BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046473
(120 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|343887316|dbj|BAK61862.1| 40S ribosomal protein S3 [Citrus unshiu]
Length = 184
Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/118 (88%), Positives = 108/118 (91%), Gaps = 1/118 (0%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFI-MES 59
SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR + L + + AC GVLRFI +ES
Sbjct: 14 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACCGVLRFIILES 73
Query: 60 GAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQASSIFCGY 117
GAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVL RQASSIFCGY
Sbjct: 74 GAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLLRQASSIFCGY 131
>gi|225444782|ref|XP_002279950.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
gi|297738588|emb|CBI27833.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/110 (85%), Positives = 98/110 (89%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPENSVELYAEKVNNRGLCA+AQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAVAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVKEYIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
>gi|449447888|ref|XP_004141698.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
gi|449521735|ref|XP_004167885.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
Length = 236
Score = 192 bits (489), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/110 (85%), Positives = 98/110 (89%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVKEYIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
>gi|359476269|ref|XP_002281141.2| PREDICTED: 40S ribosomal protein S3-3-like [Vitis vinifera]
gi|296081703|emb|CBI20708.3| unnamed protein product [Vitis vinifera]
Length = 235
Score = 191 bits (486), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/110 (84%), Positives = 98/110 (89%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVK+YIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
>gi|225442156|ref|XP_002275541.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
gi|297743020|emb|CBI35887.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 191 bits (486), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/110 (84%), Positives = 98/110 (89%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPEN+VELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFKFPENTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVKEYIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
>gi|388494596|gb|AFK35364.1| unknown [Lotus japonicus]
gi|388504726|gb|AFK40429.1| unknown [Lotus japonicus]
Length = 237
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/109 (85%), Positives = 98/109 (89%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVK+YIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQ 179
>gi|357438107|ref|XP_003589329.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355478377|gb|AES59580.1| 40S ribosomal protein S3 [Medicago truncatula]
Length = 239
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/110 (84%), Positives = 98/110 (89%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKVLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVK+YIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
>gi|356559951|ref|XP_003548259.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 236
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/109 (85%), Positives = 98/109 (89%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVK+YIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQ 179
>gi|356534900|ref|XP_003535989.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 239
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/110 (84%), Positives = 98/110 (89%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVK+YIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
>gi|358348478|ref|XP_003638273.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355504208|gb|AES85411.1| 40S ribosomal protein S3 [Medicago truncatula]
Length = 239
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/110 (84%), Positives = 98/110 (89%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVK+YIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
>gi|356559953|ref|XP_003548260.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 235
Score = 191 bits (485), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/109 (85%), Positives = 98/109 (89%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVK+YIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQ 179
>gi|358248410|ref|NP_001239621.1| uncharacterized protein LOC100808705 [Glycine max]
gi|255641130|gb|ACU20843.1| unknown [Glycine max]
Length = 236
Score = 191 bits (485), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/110 (84%), Positives = 98/110 (89%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVK+YIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
>gi|356534894|ref|XP_003535986.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 236
Score = 191 bits (485), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/110 (84%), Positives = 98/110 (89%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVK+YIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
>gi|357439691|ref|XP_003590123.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|217071466|gb|ACJ84093.1| unknown [Medicago truncatula]
gi|355479171|gb|AES60374.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|388518095|gb|AFK47109.1| unknown [Medicago truncatula]
Length = 239
Score = 191 bits (485), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/110 (84%), Positives = 98/110 (89%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVK+YIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
>gi|118488288|gb|ABK95963.1| unknown [Populus trichocarpa]
Length = 232
Score = 191 bits (484), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 93/110 (84%), Positives = 97/110 (88%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPEN VELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVKEYIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
>gi|224135747|ref|XP_002322150.1| predicted protein [Populus trichocarpa]
gi|222869146|gb|EEF06277.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 190 bits (483), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 93/110 (84%), Positives = 97/110 (88%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPEN VELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVKEYIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
>gi|224141685|ref|XP_002324195.1| predicted protein [Populus trichocarpa]
gi|118483222|gb|ABK93514.1| unknown [Populus trichocarpa]
gi|118487214|gb|ABK95435.1| unknown [Populus trichocarpa]
gi|222865629|gb|EEF02760.1| predicted protein [Populus trichocarpa]
Length = 234
Score = 190 bits (483), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 93/110 (84%), Positives = 97/110 (88%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPEN VELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVKEYIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
>gi|449446618|ref|XP_004141068.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
gi|449488075|ref|XP_004157933.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
Length = 243
Score = 190 bits (483), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 92/110 (83%), Positives = 98/110 (89%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PV++YIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
>gi|255550145|ref|XP_002516123.1| 40S ribosomal protein S3, putative [Ricinus communis]
gi|223544609|gb|EEF46125.1| 40S ribosomal protein S3, putative [Ricinus communis]
Length = 234
Score = 190 bits (483), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 93/110 (84%), Positives = 97/110 (88%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FP+NSVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 SVVQKRFNFPDNSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVKEYIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
>gi|255546003|ref|XP_002514061.1| 40S ribosomal protein S3, putative [Ricinus communis]
gi|223546517|gb|EEF48015.1| 40S ribosomal protein S3, putative [Ricinus communis]
Length = 233
Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/110 (84%), Positives = 98/110 (89%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPENSVELYAEKVN+RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 72 SVVQKRFKFPENSVELYAEKVNSRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVK+YIDSAVRHVL RQ
Sbjct: 132 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 181
>gi|217071088|gb|ACJ83904.1| unknown [Medicago truncatula]
gi|388507820|gb|AFK41976.1| unknown [Medicago truncatula]
Length = 239
Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/110 (83%), Positives = 97/110 (88%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR + L + + CYGVLRF+MESG
Sbjct: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRVCYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVK+YIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
>gi|351726176|ref|NP_001235326.1| uncharacterized protein LOC100499737 [Glycine max]
gi|255626187|gb|ACU13438.1| unknown [Glycine max]
Length = 236
Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/110 (83%), Positives = 98/110 (89%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR + L + + AC+GVLRF+MESG
Sbjct: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACHGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVK+YIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
>gi|255638159|gb|ACU19393.1| unknown [Glycine max]
Length = 236
Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/110 (83%), Positives = 97/110 (88%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR + L + + CYGVLRF+MESG
Sbjct: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRVCYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVK+YIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
>gi|224088766|ref|XP_002308530.1| predicted protein [Populus trichocarpa]
gi|118483836|gb|ABK93809.1| unknown [Populus trichocarpa]
gi|118485378|gb|ABK94546.1| unknown [Populus trichocarpa]
gi|222854506|gb|EEE92053.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/110 (83%), Positives = 97/110 (88%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPEN VELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVKEYID+AVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDAAVRHVLLRQG 180
>gi|388495648|gb|AFK35890.1| unknown [Lotus japonicus]
Length = 235
Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/109 (84%), Positives = 97/109 (88%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S V KRFKFPENSVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVSKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVK+YIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQ 179
>gi|192910782|gb|ACF06499.1| ribosomal protein [Elaeis guineensis]
Length = 235
Score = 187 bits (476), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 92/110 (83%), Positives = 96/110 (87%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPENSVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFSFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMIS G PVKEYIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISCGQPVKEYIDSAVRHVLLRQG 180
>gi|115473289|ref|NP_001060243.1| Os07g0608500 [Oryza sativa Japonica Group]
gi|14192875|gb|AAK55780.1|AC079038_14 Putative 40S ribosomal protein; contains C-terminal domain [Oryza
sativa]
gi|34394183|dbj|BAC84635.1| putative 40S ribosomal protein [Oryza sativa Japonica Group]
gi|50509862|dbj|BAD32034.1| putative 40S ribosomal protein [Oryza sativa Japonica Group]
gi|113611779|dbj|BAF22157.1| Os07g0608500 [Oryza sativa Japonica Group]
gi|125559132|gb|EAZ04668.1| hypothetical protein OsI_26820 [Oryza sativa Indica Group]
gi|125601033|gb|EAZ40609.1| hypothetical protein OsJ_25071 [Oryza sativa Japonica Group]
gi|215694983|dbj|BAG90174.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 233
Score = 187 bits (475), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 91/110 (82%), Positives = 95/110 (86%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPEN VELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 73 SVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSGYPV YIDSAVRHVL RQ
Sbjct: 133 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQG 182
>gi|241865275|gb|ACS68715.1| 40S RPS3B [Sonneratia alba]
gi|241865508|gb|ACS68786.1| RPS3B [Sonneratia alba]
Length = 156
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/110 (82%), Positives = 96/110 (87%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPEN VELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+M+SG
Sbjct: 28 SVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMDSG 87
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PV EYIDSAVRHVL RQ
Sbjct: 88 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 137
>gi|255637340|gb|ACU19000.1| unknown [Glycine max]
Length = 236
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/109 (83%), Positives = 96/109 (88%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEVIVSGKLRAQRA SMKFKDGYMI SG PVK+YID AVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMIFSGQPVKDYIDFAVRHVLLRQ 179
>gi|357498229|ref|XP_003619403.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|357498233|ref|XP_003619405.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355494418|gb|AES75621.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355494420|gb|AES75623.1| 40S ribosomal protein S3 [Medicago truncatula]
Length = 235
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/109 (82%), Positives = 96/109 (88%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEVIVSGKLRAQRA SMKFK YMISSG PVK+Y+DSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKQNYMISSGQPVKDYVDSAVRHVLLRQ 179
>gi|82623397|gb|ABB87113.1| unknown [Solanum tuberosum]
Length = 238
Score = 185 bits (469), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/110 (82%), Positives = 96/110 (87%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F ENSVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 72 SVVQKRFNFKENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVKEYID+AVRHVL RQ
Sbjct: 132 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDAAVRHVLLRQG 181
>gi|116786147|gb|ABK23996.1| unknown [Picea sitchensis]
gi|116793880|gb|ABK26916.1| unknown [Picea sitchensis]
Length = 233
Score = 184 bits (468), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 90/110 (81%), Positives = 94/110 (85%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPE +VELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 SVVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PV EYID AVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDKAVRHVLLRQG 180
>gi|116783944|gb|ABK23152.1| unknown [Picea sitchensis]
gi|116792247|gb|ABK26290.1| unknown [Picea sitchensis]
Length = 233
Score = 184 bits (466), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 90/110 (81%), Positives = 94/110 (85%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPE +VELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 SVVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PV EYID AVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDRAVRHVLLRQG 180
>gi|242080689|ref|XP_002445113.1| hypothetical protein SORBIDRAFT_07g004290 [Sorghum bicolor]
gi|241941463|gb|EES14608.1| hypothetical protein SORBIDRAFT_07g004290 [Sorghum bicolor]
Length = 228
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/110 (81%), Positives = 94/110 (85%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPEN VELYAEKV NRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PV EYIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
>gi|413921201|gb|AFW61133.1| 40S ribosomal protein S3 [Zea mays]
Length = 228
Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/110 (81%), Positives = 94/110 (85%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPEN VELYAEKV NRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PV EYIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
>gi|115453877|ref|NP_001050539.1| Os03g0577000 [Oryza sativa Japonica Group]
gi|38093738|gb|AAR10854.1| putative ribosomal protein [Oryza sativa Japonica Group]
gi|108709465|gb|ABF97260.1| 40S ribosomal protein S3, putative, expressed [Oryza sativa
Japonica Group]
gi|113549010|dbj|BAF12453.1| Os03g0577000 [Oryza sativa Japonica Group]
gi|125544608|gb|EAY90747.1| hypothetical protein OsI_12347 [Oryza sativa Indica Group]
gi|125586911|gb|EAZ27575.1| hypothetical protein OsJ_11524 [Oryza sativa Japonica Group]
gi|215686413|dbj|BAG87698.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708682|dbj|BAG93951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 228
Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/110 (81%), Positives = 94/110 (85%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPEN VELYAEKV NRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PV EYIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
>gi|108709466|gb|ABF97261.1| 40S ribosomal protein S3, putative, expressed [Oryza sativa
Japonica Group]
Length = 205
Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/110 (81%), Positives = 94/110 (85%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPEN VELYAEKV NRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 48 SVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 107
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PV EYIDSAVRHVL RQ
Sbjct: 108 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 157
>gi|384247377|gb|EIE20864.1| putative 40S ribosomal protein S3, partial [Coccomyxa
subellipsoidea C-169]
Length = 217
Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/110 (80%), Positives = 96/110 (87%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRFKFPENSVELYAEKV NRGLCAIAQAESLR + L + + ACYGVLRFIME+G
Sbjct: 71 AVVQKRFKFPENSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMENG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA +MKFKDGYMISSG PV +YIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKAMKFKDGYMISSGQPVNDYIDSAVRHVLLRQG 180
>gi|297816692|ref|XP_002876229.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
gi|297322067|gb|EFH52488.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
Length = 249
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/110 (80%), Positives = 95/110 (86%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRA RA SMKFKDGYM+SSG P KEYIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180
>gi|212723988|ref|NP_001132637.1| hypothetical protein [Zea mays]
gi|194694962|gb|ACF81565.1| unknown [Zea mays]
gi|414887551|tpg|DAA63565.1| TPA: hypothetical protein ZEAMMB73_179327 [Zea mays]
gi|414887552|tpg|DAA63566.1| TPA: hypothetical protein ZEAMMB73_179327 [Zea mays]
Length = 232
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/110 (80%), Positives = 94/110 (85%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPE VELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 73 SVVQKRFNFPEGGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG+PV YIDSAVRHVL RQ
Sbjct: 133 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQG 182
>gi|15232352|ref|NP_190955.1| 40S ribosomal protein S3-2 [Arabidopsis thaliana]
gi|75183568|sp|Q9M339.1|RS32_ARATH RecName: Full=40S ribosomal protein S3-2
gi|16226458|gb|AAL16173.1|AF428405_1 AT3g53870/F5K20_170 [Arabidopsis thaliana]
gi|7630007|emb|CAB88349.1| ribosomal protein S3a homolog [Arabidopsis thaliana]
gi|14334698|gb|AAK59527.1| putative ribosomal protein S3a homolog [Arabidopsis thaliana]
gi|16323404|gb|AAL15196.1| putative ribosomal protein S3a homolog [Arabidopsis thaliana]
gi|21618068|gb|AAM67118.1| ribosomal protein S3a-like protein [Arabidopsis thaliana]
gi|332645631|gb|AEE79152.1| 40S ribosomal protein S3-2 [Arabidopsis thaliana]
Length = 249
Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/110 (80%), Positives = 95/110 (86%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRA RA SMKFKDGYM+SSG P KEYIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180
>gi|242050848|ref|XP_002463168.1| hypothetical protein SORBIDRAFT_02g038990 [Sorghum bicolor]
gi|241926545|gb|EER99689.1| hypothetical protein SORBIDRAFT_02g038990 [Sorghum bicolor]
Length = 232
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/110 (80%), Positives = 94/110 (85%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPE VELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 73 SVVQKRFNFPEGGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG+PV YIDSAVRHVL RQ
Sbjct: 133 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQG 182
>gi|302761098|ref|XP_002963971.1| hypothetical protein SELMODRAFT_270414 [Selaginella moellendorffii]
gi|302768543|ref|XP_002967691.1| hypothetical protein SELMODRAFT_270666 [Selaginella moellendorffii]
gi|302769059|ref|XP_002967949.1| hypothetical protein SELMODRAFT_270664 [Selaginella moellendorffii]
gi|300164429|gb|EFJ31038.1| hypothetical protein SELMODRAFT_270666 [Selaginella moellendorffii]
gi|300164687|gb|EFJ31296.1| hypothetical protein SELMODRAFT_270664 [Selaginella moellendorffii]
gi|300167700|gb|EFJ34304.1| hypothetical protein SELMODRAFT_270414 [Selaginella moellendorffii]
Length = 230
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/110 (80%), Positives = 95/110 (86%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPE++VELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 SVVQKRFSFPESTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PV E+ID AVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGSPVNEFIDRAVRHVLLRQG 180
>gi|357144865|ref|XP_003573440.1| PREDICTED: 40S ribosomal protein S3-3-like [Brachypodium
distachyon]
Length = 227
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/110 (80%), Positives = 94/110 (85%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPEN VELYAEKV NRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PV EYID+AVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQG 180
>gi|413921202|gb|AFW61134.1| hypothetical protein ZEAMMB73_998294 [Zea mays]
Length = 265
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/109 (82%), Positives = 94/109 (86%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPEN VELYAEKV NRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PV EYIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQ 179
>gi|15225107|ref|NP_180719.1| 40S ribosomal protein S3-1 [Arabidopsis thaliana]
gi|75206146|sp|Q9SIP7.1|RS31_ARATH RecName: Full=40S ribosomal protein S3-1
gi|14190419|gb|AAK55690.1|AF378887_1 At2g31610/T9H9.13 [Arabidopsis thaliana]
gi|4582468|gb|AAD24852.1| 40S ribosomal protein; contains C-terminal domain [Arabidopsis
thaliana]
gi|15028253|gb|AAK76715.1| putative 40S ribosomal protein; contains C-terminal domain
[Arabidopsis thaliana]
gi|15450571|gb|AAK96463.1| At2g31610/T9H9.13 [Arabidopsis thaliana]
gi|15451084|gb|AAK96813.1| 40S ribosomal protein [Arabidopsis thaliana]
gi|20148377|gb|AAM10079.1| 40S ribosomal protein; contains C-terminal domain [Arabidopsis
thaliana]
gi|20258907|gb|AAM14147.1| putative 40S ribosomal protein [Arabidopsis thaliana]
gi|330253473|gb|AEC08567.1| 40S ribosomal protein S3-1 [Arabidopsis thaliana]
Length = 250
Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 88/109 (80%), Positives = 95/109 (87%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEVIVSGKLRA RA SMKFKDGYM+SSG P KEYID+AVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQ 179
>gi|326493582|dbj|BAJ85252.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510059|dbj|BAJ87246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 227
Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/110 (80%), Positives = 94/110 (85%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPEN VELYAEKV NRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PV EYID+AVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQG 180
>gi|414887550|tpg|DAA63564.1| TPA: hypothetical protein ZEAMMB73_179327 [Zea mays]
Length = 198
Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/115 (78%), Positives = 97/115 (84%), Gaps = 3/115 (2%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPE VELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 73 SVVQKRFNFPEGGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQASSIFC 115
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG+PV YIDSAVRHVL RQ ++C
Sbjct: 133 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQ---VWC 184
>gi|226495937|ref|NP_001149150.1| LOC100282772 [Zea mays]
gi|195625100|gb|ACG34380.1| 40S ribosomal protein S3 [Zea mays]
gi|223947389|gb|ACN27778.1| unknown [Zea mays]
gi|223972753|gb|ACN30564.1| unknown [Zea mays]
gi|413917290|gb|AFW57222.1| 40S ribosomal protein S3 [Zea mays]
Length = 229
Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/110 (80%), Positives = 94/110 (85%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPEN VELYAEKV NRGLCAIAQAESLR + L + + ACYGVLR++MESG
Sbjct: 71 SVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRYVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PV EYIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
>gi|195637410|gb|ACG38173.1| 40S ribosomal protein S3 [Zea mays]
Length = 228
Score = 182 bits (461), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/110 (80%), Positives = 94/110 (85%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPEN VELYAEKV NRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+GCEVIVSGKLRAQRA SMKFKDGYMISSG PV EYIDSAVRHVL RQ
Sbjct: 131 AEGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
>gi|168010087|ref|XP_001757736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168036169|ref|XP_001770580.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168066635|ref|XP_001785240.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663171|gb|EDQ49951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678101|gb|EDQ64563.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691012|gb|EDQ77376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 181 bits (459), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/110 (80%), Positives = 95/110 (86%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF+FPE +VELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 SVVQKRFQFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRA RA SMKFKDGYMISSG PV +YIDSAVRHV+ RQ
Sbjct: 131 AKGCEVIVSGKLRAARAKSMKFKDGYMISSGSPVNDYIDSAVRHVMLRQG 180
>gi|168010855|ref|XP_001758119.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168015431|ref|XP_001760254.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168037634|ref|XP_001771308.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677397|gb|EDQ63868.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688634|gb|EDQ75010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690575|gb|EDQ76941.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 230
Score = 181 bits (459), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 88/110 (80%), Positives = 95/110 (86%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF+FPE +VELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 SVVQKRFQFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRA RA SMKFKDGYMISSG PV +YIDSAVRHV+ RQ
Sbjct: 131 AKGCEVIVSGKLRAARAKSMKFKDGYMISSGSPVNDYIDSAVRHVMLRQG 180
>gi|297822907|ref|XP_002879336.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
gi|297325175|gb|EFH55595.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
Length = 250
Score = 181 bits (458), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 88/109 (80%), Positives = 94/109 (86%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEVIVSGKLRA RA SMKF DGYM+SSG P KEYIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAARAKSMKFMDGYMVSSGQPTKEYIDSAVRHVLLRQ 179
>gi|255637525|gb|ACU19089.1| unknown [Glycine max]
Length = 239
Score = 181 bits (458), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 93/120 (77%), Positives = 99/120 (82%), Gaps = 2/120 (1%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQASSIFCGYVKI 120
AKGCEVIVSGKLRAQRA MKFKDGYMI G PVK+YID AVRHVL RQ +F VKI
Sbjct: 131 AKGCEVIVSGKLRAQRAKFMKFKDGYMIFFGQPVKDYIDFAVRHVLLRQG--VFGIKVKI 188
>gi|307103536|gb|EFN51795.1| hypothetical protein CHLNCDRAFT_59796 [Chlorella variabilis]
Length = 230
Score = 181 bits (458), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 87/110 (79%), Positives = 94/110 (85%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPE SVELYAEKV NRGLCA+AQAES+R + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFKFPEGSVELYAEKVANRGLCAVAQAESMRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYM+SSG PV EYIDSA RHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGNPVHEYIDSATRHVLLRQG 180
>gi|15238533|ref|NP_198403.1| 40S ribosomal protein S3-3 [Arabidopsis thaliana]
gi|75170994|sp|Q9FJA6.1|RS33_ARATH RecName: Full=40S ribosomal protein S3-3
gi|9758155|dbj|BAB08712.1| 40S ribosomal protein S3 [Arabidopsis thaliana]
gi|16604318|gb|AAL24165.1| AT5g35530/MOK9_14 [Arabidopsis thaliana]
gi|20466075|gb|AAM19959.1| AT5g35530/MOK9_14 [Arabidopsis thaliana]
gi|332006595|gb|AED93978.1| 40S ribosomal protein S3-3 [Arabidopsis thaliana]
Length = 248
Score = 180 bits (457), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 87/109 (79%), Positives = 95/109 (87%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFP++SVELYAEKV NRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEVIVSGKLRA RA SMKFKDGYM+SSG P KEYID+AVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQ 179
>gi|222424342|dbj|BAH20127.1| AT5G35530 [Arabidopsis thaliana]
Length = 248
Score = 180 bits (457), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 87/109 (79%), Positives = 95/109 (87%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFP++SVELYAEKV NRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEVIVSGKLRA RA SMKFKDGYM+SSG P KEYID+AVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQ 179
>gi|297805098|ref|XP_002870433.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
gi|297316269|gb|EFH46692.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
Length = 248
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/109 (78%), Positives = 95/109 (87%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF+FP++SVELYAEKV NRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SLVQKRFRFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEVIVSGKLRA RA SMKFKDGYM+SSG P KEYID+AVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQ 179
>gi|313103630|pdb|3IZ6|B Chain B, Localization Of The Small Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
gi|22204124|gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum]
Length = 227
Score = 177 bits (449), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 88/110 (80%), Positives = 93/110 (84%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F EN VELYAEKV NRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFNFLENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG PV EYID+AVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQG 180
>gi|302761842|ref|XP_002964343.1| hypothetical protein SELMODRAFT_438700 [Selaginella moellendorffii]
gi|300168072|gb|EFJ34676.1| hypothetical protein SELMODRAFT_438700 [Selaginella moellendorffii]
Length = 236
Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/116 (79%), Positives = 97/116 (83%), Gaps = 6/116 (5%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKE---GLAV---IVCKMACYGVLR 54
S VQKRF FPE++VELYAEKVNNRGLCAIAQAESLR + GLAV + ACYGVLR
Sbjct: 71 SVVQKRFSFPESTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRVLYFVRACYGVLR 130
Query: 55 FIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
FIMESGAKGCEVIVSGKLRAQRA SMKFKDGYMISSG PV E+ID AVRHVL RQ
Sbjct: 131 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGSPVNEFIDRAVRHVLLRQG 186
>gi|326531446|dbj|BAJ97727.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 230
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/110 (76%), Positives = 92/110 (83%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FP+ VELYAEKV NRGLCA+AQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFNFPDGGVELYAEKVLNRGLCAVAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA MKFKDGYMISSG+PV +YID AVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKPMKFKDGYMISSGHPVNQYIDGAVRHVLLRQG 180
>gi|357116410|ref|XP_003559974.1| PREDICTED: 40S ribosomal protein S3-3-like [Brachypodium
distachyon]
Length = 276
Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/110 (77%), Positives = 92/110 (83%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FP+ VELYAEKV NRGLCA+AQAESLR + L + + ACYGVLRF+MESG
Sbjct: 117 SVVQKRFNFPDGGVELYAEKVLNRGLCAVAQAESLRYKLLGGLAVRRACYGVLRFVMESG 176
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGYMISSG+PV YID AVRHVL RQ
Sbjct: 177 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDGAVRHVLLRQG 226
>gi|358346770|ref|XP_003637438.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355503373|gb|AES84576.1| 40S ribosomal protein S3 [Medicago truncatula]
Length = 237
Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/110 (75%), Positives = 93/110 (84%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ + KRF FPENSV+LYAEKV+NRGLCA AQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 TLIHKRFNFPENSVQLYAEKVSNRGLCAAAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFK G M+SSG PVK+YIDSAVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKHGDMLSSGQPVKDYIDSAVRHVLLRQG 180
>gi|74272607|gb|ABA01099.1| 40S ribosomal protein S3 [Chlamydomonas incerta]
Length = 230
Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/110 (75%), Positives = 93/110 (84%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FP +SVELYAEKV++RGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFNFPPDSVELYAEKVSDRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRA RA SMKFKDGYM+SSG+P + YID AVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAARAKSMKFKDGYMVSSGHPARVYIDGAVRHVLLRQG 180
>gi|302829332|ref|XP_002946233.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f.
