I A YG+PQ R R
Sbjct: 179 ENVTDIAQTGEQEIYRSIINRAEKAGYRINPKLIYAWQYGVPQLRPR 225
>gi|419418017|ref|ZP_13958382.1| cytosine specific DNA methyltransferase [Helicobacter pylori NCTC
11637 = CCUG 17874]
gi|384374926|gb|EIE30275.1| cytosine specific DNA methyltransferase [Helicobacter pylori NCTC
11637 = CCUG 17874]
Length = 355
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV+ LKP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKALKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|423066558|ref|ZP_17055348.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
gi|406711866|gb|EKD07064.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
Length = 605
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 7/108 (6%)
Query: 416 KILPLPGD--VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+I L GD +++ICGGPPCQG S N+D +RN + F+ VE LKP Y++
Sbjct: 66 QIRELIGDRHINLICGGPPCQGFSTIGSNNNLD-----KRNFLFLEFLRFVEQLKPDYII 120
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV +L + L+ L ++ Y +++A YG+P+ R R
Sbjct: 121 IENVTGLLSRKNENTLTSILTCLQNIGYTVDVRVLSAHHYGVPEKRRR 168
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 11/72 (15%)
Query: 203 AELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQ-----V 257
A+ +DL+SG GGMS GL + A C +D DKSA ++ + NHP+A+ +
Sbjct: 6 AKTTFIDLFSGAGGMSCGLEM-AGFECL-----LGVDFDKSAIQTFQNNHPQAETICGDL 59
Query: 258 RNEAAEDFLELV 269
R + E EL+
Sbjct: 60 REISTEQIRELI 71
>gi|387781756|ref|YP_005792469.1| cytosine-methyltransferase [Helicobacter pylori 51]
gi|261837515|gb|ACX97281.1| cytosine-methyltransferase [Helicobacter pylori 51]
Length = 355
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV+ LKP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKALKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|420412917|ref|ZP_14912042.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|393030678|gb|EJB31756.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
Length = 355
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV+ +KP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKAIKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +I+ K RL + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|419808401|ref|ZP_14333305.1| Type II restriction modification system C5-cytosine and N4-cytosine
or N6-adenine DNAmethyltransferase [Mycoplasma
agalactiae 14628]
gi|390605804|gb|EIN15177.1| Type II restriction modification system C5-cytosine and N4-cytosine
or N6-adenine DNAmethyltransferase [Mycoplasma
agalactiae 14628]
Length = 593
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+++I GGPPCQG S + + LDD RN + ++DIVE + P+ ++ENV +L
Sbjct: 74 INMIIGGPPCQGFSNKGKKKG----LDDPRNFLFLEYLDIVEKVSPELFIIENVKTMLTA 129
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K + ++ M Y+ +G++ A +G+PQ R R
Sbjct: 130 VKGYFIDQIVKKIELMGYKISYGVLNAKDFGIPQSRPR 167
>gi|384899614|ref|YP_005774994.1| cytosine specific DNA methyltransferase [Helicobacter pylori F30]
gi|317179558|dbj|BAJ57346.1| cytosine specific DNA methyltransferase [Helicobacter pylori F30]
Length = 355
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV+ LKP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKALKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|392595567|gb|EIW84890.1| S-adenosyl-L-methionine-dependent methyltransferase [Coniophora
puteana RWD-64-598 SS2]
Length = 1176
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 59/135 (43%), Gaps = 35/135 (25%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
+P PGDV+ I GGPPCQ S N + DD R + + VEF +P++ L+ENV
Sbjct: 756 MPQPGDVNFIYGGPPCQPFSRMNSHKKS----DDIRATLVANMLSYVEFYRPRFFLLENV 811
Query: 478 VDIL----------KFDKASLGRYALSR---------------------LVHMKYQARFG 506
+ +L + D GR R L+ + YQ +F
Sbjct: 812 LGMLGHKLEDQIGREQDNQLKGRLPKERSSDEQEDQSIKFGVVKFITRCLLALGYQIQFK 871
Query: 507 IIAAGCYGLPQFRLR 521
I+ AG YG PQ R R
Sbjct: 872 ILNAGQYGAPQSRRR 886
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 22/235 (9%)
Query: 40 ECHYAQARI--GECIFDLGDCAYIKGEGTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDT 97
E H + +RI G+ ++ + A+ K + IG+++ + ++ VQ + R +D
Sbjct: 511 EEHQSLSRIHPGDFVYLMLSSAFRKFD-----IGQVISIDSSA---KHLTVQMYARFDD- 561
Query: 98 VMKEAADFHDRKRLFYSTVMNDNPVDCIISKVIVAQIPPKIGLKSNSIPSSDFYFDME-- 155
+K A H R+ ++ + + + S I Q S++ +D+ D +
Sbjct: 562 -IKSRASRHGRRPCHERQLVRTSKLKSVSSSTIQGQAYVIYSDSSDAKDVADWILDDDHF 620
Query: 156 YCVEYSTFRTLLTGKIHDLSLPSCTETVPTTATSTFFENMPNHG---PHKAELALLDLYS 212
Y ++S + + LS T TV + E + L L+L+
Sbjct: 621 YVYQFSDSSPVSEDNLETLSKSIFTTTVCSECHDGHLEELRCKADCLKQSGCLQGLELFC 680
Query: 213 GCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLE 267
G GG+ TGL + + T+WA D S+ ++ K NHP+A V N+ LE
Sbjct: 681 GAGGLGTGLEMSGFVE-----TKWAADISPSSAKTFKSNHPDATVYNQCTSLLLE 730
>gi|425788683|ref|YP_007016603.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Aklavik117]
gi|425626998|gb|AFX90466.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Aklavik117]
Length = 355
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV+ LKP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKALKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|420419205|ref|ZP_14918295.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
gi|393031111|gb|EJB32183.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
Length = 355
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV+ +KP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKAIKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +I+ K RL + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|123967970|ref|YP_001008828.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str.
AS9601]
gi|123198080|gb|ABM69721.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str.
AS9601]
Length = 698
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVD-------SPLDDERNRQIVIFMDIVEFLKPKYVLM 474
G++ +I GGPPCQ S ++R + L+++R F+ IVE +KPK LM
Sbjct: 119 GEISLIAGGPPCQPFSRNIKWRKHNEEVSAQHQELNEDRRELWESFISIVEQVKPKAFLM 178
Query: 475 ENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
ENV DI + + + R ++R Y+ +I A YG+PQ R R
Sbjct: 179 ENVTDIAQTGEQEIYRSIINRAEKAGYRINPKLIYAWQYGVPQLRPR 225
>gi|78778763|ref|YP_396875.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT
9312]
gi|78712262|gb|ABB49439.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT
9312]
Length = 686
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVD-------SPLDDERNRQIVIFMDIVEFLKPKYVLM 474
G++ +I GGPPCQ S ++R + L+++R F+ IVE +KPK LM
Sbjct: 119 GEISLIAGGPPCQPFSRNIKWRKHNEEVSAQHQELNEDRRELWESFISIVEQVKPKAFLM 178
Query: 475 ENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
ENV DI + + + R ++R Y+ +I A YG+PQ R R
Sbjct: 179 ENVTDIAQTGEQEIYRSIINRAEKAGYRINPKLIYAWQYGVPQLRPR 225
>gi|157412795|ref|YP_001483661.1| site-specific DNA methylase [Prochlorococcus marinus str. MIT 9215]
gi|157387370|gb|ABV50075.1| Site-specific DNA methylase [Prochlorococcus marinus str. MIT 9215]
Length = 698
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSP-------LDDERNRQIVIFMDIVEFLKPKYVLM 474
G++ +I GGPPCQ S ++R + L+++R F+ IVE +KPK LM
Sbjct: 119 GEISLIAGGPPCQPFSRNIKWRKHNEEVSAQHHELNEDRRELWESFISIVEQVKPKAFLM 178
Query: 475 ENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
ENV DI + + + R ++R Y+ +I A YG+PQ R R
Sbjct: 179 ENVTDIAQTGEQEIYRSIINRAEKAGYRINPKLIYAWQYGVPQLRPR 225
>gi|420420796|ref|ZP_14919880.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4161]
gi|393035595|gb|EJB36639.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4161]
Length = 355
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV+ +KP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKAIKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +I+ K RL + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|425791505|ref|YP_007019422.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Aklavik86]
gi|425629820|gb|AFX90360.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Aklavik86]
Length = 355
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV+ LKP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKALKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|170739771|ref|YP_001768426.1| DNA-cytosine methyltransferase [Methylobacterium sp. 4-46]
gi|168194045|gb|ACA15992.1| DNA-cytosine methyltransferase [Methylobacterium sp. 4-46]
Length = 434
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 8/111 (7%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+++++ L G VD++ GGPPCQG S N R+ D P R+ + +++ V ++P+ VL
Sbjct: 73 RAELVGLRGKVDLLAGGPPCQGFS-TNGLRHPDDP----RSAMVDVYLQYVAAVQPRLVL 127
Query: 474 MENVVDILKFDKASLGRYA---LSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENVV + G Y+ L + YQA ++ A +G+PQ R R
Sbjct: 128 LENVVGFRSMKHRTGGSYSDYVTRELDRLGYQAWSDVLRAADWGVPQRRPR 178
>gi|421717606|ref|ZP_16156908.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
gi|407223113|gb|EKE92906.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
Length = 584
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
++++I GGPPCQG S N+ +N+ L D RN + +++IV+ +KP+ ++ENV +I+
Sbjct: 301 EINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKAIKPEIFIIENVKNIIS 356
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K RL + YQ + I+ A YG+PQ R R
Sbjct: 357 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 395
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
VD++ PPCQG+S N + D + +RN ++ +D+++ +KP++ ++ENV+ K
Sbjct: 86 VDLVVATPPCQGMSVANHKKKND---EIKRNSLVIESIDLIKQIKPRFFILENVLSFYK 141
>gi|256419690|ref|YP_003120343.1| DNA-cytosine methyltransferase [Chitinophaga pinensis DSM 2588]
gi|256034598|gb|ACU58142.1| DNA-cytosine methyltransferase [Chitinophaga pinensis DSM 2588]
Length = 390
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G D+I GGPPCQG S + +D + D+RN Q+ F+ ++ +KPK LMENV I
Sbjct: 75 GKPDIIVGGPPCQGFSFAGK--RLDEYMHDKRNEQVFHFLRFIKEIKPKAFLMENVAGIR 132
Query: 482 ---KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ K L Y + M Y + ++ + Y +PQ R R
Sbjct: 133 VTGQQKKGQLIDYLIEEYEKMGYATSWQVVNSADYRVPQNRKR 175
>gi|24527985|emb|CAD33712.1| putative DNA methylase [Escherichia coli]
Length = 314
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
D DV+ GG PCQG S N RN D DERN+ + F+ +V KPK+ +NV IL
Sbjct: 61 DCDVVIGGFPCQGFSQANLLRNKD----DERNQLYLEFLRVVNAKKPKFFFAQNVRGILS 116
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
D + S + Y+ + + YG+PQ R R
Sbjct: 117 LDNGTAIEKIESDFKSLGYKVKKQLFNVADYGVPQMRYR 155
>gi|392397895|ref|YP_006434496.1| DNA-methyltransferase Dcm [Flexibacter litoralis DSM 6794]
gi|390528973|gb|AFM04703.1| DNA-methyltransferase Dcm [Flexibacter litoralis DSM 6794]
Length = 332
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 423 DVDVICGGPPCQGIS-GYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
++DV+ GGPPCQG S N R +DD RNR F+ IV+ +KPK+ +MENV +
Sbjct: 72 EIDVVIGGPPCQGFSIAGNIGRKF---VDDPRNRLFKEFVRIVKVVKPKFFVMENVARLY 128
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+K + + + Y+ I+ + YG+PQ R R
Sbjct: 129 THNKGATRNEIIKDFEKLGYKVDCKILNSADYGVPQVRKR 168
>gi|428203215|ref|YP_007081804.1| DNA-methyltransferase Dcm [Pleurocapsa sp. PCC 7327]
gi|427980647|gb|AFY78247.1| DNA-methyltransferase Dcm [Pleurocapsa sp. PCC 7327]
Length = 418
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
D+DV+ GGPPCQG S + R VD P RN + F+ +V LKPK+ +MENV +
Sbjct: 79 DIDVVFGGPPCQGFSLIGK-RVVDDP----RNSLVFQFLRVVLELKPKFFVMENVRGLAV 133
Query: 483 FDKASLGRYALSRLVHMKYQAR--FGIIAAGCYGLPQFRLR 521
+ + + YQ + + ++ A CYG+PQ R R
Sbjct: 134 GKQQKILETLIQEFQLQGYQVQKNYQVLNAACYGVPQARER 174
>gi|2894386|emb|CAA74996.1| Bpu10I (5m)cytosine-specific DNA modification methyltransferase
(C1) [Bacillus pumilus]
Length = 398
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 12/104 (11%)
Query: 424 VDVICGGPPCQG--ISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
+D + GGPPCQG IS NR RN D P RN F+ +++ +KP+ V MENV +I+
Sbjct: 73 IDAVIGGPPCQGFSISASNR-RNPDDP----RNYLYRQFLRVIKLVKPRIVFMENVKEIV 127
Query: 482 KFDKASLGRYALSRLV----HMKYQARFGIIAAGCYGLPQFRLR 521
KF + G+ L ++ + Y + II A +G+PQ R+R
Sbjct: 128 KFVLPN-GKLLLDEIIFCLEELGYSIKPFIINAADFGIPQERIR 170
>gi|420461335|ref|ZP_14960126.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
gi|393081851|gb|EJB82569.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-3]
Length = 355
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQAAIKEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 110 KAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|251811836|ref|ZP_04826309.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282875124|ref|ZP_06283997.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
SK135]
gi|417914581|ref|ZP_12558225.1| putative modification methylase HaeIII [Staphylococcus epidermidis
VCU109]
gi|421608173|ref|ZP_16049400.1| DNA-cytosine methyltransferase [Staphylococcus epidermidis AU12-03]
gi|251804633|gb|EES57290.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295889|gb|EFA88410.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
SK135]
gi|341652137|gb|EGS75927.1| putative modification methylase HaeIII [Staphylococcus epidermidis
VCU109]
gi|406656171|gb|EKC82583.1| DNA-cytosine methyltransferase [Staphylococcus epidermidis AU12-03]
Length = 329
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VDVI GGPPCQG S +F + +DD RN+ ++ V LKPK ++ENV ++
Sbjct: 71 VDVIIGGPPCQGFSLAGKFGR--TFIDDPRNQLFKEYLRFVSILKPKIFIIENVARLVSH 128
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+K R + + Y+ ++ I+ Y +PQ R R
Sbjct: 129 NKGKTIREIQESIEKLGYKVKYEILQTSDYNIPQKRQR 166
>gi|210134246|ref|YP_002300685.1| cytosine specific DNA methyltransferase [Helicobacter pylori P12]
gi|210132214|gb|ACJ07205.1| cytosine specific DNA methyltransferase [Helicobacter pylori P12]
Length = 355
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQAAIKEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 110 KAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|189423373|ref|YP_001950550.1| DNA-cytosine methyltransferase [Geobacter lovleyi SZ]
gi|189419632|gb|ACD94030.1| DNA-cytosine methyltransferase [Geobacter lovleyi SZ]
Length = 375
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 401 CPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIF 460
C + IK+ F+ + + CG PCQ + +N +SP DER + F
Sbjct: 66 CDKSIKKLTVLDFQHTLDKYKDSYKLFCGCAPCQPFTK----QNTESPKQDERKDLLTYF 121
Query: 461 MDIVEFLKPKYVLMENVVDILKFDKASLGRY-ALSRLVH-MKYQARFGIIAAGCYGLPQF 518
IV+ +P +V +ENV + K G + A L+H + YQ +G++AA YG PQ
Sbjct: 122 GTIVKECEPDFVFVENVPGLQKVPNHKHGPFPAFEELLHKLNYQIAYGVVAAQDYGAPQL 181
Query: 519 RLR 521
R R
Sbjct: 182 RRR 184
>gi|420443049|ref|ZP_14941978.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-41]
gi|393061454|gb|EJB62319.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-41]
Length = 361
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQTDIKEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 110 KAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|374709818|ref|ZP_09714252.1| site-specific DNA-methyltransferase [Sporolactobacillus inulinus
CASD]
Length = 466
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 22/132 (16%)
Query: 401 CPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIF 460
PERI E+ LP+ +D+I GGP CQ +S + + D R + +
Sbjct: 127 TPERIYEYAN-------LPMGYPIDIIIGGPNCQPMSTAGKRKG----FADIRGEAFIRY 175
Query: 461 MDIVEFLKPKYVLMENVVDILK----FD-------KASLGRYALSRLVHMKYQARFGIIA 509
+D++E ++PKY ++ENV +L FD K + Y L+R M Y F +
Sbjct: 176 IDVIEEIRPKYFILENVRGLLSVEAIFDDTNDKPVKGGVLHYTLNRFEKMGYAVSFQLYN 235
Query: 510 AGCYGLPQFRLR 521
A +G PQ R R
Sbjct: 236 AANFGAPQGRER 247
>gi|452204612|ref|YP_007484741.1| DNA (cytosine-5-)-methyltransferase [Dehalococcoides mccartyi
BTF08]
gi|452111668|gb|AGG07399.1| DNA (cytosine-5-)-methyltransferase [Dehalococcoides mccartyi
BTF08]
Length = 363
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
GD+D++ G PPCQG + R N ++D RN ++ F V+ L+PK V+MENV ++
Sbjct: 85 GDLDLVAGCPPCQGFTSL-RTLNGSKEVEDPRNDLVLEFQRFVKHLRPKAVMMENVPELA 143
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + + L RL Y ++ I+ AG YG+PQ R R
Sbjct: 144 EDKRFADFKAYLKRL---GYVGQYRILDAGNYGVPQRRER 180
>gi|420490054|ref|ZP_14988640.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-13]
gi|420523894|ref|ZP_15022304.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-13b]
gi|393109397|gb|EJC09928.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-13]
gi|393133053|gb|EJC33470.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-13b]
Length = 361
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQTEIKEKVIELAKKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 110 KAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|421735907|ref|ZP_16174779.1| hypothetical protein B217_02580 [Bifidobacterium bifidum IPLA
20015]
gi|407296797|gb|EKF16307.1| hypothetical protein B217_02580 [Bifidobacterium bifidum IPLA
20015]
Length = 398
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPL---DDERNRQIVIFMDIVEFLKPKYVLMENVV 478
G +D++ GGPPCQG S +++P+ +D RN ++ V+ +P+ +L+ENV
Sbjct: 77 GQLDLVAGGPPCQGFS-------INAPVRSNEDPRNHLFREYLRYVDAFQPRAILIENVP 129
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ F+ L L + Y A I+ A YG+PQ R R
Sbjct: 130 GLVSFEHGGTLHAILDALADLGYGADVHILGAPYYGVPQMRWR 172
>gi|420486671|ref|ZP_14985279.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|420520558|ref|ZP_15018989.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
gi|393104224|gb|EJC04781.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|393127145|gb|EJC27590.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-8b]
Length = 361
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQTDIKEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 110 KAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|192292294|ref|YP_001992899.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris TIE-1]
gi|192286043|gb|ACF02424.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris TIE-1]
Length = 500
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 74/168 (44%), Gaps = 18/168 (10%)
Query: 360 IVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILP 419
IV DP+ + GLNF ++ S EP + P + + + G S
Sbjct: 43 IVAAVEHDPDAAKSHGLNF------HAGSPVHMEPRDISSTPPANLTKALGLGHHSLAF- 95
Query: 420 LPGDVDVICGGPPCQGIS--GYNRFRNV-DSP---LDDERNRQIVIFMDIVEFLKPKYVL 473
DV+ GGPPCQ + G ++ R V D P D R R + ++D VE P VL
Sbjct: 96 -----DVVIGGPPCQAFARVGRSKLREVADHPEAFRHDPRARLYIEYLDYVEECAPLAVL 150
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
MENV D+L ++ L Y+ + ++ A YG+PQ R R
Sbjct: 151 MENVPDVLNHGGHNIAEEISEVLESRGYRCGYTLLNAARYGVPQMRER 198
>gi|395332104|gb|EJF64483.1| S-adenosyl-L-methionine-dependent methyltransferase [Dichomitus
squalens LYAD-421 SS1]
Length = 1249
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 19/118 (16%)
Query: 419 PLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVV 478
P PGD+D I G PCQ S N F+ +D ++ ++ + +++L+PKY + ENV
Sbjct: 860 PKPGDIDCIVAGFPCQPHSTLNMFQKA----NDRKSHLLLNLLSWIDYLQPKYCVFENVR 915
Query: 479 DILKF--DKASLGRYAL-------------SRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L + + + GR+ + L+ + YQ F ++ AG YG PQ R+R
Sbjct: 916 GFLNYNLNASQAGRFRMVGGIKMGGLKFFIHALLTLGYQVHFSLLQAGQYGTPQRRVR 973
>gi|420424632|ref|ZP_14923696.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-5]
gi|393043219|gb|EJB44223.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-5]
Length = 361
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQTDIKEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 110 KAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|387907427|ref|YP_006337761.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
XZ274]
gi|387572362|gb|AFJ81070.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
XZ274]
Length = 355
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPGD--VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L +++I GGPPCQG S N+ +N+ L D RN + +++IV+ LKP+
Sbjct: 60 IKEKVIKLAQTLGINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKALKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQVSYQILNAKDYGVPQNRER 166
>gi|396578258|gb|AFM52076.2| DNA methyltransferase [Mycoplasma bovis HB0801]
Length = 594
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+++I GGPPCQG S + LDD RN + ++DIVE + P+ ++ENV +L
Sbjct: 75 INMIIGGPPCQGFSNKGK----KQGLDDPRNFLFLEYLDIVEKVSPELFIIENVKTMLIA 130
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K + ++ M Y+ +G++ A +G+PQ R R
Sbjct: 131 VKGYFIDQIVEKIEMMGYKISYGVLNAKDFGVPQNRAR 168
>gi|420429703|ref|ZP_14928733.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
gi|393048322|gb|EJB49289.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-20]
Length = 361
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQTDIKEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 110 KAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|347836057|emb|CCD50629.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1459
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 408 FVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDI-VEF 466
FV N KI PLPGDVDVI G PCQG S N + D L RN+ ++ + ++F
Sbjct: 764 FVGNPQSLKI-PLPGDVDVIMAGSPCQGFSRMNSNKGNDQSL---RNQSLIASVAAYIDF 819
Query: 467 LKPKYVLMENVVDI----LKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+PKY L+ENV+++ L+ D+ L + + +V + YQ + ++ + +G Q R R
Sbjct: 820 YRPKYGLLENVLNMAQKGLRRDEDVLSQL-ICTIVGLGYQVQLFLLDSWSFGSSQSRSR 877
>gi|413915570|emb|CCM44166.1| DNA-cytosine methyltransferase [Staphylococcus xylosus]
Length = 348
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 18/170 (10%)
Query: 359 RIVDICYGDPNESGKRGLNFKVHWKGYST--SEDSW-EPIEGL-RNCPERIKEFVR-NGF 413
+I+DI SG GL+ +G+ T + D W + IE +N ++ + + F
Sbjct: 2 KIIDIF------SGAGGLSLGFESEGFETILAIDKWTDAIETFNKNHENKVGTTIDIHDF 55
Query: 414 KSKILPL--PGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKY 471
++ L G +D I GGPPCQG S R+ + P RN + ++ V +KPK+
Sbjct: 56 SNEYLEQYKDGSIDGIIGGPPCQGFSLVGT-RDTNDP----RNSLYIEYVRFVSVIKPKF 110
Query: 472 VLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +L +K + R + Y + ++ A YG+PQ R R
Sbjct: 111 FVLENVSGLLSLEKGKFKDDIIKRFEGLGYNVDYKLLTASDYGVPQSRKR 160
>gi|339321213|ref|YP_004683735.1| adenine-specific DNA-methyltransferase [Mycoplasma bovis Hubei-1]
gi|392430292|ref|YP_006471337.1| DNA methyltransferase [Mycoplasma bovis HB0801]
gi|338227338|gb|AEI90400.1| adenine-specific DNA-methyltransferase [Mycoplasma bovis Hubei-1]
Length = 593
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+++I GGPPCQG S + + LDD RN + ++DIVE + P+ ++ENV +L
Sbjct: 74 INMIIGGPPCQGFSNKGKKQG----LDDPRNFLFLEYLDIVEKVSPELFIIENVKTMLIA 129
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K + ++ M Y+ +G++ A +G+PQ R R
Sbjct: 130 VKGYFIDQIVEKIEMMGYKISYGVLNAKDFGVPQNRAR 167
>gi|376001427|ref|ZP_09779297.1| DNA (cytosine-5-)-methyltransferase [Arthrospira sp. PCC 8005]
gi|375330256|emb|CCE15050.1| DNA (cytosine-5-)-methyltransferase [Arthrospira sp. PCC 8005]
Length = 387
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 7/108 (6%)
Query: 416 KILPLPGD--VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+I L GD +++ICGGPPCQG S N+D +RN + F+ VE L+P Y++
Sbjct: 66 QIRELIGDRHINLICGGPPCQGFSTIGSNNNLD-----KRNFLFLEFLRFVEQLQPDYII 120
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV +L + L+ L ++ Y +++A YG+P+ R R
Sbjct: 121 IENVTGLLSRKNENTLTSILTCLQNIGYTVDVRVLSAHHYGVPEKRRR 168
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 11/72 (15%)
Query: 203 AELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQ-----V 257
A+ +DL+SG GGMS GL + A C +D DKSA ++ + NHP+A+ +
Sbjct: 6 AKTTFIDLFSGAGGMSCGLEM-AGFECL-----LGVDFDKSAIQTFQNNHPQAETICGDL 59
Query: 258 RNEAAEDFLELV 269
R + E EL+
Sbjct: 60 REISTEQIRELI 71
>gi|325679553|ref|ZP_08159133.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8]
gi|324108840|gb|EGC03076.1| DNA (cytosine-5-)-methyltransferase [Ruminococcus albus 8]
Length = 708
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 414 KSKILPLPGD--VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKY 471
K +I+ L + V+++ GGPPCQG S + L+D RN + +++IV + P+
Sbjct: 407 KERIISLSKEKKVNMVIGGPPCQGFS----LKGKKLGLNDPRNFLFLEYLNIVSEINPQV 462
Query: 472 VLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +L + R+ M Y R+G++ + YG+PQ R R
Sbjct: 463 FIIENVKALLSTSAGWFKDQIVQRVEEMGYTVRYGVLNSADYGVPQLRQR 512
>gi|316934943|ref|YP_004109925.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris DX-1]
gi|315602657|gb|ADU45192.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris DX-1]
Length = 495
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 6/103 (5%)
Query: 425 DVICGGPPCQGIS--GYNRFRNV-DSPLD---DERNRQIVIFMDIVEFLKPKYVLMENVV 478
D+I GGPPCQ + G + R V + P D R + ++ VE L+P +LMENV
Sbjct: 103 DLIVGGPPCQAYARVGRAKLREVAEHPQAFKIDPRANLYLRYLHYVERLQPIALLMENVP 162
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
DIL + ++G+ + L M Y+AR+ ++ + +G+PQ R R
Sbjct: 163 DILNYGGHNIGQEIVEALDAMGYEARYSLLNSAHHGVPQMRDR 205
>gi|420463026|ref|ZP_14961804.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-4]
gi|393080554|gb|EJB81279.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-4]
Length = 361
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQTEIKEKVIELAKKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 110 KAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|270307689|ref|YP_003329747.1| DNA-cytosine methyltransferase [Dehalococcoides sp. VS]
gi|270153581|gb|ACZ61419.1| DNA-cytosine methyltransferase [Dehalococcoides sp. VS]
Length = 365
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G++D++ G PPCQG + R N ++D RN ++ F V++L+PK V+MENV ++
Sbjct: 85 GELDLVAGCPPCQGFTSL-RTLNGSKEVEDPRNDLVLEFQRFVKYLRPKAVMMENVPELA 143
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + + L RL Y ++ I+ AG YG+PQ R R
Sbjct: 144 EDKRFTDFKAYLKRL---GYVGQYRILDAGNYGVPQRRER 180
>gi|420480059|ref|ZP_14978703.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1]
gi|420510504|ref|ZP_15008994.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1b]
gi|393097972|gb|EJB98564.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1]
gi|393122245|gb|EJC22722.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-1b]
Length = 361
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQTEIKEKVIELAKKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 110 KAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|449106429|ref|ZP_21743095.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola ASLM]
gi|449117489|ref|ZP_21753906.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola H-22]
gi|451968138|ref|ZP_21921367.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola US-Trep]
gi|448950690|gb|EMB31511.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola H-22]
gi|448964942|gb|EMB45608.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola ASLM]
gi|451703095|gb|EMD57477.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola US-Trep]
Length = 413
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 13/131 (9%)
Query: 398 LRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQI 457
L P I E ++N +K+++ G +D++ GGPPCQG S + +D RN +
Sbjct: 61 LPQTPHDINEILKN-YKNQLNEFRGKIDLVVGGPPCQGFSTAGK-----RVKEDVRNNLV 114
Query: 458 VIFMDIVEFLKPKYVLMENVVDIL-----KFDKASL--GRYALSRLVHMKYQARFGIIAA 510
+++ ++ ++PK +L ENV K D+AS+ + + L+ + Y+ II
Sbjct: 115 FSYIEFIKLIEPKMILFENVKGFTYAFEKKIDEASIPYSKKVIDALIDLNYKIEAYIIDF 174
Query: 511 GCYGLPQFRLR 521
YG+PQ R R
Sbjct: 175 SEYGIPQRRNR 185
>gi|448494453|ref|ZP_21609440.1| DNA-cytosine methyltransferase [Halorubrum californiensis DSM
19288]
gi|445689288|gb|ELZ41528.1| DNA-cytosine methyltransferase [Halorubrum californiensis DSM
19288]
Length = 389
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 77/178 (43%), Gaps = 37/178 (20%)
Query: 371 SGKRGLNFKVHWKGYSTS--EDSWEPIEGLRNCPERIKEFVRNGFKSKIL---------P 419
SG GL+ G+ + D WEP K + RN +++L P
Sbjct: 26 SGCGGLDLGFERAGFDVALGSDQWEPA---------AKTYRRNFADTEVLEGDVRELDAP 76
Query: 420 L-----------PGDVDVICGGPPCQGISGYNRFR-NVDSPLDDERNRQIVIFMDIVEFL 467
P VDV+ GGPPCQG S N + +D D RN F+ +V L
Sbjct: 77 TIREAVAGAGYDPDGVDVVIGGPPCQGFSRLNNEQIELDEMEKDRRNTLFEEFLRVVSVL 136
Query: 468 KPKYVLMENVVDILKFDKASLGRYALSRLVH----MKYQARFGIIAAGCYGLPQFRLR 521
+P+ VLMENV D++ + S RY +V Y+ + ++ A YG+PQ R R
Sbjct: 137 EPQLVLMENVRDLINR-QTSDDRYVKDLIVDEFAAHGYKCEYRVLEAEQYGVPQKRRR 193
>gi|420448068|ref|ZP_14946952.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-44]
gi|393066881|gb|EJB67699.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-44]
Length = 355
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQTDIKEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 110 KAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|108562472|ref|YP_626788.1| cytosine specific DNA methyltransferase [Helicobacter pylori HPAG1]
gi|107836245|gb|ABF84114.1| cytosine specific DNA methyltransferase [Helicobacter pylori HPAG1]
Length = 355
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQTEIKEKVIKLAKKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 110 KAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|17225496|gb|AAL37432.1|AF328909_1 putative cytosine-specific DNA methyltransferase [Helicobacter
pylori]
gi|17225522|gb|AAL37451.1|AF328916_1 cytosine-specific DNA methyltransferase [Helicobacter pylori]
Length = 361
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQTEIKEKVIELAKKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 110 KAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|420501970|ref|ZP_15000511.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-41]
gi|393153250|gb|EJC53543.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-41]
Length = 355
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQTEIKEKVIELAKKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 110 KAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|17225517|gb|AAL37447.1|AF328915_1 cytosine-specific DNA methyltransferase [Helicobacter pylori]
Length = 361
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV+ +KP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKAIKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|15644682|ref|NP_206852.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
26695]
gi|410023283|ref|YP_006892536.1| cytosine specific DNA methyltransferase [Helicobacter pylori Rif1]
gi|410501052|ref|YP_006935579.1| cytosine specific DNA methyltransferase [Helicobacter pylori Rif2]
gi|410681569|ref|YP_006933971.1| cytosine specific DNA methyltransferase [Helicobacter pylori 26695]
gi|419416152|ref|ZP_13956734.1| cytosine specific DNA methyltransferase [Helicobacter pylori P79]
gi|2313124|gb|AAD07117.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
26695]
gi|384375626|gb|EIE30896.1| cytosine specific DNA methyltransferase [Helicobacter pylori P79]
gi|409893210|gb|AFV41268.1| cytosine specific DNA methyltransferase [Helicobacter pylori 26695]
gi|409894940|gb|AFV42862.1| cytosine specific DNA methyltransferase [Helicobacter pylori Rif1]
gi|409896603|gb|AFV44457.1| cytosine specific DNA methyltransferase [Helicobacter pylori Rif2]
Length = 355
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQTEIKEKVIKLAKKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 110 KAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|420408038|ref|ZP_14907197.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4216]
gi|393025523|gb|EJB26629.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4216]
Length = 355
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV+ +KP+
Sbjct: 60 IKEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKAIKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|420451207|ref|ZP_14950061.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
gi|393065139|gb|EJB65969.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-45]
Length = 355
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV+ +KP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKAIKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|384887098|ref|YP_005761609.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
52]
gi|261838928|gb|ACX98693.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
52]
Length = 355
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQTEIKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 110 KAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|379754157|ref|YP_005342829.1| DNA-cytosine methyltransferase [Mycobacterium intracellulare
MOTT-02]
gi|378804373|gb|AFC48508.1| DNA-cytosine methyltransferase [Mycobacterium intracellulare
MOTT-02]
Length = 669
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 422 GDVDVICGGPPCQGIS--GYNRFR-NVDSPL---DDERNRQIVIFMDIVEFLKPKYVLME 475
+VD++ GGPPCQ S G + R V S L DER F++IV+ +PK VLME
Sbjct: 118 AEVDLVAGGPPCQPFSRAGRSMIRYRVQSGLRDPHDERRDLWRSFLEIVDRARPKAVLME 177
Query: 476 NVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
NV D+ + + R + L M Y +I A YG+PQFR R
Sbjct: 178 NVPDMALDREMFILRSMVEELEQMNYSVEERVIDAWRYGVPQFRQR 223
>gi|311221492|gb|ADP76553.1| DNA methyltransferase [Helicobacter pylori]
Length = 587
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQTEIKEKVIKLAKKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 110 KAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|228474527|ref|ZP_04059258.1| site-specific DNA methylase [Staphylococcus hominis SK119]
gi|228271190|gb|EEK12558.1| site-specific DNA methylase [Staphylococcus hominis SK119]
Length = 414
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP ++D++ GG PCQG S N RN + D+RN + + ++E KPK+ + ENV
Sbjct: 63 LPNEEEIDLVIGGFPCQGFSVNNIKRN----MKDKRNFLYLELLKVIELKKPKFFVAENV 118
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L +K + + ++ Y+ + ++ A YG+PQ R R
Sbjct: 119 KGLLSMEKGKVIDMIVKDFENLGYEVDYQLLNAADYGVPQARER 162
>gi|284046510|ref|YP_003396850.1| DNA-cytosine methyltransferase [Conexibacter woesei DSM 14684]
gi|283950731|gb|ADB53475.1| DNA-cytosine methyltransferase [Conexibacter woesei DSM 14684]
Length = 424
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
D+D++ GGPPCQ Y++ RN D +DD RNR F+ +++ ++P+ +++ENV+ + +
Sbjct: 75 DLDLLAGGPPCQA---YSQVRNHDRLIDDPRNRLYREFVGLLQEIRPRTLVLENVLGMSQ 131
Query: 483 FDKASLGRYALSRL-VHMKYQARFGIIAAGCYGLPQFRLR 521
++ R L + Y G++ AG +G PQ R R
Sbjct: 132 LKGGAVRRQIEQDLSLQGAYDVISGVLDAGDFGTPQRRPR 171
>gi|420461148|ref|ZP_14959943.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-27]
gi|393074722|gb|EJB75481.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-27]
Length = 355
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV+ +KP+
Sbjct: 60 IKEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKAIKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|341868931|gb|AEK98589.1| domain rearranged methyltransferase 1 [Vitis amurensis]
Length = 137
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP PG VD I GGPPCQG SG NRF + I+ F+ ++ +P++ L+ENV
Sbjct: 60 LPRPGQVDFINGGPPCQGFSGMNRFNQ--GKWSKMQCEMILAFLSFADYFRPRFFLLENV 117
Query: 478 VDILKFDKASLGRYALSRLV 497
+ + F+K R + L+
Sbjct: 118 RNFVTFNKGQTFRLTPASLL 137
>gi|420426239|ref|ZP_14925295.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-9]
gi|393044959|gb|EJB45949.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-9]
Length = 355
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV+ +KP+
Sbjct: 60 IKEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKAIKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|347726868|gb|AEP19812.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
++++I GGPPCQG S N+ +N+ L D RN + +++IV LKP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVRALKPEIFIIENVKNLIS 127
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K RL + YQ + I+ A YG+PQ R R
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|421716108|ref|ZP_16155420.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R037c]
gi|407222006|gb|EKE91809.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R037c]
Length = 355
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV+ +KP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKAIKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|403511953|ref|YP_006643591.1| DNA (cytosine-5-)-methyltransferase family protein [Nocardiopsis
alba ATCC BAA-2165]
gi|402800522|gb|AFR07932.1| DNA (cytosine-5-)-methyltransferase family protein [Nocardiopsis
alba ATCC BAA-2165]
Length = 413
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VDVI GGPPCQG S N+ RN+ L+DERN ++ +V L+PK ++ENV L
Sbjct: 82 VDVILGGPPCQGFSLLNK-RNLIKDLNDERNVLWREYVRVVRALRPKVFVIENVGRFLDS 140
Query: 484 DKASLGRYALSR---LVHMKYQARFGIIAAGCYGLPQFRLR 521
D+ SL R R L+ A ++ A YG+PQ R R
Sbjct: 141 DEFSLLRGETERPDGLLREYELAEARVLNAADYGVPQTRRR 181
>gi|313677760|ref|YP_004055756.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
gi|312944458|gb|ADR23648.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
Length = 346
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
+VD+I GGPPCQG S + +DDERN+ F+ V++ KPK +MENV +IL
Sbjct: 72 NVDLIVGGPPCQGFSIAGK-----RIIDDERNQLYKSFLRFVDYFKPKGFVMENVPNILS 126
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ L + Y+ + + A + +PQ R R
Sbjct: 127 MGNGAVKSQILKDFKDIGYKINYNKLLASDFAVPQNRRR 165
>gi|341819908|emb|CCC56122.1| DNA (cytosine-5-)-methyltransferase [Weissella thailandensis
fsh4-2]
Length = 357
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 68/120 (56%), Gaps = 12/120 (10%)
Query: 403 ERIKE-FVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFM 461
E++K+ V+N ++K V++I GGPPCQG S N+ + + LDD RN + ++
Sbjct: 58 EKVKQAIVKNAVETK-------VNMIIGGPPCQGFS--NKGKKLG--LDDPRNFLFLEYL 106
Query: 462 DIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++V L+P+ ++ENV +L + + R+ + Y+ + I++A YG+PQ R R
Sbjct: 107 EMVNRLQPEVFVIENVKAMLTAVNGYFIKEIVDRINALGYKVNYSILSASNYGVPQNRQR 166
>gi|113474395|ref|YP_720456.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
gi|110165443|gb|ABG49983.1| DNA-cytosine methyltransferase [Trichodesmium erythraeum IMS101]
Length = 421
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 405 IKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ E N + K+ ++DVI GGPPCQG S + LDD RN I F+ IV
Sbjct: 55 VVELTGNEIREKLNIPNREIDVIFGGPPCQGFSQIGK-----RALDDPRNALISHFLRIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQAR--FGIIAAGCYGLPQFRLR 521
LKPKY ++ENV + +++L YQ + + ++ A YG+PQ R R
Sbjct: 110 LELKPKYFVIENVKGLTVGKHQIFLEEVINKLSKNSYQLQLPYQVLNAANYGVPQHRER 168
>gi|384893666|ref|YP_005767715.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Sat464]
gi|308062920|gb|ADO04807.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Sat464]
Length = 355
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV+ +KP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKAIKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|444301299|gb|AGD98765.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 354
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV+ LKP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKALKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+++NV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIKNVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQSRER 166
>gi|389748984|gb|EIM90161.1| S-adenosyl-L-methionine-dependent methyltransferase [Stereum
hirsutum FP-91666 SS1]
Length = 1151
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 19/114 (16%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
D+DVI G PCQ S N F+ + D ++ I++ + V+ KPKY L ENV L+
Sbjct: 758 DIDVILAGFPCQPHSRLNMFQKAN----DSKSNLILVLLSYVDLFKPKYCLFENVRGFLQ 813
Query: 483 F-------DKASLG--------RYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
F D+ S+ ++ ++ M YQ R ++ G YGLPQ R+R
Sbjct: 814 FNLNATQKDQYSVEGGIDMGGIKFLQYAMLTMDYQVRIMLLQGGHYGLPQTRIR 867
>gi|313667096|gb|ADR72993.1| M1.BspMI [Bacillus sp. M(2010)]
Length = 348
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLD-----DERNRQIVIFMDIVEFLKPKYVLMENV 477
+VDV+ GGPPCQG S + V S L+ D RN I ++ +++ LKPKY++MENV
Sbjct: 70 EVDVLIGGPPCQGFSTIGK--RVSSNLEKRSSPDPRNGLIFQYIRLLKDLKPKYLVMENV 127
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L + A++ + + Y + ++ YG+PQ R R
Sbjct: 128 KGLLTMNGGGDLANAINLIQELGYNVAYKVLNMADYGVPQIRER 171
>gi|419648632|ref|ZP_14179966.1| type II DNA modification methyltransferase [Campylobacter jejuni
subsp. jejuni LMG 9217]
gi|380626143|gb|EIB44638.1| type II DNA modification methyltransferase [Campylobacter jejuni
subsp. jejuni LMG 9217]
Length = 356
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G +D++ GGPPCQ S + + DER ++ +++ L+PK + ENV+ +L
Sbjct: 65 GKIDLLLGGPPCQSYSTLGKRKM------DERANLFQEYLRVLKILQPKIFIFENVIGLL 118
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K L +Y + + Y + I+ A YG+PQ R R
Sbjct: 119 SMQKGELFKYICCQFKKINYVVDYSILNAAFYGVPQIRER 158
>gi|308183851|ref|YP_003927984.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SJM180]
gi|308059771|gb|ADO01667.1| cytosine specific DNA methyltransferase [Helicobacter pylori
SJM180]
Length = 355
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + ++++V+ +KP+
Sbjct: 60 IKEKVIELAKKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEVVKAIKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNLISCTKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|386745575|ref|YP_006218792.1| cytosine specific DNA methyltransferase [Helicobacter pylori
HUP-B14]
gi|384551824|gb|AFI06772.1| cytosine specific DNA methyltransferase [Helicobacter pylori
HUP-B14]
Length = 650
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 6/110 (5%)
Query: 414 KSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKY 471
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV+ +KP+
Sbjct: 356 KEKVIELAKKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKAIKPEI 411
Query: 472 VLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 412 FIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 461
>gi|284159927|ref|YP_001060514.2| BsaWI methylase [Burkholderia pseudomallei 668]
gi|283775103|gb|ABN83996.2| BsaWI methylase [Burkholderia pseudomallei 668]
Length = 440
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 13/116 (11%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ ++ L G VD+I GGPPCQG S R DERN+ + +++VE ++P+ VL
Sbjct: 78 RRQLRALSGTVDLIVGGPPCQGFSVGGRRDGA-----DERNKLVFKMLELVELVRPRAVL 132
Query: 474 MENVVDILK--------FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV I + A + + + Y + +++A +G+PQ R R
Sbjct: 133 IENVEGIARRFVAKPGHSQSAPVAELVIQEFERLGYVGTYTVVSAVDFGVPQTRRR 188
>gi|217032842|ref|ZP_03438321.1| hypothetical protein HPB128_165g1 [Helicobacter pylori B128]
gi|298737011|ref|YP_003729541.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
gi|216945425|gb|EEC24089.1| hypothetical protein HPB128_165g1 [Helicobacter pylori B128]
gi|298356205|emb|CBI67077.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
Length = 361
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPGD--VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L +++I GGPPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQAAIKEKVIKLAQTLGINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 110 KAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|345867871|ref|ZP_08819872.1| DNA-cytosine methyltransferase family protein [Bizionia
argentinensis JUB59]
gi|344047793|gb|EGV43416.1| DNA-cytosine methyltransferase family protein [Bizionia
argentinensis JUB59]
Length = 387
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 75/169 (44%), Gaps = 29/169 (17%)
Query: 371 SGKRGLNFKVHWKGYST--SEDSWEPIE-----GLRNCPERIKEFVRNGF--------KS 415
SG GL W G++T + D E E N P F+RN KS
Sbjct: 8 SGCGGLALGFKWAGFNTLLASDVDENCEKTYTHNFPNVP-----FIRNDLRDISTAEIKS 62
Query: 416 KILPLPGDVDVICGGPPCQGISGYNRFRN-VDSPLDDERNRQIVIFMDIVEFLKPKYVLM 474
I P DV+ GGPPCQG S N+ RN V S D RN F+ +V L+PK +M
Sbjct: 63 IISRTP---DVVIGGPPCQGFSLANKNRNKVKS---DPRNELFYEFVRVVTDLQPKAFVM 116
Query: 475 ENVVDILKFDKASLGRYALSRL--VHMKYQARFGIIAAGCYGLPQFRLR 521
ENV +L K + + + YQ + ++ A YG+PQ R R
Sbjct: 117 ENVRGLLSMQKGEVIKLMKEEFENAGIGYQVDYKVLLASDYGVPQNRHR 165
>gi|357390490|ref|YP_004905331.1| putative DNA methyltransferase [Kitasatospora setae KM-6054]
gi|311896967|dbj|BAJ29375.1| putative DNA methyltransferase [Kitasatospora setae KM-6054]
Length = 676
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
Query: 419 PLPGDVDVICGGPPCQGIS--GYNRFRNV-----DSPLDDERNRQIVIFMDIVEFLKPKY 471
P G +D++ GGPPCQ S G ++ R++ +P+D R ++ I+E +KP+
Sbjct: 119 PAAGRIDLVAGGPPCQPFSRAGRSKIRDLVENHGRNPVD-LRKELWRSYLRIIEVVKPRA 177
Query: 472 VLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
VLMENV D+ D + R+ RL + Y + ++ A YG+PQ R R
Sbjct: 178 VLMENVPDMGLSDDFRVVRFIEQRLENAGYATQVRLVDAWRYGVPQHRKR 227
>gi|420416221|ref|ZP_14915332.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
gi|393037667|gb|EJB38702.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
Length = 361
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L ++++I GGPPCQG S N+ +N+ L D RN + ++++V
Sbjct: 54 DITQTEIKEKVIELAKKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEVV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 110 KAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|413915569|emb|CCM44165.1| DNA-cytosine methyltransferase [Staphylococcus xylosus]
Length = 359
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+DVI GGPPCQG S NR+ + DD RN+ ++ V ++PK ++ENV IL
Sbjct: 69 IDVIIGGPPCQGFSSANRYLKDE---DDPRNKLFYEYLRFVNIIRPKAFIIENVPGILTR 125
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
D L Y ++++ YG+P+ R R
Sbjct: 126 DNGYAKEKILELTESYDYNVEVKVLSSENYGVPEIRKR 163
>gi|418028739|ref|ZP_12667291.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354691422|gb|EHE91350.1| DNA (cytosine-5-)-methyltransferase [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 498
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 18/125 (14%)
Query: 397 GLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQ 456
G+ N IK++V +VD++ GGPPCQG S NR R +D P RN+
Sbjct: 173 GIENISSHIKDYVNE-----------EVDMVAGGPPCQGFSEANRQRLIDDP----RNKL 217
Query: 457 IVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLP 516
+++ V L+PK +MENV +LK L + S Y + I+ A +G+P
Sbjct: 218 YKYYVESVTALQPKVFVMENVKGMLKVAGQVLEDFNNS---ASHYDIYYKILNARNFGVP 274
Query: 517 QFRLR 521
Q R R
Sbjct: 275 QNRER 279
>gi|444301295|gb|AGD98763.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
++++I GGPPCQG S N+ +N+ L D RN + +++IV LKP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVRALKPEIFIIENVKNLIS 127
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K RL + YQ + I+ A YG+PQ R R
Sbjct: 128 CAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQDRER 166
>gi|156936516|ref|YP_001440431.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC
BAA-894]
gi|156534770|gb|ABU79595.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC
BAA-894]
Length = 415
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSP---LDDERNRQIVIFMDIVEFLKPKYVLMENVV 478
G++D+I GGPPCQG S +++P +D RN ++ V +P+ VL+ENV
Sbjct: 84 GELDLIAGGPPCQGFS-------INAPKRSTEDSRNHLFREYLRFVSEFQPRAVLIENVP 136
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ F+ + L L ++ Y+A I+ A YG+PQ R R
Sbjct: 137 GMVSFEGGATLDAILESLKNLGYEADVRILYAPHYGIPQTRWR 179
>gi|374988544|ref|YP_004964039.1| DNA-cytosine methyltransferase [Streptomyces bingchenggensis BCW-1]
gi|297159196|gb|ADI08908.1| DNA-cytosine methyltransferase [Streptomyces bingchenggensis BCW-1]
Length = 664
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 410 RNGFKSKILPLPGDVDVICGGPPCQGIS--GYNRFRNV----DSPLDDERNRQIVIFMDI 463
R+ + + P G +D++ GGPPCQ S G ++ R++ D R ++D+
Sbjct: 98 RDRLEQVLEPAKGKIDLVAGGPPCQPFSRAGRSKIRSLVEHHGRDAHDLRKELWSAYLDV 157
Query: 464 VEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
V+ +KP+ VLMENV D+ D + R +L + Y + ++ A YG+PQ R R
Sbjct: 158 VKRIKPRAVLMENVPDMGLGDDFFVVRVIEQQLEELGYATQVRLVDAWRYGVPQHRKR 215
>gi|86142380|ref|ZP_01060890.1| putative 5-methylcytosine methyltransferase [Leeuwenhoekiella
blandensis MED217]
gi|85831132|gb|EAQ49589.1| putative 5-methylcytosine methyltransferase [Leeuwenhoekiella
blandensis MED217]
Length = 332
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 423 DVDVICGGPPCQGIS-GYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
++DV+ GGPPCQG S N R +DD RN+ F+ +V+ ++P Y +MENV +
Sbjct: 72 EIDVVIGGPPCQGFSIAGNIGRKF---IDDPRNKLFKEFVRVVKVVEPTYFVMENVARLY 128
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+K + + ++ ++ Y+ I+ + YG+PQ R R
Sbjct: 129 NHNKGNTRKEIINDFENLGYKVECKILNSADYGVPQVRKR 168
>gi|421711053|ref|ZP_16150397.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
gi|407213258|gb|EKE83116.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
Length = 355
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPGD--VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L +++I GGPPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQTDIKEKVIELAKKLGINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 110 KAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|226186551|dbj|BAH34655.1| putative modification methylase [Rhodococcus erythropolis PR4]
Length = 444
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
D+DV+ GGPPCQG S R DD RN + + E +KPK ++MENV +L
Sbjct: 171 DIDVLAGGPPCQGFSLAGRRDR-----DDPRNHLFRNLLQLAELVKPKVLVMENVRLLLS 225
Query: 483 FDKASLGRYA---LSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
G L + Y A + A YG+PQFR R
Sbjct: 226 MKDPDGGMVVDRILGEMAACGYDASVNTVNAQDYGVPQFRER 267
>gi|123965679|ref|YP_001010760.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT
9515]
gi|123200045|gb|ABM71653.1| DNA-cytosine methyltransferase [Prochlorococcus marinus str. MIT
9515]
Length = 689
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVD-------SPLDDERNRQIVIFMDIVEFLKPKYVLM 474
G++ +I GGPPCQ S ++R + L+++R F+ IVE +KPK LM
Sbjct: 119 GEISLIAGGPPCQPFSRNIKWRKHNEEVSAQHQELNEDRRELWESFISIVEQVKPKAFLM 178
Query: 475 ENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
ENV DI + + + R ++R Y+ +I A YG+PQ R R
Sbjct: 179 ENVSDIAQGGEQEIFRSIINRAEKAGYRIDPKLIYAWQYGVPQLRPR 225
>gi|372269857|ref|ZP_09505905.1| DNA (cytosine-5-)-methyltransferase [Marinobacterium stanieri S30]
Length = 427
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 13/144 (9%)
Query: 385 YSTSEDSWEPIEGLRNCPERI--KEFVRNGFKSKIL----PLPGDVDVICGGPPCQGIS- 437
Y+ +DS RN P+ + E + N +K+L PG++D++ GGPPCQG S
Sbjct: 29 YANDKDSAAIDTYKRNFPDAVCSNEDINNLDFNKVLKGIGAAPGELDILIGGPPCQGFST 88
Query: 438 GYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLV 497
+F DD RN + ++ +E ++PK+ +MENV +L +K A +
Sbjct: 89 AGTKF------WDDPRNHLLRSYVKALEVVRPKWFIMENVEGLLTSNKGKYIHEAAKAFI 142
Query: 498 HMKYQARFGIIAAGCYGLPQFRLR 521
+ Y R + + YG+PQ R R
Sbjct: 143 EIGYFIRIEKVYSQEYGVPQRRKR 166
>gi|317054725|ref|YP_004103193.1| cytosine specific DNA methyltransferase [Paracoccus aminophilus]
gi|294869157|gb|ADF47149.1| cytosine specific DNA methyltransferase [Paracoccus aminophilus]
Length = 363
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+DV+CGGPPCQG S + DD RN+ + F+ +V + P++ + ENV I
Sbjct: 70 IDVLCGGPPCQGFSLAGK-----RLTDDPRNQLFLEFVRMVNLINPRFFVFENVSGITSM 124
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ L Y+ F ++ A YG+PQ R R
Sbjct: 125 SGGAILEAILQEFRTSGYECFFKVLNAADYGVPQARPR 162
>gi|219871980|ref|YP_002476355.1| moodification methylase HgaIA [Haemophilus parasuis SH0165]
gi|219692184|gb|ACL33407.1| moodification methylase HgaIA (M.HgaIA) (Cytosine-specific
methyltransferase HgaIA) (M.HgaI-1) [Haemophilus
parasuis SH0165]
Length = 357
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
+ L VD + PPCQG+S + R+V + +D RN I+ + +++ LKP Y+L+ENV
Sbjct: 68 IALTNQVDFLIASPPCQGMSVAGKNRDVSNMTNDNRNYLIMYVIAMIKKLKPAYILIENV 127
Query: 478 VDILKFD-----KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+LK + K + + L +Y F I+ A YG PQ R R
Sbjct: 128 PFLLKLELYIDNKLTPIKNILEDEFGSEYHIHFDILDAADYGTPQRRKR 176
>gi|323650463|gb|ADX97312.1| M.FspI [Fischerella muscicola SAG 1427-1 = PCC 73103]
Length = 385
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSP---LDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
++ + GGPPCQG S RN+ + L+D RN+ F++ VE +P YV+MENV +
Sbjct: 72 ELTALIGGPPCQGFS-----RNIPAGYRYLNDSRNQLYRTFLEFVEEFRPIYVVMENVPE 126
Query: 480 ILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
ILK + +L + Y+ + A YG+PQ R R
Sbjct: 127 ILKAYNGVIREEITQQLESLSYKVVSSSLNAAHYGIPQTRSR 168
>gi|338812669|ref|ZP_08624837.1| BsaWI methylase [Acetonema longum DSM 6540]
gi|337275331|gb|EGO63800.1| BsaWI methylase [Acetonema longum DSM 6540]
Length = 414
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 16/118 (13%)
Query: 413 FKSKILPLPGDVDVICGGPPCQGIS-GYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKY 471
+ +L L G +D++CGGPPCQG S G R N D RN + +++ V +KP+
Sbjct: 78 LRRHLLDLQGKIDIVCGGPPCQGFSVGGMRDGN------DSRNNLPIKYLEFVSLVKPRV 131
Query: 472 VLMENVVDILK--------FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ ENV + + F A L + +++L + Y A + II A +G+PQ R R
Sbjct: 132 IIFENVDGMARPFLSKPSSFKGAFLD-WLVNKLGELGYVAAYKIIDASKFGVPQIRKR 188
>gi|421717992|ref|ZP_16157293.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
gi|407222784|gb|EKE92582.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R038b]
Length = 439
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 7/121 (5%)
Query: 401 CPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIF 460
C + ++ ++N S + L D+ICGGPPCQG S FR + P RN+ F
Sbjct: 248 CGDITQQAIKNKISS--IALEQGADIICGGPPCQGFS-MAGFRADNDP----RNQLFRDF 300
Query: 461 MDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRL 520
+D+++ +KPK ++ ENV +L + K + + + Y +++A +G+ Q R
Sbjct: 301 IDVIKKVKPKIIVFENVEGLLSYQKGKIYKEIHQLFSELGYNTNGRVMSANEFGVSQKRK 360
Query: 521 R 521
R
Sbjct: 361 R 361
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 208 LDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
+DL+ G GGM+TG +++ D DKSAC +LK+N+PE V
Sbjct: 203 VDLFCGAGGMTTGF------KKAGIISLLGNDIDKSACITLKVNNPEINV 246
>gi|216711|dbj|BAA14377.1| HgaI methylase [Avibacterium paragallinarum]
gi|435623|dbj|BAA04206.1| HgaI methylase 1 [Avibacterium paragallinarum]
gi|1090538|prf||2019268A HgaI restriction methylase:ISOTYPE=1
Length = 365
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
+ L VD + PPCQG+S + R+V + +D RN I+ + +++ LKP Y+L+ENV
Sbjct: 76 IALTNQVDFLIASPPCQGMSVAGKNRDVSNMANDNRNYLIMYVIAMIKKLKPAYILIENV 135
Query: 478 VDILKFD-----KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+LK + K + + L +Y F I+ A YG PQ R R
Sbjct: 136 PFLLKLELYIDNKLTPIKNILEDEFGSEYHIHFDILDAADYGTPQRRKR 184
>gi|428776676|ref|YP_007168463.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
gi|428690955|gb|AFZ44249.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
Length = 430
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
++DV+CGGPPCQG S + L+DERN + F+ +V LKPKY +MENV +
Sbjct: 78 EIDVVCGGPPCQGFSLIGK-----RVLEDERNALVFHFLRLVLELKPKYFVMENVAGMAI 132
Query: 483 FDKASLGRYALSRLVHMKYQAR--FGIIAAGCYGLPQFRLR 521
L + + Y+ + + ++ A +G+PQ R R
Sbjct: 133 GKSQQLLNELIEKFQKNDYKVQLPYQVLNASNFGVPQNRNR 173
>gi|462652|sp|P25282.2|MTG1_HAEGA RecName: Full=Modification methylase HgaIA; Short=M.HgaIA; AltName:
Full=Cytosine-specific methyltransferase HgaIA; AltName:
Full=M.HgaI-1
Length = 357
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
+ L VD + PPCQG+S + R+V + +D RN I+ + +++ LKP Y+L+ENV
Sbjct: 68 IALTNQVDFLIASPPCQGMSVAGKNRDVSNMANDNRNYLIMYVIAMIKKLKPAYILIENV 127
Query: 478 VDILKFD-----KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+LK + K + + L +Y F I+ A YG PQ R R
Sbjct: 128 PFLLKLELYIDNKLTPIKNILEDEFGSEYHIHFDILDAADYGTPQRRKR 176
>gi|157164649|ref|YP_001466261.1| two-component sensor [Campylobacter concisus 13826]
gi|112801493|gb|EAT98837.1| modification methylase HphIA (Cytosine-specificmethyltransferase
HphIA) (M.HphIA) (M.Hphi(C)) [Campylobacter concisus
13826]
Length = 489
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VD+I GGPPCQ S N+ R +D P RN F+ V LKPK+++MENV +LK
Sbjct: 185 VDMIIGGPPCQSFSSANQQRVIDDP----RNVLYKYFVKFVNDLKPKFIIMENVRGMLK- 239
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + Y A++ + A + +PQ R+R
Sbjct: 240 ----VANQVVEDFDKIGYTAKYRLYDATNFSVPQKRIR 273
>gi|336377037|gb|EGO05372.1| hypothetical protein SERLA73DRAFT_68986 [Serpula lacrymans var.