nagariensis]
gi|300269048|gb|EFJ53228.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f.
nagariensis]
Length = 1596
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 83/110 (75%), Positives = 92/110 (83%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FP +SVELYAEKV +RGLCA+AQAESLR + L + + ACYGVLRF+MESG
Sbjct: 1437 SVVQKRFNFPADSVELYAEKVLDRGLCAVAQAESLRYKLLGGLAVRRACYGVLRFVMESG 1496
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRA RA SMKFKDGYM+SSG P K YID+AVRHVL RQ
Sbjct: 1497 AKGCEVIVSGKLRAARAKSMKFKDGYMVSSGNPAKVYIDAAVRHVLLRQG 1546
>gi|159483497|ref|XP_001699797.1| ribosomal protein S3, component of cytosolic 80S ribosome and 40S
small subunit [Chlamydomonas reinhardtii]
gi|158281739|gb|EDP07493.1| ribosomal protein S3 [Chlamydomonas reinhardtii]
Length = 230
Score = 172 bits (435), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/110 (76%), Positives = 92/110 (83%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FP +SVELYAEKV++RGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFNFPPDSVELYAEKVSDRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRA RA SMKFKDGYM+SSG P K YID AVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAARAKSMKFKDGYMVSSGNPAKVYIDGAVRHVLLRQG 180
>gi|37724563|gb|AAO20336.1| ribosomal protein S3 [Hydra vulgaris]
Length = 238
Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/110 (75%), Positives = 90/110 (81%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPE SVELYAEKV RGLCAIAQ ESLR + LA + ACYGV+RFIMESG
Sbjct: 70 SVVQKRFNFPEGSVELYAEKVATRGLCAIAQCESLRYKLLAGAPVRKACYGVVRFIMESG 129
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLR QRA SMKF DG+MI SGYP++EYID+AVRHV RQ
Sbjct: 130 AKGCEVIVSGKLRGQRAKSMKFTDGFMIHSGYPIQEYIDTAVRHVYLRQG 179
>gi|221126927|ref|XP_002162713.1| PREDICTED: 40S ribosomal protein S3-like [Hydra magnipapillata]
Length = 239
Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/110 (75%), Positives = 90/110 (81%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPE SVELYAEKV RGLCAIAQ ESLR + LA + ACYGV+RFIMESG
Sbjct: 71 SVVQKRFNFPEGSVELYAEKVATRGLCAIAQCESLRYKLLAGAPVRKACYGVVRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLR QRA SMKF DG+MI SGYP++EYID+AVRHV RQ
Sbjct: 131 AKGCEVIVSGKLRGQRAKSMKFTDGFMIHSGYPIQEYIDTAVRHVYLRQG 180
>gi|320163406|gb|EFW40305.1| ribosomal protein S3 [Capsaspora owczarzaki ATCC 30864]
Length = 252
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 90/110 (81%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPENSVELYAEKV NRGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 72 SVVQKRFGFPENSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKG EV+VSGKLR QRA +MKF+DG+M+ SG+P YID AVRHVL RQ
Sbjct: 132 AKGVEVVVSGKLRGQRAKAMKFQDGFMVHSGFPTTYYIDRAVRHVLLRQG 181
>gi|303276783|ref|XP_003057685.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460342|gb|EEH57636.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 232
Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/110 (75%), Positives = 92/110 (83%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F E SVELYAEKV NRGLCAIAQAESLR + L + + ACYGVLRFIME+G
Sbjct: 71 SLVQKRFGFAEGSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMENG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QR +MKFKDGYMISSG PV+EYI+S+VRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRGKAMKFKDGYMISSGNPVREYIESSVRHVLLRQG 180
>gi|328767669|gb|EGF77718.1| hypothetical protein BATDEDRAFT_91509 [Batrachochytrium
dendrobatidis JAM81]
Length = 240
Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 91/110 (82%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF +PEN+VELYAEKVNNRGL A+AQAESLR + L + + ACYGV+RF+MESG
Sbjct: 71 SIVQKRFNYPENTVELYAEKVNNRGLSAVAQAESLRYKLLGGLAVRRACYGVVRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV++SGKLRA RA SMKF DG+MI SG P KEYID AVRHVL RQ
Sbjct: 131 AKGCEVVISGKLRAARAKSMKFVDGFMIHSGQPAKEYIDYAVRHVLLRQG 180
>gi|326533734|dbj|BAK05398.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/109 (72%), Positives = 91/109 (83%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPENS+ELYAEKV NRGL A+AQAESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLVQKRFKFPENSLELYAEKVQNRGLSAVAQAESLRYKLLGGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEV+VSGKLRA RA +MKF DG+MI SG P ++++D AVRHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKAMKFTDGFMIHSGQPARDFVDQAVRHVLLRQ 182
>gi|345570572|gb|EGX53393.1| hypothetical protein AOL_s00006g259 [Arthrobotrys oligospora ATCC
24927]
Length = 270
Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/109 (73%), Positives = 90/109 (82%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGLCA+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 73 SLIQKRFKFPENSVSLYAAKVQNRGLCAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEV+VSGKLRA RA SMKF DG+MI SG PV+++IDSA RHVL RQ
Sbjct: 133 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQ 181
>gi|160550139|gb|ABX44774.1| putative 40S ribosomal protein RPS3 [Flustra foliacea]
Length = 234
Score = 168 bits (425), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 90/110 (81%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE +VELYAEKVNNRGLCAIAQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFNFPEGTVELYAEKVNNRGLCAIAQCESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA +MKF DG MI SG P +EY+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKAMKFVDGLMIHSGEPSREYVDTAVRHVLLRQG 180
>gi|430813642|emb|CCJ29017.1| unnamed protein product [Pneumocystis jirovecii]
Length = 412
Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats.
Identities = 79/110 (71%), Positives = 90/110 (81%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPE SVELYAEKV NRGLCA+AQ ESLR + LA + + A YGVLRFIMESG
Sbjct: 235 SLIQKRFKFPEGSVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRRAAYGVLRFIMESG 294
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV++SGKLRA RA SMKF DG+MI SG P +++IDSA RHVL RQ
Sbjct: 295 AKGCEVVISGKLRAARAKSMKFTDGFMIHSGQPSRDFIDSATRHVLLRQG 344
>gi|325087729|gb|EGC41039.1| 40S ribosomal protein S3 [Ajellomyces capsulatus H88]
Length = 1089
Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats.
Identities = 79/110 (71%), Positives = 89/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 892 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 951
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG PV+++IDSA RHVL RQ
Sbjct: 952 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQG 1001
>gi|296423595|ref|XP_002841339.1| 40S ribosomal protein S3 [Tuber melanosporum Mel28]
gi|295637576|emb|CAZ85530.1| unnamed protein product [Tuber melanosporum]
Length = 360
Score = 167 bits (423), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 89/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGLCA+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 154 SLIQKRFKFPENSVSLYAAKVQNRGLCAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 213
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P +++IDSA RHVL RQ
Sbjct: 214 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDSATRHVLLRQG 263
>gi|90991377|dbj|BAE93070.1| ribosomal protein S3 [Lethenteron camtschaticum]
Length = 240
Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF FPE SVELYAEKV NRGLCAIAQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 71 SVIQKRFNFPEGSVELYAEKVANRGLCAIAQCESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+A+RHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNHYVDTAIRHVLLRQG 180
>gi|240281578|gb|EER45081.1| 40S ribosomal protein S3 [Ajellomyces capsulatus H143]
Length = 1054
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 79/110 (71%), Positives = 89/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 857 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 916
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG PV+++IDSA RHVL RQ
Sbjct: 917 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQG 966
>gi|28630346|gb|AAN77894.1| ribosomal protein S3 [Petromyzon marinus]
Length = 206
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF FPE SVELYAEKV NRGLCAIAQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 71 SVIQKRFNFPEGSVELYAEKVANRGLCAIAQCESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+A+RHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNHYVDTAIRHVLLRQG 180
>gi|452821888|gb|EME28913.1| 40S ribosomal protein S3e [Galdieria sulphuraria]
Length = 227
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/108 (72%), Positives = 90/108 (83%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRF+FPE +VELYAEKV +RGLCAIAQAESLR + L + + ACYGVLRF+MESGAK
Sbjct: 73 VQKRFRFPEGTVELYAEKVADRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GC V VSG LRAQRA +MKF DGYM+ SG PVK+Y+D+AVRHVL RQ
Sbjct: 133 GCVVTVSGLLRAQRAKTMKFTDGYMVHSGQPVKDYVDTAVRHVLMRQG 180
>gi|149068849|gb|EDM18401.1| rCG40478, isoform CRA_k [Rattus norvegicus]
Length = 201
Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/115 (73%), Positives = 91/115 (79%), Gaps = 3/115 (2%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQASSIFC 115
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQA FC
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQA---FC 182
>gi|395521196|ref|XP_003764704.1| PREDICTED: 40S ribosomal protein S3 [Sarcophilus harrisii]
Length = 245
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 73 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 133 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 182
>gi|410909578|ref|XP_003968267.1| PREDICTED: 40S ribosomal protein S3-like [Takifugu rubripes]
Length = 245
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|37595356|gb|AAQ94564.1| ribosomal protein S3 [Danio rerio]
Length = 245
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|67527620|ref|XP_661691.1| hypothetical protein AN4087.2 [Aspergillus nidulans FGSC A4]
gi|40739785|gb|EAA58975.1| hypothetical protein AN4087.2 [Aspergillus nidulans FGSC A4]
gi|259481325|tpe|CBF74736.1| TPA: hypothetical protein similar to 40s ribosomal protein s3
(Eurofung) [Aspergillus nidulans FGSC A4]
Length = 264
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 72 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P KE+IDSA RHVL RQ
Sbjct: 132 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQG 181
>gi|426369809|ref|XP_004051876.1| PREDICTED: 40S ribosomal protein S3 isoform 3 [Gorilla gorilla
gorilla]
Length = 206
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 34 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 93
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 94 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 143
>gi|60652571|gb|AAX28980.1| ribosomal protein S3 [synthetic construct]
Length = 244
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|124300789|dbj|BAF45890.1| ribosomal protein S3 [Solea senegalensis]
Length = 245
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|71895095|ref|NP_001026007.1| 40S ribosomal protein S3 [Gallus gallus]
gi|53133686|emb|CAG32172.1| hypothetical protein RCJMB04_19g1 [Gallus gallus]
Length = 244
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|225707598|gb|ACO09645.1| 40S ribosomal protein S3 [Osmerus mordax]
Length = 245
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|70990926|ref|XP_750312.1| 40S ribosomal protein S3 [Aspergillus fumigatus Af293]
gi|119496667|ref|XP_001265107.1| 40S ribosomal protein S3 [Neosartorya fischeri NRRL 181]
gi|66847944|gb|EAL88274.1| 40S ribosomal protein S3, putative [Aspergillus fumigatus Af293]
gi|119413269|gb|EAW23210.1| 40S ribosomal protein S3, putative [Neosartorya fischeri NRRL 181]
gi|159130785|gb|EDP55898.1| 40S ribosomal protein S3, putative [Aspergillus fumigatus A1163]
Length = 266
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/109 (73%), Positives = 88/109 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEV+VSGKLRA RA SMKF DG+MI SG P KE+IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQ 182
>gi|402913757|ref|XP_003919330.1| PREDICTED: 40S ribosomal protein S3-like [Papio anubis]
Length = 243
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|242785057|ref|XP_002480514.1| 40S ribosomal protein S3 [Talaromyces stipitatus ATCC 10500]
gi|218720661|gb|EED20080.1| 40S ribosomal protein S3, putative [Talaromyces stipitatus ATCC
10500]
Length = 266
Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/109 (73%), Positives = 88/109 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEV+VSGKLRA RA SMKF DG+MI SG P KE+IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQ 182
>gi|12848978|dbj|BAB28159.1| unnamed protein product [Mus musculus]
Length = 243
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|392880630|gb|AFM89147.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|348522975|ref|XP_003448999.1| PREDICTED: 40S ribosomal protein S3-like [Oreochromis niloticus]
Length = 245
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|13097759|gb|AAH03577.1| Unknown (protein for IMAGE:3544292), partial [Homo sapiens]
gi|15341992|gb|AAH13196.1| Unknown (protein for IMAGE:4347401), partial [Homo sapiens]
Length = 242
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 70 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 129
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 130 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 179
>gi|392873892|gb|AFM85778.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|327281458|ref|XP_003225465.1| PREDICTED: 40S ribosomal protein S3-like [Anolis carolinensis]
Length = 243
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|12847921|dbj|BAB27761.1| unnamed protein product [Mus musculus]
Length = 243
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|295314928|gb|ADF97614.1| ribosomal protein S3B [Hypophthalmichthys molitrix]
Length = 245
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|392881646|gb|AFM89655.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|392881092|gb|AFM89378.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|392877878|gb|AFM87771.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|392873570|gb|AFM85617.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392873790|gb|AFM85727.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392874028|gb|AFM85846.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392874738|gb|AFM86201.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392874910|gb|AFM86287.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392875972|gb|AFM86818.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876244|gb|AFM86954.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876330|gb|AFM86997.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876834|gb|AFM87249.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392879612|gb|AFM88638.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881068|gb|AFM89366.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881436|gb|AFM89550.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392882158|gb|AFM89911.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392882756|gb|AFM90210.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392884244|gb|AFM90954.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|308323395|gb|ADO28834.1| 40S ribosomal protein s3 [Ictalurus punctatus]
Length = 245
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|255942573|ref|XP_002562055.1| Pc18g02110 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586788|emb|CAP94435.1| Pc18g02110 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 264
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P KE+IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQG 183
>gi|392875182|gb|AFM86423.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876076|gb|AFM86870.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876116|gb|AFM86890.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392877034|gb|AFM87349.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392877852|gb|AFM87758.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392878058|gb|AFM87861.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392878198|gb|AFM87931.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392878664|gb|AFM88164.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392880050|gb|AFM88857.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392880832|gb|AFM89248.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881218|gb|AFM89441.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881252|gb|AFM89458.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881368|gb|AFM89516.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392883684|gb|AFM90674.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|281353139|gb|EFB28723.1| hypothetical protein PANDA_003327 [Ailuropoda melanoleuca]
Length = 233
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 61 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 170
>gi|6755372|ref|NP_036182.1| 40S ribosomal protein S3 [Mus musculus]
gi|57164151|ref|NP_001009239.1| 40S ribosomal protein S3 [Rattus norvegicus]
gi|57102362|ref|XP_534008.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Canis lupus
familiaris]
gi|149719291|ref|XP_001494894.1| PREDICTED: 40S ribosomal protein S3-like [Equus caballus]
gi|291384249|ref|XP_002708735.1| PREDICTED: ribosomal protein S3-like [Oryctolagus cuniculus]
gi|301759004|ref|XP_002915347.1| PREDICTED: 40S ribosomal protein S3-like [Ailuropoda melanoleuca]
gi|344296780|ref|XP_003420081.1| PREDICTED: 40S ribosomal protein S3-like [Loxodonta africana]
gi|348555219|ref|XP_003463421.1| PREDICTED: 40S ribosomal protein S3-like [Cavia porcellus]
gi|410972647|ref|XP_003992770.1| PREDICTED: 40S ribosomal protein S3 [Felis catus]
gi|51703302|sp|P62909.1|RS3_RAT RecName: Full=40S ribosomal protein S3
gi|51703309|sp|P62908.1|RS3_MOUSE RecName: Full=40S ribosomal protein S3
gi|325530283|sp|E2RH47.1|RS3_CANFA RecName: Full=40S ribosomal protein S3
gi|57728|emb|CAA35916.1| unnamed protein product [Rattus rattus]
gi|439522|emb|CAA54167.1| ribosomal protein S3 [Mus musculus]
gi|12833687|dbj|BAB22624.1| unnamed protein product [Mus musculus]
gi|12846127|dbj|BAB27042.1| unnamed protein product [Mus musculus]
gi|12848850|dbj|BAB28111.1| unnamed protein product [Mus musculus]
gi|14715107|gb|AAH10721.1| Ribosomal protein S3 [Mus musculus]
gi|15421127|gb|AAK95377.1| ribosomal protein S3 [Mus musculus]
gi|26341816|dbj|BAC34570.1| unnamed protein product [Mus musculus]
gi|56970487|gb|AAH88450.1| Ribosomal protein S3 [Rattus norvegicus]
gi|74137630|dbj|BAE35844.1| unnamed protein product [Mus musculus]
gi|74138495|dbj|BAE38059.1| unnamed protein product [Mus musculus]
gi|74146996|dbj|BAE27438.1| unnamed protein product [Mus musculus]
gi|74177801|dbj|BAE38991.1| unnamed protein product [Mus musculus]
gi|74190989|dbj|BAE39337.1| unnamed protein product [Mus musculus]
gi|74191087|dbj|BAE39379.1| unnamed protein product [Mus musculus]
gi|74195112|dbj|BAE28299.1| unnamed protein product [Mus musculus]
gi|74197190|dbj|BAE35140.1| unnamed protein product [Mus musculus]
gi|74211022|dbj|BAE37615.1| unnamed protein product [Mus musculus]
gi|74223053|dbj|BAE40668.1| unnamed protein product [Mus musculus]
gi|148684445|gb|EDL16392.1| ribosomal protein S3, isoform CRA_g [Mus musculus]
gi|149068850|gb|EDM18402.1| rCG40478, isoform CRA_l [Rattus norvegicus]
gi|327239238|gb|AEA39486.1| ribosomal protein S3 [Ailuropoda melanoleuca]
gi|327239330|gb|AEA39532.1| ribosomal protein S3 [Ailuropoda melanoleuca]
gi|431838442|gb|ELK00374.1| 40S ribosomal protein S3 [Pteropus alecto]
gi|444731541|gb|ELW71894.1| 40S ribosomal protein S3 [Tupaia chinensis]
Length = 243
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|169764753|ref|XP_001816848.1| 40S ribosomal protein S3 [Aspergillus oryzae RIB40]
gi|238503978|ref|XP_002383221.1| 40S ribosomal protein S3 [Aspergillus flavus NRRL3357]
gi|83764702|dbj|BAE54846.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220690692|gb|EED47041.1| 40S ribosomal protein S3, putative [Aspergillus flavus NRRL3357]
gi|391863281|gb|EIT72592.1| 40S ribosomal protein [Aspergillus oryzae 3.042]
Length = 266
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P KE+IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQG 183
>gi|47211107|emb|CAF94963.1| unnamed protein product [Tetraodon nigroviridis]
Length = 245
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|145254885|ref|XP_001398791.1| 40S ribosomal protein S3 [Aspergillus niger CBS 513.88]
gi|134084376|emb|CAK48715.1| unnamed protein product [Aspergillus niger]
gi|350630615|gb|EHA18987.1| hypothetical protein ASPNIDRAFT_202416 [Aspergillus niger ATCC
1015]
gi|358366728|dbj|GAA83348.1| 40S ribosomal protein S3 [Aspergillus kawachii IFO 4308]
Length = 266
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/109 (73%), Positives = 88/109 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEV+VSGKLRA RA SMKF DG+MI SG P KE+IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQ 182
>gi|126327841|ref|XP_001362617.1| PREDICTED: 40S ribosomal protein S3-like [Monodelphis domestica]
Length = 243
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|425768995|gb|EKV07505.1| hypothetical protein PDIP_73820 [Penicillium digitatum Pd1]
gi|425770579|gb|EKV09048.1| hypothetical protein PDIG_64480 [Penicillium digitatum PHI26]
Length = 264
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P KE+IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQG 183
>gi|90080277|dbj|BAE89620.1| unnamed protein product [Macaca fascicularis]
Length = 243
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|15718687|ref|NP_000996.2| 40S ribosomal protein S3 isoform 1 [Homo sapiens]
gi|77404290|ref|NP_001029219.1| 40S ribosomal protein S3 [Bos taurus]
gi|113205854|ref|NP_001038066.1| 40S ribosomal protein S3 [Sus scrofa]
gi|293331917|ref|NP_001168943.1| uncharacterized protein LOC100382757 [Zea mays]
gi|354622982|ref|NP_001238928.1| 40S ribosomal protein S3 [Pan troglodytes]
gi|378548190|ref|NP_001243731.1| 40S ribosomal protein S3 isoform 1 [Homo sapiens]
gi|388453034|ref|NP_001253219.1| 40S ribosomal protein S3 [Macaca mulatta]
gi|395814830|ref|XP_003780943.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Otolemur garnettii]
gi|395814832|ref|XP_003780944.1| PREDICTED: 40S ribosomal protein S3 isoform 2 [Otolemur garnettii]
gi|395814834|ref|XP_003780945.1| PREDICTED: 40S ribosomal protein S3 isoform 3 [Otolemur garnettii]
gi|395814836|ref|XP_003780946.1| PREDICTED: 40S ribosomal protein S3 isoform 4 [Otolemur garnettii]
gi|397487317|ref|XP_003814749.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Pan paniscus]
gi|397487319|ref|XP_003814750.1| PREDICTED: 40S ribosomal protein S3 isoform 2 [Pan paniscus]
gi|402894681|ref|XP_003910477.1| PREDICTED: 40S ribosomal protein S3 [Papio anubis]
gi|403262289|ref|XP_003923526.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403262291|ref|XP_003923527.1| PREDICTED: 40S ribosomal protein S3 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403262293|ref|XP_003923528.1| PREDICTED: 40S ribosomal protein S3 isoform 3 [Saimiri boliviensis
boliviensis]
gi|426245151|ref|XP_004016377.1| PREDICTED: 40S ribosomal protein S3 [Ovis aries]
gi|417719|sp|P23396.2|RS3_HUMAN RecName: Full=40S ribosomal protein S3
gi|91207641|sp|Q3T169.1|RS3_BOVIN RecName: Full=40S ribosomal protein S3
gi|115502828|sp|Q0Z8U2.1|RS3_PIG RecName: Full=40S ribosomal protein S3
gi|187609257|pdb|2ZKQ|CC Chain c, Structure Of A Mammalian Ribosomal 40s Subunit Within An
80s Complex Obtained By Docking Homology Models Of The
Rna And Proteins Into An 8.7 A Cryo-Em Map
gi|555941|gb|AAB60336.1| ribosomal protein S3 [Homo sapiens]
gi|555943|gb|AAB60337.1| ribosomal protein S3 [Homo sapiens]
gi|555945|gb|AAB60338.1| ribosomal protein S3 [Homo sapiens]
gi|13111933|gb|AAH03137.1| Ribosomal protein S3 [Homo sapiens]
gi|17932970|dbj|BAB79476.1| ribosomal protein S3 [Homo sapiens]
gi|21707655|gb|AAH34149.1| Ribosomal protein S3 [Homo sapiens]
gi|48734761|gb|AAH71917.1| Ribosomal protein S3 [Homo sapiens]
gi|54781367|gb|AAV40835.1| ribosomal protein S3 [Homo sapiens]
gi|72679750|gb|AAI00285.1| Ribosomal protein S3 [Homo sapiens]
gi|74268226|gb|AAI02091.1| Ribosomal protein S3 [Bos taurus]
gi|110006645|gb|ABG48767.1| ribosomal protein S3 [Sus scrofa]
gi|119595369|gb|EAW74963.1| ribosomal protein S3 [Homo sapiens]
gi|123987601|gb|ABM83814.1| ribosomal protein S3 [synthetic construct]
gi|123999104|gb|ABM87135.1| ribosomal protein S3 [synthetic construct]
gi|189053630|dbj|BAG35882.1| unnamed protein product [Homo sapiens]
gi|208967330|dbj|BAG73679.1| ribosomal protein S3 [synthetic construct]
gi|223973891|gb|ACN31133.1| unknown [Zea mays]
gi|296479794|tpg|DAA21909.1| TPA: 40S ribosomal protein S3 [Bos taurus]
gi|387542628|gb|AFJ71941.1| 40S ribosomal protein S3 [Macaca mulatta]
gi|440899677|gb|ELR50946.1| 40S ribosomal protein S3 [Bos grunniens mutus]
Length = 243
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|7765076|gb|AAB19349.2| S3 ribosomal protein [Homo sapiens]
Length = 243
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|432889332|ref|XP_004075224.1| PREDICTED: 40S ribosomal protein S3-like [Oryzias latipes]
Length = 245
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|351696964|gb|EHA99882.1| 40S ribosomal protein S3 [Heterocephalus glaber]
Length = 243
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|417409029|gb|JAA51041.1| Putative 40s ribosomal protein s3, partial [Desmodus rotundus]
Length = 251
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 79 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 138
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 139 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 188
>gi|121702671|ref|XP_001269600.1| 40S ribosomal protein S3 [Aspergillus clavatus NRRL 1]
gi|119397743|gb|EAW08174.1| 40S ribosomal protein S3, putative [Aspergillus clavatus NRRL 1]
Length = 267
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/109 (73%), Positives = 88/109 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEV+VSGKLRA RA SMKF DG+MI SG P KE+IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQ 182
>gi|392880950|gb|AFM89307.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|392876674|gb|AFM87169.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|392873640|gb|AFM85652.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|293333308|ref|NP_001169131.1| uncharacterized protein LOC100382976 [Zea mays]
gi|223975097|gb|ACN31736.1| unknown [Zea mays]
Length = 266
Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P KE+IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQG 183
>gi|147903619|ref|NP_001085315.1| 40S ribosomal protein S3-B [Xenopus laevis]
gi|1350988|sp|P47835.1|RS32_XENLA RecName: Full=40S ribosomal protein S3-B; AltName: Full=S1B
gi|587600|emb|CAA84291.1| ribosomal protein S1 [Xenopus laevis]
gi|587602|emb|CAA84290.1| ribosomal protein [Xenopus laevis]
Length = 246
Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|392873614|gb|AFM85639.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVSYYVDTAVRHVLLRQG 180
>gi|350537143|ref|NP_001232278.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128026|gb|ACH44524.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128027|gb|ACH44525.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128028|gb|ACH44526.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128029|gb|ACH44527.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|449284051|gb|EMC90633.1| 40S ribosomal protein S3 [Columba livia]
Length = 243
Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|44968137|gb|AAS49584.1| ribosomal protein S3 [Gallus gallus]
Length = 211
Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 61 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 170
>gi|155369251|ref|NP_001094409.1| 40S ribosomal protein S3-A [Xenopus laevis]
gi|133940|sp|P02350.2|RS31_XENLA RecName: Full=40S ribosomal protein S3-A; AltName: Full=S1A
gi|65091|emb|CAA40592.1| ribosomal protein S1a [Xenopus laevis]
gi|27769401|gb|AAH42230.1| Ribosomal protein S1a protein [Xenopus laevis]
Length = 246
Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|212527956|ref|XP_002144135.1| 40S ribosomal protein S3 [Talaromyces marneffei ATCC 18224]
gi|210073533|gb|EEA27620.1| 40S ribosomal protein S3, putative [Talaromyces marneffei ATCC
18224]
Length = 266
Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P KE+IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQG 183
>gi|148684446|gb|EDL16393.1| ribosomal protein S3, isoform CRA_h [Mus musculus]
Length = 223
Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|46811251|gb|AAT01919.1| 40S ribosomal protein S3 [Pseudopleuronectes americanus]
Length = 246
Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|355752470|gb|EHH56590.1| hypothetical protein EGM_06037 [Macaca fascicularis]
Length = 243
Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|27735393|gb|AAH41299.1| Rpls3-b protein [Xenopus laevis]
gi|213626632|gb|AAI69756.1| Rpls3-b protein [Xenopus laevis]
gi|213627669|gb|AAI69758.1| Rpls3-b protein [Xenopus laevis]
Length = 246
Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|45360887|ref|NP_989119.1| ribosomal protein S3 [Xenopus (Silurana) tropicalis]
gi|38512247|gb|AAH61265.1| ribosomal protein S3 [Xenopus (Silurana) tropicalis]
gi|89271265|emb|CAJ82962.1| ribosomal protein S3 [Xenopus (Silurana) tropicalis]
Length = 246
Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|115389474|ref|XP_001212242.1| 40S ribosomal protein S3 [Aspergillus terreus NIH2624]
gi|114194638|gb|EAU36338.1| 40S ribosomal protein S3 [Aspergillus terreus NIH2624]
Length = 263
Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 71 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P KE+IDSA RHVL RQ
Sbjct: 131 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQG 180
>gi|261197469|ref|XP_002625137.1| 40S ribosomal protein S3 [Ajellomyces dermatitidis SLH14081]
gi|239595767|gb|EEQ78348.1| 40S ribosomal protein S3 [Ajellomyces dermatitidis SLH14081]
gi|239606762|gb|EEQ83749.1| 40S ribosomal protein S3 [Ajellomyces dermatitidis ER-3]
gi|327351227|gb|EGE80084.1| hypothetical protein BDDG_03025 [Ajellomyces dermatitidis ATCC
18188]
Length = 270
Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 89/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG PV+++IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQG 183
>gi|149068848|gb|EDM18400.1| rCG40478, isoform CRA_j [Rattus norvegicus]
Length = 277
Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|148684442|gb|EDL16389.1| ribosomal protein S3, isoform CRA_d [Mus musculus]
Length = 251
Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|387018380|gb|AFJ51308.1| 40S ribosomal protein S3-like [Crotalus adamanteus]
Length = 243
Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEASVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|225556722|gb|EEH05010.1| 40S ribosomal protein S3 [Ajellomyces capsulatus G186AR]
Length = 271
Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 89/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG PV+++IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQG 183
>gi|44967154|gb|AAS49565.1| ribosomal protein S3 [Latimeria chalumnae]
Length = 211
Score = 164 bits (415), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 61 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 170
>gi|152061033|gb|AAI50502.1| RPS3 protein [Homo sapiens]
Length = 133
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 15 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 74
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 75 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 124
>gi|149068844|gb|EDM18396.1| rCG40478, isoform CRA_f [Rattus norvegicus]
Length = 181
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|328683380|emb|CBL52984.1| ribosomal protein S3 [Plecoglossus altivelis]
Length = 245
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE +VELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGTVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|295670700|ref|XP_002795897.1| 40S ribosomal protein S3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284030|gb|EEH39596.1| 40S ribosomal protein S3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 270
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 89/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG PV+++IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQG 183
>gi|226289773|gb|EEH45257.1| 40S ribosomal protein S3 [Paracoccidioides brasiliensis Pb18]
Length = 270
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 89/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG PV+++IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQG 183
>gi|70909551|emb|CAJ17197.1| ribosomal protein S3e [Scarabaeus laticollis]
Length = 241
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPE+SVELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 71 SVVQKRFNFPEHSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P +Y+D+A RHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
>gi|340522228|gb|EGR52461.1| 40s ribosomal protein [Trichoderma reesei QM6a]
Length = 264
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 79/109 (72%), Positives = 88/109 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 182
>gi|379072588|gb|AFC92926.1| ribosomal protein S3B, partial [Pipa carvalhoi]
gi|379072590|gb|AFC92927.1| ribosomal protein S3B, partial [Rhinophrynus dorsalis]
Length = 162
Score = 164 bits (415), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 6 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 65
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 66 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 115
>gi|149068847|gb|EDM18399.1| rCG40478, isoform CRA_i [Rattus norvegicus]
Length = 189
Score = 164 bits (415), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|225682378|gb|EEH20662.1| 40S ribosomal protein S3 [Paracoccidioides brasiliensis Pb03]
Length = 261
Score = 164 bits (415), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 89/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 65 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG PV+++IDSA RHVL RQ
Sbjct: 125 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQG 174
>gi|440639340|gb|ELR09259.1| small subunit ribosomal protein S3e [Geomyces destructans 20631-21]
Length = 262
Score = 164 bits (415), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 76 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 135
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++IDSA RHVL RQ
Sbjct: 136 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQG 185
>gi|402086493|gb|EJT81391.1| 40S ribosomal protein S3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 263
Score = 164 bits (414), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/109 (72%), Positives = 88/109 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 182
>gi|322693782|gb|EFY85631.1| 40S ribosomal protein S3, putative [Metarhizium acridum CQMa 102]
Length = 255
Score = 164 bits (414), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 72 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P KE+ID+A RHVL RQ
Sbjct: 132 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDTATRHVLLRQG 181
>gi|380470676|emb|CCF47635.1| 40S ribosomal protein S3 [Colletotrichum higginsianum]
Length = 261
Score = 164 bits (414), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQG 183
>gi|44967199|gb|AAS49566.1| ribosomal protein S3 [Protopterus dolloi]
Length = 211
Score = 164 bits (414), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 61 AVVQKRFGFPEASVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 170
>gi|322709405|gb|EFZ00981.1| cytoplasmic ribosomal protein subunit S3 [Metarhizium anisopliae
ARSEF 23]
Length = 257
Score = 164 bits (414), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P KE+ID+A RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDTATRHVLLRQG 183
>gi|310793027|gb|EFQ28488.1| ribosomal protein S3 [Glomerella graminicola M1.001]
Length = 261
Score = 164 bits (414), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQG 183
>gi|302904072|ref|XP_003048997.1| 40S ribosomal protein S3 [Nectria haematococca mpVI 77-13-4]
gi|256729931|gb|EEU43284.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 260
Score = 164 bits (414), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQG 183
>gi|119187711|ref|XP_001244462.1| 40S ribosomal protein S3 [Coccidioides immitis RS]
gi|303316826|ref|XP_003068415.1| 40S ribosomal protein S3 [Coccidioides posadasii C735 delta SOWgp]
gi|240108096|gb|EER26270.1| 40S ribosomal protein S3, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320038258|gb|EFW20194.1| 40S ribosomal protein S3 [Coccidioides posadasii str. Silveira]
gi|392871183|gb|EAS33062.2| 40S ribosomal protein [Coccidioides immitis RS]
Length = 263
Score = 164 bits (414), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQG 183
>gi|223646682|gb|ACN10099.1| 40S ribosomal protein S3 [Salmo salar]
gi|223672531|gb|ACN12447.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 164 bits (414), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
+KGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 SKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|50344456|emb|CAH04314.1| S3e ribosomal protein [Carabus granulatus]
Length = 239
Score = 164 bits (414), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPE+SVELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 71 SVVQKRFSFPEHSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P +Y+D+A RHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
>gi|209733852|gb|ACI67795.1| 40S ribosomal protein S3 [Salmo salar]
Length = 250
Score = 164 bits (414), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 76 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 135
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
+KGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 136 SKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 185
>gi|164429154|ref|XP_956174.2| 40S ribosomal protein S3 [Neurospora crassa OR74A]
gi|157072430|gb|EAA26938.2| cytoplasmic ribosomal protein subunit S3 [Neurospora crassa OR74A]
gi|336470035|gb|EGO58197.1| cytoplasmic ribosomal protein subunit S3 [Neurospora tetrasperma
FGSC 2508]
gi|350290273|gb|EGZ71487.1| cytoplasmic ribosomal protein subunit S3 [Neurospora tetrasperma
FGSC 2509]
Length = 262
Score = 164 bits (414), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQG 183
>gi|336268268|ref|XP_003348899.1| 40S ribosomal protein S3 [Sordaria macrospora k-hell]
gi|380094158|emb|CCC08375.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 262
Score = 164 bits (414), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQG 183
>gi|3642663|gb|AAC36521.1| ribosomal protein S3, partial [Mus musculus]
Length = 123
Score = 164 bits (414), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 6 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 65
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 66 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 115
>gi|358383594|gb|EHK21258.1| hypothetical protein TRIVIDRAFT_78477 [Trichoderma virens Gv29-8]
Length = 263
Score = 164 bits (414), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 79/109 (72%), Positives = 88/109 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 182
>gi|367049518|ref|XP_003655138.1| 40S ribosomal protein S3 [Thielavia terrestris NRRL 8126]
gi|347002402|gb|AEO68802.1| hypothetical protein THITE_2155431 [Thielavia terrestris NRRL 8126]
Length = 260
Score = 164 bits (414), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQG 183
>gi|429856532|gb|ELA31437.1| 40s ribosomal protein s3 [Colletotrichum gloeosporioides Nara gc5]
Length = 259
Score = 164 bits (414), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQG 183
>gi|358397895|gb|EHK47263.1| hypothetical protein TRIATDRAFT_298935 [Trichoderma atroviride IMI
206040]
Length = 264
Score = 164 bits (414), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQG 183
>gi|320592132|gb|EFX04571.1| 40S ribosomal protein s3 [Grosmannia clavigera kw1407]
Length = 264
Score = 164 bits (414), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQG 183
>gi|171686174|ref|XP_001908028.1| hypothetical protein [Podospora anserina S mat+]
gi|170943048|emb|CAP68701.1| unnamed protein product [Podospora anserina S mat+]
Length = 262
Score = 164 bits (414), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQG 183
>gi|116207712|ref|XP_001229665.1| 40S ribosomal protein S3 [Chaetomium globosum CBS 148.51]
gi|88183746|gb|EAQ91214.1| 40S ribosomal protein S3 [Chaetomium globosum CBS 148.51]
Length = 260
Score = 164 bits (414), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQG 183
>gi|367027792|ref|XP_003663180.1| hypothetical protein MYCTH_2315249 [Myceliophthora thermophila ATCC
42464]
gi|347010449|gb|AEO57935.1| hypothetical protein MYCTH_2315249 [Myceliophthora thermophila ATCC
42464]
Length = 260
Score = 163 bits (413), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQG 183
>gi|258576671|ref|XP_002542517.1| 40S ribosomal protein S3 [Uncinocarpus reesii 1704]
gi|237902783|gb|EEP77184.1| 40S ribosomal protein S3 [Uncinocarpus reesii 1704]
Length = 263
Score = 163 bits (413), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQG 183
>gi|326901602|gb|AEA10079.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
Length = 194
Score = 163 bits (413), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 4 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 63
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++IDSA RHVL RQ
Sbjct: 64 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQG 113
>gi|392588527|gb|EIW77859.1| 40S ribosomal protein S3 [Coniophora puteana RWD-64-598 SS2]
Length = 267
Score = 163 bits (413), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 77/107 (71%), Positives = 90/107 (84%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFKFPEN++ELYAEKV +RGL A+AQAESLR + L + + ACYG+LRFIMESGAK
Sbjct: 73 VQKRFKFPENALELYAEKVQHRGLSAVAQAESLRYKLLGGLAVRRACYGILRFIMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV+VSGKLRA RA SMKF DG+MI SG P K+++D AVRHVL RQ
Sbjct: 133 GCEVVVSGKLRAARAKSMKFTDGFMIHSGQPSKDFVDYAVRHVLLRQ 179