lacrymans S7.3]
gi|336390079|gb|EGO31222.1| hypothetical protein SERLADRAFT_432870 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1211
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 19/116 (16%)
Query: 421 PGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI 480
PGD+D I G PCQ S N ++ + D ++ I+ + ++FL+P+Y + ENV
Sbjct: 819 PGDIDCIVAGFPCQPHSRLNMYQKAN----DLKSNLILNVLSWIDFLQPRYCIFENVRGF 874
Query: 481 LKFD---------KASLG------RYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L+++ K + G ++ + ++ M YQ R G++ A YG PQ R+R
Sbjct: 875 LQYNLKAHQVDEHKVAGGIEMGGLKFVMRVMIAMGYQVRVGLLQAAHYGTPQTRVR 930
>gi|260890952|ref|ZP_05902215.1| modification methylase NgoFVII [Leptotrichia hofstadii F0254]
gi|260859505|gb|EEX74005.1| modification methylase NgoFVII [Leptotrichia hofstadii F0254]
Length = 452
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
Query: 415 SKILPLP-GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
SK +PL G+VD+I GG PCQG S N+ R+ ++D+RN + I++ KPK+ +
Sbjct: 64 SKEIPLKKGEVDLIIGGFPCQGFSIANKNRS----MEDKRNFLYKEMLRIIKDKKPKFFI 119
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
ENV IL + + L + Y+ ++ A YG+PQ R R
Sbjct: 120 AENVKGILSLHNGEVIKMILKDFEDLGYKVDVKLLNAADYGVPQQRER 167
>gi|402553563|ref|YP_006594834.1| site-specific DNA methylase [Bacillus cereus FRI-35]
gi|401794773|gb|AFQ08632.1| site-specific DNA methylase [Bacillus cereus FRI-35]
Length = 430
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 420 LPG-DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVV 478
+PG DVDV+ GG PCQG S N R+ ++D+RN + + IV+ KPK+ + ENV
Sbjct: 63 IPGEDVDVVIGGFPCQGFSVANTKRS----MEDKRNFLYLELLRIVKDKKPKFFVAENVK 118
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L K + + + Y + ++ A YG+PQ R R
Sbjct: 119 GLLSMSKGKVIEMIKNDFEKLGYTVEYRVLNAADYGVPQLRER 161
>gi|389796771|ref|ZP_10199822.1| DNA-cytosine methyltransferase [Rhodanobacter sp. 116-2]
gi|388448296|gb|EIM04281.1| DNA-cytosine methyltransferase [Rhodanobacter sp. 116-2]
Length = 501
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 18/161 (11%)
Query: 367 DPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDV 426
DP + G NF +S + D + P+++ ++ G S+ DV
Sbjct: 51 DPEAAASHGHNFHGGDAAHSHARDI------TKTSPDQLARDLQAGPTSEAF------DV 98
Query: 427 ICGGPPCQGIS--GYNRFRNVDSPLD----DERNRQIVIFMDIVEFLKPKYVLMENVVDI 480
+ GGPPCQ + G + R VD+ + D R + + ++ VE P VL+ENV D+
Sbjct: 99 LVGGPPCQAFARVGRPKLREVDNHAEAFKHDPRAQLYIDYLRYVEAFAPLAVLVENVPDV 158
Query: 481 LKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L ++ L + Y R+ ++ A YG+PQ R R
Sbjct: 159 LNHGGQNIAEEIAEVLENKGYICRYTLLNAAFYGVPQMRER 199
>gi|350271400|ref|YP_004882708.1| cytosine-specific methyltransferase [Oscillibacter valericigenes
Sjm18-20]
gi|348596242|dbj|BAL00203.1| cytosine-specific methyltransferase [Oscillibacter valericigenes
Sjm18-20]
Length = 360
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G++D++ G PCQG S R R +S D RN+ ++ F+ +V L+PK + MENV ++
Sbjct: 70 GELDLLAGCSPCQGFS---RLRKGESGSTDPRNQLVLEFLRLVRGLRPKTIFMENVPGLI 126
Query: 482 KFDKA-SLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ L L L + Y + I+ YG+PQFR R
Sbjct: 127 NTEYGKKLFDKILPELTRLGYAVDYKIVDTADYGVPQFRRR 167
>gi|428211715|ref|YP_007084859.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
gi|428000096|gb|AFY80939.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
Length = 434
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
++DV+CGGPPCQG S + LDD RN + F+ IV L+PKY +MENV +
Sbjct: 76 EIDVVCGGPPCQGFSLMGK-----RALDDPRNSLVFHFIRIVTELQPKYFVMENVRGLTI 130
Query: 483 FDKASLGRYALSRLVHMKYQ--ARFGIIAAGCYGLPQFRLR 521
L + + YQ + ++ + YG+PQ R R
Sbjct: 131 GPHKQLLDEVIDKFHDSGYQVLTPYQVLNSAHYGVPQNRER 171
>gi|385229364|ref|YP_005789280.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Puno135]
gi|344335802|gb|AEN17763.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Puno135]
Length = 355
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV+ +KP+
Sbjct: 60 IKEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKAIKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +++ K +L + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|434393274|ref|YP_007128221.1| DNA-cytosine methyltransferase [Gloeocapsa sp. PCC 7428]
gi|428265115|gb|AFZ31061.1| DNA-cytosine methyltransferase [Gloeocapsa sp. PCC 7428]
Length = 427
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 410 RNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKP 469
R+ + I G +D++ GGPPCQG S + LDDERN + F +V L P
Sbjct: 83 RSHYPQAISSWDGRIDLVFGGPPCQGFSIMGK-----RSLDDERNNLVFHFYRLVTELSP 137
Query: 470 KYVLMENVVDILKFDKASLGRYAL------SRLVHMKYQARFGIIAAGCYGLPQFRLR 521
Y +MENV + ++G+Y L ++ YQ I+ A +G+PQ R R
Sbjct: 138 SYFVMENVPGM------AIGQYKLWCAQLKTQFEQAGYQVEVQILNAADFGVPQRRRR 189
>gi|188526860|ref|YP_001909547.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi470]
gi|188143100|gb|ACD47517.1| cytosine specific DNA methyltransferase (DDEM) [Helicobacter pylori
Shi470]
Length = 355
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV+ +KP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKAIKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +++ K +L + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|386752038|ref|YP_006225257.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi169]
gi|384558296|gb|AFH98763.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi169]
Length = 353
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV+ +KP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKAIKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +++ K +L + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|386750489|ref|YP_006223709.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi417]
gi|384556747|gb|AFH97215.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi417]
Length = 355
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV+ +KP+
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKAIKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +++ K +L + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|168821212|ref|ZP_02833212.1| modification methylase HaeIII [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|409247997|ref|YP_006888689.1| C-5 cytosine-specific DNA methylase family protein [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|205342142|gb|EDZ28906.1| modification methylase HaeIII [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320088731|emb|CBY98489.1| C-5 cytosine-specific DNA methylase family protein [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
Length = 361
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 409 VRNGFKSKILPLPGDVDVICGGPPCQGIS-GYNRFRNVDSPLDDERNRQIVIFMDIVEFL 467
+R+G S+I P DVD++ GG PCQ S NR P +D+R F+ ++E +
Sbjct: 58 IRHGDISQIQSFP-DVDIVVGGYPCQSFSMAGNR-----KPNNDDRTNLYKHFLRVLETI 111
Query: 468 KPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
PKY + ENV + S L+ YQ + ++ A YG+PQ R R
Sbjct: 112 HPKYFVAENVSGLKHLGAGSFLEQQLTAYKAAGYQVSYHMVNARAYGVPQSRKR 165
>gi|325678040|ref|ZP_08157677.1| putative modification methylase BspRI [Ruminococcus albus 8]
gi|324110257|gb|EGC04436.1| putative modification methylase BspRI [Ruminococcus albus 8]
Length = 358
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
+VDVI GGPPCQG S + +DD RN F+ +V ++PK +MENV ++K
Sbjct: 70 EVDVIIGGPPCQGFSLSGK-----RMIDDPRNILYKSFVRMVSDIQPKIFVMENVPGLVK 124
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K + + ++ Y+ G + A YG+PQ R R
Sbjct: 125 LFKGKVKDQVIEDFSNLGYEVTLGQLTACDYGVPQARKR 163
>gi|108763142|ref|YP_631786.1| DNA-cytosine methyltransferase [Myxococcus xanthus DK 1622]
gi|108467022|gb|ABF92207.1| DNA-cytosine methyltransferase [Myxococcus xanthus DK 1622]
Length = 505
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 424 VDVICGGPPCQGISGYNR------FRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
VDVI GGPPC + R F++ ++ D R V ++ V+ LKP ++MENV
Sbjct: 97 VDVIVGGPPCPAFTRVGRAKLREVFQHPEAFKQDPRATLYVQYLQYVQALKPLALVMENV 156
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
DIL + +LG L M Y+ + ++ A Y +PQ R R
Sbjct: 157 PDILNWGGHNLGDEICESLKAMDYRCAYTLLNAASYDVPQMRER 200
>gi|398808843|ref|ZP_10567701.1| DNA-methyltransferase Dcm [Variovorax sp. CF313]
gi|398086852|gb|EJL77459.1| DNA-methyltransferase Dcm [Variovorax sp. CF313]
Length = 429
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VD++ GGPPCQG S R LDDERN + IV LKP+ LMENV ++
Sbjct: 92 VDLVFGGPPCQGFSQIGMRR-----LDDERNELYQQYTRIVAKLKPRVFLMENVPNLALM 146
Query: 484 DKASLGRYALSRLVHMKYQARFGI-IAAGCYGLPQFRLR 521
+K L + Y + ++A YG+PQ R R
Sbjct: 147 NKGHFKHLILKEFADLGYSNTVMLRVSADDYGVPQTRQR 185
>gi|308182232|ref|YP_003926359.1| cytosine specific DNA methyltransferase [Helicobacter pylori
PeCan4]
gi|308064417|gb|ADO06309.1| cytosine specific DNA methyltransferase [Helicobacter pylori
PeCan4]
Length = 281
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 426 VICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDK 485
+I GGPPCQG S N+ +N+ L D RN + +++IV+ LKP+ ++ENV +++ K
Sbjct: 1 MIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCAK 56
Query: 486 ASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
RL + YQ + I+ A YG+PQ R R
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 92
>gi|386753565|ref|YP_006226783.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi112]
gi|384559823|gb|AFI00290.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Shi112]
Length = 281
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 426 VICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDK 485
+I GGPPCQG S N+ +N+ L D RN + +++IV+ LKP+ ++ENV +++ K
Sbjct: 1 MIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCAK 56
Query: 486 ASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
RL + YQ + I+ A YG+PQ R R
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 92
>gi|386749158|ref|YP_006222365.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
00-7128]
gi|384555401|gb|AFI03735.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
00-7128]
Length = 355
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 4/98 (4%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+++I GGPPCQG S N+ +N+ L D RN + ++DIV+ +KP+ ++ENV +++
Sbjct: 73 INMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIDIVKAIKPQIFIIENVKNLISC 128
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K + + + YQ + I+ A YG+PQ R R
Sbjct: 129 AKGYFLKEIKEKFNILGYQLSYHILNARDYGVPQSRER 166
>gi|385224707|ref|YP_005784632.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 83]
gi|332672853|gb|AEE69670.1| possible DNA (cytosine-5-)-methyltransferase [Helicobacter pylori
83]
Length = 281
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 426 VICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDK 485
+I GGPPCQG S N+ +N+ L D RN + +++IV+ LKP+ ++ENV +++ K
Sbjct: 1 MIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCAK 56
Query: 486 ASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
RL + YQ + I+ A YG+PQ R R
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 92
>gi|420454595|ref|ZP_14953425.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-14]
gi|393072945|gb|EJB73719.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-14]
Length = 281
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 426 VICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDK 485
+I GGPPCQG S N+ +N+ L D RN + +++IV+ +KP+ ++ENV +I+ K
Sbjct: 1 MIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKAIKPEIFIIENVKNIISCAK 56
Query: 486 ASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
RL + YQ + I+ A YG+PQ R R
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 92
>gi|385215328|ref|YP_005775284.1| cytosine specific DNA methyltransferase [Helicobacter pylori F32]
gi|317179856|dbj|BAJ57642.1| cytosine specific DNA methyltransferase [Helicobacter pylori F32]
Length = 281
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 426 VICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDK 485
+I GGPPCQG S N+ +N+ L D RN + +++IV+ LKP+ ++ENV +++ K
Sbjct: 1 MIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCAK 56
Query: 486 ASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
RL + YQ + I+ A YG+PQ R R
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 92
>gi|237703954|ref|ZP_04534435.1| DNA-cytosine methyltransferase [Escherichia sp. 3_2_53FAA]
gi|226901866|gb|EEH88125.1| DNA-cytosine methyltransferase [Escherichia sp. 3_2_53FAA]
Length = 367
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G++D+I GGPPCQG S + R D+ +DD RN+ ++ + D V KPK L+ENV +L
Sbjct: 44 GELDMILGGPPCQGFSSH---RINDAGVDDPRNKLLLRYFDFVCEFKPKAFLVENVSGLL 100
Query: 482 -KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K +A L R+ + ++ A YG+PQ R R
Sbjct: 101 WKRHEAHLKRFKFLASKNGYTLIHCDVLNARDYGVPQNRKR 141
>gi|295110825|emb|CBL24778.1| DNA-methyltransferase (dcm) [Ruminococcus obeum A2-162]
Length = 311
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 417 ILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMEN 476
I LP + DV+ GG PCQG S NR R L+DERN+ F ++ +PK+ + EN
Sbjct: 56 IYDLP-EADVVVGGFPCQGFSLANRKRT----LEDERNQLYKFFYSTIKIKQPKFFIAEN 110
Query: 477 VVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
V IL K + + +S Y ++ YG+PQ R R
Sbjct: 111 VRGILSLGKGEVIKQIVSDFEEAGYITTVNLVNMANYGVPQTRQR 155
>gi|417996763|ref|ZP_12637038.1| C-5 cytosine-specific DNA methylase [Lactobacillus casei M36]
gi|410534759|gb|EKQ09397.1| C-5 cytosine-specific DNA methylase [Lactobacillus casei M36]
Length = 337
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G VD++ G PPCQG + NR N D+RN I ++ V+ +KP +++MENV I+
Sbjct: 66 GHVDIVAGCPPCQGFTQMNR-NNKRRAYSDKRNILIEEYLRAVKIIKPNFIMMENVPQII 124
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+D+ + L L + Y F I +G+PQ R R
Sbjct: 125 YYDRFN---SMLEELKEIGYSIDFKEINVKDFGIPQSRRR 161
>gi|444301297|gb|AGD98764.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 354
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L ++++I G PPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQTDIKEKVIKLAKKLEINMIIGRPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +I+ K RL + YQ + I+ A YG+PQ R R
Sbjct: 110 KAIKPEIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|167042310|gb|ABZ07039.1| putative C-5 cytosine-specific DNA methylase [uncultured marine
crenarchaeote HF4000_ANIW97J3]
Length = 380
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 424 VDVICGGPPCQGISGYNRF-RNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
VDVI GGPPC+G S N+ RN+ +P+ NR ++ ++ ++ LKPK +MENV I
Sbjct: 83 VDVIIGGPPCKGFSLTNKMTRNMKNPM----NRLVMDYVAMIRKLKPKAFVMENVPGIFA 138
Query: 483 FDKASLGRYALSRLVHMK-YQARFGIIAAGCYGLPQFRLR 521
+ + + +S M Y ++ A YG+PQ R R
Sbjct: 139 MEGGKIVKDLISEFRSMGYYNTDSWLLNAADYGVPQIRKR 178
>gi|433591427|ref|YP_007280923.1| DNA-methyltransferase Dcm [Natrinema pellirubrum DSM 15624]
gi|433306207|gb|AGB32019.1| DNA-methyltransferase Dcm [Natrinema pellirubrum DSM 15624]
Length = 438
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 7/108 (6%)
Query: 421 PGDVDVICGGPPCQGIS--GYNRFRNVD--SPLDDERNRQIVIFMDIVEFLKPKYVLMEN 476
PG++D+I GGPPC S G ++ R++D SP D+R++ F+ VE L P+ LMEN
Sbjct: 78 PGELDLIAGGPPCPTFSMIGRSKIRSLDDKSPESDDRHQLYEDFLRFVESLSPRAFLMEN 137
Query: 477 VVDILKFDKA---SLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
V +L A S+ +++ + Y + A +G+PQ R R
Sbjct: 138 VTGMLSSTGANGDSIVDIICNQMEELGYTVDVQKVDAANFGVPQHRTR 185
>gi|421713626|ref|ZP_16152957.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
gi|407216992|gb|EKE86829.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R32b]
Length = 355
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV+ +KP+
Sbjct: 60 IKEKVIKLAKKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKAIKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +++ K RL + YQ + + A YG+PQ R R
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQTLNAKDYGVPQNRER 166
>gi|420398114|ref|ZP_14897327.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
gi|393014788|gb|EJB15959.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
Length = 281
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 426 VICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDK 485
+I GGPPCQG S N+ +N+ L D RN + +++IV+ LKP+ ++ENV +++ K
Sbjct: 1 MIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCAK 56
Query: 486 ASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
RL + YQ + I+ A YG+PQ R R
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 92
>gi|389749172|gb|EIM90349.1| S-adenosyl-L-methionine-dependent methyltransferase [Stereum
hirsutum FP-91666 SS1]
Length = 1217
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 53/118 (44%), Gaps = 18/118 (15%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
+P PGD+D+I G PCQ SG N ++ D P RN + + V++ +P +MENV
Sbjct: 823 MPQPGDIDIIVAGLPCQSYSGMNHNKDPDDP----RNELVANMLSYVDWYRPPIFVMENV 878
Query: 478 VDILKF------------DKASLGRYAL--SRLVHMKYQARFGIIAAGCYGLPQFRLR 521
IL F D G L L + YQ ++ A YG PQ R R
Sbjct: 879 FGILHFPLGGKKKGYRIVDGKPQGVIMLIFRVLTALGYQVHIALLHAPHYGSPQDRRR 936
>gi|325270471|ref|ZP_08137073.1| modification methylase DdeI [Prevotella multiformis DSM 16608]
gi|324987194|gb|EGC19175.1| modification methylase DdeI [Prevotella multiformis DSM 16608]
Length = 398
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VDVI GGPPCQG S + +DD+RN+ F+ +V PK +MENV +IL
Sbjct: 123 VDVIIGGPPCQGFSVAGK-----RIVDDDRNKLYKGFVRMVSCFHPKAFVMENVPNILTI 177
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + Y+ + ++ A YG+PQ R R
Sbjct: 178 GNGVIKESIIKDFSELGYKVSYKVLLASDYGVPQNRRR 215
>gi|119512221|ref|ZP_01631310.1| hypothetical protein N9414_08959 [Nodularia spumigena CCY9414]
gi|119463119|gb|EAW44067.1| hypothetical protein N9414_08959 [Nodularia spumigena CCY9414]
Length = 393
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
+V+V+ GGPPCQG S + R+ P RNR F+ +V ++P YV+MENV IL
Sbjct: 127 EVNVVVGGPPCQGFSVAGK-RDPKDP----RNRLFYEFVRVVSEIRPWYVVMENVPGILT 181
Query: 483 FDKASLGRYALSRLVHMKY-QARFGIIAAGCYGLPQFRLR 521
K S+ + + Y I+ + YG+PQ R R
Sbjct: 182 IQKGSVKTAIIEAFKSIGYPHISVAILESAAYGVPQIRPR 221
>gi|14520267|ref|NP_125742.1| modification methylase [Pyrococcus abyssi GE5]
gi|5457482|emb|CAB48973.1| Citosine-specific modificatrion methylase [Pyrococcus abyssi GE5]
gi|380740788|tpe|CCE69422.1| TPA: modification methylase [Pyrococcus abyssi GE5]
Length = 309
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 53/104 (50%), Gaps = 10/104 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLD----DERNRQIVIFMDIVEFLKPKYVLMENV 477
GDVDVI GGPPC+ + N R ++P D D R ++ F+ VE LKPK +MENV
Sbjct: 68 GDVDVIIGGPPCEPFTAINP-RRKENPKDRLYRDPIGRLVLEFVRFVERLKPKVFVMENV 126
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
I++ +K Y Y F ++ A YG PQ R R
Sbjct: 127 PQIMELEK-----YLRKEFDKAGYDIYFNVLNALDYGAPQVRRR 165
>gi|325564165|gb|ADZ31422.1| M.PsuNI [Pseudomonas stutzeri]
Length = 422
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
DVD++ GGPPCQG S + LDDERN + IVE L+P+ LMENV ++
Sbjct: 87 DVDLVFGGPPCQGYSQIGTRK-----LDDERNELYKQYARIVETLRPRVFLMENVPNLAL 141
Query: 483 FDKASLGRYALSRLVHMKYQARFG-IIAAGCYGLPQFRLR 521
+K + L + Y+ +++A + +PQ R R
Sbjct: 142 MNKGHFKKIILKHFAELGYKNTIMLLLSADEFSVPQTRQR 181
>gi|448332895|ref|ZP_21522115.1| DNA-cytosine methyltransferase [Natrinema pellirubrum DSM 15624]
gi|445624739|gb|ELY78114.1| DNA-cytosine methyltransferase [Natrinema pellirubrum DSM 15624]
Length = 432
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 7/108 (6%)
Query: 421 PGDVDVICGGPPCQGIS--GYNRFRNVD--SPLDDERNRQIVIFMDIVEFLKPKYVLMEN 476
PG++D+I GGPPC S G ++ R++D SP D+R++ F+ VE L P+ LMEN
Sbjct: 72 PGELDLIAGGPPCPTFSMIGRSKIRSLDDKSPESDDRHQLYEDFLRFVESLSPRAFLMEN 131
Query: 477 VVDILKFDKA---SLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
V +L A S+ +++ + Y + A +G+PQ R R
Sbjct: 132 VTGMLSSTGANGDSIVDIICNQMEELGYTVDVQKVDAANFGVPQHRTR 179
>gi|197124335|ref|YP_002136286.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K]
gi|196174184|gb|ACG75157.1| DNA-cytosine methyltransferase [Anaeromyxobacter sp. K]
Length = 508
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 13/111 (11%)
Query: 424 VDVICGGPPCQGISGYNRFRNVD----SPLDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
+D++ GGPPCQG S R + D RN FM+ + +PK +++ENV
Sbjct: 80 LDILIGGPPCQGFSRIGRGKLASLAGSRTAHDPRNTLYFAFMEAADRWQPKAIVIENVPG 139
Query: 480 ILKFD---------KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L D S A S LV Y+A F ++ A YG+PQ R R
Sbjct: 140 MLSVDVNSSSHPEEDLSFAEKAASDLVARGYRAGFAVLNAAMYGVPQLRER 190
>gi|335030375|ref|ZP_08523867.1| putative modification methylase HpaII [Streptococcus infantis
SK1076]
gi|334266311|gb|EGL84791.1| putative modification methylase HpaII [Streptococcus infantis
SK1076]
Length = 515
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 22/135 (16%)
Query: 403 ERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMD 462
ERI E + N I PGD+DVI GGPPCQG S + R+ P RN ++
Sbjct: 67 ERIFEVINNLRYGNIFK-PGDIDVIFGGPPCQGFSRLGK-RDASDP----RNMLFHEYLR 120
Query: 463 IVEFLKPKYVLMENVVDILKF----------DKASLGRYALSRLVHMKYQA------RFG 506
I+ ++P+YV+MENV IL D++ LG+ + ++ + Q
Sbjct: 121 IIRDVRPRYVVMENVTGILDMLMLDFPSVVRDESYLGQRLVKEILREELQELGYVLLDVQ 180
Query: 507 IIAAGCYGLPQFRLR 521
++ + +G+PQ R R
Sbjct: 181 VLNSANFGVPQQRNR 195
>gi|440636281|gb|ELR06200.1| hypothetical protein GMDG_07855 [Geomyces destructans 20631-21]
Length = 1529
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
+PLPGD+D I G PC G S N N DS + I +++F +PKY L+ENV
Sbjct: 800 IPLPGDIDFIAAGSPCVGYSILN--PNKDSAQGLKNQSLIADVASMIDFYRPKYALLENV 857
Query: 478 VDILKFDKASLGRYALSRL----VHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + K +LS+L V M YQ + ++ A +G PQ R R
Sbjct: 858 LTMAQKGKGR-NHDSLSQLICCIVGMGYQLQVYVLDAWSFGSPQGRSR 904
>gi|420500502|ref|ZP_14999048.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
gi|393152269|gb|EJC52570.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-30]
Length = 355
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQAAIKEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+KP+ ++ENV +++ K RL + YQ + + A YG+PQ R R
Sbjct: 110 GAIKPEIFIIENVKNLISCAKGYFLEEIKERLNALGYQVSYQTLNAKDYGVPQNRER 166
>gi|449085225|gb|AGE84599.1| cytosine DNA methyltransferase [Helicobacter pylori]
Length = 356
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L ++++I G PPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQTDIKEKVIKLAKKLEINMIIGRPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +I+ K RL + YQ + I+ A YG+PQ R R
Sbjct: 110 KAIKPEIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|387832218|ref|YP_003352155.1| cytosine specific DNA methyltransferase [Escherichia coli SE15]
gi|422357827|ref|ZP_16438492.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 110-3]
gi|422840183|ref|ZP_16888154.1| hypothetical protein ESPG_02840 [Escherichia coli H397]
gi|432498116|ref|ZP_19739900.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE216]
gi|432586158|ref|ZP_19822534.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE58]
gi|432689610|ref|ZP_19924867.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE161]
gi|432697197|ref|ZP_19932382.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE162]
gi|432757346|ref|ZP_19991884.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE22]
gi|432776716|ref|ZP_20010976.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE59]
gi|432790417|ref|ZP_20024540.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE65]
gi|432819183|ref|ZP_20052900.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE118]
gi|432825311|ref|ZP_20058971.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE123]
gi|432916554|ref|ZP_20121478.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE173]
gi|432923880|ref|ZP_20126387.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE175]
gi|432979201|ref|ZP_20167994.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE211]
gi|433099167|ref|ZP_20285322.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE139]
gi|433108638|ref|ZP_20294583.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE148]
gi|281181375|dbj|BAI57705.1| cytosine specific DNA methyltransferase [Escherichia coli SE15]
gi|315288374|gb|EFU47772.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 110-3]
gi|371607392|gb|EHN95966.1| hypothetical protein ESPG_02840 [Escherichia coli H397]
gi|431034220|gb|ELD46165.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE216]
gi|431124980|gb|ELE27424.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE58]
gi|431229021|gb|ELF25674.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE162]
gi|431233016|gb|ELF28616.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE161]
gi|431298084|gb|ELF87719.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE22]
gi|431332604|gb|ELG19826.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE59]
gi|431334264|gb|ELG21435.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE65]
gi|431371968|gb|ELG57672.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE118]
gi|431376502|gb|ELG61824.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE123]
gi|431449896|gb|ELH30462.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE173]
gi|431451112|gb|ELH31589.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE175]
gi|431499735|gb|ELH78753.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE211]
gi|431610682|gb|ELI79968.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE139]
gi|431621734|gb|ELI90525.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE148]
Length = 398
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G++D+I GGPPCQG S + R D+ +DD RN+ ++ + D V KPK L+ENV +L
Sbjct: 75 GELDMILGGPPCQGFSSH---RINDAGVDDPRNKLLLRYFDFVCEFKPKAFLVENVSGLL 131
Query: 482 -KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K +A L R+ + ++ A YG+PQ R R
Sbjct: 132 WKRHEAHLKRFKFLASKNGYTLIHCDVLNARDYGVPQNRKR 172
>gi|453054457|gb|EMF01909.1| DNA-cytosine methyltransferase [Streptomyces mobaraensis NBRC 13819
= DSM 40847]
Length = 655
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 410 RNGFKSKILPLPGDVDVICGGPPCQGIS--GYNRFRNV----DSPLDDERNRQIVIFMDI 463
R+ + + P G++D++ GGPPCQ S G ++ R++ D R ++D+
Sbjct: 98 RDRLEELLEPAKGEIDLVAGGPPCQPFSRAGRSKIRHLVEHHGRDPHDLRKELWSAYLDV 157
Query: 464 VEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ ++P+ VLMENV D+ D + R +L + Y + ++ A YG+PQ R R
Sbjct: 158 IKRIRPRAVLMENVPDMGLGDDFFVVRVIEQQLEELGYATQVRLVDAWRYGVPQHRKR 215
>gi|385800071|ref|YP_005836475.1| DNA-cytosine methyltransferase [Halanaerobium praevalens DSM 2228]
gi|309389435|gb|ADO77315.1| DNA-cytosine methyltransferase [Halanaerobium praevalens DSM 2228]
Length = 328
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
DVDVI GGPPCQG S R + ++D+RN F+ IV +KP+ ++ENV + +
Sbjct: 69 DVDVIVGGPPCQGFSLAGRIGR--TFIEDDRNYLFNEFVRIVSIVKPEMFILENVARMAR 126
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + ++ + Y ++ ++ YG+PQ R R
Sbjct: 127 HNNGNTIIEIINEFKKIDYDVKYEVLQTSDYGIPQRRKR 165
>gi|220903552|ref|YP_002478864.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219867851|gb|ACL48186.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 310
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 425 DVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFD 484
+V+ GG PCQG S N R+ + DERN + F+ IV L+P+Y L ENV IL +
Sbjct: 63 EVVVGGFPCQGFSQANLLRSGN----DERNSLYIEFLRIVSSLQPRYFLAENVRGILSLE 118
Query: 485 KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
S + L + Y+ ++ + +G+PQ R R
Sbjct: 119 GGSAIKKILGDFNNAGYRLKYKLFNVADFGVPQSRFR 155
>gi|384892053|ref|YP_005766146.1| cytosine specific DNA methyltransferase [Helicobacter pylori Cuz20]
gi|308061350|gb|ADO03238.1| cytosine specific DNA methyltransferase [Helicobacter pylori Cuz20]
Length = 355
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L +++I GGPPCQG S N+ +N+ L D RN + +++IV+ +KP+
Sbjct: 60 IKEKVIKLAQTLKINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKAIKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +++ K +L + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|421720709|ref|ZP_16159989.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R046Wa]
gi|407219301|gb|EKE89118.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R046Wa]
Length = 355
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I G PPCQG S N+ +N+ L D RN + +++IV+ +KP+
Sbjct: 60 IKEKVIKLAQKLEINMIIGEPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKAIKPE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +I+ K RL + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|347726862|gb|AEP19809.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L ++++I G PPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQTDIKEKVIKLAKKLEINMIIGRPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +I+ K RL + YQ + I+ A YG+PQ R R
Sbjct: 110 KAIKPEIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQDRER 166
>gi|294667855|ref|ZP_06733064.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292602358|gb|EFF45800.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 410
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSP---LDDERNRQIVIFMDIVEFLKPKYVLMENVV 478
G++D+I GGPPCQG S +++P +D RN ++ V +P+ VL+ENV
Sbjct: 79 GELDLIAGGPPCQGFS-------INAPKRSTEDSRNHLFREYLRFVTEFQPQAVLIENVP 131
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ F+ + L+ L + Y A I+ A YG+PQ R R
Sbjct: 132 GMVSFEGGATLDAILAALKQLGYDADVRILYAPHYGVPQTRWR 174
>gi|160873497|ref|YP_001552813.1| DNA-cytosine methyltransferase [Shewanella baltica OS195]
gi|378706736|ref|YP_005271630.1| DNA-cytosine methyltransferase [Shewanella baltica OS678]
gi|160859019|gb|ABX47553.1| DNA-cytosine methyltransferase [Shewanella baltica OS195]
gi|315265725|gb|ADT92578.1| DNA-cytosine methyltransferase [Shewanella baltica OS678]
Length = 385
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G+++++ GGPPCQG S + R ++ +DD RN+ ++ + D V+ L+PK L+ENV +L
Sbjct: 74 GELELLLGGPPCQGFSTH---RINNAGIDDPRNQLLLKYFDFVDGLQPKAFLIENVAGLL 130
Query: 482 KFDKASLGRYALSRLVHMKYQARF-GIIAAGCYGLPQFRLR 521
+ L+ Y F GI+ A YG+PQ R R
Sbjct: 131 WKRHENYLNQLLALAETHGYTIHFCGILNAKDYGVPQNRKR 171
>gi|218900598|ref|YP_002449009.1| modification methylase HaeIII [Bacillus cereus G9842]
gi|218544695|gb|ACK97089.1| modification methylase HaeIII [Bacillus cereus G9842]
Length = 313
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
D D++ GG PCQG S N R+V DDERN + + +++ +PK+ + ENV IL
Sbjct: 64 DGDIVIGGFPCQGFSVANMNRSV----DDERNTLYLEMLRVIQDKQPKFFVAENVKGILS 119
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K ++ + + Y ++ ++ A YG+PQ R R
Sbjct: 120 LGKGAVIKMICKDFENAGYNVQYKLLNAADYGVPQTRQR 158
>gi|385227820|ref|YP_005787753.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Puno120]
gi|344334258|gb|AEN14702.1| cytosine specific DNA methyltransferase [Helicobacter pylori
Puno120]
Length = 355
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
Query: 413 FKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV+ LK +
Sbjct: 60 IKEKVIKLAQTLEINMIIGGPPCQGFS--NKGKNLG--LKDSRNFLFLEYIEIVKALKLE 115
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV +++ K RL + YQ + I+ A YG+PQ R R
Sbjct: 116 IFIIENVKNLISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 166
>gi|229490017|ref|ZP_04383870.1| modification methylase DdeI [Rhodococcus erythropolis SK121]
gi|229323118|gb|EEN88886.1| modification methylase DdeI [Rhodococcus erythropolis SK121]
Length = 431
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
D+DV+ GGPPCQG S R D RN +++ E +KPK ++MENV +L
Sbjct: 158 DIDVLAGGPPCQGFSLAGRRDRADP-----RNHLFRNLLELAELVKPKVLVMENVRLLLS 212
Query: 483 FDKASLGRYA---LSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
G L + Y A + A YG+PQFR R
Sbjct: 213 MKDPDGGMVVDRILGEMAACGYDASVNTVNAQDYGVPQFRER 254
>gi|41584550|gb|AAS09913.1| BsmBI M1-M2 methyltransferase fusion protein [Geobacillus
stearothermophilus]
Length = 1068
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 19/123 (15%)
Query: 404 RIKEFVRNGFKSKILPLPGDVDVICGGPPCQGIS--GYNRFRNVDSPLDDERNRQIVIFM 461
++ E V+N K + L D+I GG PCQG S G+ + DDERN + F+
Sbjct: 852 QLIESVKNKLKGRTL------DLIAGGLPCQGFSTAGWRK-------PDDERNALVTYFL 898
Query: 462 DIVEFLKPKYVLMENVVDILKFDKASLGRY---ALSRLVHMKYQARFGIIAAGCYGLPQF 518
+V+ L P YVL+ENV ++ +K + + L L ++ Y+ + +++A YG+PQ
Sbjct: 899 QVVQKLMPNYVLIENVEGLINMNKGLVLKSIHEVLDELGYIYYKNPW-VLSAEQYGVPQM 957
Query: 519 RLR 521
R R
Sbjct: 958 RKR 960
>gi|347726866|gb|AEP19811.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 4/99 (4%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
++++I GGPPCQG S N+ +N+ L D RN + +++IV +KP+ ++ENV +++
Sbjct: 72 EINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVRAIKPEIFIIENVKNLIS 127
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K R + YQ + I+ A YG+PQ R R
Sbjct: 128 CAKGYFLEEIKERFKALGYQLSYQILNAKDYGVPQNRER 166
>gi|303236368|ref|ZP_07322958.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN]
gi|302483426|gb|EFL46431.1| DNA (cytosine-5-)-methyltransferase [Prevotella disiens FB035-09AN]
Length = 357
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+DVI GGPPCQG S RN +D+RN+ + ++ V +PK L+ENV +
Sbjct: 76 IDVIIGGPPCQGFS-LTGPRN----FEDKRNKLYLAMIETVHRYQPKAFLIENVPGMANL 130
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K ++ + R M Y I+ A YG+PQ R R
Sbjct: 131 YKGAVKDEIIRRFTAMGYNVSCQIVCAADYGVPQIRKR 168
>gi|117620606|ref|YP_855619.1| modification methylase DdeI [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117562013|gb|ABK38961.1| modification methylase DdeI [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 440
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 420 LPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
L G VD+I GGPPCQG S + R+ D P RN+ ++D+V +KPK +L+ENV
Sbjct: 87 LAGKVDLIVGGPPCQGFSLAGK-RDPDDP----RNKLAEQYIDVVRLVKPKLLLLENVRG 141
Query: 480 I-LKFDKA-SLGRYALSRLVHMK-----YQARFGIIAAGCYGLPQFRLR 521
KF K G S++V K Y + +I + +G+PQ R R
Sbjct: 142 FNTKFTKGRGEGSEPYSKIVKEKLEELGYGVSYKVITSSDWGVPQRRPR 190
>gi|421654595|ref|ZP_16094922.1| putative modification methylase HaeIII [Acinetobacter baumannii
Naval-72]
gi|408510366|gb|EKK12028.1| putative modification methylase HaeIII [Acinetobacter baumannii
Naval-72]
Length = 309
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 7/153 (4%)
Query: 371 SGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILP--LPGDVDVIC 428
SG GL+ G+ + + + I E + +G S I +P + DV+
Sbjct: 8 SGAGGLDLGFINAGFEVVWANDFDEDACKTYAHNIGEHIVHGNISSIFSDTIP-ECDVVI 66
Query: 429 GGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASL 488
GG PCQG S N R+ D D+RN+ + F+ IV KPKY + ENV IL D +
Sbjct: 67 GGFPCQGFSQANLKRSND----DDRNQLYLEFLRIVTDKKPKYFVAENVRGILSLDGGNA 122
Query: 489 GRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + Y+ ++ + YG+PQ R R
Sbjct: 123 IKKIIDDFKNAGYRIQYQLFNTADYGVPQTRYR 155
>gi|220903553|ref|YP_002478865.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219867852|gb|ACL48187.1| DNA-cytosine methyltransferase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 308
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
D D+I GG PCQG S N RN+ DERN + +V +PK+ L ENV IL
Sbjct: 61 DSDIIIGGFPCQGFSVANIKRNIS----DERNTLYKHLLRVVSAKQPKFFLAENVKGILS 116
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K + + L+ ++ Y + ++ A YG+PQ R R
Sbjct: 117 LGKGHVIQMILNDFENIGYTMQLKLLNAADYGVPQTRQR 155
>gi|310796311|gb|EFQ31772.1| C-5 cytosine-specific DNA methylase [Glomerella graminicola M1.001]
Length = 1141
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 405 IKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIV-IFMDI 463
++ G SK +P G VD + GG PC G++R N + + +N+ +V F
Sbjct: 672 LQTLALQGKFSKKVPPVGSVDFVSGGSPC---PGFSRLTNDKATPEQRKNQSLVAAFASF 728
Query: 464 VEFLKPKYVLMENVVDILKFDKASLGRYALSRL----VHMKYQARFGIIAAGCYGLPQFR 519
++ +PK+ L+ENV+DI++ K S+L V + YQ F I+ + YG PQ R
Sbjct: 729 IDVYRPKFGLLENVMDIVQ-TKTKRNEDVFSQLICAIVGLGYQTHFFIMDSWAYGSPQSR 787
Query: 520 LR 521
R
Sbjct: 788 SR 789
>gi|420414837|ref|ZP_14913953.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4053]
gi|393033804|gb|EJB34865.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4053]
Length = 439
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 401 CPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIF 460
C + ++ ++N S + L D+ICGGPPCQG S FR + P RN+ F
Sbjct: 248 CGDITQQAIKNKISS--IALEQGADIICGGPPCQGFS-MAGFRADNDP----RNQLFRDF 300
Query: 461 MDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRL 520
+D+++ +KPK ++ ENV +L + K + + + Y ++ A +G+ Q R
Sbjct: 301 IDVIKKVKPKIIVFENVEGLLSYQKGKIYKEIHQLFSELGYNTNGRVMFANEFGVSQKRR 360
Query: 521 R 521
R
Sbjct: 361 R 361
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 208 LDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV 257
+DL+ G GGM+TG +++ D DKSAC +LK+N+PE V
Sbjct: 203 VDLFCGAGGMTTGF------KKAGIISLLGNDIDKSACITLKVNNPEINV 246
>gi|156050777|ref|XP_001591350.1| hypothetical protein SS1G_07976 [Sclerotinia sclerotiorum 1980]
gi|154692376|gb|EDN92114.1| hypothetical protein SS1G_07976 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1392
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 14/124 (11%)
Query: 405 IKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDI- 463
++ F N K +I P PGDVDVI G PCQG S N + D L RN+ +V +
Sbjct: 713 VQAFEGNPQKFRI-PSPGDVDVILAGSPCQGFSRMNMNKGNDQSL---RNQSLVASVAAY 768
Query: 464 VEFLKPKYVLMENVVDILKFDKASLGRYA--LSRL----VHMKYQARFGIIAAGCYGLPQ 517
++F +PKY L+ENV L + LGR LS+L V + YQ + ++ + +G Q
Sbjct: 769 IDFYRPKYGLLENV---LTMAQKGLGREEDILSQLICTIVGLGYQVQLFLLDSWSFGSSQ 825
Query: 518 FRLR 521
R R
Sbjct: 826 ARSR 829
>gi|392330093|ref|ZP_10274709.1| C-5 cytosine-specific DNA methylase [Streptococcus canis FSL
Z3-227]
gi|391419965|gb|EIQ82776.1| C-5 cytosine-specific DNA methylase [Streptococcus canis FSL
Z3-227]
Length = 448
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G VD+ICGG PCQ S + R LD+ R + +KP +L+ENV +L
Sbjct: 66 GRVDIICGGFPCQAFSIAGKQRGF---LDETRGTLFFEIARAAQEIKPSLLLLENVKGLL 122
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
DK R LS L + Y A + I+ + +G+PQ R R
Sbjct: 123 SHDKGRTFRTILSTLDELGYDAEWQILNSKDFGVPQNRER 162
>gi|384895439|ref|YP_005769428.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A]
gi|315586055|gb|ADU40436.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A]
Length = 281
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 426 VICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDK 485
+I GGPPCQG S N+ +N+ + D RN + +++IV+ LKP+ ++ENV +++ K
Sbjct: 1 MIIGGPPCQGFS--NKGKNLG--IKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCAK 56
Query: 486 ASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
RL + YQ + I+ A YG+PQ R R
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 92
>gi|188575624|ref|YP_001912553.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|188520076|gb|ACD58021.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas oryzae pv.
oryzae PXO99A]
Length = 395
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSP---LDDERNRQIVIFMDIVEFLKPKYVLMENVV 478
G++D+I GGPPCQG S +++P +D RN ++ V +P+ VL+ENV
Sbjct: 64 GELDLIAGGPPCQGFS-------INAPKRSTEDSRNHLFREYLRFVTEFQPRAVLIENVP 116
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ F+ + L L + Y A I+ A YG+PQ R R
Sbjct: 117 GMVSFEGGATLDAILESLKQLGYDADVRILYAPHYGVPQTRWR 159
>gi|331085773|ref|ZP_08334856.1| hypothetical protein HMPREF0987_01159 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406696|gb|EGG86201.1| hypothetical protein HMPREF0987_01159 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 356
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+DVI GPPCQG S RN DDERN+ + +++V+ +PK ++ENV +
Sbjct: 70 IDVIIAGPPCQGFS-LTGPRN----FDDERNKLYLAVIEMVKQYQPKAFIIENVPGMATL 124
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K + L R M Y I+ A YG+PQ R R
Sbjct: 125 YKGQIKDEILRRFKKMGYNIECRILCAADYGVPQIRKR 162
>gi|410647642|ref|ZP_11358062.1| DNA (cytosine-5-)-methyltransferase [Glaciecola agarilytica NO2]
gi|410132738|dbj|GAC06461.1| DNA (cytosine-5-)-methyltransferase [Glaciecola agarilytica NO2]
Length = 418
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 14/125 (11%)
Query: 405 IKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
I+E ++N + ++ L G VD+I GGPPCQG S R RN P RN+ ++++V
Sbjct: 74 IQEILKN-YSEQLSNLKGKVDLIAGGPPCQGFSLAGR-RNAKDP----RNKLSDEYINMV 127
Query: 465 EFLKPKYVLMENVVDILKFDKASLGR-----YAL---SRLVHMKYQARFGIIAAGCYGLP 516
+ + PKY+++ENV K S G Y++ +RL + Y+ + + YG+P
Sbjct: 128 KLISPKYLVLENVRGFNSTFKDSEGNKEKQPYSMVVKARLEKLGYKVFTDYVHSENYGVP 187
Query: 517 QFRLR 521
Q R R
Sbjct: 188 QKRTR 192
>gi|381179821|ref|ZP_09888668.1| DNA-cytosine methyltransferase [Treponema saccharophilum DSM 2985]
gi|380768299|gb|EIC02291.1| DNA-cytosine methyltransferase [Treponema saccharophilum DSM 2985]
Length = 415
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP D D++CGGPPCQG S NR R +D P RN+ ++ ++ ++PK+ +MENV
Sbjct: 105 LPRFKDADLVCGGPPCQGFSMANRQRIIDDP----RNQLYKEYLKLLSVVRPKFFIMENV 160
Query: 478 VDILKF---DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ K K + Y L+ YQ ++ A +G+PQ R R
Sbjct: 161 RGMSKKWEEIKENFETY-LNANQKESYQFSSHLLYAEDFGVPQHRER 206
>gi|302690426|ref|XP_003034892.1| hypothetical protein SCHCODRAFT_255903 [Schizophyllum commune H4-8]
gi|300108588|gb|EFI99989.1| hypothetical protein SCHCODRAFT_255903 [Schizophyllum commune H4-8]
Length = 1412
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 27/136 (19%)
Query: 409 VRNGFKSKILPLP--------GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIF 460
V++ + PLP +D + GGPPCQ S N +++ + D R+ +
Sbjct: 991 VKDEYNQPFPPLPKPCTADKSSSIDFVFGGPPCQSFSKANHYKDPN----DIRSFLPLNM 1046
Query: 461 MDIVEFLKPKYVLMENVVDILKFD---------------KASLGRYALSRLVHMKYQARF 505
+ VE KP Y L+ENV +L F K S+ + L L+ + YQA
Sbjct: 1047 LSFVEAYKPDYFLLENVRGLLDFRLGTTTRGMQDANECIKNSMVKIILRTLIALGYQASV 1106
Query: 506 GIIAAGCYGLPQFRLR 521
++ AG +G+PQ R R
Sbjct: 1107 RVLQAGQFGVPQARER 1122
>gi|386087512|ref|YP_006003386.1| cytosine-specific methyltransferase [Streptococcus thermophilus
ND03]
gi|387910603|ref|YP_006340909.1| cytosine-specific methyltransferase [Streptococcus thermophilus
MN-ZLW-002]
gi|46019864|emb|CAE52388.1| putative cytosine-specific methyltransferase [Streptococcus
thermophilus]
gi|312279225|gb|ADQ63882.1| Cytosine-specific methyltransferase [Streptococcus thermophilus
ND03]
gi|387575538|gb|AFJ84244.1| putative cytosine-specific methyltransferase [Streptococcus
thermophilus MN-ZLW-002]
Length = 515
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 22/135 (16%)
Query: 403 ERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMD 462
ERI E + N I PGD+DVI GGPPCQG S + R+ P RN ++
Sbjct: 67 ERIFEVINNLRYGNIFE-PGDIDVIFGGPPCQGFSRLGK-RDASDP----RNMLFHEYLR 120
Query: 463 IVEFLKPKYVLMENVVDILKF----------DKASLGRYALSRLVHMKYQA------RFG 506
I+ ++PKYV+MENV IL D++ G+ + ++ + Q
Sbjct: 121 IIRDVRPKYVVMENVTGILDMLMLDFPSVVKDESYFGQRLVKEILREELQELGYILLDVQ 180
Query: 507 IIAAGCYGLPQFRLR 521
++ + +G+PQ R R
Sbjct: 181 VLNSANFGVPQQRNR 195
>gi|417993543|ref|ZP_12633890.1| C-5 cytosine-specific DNA methylase [Lactobacillus casei CRF28]
gi|410531479|gb|EKQ06205.1| C-5 cytosine-specific DNA methylase [Lactobacillus casei CRF28]
Length = 311
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G VD++ G PPCQG + NR N D+RN I ++ V+ +KP +++MENV I+
Sbjct: 66 GHVDIVAGCPPCQGFTQMNR-NNKRRAYSDKRNILIEEYLRAVKIIKPNFIMMENVPQII 124
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+D+ + L L + Y F I +G+PQ R R
Sbjct: 125 YYDRFN---SMLEELKEIGYSIDFKEINVKDFGIPQSRRR 161
>gi|393245687|gb|EJD53197.1| S-adenosyl-L-methionine-dependent methyltransferase [Auricularia
delicata TFB-10046 SS5]
Length = 829
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 59/132 (44%), Gaps = 19/132 (14%)
Query: 405 IKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
++ +R G + + V+ GGPPCQG S NR R SP DERN + V
Sbjct: 321 LRTIIRTGSAAGFPDRDESIGVLFGGPPCQGFSTLNRHR---SP-SDERNLLFANMLSWV 376
Query: 465 EFLKPKYVLMENVVDILKF---------DKASLG------RYALSRLVHMKYQARFGIIA 509
+ +P Y L+ENV +L D ++ + + L + YQAR +
Sbjct: 377 DVYRPTYFLLENVGGMLSIKLRLELAEKDHPAVDVEFGTVKLIVRVLAALGYQARVHYLQ 436
Query: 510 AGCYGLPQFRLR 521
AG YG PQ R R
Sbjct: 437 AGMYGAPQSRHR 448
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 208 LDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLE 267
L+L+SGCGG++T L ++ C T WA++ DKSA +L HP V D L
Sbjct: 269 LELFSGCGGLATAL---DEVFCQ---TSWAVERDKSAALTLSKMHPNCVVHTADVNDALR 322
Query: 268 LV 269
+
Sbjct: 323 TI 324
>gi|357410515|ref|YP_004922251.1| DNA-cytosine methyltransferase [Streptomyces flavogriseus ATCC
33331]
gi|320007884|gb|ADW02734.1| DNA-cytosine methyltransferase [Streptomyces flavogriseus ATCC
33331]
Length = 660
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 421 PGDVDVICGGPPCQGIS--GYNRFRNV----DSPLDDERNRQIVIFMDIVEFLKPKYVLM 474
P +D++ GGPPCQ S G ++ R++ D R ++D+V+ L+P+ VLM
Sbjct: 107 PAKIDLVAGGPPCQPFSRAGRSKIRSLVEHHGRDPQDRRKELWSAYLDVVKRLRPRAVLM 166
Query: 475 ENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
ENV D+ D + R +L ++ Y + ++ A YG+PQ R R
Sbjct: 167 ENVPDMGLGDDFFVVRTIEEQLENLGYATQVRLVDAWKYGVPQHRKR 213
>gi|416020937|ref|ZP_11566837.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea
str. B076]
gi|320321292|gb|EFW77421.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea
str. B076]
Length = 410
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSP---LDDERNRQIVIFMDIVEFLKPKYVLMENVV 478
G++D+I GGPPCQG S +++P +D RN ++ V +P+ VL+ENV
Sbjct: 79 GELDLIAGGPPCQGFS-------INAPKRSTEDSRNHLFREYLRFVTEFQPRAVLIENVP 131
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ F+ + L L + Y A I+ A YG+PQ R R
Sbjct: 132 GMVSFEGGATLDAILESLKDLGYDADVRILYAPHYGVPQTRWR 174
>gi|357400512|ref|YP_004912437.1| DNA-methyltransferase Dcm [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|337766921|emb|CCB75632.1| putative DNA-methyltransferase Dcm [Streptomyces cattleya NRRL 8057
= DSM 46488]
Length = 566
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 410 RNGFKSKILPLPGDVDVICGGPPCQGIS--GYNRFRNV----DSPLDDERNRQIVIFMDI 463
R+ + + P G +D++ GGPPCQ S G ++ R++ D R ++D+
Sbjct: 9 RDRLEELLEPAKGKIDLVAGGPPCQPFSRAGRSKIRHLVEHHGRDPHDLRKELWSAYLDV 68
Query: 464 VEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ ++P+ VLMENV D+ D + R +L + Y + ++ A YG+PQ R R
Sbjct: 69 IKRIRPRAVLMENVPDMGLGDDFFVVRVIEQQLEELGYATQVRLVDAWRYGVPQHRKR 126
>gi|347726860|gb|AEP19808.1| C5 cytosine DNA methyltransferase [Helicobacter pylori]
Length = 355
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L ++++I GGPPCQG S N+ +N+ L D RN + +++IV
Sbjct: 54 DITQTEIKEKVIKLAQKLEINMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIV 109
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+KP+ ++ENV +++ + R + YQ + I+ A YG+PQ R R
Sbjct: 110 RAIKPEIFIIENVKNLISCARGYFLEEIKERFKALGYQLSYQILNAKDYGVPQKRER 166
>gi|238801891|ref|YP_002925094.1| putative DNA methylase [Streptococcus phage 5093]
gi|238558577|gb|ACR45907.1| putative DNA methylase [Streptococcus phage 5093]
Length = 319
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 14/105 (13%)
Query: 422 GDVDVICGGPPCQG--ISGYNRFRNVDSPLDDERNRQIVIFMDIVEF---LKPKYVLMEN 476
G VD ICGG PCQ I+G+ R +D R +F +I F LKPKY+ +EN
Sbjct: 65 GHVDAICGGFPCQAFSIAGHRR------GFEDTRG---TLFFEIARFAAILKPKYLFLEN 115
Query: 477 VVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
V +L DK + LS L + Y + ++ + +G+PQ R R
Sbjct: 116 VKGLLNHDKGNTFEVILSALDELGYDVEWQVLNSKDFGVPQNRER 160
>gi|167746072|ref|ZP_02418199.1| hypothetical protein ANACAC_00767 [Anaerostipes caccae DSM 14662]
gi|373121713|ref|ZP_09535580.1| DNA (cytosine-5-)-methyltransferase [Erysipelotrichaceae bacterium
21_3]
gi|167654587|gb|EDR98716.1| DNA (cytosine-5-)-methyltransferase [Anaerostipes caccae DSM 14662]
gi|371664692|gb|EHO29861.1| DNA (cytosine-5-)-methyltransferase [Erysipelotrichaceae bacterium
21_3]
Length = 476
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VDV+ GGPPCQG S NR R +D P RN+ ++ +V + PK+ +MENV +
Sbjct: 176 VDVVVGGPPCQGFSMANRQRLIDDP----RNKLYKSYVKVVSIVSPKFFVMENVKGM--- 228
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
S+ + ++ Y+ I+ A +G+PQ R R
Sbjct: 229 --KSVSSQVIEDFTNIGYKVSCRILNAKDFGVPQNRER 264
>gi|390993340|ref|ZP_10263514.1| DNA-cytosine methyltransferase family protein [Xanthomonas
axonopodis pv. punicae str. LMG 859]
gi|372551927|emb|CCF70489.1| DNA-cytosine methyltransferase family protein [Xanthomonas
axonopodis pv. punicae str. LMG 859]
Length = 404
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSP---LDDERNRQIVIFMDIVEFLKPKYVLMENVV 478
G++D++ GGPPCQG S +++P +D RN ++ V +P+ VL+ENV
Sbjct: 73 GELDLVAGGPPCQGFS-------INAPKRSTEDSRNHLFREYLRFVTEFQPRAVLIENVP 125
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ F+ + L L + Y A I+ A YG+PQ R R
Sbjct: 126 GMVSFEGGATLDAILESLKQLGYDADVRILYAPHYGVPQTRWR 168
>gi|300775991|ref|ZP_07085850.1| possible DNA (cytosine-5-)-methyltransferase [Chryseobacterium
gleum ATCC 35910]
gi|300505124|gb|EFK36263.1| possible DNA (cytosine-5-)-methyltransferase [Chryseobacterium
gleum ATCC 35910]
Length = 415
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 413 FKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYV 472
+K + L G V ++ GGPPCQG S R RN DERN I ++ VE++ PK +
Sbjct: 73 YKKNLKSLRGSVSLVAGGPPCQGFSMAGR-RNE----TDERNDLINSYIKFVEYVMPKVI 127
Query: 473 LMENVVDI-LKFDKASLGRYALSRLVHMK-----YQARFGIIAAGCYGLPQFRLR 521
ENV ++F K A S +V K Y + ++ G YG+PQ R R
Sbjct: 128 FFENVKGFTMEFKKNKEKGIAYSSVVTQKLQNLGYYVKGKLVNFGDYGVPQKRTR 182
>gi|359404662|ref|ZP_09197489.1| DNA (cytosine-5-)-methyltransferase [Prevotella stercorea DSM
18206]
gi|357560090|gb|EHJ41497.1| DNA (cytosine-5-)-methyltransferase [Prevotella stercorea DSM
18206]
Length = 389
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
D+ ++CGGPPCQG S NR R LDD RN ++ ++ +PK+ +MENV ++
Sbjct: 87 DITLVCGGPPCQGFSMANRQR----ILDDPRNALYKQYLIFLKNTRPKFFIMENVKGMM- 141
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+K + + +YQ + ++ A YG+PQ R R
Sbjct: 142 -NKIEEIKQNFEEYLGGEYQYDYALLKAQDYGVPQNRER 179
>gi|159897859|ref|YP_001544106.1| DNA-cytosine methyltransferase [Herpetosiphon aurantiacus DSM 785]
gi|159890898|gb|ABX03978.1| DNA-cytosine methyltransferase [Herpetosiphon aurantiacus DSM 785]
Length = 415
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 21/119 (17%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI- 480
GD+D++ GGPPCQG S N R DE N + F+D V+ PK L+ENV +
Sbjct: 91 GDLDILMGGPPCQGYSSSN--RQASKETRDELNNMVKSFLDRVQDFSPKMFLLENVQGVT 148
Query: 481 --------------LKF----DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L F + A + Y + R + Y + ++ A +G+PQ R R
Sbjct: 149 WTASTDEMRIPSEQLSFIDNEEIADVKDYLVHRARELGYHIWYSVLDAADFGVPQHRKR 207
>gi|386748699|ref|YP_006221907.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
99-5656]
gi|384554941|gb|AFI06697.1| cytosine specific DNA methyltransferase [Helicobacter cetorum MIT
99-5656]
Length = 355
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 4/98 (4%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+++I GGPPCQG S N+ +N+ L D RN + +++IV+ +KP+ ++ENV +++
Sbjct: 73 INMIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLISC 128
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K ++ + YQ + I+ A YG+PQ R R
Sbjct: 129 AKGYFLEEIKAKFHALGYQLSYQILNAKDYGVPQSRER 166
>gi|386356566|ref|YP_006054812.1| DNA-cytosine methyltransferase [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|365807074|gb|AEW95290.1| DNA-cytosine methyltransferase [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 611
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 410 RNGFKSKILPLPGDVDVICGGPPCQGIS--GYNRFRNV----DSPLDDERNRQIVIFMDI 463
R+ + + P G +D++ GGPPCQ S G ++ R++ D R ++D+
Sbjct: 54 RDRLEELLEPAKGKIDLVAGGPPCQPFSRAGRSKIRHLVEHHGRDPHDLRKELWSAYLDV 113
Query: 464 VEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ ++P+ VLMENV D+ D + R +L + Y + ++ A YG+PQ R R
Sbjct: 114 IKRIRPRAVLMENVPDMGLGDDFFVVRVIEQQLEELGYATQVRLVDAWRYGVPQHRKR 171
>gi|420399493|ref|ZP_14898698.1| cytosine-specific methyltransferase [Helicobacter pylori CPY3281]
gi|393019642|gb|EJB20783.1| cytosine-specific methyltransferase [Helicobacter pylori CPY3281]
Length = 281
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 426 VICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDK 485
+I GGPPCQG S N+ +N+ L D RN + +++IV+ LKP+ +++NV +++ K
Sbjct: 1 MIIGGPPCQGFS--NKGKNLG--LKDSRNFLFLEYIEIVKALKPEIFIIKNVKNLISCAK 56
Query: 486 ASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
RL + YQ + I+ A YG+PQ R R
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 92
>gi|182677759|ref|YP_001831905.1| DNA-cytosine methyltransferase [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633642|gb|ACB94416.1| DNA-cytosine methyltransferase [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 488
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 10/106 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G++DV+ GGPPCQG S + R+V P RN ++ +++ L PK ++ENV +L
Sbjct: 121 GEIDVLLGGPPCQGFSLNSHVRSVQDP----RNYLFRHYVRLLKGLSPKIFVLENVPGML 176
Query: 482 KFDKAS-----LGRYALSRLVHMK-YQARFGIIAAGCYGLPQFRLR 521
+ L +LS V Y+ RF I+ A YG+PQ R R
Sbjct: 177 SLEGGHFFEEFLREVSLSTTVDCPGYEVRFKILNAAHYGVPQERFR 222
>gi|197105892|ref|YP_002131269.1| DNA (cytosine-5-)-methyltransferase [Phenylobacterium zucineum
HLK1]
gi|196479312|gb|ACG78840.1| DNA (cytosine-5-)-methyltransferase protein [Phenylobacterium
zucineum HLK1]
Length = 508
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 18/168 (10%)
Query: 360 IVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILP 419
IV DP + G NF + P + R PE++ + + P
Sbjct: 56 IVAAVEFDPAAAASHGANF------HPEDPRHGRPRDITRLTPEQL------ALELDLGP 103
Query: 420 LPGDVDVICGGPPCQGIS--GYNRFRNVDSPLD----DERNRQIVIFMDIVEFLKPKYVL 473
+ VDV+ GGPPCQ + G ++ R + + D R R + ++ V+ P V+
Sbjct: 104 VEQAVDVLVGGPPCQAFARVGRSKLREIAEHPEAFRLDARARLYLEYLRYVQAFLPLAVV 163
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
MENV D+L ++ + L + Y ++ ++ A YG+PQ R R
Sbjct: 164 MENVPDVLNHGGQNVAEETRTFLEELGYDVKYSLLNAAFYGVPQMRER 211
>gi|295110826|emb|CBL24779.1| DNA-methyltransferase (dcm) [Ruminococcus obeum A2-162]
Length = 312
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
D D+I GG PCQG S N R+ D DERN + +++ +PK+ L ENV I
Sbjct: 61 DCDIIIGGFPCQGFSVANTKRHED----DERNVLYKQLIRMIDAKRPKFFLAENVKGITN 116
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K + + L + Y+ + I+ A YG+PQ R R
Sbjct: 117 LAKGKVFQMILKDFTELGYKVKHKILNAADYGVPQTRQR 155
>gi|418519200|ref|ZP_13085307.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas axonopodis
pv. malvacearum str. GSPB1386]
gi|410700593|gb|EKQ59141.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas axonopodis
pv. malvacearum str. GSPB1386]
Length = 400
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSP---LDDERNRQIVIFMDIVEFLKPKYVLMENVV 478
G++D++ GGPPCQG S +++P +D RN ++ V +P+ VL+ENV
Sbjct: 69 GELDLVAGGPPCQGFS-------INAPKRSTEDSRNHLFREYLRFVTEFQPRAVLIENVP 121
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ F+ + L L + Y A I+ A YG+PQ R R
Sbjct: 122 GMVSFEGGATLDAILESLKQLGYDADVRILYAPHYGVPQTRWR 164
>gi|453067043|ref|ZP_21970333.1| modification methylase [Rhodococcus qingshengii BKS 20-40]
gi|452767430|gb|EME25670.1| modification methylase [Rhodococcus qingshengii BKS 20-40]
Length = 431
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
++DV+ GGPPCQG S R DD RN +++ + ++PK V+MENV +L
Sbjct: 158 NIDVLAGGPPCQGFSLAGRRDR-----DDPRNHLFRNLLELADLVRPKVVVMENVRLLLS 212
Query: 483 FDKASLGRYA---LSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
G L + Y A + A YG+PQFR R
Sbjct: 213 MKDPDGGMVVDRILGEMAACGYDASVNTVNAQDYGVPQFRER 254
>gi|217034606|ref|ZP_03440014.1| hypothetical protein HP9810_903g31 [Helicobacter pylori 98-10]
gi|216942961|gb|EEC22446.1| hypothetical protein HP9810_903g31 [Helicobacter pylori 98-10]
Length = 281
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 426 VICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDK 485
+I GG PCQG S N+ +N+ L D RN + +++IV+ LKPK ++ENV +++ K
Sbjct: 1 MIIGGSPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKALKPKIFIIENVKNLISCAK 56
Query: 486 ASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
RL + YQ + I+ A YG+PQ R R
Sbjct: 57 GYFLEEIKKRLNALGYQLSYQILNAKDYGVPQNRER 92
>gi|347533667|ref|YP_004842380.1| DNA methylase C-5 cytosine-specific family protein [Sphingobium
chungbukense]
gi|345452348|gb|AEN94388.1| DNA methylase C-5 cytosine-specific family protein [Sphingobium
chungbukense]
Length = 389
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G++DVI GGPPCQG S YN R V+ P R ++ IV+ ++P++++MENV I
Sbjct: 75 GEIDVIVGGPPCQGYSVYNHQRGVNDP----RAGLFREYLRIVKGIQPRWIVMENVTGIT 130
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + Y+ ++ A YG+PQ R R
Sbjct: 131 SIGGGGIVHEIFEGMKSLGYRVDMKVLRAEEYGVPQERRR 170
>gi|282880843|ref|ZP_06289537.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS
5C-B1]
gi|281305284|gb|EFA97350.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS
5C-B1]
Length = 374
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 7/148 (4%)
Query: 381 HWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGIS-GY 439
H +ED ++ + + E + + K K+ D++V+ GGPPCQG S
Sbjct: 42 HTHTIMVNEDIRSFVDHFDDSISKATERLNSNCKEKLYQELNDINVVIGGPPCQGFSMAG 101
Query: 440 NRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYAL------ 493
+R R +DD RN + I++ +P+Y + ENVV IL +
Sbjct: 102 SRIRKTSEFIDDSRNFLFRYYFKIIQKFEPQYFVFENVVGILSSKNGEILETIKSIFEDD 161
Query: 494 SRLVHMKYQARFGIIAAGCYGLPQFRLR 521
S + +Y + A YG+PQ R R
Sbjct: 162 SNFKNGRYYLHIKVFKAEEYGVPQQRRR 189
>gi|209883303|ref|YP_002287160.1| C-5 cytosine-specific DNA methylase [Oligotropha carboxidovorans
OM5]
gi|209871499|gb|ACI91295.1| C-5 cytosine-specific DNA methylase [Oligotropha carboxidovorans
OM5]
Length = 562
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 10/105 (9%)
Query: 420 LPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
LP +VDV+ G PPC S NR D ++ + IV F+ IV+++KPK MENV
Sbjct: 66 LPKNVDVVVGSPPCTQFSYANRGGKGDI---EDGLKDIVCFLKIVDYVKPKVWAMENVPR 122
Query: 480 ILKFDKASL---GRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + +A L GR L R H+ +AR ++ +GLPQ RLR
Sbjct: 123 VAQIIEAELRPGGR--LRRFHHLGIKAR--VVNMEEFGLPQRRLR 163
>gi|448585611|ref|ZP_21648004.1| DNA-cytosine methyltransferase [Haloferax gibbonsii ATCC 33959]
gi|445726311|gb|ELZ77928.1| DNA-cytosine methyltransferase [Haloferax gibbonsii ATCC 33959]
Length = 404
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 58/124 (46%), Gaps = 9/124 (7%)
Query: 401 CPERIKEFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSP-LDDERNRQI 457
PE I +R KS+I G VD++ GGPPCQG F V SP DERN
Sbjct: 51 SPEEIIGDIREVDKSEIHDTVGRNSVDLVAGGPPCQG------FSEVVSPDGSDERNHLF 104
Query: 458 VIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQ 517
V F+D V+ L+P+ L ENV I + ++ Y ++ + +G+PQ
Sbjct: 105 VNFIDWVDELEPQAALFENVRGIQNTAEGKFLDAVNDSFANIGYNVTHRVVTSSDFGVPQ 164
Query: 518 FRLR 521
R R
Sbjct: 165 HRRR 168
>gi|209528195|ref|ZP_03276665.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|209491380|gb|EDZ91765.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
Length = 315
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
V ++ GGPPCQG S + R+ + P RN F+ IV ++P YV+MENV IL
Sbjct: 127 VHLVVGGPPCQGFSVAGK-RDPNDP----RNHLFQQFIRIVAEVRPWYVVMENVPGILTL 181
Query: 484 DKASLGRYALSRLVHMKY-QARFGIIAAGCYGLPQFRLR 521
K + + S + Y I+A+ YG+PQ R R
Sbjct: 182 KKGKIKQAIFSAFQAIGYTNISVAILASAAYGVPQIRPR 220
>gi|200388503|ref|ZP_03215115.1| modification methylase HaeIII [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199605601|gb|EDZ04146.1| modification methylase HaeIII [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 361
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 409 VRNGFKSKILPLPGDVDVICGGPPCQGIS-GYNRFRNVDSPLDDERNRQIVIFMDIVEFL 467
+R+ S+I P DVD++ GG PCQ S NR P +D+R F+ ++E +
Sbjct: 58 IRHSDISQIQSFP-DVDIVVGGYPCQSFSMAGNR-----KPNNDDRTNLYKHFLRVLETV 111
Query: 468 KPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+PKY + ENV + S L+ YQ + ++ A YG+PQ R R
Sbjct: 112 RPKYFVAENVSGLKHLGAGSFLEQQLTAYKAAGYQVSYHMVNARAYGVPQSRKR 165
>gi|420406179|ref|ZP_14905350.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6311]
gi|393024200|gb|EJB25311.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6311]
Length = 281
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 426 VICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDK 485
+I GGPPCQG S N+ +N+ L D RN + +++IV LKP+ ++ENV +++ K
Sbjct: 1 MIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVRALKPEIFIIENVKNLISCAK 56
Query: 486 ASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L + YQ + I+ A YG+PQ R R
Sbjct: 57 GYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRER 92
>gi|116627564|ref|YP_820183.1| site-specific DNA methylase [Streptococcus thermophilus LMD-9]
gi|116100841|gb|ABJ65987.1| Site-specific DNA methylase [Streptococcus thermophilus LMD-9]
Length = 406
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 420 LPG-DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVV 478
+PG D+DV+ GG PCQG S N RN ++D RN + + +++ +PK+ + ENV
Sbjct: 62 IPGTDIDVVIGGFPCQGFSIANVKRN----MEDHRNFLYLELLRVIKDKQPKFFVAENVK 117
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L K + + + Y+ + ++ A YG+PQ R R
Sbjct: 118 GLLSMQKGKVINMIVKDFESLGYKVDYQLLNAAEYGVPQARER 160
>gi|423257754|ref|ZP_17238677.1| DNA (cytosine-5-)-methyltransferase [Bacteroides fragilis
CL07T00C01]
gi|423265279|ref|ZP_17244282.1| DNA (cytosine-5-)-methyltransferase [Bacteroides fragilis
CL07T12C05]
gi|387778122|gb|EIK40218.1| DNA (cytosine-5-)-methyltransferase [Bacteroides fragilis
CL07T00C01]
gi|392702937|gb|EIY96081.1| DNA (cytosine-5-)-methyltransferase [Bacteroides fragilis
CL07T12C05]
Length = 408
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 33/178 (18%)
Query: 371 SGKRGLNFKVH---WKGYSTSEDSWEPIEGLR-NCPERIKEF---------------VRN 411
+G GL+ +H WKG E S E L+ N E K F V +
Sbjct: 14 AGCGGLSLGLHLSGWKGVFAIEKSPFAFETLKYNLIENRKHFDWPSWLSISNHDINEVLD 73
Query: 412 GFKSKILPLPGDVDVICGGPPCQGIS-GYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
++ ++ L G +D++ GGPPCQG S R N D RN+ + ++ ++ +KPK
Sbjct: 74 KYQEELKGLQGTIDLVAGGPPCQGFSMAGKRVEN------DTRNQLVFSYIQFIKLVKPK 127
Query: 471 YVLMENVVDI-LKFDKAS------LGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L ENV F+K + ++ L + Y + II YG+PQ R R
Sbjct: 128 MILFENVKGFTFAFNKKTNKDAIPYSEVVINELKELGYNVKPHIIDFSKYGVPQRRKR 185
>gi|408826936|ref|ZP_11211826.1| site-specific DNA methylase [Streptomyces somaliensis DSM 40738]
Length = 335
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 420 LPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
+P + I GGPPCQG S + RN DD+RNR F+ IV LKP ++ENV
Sbjct: 52 IPQRPNWIVGGPPCQGYSTVGK-RN----RDDQRNRLFEHFLRIVGHLKPDGFVIENV-- 104
Query: 480 ILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L S + + YQ RF + +A +G+PQ R R
Sbjct: 105 -LGLKDMSYEQEVADAFKQLGYQVRFQVASAADHGVPQLRRR 145
>gi|300777384|ref|ZP_07087242.1| DNA (cytosine-5-)-methyltransferase [Chryseobacterium gleum ATCC
35910]
gi|300502894|gb|EFK34034.1| DNA (cytosine-5-)-methyltransferase [Chryseobacterium gleum ATCC
35910]
Length = 351
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 413 FKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYV 472
FK+ + P +D + PPCQG+S + RN++ L DERN + +D ++ P +V
Sbjct: 58 FKTLVESTPEKLDFLIASPPCQGMSVAGKNRNIEQMLKDERNYLVFKIIDFIKLKSPDFV 117
Query: 473 LMENVVDILKFDKASLGRY-----ALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L+ENV K ++ L+ L +Y+ + A YG+ Q R R
Sbjct: 118 LIENVPTFFKMVLPYQNQHLKVIEILNLLFGKEYKIEANVYDASEYGVAQRRTR 171
>gi|421489648|ref|ZP_15937025.1| putative modification methylase BanI [Streptococcus anginosus
SK1138]
gi|400374715|gb|EJP27631.1| putative modification methylase BanI [Streptococcus anginosus
SK1138]
Length = 418
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEF---LKPKYVLMENVV 478
G VDVICGG PCQ S R +D R +F +I F LKP+Y+ +ENV
Sbjct: 68 GHVDVICGGFPCQAFSIAGARRG----FEDTRG---TLFFEIARFASILKPRYLFLENVK 120
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L DK + LS L + Y + ++ + +G+PQ R R
Sbjct: 121 GLLNHDKGNTFEVILSALDELGYDVEWQVLNSKNFGVPQNRER 163
>gi|414159048|ref|ZP_11415340.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sp. F0441]
gi|410869031|gb|EKS16995.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sp. F0441]
Length = 315
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEF---LKPKYVLMENVV 478
G VD+ICGG PCQ S +D R +F +I F LKPKY+ +ENV
Sbjct: 65 GRVDIICGGFPCQAFS----IAGARRGFEDTRG---TLFFEIARFASILKPKYLFLENVK 117
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L DK + LS L + Y + ++ + +G+PQ R R
Sbjct: 118 GLLNHDKGNTFETILSALDELGYDVEWQVLNSKNFGVPQNRER 160
>gi|385261866|ref|ZP_10039983.1| putative modification methylase BspRI [Streptococcus sp. SK643]
gi|385192588|gb|EIF39993.1| putative modification methylase BspRI [Streptococcus sp. SK643]
Length = 406
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 420 LPG-DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVV 478
+PG D+DV+ GG PCQG S N RN ++D RN + + +++ +PK+ + ENV
Sbjct: 62 IPGTDIDVVIGGFPCQGFSIANSKRN----MEDHRNFLYLELLRVIKDKQPKFFVAENVK 117
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L K + + + Y+ + ++ A YG+PQ R R
Sbjct: 118 GLLSMQKGKVIDMIVKDFESLGYKVDYRLLNAAEYGVPQARER 160
>gi|403058608|ref|YP_006646825.1| Modification methylase FnuDI [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402805934|gb|AFR03572.1| Modification methylase FnuDI [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 361
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
Query: 415 SKILPLPGDVDVICGGPPCQGIS-GYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
S+I P DVD++ GG PCQ S NR P +D+R F+ ++E ++PKY +
Sbjct: 64 SQIQSFP-DVDIVVGGYPCQSFSMAGNR-----KPNNDDRTNLYKHFLRVLETVRPKYFV 117
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
ENV + S L+ YQ + ++ A YG+PQ R R
Sbjct: 118 AENVSGLKHLGAGSFLEQQLTAYKAAGYQVSYHLVNARAYGVPQSRKR 165
>gi|307155289|ref|YP_003890673.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
gi|306985517|gb|ADN17398.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
Length = 387
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
++ ++ GGPPCQG S + RN + P RN F+ +V ++P Y++MENV IL
Sbjct: 137 EIHLVVGGPPCQGFSVAGQ-RNPNDP----RNFLFYEFIRVVSEIRPWYIVMENVPGILT 191
Query: 483 FDKASLGRYALSRLVHMKYQA-RFGIIAAGCYGLPQFRLR 521
+K ++ + Y+A I+ + YG+PQ R R
Sbjct: 192 MNKGAVKEAIFEEFKAIGYEAISVAILESAAYGVPQIRPR 231
>gi|402904162|ref|XP_003914916.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1 [Papio anubis]
Length = 1706
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVL 473
+ + LP GDV+++CGGPPCQG SG NRF + +N +V F+ ++ +P++ L
Sbjct: 1263 RGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRT--YSKFKNSLVVSFLSYCDYYRPRFFL 1320
Query: 474 MENVVDIL 481
+ENV + +
Sbjct: 1321 LENVRNFV 1328
>gi|433615137|ref|YP_007191934.1| Site-specific DNA methylase [Sinorhizobium meliloti GR4]
gi|429553336|gb|AGA08335.1| Site-specific DNA methylase [Sinorhizobium meliloti GR4]
Length = 504
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 70/168 (41%), Gaps = 18/168 (10%)
Query: 360 IVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILP 419
IV DP+ + GLNF +S D P + + G P
Sbjct: 44 IVAAVENDPDAARSHGLNFHHGEDRHSIPRDITA------TSPADLATALGLG------P 91
Query: 420 LPGDVDVICGGPPCQGIS--GYNRFRNV----DSPLDDERNRQIVIFMDIVEFLKPKYVL 473
G DVI GGPPCQ + G ++ R + ++ D R R + ++ VE P V+
Sbjct: 92 AAGAFDVIVGGPPCQAFARVGRSKLREIAEHPEAFRHDPRARLYIEYLAYVEACAPLAVV 151
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV D+L +L L Y R+ ++ A YG+PQ R R
Sbjct: 152 IENVPDMLNHGGHNLAAEIGEILASKDYVVRYTLLNAAFYGVPQMRER 199
>gi|428212954|ref|YP_007086098.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
gi|428001335|gb|AFY82178.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
Length = 382
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
V +I GGPPCQG S + RN + P RNR F+ +V ++P YV++ENV IL
Sbjct: 128 VHLIVGGPPCQGFSVAGK-RNPNHP----RNRLFQEFIRVVSQVRPWYVVIENVPGILTL 182
Query: 484 DKASLGRYALSRLVHMKY-QARFGIIAAGCYGLPQFRLR 521
K ++ + L + Y I+ + YG+PQ R R
Sbjct: 183 QKGAIKQAICEALEAIGYSHVSIAILESADYGVPQIRPR 221
>gi|296393591|ref|YP_003658475.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985]
gi|296180738|gb|ADG97644.1| DNA-cytosine methyltransferase [Segniliparus rotundus DSM 44985]
Length = 372
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 421 PGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI 480
PG+ D++ GGPPCQ S R DER+ I F+ V+ L+PK LMENV +
Sbjct: 67 PGETDLVAGGPPCQPFSLAGSQRGE----ADERD-MIPEFVRAVQGLRPKAFLMENVRGL 121
Query: 481 LKFDKASLGRYALSRLVH----MKYQARFGIIAAGCYGLPQFRLR 521
L A R L RL ++Y ++ A YG+PQ R R
Sbjct: 122 LSPRHADYYRRVLERLAEPALGLRYTVTPNLVCAADYGVPQQRWR 166
>gi|9622224|gb|AAF89681.1| cytosine-specific methyltransferase [Bacillus sp. LU11]
Length = 365
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 10/103 (9%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
+ DV+ GGPPCQ S + R+ DDER + + ++ I+ ++PK + ENVV LK
Sbjct: 63 EADVVIGGPPCQSFSLVGKRRS-----DDERGQLVWQYLRIINEIRPKCFVFENVVG-LK 116
Query: 483 FDKASLGRYALSRLV----HMKYQARFGIIAAGCYGLPQFRLR 521
K + G L L+ + Y+ ++ ++ A YG+PQ R R
Sbjct: 117 SAKTAEGNLVLDELIIAFREIGYEVQWSVLNAADYGVPQRRKR 159
>gi|406875189|gb|EKD25010.1| hypothetical protein ACD_80C00131G0013 [uncultured bacterium (gcode
4)]
Length = 358
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
D+D + PPCQ +S + RN++ L D RN I ++ ++ KPKY+++ENV LK
Sbjct: 75 DIDFLIAWPPCQWVSVAGKNRNLNEMLKDSRNYLIKRVIEFIKLKKPKYIMIENVPAYLK 134
Query: 483 FDKASLGRYALSRLVHM-------KYQARFGIIAAGCYGLPQFRLR 521
++ L+ ++ + +Y ++ + YG+PQ R R
Sbjct: 135 LKLP--HKWNLATIIEILQDCFWKEYNVESRVLDSSEYGVPQKRTR 178
>gi|24416628|dbj|BAC22505.1| cytosine methyltransferase [Marchantia paleacea subsp. diptera]
Length = 284
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%)
Query: 457 IVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLP 516
I+ F+ ++ +P+Y L+ENV + + F+K R ++ L+ M YQ RFG++ AG +G+
Sbjct: 12 ILAFLSYADYFRPRYFLLENVRNFVSFNKGQTFRLTMASLLEMGYQVRFGVLQAGNFGVS 71
Query: 517 QFRLR 521
Q R R
Sbjct: 72 QSRKR 76
>gi|444424849|ref|ZP_21220301.1| modification methylase DdeI [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444241972|gb|ELU53490.1| modification methylase DdeI [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 418
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 13/117 (11%)
Query: 413 FKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYV 472
+ ++ L G VD+I GGPPCQG S R RN P RN+ ++ +VE + PKY+
Sbjct: 80 YPEQLTALKGKVDLIAGGPPCQGFSLAGR-RNAKDP----RNKLSDEYIKMVEIVSPKYL 134
Query: 473 LMENVVDILKFDKASLGRYA--------LSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L+ENV KA G+ A ++L + Y+ + + +G+PQ R R
Sbjct: 135 LLENVRGFNASFKALEGKKAKKPHSMIVKAKLEKLGYKVFTDFLCSADFGVPQKRTR 191
>gi|418062114|ref|ZP_12699924.1| DNA-cytosine methyltransferase [Methylobacterium extorquens DSM
13060]
gi|373564331|gb|EHP90450.1| DNA-cytosine methyltransferase [Methylobacterium extorquens DSM
13060]
Length = 483
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 426 VICGGPPCQGIS--GYNRFRNV----DSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
V+ GGPPCQ + G + R+V D+ LDD R ++ VE ++P V MENV+D
Sbjct: 100 VLVGGPPCQAYARVGRAKLRSVAARQDAHLDDPRVLLFRHWLRFVEAIRPHAVAMENVLD 159
Query: 480 ILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L ++ LV + Y R+ I+ A YG+PQ R R
Sbjct: 160 CLSVGGRNVMEETAEALVSLGYVPRYTIMNAVHYGVPQMRDR 201
>gi|355647183|ref|ZP_09054875.1| hypothetical protein HMPREF1030_03961 [Pseudomonas sp. 2_1_26]
gi|354828056|gb|EHF12186.1| hypothetical protein HMPREF1030_03961 [Pseudomonas sp. 2_1_26]
Length = 356
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G++D++ G PPCQG S + + RN S ++DERN I ++ ++ L+PK +++ENV +
Sbjct: 74 GELDLLAGCPPCQGFSTH-KTRNKSSSVEDERNNLIFSILEFIKTLEPKTIMIENVPGLA 132
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K + + + L + + ++ A +G+PQ R R
Sbjct: 133 KDPRIEEFKSEIGLLGYKIDKNTIQVLDAADFGVPQRRKR 172
>gi|385248556|ref|YP_005776775.1| cytosine specific DNA methyltransferase [Helicobacter pylori F57]
gi|317181351|dbj|BAJ59135.1| cytosine specific DNA methyltransferase [Helicobacter pylori F57]
Length = 281
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 426 VICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDK 485
+I GGPPCQG S N+ +N+ L D RN + ++IV+ LKP+ ++ENV +++ K
Sbjct: 1 MIIGGPPCQGFS--NKGKNLG--LKDSRNFLFLEHIEIVKALKPEIFIIENVKNLISCTK 56
Query: 486 ASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L + YQ + I+ A YG+PQ R R
Sbjct: 57 GYFLEEIKEKLNALGYQLSYQILNAKDYGVPQNRER 92
>gi|89055380|ref|YP_510831.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1]
gi|88864929|gb|ABD55806.1| DNA-cytosine methyltransferase [Jannaschia sp. CCS1]
Length = 373
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G++ V+ GGPPCQ S YN R + D R ++ IV+ L+P++++MENV I
Sbjct: 71 GELSVLVGGPPCQAYSVYNHQRG----MHDARASLFREYLRIVDGLRPEWIVMENVTGIY 126
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
R + + Y ++ A YG+PQ R R
Sbjct: 127 SIANGEAVRAIKAEFAALGYAVEDAVLRAEDYGVPQERRR 166
>gi|357048861|ref|ZP_09110094.1| hypothetical protein HMPREF9478_00077 [Enterococcus saccharolyticus
30_1]
gi|355384684|gb|EHG31745.1| hypothetical protein HMPREF9478_00077 [Enterococcus saccharolyticus
30_1]
Length = 333
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Query: 409 VRNGFKSKILPLPGD--VDVICGGPPCQGIS-GYNRFRNVDSPLDDERNRQIVIFMDIVE 465
+R+ KI L G+ VDV+ GGPPCQG S N R +DD RN+ F+ +V
Sbjct: 55 IRDVDNKKINELMGNEIVDVVIGGPPCQGFSMAGNIGRKF---VDDPRNQLFKEFVRVVN 111
Query: 466 FLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+PK +MENV + +K + + + Y + + ++ A YG+PQ R R
Sbjct: 112 ETQPKIFVMENVARLQTHNKGQTIKEIIDEFEKVGYYSTYKVLQAADYGVPQKRQR 167
>gi|221232312|ref|YP_002511465.1| DNA methylase [Streptococcus pneumoniae ATCC 700669]
gi|415699914|ref|ZP_11457743.1| modification methylase Rho11sI [Streptococcus pneumoniae 459-5]
gi|220674773|emb|CAR69346.1| putative DNA methylase [Streptococcus pneumoniae ATCC 700669]
gi|381315526|gb|EIC56288.1| modification methylase Rho11sI [Streptococcus pneumoniae 459-5]
Length = 369
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEF---LKPKYVLMENVV 478
G VDVICGG PCQ S R +D R +F +I F LKP+Y+ +ENV
Sbjct: 49 GHVDVICGGFPCQAFSIAGNRRG----FEDTRG---TLFFEIARFASILKPRYLFLENVK 101
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L D+ + LS L + Y + ++ + +G+PQ R R
Sbjct: 102 GLLNHDRGNTFEVILSALDELGYDVEWQVLNSKNFGVPQNRER 144
>gi|427722864|ref|YP_007070141.1| DNA-cytosine methyltransferase [Leptolyngbya sp. PCC 7376]
gi|427354584|gb|AFY37307.1| DNA-cytosine methyltransferase [Leptolyngbya sp. PCC 7376]
Length = 424
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
++DV+ GGPPCQG S + RN L+D RNR I ++ +++ L+PKY + ENV +
Sbjct: 80 EIDVMVGGPPCQGFSMMGK-RN----LNDPRNRLIFEYVRLLDELQPKYFVFENVQGMAS 134
Query: 483 FDKASLGRYALSRLVHMKYQA-RFGIIAAGCYGLPQFRLR 521
+ LS+L + YQ +I + YG PQ R R
Sbjct: 135 GKHRDFLQRLLSKLAAVGYQVLEPRVINSADYGAPQNRNR 174
>gi|448668261|ref|ZP_21686392.1| DNA-cytosine methyltransferase [Haloarcula amylolytica JCM 13557]
gi|445768343|gb|EMA19428.1| DNA-cytosine methyltransferase [Haloarcula amylolytica JCM 13557]
Length = 343
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 426 VICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDK 485
+I GGPPC+G S R ++ +DERN F++ V+F +P + +MENVV + +
Sbjct: 1 MIVGGPPCKGFSSIRPDRGTEA--EDERNGLYTDFVNYVDFFEPDFFIMENVVGLATHND 58
Query: 486 ASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + + Y A + I+ +GLPQ R R
Sbjct: 59 GITIQKIIDSVRDIGYSADWRIVNGANFGLPQRRER 94
>gi|257464589|ref|ZP_05628960.1| putative 5-methylcytosine methyltransferase [Actinobacillus minor
202]
gi|257450249|gb|EEV24292.1| putative 5-methylcytosine methyltransferase [Actinobacillus minor
202]
Length = 331
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VDV+ GGPPCQG S + + DD RN F+ +V+ +P++ +MENV +
Sbjct: 71 VDVVIGGPPCQGFSMAGKIGRTFA--DDPRNHLFKEFVRVVKLTQPRFFVMENVARLFTH 128
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + YQ ++ A +G+PQ R R
Sbjct: 129 NSGRTRTEIIQHFESLGYQVECKVLNAADFGVPQLRSR 166
>gi|350287792|gb|EGZ69028.1| DNA methyltransferase Dim-2 [Neurospora tetrasperma FGSC 2509]
Length = 1416
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 405 IKEFVRNGFKSKI---LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVI-F 460
+ + +R + K +P PG+VD I G PC G S + + V L+ +N+ +V F
Sbjct: 857 VDDLLRLALEGKFSDNVPRPGEVDFIAAGSPCPGFSLLTQDKKV---LNQVKNQSLVASF 913
Query: 461 MDIVEFLKPKYVLMENVVDILKF---DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQ 517
V+F +PKY ++ENV I++ K + LV M YQA+ + A +G PQ
Sbjct: 914 ASFVDFYRPKYGVLENVSGIVQTFVNRKQDVLSQLFCALVGMGYQAQLILGDAWAHGAPQ 973
Query: 518 FRLR 521
R R
Sbjct: 974 SRER 977
>gi|238917713|ref|YP_002931230.1| DNA (cytosine-5-)-methyltransferase [Eubacterium eligens ATCC
27750]
gi|238873073|gb|ACR72783.1| DNA (cytosine-5-)-methyltransferase [Eubacterium eligens ATCC
27750]
Length = 477
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
+VD++ GGPPCQG S NR R +D P RN ++++V+ + PK+ +MENV +L
Sbjct: 171 NVDIVVGGPPCQGFSMANRQRLIDDP----RNHLYKSYVEVVKKVHPKFFVMENVKGML- 225
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
S+ + Y I+ A +G+PQ R R
Sbjct: 226 ----SVAEQVKEDFRAIGYSVECHILNAKNFGVPQNRER 260
>gi|428219888|ref|YP_007083360.1| DNA-cytosine methyltransferase [Pseudanabaena sp. PCC 7367]
gi|427992231|gb|AFY71924.1| DNA-cytosine methyltransferase [Pseudanabaena sp. PCC 7367]
Length = 413
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G +D++ GPPCQ S + LDD R + + + +E ++PK VL+ENV +
Sbjct: 71 GQIDLLSAGPPCQSFS----YAGNQRGLDDSRGQLVYETLKTIEQVQPKMVLIENVKHLS 126
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + L RL ++Y+ ++ I+ A YG+ Q R R
Sbjct: 127 TINSGKVLKAILGRLHSLRYRTQWQILNANDYGVAQNRQR 166
>gi|433591426|ref|YP_007280922.1| DNA-methyltransferase Dcm [Natrinema pellirubrum DSM 15624]
gi|433306206|gb|AGB32018.1| DNA-methyltransferase Dcm [Natrinema pellirubrum DSM 15624]
Length = 751
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 14/114 (12%)
Query: 422 GDVDVICGGPPCQGIS--GYNRFRNVD---SPLDDERNRQIVIFMDIVEFLKPKYVLMEN 476
G+ D++ GGPPCQ +S GY D S LDDER ++DI+ L+PK ++MEN
Sbjct: 388 GEPDLVVGGPPCQSLSLAGYRSRLAADDDYSTLDDERTSLYEEYLDIIRELQPKALVMEN 447
Query: 477 VVDILK---------FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
V I+ D+ G ++ Y+ +F ++ GLPQ R R
Sbjct: 448 VEGIMTEVGDTGVRVIDRVLEGFEDIAATSEYGYEIQFDLVDLSKLGLPQSRDR 501
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNE 260
+ L +DL++G GG S GL + + +WA+D ++ A + +LNHPE RN
Sbjct: 316 EQTNLTAIDLFAGAGGFSCGL------AHSGFDMQWAIDFNEYATATYRLNHPEIPHRNI 369
Query: 261 AAEDFLE 267
D E
Sbjct: 370 VCSDIRE 376
>gi|183602700|ref|ZP_02964064.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis HN019]
gi|219682526|ref|YP_002468909.1| modification methylase SinI [Bifidobacterium animalis subsp. lactis
AD011]
gi|241190098|ref|YP_002967492.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|241195504|ref|YP_002969059.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|384194654|ref|YP_005580399.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis V9]
gi|387819961|ref|YP_006300004.1| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis B420]
gi|452892171|ref|YP_005578846.2| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis BLC1]
gi|183218118|gb|EDT88765.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis HN019]
gi|219620176|gb|ACL28333.1| modification methylase SinI [Bifidobacterium animalis subsp. lactis
AD011]
gi|240248490|gb|ACS45430.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|240250058|gb|ACS46997.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|295793085|gb|ADG32620.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis V9]
gi|386652662|gb|AFJ15792.1| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis B420]
gi|447219165|gb|AEN75813.2| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis BLC1]
Length = 453
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 14/114 (12%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
+P ++DV+ GGPPCQ S R + P R + ++D+ LKP+Y+++ENV
Sbjct: 138 IPQGREIDVMFGGPPCQAFSTAGARRAFEDP----RGNVFLRYLDLASELKPRYLVIENV 193
Query: 478 VDIL----------KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L K + + RY L++L M Y F + A +G Q R R
Sbjct: 194 RGLLSTPFPVESGGKPIRGGVMRYILNKLEEMGYGVSFNLYNAANFGAAQIRER 247
>gi|1709158|sp|P50192.1|MTHA_HAEPH RecName: Full=Modification methylase HphIA; Short=M.HphIA; AltName:
Full=Cytosine-specific methyltransferase HphIA; AltName:
Full=M.Hphi(C)
gi|732729|emb|CAA59690.1| site-specific DNA-methyltransferase (cytosine-specific)
[Haemophilus parahaemolyticus]
Length = 372
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VDV+ GGPPCQG S + + DD RN F+ +V+ +PK+ +MENV +
Sbjct: 113 VDVVIGGPPCQGFSMAGKIGRTFA--DDPRNHLFKEFVRVVKLTQPKFFVMENVARLFTH 170
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + Y+ + ++ A +G+PQ R R
Sbjct: 171 NSGKTRAEITEQFERLGYKVKCKVLNAADFGVPQLRSR 208
>gi|414072910|ref|ZP_11408819.1| DNA (cytosine-5-)-methyltransferase [Pseudoalteromonas sp.
Bsw20308]
gi|410804668|gb|EKS10724.1| DNA (cytosine-5-)-methyltransferase [Pseudoalteromonas sp.