>gi|326901586|gb|AEA10071.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901588|gb|AEA10072.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901590|gb|AEA10073.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901592|gb|AEA10074.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901594|gb|AEA10075.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901596|gb|AEA10076.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901598|gb|AEA10077.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901600|gb|AEA10078.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901604|gb|AEA10080.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901606|gb|AEA10081.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901608|gb|AEA10082.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901610|gb|AEA10083.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901612|gb|AEA10084.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901614|gb|AEA10085.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901616|gb|AEA10086.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901618|gb|AEA10087.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901620|gb|AEA10088.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901622|gb|AEA10089.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901624|gb|AEA10090.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901626|gb|AEA10091.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901628|gb|AEA10092.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901630|gb|AEA10093.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901632|gb|AEA10094.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901634|gb|AEA10095.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901636|gb|AEA10096.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901638|gb|AEA10097.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901640|gb|AEA10098.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901642|gb|AEA10099.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901644|gb|AEA10100.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901646|gb|AEA10101.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901648|gb|AEA10102.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901650|gb|AEA10103.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901652|gb|AEA10104.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901654|gb|AEA10105.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901656|gb|AEA10106.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901658|gb|AEA10107.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901660|gb|AEA10108.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901662|gb|AEA10109.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901664|gb|AEA10110.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901666|gb|AEA10111.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901668|gb|AEA10112.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901670|gb|AEA10113.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901672|gb|AEA10114.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901674|gb|AEA10115.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901676|gb|AEA10116.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901678|gb|AEA10117.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901680|gb|AEA10118.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901682|gb|AEA10119.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901684|gb|AEA10120.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901686|gb|AEA10121.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901688|gb|AEA10122.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901690|gb|AEA10123.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901692|gb|AEA10124.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901694|gb|AEA10125.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901696|gb|AEA10126.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901698|gb|AEA10127.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901700|gb|AEA10128.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901702|gb|AEA10129.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901704|gb|AEA10130.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901706|gb|AEA10131.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901708|gb|AEA10132.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901710|gb|AEA10133.1| 40S ribosomal protein S3 [Leptographium terebrantis]
gi|326901712|gb|AEA10134.1| 40S ribosomal protein S3 [Leptographium terebrantis]
gi|326901714|gb|AEA10135.1| 40S ribosomal protein S3 [Leptographium terebrantis]
gi|326901716|gb|AEA10136.1| 40S ribosomal protein S3 [Leptographium longiclavatum]
gi|326901718|gb|AEA10137.1| 40S ribosomal protein S3 [Leptographium longiclavatum]
gi|326901720|gb|AEA10138.1| 40S ribosomal protein S3 [Leptographium wingfieldii]
gi|326901722|gb|AEA10139.1| 40S ribosomal protein S3 [Leptographium wingfieldii]
gi|326901724|gb|AEA10140.1| 40S ribosomal protein S3 [Grosmannia aurea]
Length = 194
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 4 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 63
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++IDSA RHVL RQ
Sbjct: 64 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQG 113
>gi|392873496|gb|AFM85580.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SM+F DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMEFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|2500399|sp|P79891.1|RS3_AMBME RecName: Full=40S ribosomal protein S3
gi|1836060|gb|AAB46849.1| ribosomal protein S3 [Ambystoma mexicanum]
Length = 253
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
+KGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 SKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|28189605|dbj|BAC56417.1| similar to ribosomal protein S3 [Bos taurus]
Length = 206
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|197101391|ref|NP_001127020.1| 40S ribosomal protein S3 [Pongo abelii]
gi|75061590|sp|Q5R465.1|RS3_PONAB RecName: Full=40S ribosomal protein S3
gi|55733547|emb|CAH93451.1| hypothetical protein [Pongo abelii]
gi|62897657|dbj|BAD96768.1| ribosomal protein S3 variant [Homo sapiens]
Length = 243
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAE+V RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|148684439|gb|EDL16386.1| ribosomal protein S3, isoform CRA_a [Mus musculus]
Length = 135
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 25 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 84
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 85 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 134
>gi|74219656|dbj|BAE29595.1| unnamed protein product [Mus musculus]
Length = 243
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQ+RF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQERFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|41056077|ref|NP_957447.1| 40S ribosomal protein S3 [Danio rerio]
gi|28374213|gb|AAH45902.1| Ribosomal protein S3 [Danio rerio]
gi|182891740|gb|AAI65099.1| Rps3 protein [Danio rerio]
Length = 245
Score = 163 bits (413), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE VELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGGVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|358056010|dbj|GAA98355.1| hypothetical protein E5Q_05041 [Mixia osmundae IAM 14324]
Length = 270
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKF E SVELYAEKV NRGL AIAQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 71 SLVQKRFKFGEGSVELYAEKVQNRGLSAIAQCESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++ID AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDQAVRHVLLRQG 180
>gi|335345828|gb|AEH41494.1| 40S ribosomal protein S3 [Endocarpon pusillum]
Length = 264
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P KE+IDSA RHV RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVFLRQG 183
>gi|149287156|gb|ABR23477.1| 40S ribosomal protein S3 [Ornithodoros parkeri]
Length = 240
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 89/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPEN+VELYAEKV +RGLCAIAQ ESLR + + + + ACYGVLRFIMESG
Sbjct: 71 SVVQKRFSFPENTVELYAEKVASRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P +Y+++AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVETAVRHVLLRQG 180
>gi|74222288|dbj|BAE26946.1| unnamed protein product [Mus musculus]
Length = 243
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGC+V+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCKVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|78190655|gb|ABB29649.1| ribosomal protein 3 small subunit [Suberites fuscus]
Length = 176
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FP+ +VELYAEKV RGLCAIAQ ESLR + + + + ACYGVLRFIMESG
Sbjct: 37 AVVQKRFSFPDGTVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESG 96
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLR QRA SMKF DG+MI SGYP +EYIDSAV HV RQ
Sbjct: 97 AKGCEVIVSGKLRGQRAKSMKFVDGFMIHSGYPTREYIDSAVTHVHLRQG 146
>gi|340959617|gb|EGS20798.1| 40S ribosomal protein S3-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 254
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P +E+ID+A RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAREFIDTATRHVLLRQG 183
>gi|40643020|emb|CAD91437.1| ribosomal protein S3 [Crassostrea gigas]
Length = 187
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPE +VELYAEKV RGLCAIAQ ESLR + + + + ACYGVLRFIMESG
Sbjct: 72 SVVQKRFNFPEGTVELYAEKVAQRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P+ +Y+D+AVRHVL RQ
Sbjct: 132 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPINDYVDTAVRHVLLRQG 181
>gi|121543809|gb|ABM55569.1| putative ribosomal protein S3 [Maconellicoccus hirsutus]
Length = 248
Score = 163 bits (412), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFP+ S+ELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 71 SVVQKRFKFPDGSIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P +Y+D+A RHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPCVDYVDTATRHVLLRQG 180
>gi|302695173|ref|XP_003037265.1| 40S ribosomal protein S3 [Schizophyllum commune H4-8]
gi|300110962|gb|EFJ02363.1| hypothetical protein SCHCODRAFT_84144 [Schizophyllum commune H4-8]
Length = 266
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 90/110 (81%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPENS+ELYAEKV RGL AIAQ ESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SLVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG PV++++D AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFVDFAVRHVLLRQG 180
>gi|166952343|gb|ABZ04254.1| ribosomal protein rps3 [Lineus viridis]
Length = 213
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPE++VELYAEKV RGLCAIAQ ESLR + + + + ACYGVLRFIMESG
Sbjct: 71 SVVQKRFSFPESTVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P +Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPTNDYVDTAVRHVLLRQG 180
>gi|197632571|gb|ACH71009.1| ribosomal protein S3-2 [Salmo salar]
gi|209732816|gb|ACI67277.1| 40S ribosomal protein S3 [Salmo salar]
gi|223647360|gb|ACN10438.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
++GCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 SRGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|319004942|ref|NP_001187068.1| 40S ribosomal protein S3 [Ictalurus punctatus]
gi|22001962|sp|Q90YS2.1|RS3_ICTPU RecName: Full=40S ribosomal protein S3
gi|15294015|gb|AAK95184.1|AF402810_1 40S ribosomal protein S3 [Ictalurus punctatus]
Length = 245
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FP SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPRGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|28630191|gb|AAN77884.1| ribosomal protein S3 [Scyliorhinus canicula]
Length = 211
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE VELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 61 AVVQKRFGFPEGRVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 170
>gi|392877392|gb|AFM87528.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFI ESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFITESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|197632569|gb|ACH71008.1| ribosomal protein S3-1 [Salmo salar]
gi|209738348|gb|ACI70043.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE +VELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
+KGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 SKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|209732420|gb|ACI67079.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE +VELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
+KGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 SKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|406867161|gb|EKD20200.1| ribosomal protein S3 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 319
Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 135 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 194
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++ID A RHVL RQ
Sbjct: 195 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQG 244
>gi|296217041|ref|XP_002754860.1| PREDICTED: 40S ribosomal protein S3-like isoform 1 [Callithrix
jacchus]
gi|390470016|ref|XP_003734218.1| PREDICTED: 40S ribosomal protein S3-like isoform 2 [Callithrix
jacchus]
gi|390470018|ref|XP_003734219.1| PREDICTED: 40S ribosomal protein S3-like isoform 3 [Callithrix
jacchus]
gi|390470020|ref|XP_003734220.1| PREDICTED: 40S ribosomal protein S3-like isoform 4 [Callithrix
jacchus]
Length = 243
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMES
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESS 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|409083492|gb|EKM83849.1| hypothetical protein AGABI1DRAFT_32206 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 673
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 78/108 (72%), Positives = 89/108 (82%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFKFPENS+ELYAEKV RGL AIAQ ESLR + L + + ACYGVLRF+MESGAK
Sbjct: 481 VQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACYGVLRFVMESGAK 540
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLRA RA SMKF DG+MI SG PV+E++D AVRHVL +Q
Sbjct: 541 GCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVREFVDYAVRHVLLKQG 588
>gi|61654704|gb|AAX48878.1| S3 [Suberites domuncula]
Length = 246
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FP+ +VELYAEKV RGLCAIAQ ESLR + + + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPDGTVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLR QRA SMKF DG+MI SG+P KEYIDSAV HV RQ
Sbjct: 131 AKGCEVIVSGKLRGQRAKSMKFVDGFMIHSGFPTKEYIDSAVTHVHLRQG 180
>gi|355567874|gb|EHH24215.1| hypothetical protein EGK_07837 [Macaca mulatta]
Length = 207
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S V+KRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVL+FIMESG
Sbjct: 35 SGVEKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLQFIMESG 94
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 95 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLFRQG 144
>gi|392878050|gb|AFM87857.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHV RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVSLRQG 180
>gi|28630189|gb|AAN77883.1| ribosomal protein S3 [Myxine glutinosa]
Length = 211
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF FPE +VELYAEKV NRGLCAIAQ ESLR + L + + ACYGVLRFIME+G
Sbjct: 61 SVIQKRFDFPEGNVELYAEKVANRGLCAIAQCESLRYKLLGGLAVRRACYGVLRFIMENG 120
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D A+RHVL RQ
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNHYVDMAIRHVLLRQG 170
>gi|392875076|gb|AFM86370.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SV LYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVGLYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|32532|emb|CAA39248.1| unnamed protein product [Homo sapiens]
Length = 243
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAE LR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|396493922|ref|XP_003844188.1| similar to 40S ribosomal protein S3 [Leptosphaeria maculans JN3]
gi|312220768|emb|CBY00709.1| similar to 40S ribosomal protein S3 [Leptosphaeria maculans JN3]
Length = 264
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++ID A RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQG 183
>gi|408397169|gb|EKJ76319.1| hypothetical protein FPSE_03574 [Fusarium pseudograminearum CS3096]
Length = 260
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++ID A RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQG 183
>gi|361124160|gb|EHK96273.1| putative 40S ribosomal protein S3 [Glarea lozoyensis 74030]
Length = 263
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 76 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 135
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++ID A RHVL RQ
Sbjct: 136 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQG 185
>gi|451997970|gb|EMD90435.1| hypothetical protein COCHEDRAFT_1157448 [Cochliobolus
heterostrophus C5]
Length = 265
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++ID A RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQG 183
>gi|189188112|ref|XP_001930395.1| 40S ribosomal protein S3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330936377|ref|XP_003305367.1| 40S ribosomal protein S3 [Pyrenophora teres f. teres 0-1]
gi|187972001|gb|EDU39500.1| 40S ribosomal protein S3-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311317666|gb|EFQ86553.1| hypothetical protein PTT_18182 [Pyrenophora teres f. teres 0-1]
Length = 266
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++ID A RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQG 183
>gi|302406170|ref|XP_003000921.1| 40S ribosomal protein S3 [Verticillium albo-atrum VaMs.102]
gi|261360179|gb|EEY22607.1| 40S ribosomal protein S3 [Verticillium albo-atrum VaMs.102]
gi|346971436|gb|EGY14888.1| 40S ribosomal protein S3 [Verticillium dahliae VdLs.17]
Length = 262
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++ID A RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQG 183
>gi|169616949|ref|XP_001801889.1| hypothetical protein SNOG_11650 [Phaeosphaeria nodorum SN15]
gi|111059574|gb|EAT80694.1| hypothetical protein SNOG_11650 [Phaeosphaeria nodorum SN15]
Length = 266
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++ID A RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDEATRHVLLRQG 183
>gi|451847106|gb|EMD60414.1| hypothetical protein COCSADRAFT_40058 [Cochliobolus sativus ND90Pr]
Length = 265
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++ID A RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQG 183
>gi|388853822|emb|CCF52543.1| probable 40S ribosomal protein S3 [Ustilago hordei]
Length = 258
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/107 (71%), Positives = 89/107 (83%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFKFPENS+ELYAEKV NRGL A+AQ ESLR + L + + A YGVLRF+MESGAK
Sbjct: 74 VQKRFKFPENSLELYAEKVQNRGLHAVAQCESLRYKLLGGLAVRRAAYGVLRFVMESGAK 133
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV++SGKLRA RA SMKF DG+MI SG PVK+++D AVRHVL +Q
Sbjct: 134 GCEVVISGKLRAARAKSMKFTDGFMIHSGQPVKDFVDEAVRHVLMKQ 180
>gi|392881056|gb|AFM89360.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQK F FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKGFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|46122111|ref|XP_385609.1| hypothetical protein FG05433.1 [Gibberella zeae PH-1]
Length = 255
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 69 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 128
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++ID A RHVL RQ
Sbjct: 129 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQG 178
>gi|342874800|gb|EGU76719.1| hypothetical protein FOXB_12740 [Fusarium oxysporum Fo5176]
Length = 260
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++ID A RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQG 183
>gi|388579652|gb|EIM19973.1| 40S ribosomal protein S3 [Wallemia sebi CBS 633.66]
Length = 244
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 76/108 (70%), Positives = 90/108 (83%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFKFPENS+ELYAEKV NRGL A+AQ ESLR + L + + ACYGV+RFIMESGAK
Sbjct: 76 VQKRFKFPENSLELYAEKVQNRGLSAVAQCESLRYKLLGGLAVRRACYGVVRFIMESGAK 135
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLRA RA +MKF DG+MI SG PV++++D AVRHVL +Q
Sbjct: 136 GCEVVVSGKLRAARAKAMKFTDGFMIHSGQPVRDFVDFAVRHVLLKQG 183
>gi|198434172|ref|XP_002129244.1| PREDICTED: similar to putative 40S ribosomal protein RPS3 [Ciona
intestinalis]
Length = 260
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/108 (72%), Positives = 88/108 (81%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFKF ++ VELYAEKV NRGLCA AQ ESLR + L + + ACYGVLRFIMESGAK
Sbjct: 73 VQKRFKFKDDGVELYAEKVANRGLCATAQCESLRYKLLGGLAVRRACYGVLRFIMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLR QRA +MKF DG MI SG PV+EY+D+AVRHVL RQ
Sbjct: 133 GCEVVVSGKLRGQRAKAMKFVDGLMIHSGDPVREYVDTAVRHVLLRQG 180
>gi|426202100|gb|EKV52023.1| hypothetical protein AGABI2DRAFT_239505 [Agaricus bisporus var.