Bsw20308]
Length = 392
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
GD+D++ GGPPCQG S + R + DD RN+ ++ + D VE L PK L+ENV +L
Sbjct: 77 GDLDLLLGGPPCQGFSTH-RIKGRGE--DDPRNQLLLRYFDFVEKLMPKAFLVENVPGLL 133
Query: 482 KFDKASLGRYALSRLVHMKYQARFG---IIAAGCYGLPQFRLR 521
A L KY+ G II A YG+PQ R R
Sbjct: 134 WPRHALYLNKFLELANEKKYKVITGKPLIINARDYGVPQSRRR 176
>gi|403161899|ref|XP_003322205.2| hypothetical protein PGTG_03742 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171974|gb|EFP77786.2| hypothetical protein PGTG_03742 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1210
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 54/117 (46%), Gaps = 18/117 (15%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP PGD D+I G PC S N R + D +N + + +LKP Y+ ENV
Sbjct: 612 LPRPGDFDLITAGFPCGSHSTLNVLRKAN----DSKNALCATALSFIAYLKPDYLFFENV 667
Query: 478 --VDILK-----------FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+LK +KA L R L+ + YQ +FG++ A +G PQ R R
Sbjct: 668 WCAGLLKTSFINPGNDSVLNKAFL-RIINGALISLGYQVQFGVLQAAQFGSPQARRR 723
>gi|417090983|ref|ZP_11956207.1| putative DNA methylase [Streptococcus suis R61]
gi|353533349|gb|EHC03007.1| putative DNA methylase [Streptococcus suis R61]
Length = 382
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEF---LKPKYVLMENVV 478
G VDVICGG PCQ S + + +D R +F DI F L+PKY+ +ENV
Sbjct: 65 GRVDVICGGFPCQAFSIAGK----RAGFEDTRG---TLFFDIARFASILRPKYLFLENVT 117
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L D + L L + Y A + + + +G+PQ R R
Sbjct: 118 GLLNHDNGNTFETILGALDELGYDAEWQVFNSKNFGVPQNRER 160
>gi|218900599|ref|YP_002449010.1| modification methylase HaeIII [Bacillus cereus G9842]
gi|218543463|gb|ACK95857.1| modification methylase HaeIII [Bacillus cereus G9842]
Length = 313
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
D D++ GG PCQG S NR R DERN + + ++ KP + + ENV IL
Sbjct: 61 DADIVIGGFPCQGFSVANRNRGTG----DERNTLYLEMLRVIRDKKPTFFVAENVKGILS 116
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
DK S+ + + Y+ ++ + YG+PQ R R
Sbjct: 117 LDKGSVIKMICKDFENAGYKVKYKLFNLADYGVPQKRER 155
>gi|336467555|gb|EGO55719.1| hypothetical protein NEUTE1DRAFT_67631 [Neurospora tetrasperma FGSC
2508]
Length = 1452
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 405 IKEFVRNGFKSKI---LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVI-F 460
+ + +R + K +P PG+VD I G PC G S + + V L+ +N+ +V F
Sbjct: 893 VDDLLRLALEGKFSDNVPRPGEVDFIAAGSPCPGFSLLTQDKKV---LNQVKNQSLVASF 949
Query: 461 MDIVEFLKPKYVLMENVVDILKF---DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQ 517
V+F +PKY ++ENV I++ K + LV M YQA+ + A +G PQ
Sbjct: 950 ASFVDFYRPKYGVLENVSGIVQTFVNRKQDVLSQLFCALVGMGYQAQLILGDAWAHGAPQ 1009
Query: 518 FRLR 521
R R
Sbjct: 1010 SRER 1013
>gi|167897069|ref|ZP_02484471.1| modification methylase (cytosine-specific DNA methylase)
[Burkholderia pseudomallei 7894]
Length = 349
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G++D++ G PPCQG S + R RN + ++DERN + F+ VE + PK V++ENV +
Sbjct: 74 GELDLLAGCPPCQGFSSH-RTRNKATSIEDERNDLVFEFIRFVEAMLPKTVMLENVPALA 132
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K + + L L + A + A YG+PQ R R
Sbjct: 133 KDWRVHELKSRLHALGYQIDDAFAQVKDAADYGVPQRRKR 172
>gi|225571372|ref|ZP_03780368.1| hypothetical protein CLOHYLEM_07470 [Clostridium hylemonae DSM
15053]
gi|225159848|gb|EEG72467.1| hypothetical protein CLOHYLEM_07470 [Clostridium hylemonae DSM
15053]
Length = 479
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 420 LPGDV-DVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVV 478
L GDV ++ G PPCQG S R N D ++DERN ++ ++ V+ LKP +++ENV
Sbjct: 69 LEGDVLHLLAGCPPCQGFSSIRRL-NRDEYIEDERNNLVLEYLRFVKELKPLTIMLENVP 127
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ K+ S + + ++ + Y I+ YG+PQ R R
Sbjct: 128 ALEKY---STFQSVVEKIKKLGYFVEVKIVNVASYGVPQNRKR 167
>gi|85094494|ref|XP_959891.1| hypothetical protein NCU02247 [Neurospora crassa OR74A]
gi|13936826|gb|AAK49954.1|AF348971_1 DNA methyltransferase Dim-2 [Neurospora crassa]
gi|28921348|gb|EAA30655.1| predicted protein [Neurospora crassa OR74A]
Length = 1454
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVI-FMDIVEFLKPKYVLMEN 476
+P PG+VD I G PC G S + + V L+ +N+ +V F V+F +PKY ++EN
Sbjct: 911 VPRPGEVDFIAAGSPCPGFSLLTQDKKV---LNQVKNQSLVASFASFVDFYRPKYGVLEN 967
Query: 477 VVDILKF---DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
V I++ K + LV M YQA+ + A +G PQ R R
Sbjct: 968 VSGIVQTFVNRKQDVLSQLFCALVGMGYQAQLILGDAWAHGAPQSRER 1015
>gi|270265139|ref|ZP_06193402.1| hypothetical protein SOD_k01780 [Serratia odorifera 4Rx13]
gi|270041073|gb|EFA14174.1| hypothetical protein SOD_k01780 [Serratia odorifera 4Rx13]
Length = 350
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 421 PGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI 480
PGD+D++ G PPCQG S + R RN + + D+RN I M V +PK V++ENV +
Sbjct: 70 PGDLDLLAGCPPCQGFSTH-RTRNKCTSVTDQRNDLIFDLMRFVRAFEPKTVMIENVPAL 128
Query: 481 LKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K ++ + L ++ + + YG+PQ R R
Sbjct: 129 AKDERITQVLNELRERGYLIGEKTLQVKDTAIYGVPQRRKR 169
>gi|386338842|ref|YP_006035011.1| DNA (cytosine-5-)-methyltransferase [Streptococcus gallolyticus
subsp. gallolyticus ATCC 43143]
gi|334281478|dbj|BAK29052.1| DNA (cytosine-5-)-methyltransferase [Streptococcus gallolyticus
subsp. gallolyticus ATCC 43143]
Length = 394
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G VD+ICGG PCQ S + R LD+ R + +KP +L+ENV +L
Sbjct: 66 GKVDLICGGFPCQAFSIAGKRRGF---LDETRGTLFFEIARAAKEIKPPLLLLENVKGLL 122
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
DK R LS L + Y A + ++ + +G+PQ R R
Sbjct: 123 SHDKGRTFRTILSTLDELGYDAEWQVLNSKDFGVPQNRER 162
>gi|167744430|ref|ZP_02417204.1| hypothetical protein Bpse14_40548 [Burkholderia pseudomallei 14]
Length = 349
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G++D++ G PPCQG S + R RN + ++DERN + F+ VE + PK V++ENV +
Sbjct: 74 GELDLLAGCPPCQGFSSH-RTRNKATSIEDERNDLVFEFIRFVEAMLPKTVMLENVPALA 132
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K + + L L + A + A YG+PQ R R
Sbjct: 133 KDWRVHELKSRLHALGYQIDDAFAQVKDAADYGVPQRRKR 172
>gi|336273254|ref|XP_003351382.1| hypothetical protein SMAC_03688 [Sordaria macrospora k-hell]
gi|380092903|emb|CCC09656.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1536
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 405 IKEFVRNGFKSKI---LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVI-F 460
+ + +R + K +P PG+VD I G PC G S + + V L+ +N+ +V F
Sbjct: 913 VDDLLRLALEGKFSDNVPRPGEVDFIAAGSPCPGFSLLTQDKKV---LNQVKNQSLVASF 969
Query: 461 MDIVEFLKPKYVLMENVVDILKF---DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQ 517
V+F +PKY ++ENV I++ K + L+ M YQA+ + A +G PQ
Sbjct: 970 ASFVDFYRPKYGVLENVSGIVQTFVNRKQDVLSQLFCALIGMGYQAQLTLGDAWAHGAPQ 1029
Query: 518 FRLR 521
R R
Sbjct: 1030 SRER 1033
>gi|164510148|emb|CAJ40945.1| putative DNA cytosine methyltransferase [Sordaria macrospora]
Length = 1536
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 405 IKEFVRNGFKSKI---LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVI-F 460
+ + +R + K +P PG+VD I G PC G S + + V L+ +N+ +V F
Sbjct: 913 VDDLLRLALEGKFSDNVPRPGEVDFIAAGSPCPGFSLLTQDKKV---LNQVKNQSLVASF 969
Query: 461 MDIVEFLKPKYVLMENVVDILKF---DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQ 517
V+F +PKY ++ENV I++ K + L+ M YQA+ + A +G PQ
Sbjct: 970 ASFVDFYRPKYGVLENVSGIVQTFVNRKQDVLSQLFCALIGMGYQAQLTLGDAWAHGAPQ 1029
Query: 518 FRLR 521
R R
Sbjct: 1030 SRER 1033
>gi|313667088|gb|ADR72987.1| M2.BsmFI [Geobacillus stearothermophilus]
Length = 365
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 10/101 (9%)
Query: 425 DVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFD 484
DV+ GGPPCQ S + R+ DDER + + ++ I+ ++PK + ENVV LK
Sbjct: 65 DVVIGGPPCQSFSLVGKRRS-----DDERGQLVWQYLRIINEIRPKCFVFENVVG-LKSA 118
Query: 485 KASLGRYALSRLV----HMKYQARFGIIAAGCYGLPQFRLR 521
K + G L L+ + Y+ ++ ++ A YG+PQ R R
Sbjct: 119 KTAEGNLVLDELIIAFREIGYEVQWSVLNAADYGVPQRRKR 159
>gi|46579926|ref|YP_010734.1| type II DNA modification methyltransferase [Desulfovibrio vulgaris
str. Hildenborough]
gi|46449342|gb|AAS95993.1| type II DNA modification methyltransferase, putative [Desulfovibrio
vulgaris str. Hildenborough]
Length = 487
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G VD++ GG PCQ S R LDD R + F+ ++ ++P++V+ ENV +L
Sbjct: 61 GTVDLVVGGTPCQAFSVAGLRRG----LDDPRGNLTLAFLRLLADIRPRWVVWENVPGVL 116
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
D+ + L L + Y + I+ A +G+PQ R R
Sbjct: 117 SIDRGRVFGAFLGGLAQLGYGFAYRILDAQYFGVPQRRRR 156
>gi|387153632|ref|YP_005702568.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1]
gi|311234076|gb|ADP86930.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1]
Length = 489
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G VD++ GG PCQ S R LDD R + F+ ++ ++P++V+ ENV +L
Sbjct: 63 GTVDLVVGGTPCQAFSVAGLRRG----LDDPRGNLTLAFLRLLADIRPRWVVWENVPGVL 118
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
D+ + L L + Y + I+ A +G+PQ R R
Sbjct: 119 SIDRGRVFGAFLGGLAQLGYGFAYRILDAQYFGVPQRRRR 158
>gi|398876925|ref|ZP_10632075.1| DNA-methyltransferase Dcm [Pseudomonas sp. GM67]
gi|398203383|gb|EJM90205.1| DNA-methyltransferase Dcm [Pseudomonas sp. GM67]
Length = 501
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 18/161 (11%)
Query: 367 DPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDV 426
DP+ + GLNF + +E +PI+ + P + K + + D+
Sbjct: 49 DPDAARSHGLNF------HDGAEAHSQPIDITKTSPADL------CLKLNLGNVADAFDI 96
Query: 427 ICGGPPCQGIS--GYNRFRNVDSP----LDDERNRQIVIFMDIVEFLKPKYVLMENVVDI 480
+ GGPPCQ + G ++ R ++ + D R + +++ V+ +P VLMENV DI
Sbjct: 97 VVGGPPCQAFARVGRSKLREIEEHPEAFMHDPRAQLYKKYLEYVDAFQPLAVLMENVPDI 156
Query: 481 LKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L ++ L Y + ++ A YG+PQ R R
Sbjct: 157 LNHGGQNIAEETCEVLEAKGYICGYTLLNAAFYGVPQMRER 197
>gi|417787172|ref|ZP_12434855.1| DNA-cytosine methyltransferase [Lactobacillus salivarius NIAS840]
gi|334307349|gb|EGL98335.1| DNA-cytosine methyltransferase [Lactobacillus salivarius NIAS840]
Length = 366
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
+ +VI GGPPCQG S RN D + D RN + +IV+ +KPK +MENV +L
Sbjct: 66 EAEVIIGGPPCQGFSMAGA-RNRDGFMGDPRNYLFKHYFNIVKKVKPKVFIMENVKGLLS 124
Query: 483 FDKASLGRYALS------RLVHMKYQARFGIIAAGCYGLPQFRLR 521
K + R +S RL Y ++ A +G+PQ R R
Sbjct: 125 MSKGEIFREIISIFSDKERLDGDSYTLYSRVVKAVEFGIPQKRER 169
>gi|15088756|ref|NP_150145.1| putative DNA methylase [Streptococcus phage MM1]
gi|15074902|emb|CAC48079.1| putative DNA methylase [Streptococcus phage MM1]
gi|73747029|gb|AAZ82425.1| C5 methyltransferase alpha subunit [Streptococcus phage MM1 1998]
Length = 385
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEF---LKPKYVLMENVV 478
G VDVICGG PCQ S R +D R +F +I F LKP+Y+ +ENV
Sbjct: 65 GHVDVICGGFPCQAFSIAGNRRG----FEDTRG---TLFFEIARFASILKPRYLFLENVK 117
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L D+ + LS L + Y + ++ + +G+PQ R R
Sbjct: 118 GLLNHDRGNTFEVILSALDELGYDVEWQVLNSKNFGVPQNRER 160
>gi|167046802|ref|YP_001661472.1| DNA methyltransferase [Acinetobacter venetianus]
gi|83833711|gb|ABC47668.1| DNA methyltransferase [Acinetobacter venetianus]
Length = 737
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSP----LDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
VD++ GGPPCQG S + + R V++ +D+RN + F +IV + K+ +MENV
Sbjct: 440 VDLVVGGPPCQGFSIFGKRRFVNTKNHQISEDKRNNLVFAFANIVIKSEAKWFIMENVPG 499
Query: 480 ILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
IL + Y+ +I A YG+PQ R R
Sbjct: 500 ILSAQNGEYVKAIQEFFAENGYRTECKVINAADYGVPQLRKR 541
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 403 ERIKEFVRNGFKSKILPLPGD--VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIF 460
E I++ + FK I GD VDVI GGPPCQG S N +S D RN +
Sbjct: 57 EDIRQIPLDKFKKVI----GDKEVDVIIGGPPCQGFSNMG---NKNS--SDPRNYLFENY 107
Query: 461 MDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRL 520
+ +V KPK L ENV +L + ++ + + Y + +I + YG+PQ R
Sbjct: 108 VSLVNTFKPKCFLFENVKGLLTMFEGRFFENIVNSFLSIGYSISYTLIDSSLYGVPQKRE 167
Query: 521 R 521
R
Sbjct: 168 R 168
>gi|298374832|ref|ZP_06984790.1| cytosine-specific methyltransferase [Bacteroides sp. 3_1_19]
gi|298269200|gb|EFI10855.1| cytosine-specific methyltransferase [Bacteroides sp. 3_1_19]
Length = 403
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 32/178 (17%)
Query: 371 SGKRGLNFKVH---WKGYSTSEDSWEPIEGLR-NCPERIKEF---------------VRN 411
+G GL+ +H WKG E S E L+ N + K F V
Sbjct: 15 AGCGGLSLGLHLSGWKGLFAIEKSPFAFETLKYNLIDNKKHFDWPSWLECKEHDIYDVLK 74
Query: 412 GFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKY 471
+ ++ L G +D++ GGPPCQG S + +D RN+ + +++ +E ++P+
Sbjct: 75 SHQEQLKSLRGTIDLVAGGPPCQGFSMAGKRIE-----EDIRNKLVYSYIEFIELVRPRL 129
Query: 472 VLMENVVDIL-----KFDKASLGRYA---LSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L ENV K DK Y+ + +L + Y + + CYG+PQ R R
Sbjct: 130 ILFENVKGFTYAFRKKTDKDKSIPYSQIVIEKLQDLGYNVKAEVFDFSCYGIPQKRKR 187
>gi|428299006|ref|YP_007137312.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
gi|428235550|gb|AFZ01340.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 6303]
Length = 438
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
Query: 409 VRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLK 468
+R+ + K G++ + GGPPCQG S + + LDD+RN+ ++ F+++V L
Sbjct: 66 IRDIIQHKYQDWDGEIAAVIGGPPCQGFSVAGKQK-----LDDDRNQLVLKFINLVIELN 120
Query: 469 PKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
P +MENV I A + A++ L+ +Y ++ A YG+PQ R R
Sbjct: 121 PSMFVMENVPAIEWKKFAGITGNAIA-LIEEQYILSKWLLTASDYGVPQKRQR 172
>gi|283834911|ref|ZP_06354652.1| C-5 cytosine-specific DNA methylase family protein [Citrobacter
youngae ATCC 29220]
gi|291069174|gb|EFE07283.1| C-5 cytosine-specific DNA methylase family protein [Citrobacter
youngae ATCC 29220]
Length = 400
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
Query: 420 LPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
L G++D+I GGPPCQG S + R +N S +DD RN ++ + D V+ KPK L+ENV
Sbjct: 85 LEGELDIIIGGPPCQGFSSH-RIKN--SGVDDPRNNLLIRYFDFVKVFKPKLFLVENVPG 141
Query: 480 IL-KFDKASLGRY-ALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L + K L ++ +L+ + K + A YG+PQ R R
Sbjct: 142 LLWEKHKGYLNKFKSLAECNNYKIIGPVKLNAKD-YGVPQNRNR 184
>gi|423678621|ref|ZP_17653497.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis BS 01]
gi|366041810|gb|EHN18291.1| site-specific DNA-methyltransferase [Bifidobacterium animalis
subsp. lactis BS 01]
Length = 436
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 14/114 (12%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
+P ++DV+ GGPPCQ S R + P R + ++D+ LKP+Y+++ENV
Sbjct: 121 IPQGREIDVMFGGPPCQAFSTAGARRAFEDP----RGNVFLRYLDLASELKPRYLVIENV 176
Query: 478 VDIL----------KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L K + + RY L++L M Y F + A +G Q R R
Sbjct: 177 RGLLSTPFPVESGGKPIRGGVMRYILNKLEEMGYGVSFNLYNAANFGAAQIRER 230
>gi|387821614|ref|YP_006301563.1| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis Bi-07]
gi|386654222|gb|AFJ17351.1| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis Bi-07]
Length = 502
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 14/114 (12%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
+P ++DV+ GGPPCQ S R + P R + ++D+ LKP+Y+++ENV
Sbjct: 187 IPQGREIDVMFGGPPCQAFSTAGARRAFEDP----RGNVFLRYLDLASELKPRYLVIENV 242
Query: 478 VDIL----------KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L K + + RY L++L M Y F + A +G Q R R
Sbjct: 243 RGLLSTPFPVESGGKPIRGGVMRYILNKLEEMGYGVSFNLYNAANFGAAQIRER 296
>gi|443326789|ref|ZP_21055431.1| DNA-methyltransferase Dcm [Xenococcus sp. PCC 7305]
gi|442793582|gb|ELS03027.1| DNA-methyltransferase Dcm [Xenococcus sp. PCC 7305]
Length = 422
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 59/128 (46%), Gaps = 22/128 (17%)
Query: 400 NCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVI 459
+C E + GFK+ D+DVI GGPPCQG S D L+D RN+ I
Sbjct: 60 SCEELLAAIQNKGFKT-------DIDVITGGPPCQGYSYMG-----DRILEDPRNQLIFE 107
Query: 460 FMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIA------AGCY 513
+ I+ ++PKY + ENV I + R L+ L+ Q + I+ + Y
Sbjct: 108 YARIISTIRPKYFIFENVPGI----ASGKHRQFLTELIKNFNQNNYSIVEPIQILDSSLY 163
Query: 514 GLPQFRLR 521
G PQ R R
Sbjct: 164 GAPQKRKR 171
>gi|227431296|ref|ZP_03913349.1| DNA (cytosine-5-)-methyltransferase [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
gi|227352889|gb|EEJ43062.1| DNA (cytosine-5-)-methyltransferase [Leuconostoc mesenteroides
subsp. cremoris ATCC 19254]
Length = 367
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 420 LPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
+ +VD + PPCQGIS + R+++ D+RN I + ++E +KP YV++ENV
Sbjct: 71 IENNVDFMIASPPCQGISVAGQNRSIEDMAKDQRNYLITKVIQMIEEVKPSYVIIENVPL 130
Query: 480 ILKFDKASLGRYA-LSRLVHMK----YQARFGIIAAGCYGLPQFRLR 521
ILK G A + L++ K Y F ++ YG PQ R R
Sbjct: 131 ILKLKLLIDGELATVEELLNSKFKDTYNVDFDVLDTSDYGTPQVRRR 177
>gi|208434021|ref|YP_002265687.1| cytosine specific DNA methyltransferase [Helicobacter pylori G27]
gi|208431950|gb|ACI26821.1| cytosine specific DNA methyltransferase (putative type II)
[Helicobacter pylori G27]
Length = 281
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 426 VICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDK 485
+I GGPPCQG S N+ +N+ L D RN + +++IV+ +KP+ ++ENV +++ K
Sbjct: 1 MIIGGPPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKAIKPEIFIIENVKNLISCAK 56
Query: 486 ASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
RL + YQ + I+ YG+PQ R R
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNVKDYGVPQNRER 92
>gi|384190309|ref|YP_005576057.1| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis BB-12]
gi|384191445|ref|YP_005577192.1| DNA (cytosine-5-)-methyltransferase [Bifidobacterium animalis
subsp. lactis CNCM I-2494]
gi|289177801|gb|ADC85047.1| DNA-cytosine methyltransferase [Bifidobacterium animalis subsp.
lactis BB-12]
gi|340364182|gb|AEK29473.1| DNA (cytosine-5-)-methyltransferase [Bifidobacterium animalis
subsp. lactis CNCM I-2494]
Length = 513
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 14/114 (12%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
+P ++DV+ GGPPCQ S R + P R + ++D+ LKP+Y+++ENV
Sbjct: 198 IPQGREIDVMFGGPPCQAFSTAGARRAFEDP----RGNVFLRYLDLASELKPRYLVIENV 253
Query: 478 VDIL----------KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L K + + RY L++L M Y F + A +G Q R R
Sbjct: 254 RGLLSTPFPVESGGKPIRGGVMRYILNKLEEMGYGVSFNLYNAANFGAAQIRER 307
>gi|29350162|ref|NP_813665.1| cytosine-specific methyltransferase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29342074|gb|AAO79859.1| putative cytosine-specific methyltransferase [Bacteroides
thetaiotaomicron VPI-5482]
Length = 402
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 30/176 (17%)
Query: 371 SGKRGLNFKVH---WKGYSTSEDSWEPIEGLR-NCPERIKEF---------------VRN 411
+G GL+ +H W+G E + + + L N E++ F V
Sbjct: 11 AGCGGLSLGLHNAGWQGLFAVEKNADAFKTLEYNLIEKVNHFLWPDWLPKTSHDINVVLK 70
Query: 412 GFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKY 471
+K ++L L VD++ GGPPCQG S R + +D+RN + ++ ++ ++PK
Sbjct: 71 DYKEQLLGLQRKVDLVVGGPPCQGFSMAGRRKE-----NDQRNNLVKSYIKFIKTIQPKI 125
Query: 472 VLMENVVDI-LKFDK-----ASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ ENV L+F K Y L Y + ++ G YG+PQ R R
Sbjct: 126 IFFENVKGFTLEFRKNKDKGKEYSSYVERALNRAGYYVKGELVNFGEYGIPQKRTR 181
>gi|420406011|ref|ZP_14905184.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6271]
gi|393021830|gb|EJB22960.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6271]
Length = 281
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 426 VICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDK 485
+I GG PCQG S N+ +N+ L D RN + +++IV+ LKP+ ++ENV +++ K
Sbjct: 1 MIIGGSPCQGFS--NKGKNLG--LKDPRNFLFLEYIEIVKALKPEIFIIENVKNLISCTK 56
Query: 486 ASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
RL + YQ + I+ A YG+PQ R R
Sbjct: 57 GYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 92
>gi|299753284|ref|XP_001833175.2| hypothetical protein CC1G_01237 [Coprinopsis cinerea okayama7#130]
gi|298410229|gb|EAU88864.2| hypothetical protein CC1G_01237 [Coprinopsis cinerea okayama7#130]
Length = 1253
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 17/112 (15%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
++D I GGPPCQG S N R +D R V + E P Y L+ENV +L
Sbjct: 830 NIDFILGGPPCQGFSRANHTRKE----NDIRTTMPVNMLSYAEHYDPTYFLLENVTGLLD 885
Query: 483 FD-------------KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
F + + ++ + L+ + YQ + ++ A YG+PQ R R
Sbjct: 886 FKLRDHRLGSNGEIIERGMLKFIVRALIALGYQVHWNVLQAAQYGVPQSRNR 937
>gi|443310146|ref|ZP_21039810.1| DNA-methyltransferase Dcm [Synechocystis sp. PCC 7509]
gi|442779824|gb|ELR90053.1| DNA-methyltransferase Dcm [Synechocystis sp. PCC 7509]
Length = 393
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
+V ++ GGPPCQG S + RN + D RNR F+ IV ++P YV+MENV IL
Sbjct: 125 AEVHLVVGGPPCQGFSVAGK-RNPN----DARNRLFQEFVRIVSEIRPWYVVMENVPGIL 179
Query: 482 KFDKASLGRYALSRLVHMKY-QARFGIIAAGCYGLPQFRLR 521
S+ + + Y I+ + YG+PQ R R
Sbjct: 180 TIKNGSVKKAICDAFTAIGYPNISIAILESADYGVPQIRPR 220
>gi|218245850|ref|YP_002371221.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|257058898|ref|YP_003136786.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
gi|218166328|gb|ACK65065.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|256589064|gb|ACU99950.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
Length = 418
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+DV+ GGPPCQG S + L+DERN I F+ +V L+PKY ++ENV +
Sbjct: 76 IDVVFGGPPCQGFSLMGK-----RVLEDERNALIAHFIRLVLELQPKYFVLENVPGMAIG 130
Query: 484 DKASLGRYALSRLVHMKYQAR--FGIIAAGCYGLPQFRLR 521
L + + + Y+ + I+ A YG+PQ R R
Sbjct: 131 SHQQLLQEIFDKFSYHGYEVETNYQILNAANYGVPQNRER 170
>gi|311064356|ref|YP_003971081.1| cytosine methyl transferase Dcm [Bifidobacterium bifidum PRL2010]
gi|310866675|gb|ADP36044.1| Dcm Cytosine methyl transferase [Bifidobacterium bifidum PRL2010]
Length = 326
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
D D++ GG PCQG S N RN D+RN+ + ++ I++ KP + + ENV IL
Sbjct: 73 DCDIMIGGFPCQGFSMANTKRNAL----DKRNKLYLQYIRILKAKKPMFFVAENVKGILT 128
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K + + +S Y+ + ++ A YG+PQ R R
Sbjct: 129 LGKGEVIKAIVSDFAEAGYRVVYQLLNAADYGVPQTRQR 167
>gi|227112465|ref|ZP_03826121.1| putative C-5 cytosine-specific DNA methylase [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 390
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G++D+I GGPPCQG S + R +N +DD RN ++ + + V +PK L+ENV +L
Sbjct: 80 GELDIILGGPPCQGFSTH-RIKNAG--VDDPRNALLLKYFEFVHEFQPKAFLVENVTGLL 136
Query: 482 KFDKASLGRYALSRLVHMKYQARFG-IIAAGCYGLPQFRLR 521
+ + Y +F II A YG+PQ R R
Sbjct: 137 WKRHEKYFHQFIDLAQNSHYTLKFSNIINAVDYGVPQNRKR 177
>gi|428308044|ref|YP_007144869.1| DNA-cytosine methyltransferase [Crinalium epipsammum PCC 9333]
gi|428249579|gb|AFZ15359.1| DNA-cytosine methyltransferase [Crinalium epipsammum PCC 9333]
Length = 395
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Query: 400 NCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVI 459
N E +K N F + + L G+VD++ G PPCQG S ++N P RN +
Sbjct: 43 NISENVKCVDLNTFDVRTI-LDGNVDIVVGSPPCQGFSN-EGYKNEKDP----RNSLVWK 96
Query: 460 FMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHM-KYQARFGIIAAGCYGLPQF 518
F D +E L PK + ENV K + RL M YQ + I+ + YG+PQ
Sbjct: 97 FFDFIEILTPKVWIFENVPGFKTSYKGIYFKQLQQRLELMPAYQWNYFILNSSDYGVPQK 156
Query: 519 RLR 521
R R
Sbjct: 157 RSR 159
>gi|334116652|ref|ZP_08490744.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
gi|333461472|gb|EGK90077.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
Length = 397
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
+V V+ GGPPCQG S + R+ + P RNR F+ +V ++P YV+MENV IL
Sbjct: 127 EVHVVVGGPPCQGFSVAGK-RDPNDP----RNRLFREFVRVVSEIRPWYVVMENVPGILT 181
Query: 483 FDKASLGRYALSRLVHMKY-QARFGIIAAGCYGLPQFRLR 521
K ++ + + Y ++ + YG+PQ R R
Sbjct: 182 IQKGAVKQAICEAFREIGYPHMSVAVLESATYGVPQIRPR 221
>gi|448332896|ref|ZP_21522116.1| DNA-cytosine methyltransferase [Natrinema pellirubrum DSM 15624]
gi|445624740|gb|ELY78115.1| DNA-cytosine methyltransferase [Natrinema pellirubrum DSM 15624]
Length = 477
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 14/114 (12%)
Query: 422 GDVDVICGGPPCQGIS--GYNRFRNVD---SPLDDERNRQIVIFMDIVEFLKPKYVLMEN 476
G+ D++ GGPPCQ +S GY D S LDDER ++DI+ L+PK ++MEN
Sbjct: 114 GEPDLVVGGPPCQSLSLAGYRSRLAADDDYSTLDDERTSLYEEYLDIIRELQPKALVMEN 173
Query: 477 VVDILK---------FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
V I+ D+ G ++ Y+ +F ++ GLPQ R R
Sbjct: 174 VEGIMTEVGDTGVRVIDRVLEGFEDIAATSEYGYEIQFDLVDLSKLGLPQSRDR 227
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 201 HKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNE 260
+ L +DL++G GG S GL + + +WA+D ++ A + +LNHPE RN
Sbjct: 42 EQTNLTAIDLFAGAGGFSCGL------AHSGFDMQWAIDFNEYATATYRLNHPEIPHRNI 95
Query: 261 AAEDFLE 267
D E
Sbjct: 96 VCSDIRE 102
>gi|46580156|ref|YP_010964.1| C-5 cytosine-specific DNA methylase [Desulfovibrio vulgaris str.
Hildenborough]
gi|387153409|ref|YP_005702345.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1]
gi|46449573|gb|AAS96223.1| C-5 cytosine-specific DNA methylase family protein [Desulfovibrio
vulgaris str. Hildenborough]
gi|311233853|gb|ADP86707.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1]
Length = 369
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 12/106 (11%)
Query: 421 PGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI 480
PG VD+I GGPPCQG S + R + +DD RN ++ + + V+ ++P+Y L+ENV +
Sbjct: 83 PGGVDIIMGGPPCQGFSTH---RIKGAGIDDPRNTLLLRYFEYVQAIRPRYFLVENVPGL 139
Query: 481 LKFDKASLGRYALSRLVHMKYQARF-----GIIAAGCYGLPQFRLR 521
L L R + +A + ++ A YG+PQ R R
Sbjct: 140 LWPRHEEY----LQRFYKLATEAGYHVSPPQVLNARDYGVPQNRKR 181
>gi|24527986|emb|CAD33713.1| putative DNA methylase [Escherichia coli]
Length = 310
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 425 DVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFD 484
DV+ GG PCQG S N R + P RN+ + + I+ +P Y + ENV IL D
Sbjct: 63 DVVVGGFPCQGFSVANMNRKSEDP----RNKLYLEMVRIIRDKRPAYFIAENVKGILSLD 118
Query: 485 KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K + + S + Y ++ ++ YG+PQ R+R
Sbjct: 119 KGLVIQKITSDFESLGYNVKYSLLNCADYGVPQTRMR 155
>gi|332158207|ref|YP_004423486.1| modification methylase [Pyrococcus sp. NA2]
gi|331033670|gb|AEC51482.1| modification methylase [Pyrococcus sp. NA2]
Length = 310
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLD----DERNRQIVIFMDIVEFLKPKYVLMENVVD 479
VDVI GGPPC+ + N R ++ P D D R ++ F+ V LKPK+ +MENV
Sbjct: 73 VDVIIGGPPCEPFTAINP-RRMEDPRDRLYKDPIGRLVLEFVRFVRELKPKFFVMENVPQ 131
Query: 480 ILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
IL+ +K Y Y F ++ + YG+PQ R R
Sbjct: 132 ILEVEK-----YIRREFERAGYDVYFNVLNSLDYGVPQIRRR 168
>gi|290891561|ref|ZP_06554618.1| hypothetical protein AWRIB429_2008 [Oenococcus oeni AWRIB429]
gi|290478814|gb|EFD87481.1| hypothetical protein AWRIB429_2008 [Oenococcus oeni AWRIB429]
Length = 382
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 420 LPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
L G V++ICGG PCQ S + + LD+ R E +KP+ + +ENV
Sbjct: 64 LRGTVELICGGFPCQAFSIAGKRKGF---LDETRGTLFFEIARAAEQIKPRTLFLENVRG 120
Query: 480 ILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L DK R +S L + Y A + I+ + +G+PQ R R
Sbjct: 121 LLSHDKGRTFRTIISTLDELGYDAEWQILNSKNFGVPQNRER 162
>gi|346973695|gb|EGY17147.1| modification methylase AgeI [Verticillium dahliae VdLs.17]
Length = 1411
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQ--IVIFMDIVEFLKPKYVLME 475
+P G+VD + GG PC G S VD ++R Q + F ++ +PKY L+E
Sbjct: 857 VPAVGEVDFVSGGSPCPGFSRLT----VDKTTPNQRKNQSLVAAFASFIDMYRPKYGLLE 912
Query: 476 NVVDILKFDKA---SLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
NVV+I++ K + + +V M YQ F ++ A +G PQ R R
Sbjct: 913 NVVEIIQGRKTREEDVFCQLICAIVGMGYQTHFFLLDAWTFGSPQSRSR 961
>gi|300702384|ref|YP_003743984.1| cytosine-specific methyltransferase [Ralstonia solanacearum
CFBP2957]
gi|299070045|emb|CBJ41330.1| putative cytosine-specific methyltransferase [Ralstonia
solanacearum CFBP2957]
Length = 438
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 55/114 (48%), Gaps = 19/114 (16%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI- 480
G +D+I GGPPCQG S R D RN+ ++ +VE L+P+++++ENV
Sbjct: 85 GAIDLIVGGPPCQGFSTAGRRDPADP-----RNQMTEQYLVLVEKLQPRFLVIENVAGFN 139
Query: 481 LKFDKA-------------SLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++FD S Y RL + Y G++ +G+PQ RLR
Sbjct: 140 MRFDDEENLDKLLKDPKHDSYADYVAGRLEDLGYSVFRGLVNCSDFGVPQNRLR 193
>gi|119513855|ref|ZP_01632813.1| DNA methylase, C-5 cytosine-specific family protein [Nodularia
spumigena CCY9414]
gi|119461493|gb|EAW42572.1| DNA methylase, C-5 cytosine-specific family protein [Nodularia
spumigena CCY9414]
Length = 318
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSP---LDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
++ V+ GGPPCQG S RN + L+D RN+ F++ VE +P Y ++ENV +
Sbjct: 72 ELTVLIGGPPCQGFS-----RNTPAGYRYLNDSRNQLYRTFLEFVEEFRPLYAVIENVPE 126
Query: 480 ILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
ILK + +L + Y+ + A YG+PQ R R
Sbjct: 127 ILKAYNGVVREEITKQLESLGYKVISSSLNAAHYGIPQTRSR 168
>gi|110643909|ref|YP_671639.1| type II 5-cytosoine methyltransferase [Escherichia coli 536]
gi|110345501|gb|ABG71738.1| putative type II 5-cytosoine methyltransferase [Escherichia coli
536]
Length = 305
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 425 DVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFD 484
DV+ GG PCQG S N R + P RN+ + + I+ +P Y + ENV IL D
Sbjct: 58 DVVVGGFPCQGFSVANMNRKSEDP----RNKLYLEMVRIIRDKRPAYFIAENVKGILSLD 113
Query: 485 KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K + + S + Y ++ ++ YG+PQ R+R
Sbjct: 114 KGLVIQKITSDFESLGYNVKYSLLNCADYGVPQTRMR 150
>gi|119493084|ref|ZP_01624009.1| C-5 cytosine-specific DNA methylase [Lyngbya sp. PCC 8106]
gi|119452829|gb|EAW34004.1| C-5 cytosine-specific DNA methylase [Lyngbya sp. PCC 8106]
Length = 441
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
D+DV+ GGPPCQG S + L+D RN + F+ IV LKPK+ + ENV +
Sbjct: 83 DIDVVFGGPPCQGFSLMGK-----RLLEDPRNLLVFHFVRIVAELKPKFFVFENVKGMAS 137
Query: 483 FDKASLGRYALSRLVHMKYQAR--FGIIAAGCYGLPQFRLR 521
+ + +++ + YQ + + ++ A YG+PQ R R
Sbjct: 138 GKHQNFIQELINKFEYYGYQVQQPYQVLNAAYYGVPQKRER 178
>gi|359425654|ref|ZP_09216750.1| putative cytosine-specific methyltransferase [Gordonia amarae NBRC
15530]
gi|358239145|dbj|GAB06332.1| putative cytosine-specific methyltransferase [Gordonia amarae NBRC
15530]
Length = 395
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
DVDV+ GGPPCQG S NR + + RN ++ VE PKY ++ENV LK
Sbjct: 98 DVDVVIGGPPCQGFSTLNR-----AGVGAHRNELWRLYAQTVEKATPKYFVLENVPAFLK 152
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
D+ + + L + Y I+ A YG Q R R
Sbjct: 153 SDQWIVFQTELQEGMLKDYSIDVDILNAADYGAVQARKR 191
>gi|152994008|ref|YP_001359729.1| cytosine-specific methyltransferase [Sulfurovum sp. NBC37-1]
gi|151425869|dbj|BAF73372.1| cytosine-specific methyltransferase [Sulfurovum sp. NBC37-1]
Length = 362
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 426 VICGGPPCQGISGYN-RFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFD 484
++ GGPPCQG S N + RN+D+P N + VE LKP + + ENVV FD
Sbjct: 71 LLFGGPPCQGFSVANTKTRNLDNP----NNWMFREYCRFVEDLKPDWFVFENVVGFKSFD 126
Query: 485 KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K L + Y+ ++ A +G+PQ+R R
Sbjct: 127 KGRFAVEVEKELKSLGYKTNSSVLNAADFGVPQYRNR 163
>gi|212694208|ref|ZP_03302336.1| hypothetical protein BACDOR_03734 [Bacteroides dorei DSM 17855]
gi|212663274|gb|EEB23848.1| DNA (cytosine-5-)-methyltransferase [Bacteroides dorei DSM 17855]
Length = 370
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 425 DVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFD 484
D++ GGPPCQG S + +DD+R++ I + ++EF +P+ +MENV +
Sbjct: 76 DLVIGGPPCQGFSVAGKMD-----VDDKRSQLIWSYAKVIEFTRPRAFIMENVKALGTLK 130
Query: 485 KASLGRYA-LSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K R A L +L + Y F ++ A Y +PQ R R
Sbjct: 131 KWEKIREALLEKLRSLGYSVNFMVLNATDYNVPQARER 168
>gi|255280633|ref|ZP_05345188.1| modification methylase DdeI [Bryantella formatexigens DSM 14469]
gi|255269098|gb|EET62303.1| DNA (cytosine-5-)-methyltransferase [Marvinbryantia formatexigens
DSM 14469]
Length = 378
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
++DVI GGPPCQG S + + DD RN ++ I ++P+ + ENV I+
Sbjct: 70 AEIDVITGGPPCQGFSLAGQRLS-----DDPRNTLFREYVRIAADIRPRVLFFENVHGIM 124
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + ++ + YQ ++ ++ A YG+PQ R R
Sbjct: 125 NMQNGRVLKAIVTEFEKIGYQCKYNLVNAADYGVPQARPR 164
>gi|283956744|ref|ZP_06374220.1| hypothetical protein C1336_000290019 [Campylobacter jejuni subsp.
jejuni 1336]
gi|283791719|gb|EFC30512.1| hypothetical protein C1336_000290019 [Campylobacter jejuni subsp.
jejuni 1336]
Length = 330
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
+ +VI GGPPCQG S + + L D+RN+ + ++ ++ +KPK +MENV + +
Sbjct: 72 NFEVIIGGPPCQGFSLAGKIGRKE--LQDDRNKLFLAYLKFIKNIKPKIFIMENVASLAR 129
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+K + L ++ Y+ ++ I+ Y + Q R R
Sbjct: 130 HNKGQTLKEILQCFYNINYEVKYEILNTKDYSIAQNRSR 168
>gi|428219918|ref|YP_007083390.1| DNA-cytosine methyltransferase [Pseudanabaena sp. PCC 7367]
gi|427992261|gb|AFY71954.1| DNA-cytosine methyltransferase [Pseudanabaena sp. PCC 7367]
Length = 409
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
+D++ GPPCQ S + LDD R + + ++ +E ++PK VL+ENV +
Sbjct: 68 QIDLLSAGPPCQSFS----YAGNQRGLDDRRGQLVYETLNTIEQVQPKMVLIENVKHLST 123
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + L RL ++Y+ ++ I+ A YG+ Q R R
Sbjct: 124 INSGKVLKAILGRLHSLRYRTQWQILNANDYGVAQNRQR 162
>gi|386284381|ref|ZP_10061603.1| two-component sensor [Sulfurovum sp. AR]
gi|385344666|gb|EIF51380.1| two-component sensor [Sulfurovum sp. AR]
Length = 492
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
D+DVI GGPPCQ S N+ R +D P RN ++ VE ++PK+VLMENV ++K
Sbjct: 184 DIDVIIGGPPCQSFSSANQQRVIDDP----RNVLYTYYVKAVEKIQPKFVLMENVRGMIK 239
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + Y + + + + + Q R+R
Sbjct: 240 -----VADQVVEDFNRIGYDVEYRLFDSSEFSVAQKRVR 273
>gi|79835453|gb|ABB52085.1| Mod [Arthrospira platensis]
gi|291569776|dbj|BAI92048.1| type II DNA modification methyltransferase [Arthrospira platensis
NIES-39]
Length = 429
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 371 SGKRGLNFKVHWKGY----STSEDSWEPIEGLRNCPER--IKEFVRNGFKSKILPLPGDV 424
+G G + W G + D W N P IK ++ +IL G++
Sbjct: 47 AGAGGFSLGFQWAGAHIIGAIEIDEWAGETFQFNHPNAHLIKGDIKGITDEQILDTFGEI 106
Query: 425 D--VICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
+I GG PCQG S N+ + D RN + I L+P+ +++ENV +++K
Sbjct: 107 KPHIILGGIPCQGFSICNQNK---GDRQDSRNYMFQDLIRISSLLQPEIIIIENVPNLIK 163
Query: 483 F---DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ + +S+L H+ YQ + I+ A YG+PQ R R
Sbjct: 164 AKTTNRQLVIDLIMSKLRHLGYQVNYQILNATDYGIPQVRKR 205
>gi|390456269|ref|ZP_10241797.1| cytosine-specific methyltransferase [Paenibacillus peoriae KCTC
3763]
Length = 379
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 409 VRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLK 468
+RN F L D+I GGPPCQG S + +DER+ I ++D+V +K
Sbjct: 55 IRNAFNE--LEAYKGTDIIFGGPPCQGFSVAGKMDP-----NDERSTLIWTYLDVVRIIK 107
Query: 469 PKYVLMENVVDILKFDKASLGRYALSRLVH-MKYQARFGIIAAGCYGLPQFRLR 521
PK ++ENV + K +K R + ++ + M Y ++ + YG+PQ R R
Sbjct: 108 PKAFVLENVSALAKLEKWKDVRTKMFQIANEMGYSCYPFLLNSSNYGVPQKRER 161
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 208 LDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQV-RNEAAEDFL 266
L L+SG GGM G K + N+V W+ + DK AC + + NHPE+ + R + F
Sbjct: 7 LSLFSGAGGMDVGF----KKAGVNIV--WSNELDKDACNTYEANHPESTLFRGDIRNAFN 60
Query: 267 EL 268
EL
Sbjct: 61 EL 62
>gi|423064852|ref|ZP_17053642.1| cytosine-specific DNA methylase [Arthrospira platensis C1]
gi|406714095|gb|EKD09263.1| cytosine-specific DNA methylase [Arthrospira platensis C1]
Length = 395
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
V ++ GGPPCQG S + R+ + P RN F+ IV ++P YV+MENV IL
Sbjct: 120 SVHLVVGGPPCQGFSVAGK-RDPNDP----RNHLFQQFIRIVAEVRPWYVVMENVPGILT 174
Query: 483 FDKASLGRYALSRLVHMKY-QARFGIIAAGCYGLPQFRLR 521
K + + S + Y I+ + YG+PQ R R
Sbjct: 175 LKKGKIKQAIFSAFQAIGYTNISVAILESAAYGVPQIRPR 214
>gi|30523050|gb|AAP31838.1| AsiSI methylase [Arthrobacter sp. S]
Length = 390
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+DV+ GGPPCQ S + LDD R I F+ IV+ ++PK V+ ENV +
Sbjct: 74 IDVLSGGPPCQPFSIAGKRLG----LDDPRGHLIAEFVRIVDEVRPKAVVFENVPALQTS 129
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ R L + Y R I+ A +G+PQ R R
Sbjct: 130 HNGDVVRATTDALEQLGYGVRRAILNAADWGVPQARKR 167
>gi|33322745|gb|AAQ07107.1|AF496419_1 cytosine-specific DNA methyltransferase [Lactobacillus delbrueckii
subsp. lactis]
Length = 138
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 18/125 (14%)
Query: 397 GLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQ 456
G+ N I ++V +VD++ GGPPCQG S NR R +D P RN+
Sbjct: 13 GIENXSSHINDYVNE-----------EVDMVXGGPPCQGFSEANRQRLIDDP----RNKL 57
Query: 457 IVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLP 516
+++ V L+PK +MENV +LK L + S Y + ++ A +G+P
Sbjct: 58 YKYYVESVTALQPKVFVMENVKGMLKVACQVLEDFNNSA---SHYDIYYKVLNARNFGVP 114
Query: 517 QFRLR 521
Q R R
Sbjct: 115 QNRER 119
>gi|376005611|ref|ZP_09783070.1| DNA (cytosine-5-)-methyltransferase [Arthrospira sp. PCC 8005]
gi|375326009|emb|CCE18823.1| DNA (cytosine-5-)-methyltransferase [Arthrospira sp. PCC 8005]
Length = 401
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
V ++ GGPPCQG S + R+ + P RN F+ IV ++P YV+MENV IL
Sbjct: 127 VHLVVGGPPCQGFSVAGK-RDPNDP----RNHLFQQFIRIVAEVRPWYVVMENVPGILTL 181
Query: 484 DKASLGRYALSRLVHMKY-QARFGIIAAGCYGLPQFRLR 521
K + + S + Y I+ + YG+PQ R R
Sbjct: 182 KKGKIKQAIFSAFQAIGYTNISVAILESAAYGVPQIRPR 220
>gi|449085227|gb|AGE84600.1| cytosine DNA methyltransferase [Helicobacter pylori]
Length = 352
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Query: 407 EFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
+ + K K++ L ++++I G PPCQG S N+ +N+ L D RN + +++IV
Sbjct: 53 DITQTDIKEKVIKLAKKLEINMIIGRPPCQGFS--NKGKNLG--LKDPRNF-FLEYIEIV 107
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+ ++ENV +I+ K RL + YQ + I+ A YG+PQ R R
Sbjct: 108 KAIKPEIFIIENVKNIISCAKGYFLEEIKERLNALGYQLSYQILNAKDYGVPQNRER 164
>gi|409991231|ref|ZP_11274511.1| site-specific DNA-methyltransferase [Arthrospira platensis str.
Paraca]
gi|409937907|gb|EKN79291.1| site-specific DNA-methyltransferase [Arthrospira platensis str.
Paraca]
Length = 388
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 371 SGKRGLNFKVHWKGY----STSEDSWEPIEGLRNCPER--IKEFVRNGFKSKILPLPGDV 424
+G G + W G + D W N P IK ++ +IL G++
Sbjct: 6 AGAGGFSLGFQWAGAHIIGAIEIDEWAGETFQFNHPNAHLIKGDIKGITDEQILDTFGEI 65
Query: 425 D--VICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
+I GG PCQG S N+ + D RN + I L+P+ +++ENV +++K
Sbjct: 66 KPHIILGGIPCQGFSICNQNK---GDRQDSRNYMFQDLIRISSLLQPEIIIIENVPNLIK 122
Query: 483 F---DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ + +S+L H+ YQ + I+ A YG+PQ R R
Sbjct: 123 AKTTNRQLVIDLIMSKLRHLGYQVNYQILNATDYGIPQVRKR 164
>gi|344942873|ref|ZP_08782160.1| DNA-cytosine methyltransferase [Methylobacter tundripaludum SV96]
gi|344260160|gb|EGW20432.1| DNA-cytosine methyltransferase [Methylobacter tundripaludum SV96]
Length = 359
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 425 DVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL--K 482
D++ GGPPCQG S + R D+ +DD RN+ I+ + + V LKPK LMENV IL +
Sbjct: 80 DIVLGGPPCQGFSVH---RIKDAGIDDPRNKLILRYFEYVAVLKPKVFLMENVPGILWSR 136
Query: 483 FDKASLGRYALSRLVHMKYQARFGI-IAAGCYGLPQFRLR 521
K YA + YQ + + A YGLPQ R R
Sbjct: 137 HKKFLDAFYAEGK--KAGYQLMQPVTLDARDYGLPQRRKR 174
>gi|424912865|ref|ZP_18336239.1| DNA-methyltransferase Dcm [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392844022|gb|EJA96545.1| DNA-methyltransferase Dcm [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 408
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 12/114 (10%)
Query: 415 SKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLM 474
S ++ L G +D+I GGPPCQG S R RN + P RN+ +++IV + P+++L+
Sbjct: 75 SFLVGLRGSIDLIAGGPPCQGFSFAGR-RNPNDP----RNKLTEEYIEIVSLVMPQFLLL 129
Query: 475 ENVVDILKFDKASLGRYAL-------SRLVHMKYQARFGIIAAGCYGLPQFRLR 521
ENV K S + A+ RL + Y+ ++ A +G+PQ R R
Sbjct: 130 ENVRGFTSAFKTSTEQQAIPYSEIVAGRLEDLGYKVFKKMLNASRFGVPQPRPR 183
>gi|299145238|ref|ZP_07038306.1| putative cytosine-specific methyltransferase protein [Bacteroides
sp. 3_1_23]
gi|298515729|gb|EFI39610.1| putative cytosine-specific methyltransferase protein [Bacteroides
sp. 3_1_23]
Length = 402
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 30/176 (17%)
Query: 371 SGKRGLNFKVH---WKGYSTSEDSWEPIEGLR-NCPERIKEF---------------VRN 411
+G GL+ +H W+G E + + + L N +++ F V
Sbjct: 11 AGCGGLSLGLHNAGWQGLFAVEKNADAFKTLEYNLIKKVNHFLWPDWFPKTSHDINVVLK 70
Query: 412 GFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKY 471
+K ++L L VD++ GGPPCQG S R + +D+RN + ++ ++ ++PK
Sbjct: 71 DYKEQLLGLQQKVDLVVGGPPCQGFSMAGRRKE-----NDQRNNLVKSYIKFIKTIQPKI 125
Query: 472 VLMENVVDI-LKFDK-----ASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ ENV L+F K Y L Y + ++ G YG+PQ R R
Sbjct: 126 IFFENVKGFTLEFKKNKDKGKEYSSYVERALNRAGYYVKGELVNFGEYGIPQKRTR 181
>gi|300124212|gb|ADJ68008.1| M.BanII [Aneurinibacillus aneurinilyticus]
Length = 385
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
++D+I GGPPCQG S + DDER+ + F+D+V+ ++P+ +MENV +
Sbjct: 68 NIDIIFGGPPCQGFSVAGKMNP-----DDERSTLVWSFLDVVKLVRPRAFVMENVKALAT 122
Query: 483 FDKASLGRYALSRLVH-MKYQARFGIIAAGCYGLPQFRLR 521
+K R + +L + M Y ++ + YG+PQ R R
Sbjct: 123 LEKWKNIRERIIKLSNDMGYSCYPYVLNSSHYGVPQKRER 162
>gi|374704182|ref|ZP_09711052.1| cytosine-specific methyltransferase [Pseudomonas sp. S9]
Length = 449
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 22/119 (18%)
Query: 422 GDVDVICGGPPCQGISGYNR-----------FRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
G++D + GGPPCQG S R F D RN ++ ++++ E LKPK
Sbjct: 82 GELDCMIGGPPCQGFSQLRRSEQLNKGKIVKFSGYSQLAHDPRNDLVLRYLEVAEALKPK 141
Query: 471 YVLMENVVDILK--FDKASLGRYALSRLV------HMKYQARFGIIAAGCYGLPQFRLR 521
++++ENV +L FD LG+ LS V + Y I+ YG+PQ R R
Sbjct: 142 FLVIENVPQMLNHGFD-GRLGK--LSETVINILERDLGYNVEVAILNCADYGVPQLRER 197
>gi|20530828|gb|AAM27270.1|AF507962_1 methyl transferase [Lactococcus lactis]
Length = 185
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 420 LPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
L G V++ICGG PCQ S + + LD+ R E +KP+ + +ENV
Sbjct: 64 LRGTVELICGGFPCQSFSIAGKRKGF---LDETRGTLFFEIARAAEQIKPRTLFLENVRG 120
Query: 480 ILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L DK R +S L + Y A + I+ + +G+PQ R R
Sbjct: 121 LLSHDKGRTFRTIISTLNELGYDAEWQILNSKNFGVPQNRER 162
>gi|46138503|ref|XP_390942.1| hypothetical protein FG10766.1 [Gibberella zeae PH-1]
Length = 1343
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 405 IKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIV-IFMDI 463
++ F G ++ +P GDVD I GG PC G++ N + + +N+ +V F
Sbjct: 867 MQRFAIQGKFAENVPPVGDVDFISGGSPC---PGFSLLTNDKTTVAQRKNQSLVAAFGSF 923
Query: 464 VEFLKPKYVLMENVVDILKFDKASLGRYALSRL----VHMKYQARFGIIAAGCYGLPQFR 519
++ +P+Y L+ENV I++ KA+ + S+L V + YQ +F + A G PQ R
Sbjct: 924 IDLYRPRYGLLENVPGIIQ-SKATRDQDVFSQLICAIVGLGYQTQFSFLDASSCGSPQRR 982
Query: 520 LR 521
R
Sbjct: 983 SR 984
>gi|448382790|ref|ZP_21562285.1| modification methylase XorII [Haloterrigena thermotolerans DSM
11522]
gi|445661259|gb|ELZ14050.1| modification methylase XorII [Haloterrigena thermotolerans DSM
11522]
Length = 361
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
+VD++ GGPPCQG S + DDERN ++ + + + L P Y +MENV ++
Sbjct: 73 EVDIVTGGPPCQGFSVMGKRDP-----DDERNNLLLKYAEHISGLSPDYFVMENVKGLMS 127
Query: 483 FDKASLGRYALSRLVHMKYQ--ARFGIIAAGCYGLPQFRLR 521
DK L+ + Y ++ A +G+PQ+R R
Sbjct: 128 GDKREFLEEFLNEIRSAGYNIVEPIQVLDAAEFGVPQYRER 168
>gi|352094116|ref|ZP_08955287.1| DNA-cytosine methyltransferase [Synechococcus sp. WH 8016]
gi|351680456|gb|EHA63588.1| DNA-cytosine methyltransferase [Synechococcus sp. WH 8016]
Length = 680
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVD-------SPLDDERNRQIVIFMDIVEFLKPKYVLM 474
G+V ++ GGPPCQ S R+R D L++ R F+ +VE + P+ LM
Sbjct: 114 GEVALVAGGPPCQPFSRNIRWRKHDDDVIEQHKELNEGRRELWESFLTVVEGVMPRAFLM 173
Query: 475 ENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
ENV DI + + R +SR Y+ ++ A +G+PQ R R
Sbjct: 174 ENVPDIAQTGDQEVFRGIVSRAEAAGYRVHARLVHAWEHGVPQLRPR 220
>gi|308275289|emb|CBX31885.1| hypothetical protein N47_O13040 [uncultured Desulfobacterium sp.]