bisporus H97]
Length = 265
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/108 (72%), Positives = 89/108 (82%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFKFPENS+ELYAEKV RGL AIAQ ESLR + L + + ACYGVLRF+MESGAK
Sbjct: 73 VQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACYGVLRFVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLRA RA SMKF DG+MI SG PV+E++D AVRHVL +Q
Sbjct: 133 GCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVREFVDYAVRHVLLKQG 180
>gi|83283961|gb|ABC01888.1| 40S ribosomal protein-like protein [Solanum tuberosum]
Length = 240
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/112 (74%), Positives = 90/112 (80%), Gaps = 2/112 (1%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F ENSVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 72 SVVQKRFNFKENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 131
Query: 61 AK-GCEVI-VSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV VSGKLRAQRA SMK DGYMISSG PV +Y+D+AVRHVL RQ
Sbjct: 132 TPTGCEVDSVSGKLRAQRAKSMKSTDGYMISSGLPVSDYVDAAVRHVLLRQG 183
>gi|255081971|ref|XP_002508204.1| predicted protein [Micromonas sp. RCC299]
gi|226523480|gb|ACO69462.1| predicted protein [Micromonas sp. RCC299]
Length = 233
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 89/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F E SVELYAEKV NRGLCAIAQAESLR + L + + ACYGVLRFIME+G
Sbjct: 72 SLVQKRFGFAEGSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMENG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKG EV+VSGKLR QR +MKFKDGYMISSG PV+EYI+SA HVL RQ
Sbjct: 132 AKGAEVVVSGKLRGQRGKAMKFKDGYMISSGNPVREYIESACLHVLLRQG 181
>gi|392873428|gb|AFM85546.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF PE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGSPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|378725981|gb|EHY52440.1| 40S ribosomal protein S3 [Exophiala dermatitidis NIH/UT8656]
Length = 262
Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P E+ID A RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPANEFIDHATRHVLLRQG 183
>gi|407924047|gb|EKG17107.1| Ribosomal protein S3 [Macrophomina phaseolina MS6]
Length = 265
Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 77/109 (70%), Positives = 88/109 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV+NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 75 SLIQKRFKFPENSVSLYAAKVSNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 134
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEV+VSGKLRA RA SMKF DG+MI SG P ++ID+A RHVL RQ
Sbjct: 135 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAHDFIDTATRHVLLRQ 183
>gi|78190549|gb|ABB29596.1| ribosomal protein 3 small subunit [Platynereis dumerilii]
Length = 188
Score = 161 bits (407), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F E +VELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 43 SVVQKRFNFQEGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 102
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P +Y+D+AVRHVL RQ
Sbjct: 103 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPTNDYVDTAVRHVLLRQG 152
>gi|402221674|gb|EJU01742.1| 40S ribosomal protein S3 [Dacryopinax sp. DJM-731 SS1]
Length = 259
Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/108 (71%), Positives = 88/108 (81%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFKFPENS+ELYAEKV NRGL A+AQ ESLR + L + + ACYGVLRF+MES AK
Sbjct: 82 VQKRFKFPENSLELYAEKVQNRGLSAVAQCESLRYKLLGGLAVRRACYGVLRFVMESEAK 141
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEVIVSGKLRA RA SMKF DG+MI SG P ++++D AVRHVL RQ
Sbjct: 142 GCEVIVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQG 189
>gi|327307562|ref|XP_003238472.1| 40S ribosomal protein S3 [Trichophyton rubrum CBS 118892]
gi|326458728|gb|EGD84181.1| 40S ribosomal protein S3 [Trichophyton rubrum CBS 118892]
gi|326470843|gb|EGD94852.1| 40S ribosomal protein S3 [Trichophyton tonsurans CBS 112818]
gi|326478407|gb|EGE02417.1| 40S ribosomal protein S3 [Trichophyton equinum CBS 127.97]
Length = 266
Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 75 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 134
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P +++ID A RHVL RQ
Sbjct: 135 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQG 184
>gi|302508557|ref|XP_003016239.1| hypothetical protein ARB_05637 [Arthroderma benhamiae CBS 112371]
gi|302657285|ref|XP_003020367.1| hypothetical protein TRV_05538 [Trichophyton verrucosum HKI 0517]
gi|291179808|gb|EFE35594.1| hypothetical protein ARB_05637 [Arthroderma benhamiae CBS 112371]
gi|291184196|gb|EFE39749.1| hypothetical protein TRV_05538 [Trichophyton verrucosum HKI 0517]
Length = 266
Score = 161 bits (407), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 75 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 134
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P +++ID A RHVL RQ
Sbjct: 135 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQG 184
>gi|170095049|ref|XP_001878745.1| 40S ribosomal protein S3 [Laccaria bicolor S238N-H82]
gi|164646049|gb|EDR10295.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 262
Score = 160 bits (406), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/107 (71%), Positives = 88/107 (82%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFKFPENS+ELYAEKV RGL AIAQ ESLR + L + + ACYGVLRF+MESGAK
Sbjct: 73 VQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACYGVLRFVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV+VSGKLRA RA SMKF DG+MI SG P ++++D AVRHVL RQ
Sbjct: 133 GCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQ 179
>gi|296825392|ref|XP_002850808.1| 40S ribosomal protein S3 [Arthroderma otae CBS 113480]
gi|238838362|gb|EEQ28024.1| 40S ribosomal protein S3 [Arthroderma otae CBS 113480]
Length = 266
Score = 160 bits (406), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 75 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 134
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P +++ID A RHVL RQ
Sbjct: 135 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQG 184
>gi|225714094|gb|ACO12893.1| 40S ribosomal protein S3 [Lepeophtheirus salmonis]
Length = 237
Score = 160 bits (406), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPENSVELYAEKV RGLCAIAQAESLR + + + + ACYGVLR+IMESG
Sbjct: 71 SVVQKRFSFPENSVELYAEKVAARGLCAIAQAESLRYKLIGGLAVRRACYGVLRYIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+GCEV+VSGKLR QRA SMKF DG MI SG P +Y+D+A RHVL RQ
Sbjct: 131 ARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTACRHVLLRQG 180
>gi|225715464|gb|ACO13578.1| 40S ribosomal protein S3 [Esox lucius]
Length = 247
Score = 160 bits (406), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RG CAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGPCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
+KGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 SKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|315055209|ref|XP_003176979.1| 40S ribosomal protein S3 [Arthroderma gypseum CBS 118893]
gi|311338825|gb|EFQ98027.1| 30S ribosomal protein S14p/S29e [Arthroderma gypseum CBS 118893]
Length = 266
Score = 160 bits (406), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 75 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 134
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P +++ID A RHVL RQ
Sbjct: 135 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQG 184
>gi|72058324|ref|XP_798304.1| PREDICTED: 40S ribosomal protein S3-A-like [Strongylocentrotus
purpuratus]
Length = 279
Score = 160 bits (406), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF F EN+VELYAEKV RGLCAIAQ ESLR + + + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFNFAENTVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PVK+Y+D A+RHV+ RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGAPVKDYVDVAIRHVMLRQG 180
>gi|392875060|gb|AFM86362.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 160 bits (406), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + A YGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRARYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|242005202|ref|XP_002423460.1| 40S ribosomal protein S3, putative [Pediculus humanus corporis]
gi|212506548|gb|EEB10722.1| 40S ribosomal protein S3, putative [Pediculus humanus corporis]
Length = 238
Score = 160 bits (406), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPE +VELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 71 SVVQKRFNFPEGTVELYAEKVAARGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P +Y+D A RHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVDCATRHVLLRQG 180
>gi|223646268|gb|ACN09892.1| 40S ribosomal protein S3 [Salmo salar]
gi|223672115|gb|ACN12239.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE +VELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPECNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
+KGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 SKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|154301908|ref|XP_001551365.1| 40S ribosomal protein S3 [Botryotinia fuckeliana B05.10]
gi|347836345|emb|CCD50917.1| similar to 40S ribosomal protein S3 [Botryotinia fuckeliana]
Length = 263
Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 76 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 135
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++ID A RHVL +Q
Sbjct: 136 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLKQG 185
>gi|343429784|emb|CBQ73356.1| probable 40S ribosomal protein S3 [Sporisorium reilianum SRZ2]
Length = 252
Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 75/107 (70%), Positives = 89/107 (83%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFKFP+NS+ELYAEKV NRGL A+AQ ESLR + L + + A YGVLRF+MESGAK
Sbjct: 74 VQKRFKFPDNSLELYAEKVQNRGLHAVAQCESLRYKLLGGLAVRRAAYGVLRFVMESGAK 133
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV++SGKLRA RA SMKF DG+MI SG PVK+++D AVRHVL +Q
Sbjct: 134 GCEVVISGKLRAARAKSMKFTDGFMIHSGQPVKDFVDEAVRHVLMKQ 180
>gi|412989948|emb|CCO20590.1| 40S ribosomal protein S3 [Bathycoccus prasinos]
Length = 233
Score = 160 bits (405), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 89/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F E +VELYAEKV NRGLCAI+Q ESLR + L + + ACYGVLRFIME+G
Sbjct: 76 SLVQKRFGFAEGAVELYAEKVANRGLCAISQCESLRYKLLGGLAVRRACYGVLRFIMENG 135
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKG EVIVSGKLR QRA +MKFKDGYMISSG PV+EYI S+ RHVL RQ
Sbjct: 136 AKGAEVIVSGKLRGQRAKAMKFKDGYMISSGNPVREYIVSSTRHVLLRQG 185
>gi|156051430|ref|XP_001591676.1| 40S ribosomal protein S3 [Sclerotinia sclerotiorum 1980 UF-70]
gi|154704900|gb|EDO04639.1| ribosomal protein S3 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 263
Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 76 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 135
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++ID A RHVL +Q
Sbjct: 136 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLKQG 185
>gi|443898722|dbj|GAC76056.1| phosphatidylserine decarboxylase [Pseudozyma antarctica T-34]
Length = 252
Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 75/108 (69%), Positives = 89/108 (82%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFKFP+NS+ELYAEKV NRGL A+AQ ESLR + L + + A YGVLRF+MESGAK
Sbjct: 74 VQKRFKFPDNSLELYAEKVQNRGLHAVAQCESLRYKLLGGLAVRRAAYGVLRFVMESGAK 133
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV++SGKLRA RA SMKF DG+MI SG PVK+++D AVRHVL +Q
Sbjct: 134 GCEVVISGKLRAARAKSMKFTDGFMIHSGQPVKDFVDEAVRHVLMKQG 181
>gi|354501651|ref|XP_003512903.1| PREDICTED: 40S ribosomal protein S3-like [Cricetulus griseus]
Length = 247
Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLC AQAESLR + L + + ACYGVLRFIMESG
Sbjct: 75 AVVQKRFGFPEGSVELYAEKVATRGLCGSAQAESLRYKLLGGLAVRRACYGVLRFIMESG 134
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 135 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 184
>gi|336370495|gb|EGN98835.1| hypothetical protein SERLA73DRAFT_181508 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383275|gb|EGO24424.1| hypothetical protein SERLADRAFT_467690 [Serpula lacrymans var.
lacrymans S7.9]
Length = 262
Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 77/107 (71%), Positives = 88/107 (82%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFKFPENS+ELYAEKV RGL AIAQ ESLR + L + + ACYGVLRF+MESGAK
Sbjct: 73 VQKRFKFPENSLELYAEKVQFRGLSAIAQCESLRYKLLGGLAVRRACYGVLRFVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV+VSGKLRA RA SMKF DG+MI SG P ++++D AVRHVL RQ
Sbjct: 133 GCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQ 179
>gi|209879906|ref|XP_002141393.1| 40S ribosomal protein S3 [Cryptosporidium muris RN66]
gi|209556999|gb|EEA07044.1| 40S ribosomal protein S3, putative [Cryptosporidium muris RN66]
Length = 221
Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 91/110 (82%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FP SVEL+AE++ NRGLCA+AQAESLR + L + + ACYGVLR +MESG
Sbjct: 72 SLVQKRFNFPAGSVELFAERIENRGLCAMAQAESLRYKLLKGVAVRRACYGVLRHVMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKF+DGYMI++G P ++Y+D AVR+VL +Q
Sbjct: 132 AKGCEVIVSGKLRAQRAKSMKFRDGYMIATGQPFRDYVDKAVRNVLMKQG 181
>gi|67614912|ref|XP_667397.1| ribosomal protein [Cryptosporidium hominis TU502]
gi|54658527|gb|EAL37164.1| ribosomal protein [Cryptosporidium hominis]
Length = 221
Score = 160 bits (405), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 73/110 (66%), Positives = 92/110 (83%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF FPE SVEL+AE++ NRGLCA+AQAESLR + L + + ACYGVLR +MESG
Sbjct: 72 SLIQKRFNFPEGSVELFAERIENRGLCAMAQAESLRYKLLKGVAVRRACYGVLRHVMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKF+DGYMI++G P ++++D AVR+V+ +Q
Sbjct: 132 AKGCEVIVSGKLRAQRAKSMKFRDGYMIATGQPFRDFVDKAVRNVMMKQG 181
>gi|260833516|ref|XP_002611703.1| hypothetical protein BRAFLDRAFT_56803 [Branchiostoma floridae]
gi|229297074|gb|EEN67713.1| hypothetical protein BRAFLDRAFT_56803 [Branchiostoma floridae]
Length = 226
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F E +VELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 SVVQKRFGFAEGTVELYAEKVAQRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P Y+DSAVRHV+ RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPANSYVDSAVRHVMLRQG 180
>gi|328862650|gb|EGG11751.1| hypothetical protein MELLADRAFT_70763 [Melampsora larici-populina
98AG31]
Length = 269
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPE SVELYAEKV RGLCA+AQ ESLR + L + + ACYGVLRFIMES
Sbjct: 70 SLVQKRFKFPEGSVELYAEKVQQRGLCAVAQCESLRYKLLGGLAVRRACYGVLRFIMESN 129
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P +++D AVRHVL RQ
Sbjct: 130 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPCVDFVDQAVRHVLLRQG 179
>gi|443732033|gb|ELU16925.1| hypothetical protein CAPTEDRAFT_171942 [Capitella teleta]
Length = 242
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F E +VELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 71 SVVQKRFNFQEGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P +Y+D AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGNPTNDYVDKAVRHVLLRQG 180
>gi|66362866|ref|XP_628399.1| 40S ribosomal protein S3, KH domain [Cryptosporidium parvum Iowa
II]
gi|46229434|gb|EAK90252.1| 40S ribosomal protein S3, KH domain [Cryptosporidium parvum Iowa
II]
gi|323508759|dbj|BAJ77273.1| cgd7_2250 [Cryptosporidium parvum]
Length = 221
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/110 (66%), Positives = 92/110 (83%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF FPE SVEL+AE++ NRGLCA+AQAESLR + L + + ACYGVLR +MESG
Sbjct: 72 SLIQKRFNFPEGSVELFAERIENRGLCAMAQAESLRYKLLKGVAVRRACYGVLRHVMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKF+DGYMI++G P ++++D AVR+V+ +Q
Sbjct: 132 AKGCEVIVSGKLRAQRAKSMKFRDGYMIATGQPFRDFVDKAVRNVMMKQG 181
>gi|354473311|ref|XP_003498879.1| PREDICTED: 40S ribosomal protein S3-like [Cricetulus griseus]
Length = 240
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV R LCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 68 AVVQKRFGFPEGSVELYAEKVATRRLCAIAQAESLRYKLLGGLAVRSACYGVLRFIMESG 127
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVR+VL RQA
Sbjct: 128 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRYVLLRQA 177
>gi|389751372|gb|EIM92445.1| ribosomal protein S3 [Stereum hirsutum FP-91666 SS1]
Length = 267
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/107 (71%), Positives = 88/107 (82%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFKFPENS+ELYAEKV RGL A+AQ ESLR + L + + ACYGVLRF+MESGAK
Sbjct: 73 VQKRFKFPENSLELYAEKVQYRGLSAVAQCESLRYKLLGGLAIRRACYGVLRFVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV+VSGKLRA RA SMKF DG+MI SG P ++++D AVRHVL RQ
Sbjct: 133 GCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQ 179
>gi|403173943|ref|XP_003332971.2| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170763|gb|EFP88552.2| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 265
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPE SVELYAEKV RGLCA+AQ ESLR + L + + ACYGVLRFIMES
Sbjct: 70 SLVQKRFKFPEGSVELYAEKVQQRGLCAVAQCESLRYKLLGGLAVRRACYGVLRFIMESN 129
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P +++D AVRHVL RQ
Sbjct: 130 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPSVDFVDQAVRHVLLRQG 179
>gi|346466617|gb|AEO33153.1| hypothetical protein [Amblyomma maculatum]
Length = 254
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPE +VELYAEKV +RGLCAIAQ ESLR + + + + ACYGVLRFIMESG
Sbjct: 83 SVVQKRFNFPEGTVELYAEKVASRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESG 142
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P +Y+++AVRHVL RQ
Sbjct: 143 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVETAVRHVLLRQG 192
>gi|403178905|ref|XP_003337266.2| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375164530|gb|EFP92847.2| small subunit ribosomal protein S3e [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 341
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPE SVELYAEKV RGLCA+AQ ESLR + L + + ACYGVLRFIMES
Sbjct: 146 SLVQKRFKFPEGSVELYAEKVQQRGLCAVAQCESLRYKLLGGLAVRRACYGVLRFIMESN 205
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P +++D AVRHVL RQ
Sbjct: 206 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPSVDFVDQAVRHVLLRQG 255
>gi|389625837|ref|XP_003710572.1| 40S ribosomal protein S3 [Magnaporthe oryzae 70-15]
gi|351650101|gb|EHA57960.1| 40S ribosomal protein S3 [Magnaporthe oryzae 70-15]
gi|440467710|gb|ELQ36909.1| 40S ribosomal protein S3 [Magnaporthe oryzae Y34]
gi|440480625|gb|ELQ61280.1| 40S ribosomal protein S3 [Magnaporthe oryzae P131]
Length = 262
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/109 (70%), Positives = 87/109 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFP +SV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 75 SLIQKRFKFPADSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 134
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++IDSA RHVL RQ
Sbjct: 135 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQ 183
>gi|442755587|gb|JAA69953.1| Putative 40s ribosomal protein s3 [Ixodes ricinus]
Length = 243
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPE +VELYAEKV +RGLCAIAQ ESLR + + + + ACYGVLRFIMESG
Sbjct: 71 SVVQKRFSFPEGTVELYAEKVASRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P +Y+++AVRHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVETAVRHVLLRQG 180
>gi|393232568|gb|EJD40148.1| 40S ribosomal protein S3 [Auricularia delicata TFB-10046 SS5]
Length = 264
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/108 (68%), Positives = 90/108 (83%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+QKRFKFPENS+ELYAEKV +RGL A+AQ ESLR + L + + ACYGVLRF+MESGAK
Sbjct: 73 IQKRFKFPENSLELYAEKVMHRGLSAVAQCESLRYKLLGGLAVRRACYGVLRFVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLRA RA SMKF DG+MI SG P ++++DSAVRHV+ +Q
Sbjct: 133 GCEVVVSGKLRAARAKSMKFTDGFMIHSGQPSRDFVDSAVRHVMLKQG 180
>gi|299755573|ref|XP_002912114.1| 40S ribosomal protein S3 [Coprinopsis cinerea okayama7#130]
gi|298411286|gb|EFI28620.1| 40S ribosomal protein S3 [Coprinopsis cinerea okayama7#130]
Length = 258
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/108 (72%), Positives = 87/108 (80%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFKFPENS+ELYAEKV RGL AIAQ ESLR + L + + ACYGVLRF+MESGAK
Sbjct: 73 VQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACYGVLRFVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLRA RA SMKF DG+MI SG P E++D AVRHVL RQ
Sbjct: 133 GCEVVVSGKLRAARAKSMKFTDGFMIHSGQPALEFVDYAVRHVLLRQG 180
>gi|392572589|gb|EIW65734.1| hypothetical protein TREMEDRAFT_41205 [Tremella mesenterica DSM
1558]
Length = 249
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S V KRFKFPENS+ELYAE+V RGL A+AQAESLR + L + + ACYGVLRF+MESG
Sbjct: 73 SLVMKRFKFPENSLELYAERVQYRGLSAVAQAESLRYKLLGGLAMRRACYGVLRFVMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG MI SG P K+Y+D AVRHVL RQ
Sbjct: 133 AKGCEVVVSGKLRAARAKSMKFVDGLMIHSGQPAKDYVDYAVRHVLLRQG 182
>gi|318087144|gb|ADV40164.1| ribosomal protein S3 [Latrodectus hesperus]
Length = 238
Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPE SVELYAEKV RGLCAIAQ ESLR + + + + ACYGVLRFIMESG
Sbjct: 72 SVVQKRFNFPEGSVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++AVRHVL RQ
Sbjct: 132 ARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGNPTNDYVETAVRHVLLRQG 181
>gi|449885323|gb|AGF29412.1| ribosomal protein S3 [Phaedon cochleariae]
Length = 240
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPENSV LY EKV NRGLCAIAQAESLR + + + + ACYGVLR+IME G
Sbjct: 71 SVVQKRFNFPENSVVLYGEKVANRGLCAIAQAESLRFKLIGGLAVRRACYGVLRYIMECG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P +Y+D+A RHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
>gi|288869512|ref|NP_001165863.1| ribosomal protein S3 [Tribolium castaneum]
gi|270006106|gb|EFA02554.1| hypothetical protein TcasGA2_TC008261 [Tribolium castaneum]
Length = 241
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPENSV LY EKV NRGLCAIAQAESLR + + + + ACYGVLR+IME G
Sbjct: 71 SVVQKRFNFPENSVVLYGEKVANRGLCAIAQAESLRFKLIGGLAVRRACYGVLRYIMECG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P +Y+D+A RHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
>gi|121511934|gb|ABM55418.1| 40S ribosomal protein S3 [Xenopsylla cheopis]
Length = 243
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF F +NSVELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFNFIDNSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P +Y+D+A RHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
>gi|163658467|gb|ABY28373.1| ribosomal protein S3 [Oncorhynchus masou formosanus]
Length = 245
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE +VELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
+KGCEV+VSGKLR QRA SMK DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 SKGCEVVVSGKLRGQRAKSMKSVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|19113555|ref|NP_596763.1| 40S ribosomal protein S3 [Schizosaccharomyces pombe 972h-]
gi|6094179|sp|O60128.1|RS3_SCHPO RecName: Full=40S ribosomal protein S3
gi|3133108|emb|CAA19033.1| 40S ribosomal protein S3 (predicted) [Schizosaccharomyces pombe]
gi|110082655|dbj|BAE97279.1| ribosomal protein s3 [Schizosaccharomyces pombe]
Length = 249
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/107 (70%), Positives = 88/107 (82%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFKF EN+VELYAEKV NRGLCA+AQ ESLR + LA + + A YGVLR++ME+GAK
Sbjct: 75 VQKRFKFAENTVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRRAAYGVLRYVMEAGAK 134
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV++SGKLRA RA SMKF DG+MI SG P ++IDSA RHVL RQ