Length = 423
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL-- 481
VD+I GGPPCQ S R R+ + D+RN V + + + KPKY L ENV+ +L
Sbjct: 115 VDLIIGGPPCQAYSLAGRARDKNGMKGDKRNYLYVYYAEFLRRYKPKYFLFENVMGLLSA 174
Query: 482 KFDKASLGRYALSRLVHMK-YQARFGIIAAGCYGLPQFRLR 521
K + +L + +L + Y+ II+A YG+ Q R R
Sbjct: 175 KDENCALYLSTMKKLFKEQGYETAEKIISANDYGVLQKRKR 215
>gi|399088671|ref|ZP_10753609.1| DNA-methyltransferase Dcm [Caulobacter sp. AP07]
gi|398030459|gb|EJL23871.1| DNA-methyltransferase Dcm [Caulobacter sp. AP07]
Length = 498
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 420 LPGDVDVICGGPPCQGIS--GYNRFRNV-DSPLD---DERNRQIVIFMDIVEFLKPKYVL 473
L VDV+ GGPPCQ + G + R V D P D R + ++ V +P +L
Sbjct: 103 LENSVDVLVGGPPCQAYARVGRAKLREVADHPQAFKVDPRGNLYLRYLTYVRAFRPLALL 162
Query: 474 MENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV DIL + ++ + L + Y A + +I A +G+PQ R R
Sbjct: 163 IENVPDILHYAHHNVAEEIVEALEALGYVANYSLINAAFHGVPQMRDR 210
>gi|30089875|ref|NP_839905.1| putative methylase [Lactococcus phage P335 sensu lato]
gi|21954664|gb|AAM83053.1|AF489521_14 putative methylase [Lactococcus phage 4268]
Length = 185
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Query: 420 LPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
L G V++ICGG PCQ S + + LD+ R E +KP+ + +ENV
Sbjct: 64 LRGTVELICGGFPCQAFSIAGKRKGF---LDETRGTLFFEIARAAEQIKPRTLFLENVRG 120
Query: 480 ILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L DK R +S L + Y A + I+ + +G+PQ R R
Sbjct: 121 LLSHDKGRTFRTIISTLDELGYDAEWQILNSKNFGVPQNRER 162
>gi|409910991|ref|YP_006889456.1| DNA cytosine methyltransferase [Geobacter sulfurreducens KN400]
gi|298504551|gb|ADI83274.1| DNA cytosine methyltransferase [Geobacter sulfurreducens KN400]
Length = 428
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
DV+ GGPPCQG S N+FRN D R + FM++V+ +MENV +L+
Sbjct: 102 ADVVIGGPPCQGFSLLNKFRN-----GDPRKQLWRPFMEVVKRSGASVFVMENVPQLLE- 155
Query: 484 DKASLGRYALSRLVH-MKYQARFGIIAAGCYGLPQFRLR 521
S + + H M +Q R + A YG+PQ R R
Sbjct: 156 ---SHEYVEIKHVAHEMGFQIRKAKLCAADYGVPQIRWR 191
>gi|409422062|ref|ZP_11259177.1| modification methylase XorII [Pseudomonas sp. HYS]
Length = 428
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
D+DV+ GG PCQG S + LDD RN+ + ++ IV LKPKY + ENV +
Sbjct: 80 DIDVVFGGAPCQGFSMIGK-----RALDDSRNQLVFHYVRIVAELKPKYCVFENVKGLTL 134
Query: 483 FDKASLGRYALSRLVHMKYQAR--FGIIAAGCYGLPQFRLR 521
A + ++ L Y + ++ A YG+PQ R R
Sbjct: 135 GKHAEFLKELIAALGEAGYDVTLPYRVLNAADYGVPQDRKR 175
>gi|444912168|ref|ZP_21232333.1| DNA-cytosine methyltransferase [Cystobacter fuscus DSM 2262]
gi|444717076|gb|ELW57911.1| DNA-cytosine methyltransferase [Cystobacter fuscus DSM 2262]
Length = 522
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 424 VDVICGGPPCQGIS--GYNRFRNV----DSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
+D+I GGPPC + G + R V ++ DER + ++ V LKP ++MENV
Sbjct: 110 IDLIVGGPPCPAFTRVGRAKLREVYNHPEAFKHDERATLYIEYLKYVRELKPVALVMENV 169
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
DIL + ++G L + Y+ + ++ A YG+PQ R R
Sbjct: 170 PDILNWGGHNVGDEICKSLDELGYRCAYTLLNAANYGVPQMRER 213
>gi|169834211|ref|YP_001693507.1| hypothetical protein SPH_0083 [Streptococcus pneumoniae
Hungary19A-6]
gi|168996713|gb|ACA37325.1| hypothetical protein SPH_0083 [Streptococcus pneumoniae
Hungary19A-6]
Length = 255
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEF---LKPKYVLMENVV 478
G VDVICGG PCQ S R +D R +F +I F LKP+Y+ +ENV
Sbjct: 65 GHVDVICGGFPCQAFSIAGNRRG----FEDTRG---TLFFEIARFASILKPRYLFLENVK 117
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L D+ + LS L + Y + ++ + +G+PQ R R
Sbjct: 118 GLLNHDRGNTFEVILSALDELGYDVEWQVLNSKDFGVPQNRER 160
>gi|425441645|ref|ZP_18821915.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9717]
gi|389717574|emb|CCH98349.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9717]
Length = 381
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSP---LDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
++ + GGPPCQG S RN+ + L+D RN F+ V+ +P +V+MENV +
Sbjct: 72 ELTALIGGPPCQGFS-----RNIPAGYRYLNDSRNHLYKSFLGFVQEFRPLHVVMENVPE 126
Query: 480 ILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
ILK + ++ L YQ + A YG+PQ R R
Sbjct: 127 ILKAYNGIIRDEIVAHLESWGYQVVTTSLNAAYYGVPQTRSR 168
>gi|418967793|ref|ZP_13519431.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis SK616]
gi|383342252|gb|EID20480.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis SK616]
Length = 393
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 416 KILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLME 475
++ L G VD++ GGPPCQG S + +N DD RN+ + +++ ++ ++P + E
Sbjct: 72 ELATLNGSVDLVVGGPPCQGFSMAGKRKN-----DDIRNQLMHSYIEFIKLVQPTMLFFE 126
Query: 476 NVVDIL-----KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
NV DK +S L + Y + I+ YG+PQ R R
Sbjct: 127 NVQGFTVGFKDHKDKQKYSDILVSELRELGYNLDYKIVTMSEYGVPQNRKR 177
>gi|417924522|ref|ZP_12567961.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis SK569]
gi|342835741|gb|EGU69971.1| DNA (cytosine-5-)-methyltransferase [Streptococcus mitis SK569]
Length = 337
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 420 LPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
L G VD++ GGPPCQG S + +N DD RN+ + +++ ++ ++P + ENV
Sbjct: 20 LNGSVDLVVGGPPCQGFSMAGKRKN-----DDIRNQLMHSYIEFIKLVQPTMLFFENVQG 74
Query: 480 IL-----KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
DK +S L + Y + I+ YG+PQ R R
Sbjct: 75 FTVGFKDHKDKQKYSDILVSELRELGYNLDYKIVTMSEYGVPQNRKR 121
>gi|240142441|ref|YP_002966951.1| Site-specific DNA-methyltransferase [Methylobacterium extorquens
AM1]
gi|240012385|gb|ACS43610.1| Site-specific DNA-methyltransferase [Methylobacterium extorquens
AM1]
Length = 463
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 426 VICGGPPCQGIS--GYNRFRNV----DSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
V+ GGPPCQ + G + R+V ++ LDD R ++ VE ++P V MENV+D
Sbjct: 80 VLVGGPPCQAYARVGRAKLRSVAARQNAHLDDPRVLLFRHWLRFVEAIRPHAVAMENVLD 139
Query: 480 ILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L ++ LV + Y R+ I+ A YG+PQ R R
Sbjct: 140 CLSVGGRNVMEETAEALVSLGYVPRYTIMNAVHYGVPQMRDR 181
>gi|18202059|sp|O52702.1|MTA1_ACEPA RecName: Full=Modification methylase ApaLI; Short=M.ApaLI; AltName:
Full=Cytosine-specific methyltransferase ApaLI
gi|2865599|gb|AAC97180.1| ApaLI methyltransferase [Acetobacter pasteurianus]
Length = 429
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 426 VICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDK 485
V+ GGPPCQG S RN D RN I +++IVE L P++++ ENV +L
Sbjct: 74 VVIGGPPCQGFSTAGP-RN----FADPRNLLIFNYLNIVERLSPRWLIFENVEGLL---- 124
Query: 486 ASLGRYALSRLVH----MKYQARFGIIAAGCYGLPQFRLR 521
S G L+RLV M Y R + YG+PQ R R
Sbjct: 125 TSGGGRDLARLVREFVDMGYSVRLQKVNLAAYGVPQTRKR 164
>gi|303328045|ref|ZP_07358484.1| modification methylase MspI [Desulfovibrio sp. 3_1_syn3]
gi|302861871|gb|EFL84806.1| modification methylase MspI [Desulfovibrio sp. 3_1_syn3]
Length = 417
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 425 DVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFD 484
DV+C G PCQ S + + P + R I + IVEF P+Y+L+ENV I+
Sbjct: 68 DVLCAGFPCQPFSSAGKKQGAKCP---KSGRLINEVLRIVEFHHPEYILLENVPQIITIQ 124
Query: 485 KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ S L + Y + I + +G+PQ R R
Sbjct: 125 NGEFWKHVNSSLARLGYHVTYKIYSPKQFGIPQNRER 161
>gi|172038906|ref|YP_001805407.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142]
gi|354552802|ref|ZP_08972110.1| DNA-cytosine methyltransferase [Cyanothece sp. ATCC 51472]
gi|171700360|gb|ACB53341.1| C-5 cytosine-specific DNA methylase [Cyanothece sp. ATCC 51142]
gi|353556124|gb|EHC25512.1| DNA-cytosine methyltransferase [Cyanothece sp. ATCC 51472]
Length = 427
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+DV+ GGPPCQG S + L+D+RN + F+ +V L+PKY +MENV +
Sbjct: 76 IDVVFGGPPCQGFSLMGK-----RCLEDDRNSLVKHFLRLVVELQPKYFVMENVRGMAIG 130
Query: 484 DKASLGRYALSRLVHMKY--QARFGIIAAGCYGLPQFRLR 521
L V Y Q + + A YG+PQ R R
Sbjct: 131 KHQILLEEIFDEFVKNNYRVQTEYKFLNAANYGVPQLRER 170
>gi|426200066|gb|EKV49990.1| hypothetical protein AGABI2DRAFT_115056 [Agaricus bisporus var.
bisporus H97]
Length = 1378
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 20/119 (16%)
Query: 419 PLP--GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMEN 476
P+P G+VD I GGPPCQ SG N R DD R+ + +E Y L+EN
Sbjct: 945 PMPNRGEVDFIFGGPPCQSFSGANHHRQA----DDIRSTMPCNMLSFLEHYDADYFLLEN 1000
Query: 477 VVDILKFD--------------KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
V + + K+ + + + LV + Q ++ ++ AG YG PQ R R
Sbjct: 1001 VRGLANYPLLSEQKGRILSGGVKSGMVKLIMQCLVALGRQVQWKVLQAGQYGAPQNRER 1059
>gi|310819714|ref|YP_003952072.1| cytosine-specific methyltransferase [Stigmatella aurantiaca
DW4/3-1]
gi|309392786|gb|ADO70245.1| Cytosine-specific methyltransferase [Stigmatella aurantiaca
DW4/3-1]
Length = 421
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDS-PLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI 480
G+ DV+ GGPPCQ S + D+ L D R + ++ ++E KP+ +L+ENV +
Sbjct: 72 GEADVLIGGPPCQPFSKAGYWARGDALRLSDPRAATLAAYLRMLEETKPRALLLENVEGL 131
Query: 481 LKFDKASLGRYALSRL------VHMKYQARFGIIAAGCYGLPQFRLR 521
K R L + + KY+ F ++ A YG+PQ R R
Sbjct: 132 AYRGKDEGLRLILDEIEAINGRIGTKYRPVFQVVNAASYGVPQLRKR 178
>gi|357458739|ref|XP_003599650.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|357491291|ref|XP_003615933.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355488698|gb|AES69901.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355517268|gb|AES98891.1| Cytosine-specific methyltransferase [Medicago truncatula]
Length = 145
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 75/183 (40%), Gaps = 54/183 (29%)
Query: 64 EGTQKHIGKILEFFKTTDGEEYFRVQWFYRAEDTVMKEAADFHDRKRLFYSTVMNDNPVD 123
+G + +I KI+E F++ DGE +FR Y + M ++ D LF+ D
Sbjct: 13 KGGESYICKIIEMFESVDGELFFRA---YICKIIEMFKSVD----GELFFRAQWQYRAKD 65
Query: 124 CIISKVIVAQIPPKIGLKSNSIPSSDFYFDMEYCVEYSTFRTLLTGKIHDLSLPSCTETV 183
I +K I+++I S +
Sbjct: 66 TIKNKDILSEIS------------------------------------------STVSSH 83
Query: 184 PTTATSTFFE-NMPNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDK 242
P +F NM N K EL LLDLYSGCGGMST LC G LS + + RWA++ ++
Sbjct: 84 PKVNGKSFMNTNMVN--TKKPELKLLDLYSGCGGMSTDLCQGGLLSSSKM--RWAVNMNE 139
Query: 243 SAC 245
C
Sbjct: 140 HEC 142
>gi|145218883|ref|YP_001129592.1| DNA-cytosine methyltransferase [Chlorobium phaeovibrioides DSM 265]
gi|145205047|gb|ABP36090.1| DNA-cytosine methyltransferase [Chlorobium phaeovibrioides DSM 265]
Length = 377
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 50/117 (42%), Gaps = 13/117 (11%)
Query: 407 EFVRNGFKSKILPLPGDVDVICGGPPCQGIS--GYNRFRNVDSPLDDERNRQIVIFMDIV 464
+F R K+ I DV ++ GGPPCQG S G R DERN ++ V
Sbjct: 60 DFARESLKTGIT----DVTLVSGGPPCQGFSTVGSKNRR-------DERNSLFYEYLRAV 108
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L P YV+ ENV K + L M Y I+ A YGLPQ R R
Sbjct: 109 AELNPLYVIFENVSGFKKMYDGEAYLALTTELRSMGYDLASSILEASDYGLPQRRQR 165
>gi|409082235|gb|EKM82593.1| hypothetical protein AGABI1DRAFT_125058 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1360
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 20/119 (16%)
Query: 419 PLP--GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMEN 476
P+P G+VD I GGPPCQ SG N R DD R+ + +E Y L+EN
Sbjct: 945 PMPNRGEVDFIFGGPPCQSFSGANHHRQA----DDIRSTMPCNMLSFLEHYDADYFLLEN 1000
Query: 477 VVDILKFD--------------KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
V + + K+ + + + LV + Q ++ ++ AG YG PQ R R
Sbjct: 1001 VRGLANYPLLSEQKGRILSGGVKSGMVKLIMQCLVALGRQVQWKVLQAGQYGAPQNRER 1059
>gi|402080297|gb|EJT75442.1| modification methylase DdeI [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1216
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 7/108 (6%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVI-FMDIVEFLKPKYVLMEN 476
+P G+V+ I GG PCQG S ++ ++ ++NR +V F V+F +PKY ++EN
Sbjct: 761 VPAKGEVEFISGGSPCQGFSLLTANKSSEA---QKKNRSLVASFASFVDFYRPKYGILEN 817
Query: 477 VVDIL-KFDKASLGRYA--LSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
V ++ K D ++ L +V M YQ + + A YG PQ R R
Sbjct: 818 VSSMVGKSDNPGSDYFSQLLCAIVGMGYQIQIILGDAWTYGAPQSRSR 865
>gi|322708438|gb|EFZ00016.1| DNA (cytosine-5)-methyltransferase, putative [Metarhizium
anisopliae ARSEF 23]
Length = 1166
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 405 IKEFVRNGFK---SKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIV-IF 460
I +F R F SK +P G VD I GG PC G S R D + +N+ +V F
Sbjct: 737 IDDFQREAFSGNFSKSVPTIGSVDFISGGSPCPGFSTLTNDRTTD---EQRKNQSLVAAF 793
Query: 461 MDIVEFLKPKYVLMENVVDIL----KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLP 516
V+ +PKY L+ENV IL ++ LG++ + +V + YQA+ + A G
Sbjct: 794 ASCVDLYRPKYGLLENVPGILPSKANREQDVLGQF-MCAIVGIGYQAQVFYLDASSCGSA 852
Query: 517 QFRLR 521
Q R R
Sbjct: 853 QRRSR 857
>gi|334119885|ref|ZP_08493969.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
gi|333457526|gb|EGK86149.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
Length = 394
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
++D+I GG PCQG S + + D RN F D+V ++P YV++ENV +L
Sbjct: 78 AEIDIITGGAPCQGFSTVGK-----REITDPRNSLWRNFRDLVAEIRPAYVIIENVEGML 132
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ ++ + Y + ++ A YG+PQ R R
Sbjct: 133 VMQGGKVRDSVIASFADIGYHMKCRLLKAADYGVPQLRKR 172
>gi|410495114|ref|YP_006904960.1| DNA (cytosine-5-)-methyltransferase [Streptococcus dysgalactiae
subsp. equisimilis AC-2713]
gi|410440274|emb|CCI62902.1| K00558 DNA (cytosine-5-)-methyltransferase [Streptococcus
dysgalactiae subsp. equisimilis AC-2713]
Length = 471
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
+VDV+ PPCQG+S R +DD+RN I+ +D VE + PKYV +ENV LK
Sbjct: 160 NVDVLMATPPCQGMSTAGR-----QQIDDDRNMLILPVIDAVELINPKYVFIENVPMFLK 214
Query: 483 FDKASLGRYA-----LSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
G L + KY+ I +G+PQ R R
Sbjct: 215 TSIFVEGENKLIIDFLQEKLSEKYRFSISSIDVSDFGVPQSRER 258
>gi|400598697|gb|EJP66406.1| DNA methyltransferase Dim-2 [Beauveria bassiana ARSEF 2860]
Length = 1142
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 405 IKEFVRNGFKSKI---LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQ--IVI 459
I +F R F+ + +P G+VD I GG PC G S D D +R Q +
Sbjct: 737 IDDFQRLAFQGRFADNIPQVGEVDFISGGSPCPGFSQLTN----DKETDAQRKNQSLVAA 792
Query: 460 FMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSR----LVHMKYQARFGIIAAGCYGL 515
F V+ +PKY ++ENV I++ + G S+ LV M YQAR ++ A G
Sbjct: 793 FASCVDLYRPKYGILENVAGIIQ-KHQNRGHDVFSQLMCALVGMGYQARLVLLDALSCGS 851
Query: 516 PQFRLR 521
Q R R
Sbjct: 852 AQVRSR 857
>gi|387812928|ref|YP_005428405.1| DNA-cytosine methyltransferase [Marinobacter hydrocarbonoclasticus
ATCC 49840]
gi|381337935|emb|CCG93982.1| Site-specific DNA-methyltransferase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 395
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 11/106 (10%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
DV + GGPPCQ S R + + DER + F+ +V+ ++P++ +MENV +
Sbjct: 92 DVFAVVGGPPCQAYSTAGRRKGEE----DERGQLYQQFVHVVDTIRPRFFVMENVKGLAS 147
Query: 483 F--DKASLGRYALSRLVHMKYQAR-----FGIIAAGCYGLPQFRLR 521
DK + + AL +++ K++A G++ A YG PQFR R
Sbjct: 148 MFVDKGTEHQRALLQVILEKFKALGYHTVHGVLDAVHYGTPQFRER 193
>gi|315611977|ref|ZP_07886895.1| C-5 cytosine-specific DNA methylase [Streptococcus sanguinis ATCC
49296]
gi|315315966|gb|EFU64000.1| C-5 cytosine-specific DNA methylase [Streptococcus sanguinis ATCC
49296]
Length = 359
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEF---LKPKYVLMENVV 478
G VD+ICGG PCQ S +D R +F +I F L+PKY+L+ENV
Sbjct: 65 GRVDIICGGFPCQAFS----IAGARRGFEDTRG---TLFFEIARFASILRPKYLLLENVK 117
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L D + L L + Y + I+ + +G+PQ R R
Sbjct: 118 GLLNHDGGATFETILGALDELGYNVEWQILNSKDFGVPQNRER 160
>gi|225863800|ref|YP_002749178.1| cytosine-specific methyltransferase NlaX [Bacillus cereus 03BB102]
gi|225788166|gb|ACO28383.1| cytosine-specific methyltransferase NlaX [Bacillus cereus 03BB102]
Length = 576
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 420 LPGDVDVICGGPPCQGIS------GYNRFRNVDSPLDDERNRQIVIFMDIVEFLK---PK 470
L G VDVICGG PCQ S G+ R +F +I F K P+
Sbjct: 64 LRGQVDVICGGFPCQAFSIAGKRLGFAETRGT-------------LFFEIARFAKEIQPQ 110
Query: 471 YVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
Y+ +ENV +L D + R LS L + Y A + ++ + +G+PQ R R
Sbjct: 111 YLFLENVKGLLNHDGGNTFRTILSTLDELGYDAEWQVLNSKDFGVPQNRER 161
>gi|390441689|ref|ZP_10229729.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis sp. T1-4]
gi|389835002|emb|CCI33855.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis sp. T1-4]
Length = 381
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSP---LDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
++ + GGPPCQG S RN+ + L+D RN F+ V+ +P +V+MENV +
Sbjct: 72 ELTALIGGPPCQGFS-----RNIPAGYRYLNDSRNHLYKSFLGFVQEFRPLHVVMENVPE 126
Query: 480 ILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
ILK + ++ L YQ + A YG+PQ R R
Sbjct: 127 ILKAYGGIIRDEIVAHLESWGYQVVTTSLNAAYYGVPQTRSR 168
>gi|302873652|ref|YP_003842285.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|307686624|ref|ZP_07629070.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|302576509|gb|ADL50521.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
Length = 445
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 9/83 (10%)
Query: 403 ERIKEFVRNGFKSKIL----PLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIV 458
E EF+RN ++ + +P D+D I GGPPCQG S R ++ DD RN
Sbjct: 63 ELTGEFIRNSIQNLAIFAEGSVPEDIDAIFGGPPCQGFSRAGRRKS-----DDPRNLLFK 117
Query: 459 IFMDIVEFLKPKYVLMENVVDIL 481
++ ++ + PKYV+MENVV L
Sbjct: 118 EYLRVIREVNPKYVVMENVVGFL 140
>gi|154312053|ref|XP_001555355.1| hypothetical protein BC1G_06060 [Botryotinia fuckeliana B05.10]
Length = 1152
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDD---ERNRQIVIFMDIVEFLKPKYVLM 474
+P GD+D+I GGPPCQG S NR N + L + I F+ V+F +PKY L+
Sbjct: 684 MPAKGDIDMIVGGPPCQGWSRANRKNNPNKILKEPICPMREAIATFLSYVDFYRPKYFLL 743
Query: 475 ENV 477
ENV
Sbjct: 744 ENV 746
>gi|425462210|ref|ZP_18841684.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9808]
gi|389824798|emb|CCI25960.1| Cytosine specific DNA methyltransferase (modular protein)
[Microcystis aeruginosa PCC 9808]
Length = 381
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSP---LDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
++ + GGPPCQG S RN+ + L+D RN F+ V+ +P +V+MENV +
Sbjct: 72 ELTALIGGPPCQGFS-----RNIPAGYRYLNDSRNHLYKSFLGFVQEFRPLHVVMENVPE 126
Query: 480 ILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
ILK + ++ L YQ + A YG+PQ R R
Sbjct: 127 ILKAYGGIIRDEIVAHLESWGYQVVTTSLNAAYYGVPQTRSR 168
>gi|414079711|ref|YP_007001135.1| DNA-cytosine methyltransferase [Anabaena sp. 90]
gi|413972990|gb|AFW97078.1| DNA-cytosine methyltransferase [Anabaena sp. 90]
Length = 390
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 25/123 (20%)
Query: 420 LPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
LPG++D++ GGPPCQ S + +V P R + F+ IV+ ++P++ LMENV
Sbjct: 82 LPGEIDLVTGGPPCQPFSTAGKRGSVMDP----RGSLFMDFIRIVKEVQPRFFLMENVRG 137
Query: 480 ILKF------------DKASLG---------RYALSRLVHMKYQARFGIIAAGCYGLPQF 518
+L D +LG + L+ + + Y + ++ A YG+PQ
Sbjct: 138 LLSAFLRHRPINQRGKDYPALGLDEMNGAALKVVLAEMKELGYNVVYNLLEAADYGVPQN 197
Query: 519 RLR 521
R R
Sbjct: 198 RYR 200
>gi|409990392|ref|ZP_11273771.1| cytosine specific DNA methyltransferase [Arthrospira platensis str.
Paraca]
gi|291570060|dbj|BAI92332.1| type II DNA modification methyltransferase [Arthrospira platensis
NIES-39]
gi|409938741|gb|EKN80026.1| cytosine specific DNA methyltransferase [Arthrospira platensis str.
Paraca]
Length = 418
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
V ++ GGPPCQG S + R+ + P RN F+ IV ++P YV+MENV IL
Sbjct: 143 SVHLVVGGPPCQGFSVAGK-RDPNDP----RNHLFQEFIRIVAEVRPWYVVMENVPGILT 197
Query: 483 FDKASLGRYALSRLVHMKY-QARFGIIAAGCYGLPQFRLR 521
K ++ + + + Y I+ + YG+PQ R R
Sbjct: 198 LKKGTIKQAIFAAFEAIGYTNISVAILESAAYGVPQIRPR 237
>gi|365960558|ref|YP_004942125.1| cytosine-specific methyltransferase [Flavobacterium columnare ATCC
49512]
gi|365737239|gb|AEW86332.1| cytosine-specific methyltransferase [Flavobacterium columnare ATCC
49512]
Length = 405
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 413 FKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYV 472
+ +++ L G V +I GGPPCQG S R RN +D RN I ++ VE ++PK +
Sbjct: 73 YNAQLEKLKGKVTMIAGGPPCQGFSMAGR-RNE----NDSRNDLINSYIKFVETVEPKII 127
Query: 473 LMENVVDI-LKFDKASLGRYALSRLVHMK-----YQARFGIIAAGCYGLPQFRLR 521
ENV ++F K A S +V K Y + ++ G YG+PQ R R
Sbjct: 128 FFENVKGFTMEFKKNKEKGIAYSSIVTQKLNDLGYFVKGQLVNFGEYGVPQKRTR 182
>gi|425448027|ref|ZP_18828008.1| Cytosine-specific DNA methylase [Microcystis aeruginosa PCC 9443]
gi|389731291|emb|CCI04644.1| Cytosine-specific DNA methylase [Microcystis aeruginosa PCC 9443]
Length = 387
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+ ++ GGPPCQG S + R+ + P RN F+ +V ++P YV+MENV IL
Sbjct: 127 IHLVVGGPPCQGFSVAGK-RDANDP----RNHLFQEFIRLVSEIQPWYVVMENVPGILTI 181
Query: 484 DKASLGRYALSRLVHMKYQ-ARFGIIAAGCYGLPQFRLR 521
K + + L + Y+ I+ + YG+PQ R R
Sbjct: 182 KKGEIKQNILEAFQSIGYRNISIAILESAAYGVPQIRPR 220
>gi|79835472|gb|ABB52097.1| Mod [Arthrospira platensis]
Length = 321
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
V ++ GGPPCQG S + R+ + P RN F+ IV ++P YV+MENV IL
Sbjct: 144 VHLVVGGPPCQGFSVAGK-RDPNDP----RNHLFQEFIRIVAEVRPWYVVMENVPGILTL 198
Query: 484 DKASLGRYALSRLVHMKY-QARFGIIAAGCYGLPQFRLR 521
K ++ + + + Y I+ + YG+PQ R R
Sbjct: 199 KKGTIKQAIFAAFEAIGYTNISVAILESAAYGVPQIRPR 237
>gi|307153788|ref|YP_003889172.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
gi|306984016|gb|ADN15897.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7822]
Length = 424
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
D+DV+ GGPPCQG S + LDD RN I F+ +V L PKY ++ENV +
Sbjct: 78 DIDVVFGGPPCQGFSLIGK-----RLLDDPRNDLIYHFLRLVLELNPKYFILENVPGMAL 132
Query: 483 FDKASLGRYALSRLVHMKY--QARFGIIAAGCYGLPQFRLR 521
L +++ Y + I+ A YG+PQ R R
Sbjct: 133 GKHKKLIEEIINKFQENNYNVEENIKILNAAHYGVPQNRER 173
>gi|20068989|gb|AAM09642.1|AF458983_2 m6 adenine and m5 cytosine DNA methyltransferase [Hafnia alvei]
Length = 1061
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 424 VDVICGGPPCQGIS--GYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
+D++ GGPPCQG S GY DD+RN I++ E L+P+ ++ENV +
Sbjct: 893 LDLLVGGPPCQGFSHAGYRLS-------DDKRNDLASIYLHFAERLRPRIFILENVEGLA 945
Query: 482 KFDKASLGRYALSRLVHMKYQARFGI--IAAGCYGLPQFRLR 521
F+K R + L + Y+ + + + YG+PQ R R
Sbjct: 946 TFNKGQTLRDICTTLQELGYRVNIPVWKLCSEQYGVPQMRRR 987
>gi|434394728|ref|YP_007129675.1| DNA-cytosine methyltransferase [Gloeocapsa sp. PCC 7428]
gi|428266569|gb|AFZ32515.1| DNA-cytosine methyltransferase [Gloeocapsa sp. PCC 7428]
Length = 372
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+D++ GGPPCQG S + +D RN + +FM VE KP+ + ENV + F
Sbjct: 71 IDLVFGGPPCQGFSVAGKMNP-----NDPRNELLWVFMKAVELTKPRAFICENVKALAVF 125
Query: 484 DKASLGRYAL-SRLVHMKYQARFGIIAAGCYGLPQFRLR 521
DK S R L S + Y + ++ + +G+PQ R R
Sbjct: 126 DKWSKMRQRLFSVTSQLGYSYKLVVLNSSDFGVPQSRER 164
>gi|421558133|ref|ZP_16004018.1| cytosine-specific methyltransferase [Neisseria meningitidis 92045]
gi|402338905|gb|EJU74134.1| cytosine-specific methyltransferase [Neisseria meningitidis 92045]
Length = 333
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VD+I GGPPCQG S + + DD RN F+ IV+ ++P + +MENV +
Sbjct: 73 VDLIIGGPPCQGFSMAGKIGRTFT--DDPRNHLFKEFVRIVKIVQPYFFVMENVARLYTH 130
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + ++ Y I++A +G+PQ R R
Sbjct: 131 NSGKTRIEIIQAFQNIGYSVECKILSAADFGVPQIRSR 168
>gi|421543479|ref|ZP_15989571.1| cytosine-specific methyltransferase [Neisseria meningitidis NM140]
gi|421545540|ref|ZP_15991600.1| cytosine-specific methyltransferase [Neisseria meningitidis NM183]
gi|421547595|ref|ZP_15993627.1| cytosine-specific methyltransferase [Neisseria meningitidis NM2781]
gi|421551817|ref|ZP_15997800.1| cytosine-specific methyltransferase [Neisseria meningitidis NM576]
gi|254673893|emb|CBA09676.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis
alpha275]
gi|402325768|gb|EJU61175.1| cytosine-specific methyltransferase [Neisseria meningitidis NM183]
gi|402326590|gb|EJU61990.1| cytosine-specific methyltransferase [Neisseria meningitidis NM140]
gi|402327615|gb|EJU63002.1| cytosine-specific methyltransferase [Neisseria meningitidis NM2781]
gi|402333157|gb|EJU68469.1| cytosine-specific methyltransferase [Neisseria meningitidis NM576]
Length = 326
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VD+I GGPPCQG S + + DD RN F+ IV+ ++P + +MENV +
Sbjct: 73 VDLIIGGPPCQGFSMAGKIGRTFT--DDPRNHLFKEFVRIVKIVQPYFFVMENVARLYTH 130
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + ++ Y I++A +G+PQ R R
Sbjct: 131 NSGKTRIEIIQAFQNIGYSVECKILSAADFGVPQIRSR 168
>gi|1098476|gb|AAC37047.1| orf; homologous to Haemophilus parahaemolyticus hphIM(C) Accession
Number M24625 [Neisseria meningitidis]
Length = 276
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VD+I GGPPCQG S + + DD RN F+ IV+ ++P + +MENV +
Sbjct: 73 VDLIIGGPPCQGFSMAGKIGRTFT--DDPRNHLFKEFVRIVKIVQPYFFVMENVARLYTH 130
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + ++ Y I++A +G+PQ R R
Sbjct: 131 NSGKTRIEIIQAFQNIGYSVECKILSAADFGVPQIRSR 168
>gi|421539258|ref|ZP_15985420.1| cytosine-specific methyltransferase [Neisseria meningitidis 93004]
gi|402321838|gb|EJU57309.1| cytosine-specific methyltransferase [Neisseria meningitidis 93004]
Length = 333
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VD+I GGPPCQG S + + DD RN F+ IV+ ++P + +MENV +
Sbjct: 73 VDLIIGGPPCQGFSMAGKIGRTFT--DDPRNHLFKEFVRIVKIVQPYFFVMENVARLYTH 130
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + ++ Y I++A +G+PQ R R
Sbjct: 131 NSGKTRIEIIQAFQNIGYSVECKILSAADFGVPQIRSR 168
>gi|309790027|ref|ZP_07684601.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides
DG-6]
gi|308227882|gb|EFO81536.1| C-5 cytosine-specific DNA methylase [Oscillochloris trichoides DG6]
Length = 438
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 424 VDVICGGPPCQGIS--GYNRFRNV--DSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
VDVI GGPPCQG + G + R++ +S ++ N FM VE L+P +MENV D
Sbjct: 125 VDVIIGGPPCQGFARIGKGKIRSIELESHYEEVLNSLYKEFMRFVEILQPLAFVMENVPD 184
Query: 480 ILKFDKASLGRYALSRLVH--MKYQARFGIIAAGCYGLPQFRLR 521
+ ++ + L+R+ + KY + I+ A YG+PQ R R
Sbjct: 185 MARYQNGEV----LNRIRNKCTKYTIEWRILNAVDYGVPQRRQR 224
>gi|389851561|ref|YP_006353795.1| cytosine-specific DNA-methyltransferase [Pyrococcus sp. ST04]
gi|388248867|gb|AFK21720.1| cytosine-specific DNA-methyltransferase [Pyrococcus sp. ST04]
Length = 298
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLD----DERNRQIVIFMDIVEFLKPKYVLMENVVD 479
VD+I GGPPC+ + N+ R ++P D D R ++ F+ V LKP+ +MENV
Sbjct: 63 VDIIIGGPPCEPFTAINQKRK-ENPRDRLYKDPIGRLVLEFIRFVRELKPEIFIMENVPQ 121
Query: 480 ILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
I++ + Y + Y F I+ A YG+PQ R R
Sbjct: 122 IMELED-----YLVKEFDRAGYSVEFNILNALDYGVPQIRRR 158
>gi|344341424|ref|ZP_08772344.1| C-5 cytosine-specific DNA methylase [Thiocapsa marina 5811]
gi|343798759|gb|EGV16713.1| C-5 cytosine-specific DNA methylase [Thiocapsa marina 5811]
Length = 427
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
D+DV+ PPC G S N ++D DD+RN ++ V L+P+ ++MEN +ILK
Sbjct: 93 DLDVLSACPPCTGFSRANPNNHLD---DDDRNSLVLRTAHWVRTLRPRVLVMENAREILK 149
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ A R +L M Y R I +GLPQ R R
Sbjct: 150 GNFAHHFRELRRQLERMGYDVRATIHMLDRFGLPQRRER 188
>gi|421564461|ref|ZP_16010260.1| cytosine-specific methyltransferase [Neisseria meningitidis NM3081]
gi|402346058|gb|EJU81162.1| cytosine-specific methyltransferase [Neisseria meningitidis NM3081]
Length = 276
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VD+I GGPPCQG S + + DD RN F+ IV+ ++P + +MENV +
Sbjct: 73 VDLIIGGPPCQGFSMAGKIGRTFT--DDPRNHLFKEFVRIVKIVQPYFFVMENVARLYTH 130
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + ++ Y I++A +G+PQ R R
Sbjct: 131 NSGKTRIEIIQAFQNIGYSVECKILSAADFGVPQIRSR 168
>gi|385339121|ref|YP_005892993.1| modification methylase HphIA [Neisseria meningitidis G2136]
gi|385854261|ref|YP_005900774.1| modification methylase HphIA [Neisseria meningitidis M01-240355]
gi|416176215|ref|ZP_11609516.1| modification methylase HphIA [Neisseria meningitidis M6190]
gi|416190835|ref|ZP_11615946.1| modification methylase HphIA [Neisseria meningitidis ES14902]
gi|433466202|ref|ZP_20423666.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 87255]
gi|433468283|ref|ZP_20425722.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 98080]
gi|433491538|ref|ZP_20448641.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM586]
gi|433495787|ref|ZP_20452837.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis M7089]
gi|433497778|ref|ZP_20454798.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis M7124]
gi|433499860|ref|ZP_20456854.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM174]
gi|433502032|ref|ZP_20459005.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM126]
gi|433508261|ref|ZP_20465147.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 12888]
gi|325133150|gb|EGC55821.1| modification methylase HphIA [Neisseria meningitidis M6190]
gi|325138766|gb|EGC61318.1| modification methylase HphIA [Neisseria meningitidis ES14902]
gi|325197365|gb|ADY92821.1| modification methylase HphIA [Neisseria meningitidis G2136]
gi|325203202|gb|ADY98655.1| modification methylase HphIA [Neisseria meningitidis M01-240355]
gi|432205525|gb|ELK61553.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 87255]
gi|432206688|gb|ELK62691.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 98080]
gi|432231223|gb|ELK86890.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM586]
gi|432237429|gb|ELK93023.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis M7124]
gi|432237813|gb|ELK93403.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis M7089]
gi|432237998|gb|ELK93582.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM174]
gi|432243787|gb|ELK99293.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM126]
gi|432249912|gb|ELL05310.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 12888]
Length = 332
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VD+I GGPPCQG S + + DD RN F+ IV+ ++P + +MENV +
Sbjct: 73 VDLIIGGPPCQGFSMAGKIGRTFT--DDPRNHLFKEFVRIVKIVQPYFFVMENVARLYTH 130
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + ++ Y I++A +G+PQ R R
Sbjct: 131 NSGKTRIEIIQAFQNIGYSVECKILSAADFGVPQIRSR 168
>gi|4033737|gb|AAC97190.1| modification methylase M.NspI [Nostoc sp. PCC 7524]
Length = 397
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
+V+++ GGPPCQG S + R+ P RNR F+ +V ++P YV+MENV IL
Sbjct: 127 EVNLVVGGPPCQGFSVAGK-RDPKDP----RNRLFYEFVRVVSEIRPWYVVMENVPGILT 181
Query: 483 FDKASLGRYALSRLVHMKY-QARFGIIAAGCYGLPQFRLR 521
++ + + + Y I+ + YG+PQ R R
Sbjct: 182 IQNGNVKQAIIEAFESIGYPHVSVAILESADYGVPQIRPR 221
>gi|322700739|gb|EFY92492.1| putative DNA cytosine methyltransferase [Metarhizium acridum CQMa
102]
Length = 950
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 14/126 (11%)
Query: 405 IKEFVRNGFK---SKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQ--IVI 459
I +F + F SK +P G VD I GG PC G S D D++R Q +
Sbjct: 532 IDDFQKEAFSGNFSKSVPTIGSVDFISGGSPCPGFS----LLTNDKTTDEQRKNQSLVAA 587
Query: 460 FMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSR----LVHMKYQARFGIIAAGCYGL 515
F V+ +P Y L+ENV I++ KA+ + LS+ +V + YQA+ + A YG
Sbjct: 588 FASCVDLYRPMYGLLENVPGIVQ-SKANRDQDVLSQFICAIVGIGYQAQVFCLDASSYGS 646
Query: 516 PQFRLR 521
Q R R
Sbjct: 647 AQRRSR 652
>gi|304388871|ref|ZP_07370921.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC
13091]
gi|416199504|ref|ZP_11619409.1| cytosine-specificmethyltransferase HphIA [Neisseria meningitidis
961-5945]
gi|421537095|ref|ZP_15983285.1| cytosine-specific methyltransferase [Neisseria meningitidis 93003]
gi|421541419|ref|ZP_15987539.1| cytosine-specific methyltransferase [Neisseria meningitidis NM255]
gi|421549637|ref|ZP_15995648.1| cytosine-specific methyltransferase [Neisseria meningitidis 69166]
gi|421553827|ref|ZP_15999780.1| cytosine-specific methyltransferase [Neisseria meningitidis 98008]
gi|421556067|ref|ZP_16001984.1| cytosine-specific methyltransferase [Neisseria meningitidis 80179]
gi|421560236|ref|ZP_16006095.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM2657]
gi|421566550|ref|ZP_16012294.1| cytosine-specific methyltransferase [Neisseria meningitidis NM3001]
gi|427826168|ref|ZP_18993227.1| modification methylase HphIA [Neisseria meningitidis H44/76]
gi|433464072|ref|ZP_20421567.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM422]
gi|433470383|ref|ZP_20427783.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 68094]
gi|433472462|ref|ZP_20429833.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 97021]
gi|433474559|ref|ZP_20431907.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 88050]
gi|433476647|ref|ZP_20433975.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 70012]
gi|433478804|ref|ZP_20436104.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 63041]
gi|433480890|ref|ZP_20438163.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2006087]
gi|433483014|ref|ZP_20440255.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2002038]
gi|433485106|ref|ZP_20442314.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 97014]
gi|433487265|ref|ZP_20444444.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis M13255]
gi|433489438|ref|ZP_20446577.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM418]
gi|433493661|ref|ZP_20450737.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM762]
gi|433504001|ref|ZP_20460946.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 9506]
gi|433506124|ref|ZP_20463045.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 9757]
gi|433510361|ref|ZP_20467206.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 4119]
gi|433512444|ref|ZP_20469247.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 63049]
gi|433514551|ref|ZP_20471328.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2004090]
gi|433516661|ref|ZP_20473415.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 96023]
gi|433518863|ref|ZP_20475591.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 65014]
gi|433520863|ref|ZP_20477566.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 61103]
gi|433522982|ref|ZP_20479656.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 97020]
gi|433525099|ref|ZP_20481746.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 69096]
gi|433527239|ref|ZP_20483852.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM3652]
gi|433529338|ref|ZP_20485938.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM3642]
gi|433531455|ref|ZP_20488025.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2007056]
gi|433533666|ref|ZP_20490215.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2001212]
gi|433535665|ref|ZP_20492185.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 77221]
gi|433537829|ref|ZP_20494316.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 70030]
gi|433540017|ref|ZP_20496475.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 63006]
gi|302028149|gb|ADK90963.1| unknown [Neisseria meningitidis]
gi|304337164|gb|EFM03348.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC
13091]
gi|316985914|gb|EFV64853.1| modification methylase HphIA [Neisseria meningitidis H44/76]
gi|325143322|gb|EGC65656.1| cytosine-specificmethyltransferase HphIA [Neisseria meningitidis
961-5945]
gi|389604691|emb|CCA43617.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis
alpha522]
gi|402320092|gb|EJU55590.1| cytosine-specific methyltransferase [Neisseria meningitidis 93003]
gi|402320113|gb|EJU55610.1| cytosine-specific methyltransferase [Neisseria meningitidis NM255]
gi|402332286|gb|EJU67615.1| cytosine-specific methyltransferase [Neisseria meningitidis 69166]
gi|402334394|gb|EJU69683.1| cytosine-specific methyltransferase [Neisseria meningitidis 98008]
gi|402337920|gb|EJU73159.1| cytosine-specific methyltransferase [Neisseria meningitidis 80179]
gi|402340409|gb|EJU75609.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM2657]
gi|402345154|gb|EJU80278.1| cytosine-specific methyltransferase [Neisseria meningitidis NM3001]
gi|432206110|gb|ELK62123.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM422]
gi|432211816|gb|ELK67760.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 68094]
gi|432212599|gb|ELK68535.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 97021]
gi|432212619|gb|ELK68554.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 88050]
gi|432217800|gb|ELK73665.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 70012]
gi|432219012|gb|ELK74862.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 63041]
gi|432219510|gb|ELK75354.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2006087]
gi|432224172|gb|ELK79944.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2002038]
gi|432225065|gb|ELK80820.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 97014]
gi|432226030|gb|ELK81763.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis M13255]
gi|432230434|gb|ELK86109.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM418]
gi|432231839|gb|ELK87494.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM762]
gi|432243384|gb|ELK98895.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 9506]
gi|432244399|gb|ELK99889.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 9757]
gi|432250639|gb|ELL06030.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 63049]
gi|432250717|gb|ELL06105.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 4119]
gi|432256453|gb|ELL11775.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 96023]
gi|432256685|gb|ELL12005.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2004090]
gi|432256972|gb|ELL12281.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 65014]
gi|432262846|gb|ELL18078.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 61103]
gi|432263061|gb|ELL18289.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 97020]
gi|432263610|gb|ELL18826.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 69096]
gi|432267308|gb|ELL22486.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM3652]
gi|432269720|gb|ELL24874.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2007056]
gi|432269989|gb|ELL25136.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM3642]
gi|432274219|gb|ELL29312.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2001212]
gi|432275969|gb|ELL31031.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 70030]
gi|432276676|gb|ELL31731.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 77221]
gi|432278226|gb|ELL33269.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 63006]
Length = 276
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VD+I GGPPCQG S + + DD RN F+ IV+ ++P + +MENV +
Sbjct: 73 VDLIIGGPPCQGFSMAGKIGRTFT--DDPRNHLFKEFVRIVKIVQPYFFVMENVARLYTH 130
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + ++ Y I++A +G+PQ R R
Sbjct: 131 NSGKTRIEIIQAFQNIGYSVECKILSAADFGVPQIRSR 168
>gi|407928299|gb|EKG21159.1| hypothetical protein MPH_01515 [Macrophomina phaseolina MS6]
Length = 1010
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERN-RQIVIFMDIVEFLKPKYVLMENVVDI 480
G +D I G PCQG S R ++ +S L RN I ++F +PKY L+ENVV +
Sbjct: 589 GSIDFIAAGSPCQGFSVLQRDKSSESSL---RNISMIASVAAFIDFYRPKYALLENVVAM 645
Query: 481 LKFDKASLGRYA--LSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ LG + L LV + YQ + A +G PQ R R
Sbjct: 646 AHRGREQLGIFPQLLCTLVGLGYQVSQHYLDAWSFGDPQRRSR 688
>gi|425440258|ref|ZP_18820564.1| Cytosine-specific DNA methylase [Microcystis aeruginosa PCC 9717]
gi|389719334|emb|CCH96802.1| Cytosine-specific DNA methylase [Microcystis aeruginosa PCC 9717]
Length = 387
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+ ++ GGPPCQG S + R+ + P RN F+ +V ++P YV+MENV IL
Sbjct: 127 IHLVVGGPPCQGFSVAGK-RDANDP----RNHLFQEFIRLVSEIQPWYVVMENVPGILTI 181
Query: 484 DKASLGRYALSRLVHMKY-QARFGIIAAGCYGLPQFRLR 521
K + + L + Y I+ + YG+PQ R R
Sbjct: 182 KKGEIKQNILEAFQSIGYGNISIAILESAAYGVPQIRPR 220
>gi|1644234|dbj|BAA11339.1| ApaLI methylase [Acetobacter pasteurianus]
Length = 429
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Query: 426 VICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDK 485
V+ GGPPCQG S RN P RN I +++IVE L P++ + ENV +L
Sbjct: 74 VVIGGPPCQGFSTAGP-RNFADP----RNLLIFNYLNIVERLSPRWFIFENVEGLL---- 124
Query: 486 ASLGRYALSRLVH----MKYQARFGIIAAGCYGLPQFRLR 521
S G L+RLV M Y R + YG+PQ R R
Sbjct: 125 TSGGGRDLARLVREFVDMGYSVRLQKVNLAAYGVPQTRKR 164
>gi|166363188|ref|YP_001655461.1| cytosine-specific DNA methylase [Microcystis aeruginosa NIES-843]
gi|166085561|dbj|BAG00269.1| cytosine-specific DNA methylase [Microcystis aeruginosa NIES-843]
Length = 387
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+ ++ GGPPCQG S + R+ + P RN F+ +V ++P YV+MENV IL
Sbjct: 127 IHLVVGGPPCQGFSVAGK-RDANDP----RNHLFQEFIRLVSEIQPWYVVMENVPGILTI 181
Query: 484 DKASLGRYALSRLVHMKY-QARFGIIAAGCYGLPQFRLR 521
K + + L + Y I+ + YG+PQ R R
Sbjct: 182 KKGEIKQNILEAFQSIGYGNISIAILESAAYGVPQIRPR 220
>gi|317127845|ref|YP_004094127.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522]
gi|315472793|gb|ADU29396.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522]
Length = 363
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 358 ARIVDICYGDPNESGKRGLNFKVHWKGYST--SEDSW-EPIEGL-RNCPERIKEF--VRN 411
++I+D+ SG G + GY T + D W + IE N ++ E + +
Sbjct: 4 SKIIDLF------SGVGGFSLGFEMAGYETVLAIDFWKDAIETYNHNRENKVAEVMSIHD 57
Query: 412 GFKSKILPLPGD--VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKP 469
K ++ L D ++ I GGPPCQG S ++DERN + + +V+ + P
Sbjct: 58 LSKERLEKLKSDHTIEGIIGGPPCQGFSTVGT-----RDINDERNHLYLEYFRVVKEVMP 112
Query: 470 KYVLMENVVDILKFDKASLGRYALSRLVHMKYQ-ARFGIIAAGCYGLPQFRLR 521
K+ ++ENV +L +K + R ++ Y+ + ++ A YG+PQ R R
Sbjct: 113 KFFVIENVKGLLTLNKGMFKEDIMDRFGNLGYRISEPQVLNAADYGVPQHRHR 165