Sbjct: 135 GCEVVISGKLRAARAKSMKFADGFMIHSGQPAVDFIDSATRHVLLRQ 181
>gi|332375642|gb|AEE62962.1| unknown [Dendroctonus ponderosae]
Length = 232
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPENS+ LY EKV NRGLCAIAQAESLR + + + + ACYGVLR+IME G
Sbjct: 71 SVVQKRFNFPENSIVLYGEKVANRGLCAIAQAESLRFKLIGGLAVRRACYGVLRYIMECG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P +Y+D+A RHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
>gi|321464706|gb|EFX75712.1| hypothetical protein DAPPUDRAFT_306633 [Daphnia pulex]
Length = 242
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F E +VELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 72 SVVQKRFGFQEGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P Y+D+AVRHVL RQ
Sbjct: 132 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNVYVDTAVRHVLLRQG 181
>gi|346319548|gb|EGX89149.1| cytoplasmic ribosomal protein subunit S3 [Cordyceps militaris CM01]
Length = 258
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMES
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESD 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P ++IDSA RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPKNDFIDSATRHVLLRQG 183
>gi|351707112|gb|EHB10031.1| 40S ribosomal protein S3 [Heterocephalus glaber]
Length = 127
Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/110 (72%), Positives = 85/110 (77%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + ACYGVL FIMESG
Sbjct: 7 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVLRACYGVLWFIMESG 66
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 67 AKGCEVFVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 116
>gi|156553282|ref|XP_001599651.1| PREDICTED: 40S ribosomal protein S3-like [Nasonia vitripennis]
Length = 242
Score = 158 bits (400), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F ++SVELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 72 SVVQKRFNFKDHSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 132 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVNTATRHVLLRQG 181
>gi|389608265|dbj|BAM17744.1| ribosomal protein S3 [Papilio xuthus]
Length = 244
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF PE SVELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 72 SVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 132 ARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 181
>gi|315115341|gb|ADT80643.1| ribosomal protein S3 [Euphydryas aurinia]
Length = 243
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF PE SVELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 72 SVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 132 ARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 181
>gi|357611706|gb|EHJ67618.1| 40S ribosomal protein S3 [Danaus plexippus]
Length = 245
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF PE+SVELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 72 SVVQKRFNIPEHSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 132 ARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 181
>gi|1350990|sp|P48153.1|RS3_MANSE RecName: Full=40S ribosomal protein S3
gi|527680|gb|AAB05575.1| ribosomal protein S3 [Manduca sexta]
Length = 243
Score = 158 bits (399), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF PE SVELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 72 SVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 132 ARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 181
>gi|112984112|ref|NP_001037253.1| ribosomal protein S3 [Bombyx mori]
gi|54609285|gb|AAV34858.1| ribosomal protein S3 [Bombyx mori]
Length = 243
Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF PE SVELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 72 SVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 132 ARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 181
>gi|338726172|ref|XP_003365268.1| PREDICTED: 40S ribosomal protein S3-like [Equus caballus]
Length = 243
Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRF MESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVAKRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFTMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AV HVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVCHVLLRQG 180
>gi|242218874|ref|XP_002475223.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
gi|220725609|gb|EED79589.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
Length = 262
Score = 157 bits (398), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/107 (71%), Positives = 87/107 (81%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFKFPENS+ELYAEKV RGL AIAQ ESLR + L + + ACYGVLRF+MESGAK
Sbjct: 73 VQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACYGVLRFVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV+VSGKLRA RA SMKF DG+MI SG P +++D AVRHV+ RQ
Sbjct: 133 GCEVVVSGKLRAARAKSMKFTDGFMIHSGQPALDFVDYAVRHVMLRQ 179
>gi|400595104|gb|EJP62914.1| cytoplasmic ribosomal protein subunit S3 [Beauveria bassiana ARSEF
2860]
Length = 257
Score = 157 bits (398), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMES
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESD 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P ++ID+A RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPKNDFIDTATRHVLLRQG 183
>gi|164598968|gb|ABX72228.2| ribosomal protein S3 [Ostrinia furnacalis]
Length = 166
Score = 157 bits (398), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF PE SVELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 24 SVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 83
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 84 ARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 133
>gi|62083397|gb|AAX62423.1| ribosomal protein S3 [Lysiphlebus testaceipes]
Length = 234
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F + +VELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 74 SVVQKRFGFKDGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P +Y+D+A RHVL RQ
Sbjct: 134 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTADYVDTATRHVLLRQG 183
>gi|156408429|ref|XP_001641859.1| predicted protein [Nematostella vectensis]
gi|156228999|gb|EDO49796.1| predicted protein [Nematostella vectensis]
Length = 240
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 85/110 (77%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPE SVELYAEKV RGLCAIAQ ESLR + + + + ACYGVLRFIMESG
Sbjct: 71 SVVQKRFGFPEGSVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG M+ +G P Y+D+AVRHV RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMVHAGEPTTHYVDTAVRHVYLRQG 180
>gi|16566719|gb|AAL26578.1|AF429976_1 ribosomal protein S3 [Spodoptera frugiperda]
Length = 243
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF PE SVELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 72 SVVQKRFNIPERSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 132 ARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 181
>gi|148684443|gb|EDL16390.1| ribosomal protein S3, isoform CRA_e [Mus musculus]
Length = 243
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 77/104 (74%), Positives = 84/104 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRH 104
AKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRH
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRH 174
>gi|389610621|dbj|BAM18922.1| ribosomal protein S3 [Papilio polytes]
Length = 244
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF PE SVELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 72 SVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 132 ARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 181
>gi|342356327|gb|AEL28822.1| ribosomal protein S3 [Heliconius melpomene cythera]
Length = 242
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF PE SVELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 72 SVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 132 ARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 181
>gi|116090821|gb|ABJ55992.1| ribosomal protein S3 [Ostrinia nubilalis]
Length = 241
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF PE SVELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 72 SVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 132 ARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 181
>gi|145345927|ref|XP_001417450.1| Ribosomal protein S3, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
gi|144577677|gb|ABO95743.1| Ribosomal protein S3, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
Length = 231
Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/111 (68%), Positives = 89/111 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQ+RF+ E SVELYAE+VNNRGLCAIAQ ESLR + L + + ACYGVLR+IME+G
Sbjct: 72 TLVQRRFQMAEGSVELYAERVNNRGLCAIAQCESLRYKLLGGLAVRRACYGVLRYIMEAG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQAS 111
AKG EV+VSGKLR QRA +MKFKDGYMISSG PV+EYI S RH L RQ +
Sbjct: 132 AKGAEVVVSGKLRGQRAKAMKFKDGYMISSGNPVREYIVSCTRHALLRQGT 182
>gi|332220518|ref|XP_003259402.1| PREDICTED: 40S ribosomal protein S3-like isoform 2 [Nomascus
leucogenys]
gi|441635552|ref|XP_003259404.2| PREDICTED: 40S ribosomal protein S3-like isoform 4 [Nomascus
leucogenys]
gi|441635555|ref|XP_004089921.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635558|ref|XP_004089922.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635561|ref|XP_004089923.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635564|ref|XP_004089924.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635567|ref|XP_004089925.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635570|ref|XP_004089926.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635573|ref|XP_004089927.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
Length = 243
Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE VELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFI+ESG
Sbjct: 71 AVVQKRFGFPEGIVELYAEKVATRGLCAIAQAESLRYKLVGGLAVRRACYGVLRFIIESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGC+V+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AKGCKVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|390988241|gb|AFM36762.1| ribosomal protein S3, partial [Agrotis ipsilon]
Length = 192
Score = 157 bits (397), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF PE SVELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 21 SVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 80
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 81 ARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 130
>gi|384497979|gb|EIE88470.1| 40S ribosomal protein S3 [Rhizopus delemar RA 99-880]
Length = 241
Score = 157 bits (396), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 73/109 (66%), Positives = 90/109 (82%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRFKFPEN+VELYAE+V NRGLCAIAQ ES++ + L + + ACYGV+RF+MESG
Sbjct: 74 TLVQKRFKFPENAVELYAERVQNRGLCAIAQCESVKFKLLNGLAVRRACYGVIRFVMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEV+VSGK+RA RA +MKF DG+MI SG P +E+I +AVRHV RQ
Sbjct: 134 AKGCEVVVSGKVRAARAKAMKFADGFMIHSGNPAREFITTAVRHVDLRQ 182
>gi|403415257|emb|CCM01957.1| predicted protein [Fibroporia radiculosa]
Length = 260
Score = 157 bits (396), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 75/108 (69%), Positives = 87/108 (80%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFKFPENS+ELYAEKV +RGL AIAQ ESLR + L + + ACYGVLRF+MES AK
Sbjct: 73 VQKRFKFPENSLELYAEKVQSRGLSAIAQCESLRYKLLGGLAVRRACYGVLRFVMESNAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLRA RA SMKF DG+MI SG P +++D AVRHV+ RQ
Sbjct: 133 GCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAVDFVDYAVRHVMLRQG 180
>gi|384483178|gb|EIE75358.1| 40S ribosomal protein S3 [Rhizopus delemar RA 99-880]
Length = 231
Score = 157 bits (396), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 73/109 (66%), Positives = 90/109 (82%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRFKFPEN+VELYAE+V NRGLCAIAQ ES++ + L + + ACYGV+RF+MESG
Sbjct: 63 TLVQKRFKFPENAVELYAERVQNRGLCAIAQCESVKFKLLNGLAVRRACYGVIRFVMESG 122
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEV+VSGK+RA RA +MKF DG+MI SG P +E+I +AVRHV RQ
Sbjct: 123 AKGCEVVVSGKVRAARAKAMKFADGFMIHSGNPAREFITTAVRHVDLRQ 171
>gi|312380148|gb|EFR26232.1| hypothetical protein AND_07881 [Anopheles darlingi]
Length = 278
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 85/110 (77%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F SVELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 106 SVVQKRFGFAPGSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 165
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P EY+D+A RHVL RQ
Sbjct: 166 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQG 215
>gi|264667327|gb|ACY71249.1| ribosomal protein S3 [Chrysomela tremula]
Length = 240
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 85/110 (77%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPE SV LY EKV NRGLCAIAQAESLR + + + + ACYGVLR+IME G
Sbjct: 71 SVVQKRFNFPEGSVVLYGEKVANRGLCAIAQAESLRFKLIGGLAVRRACYGVLRYIMECG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P +Y+D+A RHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
>gi|390604317|gb|EIN13708.1| ribosomal protein S3 [Punctularia strigosozonata HHB-11173 SS5]
Length = 265
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/108 (69%), Positives = 87/108 (80%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFKFPENSVELYAEKV RGL AIAQ ESLR + L + + A YGVLRF+MESGAK
Sbjct: 73 VQKRFKFPENSVELYAEKVTYRGLSAIAQCESLRYKLLGGLAVRRAAYGVLRFVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV++SGKLRA RA SMKF DG+MI SG P ++++D AVRHVL +Q
Sbjct: 133 GCEVVISGKLRAARAKSMKFTDGFMIHSGQPSRDFVDYAVRHVLLKQG 180
>gi|392571524|gb|EIW64696.1| 40S ribosomal protein S3 [Trametes versicolor FP-101664 SS1]
Length = 261
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/108 (69%), Positives = 87/108 (80%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFKFP+NS+ELYAEKV RGL AIAQ ESLR + L + + ACYGVLRF+MESGAK
Sbjct: 73 VQKRFKFPDNSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACYGVLRFVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLRA RA SMKF DG+MI SG P +++D AVRHV+ RQ
Sbjct: 133 GCEVVVSGKLRAARAKSMKFTDGFMIHSGQPALDFVDYAVRHVMLRQG 180
>gi|326436207|gb|EGD81777.1| 40S ribosomal protein S3 [Salpingoeca sp. ATCC 50818]
Length = 234
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/108 (69%), Positives = 90/108 (83%), Gaps = 1/108 (0%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
V+KRF F +N VEL+AEKV NRGLCA+AQ ESLR + L + + ACYGVLR +MESGAK
Sbjct: 74 VKKRFGFKDN-VELFAEKVANRGLCAMAQCESLRYKLLGGLAVRRACYGVLRLVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEVI+SGKLRAQRA SMKF DG+MIS+G+P ++YID+AVRHVL RQ
Sbjct: 133 GCEVIISGKLRAQRAKSMKFNDGFMISAGHPTRDYIDTAVRHVLLRQG 180
>gi|110456370|gb|ABG74703.1| putative ribosomal protein S3 [Diaphorina citri]
Length = 220
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKF + ++ELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 50 SVVQKRFKFADGAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 109
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 110 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 159
>gi|187233664|gb|ACD01096.1| ribosomal protein S1a [Adineta vaga]
Length = 215
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/110 (67%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF +PENS+EL+A+KV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 73 SVIQKRFGYPENSIELFAQKVVTRGLCAIAQAESLRYKLMGGLPVRRACYGVLRFIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+GCE+IVSGKLR QRA +MKF DG MI SG PV +Y+ AVRHVL RQ
Sbjct: 133 AQGCEIIVSGKLRGQRAKAMKFIDGLMIHSGDPVNDYVQYAVRHVLLRQG 182
>gi|58258267|ref|XP_566546.1| ribosomal protein S3 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134106179|ref|XP_778100.1| 40S ribosomal protein S3 [Cryptococcus neoformans var. neoformans
B-3501A]
gi|321251025|ref|XP_003191933.1| ribosomal protein S3 [Cryptococcus gattii WM276]
gi|50260803|gb|EAL23453.1| hypothetical protein CNBA1030 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222683|gb|AAW40727.1| ribosomal protein S3, putative [Cryptococcus neoformans var.
neoformans JEC21]
gi|317458401|gb|ADV20146.1| Ribosomal protein S3, putative [Cryptococcus gattii WM276]
gi|405117477|gb|AFR92252.1| ribosomal protein S3 [Cryptococcus neoformans var. grubii H99]
Length = 252
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/107 (68%), Positives = 88/107 (82%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
++KRFKFPEN++ELYAEKV RGL A AQAESLR + L + + ACYGVLRF+MESGAK
Sbjct: 75 IEKRFKFPENALELYAEKVQYRGLSATAQAESLRYKLLGGLAMRRACYGVLRFVMESGAK 134
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV+VSGKLRA RA SMKF +G+M+ SG P +++ID AVRHVL RQ
Sbjct: 135 GCEVVVSGKLRAARAKSMKFTEGFMVHSGQPARDFIDYAVRHVLLRQ 181
>gi|323450925|gb|EGB06804.1| hypothetical protein AURANDRAFT_60177 [Aureococcus anophagefferens]
Length = 231
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/110 (67%), Positives = 89/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F + +VELYAE+V NRGLCA AQAESL+ + L + + ACYGV+RF+MESG
Sbjct: 70 SVVQKRFHFQDGAVELYAERVANRGLCAQAQAESLKYKLLGGLAVRRACYGVVRFVMESG 129
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKG EV+VSGKLRAQRA +MKF DGYMI +G+ +EY+DSAVRHVL RQ
Sbjct: 130 AKGVEVVVSGKLRAQRAKAMKFTDGYMIKTGHSKREYVDSAVRHVLMRQG 179
>gi|50284382|emb|CAH04122.1| ribsomal protein S3e [Papilio dardanus]
Length = 220
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 85/110 (77%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF PE SVELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 72 SVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+GCE +VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 132 ARGCEAVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQG 181
>gi|393218435|gb|EJD03923.1| ribosomal protein S3 [Fomitiporia mediterranea MF3/22]
Length = 264
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/108 (67%), Positives = 87/108 (80%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFKFPENS+ELYAEKV RGL A+AQ ESLR + L + + ACYGVLRF+MESGAK
Sbjct: 73 VQKRFKFPENSLELYAEKVQYRGLSAVAQCESLRYKLLGGLAVRRACYGVLRFVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLRA RA SMKF DG+M+ SG P ++++D A RHVL +Q
Sbjct: 133 GCEVVVSGKLRAARAKSMKFTDGFMVHSGQPARDFVDYAYRHVLLKQG 180
>gi|290349642|dbj|BAI77929.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|290349644|dbj|BAI77930.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 165
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 85/110 (77%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF F +VELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 38 AVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 97
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P EY+D+A RHVL RQ
Sbjct: 98 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQG 147
>gi|170057463|ref|XP_001864493.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
gi|167876891|gb|EDS40274.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
Length = 250
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 85/110 (77%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF F +VELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P EY+D+A RHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQG 180
>gi|401881615|gb|EJT45911.1| ribosomal protein S3 [Trichosporon asahii var. asahii CBS 2479]
gi|406702723|gb|EKD05674.1| ribosomal protein S3 [Trichosporon asahii var. asahii CBS 8904]
Length = 248
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/108 (68%), Positives = 88/108 (81%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
V+KRF+FPENS+ELYAEKV RGL A+AQAESLR + L + + ACYGVLR++MESGAK
Sbjct: 75 VEKRFRFPENSLELYAEKVQYRGLSAVAQAESLRYKLLGGLAMRRACYGVLRYVMESGAK 134
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLRA RA SMKF DG++I SG P ++ID AVRHVL RQ
Sbjct: 135 GCEVVVSGKLRAARAKSMKFSDGFLIHSGQPSVDFIDYAVRHVLLRQG 182
>gi|213410238|ref|XP_002175889.1| 40S ribosomal protein S3 [Schizosaccharomyces japonicus yFS275]
gi|212003936|gb|EEB09596.1| 40S ribosomal protein S3 [Schizosaccharomyces japonicus yFS275]
Length = 251
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/107 (69%), Positives = 87/107 (81%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFKF EN+VELYAEKV NRGLCA+AQ ESLR + LA + + A YGVLR++ME+GAK
Sbjct: 74 VQKRFKFAENTVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRRAAYGVLRYVMEAGAK 133
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV++SGKLRA RA SMKF DG+MI SG P ++ID A RHVL RQ
Sbjct: 134 GCEVVISGKLRAARAKSMKFADGFMIHSGQPAVDFIDCATRHVLLRQ 180
>gi|449017871|dbj|BAM81273.1| 40S ribosomal protein S3 [Cyanidioschyzon merolae strain 10D]
Length = 262
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/108 (67%), Positives = 86/108 (79%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
V+KRF FPEN V L+ E+V NRGLCA+AQAESLR + L + + A YGVLRF+MESGAK
Sbjct: 76 VEKRFGFPENQVSLFVERVPNRGLCAMAQAESLRYKLLGGLAVRRAAYGVLRFVMESGAK 135
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV +SGKLRAQRA +MKF DGYMIS+G P ++ID AVRHVL RQ
Sbjct: 136 GCEVQISGKLRAQRAKTMKFMDGYMISTGQPKLDFIDRAVRHVLLRQG 183
>gi|70906311|gb|AAZ14891.1| ribosomal protein S3 [Aedes albopictus]
Length = 243
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 85/110 (77%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF F +VELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P EY+D+A RHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQG 180
>gi|157118131|ref|XP_001659023.1| 40S ribosomal protein S3 [Aedes aegypti]
gi|403182936|gb|EJY57732.1| AAEL008192-PB [Aedes aegypti]
Length = 256
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 85/110 (77%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF F +VELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 84 AVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 143
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P EY+D+A RHVL RQ
Sbjct: 144 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQG 193
>gi|157118129|ref|XP_001659022.1| 40S ribosomal protein S3 [Aedes aegypti]
gi|70906313|gb|AAZ14892.1| ribosomal protein S3 [Aedes aegypti]
gi|108875827|gb|EAT40052.1| AAEL008192-PA [Aedes aegypti]
Length = 243
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 85/110 (77%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF F +VELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P EY+D+A RHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQG 180
>gi|78190807|gb|ABB29725.1| ribosomal protein 3 small subunit [Monosiga brevicollis]
Length = 190
Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/108 (67%), Positives = 88/108 (81%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+QKRF F ++ VEL+AEKV NRGLCA+AQ E+LR + + + ACYGV+RF+MESGAK
Sbjct: 46 IQKRFGFQKDEVELFAEKVANRGLCAVAQCENLRYKLTGGLAVRRACYGVVRFVMESGAK 105
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEVIVSGKLRAQRA +MKF DG+MISSG P +EYID+AVRHV RQ
Sbjct: 106 GCEVIVSGKLRAQRAKAMKFGDGFMISSGNPTREYIDTAVRHVPMRQG 153
>gi|196012547|ref|XP_002116136.1| ribosomal protein S3e [Trichoplax adhaerens]
gi|190581459|gb|EDV21536.1| ribosomal protein S3e [Trichoplax adhaerens]
Length = 228
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/110 (66%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF FPE+SVE+YAEKV RGLCAIAQ ESLR + + + + ACYGVLRFIMESG
Sbjct: 72 SLIQKRFNFPEDSVEIYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCE++VSGKLR QRA SMKF DG MI +G P +Y+D+A+RHV RQ
Sbjct: 132 AKGCEIVVSGKLRGQRAKSMKFVDGLMIHTGQPCVDYVDTAIRHVYLRQG 181
>gi|167519583|ref|XP_001744131.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777217|gb|EDQ90834.1| predicted protein [Monosiga brevicollis MX1]
Length = 252
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 73/108 (67%), Positives = 88/108 (81%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+QKRF F ++ VEL+AEKV NRGLCA+AQ E+LR + + + ACYGV+RF+MESGAK
Sbjct: 74 IQKRFGFQKDEVELFAEKVANRGLCAVAQCENLRYKLTGGLAVRRACYGVVRFVMESGAK 133
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEVIVSGKLRAQRA +MKF DG+MISSG P +EYID+AVRHV RQ
Sbjct: 134 GCEVIVSGKLRAQRAKAMKFGDGFMISSGNPTREYIDTAVRHVPMRQG 181
>gi|386869503|ref|NP_001247435.1| 40S ribosomal protein S3 isoform 2 [Homo sapiens]
gi|397487321|ref|XP_003814751.1| PREDICTED: 40S ribosomal protein S3 isoform 3 [Pan paniscus]
Length = 259
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/126 (64%), Positives = 88/126 (69%), Gaps = 16/126 (12%)
Query: 1 SAVQKRFKFPENSVEL----------------YAEKVNNRGLCAIAQAESLRKEGLAVIV 44
+ VQKRF FPE SVEL YAEKV RGLCAIAQAESLR + L +
Sbjct: 71 AVVQKRFGFPEGSVELKIMVMVTGYPLLPLKLYAEKVATRGLCAIAQAESLRYKLLGGLA 130
Query: 45 CKMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRH 104
+ ACYGVLRFIMESGAKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRH
Sbjct: 131 VRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRH 190
Query: 105 VLXRQA 110
VL RQ
Sbjct: 191 VLLRQG 196
>gi|84996723|ref|XP_953083.1| 40S ribosomal protein S3 [Theileria annulata strain Ankara]
gi|65304079|emb|CAI76458.1| 40S ribosomal protein S3, putative [Theileria annulata]
Length = 216
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 89/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F +SVELYAE+V NRGLCA+AQAESLR + L + + A YGVLR IMESG
Sbjct: 72 SLVQKRFGFSSDSVELYAERVENRGLCAMAQAESLRYKLLKGLAIRRAAYGVLRQIMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGY+IS+G P +EY+++AVR V RQ
Sbjct: 132 AKGCEVIVSGKLRAQRAKSMKFKDGYIISTGQPAQEYVNTAVRSVQLRQG 181
>gi|71028826|ref|XP_764056.1| 40S ribosomal protein S3 [Theileria parva strain Muguga]
gi|68351010|gb|EAN31773.1| 40S ribosomal protein S3, putative [Theileria parva]
Length = 216
Score = 154 bits (390), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 89/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F +SVELYAE+V NRGLCA+AQAESLR + L + + A YGVLR IMESG
Sbjct: 73 SLVQKRFGFSSDSVELYAERVENRGLCAMAQAESLRYKLLKGLAIRRAAYGVLRQIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGY+IS+G P +EY+++AVR V RQ
Sbjct: 133 AKGCEVIVSGKLRAQRAKSMKFKDGYIISTGQPAQEYVNTAVRSVQLRQG 182
>gi|359492651|ref|XP_003634450.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3-1-like
[Vitis vinifera]
Length = 246
Score = 154 bits (390), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/106 (77%), Positives = 87/106 (82%), Gaps = 5/106 (4%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF+F ENSVEL AEKVNNRG AIAQAESLR + L CYGVLRF+MESG
Sbjct: 71 SVVQKRFEFLENSVELCAEKVNNRGFYAIAQAESLRYKLLG-----GXCYGVLRFVMESG 125
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVL 106
AKGCEVIVSGKL AQRA SMKFKDGY+ISSG PVK+YID AVRHVL
Sbjct: 126 AKGCEVIVSGKLCAQRAKSMKFKDGYLISSGQPVKDYIDLAVRHVL 171
>gi|291389681|ref|XP_002711316.1| PREDICTED: ribosomal protein S3-like [Oryctolagus cuniculus]
Length = 286
Score = 154 bits (390), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/108 (72%), Positives = 84/108 (77%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQ RF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESGAK
Sbjct: 116 VQTRFGFPEGSVELYAEKVAMRGLCAIAQAESLRYQLLGGLAVRRACYGVLRFIMESGAK 175
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLR QRA SMKF G +I SG PV Y D+AVRHVL RQ
Sbjct: 176 GCEVVVSGKLRGQRAQSMKFVGGLVIHSGDPVNYYSDTAVRHVLLRQG 223
>gi|403223989|dbj|BAM42119.1| 40S ribosomal protein S3 [Theileria orientalis strain Shintoku]
Length = 216
Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 89/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F +SVELYAE+V NRGLCA+AQAESLR + L + + A YGVLR IMESG
Sbjct: 73 SLVQKRFGFSSDSVELYAERVENRGLCAMAQAESLRYKLLKGLAVRRAAYGVLRHIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGY+IS+G P ++Y+++AVR V RQ
Sbjct: 133 AKGCEVIVSGKLRAQRAKSMKFKDGYIISTGQPAQQYVNTAVRSVQLRQG 182
>gi|402244315|emb|CBW52775.1| 40S ribosomal protein S3 [Polytomella sp. Pringsheim 198.80]
Length = 225
Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 91/110 (82%), Gaps = 2/110 (1%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFK ++V+L+AE+V+ RGLCAIAQAESLR + L + + ACYGVLR++MESG
Sbjct: 82 SVIQKRFKI--DNVQLFAEEVSARGLCAIAQAESLRYKLLGGLAVRRACYGVLRYVMESG 139
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVI+SGKLRAQRA SMKFKDGYM+SSG + YIDSAVRHVL RQ
Sbjct: 140 AKGCEVIISGKLRAQRAKSMKFKDGYMVSSGNSSRTYIDSAVRHVLLRQG 189
>gi|332016343|gb|EGI57256.1| 40S ribosomal protein S3 [Acromyrmex echinatior]
Length = 242
Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/112 (69%), Positives = 87/112 (77%), Gaps = 3/112 (2%)
Query: 1 SAVQKRFKF--PENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIME 58
S VQKRF F P+N VELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIME
Sbjct: 72 SVVQKRFNFKEPQN-VELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME 130
Query: 59 SGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
SGAKGCEV+VSGKLR QRA SMKF DG MI SG P EY+++A RHVL RQ
Sbjct: 131 SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQG 182
>gi|332024589|gb|EGI64787.1| 40S ribosomal protein S3 [Acromyrmex echinatior]
Length = 242
Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/112 (69%), Positives = 87/112 (77%), Gaps = 3/112 (2%)
Query: 1 SAVQKRFKF--PENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIME 58
S VQKRF F P+N VELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIME
Sbjct: 72 SVVQKRFNFKEPQN-VELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME 130
Query: 59 SGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
SGAKGCEV+VSGKLR QRA SMKF DG MI SG P EY+++A RHVL RQ
Sbjct: 131 SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQG 182
>gi|325183864|emb|CCA18322.1| 40S ribosomal protein S33 putative [Albugo laibachii Nc14]
gi|325183947|emb|CCA18405.1| 40S ribosomal protein S33 putative [Albugo laibachii Nc14]
Length = 246
Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/110 (67%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F E SVELYAE++ NRGLC+ AQAESL+ L + + ACY VLRF+ME+G
Sbjct: 71 SVVQKRFNFAEGSVELYAERIANRGLCSQAQAESLKYRLLEGLAVRRACYSVLRFVMEAG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFK+GYM+ +G +EY+D+AVRHVL RQ
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKEGYMVKTGNARQEYVDTAVRHVLMRQG 180
>gi|307167583|gb|EFN61127.1| 40S ribosomal protein S3 [Camponotus floridanus]
Length = 242
Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 78/112 (69%), Positives = 87/112 (77%), Gaps = 3/112 (2%)
Query: 1 SAVQKRFKF--PENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIME 58
S VQKRF F P+N VELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIME
Sbjct: 72 SVVQKRFNFKEPQN-VELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME 130
Query: 59 SGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
SGAKGCEV+VSGKLR QRA SMKF DG MI SG P EY+++A RHVL RQ
Sbjct: 131 SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQG 182
>gi|340379265|ref|XP_003388147.1| PREDICTED: 40S ribosomal protein S3-like [Amphimedon queenslandica]
Length = 236
Score = 154 bits (389), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 84/110 (76%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE +VELYAEKV RGLCAIAQ ESLR + + + + ACYGVLRFIMESG
Sbjct: 70 AVVQKRFSFPEGTVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESG 129
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGC VIVSGKLR QRA SMKF DG MI +G P + YID+AV HV RQ
Sbjct: 130 AKGCTVIVSGKLRGQRAKSMKFTDGLMIHAGNPTRHYIDNAVTHVHLRQG 179
>gi|340384078|ref|XP_003390542.1| PREDICTED: 40S ribosomal protein S3-like [Amphimedon queenslandica]
Length = 236
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 84/110 (76%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE +VELYAEKV RGLCAIAQ ESLR + + + + ACYGVLRFIMESG
Sbjct: 70 AVVQKRFSFPEGTVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESG 129
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGC VIVSGKLR QRA SMKF DG MI +G P + YID+AV HV RQ
Sbjct: 130 AKGCTVIVSGKLRGQRAKSMKFTDGLMIHAGNPTRHYIDNAVTHVHLRQG 179
>gi|263173249|gb|ACY69890.1| S3e ribosomal protein [Cimex lectularius]
Length = 221
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 73/110 (66%), Positives = 85/110 (77%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF+F E ++LY EKV RGLCAIAQAESLR + + + + ACYGVLRFIME+G
Sbjct: 57 SVIQKRFQFAEGKLDLYTEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMENG 116
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCE++VSGKLR QRA SMKF DG MI SG P EY+DSA RHVL RQ
Sbjct: 117 AKGCEIVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDSATRHVLLRQG 166
>gi|401408051|ref|XP_003883474.1| SSU ribosomal protein S3P, related [Neospora caninum Liverpool]
gi|325117891|emb|CBZ53442.1| SSU ribosomal protein S3P, related [Neospora caninum Liverpool]
Length = 235
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F +SVEL+AE+V NRGLCA+AQAESLR + L + + ACYGVLR IMESG
Sbjct: 73 SVVQKRFGFAPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRAQRA SMKFKDGY+IS+G P K ++D A+R V RQ
Sbjct: 133 AKGCEVVVSGKLRAQRAKSMKFKDGYLISTGEPSKMFVDQAIRSVQLRQG 182
>gi|118793920|ref|XP_321155.3| AGAP001910-PA [Anopheles gambiae str. PEST]
gi|116116043|gb|EAA01737.4| AGAP001910-PA [Anopheles gambiae str. PEST]
Length = 244
Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 85/110 (77%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ V+KRF F SVELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 71 AVVRKRFGFAPGSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P EY+D+A RHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQG 180
>gi|383851993|ref|XP_003701515.1| PREDICTED: 40S ribosomal protein S3-like [Megachile rotundata]
Length = 242
Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 76/111 (68%), Positives = 86/111 (77%), Gaps = 1/111 (0%)
Query: 1 SAVQKRFKFPEN-SVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMES 59
S VQKRF F E ++ELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMES
Sbjct: 72 SVVQKRFNFKETQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVLRFIMES 131
Query: 60 GAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GAKGCEV+VSGKLR QRA SMKF DG MI SG P EY+++A RHVL RQ
Sbjct: 132 GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQG 182
>gi|324513448|gb|ADY45526.1| 40S ribosomal protein S3 [Ascaris suum]
Length = 249
Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 85/110 (77%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F E SVELYAEKV+NRGLCA+AQ ESLR + + + + ACYGVLRFIMES
Sbjct: 73 SVVQKRFGFAEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESS 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+GCEVIVSGKLR QRA SMKF DG MI SG PV +YI AVRHV RQ
Sbjct: 133 AQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQG 182
>gi|66504343|ref|XP_623731.1| PREDICTED: 40S ribosomal protein S3 [Apis mellifera]
gi|380026164|ref|XP_003696828.1| PREDICTED: 40S ribosomal protein S3-like [Apis florea]
Length = 242
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/111 (68%), Positives = 86/111 (77%), Gaps = 1/111 (0%)
Query: 1 SAVQKRFKFPEN-SVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMES 59
S VQKRF F E ++ELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMES
Sbjct: 72 SVVQKRFNFKETQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVLRFIMES 131
Query: 60 GAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GAKGCEV+VSGKLR QRA SMKF DG MI SG P EY+++A RHVL RQ
Sbjct: 132 GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQG 182
>gi|237837605|ref|XP_002368100.1| 40S ribosomal protein S3, putative [Toxoplasma gondii ME49]
gi|211965764|gb|EEB00960.1| 40S ribosomal protein S3, putative [Toxoplasma gondii ME49]
gi|221509134|gb|EEE34703.1| 40S ribosomal protein S3, putative [Toxoplasma gondii VEG]
Length = 235
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F +SVEL+AE+V NRGLCA+AQAESLR + L + + ACYGVLR IMESG
Sbjct: 73 SVVQKRFGFAPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRAQRA SMKFKDGY+IS+G P K ++D A+R V RQ
Sbjct: 133 AKGCEVVVSGKLRAQRAKSMKFKDGYLISTGEPSKMFVDQAIRSVQLRQG 182
>gi|341895059|gb|EGT50994.1| CBN-RPS-3 protein [Caenorhabditis brenneri]
Length = 246
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F E SVELYAEKV+NRGLCA+AQ ESLR + + + + ACYGVLRFIMESG
Sbjct: 73 SVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+G EVIVSGKLR QRA +MKF DG MI SG+PV +YI AVRHV RQ
Sbjct: 133 AQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQG 182
>gi|322783274|gb|EFZ10858.1| hypothetical protein SINV_09070 [Solenopsis invicta]
Length = 257
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/112 (69%), Positives = 87/112 (77%), Gaps = 3/112 (2%)
Query: 1 SAVQKRFKF--PENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIME 58
S VQKRF F P+N VELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIME
Sbjct: 87 SVVQKRFNFKEPQN-VELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME 145
Query: 59 SGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
SGAKGCEV+VSGKLR QRA SMKF DG MI SG P EY+++A RHVL RQ
Sbjct: 146 SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQG 197
>gi|452988654|gb|EME88409.1| hypothetical protein MYCFIDRAFT_70441 [Pseudocercospora fijiensis
CIRAD86]
Length = 273
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/110 (67%), Positives = 85/110 (77%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S + RFKFP +SV LYA KV +RGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 81 SLITHRFKFPPDSVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 140
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++IDSA RHVL RQ
Sbjct: 141 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQG 190
>gi|268569106|ref|XP_002648176.1| C. briggsae CBR-RPS-3 protein [Caenorhabditis briggsae]
Length = 247
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F E SVELYAEKV+NRGLCA+AQ ESLR + + + + ACYGVLRFIMESG
Sbjct: 73 SVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+G EVIVSGKLR QRA +MKF DG MI SG+PV +YI AVRHV RQ
Sbjct: 133 AQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQG 182
>gi|326521618|dbj|BAK00385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 270
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/110 (65%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF +PENS+EL+A+KV +RGLCAIAQAESLR + + + ACYGVLRFIM+SG
Sbjct: 73 SVIQKRFGYPENSIELFAQKVVSRGLCAIAQAESLRYKLMGGFPVRRACYGVLRFIMDSG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+GCE++VSGKLR QRA +MKF DG MI SG PV +Y+ AVRHVL RQ
Sbjct: 133 AQGCEIVVSGKLRGQRAKAMKFIDGLMIHSGDPVNDYVQFAVRHVLLRQG 182
>gi|340710439|ref|XP_003393797.1| PREDICTED: 40S ribosomal protein S3-like [Bombus terrestris]
Length = 242
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/111 (68%), Positives = 86/111 (77%), Gaps = 1/111 (0%)
Query: 1 SAVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMES 59
S VQKRF F E ++ELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMES
Sbjct: 72 SVVQKRFNFKEAQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVLRFIMES 131
Query: 60 GAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GAKGCEV+VSGKLR QRA SMKF DG MI SG P EY+++A RHVL RQ
Sbjct: 132 GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQG 182
>gi|340710430|ref|XP_003393793.1| PREDICTED: 40S ribosomal protein S3-like [Bombus terrestris]
Length = 242
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/111 (68%), Positives = 86/111 (77%), Gaps = 1/111 (0%)
Query: 1 SAVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMES 59
S VQKRF F E ++ELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMES
Sbjct: 72 SVVQKRFNFKEAQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVLRFIMES 131
Query: 60 GAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GAKGCEV+VSGKLR QRA SMKF DG MI SG P EY+++A RHVL RQ
Sbjct: 132 GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQG 182
>gi|17554770|ref|NP_498349.1| Protein RPS-3 [Caenorhabditis elegans]
gi|1350989|sp|P48152.1|RS3_CAEEL RecName: Full=40S ribosomal protein S3
gi|351050702|emb|CCD65297.1| Protein RPS-3 [Caenorhabditis elegans]
Length = 247
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F E SVELYAEKV+NRGLCA+AQ ESLR + + + + ACYGVLRFIMESG
Sbjct: 73 SVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+G EVIVSGKLR QRA +MKF DG MI SG+PV +YI AVRHV RQ
Sbjct: 133 AQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQG 182
>gi|350427313|ref|XP_003494719.1| PREDICTED: 40S ribosomal protein S3-like [Bombus impatiens]
Length = 242
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/111 (68%), Positives = 86/111 (77%), Gaps = 1/111 (0%)
Query: 1 SAVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMES 59
S VQKRF F E ++ELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMES
Sbjct: 72 SVVQKRFNFKEAQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVLRFIMES 131
Query: 60 GAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GAKGCEV+VSGKLR QRA SMKF DG MI SG P EY+++A RHVL RQ
Sbjct: 132 GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQG 182
>gi|422293192|gb|EKU20492.1| small subunit ribosomal protein S3e [Nannochloropsis gaditana
CCMP526]
Length = 243
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/110 (67%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ +QKRF FP+ VEL+AEKV +RGLCA AQAESL+ + L + + ACYGVLRF+ME G
Sbjct: 71 TVIQKRFNFPDGVVELFAEKVASRGLCAQAQAESLKYKLLGGLAVRRACYGVLRFVMEQG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKG EVIVSGKLRAQRA SMKF+DGYMI SG +EY+D AVRHVL RQ
Sbjct: 131 AKGAEVIVSGKLRAQRAKSMKFQDGYMIKSGQAKREYVDYAVRHVLMRQG 180
>gi|189308068|gb|ACD86918.1| ribosomal protein S3 [Caenorhabditis brenneri]
Length = 205
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F E SVELYAEKV+NRGLCA+AQ ESLR + + + + ACYGVLRFIMESG
Sbjct: 73 SVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+G EVIVSGKLR QRA +MKF DG MI SG+PV +YI AVRHV RQ
Sbjct: 133 AQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQG 182
>gi|298714483|emb|CBJ27505.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 222
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/110 (66%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FP+++VELYAE+V RGLCA QAESL+ + L + + ACYGVLRFIMESG
Sbjct: 67 SVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESG 126
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKG EVIV+GKLRAQRA +MKF+DGYMI SG ++Y+D AVRHV+ RQ
Sbjct: 127 AKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQG 176
>gi|221488638|gb|EEE26852.1| 40S ribosomal protein S3, putative [Toxoplasma gondii GT1]
Length = 255
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F +SVEL+AE+V NRGLCA+AQAESLR + L + + ACYGVLR IMESG
Sbjct: 93 SVVQKRFGFAPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHIMESG 152
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRAQRA SMKFKDGY+IS+G P K ++D A+R V RQ
Sbjct: 153 AKGCEVVVSGKLRAQRAKSMKFKDGYLISTGEPSKMFVDQAIRSVQLRQG 202
>gi|357016985|gb|AET50521.1| hypothetical protein [Eimeria tenella]
Length = 233
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/110 (66%), Positives = 88/110 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FP +SVEL+AE+V NRGLCA+AQAESLR + L + + ACYGVLR IMESG
Sbjct: 73 SLVQKRFGFPPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRAQRA SMKF+DGY+IS+G P + ++ A+R V RQ
Sbjct: 133 AKGCEVVVSGKLRAQRAKSMKFRDGYIISTGEPRQRFVSQAIRSVQLRQG 182
>gi|269115422|gb|ACZ26288.1| putative ribosomal protein S3 [Mayetiola destructor]
Length = 250
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 83/110 (75%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF F +VELYAEKV RGLCAIAQAESLR + + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P Y+DSA RHVL RQ
Sbjct: 131 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNAYVDSATRHVLLRQG 180
>gi|453089728|gb|EMF17768.1| ribosomal protein S3 [Mycosphaerella populorum SO2202]
Length = 276
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/110 (66%), Positives = 85/110 (77%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S + RF+FP +SV LYA KV +RGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 81 SLITHRFRFPPDSVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 140
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++IDSA RHVL RQ
Sbjct: 141 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQG 190
>gi|307207014|gb|EFN84837.1| 40S ribosomal protein S3 [Harpegnathos saltator]
Length = 242
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/112 (69%), Positives = 87/112 (77%), Gaps = 3/112 (2%)
Query: 1 SAVQKRFKF--PENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIME 58
S VQKRF F P+N VELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIME
Sbjct: 72 SVVQKRFNFKEPQN-VELYAEKVAVRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME 130
Query: 59 SGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
SGAKGCEV+VSGKLR QRA SMKF DG MI SG P EY+++A RHVL RQ
Sbjct: 131 SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQG 182
>gi|429329723|gb|AFZ81482.1| 40S ribosomal protein S3, putative [Babesia equi]
Length = 218
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F +SVELYAE+V NRGLCA+AQAESLR + L + + A YGVLR IMESG
Sbjct: 73 SLVQKRFGFSSDSVELYAERVENRGLCAMAQAESLRYKLLKGLAVRRAAYGVLRHIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGY+IS+G P + Y+ +AVR V RQ
Sbjct: 133 AKGCEVIVSGKLRAQRAKSMKFKDGYIISTGQPAQAYVSTAVRSVQLRQG 182
>gi|312071288|ref|XP_003138539.1| 40S ribosomal protein S3 [Loa loa]
Length = 249
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 84/110 (76%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F + +VELYAEKV NRGLCA+AQ ESLR + + + + ACYGVLRFIMES
Sbjct: 73 SVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESN 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+GCEVIVSGKLR QRA SMKF DG MI SG PV +YI AVRHV RQ
Sbjct: 133 AQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQG 182
>gi|209489412|gb|ACI49174.1| hypothetical protein Csp3_JD02.002 [Caenorhabditis angaria]
Length = 247
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F E SVEL+AEKV+NRGLCA+AQ ESLR + + + + ACYGVLRFIMESG
Sbjct: 73 SVVQKRFGFEEGSVELFAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+G EVIVSGKLR QRA +MKF DG MI SG+PV +YI AVRHV RQ
Sbjct: 133 AQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQG 182
>gi|393905484|gb|EFO25530.2| 40S ribosomal protein S3 [Loa loa]
Length = 250
Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 84/110 (76%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F + +VELYAEKV NRGLCA+AQ ESLR + + + + ACYGVLRFIMES
Sbjct: 74 SVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESN 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+GCEVIVSGKLR QRA SMKF DG MI SG PV +YI AVRHV RQ
Sbjct: 134 AQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQG 183
>gi|170577011|ref|XP_001893846.1| 40S ribosomal protein S3 [Brugia malayi]
gi|158599891|gb|EDP37316.1| 40S ribosomal protein S3, putative [Brugia malayi]
Length = 250
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 84/110 (76%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F + +VELYAEKV NRGLCA+AQ ESLR + + + + ACYGVLRFIMES
Sbjct: 74 SVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESN 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+GCEVIVSGKLR QRA SMKF DG MI SG PV +YI AVRHV RQ
Sbjct: 134 AQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQG 183
>gi|402586120|gb|EJW80058.1| 30S ribosomal protein S3 [Wuchereria bancrofti]
Length = 202