>gi|323487872|ref|ZP_08093130.1| cytosine-specific methyltransferase [Planococcus donghaensis
MPA1U2]
gi|323398606|gb|EGA91394.1| cytosine-specific methyltransferase [Planococcus donghaensis
MPA1U2]
Length = 367
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLD--DERNRQIVIFMDIVEFLKPKYVLMENVVDI 480
D+D++ GGPPCQG S V +D DER+ I F+D+V+ +KPK +MENV +
Sbjct: 68 DIDIVFGGPPCQGFS-------VAGKMDPQDERSTLIWSFLDVVKAVKPKAFVMENVKAL 120
Query: 481 LKFDKASLGRYALSRL-VHMKYQARFGIIAAGCYGLPQFRLR 521
+K R + R+ + Y ++ + +G+PQ R R
Sbjct: 121 ATLEKWGRVREEIYRVSSELGYTCYPFLLNSADFGVPQKRER 162
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 14/82 (17%)
Query: 208 LDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEAQVRNEAAEDFLE 267
+ L++G GGM G + WA + DK AC + + N+PE + +++E
Sbjct: 8 ISLFTGAGGMDVGF------KSAGIHVEWANEIDKDACNTYETNNPETILAKGDLRNYIE 61
Query: 268 LVKEWQKL--------CKRFAV 281
+KE + + C+ F+V
Sbjct: 62 TLKEHRDIDIVFGGPPCQGFSV 83
>gi|218441171|ref|YP_002379500.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424]
gi|218173899|gb|ACK72632.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 7424]
Length = 415
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI-L 481
++DV+ GGPPCQG S + +DD RN I F+ +V L PKY +MENV + L
Sbjct: 79 EIDVVFGGPPCQGFSLMGK-----RLIDDPRNELIFHFLRLVLELNPKYFVMENVPGLAL 133
Query: 482 KFDKASLGRYALS-RLVHMKYQARFGIIAAGCYGLPQFRLR 521
K L R L K + I+ A YG+PQ R R
Sbjct: 134 GQHKQFLDRIILEFNQKGYKIDNNYQILNAANYGVPQNRKR 174
>gi|2522459|gb|AAC45757.1| M.BssHII methylase [Geobacillus stearothermophilus]
Length = 375
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 425 DVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFD 484
D++ GGPPCQ S + + + P R I ++ +E + P + +MENV ++
Sbjct: 237 DIVFGGPPCQAFSQAGKQKATNDP----RGNLIYEYLRFIEKINPPFFVMENVANLKGVQ 292
Query: 485 KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ L + L R+ ++ Y + A YG PQ R R
Sbjct: 293 RGELYQDILERMSNLGYNVTVAPLLAADYGAPQLRKR 329
>gi|427732148|ref|YP_007078385.1| DNA-methyltransferase Dcm [Nostoc sp. PCC 7524]
gi|427368067|gb|AFY50788.1| DNA-methyltransferase Dcm [Nostoc sp. PCC 7524]
Length = 397
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
+V+++ GGPPCQG S + R+ P RNR F+ +V ++P YV+MENV IL
Sbjct: 127 EVNLVVGGPPCQGFSVAGK-RDPKDP----RNRLFYEFVRVVSEIRPWYVVMENVPGILT 181
Query: 483 FDKASLGRYALSRLVHMKY-QARFGIIAAGCYGLPQFRLR 521
++ + + + Y I+ + YG+PQ R R
Sbjct: 182 IQNGNVKQAIIEAFESIGYPHVSVAILESADYGVPQIRPR 221
>gi|354567856|ref|ZP_08987023.1| DNA-cytosine methyltransferase [Fischerella sp. JSC-11]
gi|353541530|gb|EHC10997.1| DNA-cytosine methyltransferase [Fischerella sp. JSC-11]
Length = 528
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 59/139 (42%), Gaps = 26/139 (18%)
Query: 405 IKEFVRNGFKSKI-LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDI 463
I+++ N + + L L D+DVI GGPPCQ S + + +DER + F+D+
Sbjct: 169 IRDYSANEIRERAGLGLQEDIDVIVGGPPCQAFSSAGKRQG----FNDERGNVFLTFIDL 224
Query: 464 VEFLKPKYVLMENVVDILKF---------------------DKASLGRYALSRLVHMKYQ 502
+ L+PK+ ++ENV +L + Y RL Y
Sbjct: 225 ITELRPKFAVIENVRGLLSAPLKHRPHEMRGVNYPPLSQEEQRGGALLYITRRLKQAGYS 284
Query: 503 ARFGIIAAGCYGLPQFRLR 521
F + A +G PQ R R
Sbjct: 285 VSFNLYNAANFGSPQQRER 303
>gi|254671508|emb|CBA09095.1| site-specific DNA-methyltransferase [Neisseria meningitidis
alpha153]
Length = 258
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VD+I GGPPCQG S + + DD RN F+ IV+ ++P + +MENV +
Sbjct: 55 VDLIIGGPPCQGFSMAGKIGRTFT--DDPRNHLFKEFVRIVKIVQPYFFVMENVARLYTH 112
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + ++ Y I++A +G+PQ R R
Sbjct: 113 NSGKTRIEIIQAFQNIGYSVECKILSAADFGVPQIRSR 150
>gi|423128681|ref|ZP_17116360.1| DNA (cytosine-5-)-methyltransferase [Klebsiella oxytoca 10-5250]
gi|376393163|gb|EHT05824.1| DNA (cytosine-5-)-methyltransferase [Klebsiella oxytoca 10-5250]
Length = 412
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 14/107 (13%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G++D+I GGPPCQG S + R N +D RN ++ + D V+ +PK L+ENV +L
Sbjct: 83 GELDLILGGPPCQGFSTH-RINNAGK--NDPRNLLLIRYFDFVKKFRPKVFLVENVPGLL 139
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIA-------AGCYGLPQFRLR 521
A LSR + + ++ + II A YG+PQ R R
Sbjct: 140 WPRHAEY----LSRFMALSHEHGYKIIGKKPFILNARDYGVPQNRKR 182
>gi|357458741|ref|XP_003599651.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|357491293|ref|XP_003615934.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355488699|gb|AES69902.1| Cytosine-specific methyltransferase [Medicago truncatula]
gi|355517269|gb|AES98892.1| Cytosine-specific methyltransferase [Medicago truncatula]
Length = 502
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 29/38 (76%)
Query: 211 YSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESL 248
YSGCGGMSTGLC G LS + +VTRWA+D ++ AC L
Sbjct: 465 YSGCGGMSTGLCQGGMLSISKMVTRWAVDMNEHACMIL 502
>gi|253827583|ref|ZP_04870468.1| putative methylase [Helicobacter canadensis MIT 98-5491]
gi|313141791|ref|ZP_07803984.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis
MIT 98-5491]
gi|253510989|gb|EES89648.1| putative methylase [Helicobacter canadensis MIT 98-5491]
gi|313130822|gb|EFR48439.1| cytosine-specific DNA methyltransferase [Helicobacter canadensis
MIT 98-5491]
Length = 589
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 414 KSKILPLPGD--VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKY 471
K K++ L + V+++ GGPPCQG S + + L DERN + ++++VE + P+
Sbjct: 60 KDKVVNLAKELKVNMVIGGPPCQGFS----LKGKNLGLADERNFLFLEYLELVEKVNPEI 115
Query: 472 VLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV ++ + ++ +M Y I+ A YG+PQ R R
Sbjct: 116 FIIENVKNLYNAVNGYFREEIIKKIKNMGYVVNCKILNAKHYGVPQNRER 165
>gi|330997448|ref|ZP_08321299.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT
11841]
gi|329570822|gb|EGG52538.1| DNA (cytosine-5-)-methyltransferase [Paraprevotella xylaniphila YIT
11841]
Length = 417
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VDVI GGPPCQ S R R+ +D RN ++ IV++ KPK+ + ENVV +L
Sbjct: 97 VDVIIGGPPCQAYSLAGRIRDEHGMRNDYRNYLFECYVKIVKYFKPKFFVFENVVGLL-- 154
Query: 484 DKASLGRYALSRLVHMKYQARF--------GIIAAGCYGLPQFRLR 521
A G SR+ A + + YG+PQ R R
Sbjct: 155 SAAPDGTLITSRISEAFNGAGYVVTPNFKTALFDVADYGIPQHRKR 200
>gi|127439|sp|P05302.1|MTD1_DESNO RecName: Full=Modification methylase DdeI; Short=M.DdeI; AltName:
Full=Cytosine-specific methyltransferase DdeI
gi|79418|pir||S00543 site-specific DNA-methyltransferase (cytosine-specific) (EC
2.1.1.73) DdeI - Desulfovibrio desulfuricans
gi|40795|emb|CAA68505.1| DdeI methylase [Desulfovibrio vulgaris]
Length = 415
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 423 DVDVICGGPPCQGIS-GYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
DVD I GGPPCQG S NR + D RN V F+ V+F PK+ +MENV+ IL
Sbjct: 66 DVDGIIGGPPCQGFSLSGNRDQK------DPRNSLFVDFVRFVKFFSPKFFVMENVLGIL 119
Query: 482 KFDKAS---LGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
S + ++ Y+ I+ A YG+PQ R R
Sbjct: 120 SMKTKSRQYVKDIIAEEFSNVGYKVCVIILNACDYGVPQSRQR 162
>gi|429768004|ref|ZP_19300180.1| DNA (cytosine-5-)-methyltransferase [Brevundimonas diminuta 470-4]
gi|429189569|gb|EKY30396.1| DNA (cytosine-5-)-methyltransferase [Brevundimonas diminuta 470-4]
Length = 445
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
GD+DV+ GGPPCQG S + R+ + P RN ++ I+ L PK ++ENV +L
Sbjct: 88 GDLDVLLGGPPCQGFSVNSHIRSAEDP----RNFLFRHYVRILRGLAPKTFVLENVPGML 143
Query: 482 KFDKASLGRYALSRLVHMK----YQARFGIIAAGCYGLPQFRLR 521
+ + + +S + Y I+ A YG+PQ R R
Sbjct: 144 SLEGGAFLQELVSEISSSADGPGYDVECRILNAAHYGVPQERFR 187
>gi|189459597|ref|ZP_03008382.1| hypothetical protein BACCOP_00223 [Bacteroides coprocola DSM 17136]
gi|189433679|gb|EDV02664.1| DNA (cytosine-5-)-methyltransferase [Bacteroides coprocola DSM
17136]
Length = 387
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 8/111 (7%)
Query: 414 KSKILPLPGD--VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKY 471
K++I+ G+ V+V+ GGPPCQG S Y +R+ + D+RN+ F+++V L+P++
Sbjct: 198 KARIMEACGNTPVNVVVGGPPCQGFS-YAGWRDPN----DKRNQLFKDFVEMVNRLRPEF 252
Query: 472 VLMENVVDILKFDKASLGRYALSRLVHMKYQARFGI-IAAGCYGLPQFRLR 521
+MENV IL K + + + Y+ I + A +G+PQ R R
Sbjct: 253 FVMENVPGILTMRKGDAIKEIIEAFTEIGYRVNVPIKLNAEEFGVPQRRKR 303
>gi|418966068|ref|ZP_13517820.1| DNA binding domain protein, excisionase family [Streptococcus
constellatus subsp. constellatus SK53]
gi|383340945|gb|EID19224.1| DNA binding domain protein, excisionase family [Streptococcus
constellatus subsp. constellatus SK53]
Length = 458
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 51/120 (42%), Gaps = 16/120 (13%)
Query: 413 FKSKILPLPGDVDVICGGPPCQGIS-GYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKY 471
K +P VD+I G PPCQ S NR DDER + ++ I+ +KP Y
Sbjct: 134 LKMAKVPEGRKVDIIFGDPPCQAFSTAGNR-----KAFDDERGNVFLKYLSIISEIKPTY 188
Query: 472 VLMENVVDILKFD----------KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
V++ENV +L K L RL M Y F + A +G PQ R R
Sbjct: 189 VVIENVRGLLSTPFKYGDLEEPIKGGAMMIILDRLKEMGYSVSFNLYNAAYFGAPQIRER 248
>gi|385858452|ref|YP_005904963.1| cytosine specific DNA methyltransferase [Mycoplasma hyorhinis MCLD]
gi|330723541|gb|AEC45911.1| cytosine specific DNA methyltransferase [Mycoplasma hyorhinis MCLD]
Length = 416
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 404 RIKEFVRNGFKSKILPLPGDVDVICGGPPCQGIS-GYNRFRNVDSPLDDERNRQIVIFMD 462
++KE + N FK D+D+I GG PCQG S NR +DD RN + ++
Sbjct: 152 KVKEELYNKFKD------TDIDLIVGGFPCQGFSMAGNRV------VDDPRNSLYLEMLE 199
Query: 463 IVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
IV+ L+PK+VLMENV + + + ++ ++ YQ + + Y + Q R R
Sbjct: 200 IVKNLQPKFVLMENVQGLRTMLNGQVEQKIINDYKNIGYQINVTTLNSADYEVAQTRKR 258
>gi|327356173|gb|EGE85030.1| cytosine-specific methyltransferase [Ajellomyces dermatitidis ATCC
18188]
Length = 1233
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
GDV+VI G PCQG S N +N + + + + I V+F +P+Y ++ENV+ +
Sbjct: 735 GDVEVISAGSPCQGYSNVNNRKN--NAVSMQNSSMIASVASYVDFYRPQYAILENVIAMS 792
Query: 482 -KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ K + L V M YQAR + A +G PQ R R
Sbjct: 793 NRTHKRNPLCQLLCTFVGMGYQARVLNLDAWSFGAPQSRSR 833
>gi|119503900|ref|ZP_01625982.1| putative cytosine-specific methyltransferase [marine gamma
proteobacterium HTCC2080]
gi|119460408|gb|EAW41501.1| putative cytosine-specific methyltransferase [marine gamma
proteobacterium HTCC2080]
Length = 463
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFM-DIVEFLKPKYVLMENVVDILK 482
+D+ICGGPPCQG SG R+ D + Q+ M +I+EF +PK L ENV +L
Sbjct: 113 LDLICGGPPCQGYSGIGHRRSYAVEKKDVPSNQLYEKMAEIIEFFRPKIFLFENVKGLLS 172
Query: 483 FD------KASLGRYALSRLVHMK-YQARFGIIAAGCYGLPQFRLR 521
K + + +R ++ Y + +++A YG+PQ R R
Sbjct: 173 SKWTDEGAKGEIWQDVWNRFNAIEGYTIHWQLVSAKDYGVPQNRPR 218
>gi|414079463|ref|YP_007000887.1| DNA 5-cytosine methylase [Anabaena sp. 90]
gi|413972742|gb|AFW96830.1| DNA 5-cytosine methylase [Anabaena sp. 90]
Length = 415
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
++DV+ GGPPCQG S + DD RN + F+ +V L+PK+ ++ENV +
Sbjct: 75 EIDVVFGGPPCQGFSLIGK-----RSFDDPRNSLVFHFIRLVVELQPKFFVLENVKGMTV 129
Query: 483 FDKASLGRYALSRLVHMKYQ--ARFGIIAAGCYGLPQFRLR 521
+++ YQ A + ++ A YG+PQ R R
Sbjct: 130 GKHKEFIAEIINQFTESGYQIDANYQVLNAANYGVPQNRER 170
>gi|399025008|ref|ZP_10727026.1| DNA-methyltransferase Dcm [Chryseobacterium sp. CF314]
gi|398079109|gb|EJL69981.1| DNA-methyltransferase Dcm [Chryseobacterium sp. CF314]
Length = 413
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 12/130 (9%)
Query: 398 LRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQI 457
L I E ++N S + L G +++I GGPPCQG S R RN DERN I
Sbjct: 65 LTKSAHDINEVIKN-HSSDLKNLRGQINLIAGGPPCQGFSMAGR-RNE----SDERNELI 118
Query: 458 VIFMDIVEFLKPKYVLMENVVDI-LKFDKASLGRYALSRLV-----HMKYQARFGIIAAG 511
++ V+ ++P + ENV ++F K A S LV + Y + ++
Sbjct: 119 KSYIQFVDLVQPDLIFFENVRGFTMEFKKNKEKGIAYSELVLKSLRDLGYYVQGKLVNFS 178
Query: 512 CYGLPQFRLR 521
YG+PQ R R
Sbjct: 179 EYGVPQKRTR 188
>gi|405380104|ref|ZP_11033947.1| DNA-methyltransferase Dcm [Rhizobium sp. CF142]
gi|397323352|gb|EJJ27747.1| DNA-methyltransferase Dcm [Rhizobium sp. CF142]
Length = 494
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 424 VDVICGGPPCQGIS--GYNRFRNV-DSPLD---DERNRQIVIFMDIVEFLKPKYVLMENV 477
+DV+ GGPPCQ + G + R V D P D R + ++ V P VL+ENV
Sbjct: 104 IDVLVGGPPCQAYARVGRAKLREVADHPEAFRVDPRGNLYLRYLAYVRAFCPLAVLIENV 163
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
DIL + ++ + L + Y AR+ +I + +G+PQ R R
Sbjct: 164 PDILHYGHHNVAEEIVEALDDLGYTARYSLINSAFHGVPQMRDR 207
>gi|317056067|ref|YP_004104534.1| DNA-cytosine methyltransferase [Ruminococcus albus 7]
gi|315448336|gb|ADU21900.1| DNA-cytosine methyltransferase [Ruminococcus albus 7]
Length = 425
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
D+D+ICGG PCQ S + R DD R I +P+Y+LMENV +L
Sbjct: 65 DIDLICGGFPCQSFSIAGKRRG----FDDVRGTLFFEIARIAAVKRPRYLLMENVPGLLS 120
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
D+ L L + Y + ++ + +G+PQ R R
Sbjct: 121 HDQGRTFEIILQTLDELGYDVAWQVLNSADFGVPQARKR 159
>gi|159899163|ref|YP_001545410.1| C-5 cytosine-specific DNA methylase [Herpetosiphon aurantiacus DSM
785]
gi|159892202|gb|ABX05282.1| C-5 cytosine-specific DNA methylase [Herpetosiphon aurantiacus DSM
785]
Length = 362
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+D+ GGPPCQ S + + L D R I F+ + L P Y L+ENV +
Sbjct: 216 LDLSYGGPPCQSFSQAGKQKG----LSDPRGNLIYEFIRFLSDLNPNYFLLENVKGLQGI 271
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ L + + + Y FG++ A YG PQ R R
Sbjct: 272 NNGQLLHLIIDDIRKLGYNVTFGVVNAADYGTPQLRKR 309
>gi|261203805|ref|XP_002629116.1| DNA methyltransferase Dim-2 [Ajellomyces dermatitidis SLH14081]
gi|239586901|gb|EEQ69544.1| DNA methyltransferase Dim-2 [Ajellomyces dermatitidis SLH14081]
gi|239608866|gb|EEQ85853.1| DNA methyltransferase Dim-2 [Ajellomyces dermatitidis ER-3]
Length = 1233
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
GDV+VI G PCQG S N +N + + + + I V+F +P+Y ++ENV+ +
Sbjct: 735 GDVEVISAGSPCQGYSNVNNRKN--NAVSMQNSSMIASVASYVDFYRPQYAILENVIAMS 792
Query: 482 -KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ K + L V M YQAR + A +G PQ R R
Sbjct: 793 NRTHKRNPLCQLLCTFVGMGYQARVLNLDAWSFGAPQSRSR 833
>gi|226228975|ref|YP_002763081.1| putative DNA methyltransferase [Gemmatimonas aurantiaca T-27]
gi|226092166|dbj|BAH40611.1| putative DNA methyltransferase [Gemmatimonas aurantiaca T-27]
Length = 407
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G VDV+ GGPPCQG S N + P +N+ E ++P +V++ENV +L
Sbjct: 144 GHVDVLIGGPPCQGHSNLNNHTRREDP----KNKLYDRMARFAELVEPTHVIIENVSAVL 199
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
DK + ++ L +KY ++ A G+PQ R R
Sbjct: 200 -HDKGRVVDRTIAHLKKLKYSIDSKVVEAVAIGVPQRRRR 238
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%)
Query: 196 PNHGPHKAELALLDLYSGCGGMSTGLCLGAKLSCTNLVTRWALDSDKSACESLKLNHPEA 255
P G + E+ ++DL+SGCG MS G+ ++ +V ALD + A + N P
Sbjct: 54 PRIGARQREVRVVDLFSGCGAMSLGIWEASRAIGARMVPVMALDFNDKALRVYEDNFPNV 113
Query: 256 QVRNEAAEDFLE 267
++ E L+
Sbjct: 114 WAISKPVESILD 125
>gi|18976421|ref|NP_577778.1| cytosine-specific DNA-methyltransferase [Pyrococcus furiosus DSM
3638]
gi|397652235|ref|YP_006492816.1| cytosine-specific DNA-methyltransferase [Pyrococcus furiosus COM1]
gi|18891953|gb|AAL80173.1| site-specific DNA-methyltransferase (cytosine-specific) [Pyrococcus
furiosus DSM 3638]
gi|393189826|gb|AFN04524.1| cytosine-specific DNA-methyltransferase [Pyrococcus furiosus COM1]
Length = 301
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 10/101 (9%)
Query: 425 DVICGGPPCQGISGYNRFRNVDSPLD----DERNRQIVIFMDIVEFLKPKYVLMENVVDI 480
DVI GGPPC+ + N R +++P D D R ++ F+ V+ +KPK +MENV I
Sbjct: 65 DVIIGGPPCEPFTAINS-RRMENPKDRLYRDPIGRLVLEFIRFVKEIKPKVFVMENVPQI 123
Query: 481 LKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ + Y + Y F I+ A YG+PQ R R
Sbjct: 124 MELED-----YLIREFDKAGYPIEFNILNALDYGVPQIRRR 159
>gi|304372874|ref|YP_003856083.1| Cytosine-specific methyltransferase [Mycoplasma hyorhinis HUB-1]
gi|304309065|gb|ADM21545.1| Cytosine-specific methyltransferase [Mycoplasma hyorhinis HUB-1]
Length = 413
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 404 RIKEFVRNGFKSKILPLPGDVDVICGGPPCQGIS-GYNRFRNVDSPLDDERNRQIVIFMD 462
++KE + N FK D+D+I GG PCQG S NR +DD RN + ++
Sbjct: 152 KVKEELYNKFKD------TDIDLIVGGFPCQGFSMAGNRV------VDDPRNSLYLEMLE 199
Query: 463 IVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
IV+ L+PK+VLMENV + + + ++ ++ YQ + + Y + Q R R
Sbjct: 200 IVKNLQPKFVLMENVQGLRTMLNGQVEQKIINDYKNIGYQINVTTLNSADYEVAQTRKR 258
>gi|302347057|ref|YP_003815355.1| putative modification methylase HhaI [Prevotella melaninogenica
ATCC 25845]
gi|302150379|gb|ADK96640.1| putative modification methylase HhaI [Prevotella melaninogenica
ATCC 25845]
Length = 453
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 421 PGDV---DVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVI--FMDIVEFLKPKYVLME 475
P D+ D+IC G PCQ S + +DE+ R + +DIV + KPKY+++E
Sbjct: 62 PKDIPAHDIICAGFPCQPFSQAGNRQG----FNDEKGRGTLFDYIIDIVAYHKPKYIILE 117
Query: 476 NVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
NV ++ D + R +L +Y + I++ +G+PQ R R
Sbjct: 118 NVSNLKGHDNGNTWRIIQEKLDEQEYSVKAEILSPHEFGIPQHRKR 163
>gi|154508844|ref|ZP_02044486.1| hypothetical protein ACTODO_01354 [Actinomyces odontolyticus ATCC
17982]
gi|153798478|gb|EDN80898.1| DNA (cytosine-5-)-methyltransferase [Actinomyces odontolyticus ATCC
17982]
Length = 355
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDE--RNRQIVIFMDIVEFLKPKYVLMENVVD 479
GD +++ GGPPCQG S V +D E R R++ F+++V+ ++P +MENV
Sbjct: 76 GDAEIVIGGPPCQGFS-------VGGKMDPEDLRIREVFHFLEVVKRVRPLVFVMENVEA 128
Query: 480 ILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ K + R + + V Y ++ A YG+PQ R R
Sbjct: 129 LATNVKWNHIREKMEQEVSGLYHTNIHVLNAADYGVPQLRRR 170
>gi|334117372|ref|ZP_08491463.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
gi|333460481|gb|EGK89089.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
Length = 420
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
++DV+ G PCQG S + R+VD P RN I F +V LKPK+ +MENV I
Sbjct: 78 EIDVVISGSPCQGFSMMGK-RDVDDP----RNSLIFHFQRLVLELKPKFFVMENVPGIAS 132
Query: 483 FDKASLGRYALSRLVHMKYQAR--FGIIAAGCYGLPQFRLR 521
+ L +S + Y+ + ++ A YG+PQ R R
Sbjct: 133 GEHKELLNILISSFMEAGYKVEENYQVLNAVHYGVPQARKR 173
>gi|318057151|ref|ZP_07975874.1| DNA-cytosine methyltransferase [Streptomyces sp. SA3_actG]
gi|318076183|ref|ZP_07983515.1| DNA-cytosine methyltransferase [Streptomyces sp. SA3_actF]
Length = 386
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 424 VDVICGGPPCQGISGYNR--FRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
VDVI GGPPCQG SG NR + +D RN+ ++ V+ +KPK ++ENV L
Sbjct: 68 VDVIMGGPPCQGFSGLNRDDLKKKPPKSEDPRNKLWREYVRAVQVIKPKIFVIENVDRFL 127
Query: 482 KFDK-ASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + A+L + Y I+ A YG+PQ R R
Sbjct: 128 RSPEYAALCAATEADGPLADYHLTEKILNAADYGVPQARRR 168
>gi|209809294|ref|YP_002264832.1| putative C-5 cytosine-specific DNA methylase [Aliivibrio
salmonicida LFI1238]
gi|208010856|emb|CAQ81257.1| putative C-5 cytosine-specific DNA methylase [Aliivibrio
salmonicida LFI1238]
Length = 387
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 6/102 (5%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G++D+I GGPPCQG S + R ++ ++D RN ++ + + V +PK L+ENV +L
Sbjct: 76 GELDLILGGPPCQGFSTH---RINNAGVNDPRNALLLRYFEFVHEFQPKAFLVENVAGLL 132
Query: 482 -KFDKASLGRYALSRLVHMKYQARF-GIIAAGCYGLPQFRLR 521
K + L ++ L Y+ F GI+ A +G+PQ R R
Sbjct: 133 WKRHEDFLNKF-LQLAAKEGYEITFCGILNAKDFGVPQNRKR 173
>gi|4033740|gb|AAC97192.1| modification methylase M.NspHI [Nostoc sp. ATCC 29106]
Length = 397
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
+V+++ GGPPCQG S + R+ P RNR F+ +V ++P YV+MENV IL
Sbjct: 127 EVNLVVGGPPCQGFSVAGK-RDPKDP----RNRLFYEFVRVVSEIRPWYVVMENVPGILT 181
Query: 483 FDKASLGRYALSRLVHMKY-QARFGIIAAGCYGLPQFRLR 521
++ + + + Y I+ + YG+PQ R R
Sbjct: 182 IQNGNVKQAIIEAFESIGYPNISVAILESADYGIPQIRPR 221
>gi|59802210|ref|YP_208922.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA 1090]
gi|240015148|ref|ZP_04722061.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae
DGI18]
gi|240017596|ref|ZP_04724136.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae
FA6140]
gi|240122219|ref|ZP_04735181.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae
PID24-1]
gi|268593717|ref|ZP_06127884.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae 35/02]
gi|268597838|ref|ZP_06132005.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA19]
gi|268683185|ref|ZP_06150047.1| site-specific DNA-methyltransferase HphI [Neisseria gonorrhoeae
SK-92-679]
gi|291042721|ref|ZP_06568462.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae DGI2]
gi|293398253|ref|ZP_06642458.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
gi|385336778|ref|YP_005890725.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae
TCDC-NG08107]
gi|2330911|gb|AAC45838.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae]
gi|59719105|gb|AAW90510.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae
FA 1090]
gi|268547106|gb|EEZ42524.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae 35/02]
gi|268551626|gb|EEZ46645.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae FA19]
gi|268623469|gb|EEZ55869.1| site-specific DNA-methyltransferase HphI [Neisseria gonorrhoeae
SK-92-679]
gi|291013155|gb|EFE05121.1| 5-methylcytosine methyltransferase [Neisseria gonorrhoeae DGI2]
gi|291611516|gb|EFF40586.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
gi|317165321|gb|ADV08862.1| putative 5-methylcytosine methyltransferase [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 333
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VD++ GGPPCQG S + + DD RN F+ IV+ ++P + +MENV +
Sbjct: 73 VDLVIGGPPCQGFSMAGKIGRTFT--DDPRNHLFKEFVRIVKIVQPYFFVMENVARLYTH 130
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + ++ Y I++A +G+PQ R R
Sbjct: 131 NSGKTRIEIIQAFQNIGYSVECKILSAADFGVPQIRSR 168
>gi|367031908|ref|XP_003665237.1| hypothetical protein MYCTH_2095291 [Myceliophthora thermophila ATCC
42464]
gi|347012508|gb|AEO59992.1| hypothetical protein MYCTH_2095291 [Myceliophthora thermophila ATCC
42464]
Length = 2146
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 12/125 (9%)
Query: 405 IKEFVRNGFKSKI---LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVI-F 460
+ + +R + K +P PG+V+ I G PC G S + L +N+ +V F
Sbjct: 1593 VDDLLRRALQGKYAENVPRPGEVEFISAGSPCPGFSLLTPDKTT---LAQVKNQSLVASF 1649
Query: 461 MDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRL----VHMKYQARFGIIAAGCYGLP 516
V+F +PKY ++ENVV I++ + + + LS+L V M YQA+ + A +G P
Sbjct: 1650 ASFVDFYRPKYGILENVVTIVQA-RHNRSQDVLSQLFCAIVGMGYQAQLVLGDAWSHGAP 1708
Query: 517 QFRLR 521
Q R R
Sbjct: 1709 QGRSR 1713
>gi|423486158|ref|ZP_17462840.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus BtB2-4]
gi|423491882|ref|ZP_17468526.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus CER057]
gi|423501326|ref|ZP_17477943.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus CER074]
gi|401153950|gb|EJQ61371.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus CER074]
gi|401158020|gb|EJQ65415.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus CER057]
gi|402439994|gb|EJV71991.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus BtB2-4]
Length = 357
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+D+I GGPPCQG S + RN + DERN ++ V F +PK ++ENV +
Sbjct: 75 IDLIIGGPPCQGFSLTGK-RNEN----DERNTLFEAMVNAVAFFQPKAFVLENVPGLATL 129
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + Y + ++ A YG+PQ R R
Sbjct: 130 YQGKAKEAIMKEFETLGYTITYKVLYAPDYGIPQIRKR 167
>gi|67924379|ref|ZP_00517809.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
gi|67853772|gb|EAM49101.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
Length = 435
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+DV+ GGPPCQG S + L+D+RN + F+ +V L+P Y ++ENV ++
Sbjct: 76 IDVVFGGPPCQGFSLMGK-----RSLEDDRNTLVKHFIRLVLELQPNYFVIENVPGMVIG 130
Query: 484 DKASLGRYALSRLVHMKYQAR--FGIIAAGCYGLPQFRLR 521
+ + YQ + + I+ + YG+PQ R R
Sbjct: 131 KQQMFLEEIFAEFAQNNYQVKPDYKILNSANYGVPQLRER 170
>gi|390434475|ref|ZP_10223013.1| DNA-cytosine methyltransferase [Pantoea agglomerans IG1]
Length = 419
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G++D+I GGPPCQG S + R D+ DD RN ++ + D VE +PK L+ENV +L
Sbjct: 90 GELDLILGGPPCQGFSSH---RINDAGKDDPRNDLLLRYFDFVEKFRPKVFLVENVPGLL 146
Query: 482 KFDKAS-LGR-YALSRL--VHMKYQARFGIIAAGCYGLPQFRLR 521
A L + ++L+ L H+ F ++ A YG+PQ R R
Sbjct: 147 WPRHAEYLNKFFSLTNLHGYHVVGHKPF-VLNARDYGVPQNRKR 189
>gi|336392213|ref|ZP_08573612.1| cytosine specific DNA methyltransferase [Lactobacillus coryniformis
subsp. torquens KCTC 3535]
Length = 349
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
DV +I GGPPCQG S + + L D RN F D+V+F+KP+ ++ENV ++L
Sbjct: 67 DVGMIIGGPPCQGFSQKGKRLS----LRDPRNYLFRYFFDVVKFVKPENFVIENVPNLLT 122
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ Y+ ++ A YG+PQ R R
Sbjct: 123 AANGYFKNEIYELFESLGYEVISDVLNAKDYGVPQARRR 161
>gi|268602423|ref|ZP_06136590.1| site-specific DNA-methyltransferase HphI [Neisseria gonorrhoeae
PID18]
gi|268586554|gb|EEZ51230.1| site-specific DNA-methyltransferase HphI [Neisseria gonorrhoeae
PID18]
Length = 315
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VD++ GGPPCQG S + + DD RN F+ IV+ ++P + +MENV +
Sbjct: 55 VDLVIGGPPCQGFSMAGKIGRTFT--DDPRNHLFKEFVRIVKIVQPYFFVMENVARLYTH 112
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + ++ Y I++A +G+PQ R R
Sbjct: 113 NSGKTRIEIIQAFQNIGYSVECKILSAADFGVPQIRSR 150
>gi|416403376|ref|ZP_11687522.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 0003]
gi|357261713|gb|EHJ10948.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 0003]
Length = 435
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+DV+ GGPPCQG S + L+D+RN + F+ +V L+P Y ++ENV ++
Sbjct: 76 IDVVFGGPPCQGFSLMGK-----RSLEDDRNTLVKHFIRLVLELQPNYFVIENVPGMVIG 130
Query: 484 DKASLGRYALSRLVHMKYQAR--FGIIAAGCYGLPQFRLR 521
+ + YQ + + I+ + YG+PQ R R
Sbjct: 131 KQQMFLEEIFAEFAQNNYQVKPDYKILNSANYGVPQLRER 170
>gi|428210295|ref|YP_007094648.1| DNA-cytosine methyltransferase [Chroococcidiopsis thermalis PCC
7203]
gi|428012216|gb|AFY90779.1| DNA-cytosine methyltransferase [Chroococcidiopsis thermalis PCC
7203]
Length = 390
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 25/122 (20%)
Query: 421 PGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI 480
PG++D++ GGPPCQ S + +V P R + F+ IVE L+P++ +MENV +
Sbjct: 82 PGEIDLVTGGPPCQPFSTAGKRGSVIDP----RGSLFMDFIRIVEQLQPRFFVMENVRGL 137
Query: 481 LKFD---------------------KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFR 519
L + S + L+ + + YQ + ++ A YG+PQ R
Sbjct: 138 LSAPIRHRPHLQRGMGYPPLEQDEMQGSALQVVLAEMKSLGYQVVYNLLEAADYGVPQNR 197
Query: 520 LR 521
R
Sbjct: 198 ER 199
>gi|378835572|ref|YP_005204848.1| cytosine-specific DNA methyltransferase [Mycoplasma hyorhinis
GDL-1]
gi|367460357|gb|AEX13880.1| cytosine-specific DNA methyltransferase [Mycoplasma hyorhinis
GDL-1]
Length = 413
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 404 RIKEFVRNGFKSKILPLPGDVDVICGGPPCQGIS-GYNRFRNVDSPLDDERNRQIVIFMD 462
++KE + N FK D+D+I GG PCQG S NR +DD RN + ++
Sbjct: 152 KVKEELYNKFKD------TDIDLIVGGFPCQGFSMAGNRV------VDDPRNSLYLEMLE 199
Query: 463 IVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
IV+ L+PK+VLMENV + + + ++ ++ YQ + + Y + Q R R
Sbjct: 200 IVKNLQPKFVLMENVQGLRTMLNGQVEQKIINDYKNIGYQINVTTLNSADYEVAQTRKR 258
>gi|406875188|gb|EKD25009.1| hypothetical protein ACD_80C00131G0012 [uncultured bacterium (gcode
4)]
Length = 356
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
DV ++ PPCQG+S + + + DERN I DI+++ Y+L+ENV L
Sbjct: 73 SDVRLLIATPPCQGLSSLWKNKVQEHYESDERNYLIFHIFDIIDYWDLDYILIENVPKFL 132
Query: 482 KFD-KASLGRYALSRLVHMKYQARF----GIIAAGCYGLPQFRLR 521
K + G + L +++ KY ++ ++ A Y +PQ R R
Sbjct: 133 KMIFPYNKGYFTLEEILNHKYSKKYEISVNVLDAKDYWVPQTRQR 177
>gi|86360841|ref|YP_472728.1| DNA (cytosine-5-)-methyltransferase [Rhizobium etli CFN 42]
gi|86284943|gb|ABC94001.1| probable DNA (cytosine-5-)-methyltransferase protein [Rhizobium
etli CFN 42]
Length = 504
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 425 DVICGGPPCQGIS--GYNRFRNV----DSPLDDERNRQIVIFMDIVEFLKPKYVLMENVV 478
DVI GGPPCQ + G ++ R + ++ D R R + ++ VE P V++ENV
Sbjct: 97 DVIVGGPPCQAFARVGRSKLREIAEHPEAFRHDSRARLYIEYLAYVEACAPLAVVIENVP 156
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
D+L +L L Y R+ ++ A YG+PQ R R
Sbjct: 157 DMLNHGGHNLAAEIGEILASKDYVVRYTLLNAAFYGVPQMRER 199
>gi|284161497|ref|YP_003400120.1| DNA-cytosine methyltransferase [Archaeoglobus profundus DSM 5631]
gi|284011494|gb|ADB57447.1| DNA-cytosine methyltransferase [Archaeoglobus profundus DSM 5631]
Length = 310
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 13/106 (12%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLD----DERNRQIVIFMDIVEFLKPKYVLMENV 477
GDVDV+ G PPC+ + N R + P D D+R + ++ F+ +V LKPK +MENV
Sbjct: 65 GDVDVLIGSPPCEPFTSVN-LRRMKKPEDRLYKDKRGQLVLHFIRLVRELKPKVFVMENV 123
Query: 478 VDILKFDKASLGRYALSRLVHM--KYQARFGIIAAGCYGLPQFRLR 521
IL+ R A+ R Y+ F ++ A YG P R R
Sbjct: 124 PQILEI------RNAIEREFRKIGVYRVYFNVLKAQNYGNPSKRTR 163
>gi|60202518|gb|AAX14650.1| BbvCI methyltransferase 1 [Brevibacillus brevis]
Length = 429
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 426 VICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDK 485
V+ GGPPCQG S N N D D RN +M V L+PK ++ENV +L K
Sbjct: 88 VVIGGPPCQGFSHSN-VNNKDP--KDPRNSLFQEYMRFVAQLRPKVCMIENVKGLLT-TK 143
Query: 486 ASLGRYALSRLVH----MKYQARFGIIAAGCYGLPQFRLR 521
+ G + ++ + Y A F ++ A +G+PQFR R
Sbjct: 144 TAKGELVIDIILREFESLGYNADFRVLNAANFGVPQFRER 183
>gi|346311660|ref|ZP_08853662.1| hypothetical protein HMPREF9452_01531 [Collinsella tanakaei YIT
12063]
gi|345900260|gb|EGX70084.1| hypothetical protein HMPREF9452_01531 [Collinsella tanakaei YIT
12063]
Length = 892
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 18/123 (14%)
Query: 409 VRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERN---RQIVIFMDIVE 465
V + +++ + +P DVD++ GG PCQ S V PL ++ V++ DI
Sbjct: 581 VLDAYEAGTIDIP-DVDMVVGGFPCQDYS-------VAKPLSQASGIVGKKGVLWWDIYR 632
Query: 466 FLK----PKYVLMENVVDILKFDKASLGR---YALSRLVHMKYQARFGIIAAGCYGLPQF 518
FL+ P+YVL+ENV +LK + GR LS + Y + ++ A YG PQ
Sbjct: 633 FLRLKNTPRYVLLENVDRLLKSPASQRGRDFAIILSCFASLGYAVEWRVVNAADYGFPQK 692
Query: 519 RLR 521
R R
Sbjct: 693 RRR 695
>gi|385871172|gb|AFI89692.1| Cytosine-specific methyltransferase [Pectobacterium sp. SCC3193]
Length = 338
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Query: 409 VRNGFKSKILPLPGDVDVICGGPPCQGIS-GYNRFRNVDSPLDDERNRQIVIFMDIVEFL 467
VR G S I P VDV+ GG PCQ S NR P D R F+ ++ +
Sbjct: 35 VRLGDISNIQNFP-HVDVVVGGYPCQSFSMAGNR-----KPSGDARTNLYKQFLRVLNIV 88
Query: 468 KPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+PKY + ENV + + S L+ YQ + ++ A YG+PQ R R
Sbjct: 89 RPKYFVAENVSGLQQLGAGSFLEQQLTAYQQAGYQVSYHLVNAREYGVPQSRKR 142
>gi|228917967|ref|NP_142059.2| modification methylase [Pyrococcus horikoshii OT3]
Length = 312
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 49/102 (48%), Gaps = 10/102 (9%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLD----DERNRQIVIFMDIVEFLKPKYVLMENVVD 479
VDVI GGPPC+ + N R + P D D R ++ F+ V LKPK +MENV
Sbjct: 73 VDVIIGGPPCEPFTAINS-RRREHPRDRLYKDPIGRLVLEFIRFVRELKPKVFVMENVPQ 131
Query: 480 ILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
I++ + RY Y F + A YG+PQ R R
Sbjct: 132 IMEVE-----RYIRREFERAGYDVYFNVFNALDYGVPQVRRR 168
>gi|456737726|gb|EMF62403.1| Putative DNA (cytosine-5-)-methyltransferase protein
[Stenotrophomonas maltophilia EPM1]
Length = 590
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 367 DPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDV 426
D + + GLNF + +E +PI+ + P + ++ G S + D+
Sbjct: 140 DADAARSHGLNF------HGGAEAHSKPIDITKTTPAEL--CMQLGLGS----IADAFDI 187
Query: 427 ICGGPPCQGIS--GYNRFRNVDSP----LDDERNRQIVIFMDIVEFLKPKYVLMENVVDI 480
+ GGPPCQ + G ++ R ++ + D R + +++ V+ +P VLMENV D+
Sbjct: 188 VVGGPPCQAFARVGRSKLREIEEHPEAFIHDPRAQLYKKYLEYVDAFQPVAVLMENVPDM 247
Query: 481 LKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L ++ L Y + ++ A YG+PQ R R
Sbjct: 248 LNHGGQNIAEETCEVLESKGYTCGYTLLNAAFYGVPQMRER 288
>gi|417321064|ref|ZP_12107604.1| putative C-5 cytosine-specific DNA methylase [Vibrio
parahaemolyticus 10329]
gi|328471744|gb|EGF42621.1| putative C-5 cytosine-specific DNA methylase [Vibrio
parahaemolyticus 10329]
Length = 392
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G++ +I GGPPCQG S + R D+ +DD RN+ ++ + D V PK L+ENV +
Sbjct: 76 GELSIILGGPPCQGFSSH---RIKDAGVDDPRNKLLLRYFDFVAAFYPKAFLVENVAGLF 132
Query: 482 -KFDKASLGRYALSRLVHMKYQARF-GIIAAGCYGLPQFRLR 521
+ K+ L R+ L Y+ F + A YG+PQ R R
Sbjct: 133 WERHKSYLTRF-LDLANANNYRIVFCNTLNAKDYGVPQNRKR 173
>gi|284928852|ref|YP_003421374.1| DNA-methyltransferase Dcm [cyanobacterium UCYN-A]
gi|284809311|gb|ADB95016.1| DNA-methyltransferase Dcm [cyanobacterium UCYN-A]
Length = 422
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
++DV+ GGPPCQG S + RN D RN I F+ +V L+PKY ++ENV +
Sbjct: 75 EIDVVFGGPPCQGFSLIGK-RNP----KDNRNNLIKHFIRLVIELQPKYFVIENVPGMAT 129
Query: 483 FDKASLGRYALSRLVHMKY--QARFGIIAAGCYGLPQFRLR 521
+ + + Y + + I+ A YG+PQ R R
Sbjct: 130 KNNQAFLEEIFDEFIANNYRIETNYKILNAANYGVPQIRKR 170
>gi|433656500|ref|YP_007273879.1| DNA-cytosine methyltransferase( ) [Vibrio parahaemolyticus BB22OP]
gi|432507188|gb|AGB08705.1| DNA-cytosine methyltransferase( ) [Vibrio parahaemolyticus BB22OP]
Length = 392
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G++ +I GGPPCQG S + R D+ +DD RN+ ++ + D V PK L+ENV +
Sbjct: 76 GELSIILGGPPCQGFSSH---RIKDAGVDDPRNKLLLRYFDFVAAFYPKAFLVENVAGLF 132
Query: 482 -KFDKASLGRYALSRLVHMKYQARF-GIIAAGCYGLPQFRLR 521
+ K+ L R+ L Y+ F + A YG+PQ R R
Sbjct: 133 WERHKSYLTRF-LDLANANNYRIVFCNTLNAKDYGVPQNRKR 173
>gi|294635767|ref|ZP_06714227.1| C-5 cytosine-specific DNA methylase family protein [Edwardsiella
tarda ATCC 23685]
gi|451964513|ref|ZP_21917777.1| putative cytosine-specific methyltransferase [Edwardsiella tarda
NBRC 105688]
gi|291090867|gb|EFE23428.1| C-5 cytosine-specific DNA methylase family protein [Edwardsiella
tarda ATCC 23685]
gi|451316633|dbj|GAC63139.1| putative cytosine-specific methyltransferase [Edwardsiella tarda
NBRC 105688]
Length = 403
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 6/103 (5%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G +D++ GGPPCQG S + R D+ DD RN ++ + D V+ L+PK L+ENV +L
Sbjct: 74 GQLDILLGGPPCQGFSSH---RINDAGKDDPRNALLIRYFDFVKNLRPKVFLVENVPGLL 130
Query: 482 KFDKASLGRYALSRLVHMKYQA---RFGIIAAGCYGLPQFRLR 521
A ++ YQ + I+ A YG+PQ R R
Sbjct: 131 WPRHAEYLNNFVALTRAHDYQIVGDQPFILNARDYGVPQSRKR 173
>gi|342882968|gb|EGU83532.1| hypothetical protein FOXB_05942 [Fusarium oxysporum Fo5176]
Length = 1335
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 405 IKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIV-IFMDI 463
++ G S +P GDVD I GG PC G++R N + +N+ +V F
Sbjct: 857 LQRLAIEGEFSDSVPPIGDVDFISGGSPC---PGFSRLTNDKTTAAQRKNQSLVAAFASC 913
Query: 464 VEFLKPKYVLMENVVDILKFDKASLGRYALSRL----VHMKYQARFGIIAAGCYGLPQFR 519
V+ +P+Y L+ENV I++ A+ + S+L V + YQA F + A G PQ R
Sbjct: 914 VDLYRPRYGLLENVPGIVQ-KTANRDQDVFSQLICAIVGLGYQAHFFFLDASACGSPQRR 972
Query: 520 LR 521
R
Sbjct: 973 SR 974
>gi|255279956|ref|ZP_05344511.1| modification methylase AgeI [Bryantella formatexigens DSM 14469]
gi|255269729|gb|EET62934.1| DNA (cytosine-5-)-methyltransferase [Marvinbryantia formatexigens
DSM 14469]
Length = 475
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VD++ GGPPCQG S NR R +D P RN F+++V L P + +MENV +
Sbjct: 172 VDIVIGGPPCQGFSMANRQRLIDDP----RNHLYKTFVEVVGKLHPAFFVMENVKGM--- 224
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
S+ ++ Y ++ A +G+PQ R R
Sbjct: 225 --QSVAEQVKDDFRNIGYTVECQVLNAKDFGVPQNRER 260
>gi|387790993|ref|YP_006256058.1| DNA-methyltransferase Dcm [Solitalea canadensis DSM 3403]
gi|379653826|gb|AFD06882.1| DNA-methyltransferase Dcm [Solitalea canadensis DSM 3403]
Length = 411
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 37/183 (20%)
Query: 371 SGKRGLNFKVH---WKGYSTSEDSWEPIEGLR-NCPERIKEF---------------VRN 411
+G GL+ +H WKG E S + + L N E F V
Sbjct: 11 AGCGGLSLGLHNAGWKGLFAIEKSPDAFKTLEYNLIENKNHFDWPSWLPKNELEIDKVLK 70
Query: 412 GFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKY 471
+K +++ L VD++ GGPPCQG S R + DD RN I ++ + + +PK
Sbjct: 71 EYKDELINLRDRVDMVAGGPPCQGFSMAGRRKE-----DDVRNGLIRSYLKFIMYTRPKI 125
Query: 472 VLMENV-------------VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQF 518
+ ENV V+ ++ K + + L + Y + +I YG+PQ
Sbjct: 126 IFFENVKGFTLQFKKNKTSVNEIRSKKKAYSELVVGVLTRLGYNVKGQMIDFSNYGIPQK 185
Query: 519 RLR 521
R R
Sbjct: 186 RTR 188
>gi|333024773|ref|ZP_08452837.1| putative DNA-cytosine methyltransferase [Streptomyces sp. Tu6071]
gi|332744625|gb|EGJ75066.1| putative DNA-cytosine methyltransferase [Streptomyces sp. Tu6071]
Length = 386
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 424 VDVICGGPPCQGISGYNR--FRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
VDVI GGPPCQG SG NR + +D RN+ ++ V+ +KPK ++ENV L
Sbjct: 68 VDVIMGGPPCQGFSGLNRDDLKKKPPKSEDPRNKLWREYVRAVQVIKPKIFVIENVDRFL 127
Query: 482 KFDK-ASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + A+L + Y ++ A YG+PQ R R
Sbjct: 128 RSPEYAALCAATEADGPLADYHLTEKVLNAADYGVPQARRR 168
>gi|228969065|ref|ZP_04129983.1| Cytosine-specific methyltransferase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|402564693|ref|YP_006607417.1| modification methylase SPRI [Bacillus thuringiensis HD-771]
gi|228790631|gb|EEM38314.1| Cytosine-specific methyltransferase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|401793345|gb|AFQ19384.1| modification methylase SPRI [Bacillus thuringiensis HD-771]
Length = 326
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 22/109 (20%)
Query: 422 GDVDVICGGPPCQGIS------GYNRFRNVDSPLDDERNRQIVIFMDIVEFLK---PKYV 472
G VDVICGG PCQ S G+ R +F +I F K P+Y+
Sbjct: 68 GQVDVICGGFPCQAFSIAGKRLGFAETRGT-------------LFFEIARFAKEIQPQYL 114
Query: 473 LMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ENV +L D + R LS L + Y A + ++ + +G+PQ R R
Sbjct: 115 FLENVKGLLNHDGGNTFRTILSTLDELGYDAEWQVLNSKNFGVPQNRER 163
>gi|448485280|ref|ZP_21606564.1| DNA-cytosine methyltransferase [Halorubrum arcis JCM 13916]
gi|445818256|gb|EMA68116.1| DNA-cytosine methyltransferase [Halorubrum arcis JCM 13916]
Length = 403
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 56/129 (43%), Gaps = 11/129 (8%)
Query: 396 EGLRNCPERIKEFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSP-LDDE 452
EGL PE + + +R + + G VD++ GGPPCQG F V SP D+
Sbjct: 48 EGLE--PEELTQDIRKVDNQDVTEVVGRDTVDLVAGGPPCQG------FSEVVSPDGSDD 99
Query: 453 RNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGC 512
RN V F+ V L PK L ENV + M Y + ++ A
Sbjct: 100 RNHLFVNFISWVNELDPKAALFENVRGMQNTADGKFLDAVEESFGEMGYDVSYRVVKASD 159
Query: 513 YGLPQFRLR 521
+G+PQ R R
Sbjct: 160 FGVPQQRHR 168
>gi|407072373|ref|ZP_11103211.1| cytosine specific DNA methyltransferase [Vibrio cyclitrophicus
ZF14]
Length = 391
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G++ +I GGPPCQG S + R D+ +DD RN+ ++ + D VE +PK L+ENV +
Sbjct: 74 GELQLILGGPPCQGFSSH---RIKDAGVDDPRNKLLLRYYDFVEEFQPKAFLVENVAGLF 130
Query: 482 KFDKASLGRYALSRLVHMKYQARF-GIIAAGCYGLPQFRLR 521
AS Y F + A YG PQ R R
Sbjct: 131 WKKHASYLEKFKQLAEDNGYVIHFCDTLNAKDYGTPQNRKR 171
>gi|433624345|ref|YP_007257975.1| Cytosine specific DNA methyltransferase [Mycoplasma cynos C142]
gi|429534371|emb|CCP23873.1| Cytosine specific DNA methyltransferase [Mycoplasma cynos C142]
Length = 324
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 17/162 (10%)
Query: 371 SGKRGLNFKVHWKGYSTSE--DSWEPIEGLRNCPERIKEFVRNGFKSKILP-----LPGD 423
SG GL++ G+ E + W+P N E +++ K++
Sbjct: 10 SGCGGLSYGFFQNGFDIVESVEHWQPALDTYNLNFNKNEKIKDITDPKVIKSIEERFKNT 69
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+D++ GG PCQG S + RN D D RN+ ++++E + P+ ++ENV IL F
Sbjct: 70 IDLVIGGFPCQGYSMAGK-RNPD----DHRNQLYKYTIEVIERVNPRLFVLENVKGILSF 124
Query: 484 DKASLGRYALSRLVHM----KYQARFGIIAAGCYGLPQFRLR 521
K + ++++++M Y +++ +I A +G+PQ R R
Sbjct: 125 -KENDNELVINKIINMLLEKGYYSKYILIDASNFGVPQKRER 165
>gi|420499916|ref|ZP_14998468.1| dcm Cytosine methyl transferase [Helicobacter pylori Hp P-26]
gi|393149150|gb|EJC49462.1| dcm Cytosine methyl transferase [Helicobacter pylori Hp P-26]
Length = 412
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 420 LPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLK---PKYVLMEN 476
+P + DV+ GG PCQG S N R+ ++DERN ++ +++ LK PK+ + EN
Sbjct: 68 IPNECDVLLGGFPCQGFSVANTKRS----MEDERN---FLYKELLRLLKDKQPKFFVAEN 120
Query: 477 VVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
V +L K + + + Y + ++ A YG+PQ R R
Sbjct: 121 VKGLLSMQKGQVIEMIVQDFKSLGYCVDYKLLKASDYGVPQHRER 165
>gi|385230071|ref|YP_005789987.1| site-specific DNA methylase [Helicobacter pylori Puno135]
gi|344336509|gb|AEN18470.1| site-specific DNA methylase [Helicobacter pylori Puno135]
Length = 405
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 420 LPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLK---PKYVLMEN 476
+P + DV+ GG PCQG S N R+ ++DERN ++ +++ LK PK+ + EN
Sbjct: 64 IPNECDVLLGGFPCQGFSVANTKRS----MEDERN---FLYKELLRLLKDKQPKFFVAEN 116
Query: 477 VVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
V +L K + + + Y + ++ A YG+PQ R R
Sbjct: 117 VKGLLSMQKGQVIEMIVQDFKSLGYCVDYKLLKASDYGVPQHRER 161
>gi|425790915|ref|YP_007018832.1| site-specific DNA methylase [Helicobacter pylori Aklavik86]
gi|425629230|gb|AFX89770.1| site-specific DNA methylase [Helicobacter pylori Aklavik86]
Length = 405
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 420 LPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLK---PKYVLMEN 476
+P + DV+ GG PCQG S N R+ ++DERN ++ +++ LK PK+ + EN
Sbjct: 64 IPNECDVLLGGFPCQGFSVANTKRS----MEDERN---FLYKELLRLLKDKQPKFFVAEN 116
Query: 477 VVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
V +L K + + + Y + ++ A YG+PQ R R
Sbjct: 117 VKGLLSMQKGQVIEMIVQDFKSLGYCVDYKLLKASDYGVPQHRER 161
>gi|367478095|ref|ZP_09477417.1| putative Cytosine-specific methyltransferase [Bradyrhizobium sp.
ORS 285]
gi|365269655|emb|CCD89885.1| putative Cytosine-specific methyltransferase [Bradyrhizobium sp.
ORS 285]
Length = 368
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
DV+ GGPPCQG S N+ R + DER F+D+VE + +MENV ++
Sbjct: 69 ADVVIGGPPCQGFSLLNKNR-----IGDERRALWEPFLDVVELSGARTFVMENVAELY-- 121
Query: 484 DKASLGRYALSRLV-HMKYQARFGIIAAGCYGLPQFRLR 521
+S A+ R M ++ R ++ YG+PQ R R
Sbjct: 122 --SSAEFLAIKRRAKRMGFEMRAAVLNTADYGVPQTRKR 158
>gi|385342272|ref|YP_005896143.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240149]
gi|416188268|ref|ZP_11614737.1| DNA-cytosine methyltransferase [Neisseria meningitidis M0579]
gi|325136051|gb|EGC58661.1| DNA-cytosine methyltransferase [Neisseria meningitidis M0579]
gi|325202478|gb|ADY97932.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240149]
Length = 351
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 413 FKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYV 472
F++ I +P +D + PPCQG+S + RN+ +D+RN I ++ + +P +V
Sbjct: 58 FQNLIQSVPNRLDFLIASPPCQGMSVAGKNRNIQEMANDKRNHLIFRVIEFILLKRPTFV 117
Query: 473 LMENVVDILKFDKASLG-----RYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L+ENV LK G L L +Y + I + YG+ Q R R
Sbjct: 118 LIENVPFFLKIKLPYKGTLQTVEVILQDLFGCEYYIQTHIFDSADYGVAQHRKR 171
>gi|223939324|ref|ZP_03631204.1| DNA-cytosine methyltransferase [bacterium Ellin514]
gi|223892037|gb|EEF58518.1| DNA-cytosine methyltransferase [bacterium Ellin514]
Length = 374
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 11/122 (9%)
Query: 405 IKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
IK+ +R + S++ L G + ++ GGPPCQG S N D+RNR + ++ V
Sbjct: 45 IKKVIRK-YPSELKKLAGKITLVAGGPPCQGFSV-----NGKRQEKDQRNRLVKSYVAFV 98
Query: 465 EFLKPKYVLMENVVDI-LKFDKASLGRYALSR----LVHMKYQARFGIIAAGCYGLPQFR 519
+ +KPK +L ENV ++F K G + L + Y +I YG+PQ R
Sbjct: 99 KIVKPKLLLFENVRGFTMEFAKNGSGEIYSDKVCKLLRKLGYDVFADVIDFAGYGVPQRR 158
Query: 520 LR 521
R
Sbjct: 159 RR 160
>gi|440730741|ref|ZP_20910812.1| C-5 cytosine-specific family DNA methylase [Xanthomonas translucens
DAR61454]
gi|440377203|gb|ELQ13853.1| C-5 cytosine-specific family DNA methylase [Xanthomonas translucens
DAR61454]
Length = 344
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 421 PGDVDVICGGPPCQGISGYNRFRNVDSP--LDDERNRQIV-IFMDIVEFLKPKYVLMENV 477
PG+VD++ GGPPC S +RF + P LDD R+ V ++ +++ KPK L+ENV
Sbjct: 70 PGEVDLLVGGPPCPAFS-KSRFYRTEKPRALDDPVARETVGGYLRVLKESKPKAFLLENV 128
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ Y L + Y+ +I A YG+PQ R R
Sbjct: 129 KGLAYGVHKEALDYILDTAQKLGYKTSVCLINAADYGVPQIRER 172
>gi|420462193|ref|ZP_14960978.1| dcm Cytosine methyl transferase [Helicobacter pylori Hp H-3]
gi|393079057|gb|EJB79791.1| dcm Cytosine methyl transferase [Helicobacter pylori Hp H-3]
Length = 409
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 420 LPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLK---PKYVLMEN 476
+P + DV+ GG PCQG S N R+ ++DERN ++ +++ LK PK+ + EN
Sbjct: 68 IPNECDVLLGGFPCQGFSVANTKRS----MEDERN---FLYKELLRLLKDKQPKFFVAEN 120
Query: 477 VVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
V +L K + + + Y + ++ A YG+PQ R R
Sbjct: 121 VKGLLSMQKGQVIEMIVQDFKSLGYCVDYKLLKASDYGVPQHRER 165
>gi|374636771|ref|ZP_09708323.1| DNA-cytosine methyltransferase [Methanotorris formicicus Mc-S-70]
gi|373557969|gb|EHP84341.1| DNA-cytosine methyltransferase [Methanotorris formicicus Mc-S-70]
Length = 356
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 402 PERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYN---RFRNVDSPLDDERNRQIV 458
P I E +R IL + VDV+ GGPPC+ +G N R D DE R ++
Sbjct: 92 PVVINEDIREIHSYDILKICKKVDVVIGGPPCEAYTGANPNREKRPFDRLYKDEMGRLVL 151
Query: 459 IFMDIVEFLKPKYVLMENVVDILKFD-KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQ 517
++ IV L+P+ +MENV IL+ D + S+ R + Y F I+ A YG P
Sbjct: 152 EYIRIVGDLQPEIFVMENVPGILEEDIRESIER----EFKKVGYDVYFNILRAEDYGNPS 207
Query: 518 FRLR 521
R R
Sbjct: 208 SRRR 211
>gi|229585366|ref|YP_002843868.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.16.27]
gi|228020416|gb|ACP55823.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.16.27]
Length = 325
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Query: 405 IKEFVRNGFKSKILPLPGD-VDVICGGPPCQGISGYNRFRNVDSPLD----DERNRQIVI 459
I++ +R +IL GD +DVI GGPPC+G + N R D PLD D+R +
Sbjct: 51 IEDDIRQISGKEILKNVGDEIDVIIGGPPCEGYTAANPLRMQD-PLDRLYLDQRGSLTLE 109
Query: 460 FMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKY-QARFGIIAAGCYGLPQF 518
F+ IV+ LKPK +MENV I+ + SL ++ Y F I+ A YG P
Sbjct: 110 FIRIVDELKPKIFVMENVPAII--ETQSLRDALINEFKRAGYNNIFFNILHAEDYGNPSK 167
Query: 519 RLR 521
R R
Sbjct: 168 RNR 170
>gi|336063775|ref|YP_004558634.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pasteurianus
ATCC 43144]
gi|334281975|dbj|BAK29548.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pasteurianus
ATCC 43144]
Length = 394
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
Query: 416 KILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLME 475
K+ L G VD+I GGPPCQG S + +N +D RN+ + +++ V+ ++P+ + E
Sbjct: 72 KLKTLRGSVDLIVGGPPCQGFSMAGKRKN-----NDVRNQLMHSYVNFVKLIQPEMLFFE 126
Query: 476 NV----VDILKFDK-ASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
NV VD DK + + L + Y F +I +G+PQ R R
Sbjct: 127 NVQGFTVDFKINDKIKNYSSILVENLESLGYIVNFQMIKMSDFGVPQNRKR 177
>gi|308184574|ref|YP_003928707.1| site-specific DNA methylase [Helicobacter pylori SJM180]
gi|308060494|gb|ADO02390.1| site-specific DNA methylase [Helicobacter pylori SJM180]
Length = 405
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 420 LPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLK---PKYVLMEN 476
+P + DV+ GG PCQG S N R+ ++DERN ++ +++ LK PK+ + EN
Sbjct: 64 IPNECDVLLGGFPCQGFSVANTKRS----MEDERN---FLYKELLRLLKDKQPKFFVAEN 116
Query: 477 VVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
V +L K + + + Y + ++ A YG+PQ R R
Sbjct: 117 VKGLLSIQKGQVIEMIVQDFKSLGYCVDYKLLKASDYGVPQHRER 161
>gi|386748708|ref|YP_006221916.1| DNA (cytosine-5-)-methyltransferase [Helicobacter cetorum MIT
99-5656]
gi|384554950|gb|AFI06706.1| DNA (cytosine-5-)-methyltransferase [Helicobacter cetorum MIT
99-5656]
Length = 317
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G D++ GG PCQ S + DD+R +I+E KPK V++ENV +++
Sbjct: 59 GKHDILIGGFPCQPFSTLGALKG----FDDKRGTLFFTICEIIEKHKPKMVVLENVKNLI 114
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+K + L L + YQ + I+ +GLPQ R R
Sbjct: 115 NHNKGETFKRILFELDRLNYQVNYEILNTLDFGLPQQRNR 154
>gi|416172879|ref|ZP_11608835.1| DNA-cytosine methyltransferase [Neisseria meningitidis OX99.30304]
gi|325129892|gb|EGC52695.1| DNA-cytosine methyltransferase [Neisseria meningitidis OX99.30304]
Length = 335
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 413 FKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYV 472
F++ I +P +D + PPCQG+S + RN+ +D+RN I ++ + +P +V
Sbjct: 42 FQNLIQSVPNRLDFLIASPPCQGMSVAGKNRNIQEMANDKRNHLIFRVIEFILLKRPTFV 101
Query: 473 LMENVVDILKFDKASLG-----RYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L+ENV LK G L L +Y + I + YG+ Q R R
Sbjct: 102 LIENVPFFLKIKLPYKGTLQTVEVILQDLFGCEYYIQTHIFDSADYGVAQHRKR 155
>gi|294673665|ref|YP_003574281.1| prophage PRU01 DNA methylase, C-5 cytosine-specific family
[Prevotella ruminicola 23]
gi|294471747|gb|ADE81136.1| prophage PRU01, DNA methylase, C-5 cytosine-specific family
[Prevotella ruminicola 23]
Length = 330
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 392 WEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDD 451
WE E + I+ +RN +S P DVD I GGPPCQ S R ++ D
Sbjct: 35 WETFEANHPKTKLIRGDIRNIKESD---FPKDVDGIIGGPPCQSWSEAGSLRGIE----D 87
Query: 452 ERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAG 511
R + ++ I++ +KPK+ L ENV +L + + L+ Y ++ A
Sbjct: 88 ARGQLFFDYIRILQEVKPKFFLAENVSGMLADRHSGAVQNILNMFKESGYNVSLTLVNAK 147
Query: 512 CYGLPQFRLR 521
YG+ Q R R
Sbjct: 148 DYGVAQERKR 157
>gi|15676623|ref|NP_273767.1| modification methylase HgaI-1 [Neisseria meningitidis MC58]
gi|385328063|ref|YP_005882366.1| modification methylase HgaI-1 [Neisseria meningitidis alpha710]
gi|385851609|ref|YP_005898124.1| DNA-cytosine methyltransferase [Neisseria meningitidis M04-240196]
gi|385853586|ref|YP_005900100.1| DNA-cytosine methyltransferase [Neisseria meningitidis H44/76]
gi|385856881|ref|YP_005903393.1| DNA-cytosine methyltransferase [Neisseria meningitidis NZ-05/33]
gi|416183878|ref|ZP_11612784.1| DNA-cytosine methyltransferase [Neisseria meningitidis M13399]
gi|416197447|ref|ZP_11618657.1| DNA-cytosine methyltransferase [Neisseria meningitidis CU385]
gi|416214014|ref|ZP_11622677.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240013]
gi|427828438|ref|ZP_18995454.1| modification methylase HgaIA [Neisseria meningitidis H44/76]
gi|433464707|ref|ZP_20422192.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM422]
gi|433473129|ref|ZP_20430493.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 97021]
gi|433481678|ref|ZP_20438943.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2006087]
gi|433483664|ref|ZP_20440892.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2002038]
gi|433485863|ref|ZP_20443064.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 97014]
gi|433487958|ref|ZP_20445126.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis M13255]
gi|433490075|ref|ZP_20447205.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM418]
gi|433504574|ref|ZP_20461514.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 9506]
gi|433506745|ref|ZP_20463658.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 9757]
gi|433508900|ref|ZP_20465773.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 12888]
gi|433510991|ref|ZP_20467823.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 4119]
gi|5578896|emb|CAB51245.1| m5C-methyltransferase [Neisseria meningitidis]
gi|7225952|gb|AAF41138.1| modification methylase HgaI-1 [Neisseria meningitidis MC58]
gi|308388915|gb|ADO31235.1| modification methylase HgaI-1 [Neisseria meningitidis alpha710]
gi|316983707|gb|EFV62688.1| modification methylase HgaIA [Neisseria meningitidis H44/76]
gi|325133760|gb|EGC56416.1| DNA-cytosine methyltransferase [Neisseria meningitidis M13399]
gi|325140119|gb|EGC62648.1| DNA-cytosine methyltransferase [Neisseria meningitidis CU385]
gi|325144071|gb|EGC66379.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240013]
gi|325200590|gb|ADY96045.1| DNA-cytosine methyltransferase [Neisseria meningitidis H44/76]
gi|325206432|gb|ADZ01885.1| DNA-cytosine methyltransferase [Neisseria meningitidis M04-240196]
gi|325207770|gb|ADZ03222.1| DNA-cytosine methyltransferase [Neisseria meningitidis NZ-05/33]
gi|432204194|gb|ELK60239.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM422]
gi|432210730|gb|ELK66686.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 97021]
gi|432217509|gb|ELK73377.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2006087]
gi|432221367|gb|ELK77177.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2002038]
gi|432222909|gb|ELK78691.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 97014]
gi|432224424|gb|ELK80189.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis M13255]
gi|432228650|gb|ELK84348.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis NM418]
gi|432242089|gb|ELK97613.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 9506]
gi|432242810|gb|ELK98326.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 9757]
gi|432247714|gb|ELL03149.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 12888]
gi|432248482|gb|ELL03907.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 4119]
Length = 352
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 413 FKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYV 472
F++ I +P +D + PPCQG+S + RN+ +D+RN I ++ + +P +V
Sbjct: 59 FQNLIQSVPNRLDFLIASPPCQGMSVAGKNRNIQEMANDKRNHLIFRVIEFILLKRPTFV 118
Query: 473 LMENVVDILKFDKASLG-----RYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L+ENV LK G L L +Y + I + YG+ Q R R
Sbjct: 119 LIENVPFFLKIKLPYKGTLQTVEVILQDLFGCEYYIQTHIFDSADYGVAQHRKR 172
>gi|421562950|ref|ZP_16008772.1| cytosine-specific methyltransferase [Neisseria meningitidis NM2795]
gi|421906523|ref|ZP_16336416.1| Type II methyltransferase HgaI [Neisseria meningitidis alpha704]
gi|393292271|emb|CCI72356.1| Type II methyltransferase HgaI [Neisseria meningitidis alpha704]
gi|402341657|gb|EJU76830.1| cytosine-specific methyltransferase [Neisseria meningitidis NM2795]
Length = 352
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 413 FKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYV 472
F++ I +P +D + PPCQG+S + RN+ +D+RN I ++ + +P +V
Sbjct: 59 FQNLIQSVPNRLDFLIASPPCQGMSVAGKNRNIQEMANDKRNHLIFRVIEFILLKRPTFV 118
Query: 473 LMENVVDILKFDKASLG-----RYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L+ENV LK G L L +Y + I + YG+ Q R R
Sbjct: 119 LIENVPFFLKIKLPYKGTLQTVEVILQDLFGCEYYIQTHIFDSADYGVAQHRKR 172
>gi|386746056|ref|YP_006219273.1| site-specific DNA methylase [Helicobacter pylori HUP-B14]
gi|384552305|gb|AFI07253.1| site-specific DNA methylase [Helicobacter pylori HUP-B14]
Length = 405
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 420 LPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLK---PKYVLMEN 476
+P + DV+ GG PCQG S N R+ ++DERN ++ +++ LK PK+ + EN
Sbjct: 64 IPNECDVLLGGFPCQGFSVANTKRS----MEDERN---FLYKELLRLLKDKQPKFFVAEN 116
Query: 477 VVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
V +L K + + + Y + ++ A YG+PQ R R
Sbjct: 117 VKGLLSIQKGQVIEMIVQDFKSLGYCVDYKLLKASDYGVPQHRER 161
>gi|333375367|ref|ZP_08467179.1| modification methylase HphIA [Kingella kingae ATCC 23330]
gi|332970699|gb|EGK09680.1| modification methylase HphIA [Kingella kingae ATCC 23330]
Length = 149
Score = 55.5 bits (132), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+DVI GGPPCQG S + +DDERN+ F++ V F +PK LMENV +++
Sbjct: 73 IDVIIGGPPCQGFSIAGK-----RMIDDERNQLYKSFVEFVRFYRPKAFLMENVPNMMSM 127
Query: 484 DKA 486
K
Sbjct: 128 GKG 130
>gi|227828127|ref|YP_002829907.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.14.25]
gi|227830834|ref|YP_002832614.1| DNA-cytosine methyltransferase [Sulfolobus islandicus L.S.2.15]
gi|229581602|ref|YP_002840001.1| DNA-cytosine methyltransferase [Sulfolobus islandicus Y.N.15.51]
gi|238620327|ref|YP_002915153.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.16.4]
gi|284998349|ref|YP_003420117.1| DNA-cytosine methyltransferase [Sulfolobus islandicus L.D.8.5]
gi|227457282|gb|ACP35969.1| DNA-cytosine methyltransferase [Sulfolobus islandicus L.S.2.15]
gi|227459923|gb|ACP38609.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.14.25]
gi|228012318|gb|ACP48079.1| DNA-cytosine methyltransferase [Sulfolobus islandicus Y.N.15.51]
gi|238381397|gb|ACR42485.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.16.4]
gi|284446245|gb|ADB87747.1| DNA-cytosine methyltransferase [Sulfolobus islandicus L.D.8.5]
Length = 325
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Query: 405 IKEFVRNGFKSKILPLPGD-VDVICGGPPCQGISGYNRFRNVDSPLD----DERNRQIVI 459
I++ +R +IL GD +DVI GGPPC+G + N R D PLD D+R +
Sbjct: 51 IEDDIRQISGKEILKNVGDEIDVIIGGPPCEGYTAANPLRMQD-PLDRLYLDQRGSLTLE 109
Query: 460 FMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKY-QARFGIIAAGCYGLPQF 518
F+ IV+ LKPK +MENV I+ + SL ++ Y F I+ A YG P
Sbjct: 110 FIRIVDELKPKIFVMENVPAII--ETQSLRDALINEFKRAGYNNIFFNILHAEDYGNPSK 167
Query: 519 RLR 521
R R
Sbjct: 168 RNR 170
>gi|119355930|ref|YP_910574.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides DSM
266]
gi|119353279|gb|ABL64150.1| DNA-cytosine methyltransferase [Chlorobium phaeobacteroides DSM
266]
Length = 371
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
+V + CG PCQ + D+ DD R ++ F DIV P+ V +ENV + K
Sbjct: 80 EVKLFCGCAPCQPFTKQKTNTKKDAASDDRRGL-LIYFSDIVHACLPELVFVENVPGLQK 138
Query: 483 FDKASLGRYAL--SRLVHMKYQARFGIIAAGCYGLPQFRLR 521
F G A+ SRL Y F +IAA YG PQ R R
Sbjct: 139 FSLEDGGPLAMFISRLKQNDYFVDFDVIAAQDYGSPQVRRR 179
>gi|238751088|ref|ZP_04612584.1| Modification methylase FnuDI [Yersinia rohdei ATCC 43380]
gi|238710778|gb|EEQ03000.1| Modification methylase FnuDI [Yersinia rohdei ATCC 43380]
Length = 362
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 409 VRNGFKSKILPLPGDVDVICGGPPCQGIS-GYNRFRNVDSPLDDERNRQIVIFMDIVEFL 467
+R G S I P VDV+ GG PCQ S NR P D R+ F+ ++ +
Sbjct: 58 IRLGDISNIQSFPC-VDVVVGGYPCQSFSMAGNR-----KPDSDARSNLYKQFLRVLNIV 111
Query: 468 KPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+PKY + ENV + + S L+ YQ + ++ A YG+PQ R R
Sbjct: 112 RPKYFVAENVSGLQQLGAGSFLEQQLTAYQQAGYQVSYHLVNAKEYGVPQSRKR 165
>gi|392597870|gb|EIW87192.1| S-adenosyl-L-methionine-dependent methyltransferase [Coniophora
puteana RWD-64-598 SS2]
Length = 1113
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 19/114 (16%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
++D I G PCQ S N ++ D + ++ + V+++KPKY++ ENV L
Sbjct: 694 EIDCIVAGFPCQPHSRMNMYQRTT----DSKTYLMLNLLSWVDYIKPKYIMFENVRGFLS 749
Query: 483 FDKAS-------------LG--RYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
F + +G ++ + L M YQ RF ++ A YG PQ R+R
Sbjct: 750 FRLRARQKNRHTITGGIEMGGLKFLIRALTEMDYQCRFAVLQAAHYGTPQGRVR 803
>gi|453084864|gb|EMF12908.1| S-adenosyl-L-methionine-dependent methyltransferase [Mycosphaerella
populorum SO2202]
Length = 1034
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 412 GFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVI-FMDIVEFLKPK 470
G S I+ PG + VI G PCQG S ++++ D +RN +V + V+ P+
Sbjct: 679 GESSDIVAEPGSIHVISAGSPCQGFSNLQQYKDSDR---SKRNASMVASVISYVDLYAPR 735
Query: 471 YVLMENVVDILKFDKASLGRYALSR----LVHMKYQARFGIIAAGCYGLPQFRLR 521
Y+++ENV+ + K G+ S+ LV + YQ + ++ A YG Q R R
Sbjct: 736 YLILENVIAMTTSIKEHGGQNVFSQMIAALVGLGYQVQQFLMDAYYYGSSQARSR 790
>gi|296329951|ref|ZP_06872435.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305676676|ref|YP_003868348.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296152990|gb|EFG93855.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305414920|gb|ADM40039.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 488
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 57/130 (43%), Gaps = 22/130 (16%)
Query: 414 KSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPL-----DDERNRQIVIFMDIVEFLK 468
K +I GD+DV+ GGPPCQ S R+ + +D RN F++IV +LK
Sbjct: 67 KKEIFQSCGDIDVVIGGPPCQTFSLAGPARSGTKEMREKLKNDPRNTLYKHFIEIVNYLK 126
Query: 469 PKYVLMENV-----------------VDILKFDKASLGRYALSRLVHMKYQARFGIIAAG 511
P +V+ ENV V +++ L S V RF ++ A
Sbjct: 127 PIFVVFENVEGMLSKKVDHEGVENKQVQVIELICDELESKGYSTKVENSLSERFQVLNAA 186
Query: 512 CYGLPQFRLR 521
+G+PQ R R
Sbjct: 187 DFGVPQHRRR 196
>gi|452963418|gb|EME68488.1| DNA-cytosine methyltransferase [Magnetospirillum sp. SO-1]
Length = 497
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 425 DVICGGPPCQGIS--GYNRFRNV-DSP---LDDERNRQIVIFMDIVEFLKPKYVLMENVV 478
D+I GGPPCQ + G ++ R V D P D R R + ++D V+ P V+MENV
Sbjct: 95 DIIVGGPPCQAFARVGRSKLREVADHPEAFRHDPRARLYIDYLDYVDICVPVAVVMENVP 154
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
D+L ++ L Y + ++ + YG+PQ R R
Sbjct: 155 DMLNHGGHNIAEEVAEVLDSRGYACGYTLLNSAFYGVPQMRER 197
>gi|428319250|ref|YP_007117132.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
gi|428242930|gb|AFZ08716.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
Length = 420
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
++DV+ G PCQG S + R+VD P RN I F +V LKPK+ +MENV I
Sbjct: 78 EIDVVISGSPCQGFSMMGK-RDVDDP----RNSLIFHFQRLVLELKPKFFVMENVPGIAS 132
Query: 483 FDKASLGRYALSRLVHMKYQAR--FGIIAAGCYGLPQFRLR 521
+ L +S + Y+ + ++ A YG+PQ R R
Sbjct: 133 GEHKELLNILISSFLKCGYKVEENYQVLNAVNYGVPQARKR 173
>gi|229579730|ref|YP_002838129.1| DNA-cytosine methyltransferase [Sulfolobus islandicus Y.G.57.14]
gi|228010445|gb|ACP46207.1| DNA-cytosine methyltransferase [Sulfolobus islandicus Y.G.57.14]
Length = 325
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Query: 405 IKEFVRNGFKSKILPLPGD-VDVICGGPPCQGISGYNRFRNVDSPLD----DERNRQIVI 459
I++ +R +IL GD +DVI GGPPC+G + N R D PLD D+R +
Sbjct: 51 IEDDIRQISGKEILKNVGDEIDVIIGGPPCEGYTAANPLRMQD-PLDRLYLDQRGSLTLE 109
Query: 460 FMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKY-QARFGIIAAGCYGLPQF 518
F+ IV+ LKPK +MENV I+ + SL ++ Y F I+ A YG P
Sbjct: 110 FIRIVDELKPKIFVMENVPAII--ETQSLRDALINEFKRAGYNNIFFNILHAEDYGNPSK 167
Query: 519 RLR 521
R R
Sbjct: 168 RNR 170
>gi|385773806|ref|YP_005646373.1| DNA-cytosine methyltransferase [Sulfolobus islandicus HVE10/4]
gi|385776441|ref|YP_005649009.1| DNA-cytosine methyltransferase [Sulfolobus islandicus REY15A]
gi|323475189|gb|ADX85795.1| DNA-cytosine methyltransferase [Sulfolobus islandicus REY15A]
gi|323477921|gb|ADX83159.1| DNA-cytosine methyltransferase [Sulfolobus islandicus HVE10/4]
Length = 325
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
Query: 405 IKEFVRNGFKSKILPLPGD-VDVICGGPPCQGISGYNRFRNVDSPLD----DERNRQIVI 459
I++ +R +IL GD +DVI GGPPC+G + N R D PLD D+R +
Sbjct: 51 IEDDIRQISGKEILKNVGDEIDVIIGGPPCEGYTAANPLRMQD-PLDRLYLDQRGSLTLE 109
Query: 460 FMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKY-QARFGIIAAGCYGLPQF 518
F+ IV+ LKPK +MENV I+ + SL ++ Y F I+ A YG P
Sbjct: 110 FIRIVDELKPKIFVMENVPAII--ETQSLRDALINEFKRAGYNNIFFNILHAEDYGNPSK 167
Query: 519 RLR 521
R R
Sbjct: 168 RNR 170
>gi|149373126|ref|ZP_01892014.1| DcmB [unidentified eubacterium SCB49]
gi|149354274|gb|EDM42843.1| DcmB [unidentified eubacterium SCB49]
Length = 349
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 73/163 (44%), Gaps = 24/163 (14%)
Query: 371 SGKRGLNFKVHWKGYST------SEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGD- 423
+G GL+ G++ ++ WE E +N P I + K I+ +P D
Sbjct: 8 AGAGGLDLGFQQAGFNVIWANEYDKEIWETYE--KNHPNTILD------KRSIVNIPADE 59
Query: 424 ---VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI 480
D I GGPPCQ S R + D+R + F+ I+E +PK+ L ENV +
Sbjct: 60 VPECDGIIGGPPCQSWSEAGAARGIK----DKRGQLFYDFIRILEAKQPKFFLAENVSGM 115
Query: 481 L--KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L K +A G L R + Y+ F ++ A Y +PQ R R
Sbjct: 116 LISKHTEALEGIKELFRNAGIGYELSFQMLNASDYNVPQDRKR 158
>gi|241661827|ref|YP_002980187.1| DNA-cytosine methyltransferase [Ralstonia pickettii 12D]
gi|240863854|gb|ACS61515.1| DNA-cytosine methyltransferase [Ralstonia pickettii 12D]
Length = 398
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 62/121 (51%), Gaps = 6/121 (4%)
Query: 403 ERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMD 462
E I E FKS+ P D++ GGPPCQG S + R + ++D RN I + +
Sbjct: 96 ENIMELSPERFKSENFPEGASCDIVLGGPPCQGFSVH---RIKGAGVNDPRNGLIHRYFE 152
Query: 463 IVEFLKPKYVLMENVVDIL-KFDKASLGRY-ALSRLVHMKYQARFGIIAAGCYGLPQFRL 520
V+ L+PK LMENV +L K L ++ A S+ V + + A YG+PQ R+
Sbjct: 153 YVKCLQPKAFLMENVPGLLWPRHKKYLNKFLAESKKVGYRIIGPLRLDARN-YGVPQRRV 211
Query: 521 R 521
R
Sbjct: 212 R 212
>gi|242237482|ref|YP_002985663.1| DNA-cytosine methyltransferase [Dickeya dadantii Ech703]
gi|242129539|gb|ACS83841.1| DNA-cytosine methyltransferase [Dickeya dadantii Ech703]
Length = 465
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 25/120 (20%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
D+D++ GGPPCQ S + ++ DER + ++D+V LKPKY ++ENV IL
Sbjct: 144 DIDLVMGGPPCQAFSTAGKRKS----FKDERGNVFLKYIDLVLELKPKYFIIENVRGILS 199
Query: 483 FD---------------------KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K + LS+L Y F + A +G PQ R R
Sbjct: 200 AALNHRPLAERGDNFPVLENDEIKGGALNFILSKLKISGYAYSFNLYNAANFGTPQIRER 259
>gi|290562147|gb|ADD38470.1| Chromobox protein homolog 5 [Lepeophtheirus salmonis]
Length = 122
Score = 55.5 bits (132), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 353 GEYEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNG 412
GEYEV +IVD+ + S + F++ WKGY ED+WE + L NCPE+I+ F+R
Sbjct: 24 GEYEVHKIVDVEINKKDGSKE----FRIRWKGYKPEEDTWEEEKNL-NCPEKIEAFMRKH 78
Query: 413 FKSK 416
KS+
Sbjct: 79 EKSQ 82
>gi|418076780|ref|ZP_12714013.1| modification methylase HhaI [Streptococcus pneumoniae GA47502]
gi|353746920|gb|EHD27578.1| modification methylase HhaI [Streptococcus pneumoniae GA47502]
Length = 366
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEF---LKPKYVLMENVV 478
G VD+ICGG PCQ S R +D R +F +I F L+PKY+ +ENV
Sbjct: 49 GSVDIICGGFPCQAFSIAGNRRG----FEDTRG---TLFFEIARFASILRPKYLFLENVK 101
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L + +S L + Y + ++ + +G+PQ R R
Sbjct: 102 GLLNHENGVTFETIISTLDELGYNVEWQVLNSKNFGVPQNRER 144
>gi|255514225|gb|EET90487.1| DNA-cytosine methyltransferase [Candidatus Micrarchaeum acidiphilum
ARMAN-2]
Length = 328
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 65/153 (42%), Gaps = 26/153 (16%)
Query: 389 EDSWEPIEGLRNCPERIKEFVRNGFKS---------------KILPLPGDVDVICGGPPC 433
E + + G+ N + F RN KS K L V+V+ GGPPC
Sbjct: 23 EAGYSILAGVDNWKPAVDTFSRNHKKSIGLEADMRSLTVGQLKTLVSEAKVNVVIGGPPC 82
Query: 434 QGIS-GYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF----DKASL 488
QG S G NR +P D RN F+ IV+ + P + +MENV +L K +
Sbjct: 83 QGFSMGGNR-----NPADP-RNSLFREFIRIVKGMAPDFFVMENVRGLLSLKLVDSKMTF 136
Query: 489 GRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
G L + Y+ + A YG+PQ R R
Sbjct: 137 GEKILHDFNSIGYRTTIHTLNAANYGVPQKRQR 169
>gi|448429916|ref|ZP_21584687.1| DNA-cytosine methyltransferase [Halorubrum tebenquichense DSM
14210]
gi|445689621|gb|ELZ41849.1| DNA-cytosine methyltransferase [Halorubrum tebenquichense DSM
14210]
Length = 403
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 55/129 (42%), Gaps = 11/129 (8%)
Query: 396 EGLRNCPERIKEFVRNGFKSKILPLPG--DVDVICGGPPCQGISGYNRFRNVDSP-LDDE 452
EGL PE + + +R I + G VD++ GGPPCQG F V SP D+
Sbjct: 48 EGLE--PEEMTQDIREVDNQDITEVVGRDTVDLVAGGPPCQG------FSEVVSPDGSDD 99
Query: 453 RNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGC 512
RN V F+ V L PK L ENV + M Y ++ A
Sbjct: 100 RNHLFVNFISWVNELDPKAALFENVRGMTNTADGKFFDAVEESFDQMGYDVTHRVVEASD 159
Query: 513 YGLPQFRLR 521
+G+PQ R R
Sbjct: 160 FGVPQHRHR 168
>gi|86151502|ref|ZP_01069717.1| type II DNA-methyltransferase [Campylobacter jejuni subsp. jejuni
260.94]
gi|85841849|gb|EAQ59096.1| type II DNA-methyltransferase [Campylobacter jejuni subsp. jejuni
260.94]
Length = 187
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+++I GGPPCQG S + + L DERN +++IV+ +KP ++ENV +++
Sbjct: 73 INMIIGGPPCQGFSSKGK----NLGLQDERNFLFKEYLEIVKIIKPDIFIIENVKNLITC 128
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + + Y+ F ++ A +G+PQ R R
Sbjct: 129 ENSYFLNEIKKEIKKLDYKLEFKVLNALDFGVPQNRQR 166
>gi|322510834|gb|ADX06148.1| putative C-5 cytosine-specific DNA methyltransferase [Organic Lake
phycodnavirus 1]
Length = 344
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 18/130 (13%)
Query: 405 IKEFVRNGFKSK--ILPLPGDV-----------DVICGGPPCQGISGYNRFRNVDSPLDD 451
I + V+ +KS ILPL GD+ D++C G PCQ S + + DD
Sbjct: 98 IDKAVKETYKSNYGILPL-GDITEIEPKNITNYDILCAGFPCQPFSQCGQHKG----FDD 152
Query: 452 ERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAG 511
+R M V++ KPK +++ENV+ +L D + Y + +I
Sbjct: 153 KRGTLFFNIMKFVDYHKPKVIILENVMGLLNHDGGKTFEKIKCDIETSNYSITYKVIKCS 212
Query: 512 CYGLPQFRLR 521
YGLPQ R R
Sbjct: 213 DYGLPQMRKR 222
>gi|288904476|ref|YP_003429697.1| DNA methylase [Streptococcus gallolyticus UCN34]
gi|288731201|emb|CBI12749.1| Putative DNA methylase [Streptococcus gallolyticus UCN34]
Length = 366
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEF---LKPKYVLMENVV 478
G VD+ICGG PCQ S R +D R +F ++ F L+PKY+ +ENV
Sbjct: 65 GRVDIICGGFPCQAFSIAGNRRG----FEDTRG---TLFFEVARFASILRPKYLFLENVK 117
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L D + L L + Y + ++ + +G+PQ R R
Sbjct: 118 GLLSHDNGTTFETILRTLDELGYDVEWQVLNSKDFGVPQNRER 160
>gi|421875759|ref|ZP_16307343.1| DNA-cytosine methyltransferase family protein [Brevibacillus
laterosporus GI-9]
gi|372455266|emb|CCF16892.1| DNA-cytosine methyltransferase family protein [Brevibacillus
laterosporus GI-9]
Length = 405
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 18/111 (16%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+DVI GGPPCQG S + R+ + P RN+ + ++ IV+ +KPKY ++ENV IL +
Sbjct: 75 IDVIVGGPPCQGFSLTGK-RDENDP----RNKLFLDYLKIVKMVKPKYFVIENVEGILSY 129
Query: 484 DKASL----GRYALSRLVH---MKYQARFG------IIAAGCYGLPQFRLR 521
L G LV K +FG ++ A YG+PQ R R
Sbjct: 130 KVKKLKGISGTIYEDELVPNIIQKETEKFGYFVEHKLLNAKDYGVPQNRPR 180
>gi|418075122|ref|ZP_12712365.1| modification methylase HhaI [Streptococcus pneumoniae GA47502]
gi|418143175|ref|ZP_12779977.1| modification methylase HhaI [Streptococcus pneumoniae GA13494]
gi|421232980|ref|ZP_15689615.1| modification methylase Rho11sI [Streptococcus pneumoniae 2080076]
gi|353752377|gb|EHD33006.1| modification methylase HhaI [Streptococcus pneumoniae GA47502]
gi|353810187|gb|EHD90440.1| modification methylase HhaI [Streptococcus pneumoniae GA13494]
gi|395592825|gb|EJG53080.1| modification methylase Rho11sI [Streptococcus pneumoniae 2080076]
Length = 360
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEF---LKPKYVLMENVV 478
G VD+ICGG PCQ S R +D R +F +I F L+PKY+ +ENV
Sbjct: 65 GSVDIICGGFPCQAFSIAGNRRG----FEDTRG---TLFFEIARFASILRPKYLFLENVK 117
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L + +S L + Y + ++ + +G+PQ R R
Sbjct: 118 GLLNHENGVTFETIISTLDELGYNVEWQVLNSKNFGVPQNRER 160
>gi|418111331|ref|ZP_12748336.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA41538]
gi|353786388|gb|EHD66799.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA41538]
Length = 396
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEF---LKPKYVLMENVV 478
G VD+ICGG PCQ S R +D R +F +I F L+PKY+ +ENV
Sbjct: 49 GSVDIICGGFPCQAFSIAGNRRG----FEDTRG---TLFFEIARFASILRPKYLFLENVK 101
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L + +S L + Y + ++ + +G+PQ R R
Sbjct: 102 GLLNHENGVTFETIISTLDELGYNVEWQVLNSKNFGVPQNRER 144
>gi|409992167|ref|ZP_11275373.1| cytosine-specific methyltransferase [Arthrospira platensis str.
Paraca]
gi|79835461|gb|ABB52090.1| Mod [Arthrospira platensis]
gi|291568828|dbj|BAI91100.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39]
gi|409936970|gb|EKN78428.1| cytosine-specific methyltransferase [Arthrospira platensis str.
Paraca]
Length = 411
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
+VD+I GGPPCQG S + + LDD RN + ++ ++ ++PKY + ENV I
Sbjct: 76 EVDLIAGGPPCQGFSHIGKRQ-----LDDPRNSLVFEYLRMIAEIQPKYFIFENVPGIAT 130
Query: 483 FDKASLGRYALSRLVHMKYQAR--FGIIAAGCYGLPQFRLR 521
++ + YQ + I+ A YG PQ R R
Sbjct: 131 GKHKRFLDEIITEFEGIGYQVKKPIKILDASEYGAPQKRKR 171
>gi|308229522|gb|ADO24174.1| M.AclI [Acinetobacter calcoaceticus]
Length = 458
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G++D++ GGPPCQG S + D+ RN+ ++D V KPK L+EN V +L
Sbjct: 188 GEIDIVIGGPPCQGFSLSGKRDKSDA-----RNKLFENYLDFVTVFKPKIALLEN-VQLL 241
Query: 482 KFDKASLGRY----ALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K G + + + + Y+ + + A YG+PQ R R
Sbjct: 242 TSMKDENGNHIKDLIIKKFQDLNYKITYFDVNAKDYGVPQSRAR 285
>gi|332710136|ref|ZP_08430089.1| DNA-methyltransferase [Moorea producens 3L]
gi|332351094|gb|EGJ30681.1| DNA-methyltransferase [Moorea producens 3L]
Length = 370
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 371 SGKRGLNFKVHWKG----YSTSEDSWEPIEGLRNC-PE-RIKEFVRNGFKSKILPLPGDV 424
SG GL+ G YST D+W ++ LRN PE ++E + LP D
Sbjct: 10 SGAGGLDIGFEMAGFQHLYSTDIDTWS-VKTLRNNRPEWDVEEADIRELSERDLP---DS 65
Query: 425 DVICGGPPCQGIS-GYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
DVI G PCQG S G NR N DERN + + + KP+++++ENV+++ +
Sbjct: 66 DVILAGVPCQGFSLGGNRKEN------DERNFLFQEVVRMAKIKKPRFIVIENVLNLRRM 119
Query: 484 DKASLGRYALSRLV-HMK---YQARFGIIAAGCYGLPQFRLR 521
+ G+ + + H K Y ++ + +G+PQ R R
Sbjct: 120 KEPKSGKPFVDVISEHFKSLGYYIKYNVFRVSGFGVPQTRRR 161
>gi|168490143|ref|ZP_02714342.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae SP195]
gi|183571468|gb|EDT91996.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae SP195]
gi|321157174|emb|CBW39159.1| Cytosine-specific DNA methyltransferase [Streptococcus phage 11865]
Length = 360
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEF---LKPKYVLMENVV 478
G VD+ICGG PCQ S R +D R +F +I F L+PKY+ +ENV
Sbjct: 65 GSVDIICGGFPCQAFSIAGNRRG----FEDTRG---TLFFEIARFASILRPKYLFLENVK 117
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L + +S L + Y + ++ + +G+PQ R R
Sbjct: 118 GLLNHENGVTFETIISTLDELGYNVEWQVLNSKNFGVPQNRER 160
>gi|343515669|ref|ZP_08752720.1| DNA-cytosine methyltransferase [Vibrio sp. N418]
gi|342797839|gb|EGU33476.1| DNA-cytosine methyltransferase [Vibrio sp. N418]
Length = 390
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 72/167 (43%), Gaps = 19/167 (11%)
Query: 371 SGKRGLNFKVHWKGY----STSEDSWEPIEGLRNCPERIKEFVR--NGFKSKILPL---- 420
+G G + H G + DS +N ER+ + + NG KI PL
Sbjct: 8 AGAGGFSLAAHQAGLDVLAAIELDSSAARTYQKNIIERLNQPTKLLNGDILKIDPLMLRE 67
Query: 421 -----PGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLME 475
G +++I GGPPCQG S + R +N +DD RN+ ++ + D VE +PK L+E
Sbjct: 68 ELGLRRGQLELILGGPPCQGFSSH-RIKNAG--VDDPRNKLLLRYYDFVEEFQPKAFLVE 124
Query: 476 NVVDILKFDKASLGRYALSRLVHMKYQARF-GIIAAGCYGLPQFRLR 521
NV + AS Y F + A YG PQ R R
Sbjct: 125 NVAGLFWKKHASYLEKFKQLAEDNGYVIHFCDTLNAKDYGAPQNRKR 171
>gi|288906872|emb|CBJ21706.1| type II DNA modification methyltransferase [Streptococcus mitis B6]
Length = 380
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEF---LKPKYVLMENVV 478
G VD+ICGG PCQ S R +D R +F +I F L+PKY+ +ENV
Sbjct: 65 GSVDIICGGFPCQAFSIAGNRRG----FEDTRG---TLFFEIARFASILRPKYLFLENVR 117
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L D + + L + Y + ++ + +G+PQ R R
Sbjct: 118 GLLNHDGGATFETIIRTLDELGYDVEWQVLNSKNFGVPQNRER 160
>gi|445113595|ref|ZP_21377620.1| DNA (cytosine-5-)-methyltransferase [Prevotella nigrescens F0103]
gi|444841017|gb|ELX68037.1| DNA (cytosine-5-)-methyltransferase [Prevotella nigrescens F0103]
Length = 349
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+DV+ GGPPCQG S + +++ P RN F+ VE KPKY ++ENV +I+
Sbjct: 67 IDVVMGGPPCQGFSQKGKRLSINDP----RNFLFKQFVRFVEEFKPKYFVLENVPNIITT 122
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ Y+ G++ A +G+PQ R R
Sbjct: 123 ANGFFRNEINGAFNALGYEVCSGVLHAVDFGVPQDRRR 160
>gi|421221549|ref|ZP_15678354.1| modification methylase Rho11sI [Streptococcus pneumoniae 2070425]
gi|395583369|gb|EJG43815.1| modification methylase Rho11sI [Streptococcus pneumoniae 2070425]
Length = 360
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEF---LKPKYVLMENVV 478
G VD+ICGG PCQ S R +D R +F +I F L+PKY+ +ENV
Sbjct: 65 GSVDIICGGFPCQAFSIAGNRRG----FEDTRG---TLFFEIARFASILRPKYLFLENVK 117
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L + +S L + Y + ++ + +G+PQ R R
Sbjct: 118 GLLNHENGVTFETIISTLDELGYNVEWQVLNSKNFGVPQNRER 160
>gi|320588321|gb|EFX00790.1| DNA methyltransferase dim-2 [Grosmannia clavigera kw1407]
Length = 1168
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 10/119 (8%)
Query: 411 NGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPK 470
G S+ +P PG+VD+I GG PCQG S + +P + + F +V+ +P
Sbjct: 717 QGRYSRAVPAPGEVDLISGGSPCQGFSVLT--SDKAAPKQYKNRSMVASFASMVDLYRPL 774
Query: 471 YVLMENVVDIL--------KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
Y ++ENV + K + + L LV + YQ + A YG PQ R R
Sbjct: 775 YGVLENVPAFVARQPRQQDKNHREDIFGQLLCALVGLGYQVAVHLGNAWAYGAPQSRQR 833
>gi|168494837|ref|ZP_02718980.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|168494899|ref|ZP_02719042.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|168494952|ref|ZP_02719095.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|168494999|ref|ZP_02719142.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|418174730|ref|ZP_12811334.1| modification methylase HhaI [Streptococcus pneumoniae GA41277]
gi|421235148|ref|ZP_15691761.1| modification methylase Rho11sI [Streptococcus pneumoniae 2061617]
gi|183575153|gb|EDT95681.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|183575203|gb|EDT95731.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|183575231|gb|EDT95759.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|183575300|gb|EDT95828.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|353834318|gb|EHE14421.1| modification methylase HhaI [Streptococcus pneumoniae GA41277]
gi|395599113|gb|EJG59296.1| modification methylase Rho11sI [Streptococcus pneumoniae 2061617]
Length = 360
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEF---LKPKYVLMENVV 478
G VD+ICGG PCQ S R +D R +F +I F L+PKY+ +ENV
Sbjct: 65 GSVDIICGGFPCQAFSIAGNRRG----FEDTRG---TLFFEIARFASILRPKYLFLENVK 117
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L + +S L + Y + ++ + +G+PQ R R
Sbjct: 118 GLLNHENGVTFETIISTLDELGYNVEWQVLNSKNFGVPQNRER 160
>gi|134097718|ref|YP_001103379.1| C-5 cytosine-specific DNA methylase [Saccharopolyspora erythraea
NRRL 2338]
gi|291006322|ref|ZP_06564295.1| C-5 cytosine-specific DNA methylase [Saccharopolyspora erythraea
NRRL 2338]
gi|133910341|emb|CAM00454.1| C-5 cytosine-specific DNA methylase [Saccharopolyspora erythraea
NRRL 2338]
Length = 248
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
DV+++ GG PCQ S Y R R + DER D+++ ++P+YVL ENV +L+
Sbjct: 68 DVELVAGGFPCQPFSTYGRRRGI----ADERW-GWPWMRDVIDAIRPRYVLAENVAALLR 122
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
A R L L H+ Y + ++ A G P R R
Sbjct: 123 DTDAF--RIILDDLSHLGYLVEWSVVPACSLGAPHTRQR 159
>gi|2894387|emb|CAA74997.1| Bpu10I (5m)cytosine-specific DNA modification methyltransferase
(C2) [Bacillus pumilus]
Length = 392
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 12/113 (10%)
Query: 415 SKILPLPGDVDVICGGPPCQG--ISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYV 472
S+I+ L VD+I GGPPCQG ++G +++ +D+ RN I+ LKP V
Sbjct: 59 SEIIKLFKGVDIITGGPPCQGFSVAGPSQYGIIDN-----RNNLIMEMYRFASILKPNLV 113
Query: 473 LMENVVDILKFD----KASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ENV IL K +L Y ++ + ++ Y+ + ++ +G+PQ R R
Sbjct: 114 ILENVKGILNGKLSPTKKALDEY-MNNMSNIGYKIKVFVLNTSDFGVPQGRQR 165
>gi|385334772|ref|YP_005888719.1| cytosine-specific methyltransferase [Mycoplasma hyopneumoniae 168]
gi|312601558|gb|ADQ90813.1| Cytosine-specific methyltransferase [Mycoplasma hyopneumoniae 168]
Length = 406
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 13/119 (10%)
Query: 404 RIKEFVRNGFKSKILPLPGDVDVICGGPPCQGIS-GYNRFRNVDSPLDDERNRQIVIFMD 462
+IK N FK + ++D+I GG PCQG S NR DD RN + +D
Sbjct: 152 KIKSEFYNHFKDQ------ELDLIAGGFPCQGFSMAGNRV------FDDPRNNLYLEMLD 199
Query: 463 IVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
IV LKPK+VLMENV + + + + Y+ + + +G+ Q R R
Sbjct: 200 IVANLKPKFVLMENVQGLRTMLSGQIEAKIIKDFEKIGYKINVATLNSADFGVAQIRKR 258
>gi|428176373|gb|EKX45258.1| hypothetical protein GUITHDRAFT_139172 [Guillardia theta CCMP2712]
Length = 311
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 74/144 (51%), Gaps = 12/144 (8%)
Query: 52 IFDLGDCAYIKGEGTQK--HIGKILEFFK-TTDGEEYFRVQWFYRAEDTVMKEAADFHDR 108
+ L DC Y+K E + +I +I + + +T G+ FR QW YR +DT + H R
Sbjct: 131 VISLLDCVYVKPEEKDQAAYIMRIRKLWGCSTTGQMKFRGQWLYRPQDTKHGSSCCLHAR 190
Query: 109 KRLFYSTVMNDNPVDCIISK--VIVAQIPP--KIGLKSNSIPSSDFYFDMEYCVEYSTFR 164
+ +F S ++NP+DC+ +K V+ PP + + PSS Y V + ++
Sbjct: 191 E-VFLSDWEDENPIDCVQTKCNVLFLDKPPTREADASDSCQPSSPLGRRFHY-VCWRSY- 247
Query: 165 TLLTGKIHDL--SLPSCTETVPTT 186
++ TG+I +L SLP +T P +
Sbjct: 248 SVHTGEIRELADSLPGRKKTNPMS 271
>gi|340518715|gb|EGR48955.1| predicted protein [Trichoderma reesei QM6a]
Length = 1044
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIV-IFMDIVEFLKPKYVLMEN 476
+PL GDVD + GG PC G++R N + +N+ +V F V+ +PKY ++EN
Sbjct: 703 VPLIGDVDFVSGGSPC---PGFSRLTNDKTTAAQRKNQSLVAAFASFVDLYRPKYGVLEN 759
Query: 477 VVDILKFDKASLGRYALSR----LVHMKYQARFGIIAAGCYGLPQFRLR 521
V ++ K R S+ LV + YQ +F + A G PQ R R
Sbjct: 760 VPGMVH-KKHDRDRDVFSQLICALVGLGYQTQFFYLDASSCGSPQRRSR 807
>gi|15897209|ref|NP_341814.1| DNA modification methylase, type II R/M system [Sulfolobus
solfataricus P2]
gi|284174455|ref|ZP_06388424.1| DNA modification methylase, type II R/M system [Sulfolobus
solfataricus 98/2]
gi|384433723|ref|YP_005643081.1| DNA-cytosine methyltransferase [Sulfolobus solfataricus 98/2]
gi|13813404|gb|AAK40604.1| DNA modification methylase, type II R/M system [Sulfolobus
solfataricus P2]
gi|261601877|gb|ACX91480.1| DNA-cytosine methyltransferase [Sulfolobus solfataricus 98/2]
Length = 325
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLD----DERNRQIVIFMDIVEFLKPKYVLMENVV 478
D+DV+ GGPPC+G + N R D PLD D+R + F+ IV+ +KPK +MENV
Sbjct: 70 DIDVVIGGPPCEGYTAANPLRMQD-PLDRLYLDQRGNLTLEFIRIVDEVKPKIFVMENVP 128
Query: 479 DILKFDKASLGRYALSRLVHMKY-QARFGIIAAGCYGLPQFRLR 521
I+ + SL ++ Y F I+ A YG P R R
Sbjct: 129 AII--ETQSLRDALINEFKKAGYGNIFFNILHAEDYGNPSKRSR 170
>gi|419467524|ref|ZP_14007404.1| modification methylase HhaI [Streptococcus pneumoniae GA05248]
gi|379542437|gb|EHZ07593.1| modification methylase HhaI [Streptococcus pneumoniae GA05248]
Length = 360
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEF---LKPKYVLMENVV 478
G VD+ICGG PCQ S R +D R +F +I F L+PKY+ +ENV
Sbjct: 65 GSVDIICGGFPCQAFSIAGNRRG----FEDTRG---TLFFEIARFASILRPKYLFLENVK 117
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L + +S L + Y + ++ + +G+PQ R R
Sbjct: 118 GLLNHENGVTFETIISTLDELGYNVEWQVLNSKNFGVPQNRER 160
>gi|404491989|ref|YP_006716095.1| DNA cytosine C5-methyltransferase, M.Sac I family [Pelobacter
carbinolicus DSM 2380]
gi|77544117|gb|ABA87679.1| DNA cytosine C5-methyltransferase, M.Sac I family [Pelobacter
carbinolicus DSM 2380]
Length = 405
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSP-LDDERNRQIVIFMDIVEFLKPKYVLMENVVDI 480
G+ ++ GGPPCQ S + D+ LDD R + ++ +++ L PK LMENV I
Sbjct: 70 GEASLLIGGPPCQPFSKAAYWVKGDTKRLDDPRADTLTAYLRVLKDLTPKAFLMENVFGI 129
Query: 481 LKFDKASLGRYALSRLVH-------MKYQARFGIIAAGCYGLPQFRLR 521
+ L R+V+ KY G++ A YG+PQ R R
Sbjct: 130 -TYKGKDEAIQLLRRIVNEINREKGTKYTFSLGVLNAANYGVPQVRER 176
>gi|326381717|ref|ZP_08203411.1| cytosine-specific methyltransferase [Gordonia neofelifaecis NRRL
B-59395]
gi|326199964|gb|EGD57144.1| cytosine-specific methyltransferase [Gordonia neofelifaecis NRRL
B-59395]
Length = 356
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 420 LPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
LP D + GGPPCQG S + RN + P RN + F IV+ L+PK ++ENV
Sbjct: 72 LPEKPDWVVGGPPCQGYSTVGK-RNREDP----RNVLFLQFRRIVKGLRPKGFMIENV-- 124
Query: 480 ILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L S + + Y+ RF ++ + +G+PQ R R
Sbjct: 125 -LGLKDMSYEQEVAESFKDLGYRVRFMVLTSAEHGVPQLRRR 165
>gi|387787193|ref|YP_006252261.1| type II DNA modification methyltransferase [Streptococcus
pneumoniae ST556]
gi|379136935|gb|AFC93726.1| type II DNA modification methyltransferase [Streptococcus
pneumoniae ST556]
Length = 412
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEF---LKPKYVLMENVV 478
G VD+ICGG PCQ S R +D R +F +I F L+PKY+ +ENV
Sbjct: 65 GSVDIICGGFPCQAFSIAGNRRG----FEDTRG---TLFFEIARFASILRPKYLFLENVK 117
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L + +S L + Y + ++ + +G+PQ R R
Sbjct: 118 GLLNHENGVTFETIISTLDELGYNVEWQVLNSKNFGVPQNRER 160
>gi|315917412|ref|ZP_07913652.1| cytosine specific DNA methyltransferase [Fusobacterium
gonidiaformans ATCC 25563]
gi|313691287|gb|EFS28122.1| cytosine specific DNA methyltransferase [Fusobacterium
gonidiaformans ATCC 25563]
Length = 358
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+DV+ GGPPCQG S + DD+RN + + E +KP+ V++ENV +L
Sbjct: 80 LDVLVGGPPCQGFSLAGKREE-----DDKRNMLYKAMVKLAERMKPRAVVLENVPGMLTL 134
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + + Y+ ++ A YG+PQ R R
Sbjct: 135 YDGAGKKRIFNDFEKLGYKMSVKVLYAPEYGVPQIRKR 172
>gi|222149028|ref|YP_002549985.1| DNA methylase [Agrobacterium vitis S4]
gi|221736013|gb|ACM36976.1| DNA methylase [Agrobacterium vitis S4]
Length = 492
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 415 SKILPLP---GDVDVICGGPPCQGIS--GYNRFRNV----DSPLDDERNRQIVIFMDIVE 465
+K L LP G DV+ G PCQ + G ++ R+V D+ +D R R F++ V
Sbjct: 86 AKDLGLPDASGAFDVLAAGLPCQAFARIGRSKLRSVAGDDDAYRNDPRARLYRRFLEYVT 145
Query: 466 FLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++P +++ENV DIL F ++ L + Y+ + ++ + YG+PQ R R
Sbjct: 146 AVQPVVIVIENVPDILNFGGHNVPEEICETLDGLGYETSYTLLNSAFYGVPQMRER 201
>gi|288929280|ref|ZP_06423125.1| modification methylase HphIA (Cytosine-specific methyltransferase
HphIA) [Prevotella sp. oral taxon 317 str. F0108]
gi|288329382|gb|EFC67968.1| modification methylase HphIA (Cytosine-specific methyltransferase
HphIA) [Prevotella sp. oral taxon 317 str. F0108]
Length = 370
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G+ +VI GGPPCQG S + +DD RN ++++V+ ++PK + ENV IL
Sbjct: 67 GEAEVIVGGPPCQGFSMAGARIRKNGFIDDPRNYLFKHYLNVVKIVRPKVFVFENVKGIL 126
Query: 482 KFDKASLGRYALSRLVH------MKYQARFGIIAAGCYGLPQFRLR 521
K + R +S + Y + + A +G+P+ R R
Sbjct: 127 SMKKGEIFREIVSAFSNPANFDGNHYFINYKTVKAIEFGVPEKRER 172
>gi|393200135|ref|YP_006461977.1| site-specific DNA methylase [Solibacillus silvestris StLB046]
gi|327439466|dbj|BAK15831.1| site-specific DNA methylase [Solibacillus silvestris StLB046]
Length = 286
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 420 LPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
G++DVICGG PCQ S + R +D R ++ ++P+YV +ENV
Sbjct: 64 FKGEIDVICGGFPCQAFSVAGKKRG----FEDTRGTLFFDAARAIKQIEPRYVFLENVKG 119
Query: 480 ILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L D +S L + Y + II + +G PQ R R
Sbjct: 120 LLNHDDGRTFGTIISTLDELGYDCEWQIINSKHHGQPQNRER 161
>gi|407004442|gb|EKE20829.1| Cytosine-specific methyltransferase [uncultured bacterium]
Length = 373
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 377 NFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGI 436
NFK + Y + IEG + E + KSK VD+I GGPPCQG
Sbjct: 165 NFKQACETYRANHKDTVLIEGDITNKKIQSEILEKSKKSK-------VDIIVGGPPCQGF 217
Query: 437 SGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRL 496
S + +DD RN F+++V+ +KPK ++ENV I+ + S
Sbjct: 218 SHAGK-----RMIDDPRNLLYKEFVNVVKKIKPKVFVLENVEGIMTINGGKTYEEVKSNF 272
Query: 497 VHMKYQARFGIIAAGCYGLPQFRLR 521
+ Y + A +G+PQ R R
Sbjct: 273 EELGYSVIGHKLHAVKFGVPQKRKR 297
>gi|355646954|ref|ZP_09054740.1| hypothetical protein HMPREF1030_03826 [Pseudomonas sp. 2_1_26]
gi|354828286|gb|EHF12411.1| hypothetical protein HMPREF1030_03826 [Pseudomonas sp. 2_1_26]
Length = 403
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G VD++ GGPPCQG S N + S +D +N I L+P ++++ENV+
Sbjct: 136 GKVDILVGGPPCQGHSDLNNY----SRRNDPKNSLYFIMARAAYVLQPSHIIIENVLGA- 190
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ DK + +S L + Y+ + G+PQ R R
Sbjct: 191 RHDKNGVVHKTISALQELGYRVEMAPVDLTVIGVPQTRRR 230
>gi|302876802|ref|YP_003845435.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|307687485|ref|ZP_07629931.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
gi|302579659|gb|ADL53671.1| DNA-cytosine methyltransferase [Clostridium cellulovorans 743B]
Length = 363
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLD--DERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
+DV+ GGPPCQG S + P D D+RN V + + E L+P+ V++ENV ++
Sbjct: 76 LDVLVGGPPCQGFS-------IAGPRDMNDKRNSLYVAMVKLAERLQPQAVVLENVPGMI 128
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + + + Y+ ++ A YG+PQ R R
Sbjct: 129 QTNGGIGAKRIIEDFKEIGYRMTPKLLYAPDYGIPQIRKR 168
>gi|443313511|ref|ZP_21043122.1| DNA-methyltransferase Dcm [Synechocystis sp. PCC 7509]
gi|442776454|gb|ELR86736.1| DNA-methyltransferase Dcm [Synechocystis sp. PCC 7509]
Length = 410
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G +D++ GGPPCQG S + ++D+RN ++ F +V L P+Y +MENV ++
Sbjct: 71 GQIDLVFGGPPCQGFSIMGK-----RLINDDRNHLVLEFCRLVIELNPRYFVMENVPGMV 125
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ ++ Y + I+ A +G+PQ R R
Sbjct: 126 TGKHKTWLNKLKNKFKLHGYHGKAQILNAADFGVPQRRKR 165
>gi|426281416|gb|AFY23862.1| DNA methyltransferase 1, partial [Schistocerca gregaria]
Length = 337
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 453 RNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGC 512
+N IV ++ ++ +P+Y ++ENV + + F ++ + + L L M YQ FGI+ AG
Sbjct: 11 KNSLIVSYLSYCDYYRPRYFILENVRNFVSFKRSMVLKLTLRCLQKMGYQCTFGILQAGN 70
Query: 513 YGLPQ 517
YG+PQ
Sbjct: 71 YGVPQ 75
>gi|379736894|ref|YP_005330400.1| cytosine-specific methyltransferase [Blastococcus saxobsidens DD2]
gi|378784701|emb|CCG04370.1| Cytosine-specific methyltransferase [Blastococcus saxobsidens DD2]
Length = 364
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 13/103 (12%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSP-LDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
DVDVI GGPPCQG F N+ S +DD RN+ +M V+ KP+ ++ENV
Sbjct: 66 DVDVIIGGPPCQG------FSNLGSKDVDDPRNQLWKQYMRFVQVAKPQVFVLENVS--- 116
Query: 482 KFDKASLGRYALSRLVH---MKYQARFGIIAAGCYGLPQFRLR 521
+F +S + L+ H Y+ G++ A YG+ Q R R
Sbjct: 117 RFRNSSEFQLLLNEADHGMIKDYELTHGVLLAADYGVAQRRPR 159
>gi|406035870|ref|ZP_11043234.1| prophage encoded DNA modification methylase [Acinetobacter parvus
DSM 16617 = CIP 108168]
Length = 475
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI--- 480
+D+I GGPPCQG S R R+ + P R+ + ++ +V ++PK +LMENV I
Sbjct: 85 IDLIAGGPPCQGFSTAGR-RDPNDP----RSTLVYDYLKVVSLVRPKIILMENVKGITYK 139
Query: 481 LKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+K D+ + S L + Y I + +G+PQ R+R
Sbjct: 140 IK-DQPATANSIKSNLAELGYLPITFIEDSSVWGVPQHRIR 179
>gi|423277412|ref|ZP_17256326.1| hypothetical protein HMPREF1203_00543 [Bacteroides fragilis HMW
610]
gi|404587161|gb|EKA91711.1| hypothetical protein HMPREF1203_00543 [Bacteroides fragilis HMW
610]
Length = 369
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 421 PGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI 480
PGD+ + GGPPCQG S N R+ D+RN+ + ++ + KP+ V MENV +
Sbjct: 139 PGDIRIFAGGPPCQGFSTANTSRSE----YDKRNQLPLRYIHYAKVCKPEVVFMENVPGL 194
Query: 481 LKFDK------ASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L K R+ Y + + A YG+PQ R R
Sbjct: 195 LSLGKKKGEQEGPFVRWIREAFDEAGYDMNYQVHDAADYGVPQRRKR 241
>gi|302900266|ref|XP_003048231.1| hypothetical protein NECHADRAFT_39810 [Nectria haematococca mpVI
77-13-4]
gi|256729163|gb|EEU42518.1| hypothetical protein NECHADRAFT_39810 [Nectria haematococca mpVI
77-13-4]
Length = 1354
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIV-IFMDIVEFLKPKYVLMEN 476
+PL GDVD I GG PC G++ N + + +N+ +V F ++ +P+Y L+EN
Sbjct: 894 VPLVGDVDFISGGSPC---PGFSLLTNDKTTITQRKNQSLVAAFGSFIDLYRPRYGLLEN 950
Query: 477 VVDILKFDKASLGRYALSRL----VHMKYQARFGIIAAGCYGLPQFRLR 521
V I++ K++ + S+L V + YQ F + A G PQ R R
Sbjct: 951 VPGIVQ-RKSNRDQDVFSQLICAIVGLGYQTHFFFLDASACGSPQRRAR 998
>gi|226293429|gb|EEH48849.1| DNA methyltransferase Dim-2 [Paracoccidioides brasiliensis Pb18]
Length = 1311
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 402 PERIK-------EFVRNGFKSK-----ILPLPGDVDVICGGPPCQGISGYNRFRNVDSPL 449
PER+K +F+ F+ K ++ GDV+ I G PCQG S N + + +
Sbjct: 780 PERVKLFLGSVNDFLLRAFQGKSEDNNLVAKLGDVEFISAGSPCQGYSSVNSCKENEVSM 839
Query: 450 DDERNRQIVIFMDIVEFLKPKYVLMENVVDIL-KFDKASLGRYALSRLVHMKYQARFGII 508
+ + I V+F +PKY ++ENV+ + + +K + L V M YQ R +
Sbjct: 840 RN--SSMIASVASYVDFFRPKYAILENVIMMSNRSNKKNPLCQLLCAFVGMGYQLRILNL 897
Query: 509 AAGCYGLPQFRLR 521
A +G PQ R R
Sbjct: 898 DAWSFGAPQSRSR 910
>gi|205360554|ref|ZP_02684441.2| modification methylase DdeI [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|417370248|ref|ZP_12141176.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|205348823|gb|EDZ35454.1| modification methylase DdeI [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|353582256|gb|EHC42962.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
Length = 394
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 425 DVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKFD 484
D+I GGPPCQG S N+ +N D D RN F+ I L P ++MENV +I+K
Sbjct: 73 DIILGGPPCQGFSIANK-KNGDH--KDPRNSLFEEFLRIGRILSPMVMIMENVPNIIK-A 128
Query: 485 KASLGRYAL----SRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K G + + L + Y I+ + +G+PQ R R
Sbjct: 129 KTKDGIFVVDIIKEELSSLGYHVYHNILESTDFGVPQIRKR 169
>gi|225862883|ref|YP_002748261.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
gi|225787129|gb|ACO27346.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
Length = 367
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
D++ I GGPPCQG S ++DERN + + +V+ + PK+ ++ENV +L
Sbjct: 71 DIEGIIGGPPCQGFSTVGT-----RDINDERNHLYLEYYRVVKEIMPKFFVIENVKGLLT 125
Query: 483 FDKASLGRYALSRLVHMKYQ-ARFGIIAAGCYGLPQFRLR 521
+ L+R + Y+ + ++ A YG+PQ R R
Sbjct: 126 LNNGMFKEDILNRFGELGYKISDPQVLNAADYGVPQNRQR 165
>gi|307941961|ref|ZP_07657314.1| modification methylase NgoPII [Roseibium sp. TrichSKD4]
gi|307774867|gb|EFO34075.1| modification methylase NgoPII [Roseibium sp. TrichSKD4]
Length = 390
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 420 LPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
+P + D++ PPCQG S +R ++D RN ++ +I++ PK ++ENV
Sbjct: 57 IPSNFDILIATPPCQGFSTAGGYR-----VNDPRNNLLINTCEIIKKESPKLAIIENVAS 111
Query: 480 ILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
I+ + L L L Y II+ +G+PQ R R
Sbjct: 112 IINIRNSPLLNIGLDILRGSGYHVEIKIISCDNFGVPQRRKR 153
>gi|160883583|ref|ZP_02064586.1| hypothetical protein BACOVA_01555 [Bacteroides ovatus ATCC 8483]
gi|423291618|ref|ZP_17270465.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus CL02T12C04]
gi|156110996|gb|EDO12741.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus ATCC 8483]
gi|392662741|gb|EIY56297.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus CL02T12C04]
Length = 417
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 420 LPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
L +D++ GGPPCQG S R + DD RN + ++ +E + PK + ENV
Sbjct: 84 LRNKIDLVAGGPPCQGFSMAGRRKE-----DDVRNHLVHSYIKFIELVHPKMLFFENVKG 138
Query: 480 ILK-FDKASLGRYALSRLV-----HMKYQARFGIIAAGCYGLPQFRLR 521
+ F K A S LV + Y+ ++ G YG+PQ R R
Sbjct: 139 FTQEFKKNKEKGIAYSHLVVEELEKLGYRTASQLVNFGDYGVPQKRTR 186
>gi|406916736|gb|EKD55687.1| hypothetical protein ACD_59C00074G0004 [uncultured bacterium]
Length = 341
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 403 ERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMD 462
E I++ N K + P V ++ G PPCQG S R N +DDERN I+ +
Sbjct: 53 EDIRKIKHNKLKRLLAGKP--VHILAGCPPCQGFSTV-RMLNKTVAIDDERNDLILEYYR 109
Query: 463 IVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ +KP +MENV + +D L + +L M Y + ++ YG+PQ R R
Sbjct: 110 FIKEIKPLTFMMENVPALKNYD---LFLTTVKKLEKMGYFIDYDVVDIQNYGVPQRRKR 165
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 10/55 (18%)
Query: 208 LDLYSGCGGMSTGLC-LGAK-LSCTNLVTRWALDSDKSACESLKLNHPEAQVRNE 260
+DL+SGCGG+S G+ GA+ ++C + DK A E K+NHPE V NE
Sbjct: 7 IDLFSGCGGLSEGMKKAGAQVIACVEI--------DKVAAECYKINHPETLVINE 53
>gi|209525992|ref|ZP_03274525.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|209493518|gb|EDZ93840.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
Length = 430
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
VD+I GGPPCQG S + + LDD RN + ++ ++ ++PKY + ENV I
Sbjct: 88 QVDLIAGGPPCQGFSHIGKRQ-----LDDPRNSLVFEYLRMIAEIQPKYFIFENVPGIAT 142
Query: 483 FDKASLGRYALSRLVHMKYQAR--FGIIAAGCYGLPQFRLR 521
++ + YQ + I+ A YG PQ R R
Sbjct: 143 GKHKRFLNELITEFEAIGYQIQKPIKILDASEYGAPQKRKR 183
>gi|227525081|ref|ZP_03955130.1| possible DNA (cytosine-5-)-methyltransferase, partial
[Lactobacillus hilgardii ATCC 8290]
gi|227087758|gb|EEI23070.1| possible DNA (cytosine-5-)-methyltransferase [Lactobacillus
hilgardii ATCC 8290]
Length = 143
Score = 54.7 bits (130), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
+V+++ G PPCQG + NR N S D RN I ++ +V+ + P++++MENV I+
Sbjct: 67 NVNLVAGCPPCQGFTQMNR-NNKRSNYKDSRNMLIQEYLRVVKIISPEFIMMENVPQIVH 125
Query: 483 FDKASLGRYALSR 495
F+K AL R
Sbjct: 126 FNKFKEMLVALKR 138
>gi|354614138|ref|ZP_09032022.1| DNA-cytosine methyltransferase [Saccharomonospora paurometabolica
YIM 90007]
gi|353221514|gb|EHB85868.1| DNA-cytosine methyltransferase [Saccharomonospora paurometabolica
YIM 90007]
Length = 653
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 422 GDVDVICGGPPCQGISGY------NRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLME 475
++DV+ GGPPCQ S +R RN DER +++++ +P V+ME
Sbjct: 116 AEIDVLAGGPPCQPFSKAGRSMIRHRVRNELRDPHDERRDLWRSYLEVIRLARPAAVVME 175
Query: 476 NVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
NV D+ + + R + L + Y ++ A Y +PQFR R
Sbjct: 176 NVPDMALDREMFILRTMVEELEQLGYSVEERVVDAWRYRVPQFRQR 221
>gi|329768652|ref|ZP_08260136.1| hypothetical protein HMPREF0428_01833 [Gemella haemolysans M341]
gi|328836366|gb|EGF86031.1| hypothetical protein HMPREF0428_01833 [Gemella haemolysans M341]
Length = 427
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 405 IKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIV 464
IKE F+ L VDVICGG PCQ S + +D R
Sbjct: 53 IKEVTNEEFRK----LRAKVDVICGGFPCQAFSIAGK----QLGFEDTRGTLFYEIARAT 104
Query: 465 EFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ +KP+Y+L+ENV ++L DK L L + Y + ++ + +G+PQ R R
Sbjct: 105 KEIKPRYLLLENVRNLLSHDKGQTFTRILKILDELGYDVEWQVLNSKNFGVPQNRER 161
>gi|330927820|ref|XP_003302014.1| hypothetical protein PTT_13685 [Pyrenophora teres f. teres 0-1]
gi|311322847|gb|EFQ89880.1| hypothetical protein PTT_13685 [Pyrenophora teres f. teres 0-1]
Length = 1252
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 416 KILPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLME 475
K++ G+VD+I G PC G S RN SP I F V+ +P Y ++E
Sbjct: 723 KLIARVGEVDLIVAGSPCPGFSSLQ--RNWKSPQSLCNASHISTFCSFVDVYRPLYGILE 780
Query: 476 NVVDILKFDKASLGRYALSR----LVHMKYQARFGIIAAGCYGLPQFRLR 521
NVV++ K + LS+ LV M YQ I+ A CY Q R R
Sbjct: 781 NVVNMSSTRKGYENQNVLSQVVASLVSMGYQVNQYIMDAWCYSSKQQRSR 830
>gi|225684039|gb|EEH22323.1| DNA methyltransferase Dim-2 [Paracoccidioides brasiliensis Pb03]
Length = 1336
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 402 PERIK-------EFVRNGFKSK-----ILPLPGDVDVICGGPPCQGISGYNRFRNVDSPL 449
PER+K +F+ F+ K ++ GDV+ I G PCQG S N + + +
Sbjct: 805 PERVKLFLGSVNDFLLRAFQGKSEDNNLVAKLGDVEFISAGSPCQGYSSVNSCKENEVSM 864
Query: 450 DDERNRQIVIFMDIVEFLKPKYVLMENVVDIL-KFDKASLGRYALSRLVHMKYQARFGII 508
+ + I V+F +PKY ++ENV+ + + +K + L V M YQ R +
Sbjct: 865 RN--SSMIASVASYVDFFRPKYAILENVIMMSNRSNKKNPLCQLLCAFVGMGYQLRILNL 922
Query: 509 AAGCYGLPQFRLR 521
A +G PQ R R
Sbjct: 923 DAWSFGAPQSRSR 935
>gi|399524187|ref|ZP_10764756.1| DNA (cytosine-5-)-methyltransferase [Atopobium sp. ICM58]
gi|398374672|gb|EJN52247.1| DNA (cytosine-5-)-methyltransferase [Atopobium sp. ICM58]
Length = 429
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 19/164 (11%)
Query: 371 SGKRGLNFKVHWKGYSTSED-SWEPIEGL---RNCPERIKEFVRN-----GFKSKILPLP 421
+G GL+ + GY + ++PI N P K F R+ G + +I
Sbjct: 15 AGAGGLSLGLEQAGYEIAAAVEYDPIHAAVHEYNFPYG-KTFARDVTGITGAEIRIKSEI 73
Query: 422 GD--VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
GD + ++ GGPPCQGIS R +DD RN + ++ +V L+P++ LMENV
Sbjct: 74 GDREIALVAGGPPCQGISLIGR-----RAIDDPRNALLKEYVRLVLELQPRHFLMENVAG 128
Query: 480 ILKFDKASLGRYALSRLVHMKYQ--ARFGIIAAGCYGLPQFRLR 521
+ L + L YQ + ++ A YG PQ R R
Sbjct: 129 LTVGKHRHLLTEVIDLLSDGGYQVLTPYRVLQAADYGTPQSRKR 172
>gi|225713022|gb|ACO12357.1| Chromobox protein homolog 5 [Lepeophtheirus salmonis]
Length = 474
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Query: 353 GEYEVARIVDICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNG 412
GEYEV +IVD+ + S + F++ WKGY ED+WE + L NCPE+I+ F+R
Sbjct: 376 GEYEVHKIVDVEINKKDGSKE----FRIRWKGYKPEEDTWEEEKNL-NCPEKIEAFMRKH 430
Query: 413 FKSK 416
KS+
Sbjct: 431 EKSQ 434
>gi|440475172|gb|ELQ43873.1| modification methylase DdeI [Magnaporthe oryzae Y34]
gi|440487101|gb|ELQ66907.1| modification methylase DdeI [Magnaporthe oryzae P131]
Length = 1289
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVI-FMDIVEFLKPKYVLMEN 476
+P G+V+ I GG PCQG S ++ D + +NR +V F V+F +PKY L+EN
Sbjct: 820 VPSRGEVEFISGGSPCQGFSLLTVNKSDDRQV---KNRSLVASFASFVDFYRPKYGLLEN 876
Query: 477 VVDILKFDKASLGRYALSR----LVHMKYQARFGIIAAGCYGLPQFRLR 521
V +++ + Y LS+ LV + YQ + + A YG PQ R R
Sbjct: 877 VTNMVNANVRPDCDY-LSQLFCALVGLGYQVQIILGDAWSYGAPQQRSR 924
>gi|422854885|ref|ZP_16901549.1| modification methylase HgiDII [Streptococcus sanguinis SK160]
gi|325696380|gb|EGD38271.1| modification methylase HgiDII [Streptococcus sanguinis SK160]
Length = 358
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 18/121 (14%)
Query: 403 ERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGIS--GYNRFRNVDSPLDDERNRQIVIF 460
+ IK+ ++ G K++ + PPCQG S G N +DERN+ + F
Sbjct: 61 DEIKQHLKIGSDDKVM--------LVACPPCQGFSTIGTNNE-------NDERNQLVFQF 105
Query: 461 MDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRL 520
+ ++ L P ++LMENVV +++ ++ + L+ ++ Y + I+ YG+PQ R
Sbjct: 106 LRLINELNPDFLLMENVVGMIRAKNKNIFKSFLTS-INNAYSVNYDIVNTADYGVPQLRK 164
Query: 521 R 521
R
Sbjct: 165 R 165
>gi|392396710|ref|YP_006433311.1| DNA-methyltransferase Dcm [Flexibacter litoralis DSM 6794]
gi|390527788|gb|AFM03518.1| DNA-methyltransferase Dcm [Flexibacter litoralis DSM 6794]
Length = 343
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL- 481
D D I GGPPCQ S + R + D+R + F+ I+E +PK+ L ENV +L
Sbjct: 62 DCDGIIGGPPCQSWSEAGKARGI----KDKRGQLFYDFIRILEEKQPKFFLAENVSGMLI 117
Query: 482 -KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K ++A G L R + Y+ F ++ A Y +PQ R R
Sbjct: 118 SKHNQALEGIKELFRNAGLGYELSFKMLNASDYNVPQDRKR 158
>gi|420417788|ref|ZP_14916883.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
gi|393030969|gb|EJB32042.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
Length = 362
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VD++ GG PCQ S L+D R ++ ++ +KPK + ENV +L+
Sbjct: 101 VDILVGGSPCQSFSSIGN----KLGLEDTRGTLFYDYIRVLNEIKPKVFIFENVYGMLRH 156
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
DK + Y ++GI+ A YG+PQ R R
Sbjct: 157 DKGKTFEVIQKAFESLDYHYKYGILDARNYGIPQGRRR 194
>gi|389640887|ref|XP_003718076.1| modification methylase DdeI [Magnaporthe oryzae 70-15]
gi|351640629|gb|EHA48492.1| modification methylase DdeI [Magnaporthe oryzae 70-15]
Length = 1294
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVI-FMDIVEFLKPKYVLMEN 476
+P G+V+ I GG PCQG S ++ D + +NR +V F V+F +PKY L+EN
Sbjct: 825 VPSRGEVEFISGGSPCQGFSLLTVNKSDDRQV---KNRSLVASFASFVDFYRPKYGLLEN 881
Query: 477 VVDILKFDKASLGRYALSR----LVHMKYQARFGIIAAGCYGLPQFRLR 521
V +++ + Y LS+ LV + YQ + + A YG PQ R R
Sbjct: 882 VTNMVNANVRPDCDY-LSQLFCALVGLGYQVQIILGDAWSYGAPQQRSR 929
>gi|418095108|ref|ZP_12732226.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA16531]
gi|353772838|gb|EHD53339.1| DNA-cytosine methyltransferase family protein [Streptococcus
pneumoniae GA16531]
Length = 244
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEF---LKPKYVLMENVV 478
G VD+ICGG PCQ S R +D R +F +I F L+PKY+ +ENV
Sbjct: 49 GSVDIICGGFPCQAFSIAGNRRG----FEDTRG---TLFFEIARFASILRPKYLFLENVK 101
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L + +S L + Y + ++ + +G+PQ R R
Sbjct: 102 GLLNHENGVTFETIISTLDELGYNVEWQVLNSKNFGVPQNRER 144
>gi|452981219|gb|EME80979.1| hypothetical protein MYCFIDRAFT_114349, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 923
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G++D+I G PCQG S R DSP + + + V+F P+Y+++ENVV +
Sbjct: 595 GEIDLISAGSPCQGFSKLQHDR--DSPRSRKNASMVASVVSFVDFYVPEYLILENVVTMT 652
Query: 482 KFDKASLG--------RYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ G +S LV + YQ + ++ + YG PQ R R
Sbjct: 653 DHPRDKKGPIPEQNVFSQVISALVGLGYQVQQFLMDSWSYGSPQQRSR 700
>gi|342732841|ref|YP_004771680.1| cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|342330296|dbj|BAK56938.1| cytosine-specific methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
Length = 375
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
+VDVI GPPCQG S ++D RN+ V + V+ +PK ++ENV +
Sbjct: 74 EVDVIIAGPPCQGFS-----LTGSRDINDSRNKLYVAVVHAVQHFRPKAFMIENVPGMAT 128
Query: 483 FDKASLGRYALSRLVHMKYQARF--GIIAAGCYGLPQFRLR 521
K ++ + ++ M Y + A YG+PQFR R
Sbjct: 129 LYKGAVKQQIINTFEDMGYAVTVTDSPLLAADYGVPQFRKR 169
>gi|420414315|ref|ZP_14913435.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|420419420|ref|ZP_14918510.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
gi|393026649|gb|EJB27746.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|393031326|gb|EJB32398.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
Length = 369
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VD++ GG PCQ S L+D R ++ ++ +KPK + ENV +L+
Sbjct: 108 VDILVGGSPCQSFSSIGN----KLGLEDTRGTLFYDYIRVLNEIKPKVFIFENVYGMLRH 163
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
DK + Y ++GI+ A YG+PQ R R
Sbjct: 164 DKGKTFEIIQKAFESLDYHYKYGILDARNYGIPQGRRR 201
>gi|340620812|ref|YP_004739263.1| MHphi(C) [Capnocytophaga canimorsus Cc5]
gi|339901077|gb|AEK22156.1| MHphi(C) [Capnocytophaga canimorsus Cc5]
Length = 358
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 72/175 (41%), Gaps = 29/175 (16%)
Query: 363 ICYGDPNESGKRGLNFKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPG 422
+ YG SG GL+ G S G+ P K F RN +K+L G
Sbjct: 1 MLYGIDIFSGAGGLSLGAEMAGIQISY-------GIEINPSAAKSFTRNHKGAKVLQ--G 51
Query: 423 DVD---------------VICGGPPCQGISGYN-RFRNVDSPLDDERNRQIVIFMDIVEF 466
D+ +I GGPPCQG S N R RN + +E+N + F+ V
Sbjct: 52 DIKDIDPSKLKKGDEPVFIIMGGPPCQGFSLSNTRTRN----MQNEKNFLFLEFVRFVRE 107
Query: 467 LKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
LKP + ++ENV + ++ + Y+ ++ A YG+PQ R R
Sbjct: 108 LKPTWFVLENVWGLTNIEEGKAKSMIEDCFRALGYEVNSQVLWASDYGVPQNRNR 162
>gi|258406639|ref|YP_003199380.1| transcriptional regulator, XRE family [Desulfohalobium retbaense
DSM 5692]
gi|257798866|gb|ACV69802.1| transcriptional regulator, XRE family [Desulfohalobium retbaense
DSM 5692]
Length = 468
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Query: 420 LPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV-- 477
L GD+DVI GGPPCQG S + R+V+ P RN ++ V+ +PK +MENV
Sbjct: 182 LIGDIDVIIGGPPCQGFSLSGK-RDVNDP----RNTLFKHYLRFVDAFRPKIAIMENVRL 236
Query: 478 VDILKFDKASLGRYALSRLVH-MKYQARFGIIAAGCYGLPQFRLR 521
+ +K + +L + + H Y + I A YG+PQ R R
Sbjct: 237 LSSMKNSEGNLVKCDIESDFHNHGYNVQSFEINAKDYGVPQHRER 281
>gi|420489567|ref|ZP_14988159.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-11]
gi|420523508|ref|ZP_15021926.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-11b]
gi|393104988|gb|EJC05539.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-11]
gi|393125857|gb|EJC26309.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-11b]
Length = 368
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VD++ GG PCQ S L+D R ++ ++ +KPK + ENV +L+
Sbjct: 107 VDILVGGSPCQSFSSIGN----KLGLEDTRGTLFYDYIRVLNEIKPKVFIFENVYGMLRH 162
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
DK + Y ++GI+ A YG+PQ R R
Sbjct: 163 DKGKTFEIIQKAFESLDYHYKYGILDARNYGIPQGRRR 200
>gi|339009559|ref|ZP_08642131.1| modification methylase SPRI [Brevibacillus laterosporus LMG 15441]
gi|338774037|gb|EGP33568.1| modification methylase SPRI [Brevibacillus laterosporus LMG 15441]
Length = 307
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G DVICGG PCQ S + + +D R M L+P+Y+ +ENV +L
Sbjct: 14 GHTDVICGGFPCQAFSVAGK----RAGFNDTRGTLFFEIMRFASILRPRYLFLENVEGLL 69
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ L L + Y A + ++ + +G+PQ R R
Sbjct: 70 NHNNGDTFETILRTLDEVGYDAEWNVLNSKNFGVPQNRAR 109
>gi|376002264|ref|ZP_09780102.1| DNA (cytosine-5-)-methyltransferase [Arthrospira sp. PCC 8005]
gi|423067964|ref|ZP_17056754.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
gi|375329355|emb|CCE15855.1| DNA (cytosine-5-)-methyltransferase [Arthrospira sp. PCC 8005]
gi|406710502|gb|EKD05713.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
Length = 423
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
VD+I GGPPCQG S + + LDD RN + ++ ++ ++PKY + ENV I
Sbjct: 88 QVDLIAGGPPCQGFSHIGKRQ-----LDDPRNSLVFEYLRMIAEIQPKYFIFENVPGIAT 142
Query: 483 FDKASLGRYALSRLVHMKYQAR--FGIIAAGCYGLPQFRLR 521
++ + YQ + I+ A YG PQ R R
Sbjct: 143 GKHKRFLNELITEFEAIGYQIQKPIKILDASEYGAPQKRKR 183
>gi|399521929|ref|ZP_10762594.1| Site-specific DNA-methyltransferase [Pseudomonas pseudoalcaligenes
CECT 5344]
gi|399109964|emb|CCH39154.1| Site-specific DNA-methyltransferase [Pseudomonas pseudoalcaligenes
CECT 5344]
Length = 544
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 25/120 (20%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
++DVI GGPPCQ S + + +DER + F+D+ ++P Y+++ENV +L
Sbjct: 216 EIDVIIGGPPCQAFSTAGKRKA----FNDERGNAFLKFIDLALEIRPPYIVIENVRGLLS 271
Query: 483 --------------FDKASLGR-------YALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
F SL + LS+L + Y + F + + +G PQ R R
Sbjct: 272 CPMDHRPHDQRGPDFPDLSLDEMKGGALNFVLSKLSNAGYASSFNLYNSANFGTPQIRER 331
>gi|308185228|ref|YP_003929361.1| DNA-cytosine methyltransferase [Helicobacter pylori SJM180]
gi|308061148|gb|ADO03044.1| DNA-cytosine methyltransferase [Helicobacter pylori SJM180]
Length = 368
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VD++ GG PCQ S L+D R ++ ++ +KPK + ENV +L+
Sbjct: 107 VDILVGGSPCQSFSSIGN----KLGLEDTRGTLFYDYIRVLNEIKPKVFIFENVYGMLRH 162
Query: 484 DKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
DK + Y ++GI+ A YG+PQ R R
Sbjct: 163 DKGKTFEIIQKAFESLDYHYKYGILDARNYGIPQGRRR 200
>gi|416221799|ref|ZP_11625950.1| DNA-cytosine methyltransferase [Moraxella catarrhalis 103P14B1]
gi|326564851|gb|EGE15057.1| DNA-cytosine methyltransferase [Moraxella catarrhalis 103P14B1]
Length = 288
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENV 477
LP G VDVI GG PCQ +S + + L +R MDIV+ LKP Y+++ENV
Sbjct: 74 LPNGGQVDVIAGGFPCQDVSVAGK----RAGLKGKRTSLFFNAMDIVDTLKPTYLVLENV 129
Query: 478 VDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++ + + + L Y + ++ + +G+PQ R R
Sbjct: 130 AGLISSNDGKDLQTVIETLAQCGYVGFWRVLDSRYFGVPQKRRR 173
>gi|171742574|ref|ZP_02918381.1| hypothetical protein BIFDEN_01687 [Bifidobacterium dentium ATCC
27678]
gi|171278188|gb|EDT45849.1| DNA binding domain, excisionase family [Bifidobacterium dentium
ATCC 27678]
Length = 481
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 14/109 (12%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI-- 480
++DV+ GGPPCQ S R D P R + ++D+ L+P+Y+++ENV +
Sbjct: 174 EIDVMFGGPPCQAFSTAGARRAFDDP----RGNCFLAYLDLASQLRPRYLIIENVRGLLS 229
Query: 481 ----LKFDKASLG----RYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
LK D A + R L +L M Y F + A YG Q R R
Sbjct: 230 TAYPLKPDGAPVHGGAMRIILDKLEAMGYGVSFQLYDAANYGAFQHRER 278
>gi|408906497|emb|CCM12282.1| DNA-cytosine methyltransferase [Helicobacter heilmannii ASB1.4]
Length = 353
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G +DV+ GGPPCQ S + R +D+ R ++ I+ + PK L ENVV +L
Sbjct: 67 GSIDVLLGGPPCQSYSTLGK-RQMDT-----RAHLFQEYLKILAAVHPKIFLFENVVGLL 120
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
L + M YQ ++ A +G+PQ R R
Sbjct: 121 SMQGGKLFHSICACFAQMGYQIYSRVLNAMHFGVPQIRQR 160
>gi|339755038|gb|AEJ95049.1| gp87 [Mycobacterium phage Gladiator]
Length = 176
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
VDV+CGG PCQ +S ++ D R+ F + + L+P+YV++ENV +L
Sbjct: 63 VDVLCGGFPCQDVSHAGLKAGIE---DGTRSGLWSYFAEAISVLRPRYVVIENVRGLLSA 119
Query: 484 DKA--------SLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
++GR L L + Y AR+ +AAG G P R R
Sbjct: 120 KATGPQGVSMRAMGRV-LGDLSDLGYDARWKTLAAGSVGAPHKRER 164
>gi|222151724|ref|YP_002560880.1| type II modification methyltransferase [Macrococcus caseolyticus
JCSC5402]
gi|222120849|dbj|BAH18184.1| type II modification methyltransferase [Macrococcus caseolyticus
JCSC5402]
Length = 413
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 24/158 (15%)
Query: 378 FKVHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSK--ILPLPG------DVDVICG 429
F+V W + WEP +++ + + G S I +P +VD+I G
Sbjct: 28 FEVTWA------NQWEPSRKVQHAFDCYSRNFKTGIHSNQDITEVPNAELAATNVDMIVG 81
Query: 430 GPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLK---PKYVLMENVVDILKFDKA 486
G PCQ Y+ R+++ L + ++ V+F +I F++ PKY+L+ENV +LK
Sbjct: 82 GFPCQD---YSVARSLNGELG-MQGKKGVLFWEITRFIQNVAPKYILLENVDRLLKSPSK 137
Query: 487 SLGR---YALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
GR LS L + Y + +I A YG Q R R
Sbjct: 138 QRGRDFGVMLSTLNELGYDVEWRVINAADYGNAQRRRR 175
>gi|410643136|ref|ZP_11353638.1| DNA (cytosine-5-)-methyltransferase [Glaciecola chathamensis S18K6]
gi|410137314|dbj|GAC11825.1| DNA (cytosine-5-)-methyltransferase [Glaciecola chathamensis S18K6]
Length = 356
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 420 LPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVD 479
L GD +I GGPPCQG S + + + L+DERN + +++ VE + P ++ENV
Sbjct: 67 LNGDKTIIIGGPPCQGFS--QKGKRIG--LNDERNFLFLKYIECVEVINPIAFVIENVPG 122
Query: 480 ILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L + + +L + Y ++ A YG+PQ R R
Sbjct: 123 LLTNEGGFFLNEIIEKLQGLGYSLFERVLNASDYGVPQNRKR 164
>gi|424068859|ref|ZP_17806308.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. avellanae
str. ISPaVe013]
gi|407996205|gb|EKG36689.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. avellanae
str. ISPaVe013]
Length = 421
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 25/156 (16%)
Query: 380 VHWKGYSTSEDSWEPIEGLRNCPERIKEFVRNGFKSKILPLPGDVDVICGGPPCQGISGY 439
+ K Y W P+ + +C ++++ N I L G VD++ GGPPCQG S
Sbjct: 43 IQGKRYKFKWPDWLPVSHM-SCEGFLEQYGNN-----ITSLSGTVDLMVGGPPCQGFSTA 96
Query: 440 NRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI-LKFDKA------------ 486
R RN D P RN+ ++++V+ + P ++++ENV KF ++
Sbjct: 97 GR-RNPDDP----RNKMAEQYLELVKRIMPSFIVIENVSGFNSKFSESKRSGSTEDRYFT 151
Query: 487 -SLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
S + L + Y G + +G+PQ R R
Sbjct: 152 QSYADFICLSLEKIGYTVSRGKVNCADFGVPQNRRR 187
>gi|367047877|ref|XP_003654318.1| hypothetical protein THITE_2155132 [Thielavia terrestris NRRL 8126]
gi|347001581|gb|AEO67982.1| hypothetical protein THITE_2155132 [Thielavia terrestris NRRL 8126]
Length = 2062
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 418 LPLPGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVI-FMDIVEFLKPKYVLMEN 476
+P PG+VD I G PC G++ + L +N+ +V F V+F +PKY ++EN
Sbjct: 1511 VPRPGEVDFISAGSPC---PGFSLLTPDKTKLVQIKNQSLVASFASFVDFYRPKYGILEN 1567
Query: 477 VVDILKFDKASLGRYALSRL----VHMKYQARFGIIAAGCYGLPQFRLR 521
V+ I++ + + LS+L V + YQA+ + A YG PQ R R
Sbjct: 1568 VITIVQ-ARHNRSEDVLSQLFCAIVGLGYQAQLILGDAWSYGAPQGRSR 1615
>gi|284989342|ref|YP_003407896.1| DNA-cytosine methyltransferase [Geodermatophilus obscurus DSM
43160]
gi|284062587|gb|ADB73525.1| DNA-cytosine methyltransferase [Geodermatophilus obscurus DSM
43160]
Length = 671
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 424 VDVICGGPPCQGISGYNRF-------RNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMEN 476
V+++ GGPPCQ S R R + P D R+ ++++V +PK V+MEN
Sbjct: 116 VELLAGGPPCQPFSKAGRSKIRDRVRRGLRDPHDQRRD-LWRSYLEVVRLAEPKAVIMEN 174
Query: 477 VVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
V D+ + + R + L + Y ++ YG+PQFR R
Sbjct: 175 VPDMALDREMFIFRSIVEELEQLGYSVEGRVLDCRAYGIPQFRQR 219
>gi|22538008|ref|NP_688859.1| prophage LambdaSa2, type II DNA modification methyltransferase
[Streptococcus agalactiae 2603V/R]
gi|22534910|gb|AAN00732.1|AE014276_13 prophage LambdaSa2, type II DNA modification methyltransferase,
putative [Streptococcus agalactiae 2603V/R]
Length = 437
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEF---LKPKYVLMENVV 478
G VDVICGG PCQ S R +D R +F +I F L+PKY+ +ENV
Sbjct: 65 GSVDVICGGFPCQAFSIAGNRRG----FEDTRG---TLFFEIARFASILRPKYLFLENVK 117
Query: 479 DILKFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+L + + + L + Y + I + +G+PQ R R
Sbjct: 118 GLLNHEGGATFETIIRTLDELGYNVEWQIFNSKNFGVPQNRER 160
>gi|417818949|ref|ZP_12465569.1| DNA-cytosine methyltransferase family protein [Vibrio cholerae
HE39]
gi|423939008|ref|ZP_17732491.1| DNA (cytosine-5-)-methyltransferase family protein [Vibrio cholerae
HE-40]
gi|423969482|ref|ZP_17736040.1| DNA (cytosine-5-)-methyltransferase family protein [Vibrio cholerae
HE-46]
gi|340043663|gb|EGR04621.1| DNA-cytosine methyltransferase family protein [Vibrio cholerae
HE39]
gi|408664504|gb|EKL35339.1| DNA (cytosine-5-)-methyltransferase family protein [Vibrio cholerae
HE-40]
gi|408667202|gb|EKL37954.1| DNA (cytosine-5-)-methyltransferase family protein [Vibrio cholerae
HE-46]
Length = 393
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G++D+I GGPPCQG S + R +N + ++D RN ++ + + V PK L+ENV +L
Sbjct: 80 GELDLILGGPPCQGFSTH-RIKN--AGVNDPRNALLLRYFEFVSEFNPKAFLVENVAGLL 136
Query: 482 KFDKASLGRYALSRLVHMKYQARF-GIIAAGCYGLPQFRLR 521
+S + Y +F + A YG+PQ R R
Sbjct: 137 WDRHKDFLEQFISLAENAGYAIKFCDTVNAKDYGVPQNRKR 177
>gi|373947858|ref|ZP_09607819.1| DNA-cytosine methyltransferase [Shewanella baltica OS183]
gi|386326294|ref|YP_006022411.1| DNA-cytosine methyltransferase [Shewanella baltica BA175]
gi|333820439|gb|AEG13105.1| DNA-cytosine methyltransferase [Shewanella baltica BA175]
gi|373884458|gb|EHQ13350.1| DNA-cytosine methyltransferase [Shewanella baltica OS183]
Length = 371
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
++DV+ GPPCQG S N P RN+ + + VE +PK V++ENV++I
Sbjct: 109 NNIDVLLAGPPCQGHSRLNNHTRSKDP----RNKLYLKVIRFVELCRPKLVIIENVLNI- 163
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
K D ++ + L + Y +I YG+ Q R+R
Sbjct: 164 KNDSENILVKSADFLTGLGYSVENLVIKTAEYGIAQNRVR 203
>gi|421355241|ref|ZP_15805572.1| DNA-cytosine methyltransferase family protein [Vibrio cholerae
HE-45]
gi|395949911|gb|EJH60530.1| DNA-cytosine methyltransferase family protein [Vibrio cholerae
HE-45]
Length = 351
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 422 GDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
G++D+I GGPPCQG S + R +N + ++D RN ++ + + V PK L+ENV +L
Sbjct: 80 GELDLILGGPPCQGFSTH-RIKN--AGVNDPRNALLLRYFEFVSEFNPKAFLVENVAGLL 136
Query: 482 KFDKASLGRYALSRLVHMKYQARF-GIIAAGCYGLPQFRLR 521
+S + Y +F + A YG+PQ R R
Sbjct: 137 WDRHKDFLEQFISLAENAGYAIKFCDTVNAKDYGVPQNRKR 177
>gi|434399073|ref|YP_007133077.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
gi|428270170|gb|AFZ36111.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
Length = 417
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
++D+I GGPPCQG S + + LDD RN+ + ++ IV +KPKY + ENV +
Sbjct: 76 NIDLIAGGPPCQGFSQIGKRQ-----LDDPRNQLVFEYLRIVSEVKPKYFIFENVPGMAT 130
Query: 483 FDKASLGRYALSRLVHMKYQA--RFGIIAAGCYGLPQFRLR 521
++ Y ++ A YG PQ R R
Sbjct: 131 GKHQHFLNELITEFAKSDYSVVQPIKVLDASLYGAPQKRKR 171
>gi|440680621|ref|YP_007155416.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
gi|428677740|gb|AFZ56506.1| DNA-cytosine methyltransferase [Anabaena cylindrica PCC 7122]
Length = 391
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 27/123 (21%)
Query: 421 PGDVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI 480
PG++D+I GGPPCQ S + +V P R + F+ IV+ ++P++ LMENV +
Sbjct: 83 PGEIDLITGGPPCQPFSTAGKRGSVMDP----RGSLFMDFIRIVKEVQPRFFLMENVKGL 138
Query: 481 L----------------------KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQF 518
L + A+L + LS + + Y + ++ A YG+PQ
Sbjct: 139 LSAPLCHRPINQRGKDYPPLEADEVGGAAL-KVVLSEMKQIGYNVVYNLLEAADYGVPQN 197
Query: 519 RLR 521
R R
Sbjct: 198 RER 200
>gi|6273357|gb|AAF06333.1| DNA methyltransferase 1 [Xenopus laevis]
Length = 373
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%)
Query: 453 RNRQIVIFMDIVEFLKPKYVLMENVVDILKFDKASLGRYALSRLVHMKYQARFGIIAAGC 512
+N +V ++ ++ +PK+ L+ENV + + F + + + L LV M YQ FG++ AG
Sbjct: 2 KNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQAGQ 61
Query: 513 YGLPQFRLR 521
YG+ Q R R
Sbjct: 62 YGVAQTRRR 70
>gi|54020626|ref|YP_116141.1| cytosine specific DNA methyltransferase [Mycoplasma hyopneumoniae
232]
gi|53987799|gb|AAV28000.1| conserved hypothetical protein [Mycoplasma hyopneumoniae 232]
Length = 416
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 423 DVDVICGGPPCQGIS-GYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDIL 481
++D+I GG PCQG S NR DD RN + +DIV LKPK+VLMENV +
Sbjct: 165 ELDLIAGGFPCQGFSMAGNRV------FDDPRNNLYLEMLDIVANLKPKFVLMENVQGLR 218
Query: 482 KFDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
+ + + Y+ + + +G+ Q R R
Sbjct: 219 TMLSGQIEAKIIKDFEKIGYKINVATLNSADFGVAQIRKR 258
>gi|373117713|ref|ZP_09531857.1| DNA (cytosine-5-)-methyltransferase [Lachnospiraceae bacterium
7_1_58FAA]
gi|371668110|gb|EHO33221.1| DNA (cytosine-5-)-methyltransferase [Lachnospiraceae bacterium
7_1_58FAA]
Length = 379
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
D D++CGG PCQ S R + DD R + E +P Y+L+ENV +L
Sbjct: 60 DFDLLCGGFPCQAFSLAGRRKG----FDDARGTLFFEIARLAETRRPSYLLLENVPGLLN 115
Query: 483 FDKASLGRYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
D LS L + Y + ++ + +G+PQ R R
Sbjct: 116 HDGGRTFAAILSALSDLGYHVEWAVLNSKHFGVPQSRRR 154
>gi|283456339|ref|YP_003360903.1| cytosine methyl transferase [Bifidobacterium dentium Bd1]
gi|283102973|gb|ADB10079.1| dcm Cytosine methyl transferase [Bifidobacterium dentium Bd1]
Length = 509
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 14/109 (12%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDI-- 480
++DV+ GGPPCQ S R D P R + ++D+ L+P+Y+++ENV +
Sbjct: 202 EIDVMFGGPPCQAFSTAGARRAFDDP----RGNCFLAYLDLASQLRPRYLIIENVRGLLS 257
Query: 481 ----LKFDKASLG----RYALSRLVHMKYQARFGIIAAGCYGLPQFRLR 521
LK D A + R L +L M Y F + A YG Q R R
Sbjct: 258 TAYPLKPDGAPVHGGAMRIILDKLEAMGYGVSFQLYDAANYGAFQHRER 306
>gi|428773784|ref|YP_007165572.1| DNA-cytosine methyltransferase [Cyanobacterium stanieri PCC 7202]
gi|428688063|gb|AFZ47923.1| DNA-cytosine methyltransferase [Cyanobacterium stanieri PCC 7202]
Length = 422
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 423 DVDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILK 482
++D++ GGPPCQG S + + LDD RN + ++ +++ L+PKY + ENV +L
Sbjct: 85 ELDLVAGGPPCQGFSLMGKRQ-----LDDPRNALVFEYLRVIKDLQPKYFIFENVPGMLT 139
Query: 483 FDKASLGRYALSRLVHMKYQ-ARFGIIAAGCYGLPQFRLR 521
+ + + Y+ A+ ++ A +G PQ R R
Sbjct: 140 GKHQQFLQELMEEFNSIGYRVAKPRVMNASLFGAPQKRKR 179
>gi|423349093|ref|ZP_17326749.1| DNA (cytosine-5-)-methyltransferase [Scardovia wiggsiae F0424]
gi|393703322|gb|EJD65523.1| DNA (cytosine-5-)-methyltransferase [Scardovia wiggsiae F0424]
Length = 417
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 424 VDVICGGPPCQGISGYNRFRNVDSPLDDERNRQIVIFMDIVEFLKPKYVLMENVVDILKF 483
+D+I GGPPCQ S R R+ +S D+RN V++ + ++ +PKY + ENV+ +L
Sbjct: 108 LDLIIGGPPCQAYSLVGRARDENSMTGDKRNYLYVLYAEFLKRYRPKYFVFENVIGLLS- 166
Query: 484 DKASLGRYALSRLVHM----KYQARFGIIAAGCYGLPQFRLR 521
K G+ ++ + Y + ++ A YG+ Q R R
Sbjct: 167 AKDIDGKLHFIKMQDLFSSIGYSIEYDVLNAKDYGVLQNRKR 208
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,563,295,748
Number of Sequences: 23463169
Number of extensions: 372915056
Number of successful extensions: 854034
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 3159
Number of HSP's that attempted gapping in prelim test: 846056
Number of HSP's gapped (non-prelim): 7755
length of query: 521
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 374
effective length of database: 8,910,109,524
effective search space: 3332380961976
effective search space used: 3332380961976
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)