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 84/110 (76%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F + +VELYAEKV NRGLCA+AQ ESLR + + + + ACYGVLRFIMES
Sbjct: 26 SVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESN 85
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+GCEVIVSGKLR QRA SMKF DG MI SG PV +YI AVRHV RQ
Sbjct: 86 AQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQG 135
>gi|379072592|gb|AFC92928.1| ribosomal protein S3B, partial [Hymenochirus curtipes]
Length = 152
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 84/110 (76%), Gaps = 10/110 (9%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQA ++R+ ACYGVLRFIMESG
Sbjct: 6 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQALAVRR----------ACYGVLRFIMESG 55
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA +MKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 56 AKGCEVVVSGKLRGQRAKAMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 105
>gi|33772509|gb|AAQ54656.1| 40S ribosomal protein S3 [Oikopleura dioica]
gi|313212505|emb|CBY36474.1| unnamed protein product [Oikopleura dioica]
gi|313217134|emb|CBY38302.1| unnamed protein product [Oikopleura dioica]
gi|313233568|emb|CBY09740.1| unnamed protein product [Oikopleura dioica]
Length = 239
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/111 (67%), Positives = 89/111 (80%), Gaps = 6/111 (5%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR---KEGLAVIVCKMACYGVLRFIMES 59
VQKRF+ + +VEL+AEKV NRGLCAIAQ ESLR + GLAV + A YGVLRFIMES
Sbjct: 76 VQKRFQIKDGAVELFAEKVANRGLCAIAQCESLRYKLEGGLAV---RRAAYGVLRFIMES 132
Query: 60 GAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GAKGCEV++SGKLR QRA +MKF DG MI +G+PV EY+D+AVRHV+ RQ
Sbjct: 133 GAKGCEVVISGKLRGQRAKAMKFTDGLMIHTGHPVTEYVDTAVRHVMLRQG 183
>gi|215260017|gb|ACJ64493.1| 40S ribosomal protein S3 [Culex tarsalis]
Length = 221
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 84/110 (76%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF F +VELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 42 AVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 101
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR Q A SMKF DG MI SG P EY+D+A RHVL RQ
Sbjct: 102 AKGCEVVVSGKLRGQCAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQG 151
>gi|62645168|ref|XP_575143.1| PREDICTED: 40S ribosomal protein S3-like [Rattus norvegicus]
gi|109470011|ref|XP_001057158.1| PREDICTED: 40S ribosomal protein S3-like [Rattus norvegicus]
Length = 243
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQK+F FPE SVELYAEKV GLCAIAQAESL + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKQFVFPEGSVELYAEKVATGGLCAIAQAESLCYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+GCEV+VSGKLR QRA S+KF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 131 AEGCEVVVSGKLRGQRAKSVKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|398398591|ref|XP_003852753.1| hypothetical protein MYCGRDRAFT_42422 [Zymoseptoria tritici IPO323]
gi|339472634|gb|EGP87729.1| hypothetical protein MYCGRDRAFT_42422 [Zymoseptoria tritici IPO323]
Length = 265
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/110 (66%), Positives = 84/110 (76%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S + RFKFP +SV LYA KV +RGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 72 SLITHRFKFPADSVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++ID A RHVL RQ
Sbjct: 132 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQG 181
>gi|238683661|gb|ACR54109.1| ribosomal protein S3 [Palaemonetes varians]
Length = 189
Score = 150 bits (380), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/110 (67%), Positives = 85/110 (77%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQ+RF F + +VELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 17 SLVQRRFGFADGTVELYAEKVAQRGLCAIAQAESLRYKLVGGLAVRRACYGVLRFIMESG 76
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMK DG MI SG P + Y+D+AVRHV RQ
Sbjct: 77 AKGCEVVVSGKLRGQRAKSMKSTDGLMIHSGEPRRHYVDTAVRHVHLRQG 126
>gi|452848046|gb|EME49978.1| hypothetical protein DOTSEDRAFT_122074 [Dothistroma septosporum
NZE10]
Length = 266
Score = 150 bits (380), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/110 (65%), Positives = 84/110 (76%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S + RF+FP +SV LYA KV +RGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 72 SLITHRFRFPPDSVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLRA RA SMKF DG+MI SG P K++ID A RHVL RQ
Sbjct: 132 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQG 181
>gi|209693449|ref|NP_001129413.1| ribosomal protein S3 [Acyrthosiphon pisum]
gi|239790667|dbj|BAH71881.1| ACYPI005949 [Acyrthosiphon pisum]
Length = 245
Score = 150 bits (379), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/110 (65%), Positives = 85/110 (77%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF F + +VEL+AEKV RGLCA+AQAESLR + + + + ACYGVLRFIMESG
Sbjct: 72 SLIQKRFDFKDKAVELFAEKVAQRGLCAVAQAESLRYKLIGGLAVRRACYGVLRFIMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P +Y++ A RHVL RQ
Sbjct: 132 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNVATRHVLLRQG 181
>gi|353240330|emb|CCA72204.1| probable 40S ribosomal protein S3 [Piriformospora indica DSM 11827]
Length = 268
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/110 (64%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPE S+ELYAEKV +RGL A+AQ ESLR + L + + A YGVLRF+MES
Sbjct: 71 SLVQKRFKFPEGSLELYAEKVLHRGLSAVAQCESLRYKLLGGLAVRRAAYGVLRFVMESN 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV++SGKLRA RA SMKF +G+MI SG P ++++D AVRHV+ RQ
Sbjct: 131 AKGCEVVISGKLRAARAKSMKFTEGFMIHSGQPARDFVDEAVRHVMLRQG 180
>gi|195452576|ref|XP_002073414.1| GK14111 [Drosophila willistoni]
gi|194169499|gb|EDW84400.1| GK14111 [Drosophila willistoni]
Length = 244
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/108 (67%), Positives = 82/108 (75%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRF F +ELYAEKV RGLCAIAQAESLR + + + ACYGVLRFIMESGAK
Sbjct: 73 VQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 133 GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 180
>gi|18496083|emb|CAD12886.1| ribosomal protein S3 [Drosophila virilis]
Length = 244
Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/108 (67%), Positives = 82/108 (75%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRF F +ELYAEKV RGLCAIAQAESLR + + + ACYGVLRFIMESGAK
Sbjct: 73 VQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 133 GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 180
>gi|195390345|ref|XP_002053829.1| RpS3 [Drosophila virilis]
gi|194151915|gb|EDW67349.1| RpS3 [Drosophila virilis]
Length = 246
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/108 (67%), Positives = 82/108 (75%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRF F +ELYAEKV RGLCAIAQAESLR + + + ACYGVLRFIMESGAK
Sbjct: 75 VQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAK 134
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 135 GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 182
>gi|195113493|ref|XP_002001302.1| GI22047 [Drosophila mojavensis]
gi|193917896|gb|EDW16763.1| GI22047 [Drosophila mojavensis]
Length = 246
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/108 (67%), Positives = 82/108 (75%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRF F +ELYAEKV RGLCAIAQAESLR + + + ACYGVLRFIMESGAK
Sbjct: 75 VQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAK 134
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 135 GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 182
>gi|125772881|ref|XP_001357699.1| GA19858 [Drosophila pseudoobscura pseudoobscura]
gi|194745943|ref|XP_001955444.1| GF16244 [Drosophila ananassae]
gi|195158647|ref|XP_002020197.1| GL13632 [Drosophila persimilis]
gi|54637431|gb|EAL26833.1| GA19858 [Drosophila pseudoobscura pseudoobscura]
gi|190628481|gb|EDV44005.1| GF16244 [Drosophila ananassae]
gi|194116966|gb|EDW39009.1| GL13632 [Drosophila persimilis]
Length = 246
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/108 (67%), Positives = 82/108 (75%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRF F +ELYAEKV RGLCAIAQAESLR + + + ACYGVLRFIMESGAK
Sbjct: 75 VQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAK 134
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 135 GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 182
>gi|6540574|gb|AAF16402.1| ribosomal protein RPS3 [Musca domestica]
Length = 165
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/108 (67%), Positives = 82/108 (75%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRF F +ELYAEKV RGLCAIAQAESLR + + + ACYGVLRFIMESGAK
Sbjct: 40 VQKRFSFEPGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAK 99
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 100 GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 147
>gi|195053458|ref|XP_001993643.1| GH20000 [Drosophila grimshawi]
gi|193895513|gb|EDV94379.1| GH20000 [Drosophila grimshawi]
Length = 246
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/108 (67%), Positives = 82/108 (75%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRF F +ELYAEKV RGLCAIAQAESLR + + + ACYGVLRFIMESGAK
Sbjct: 75 VQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAK 134
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 135 GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 182
>gi|399216964|emb|CCF73651.1| unnamed protein product [Babesia microti strain RI]
Length = 218
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/110 (66%), Positives = 87/110 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F +SVELYAE++ +RGLCA+AQAESLR + L + + A YGVLR IMESG
Sbjct: 72 SLVQKRFGFAPDSVELYAERIEHRGLCAMAQAESLRYKLLKGLAVRRAAYGVLRHIMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A GCE+I+SGKLRAQRA SMKFKDGY+IS+G P K+YI+SA R V RQ
Sbjct: 132 ANGCEIIISGKLRAQRAKSMKFKDGYLISTGEPSKQYINSATRSVQLRQG 181
>gi|289743349|gb|ADD20422.1| ribosomal protein S3 [Glossina morsitans morsitans]
Length = 263
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/110 (66%), Positives = 83/110 (75%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF F +ELYAEKV RGLCAIAQAESLR + + + ACYGVLRFIMESG
Sbjct: 93 AMVQKRFNFEPGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESG 152
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 153 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 202
>gi|223999667|ref|XP_002289506.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974714|gb|EED93043.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 270
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/110 (66%), Positives = 85/110 (77%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F E +VELYAE+V NRGLCA AQAESL+ + LA + + ACYGV+RF+ME+
Sbjct: 75 SVVQKRFDFAEGAVELYAERVQNRGLCAQAQAESLKFKLLAGLAVRRACYGVVRFVMEAS 134
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLR QRA MKF DGYMI +G+ + Y D AVRHVL RQ
Sbjct: 135 AKGCEVIVSGKLRGQRAKGMKFGDGYMIKTGHAGQVYTDVAVRHVLMRQG 184
>gi|397567805|gb|EJK45790.1| hypothetical protein THAOC_35575 [Thalassiosira oceanica]
Length = 266
Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/109 (66%), Positives = 86/109 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F E +VELYAE+V NRGLCA AQAESL+ + LA + + ACYGV+RF+ME+
Sbjct: 74 SVVQKRFDFAEGAVELYAERVQNRGLCAQAQAESLKFKLLAGLAVRRACYGVVRFVMEAS 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEVIVSGKLR QRA +MKF DGYMI +G+ + Y D+AVRHV RQ
Sbjct: 134 AKGCEVIVSGKLRGQRAKAMKFGDGYMIKTGHAGQVYTDTAVRHVAMRQ 182
>gi|328867452|gb|EGG15834.1| 40S ribosomal protein S3 [Dictyostelium fasciculatum]
Length = 219
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/111 (63%), Positives = 87/111 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F E +V ++AEKV NRGLCA+AQAESL+ + LA + + ACY +L +M G
Sbjct: 75 SLVQKRFGFKEGAVTIFAEKVQNRGLCAVAQAESLKIKLLAGLPVRRACYAILHQVMTKG 134
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQAS 111
AKGCEVIVSGKLRAQRA SMKF+DGYMI SG P ++++D AVRHVL RQ +
Sbjct: 135 AKGCEVIVSGKLRAQRAKSMKFRDGYMIKSGQPSQQFVDFAVRHVLLRQGT 185
>gi|301107834|ref|XP_002902999.1| 40S ribosomal protein S3-3 [Phytophthora infestans T30-4]
gi|262098117|gb|EEY56169.1| 40S ribosomal protein S3-3 [Phytophthora infestans T30-4]
Length = 246
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/109 (63%), Positives = 87/109 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FP+ +VELYAE+V NRGLC+ AQAESL+ L + + ACY V+RF+ME+G
Sbjct: 71 SVVQKRFNFPDGAVELYAERVANRGLCSQAQAESLKYRLLGGLAVRRACYSVVRFVMEAG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKG +VIVSGKLRAQRA +MKF +GYM+ +G +EY+D+AVRHVL RQ
Sbjct: 131 AKGVQVIVSGKLRAQRAKAMKFNEGYMVKTGNASQEYVDTAVRHVLMRQ 179
>gi|349803955|gb|AEQ17450.1| putative ribosomal protein s3 [Hymenochirus curtipes]
Length = 235
Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/110 (70%), Positives = 83/110 (75%), Gaps = 11/110 (10%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQ LAV + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQ--------LAV---RRACYGVLRFIMESG 119
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA +MKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 120 AKGCEVVVSGKLRGQRAKAMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 169
>gi|348670844|gb|EGZ10665.1| hypothetical protein PHYSODRAFT_287105 [Phytophthora sojae]
Length = 249
Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/109 (63%), Positives = 87/109 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FP+ +VELYAE+V NRGLC+ AQAESL+ L + + ACY V+RF+ME+G
Sbjct: 71 SVVQKRFNFPDGAVELYAERVANRGLCSQAQAESLKYRLLGGLAVRRACYSVVRFVMEAG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKG +VIVSGKLRAQRA +MKF +GYM+ +G +EY+D+AVRHVL RQ
Sbjct: 131 AKGVQVIVSGKLRAQRAKAMKFNEGYMVKTGNASQEYVDTAVRHVLMRQ 179
>gi|195502880|ref|XP_002098418.1| RpS3 [Drosophila yakuba]
gi|194184519|gb|EDW98130.1| RpS3 [Drosophila yakuba]
Length = 246
Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/108 (66%), Positives = 82/108 (75%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRF F +ELYAEKV RGLCAIAQAESLR + + + ACYGVLR+IMESGAK
Sbjct: 75 VQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAK 134
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 135 GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 182
>gi|290977385|ref|XP_002671418.1| predicted protein [Naegleria gruberi]
gi|284084987|gb|EFC38674.1| predicted protein [Naegleria gruberi]
Length = 228
Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/110 (63%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF F E +ELYAE V N+GL AIAQAESL+++ + + + ACYGVLRF+M+SG
Sbjct: 73 SVIQKRFGFEEGKIELYAENVKNKGLSAIAQAESLKQKLMEGVAVRKACYGVLRFVMDSG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKG VIVSGKLRAQRA SMKF +GYMI +G PVK+Y+D AVRHV +Q
Sbjct: 133 AKGGAVIVSGKLRAQRAKSMKFAEGYMIRTGQPVKDYVDIAVRHVYMKQG 182
>gi|195331295|ref|XP_002032338.1| GM26502 [Drosophila sechellia]
gi|195573126|ref|XP_002104546.1| GD21014 [Drosophila simulans]
gi|194121281|gb|EDW43324.1| GM26502 [Drosophila sechellia]
gi|194200473|gb|EDX14049.1| GD21014 [Drosophila simulans]
Length = 246
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/108 (66%), Positives = 83/108 (76%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRF F +ELYAEKV +RGLCAIAQAESLR + + + ACYGVLR+IMESGAK
Sbjct: 75 VQKRFNFETGRIELYAEKVASRGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAK 134
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 135 GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 182
>gi|38048231|gb|AAR10018.1| similar to Drosophila melanogaster RpS3, partial [Drosophila
yakuba]
Length = 215
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/108 (66%), Positives = 82/108 (75%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRF F +ELYAEKV RGLCAIAQAESLR + + + ACYGVLR+IMESGAK
Sbjct: 75 VQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAK 134
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 135 GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 182
>gi|198456485|ref|XP_002136327.1| GA25150, partial [Drosophila pseudoobscura pseudoobscura]
gi|198142674|gb|EDY71398.1| GA25150, partial [Drosophila pseudoobscura pseudoobscura]
Length = 204
Score = 147 bits (372), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/108 (66%), Positives = 82/108 (75%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRF F +ELYAEKV RGLCAIAQAESLR + + + ACYGVLRFI+ESGAK
Sbjct: 33 VQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIIESGAK 92
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 93 GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 140
>gi|164658119|ref|XP_001730185.1| hypothetical protein MGL_2567 [Malassezia globosa CBS 7966]
gi|159104080|gb|EDP42971.1| hypothetical protein MGL_2567 [Malassezia globosa CBS 7966]
Length = 264
Score = 147 bits (372), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 66/107 (61%), Positives = 86/107 (80%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
V++RF+FPE S+ELYAEKV NRGL A+AQ ESLR + L + + A YGVLR++MESGAK
Sbjct: 74 VRQRFRFPEGSLELYAEKVANRGLHAVAQCESLRNKLLGGLPVRRAAYGVLRYVMESGAK 133
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV++SGK+R RA SMKF DG+MI +G P K+++D A+RHVL +Q
Sbjct: 134 GCEVVISGKVRGARAKSMKFNDGFMIHTGQPAKDFVDVAIRHVLMKQ 180
>gi|296094|emb|CAA51425.1| ribosomal protein S3 [Drosophila melanogaster]
Length = 246
Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 72/108 (66%), Positives = 82/108 (75%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRF F +ELYAEKV RGLCAIAQAESLR + + + ACYGVLR+IMESGAK
Sbjct: 75 VQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGELAVRRACYGVLRYIMESGAK 134
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 135 GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 182
>gi|194910452|ref|XP_001982149.1| GG11202 [Drosophila erecta]
gi|190656787|gb|EDV54019.1| GG11202 [Drosophila erecta]
Length = 246
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 71/108 (65%), Positives = 82/108 (75%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRF F +ELYAEKV RG+CAIAQAESLR + + + ACYGVLR+IMESGAK
Sbjct: 75 VQKRFNFETGRIELYAEKVATRGICAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAK 134
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 135 GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 182
>gi|85857570|gb|ABC86320.1| IP15838p [Drosophila melanogaster]
Length = 253
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/108 (66%), Positives = 82/108 (75%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRF F +ELYAEKV RGLCAIAQAESLR + + + ACYGVLR+IMESGAK
Sbjct: 82 VQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAK 141
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 142 GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 189
>gi|17136324|ref|NP_476632.1| ribosomal protein S3 [Drosophila melanogaster]
gi|548856|sp|Q06559.1|RS3_DROME RecName: Full=40S ribosomal protein S3
gi|290275|gb|AAA28875.1| ribosomal protein S3/AP endonuclease DNA repair protein [Drosophila
melanogaster]
gi|7300992|gb|AAF56129.1| ribosomal protein S3 [Drosophila melanogaster]
gi|21430306|gb|AAM50831.1| LD47488p [Drosophila melanogaster]
gi|220950134|gb|ACL87610.1| RpS3-PA [synthetic construct]
gi|220959146|gb|ACL92116.1| RpS3-PA [synthetic construct]
gi|346426335|gb|AEO27696.1| RpS3-PA [Drosophila melanogaster]
Length = 246
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/108 (66%), Positives = 82/108 (75%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRF F +ELYAEKV RGLCAIAQAESLR + + + ACYGVLR+IMESGAK
Sbjct: 75 VQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAK 134
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL RQ
Sbjct: 135 GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 182
>gi|156084414|ref|XP_001609690.1| 40S ribosomal protein S3 protein [Babesia bovis T2Bo]
gi|154796942|gb|EDO06122.1| 40S ribosomal protein S3 protein, putative [Babesia bovis]
Length = 223
Score = 147 bits (370), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 72/110 (65%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF F ++VELYAE+V ++GLCA+AQAESLR + L + + A YGVLR IMESG
Sbjct: 73 SLIQKRFGFSPDTVELYAERVEHKGLCAMAQAESLRYKLLKGLAVRRAAYGVLRHIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLRAQRA SMKFKDGY+IS+G P K ++ SA R V RQ
Sbjct: 133 AKGCEVIVSGKLRAQRAKSMKFKDGYLISTGQPAKTFVTSATRSVQLRQG 182
>gi|388507388|gb|AFK41760.1| unknown [Lotus japonicus]
Length = 258
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/110 (62%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPE +VELYAE+V+NR L AIAQAESLR + L + + ACYGVLR+IME+G
Sbjct: 72 SLVQKRFNFPEGNVELYAERVSNRALSAIAQAESLRFKLLGGLAVRRACYGVLRYIMENG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKG E+++SGKLRA RA +MKF+DGYMI SG V Y+D AV+H+ +Q
Sbjct: 132 AKGVEIVISGKLRAARAKAMKFRDGYMIKSGDAVNHYVDYAVKHIQLKQG 181
>gi|219114717|ref|XP_002178154.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409889|gb|EEC49819.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 253
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/110 (63%), Positives = 85/110 (77%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F + +VELYAE+V NRGLCA AQAESL+ + L + + ACYGV+RF+ME+
Sbjct: 67 SVVQKRFNFADGAVELYAERVQNRGLCAQAQAESLKFKLLGGLAVRRACYGVVRFVMEAQ 126
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+V+GKLR QRA MKF DGYMI +G+ + Y DSAVRHVL RQ
Sbjct: 127 AKGCEVVVTGKLRGQRAKGMKFGDGYMIKTGHAGQVYTDSAVRHVLMRQG 176
>gi|449304480|gb|EMD00487.1| hypothetical protein BAUCODRAFT_99745 [Baudoinia compniacensis UAMH
10762]
Length = 282
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/109 (65%), Positives = 82/109 (75%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S + RF+FP SV LYA KV +RGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 82 SLITHRFRFPPESVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 141
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKGCEV+VSGKLRA RA SMKF DG+MI SG P ++ID A RHVL RQ
Sbjct: 142 AKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAVDFIDHATRHVLLRQ 190
>gi|308498826|ref|XP_003111599.1| CRE-RPS-3 protein [Caenorhabditis remanei]
gi|308239508|gb|EFO83460.1| CRE-RPS-3 protein [Caenorhabditis remanei]
Length = 255
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/118 (64%), Positives = 86/118 (72%), Gaps = 8/118 (6%)
Query: 1 SAVQKRFKFPENSVE--------LYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGV 52
S VQKRF F E SVE LYAEKV+NRGLCA+AQ ESLR + + + + ACYGV
Sbjct: 73 SVVQKRFAFEEGSVEVKFSFRNLLYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGV 132
Query: 53 LRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
LRFIMESGA+G EVIVSGKLR QRA +MKF DG MI SG+PV +YI AVRHV RQ
Sbjct: 133 LRFIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQG 190
>gi|66800843|ref|XP_629347.1| 40S ribosomal protein S3 [Dictyostelium discoideum AX4]
gi|74834663|sp|P90526.1|RS3_DICDI RecName: Full=40S ribosomal protein S3
gi|1688320|gb|AAB36959.1| RpgG [Dictyostelium discoideum]
gi|60462650|gb|EAL60852.1| 40S ribosomal protein S3 [Dictyostelium discoideum AX4]
Length = 218
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/111 (64%), Positives = 86/111 (77%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F E +V L+AEK+ NRGLCA+AQAESL+ + LA + + ACY ++ IM G
Sbjct: 74 SLVQKRFNFKEGTVVLFAEKILNRGLCAVAQAESLKLKLLAGLPVRKACYAIVHQIMTRG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQAS 111
AKGCEVIVSGKLRAQRA SMKF+DGYMI SG P K++ID A RHVL RQ +
Sbjct: 134 AKGCEVIVSGKLRAQRAKSMKFRDGYMIKSGQPSKDFIDFACRHVLLRQGT 184
>gi|426343098|ref|XP_004038155.1| PREDICTED: 40S ribosomal protein S3-like isoform 1 [Gorilla gorilla
gorilla]
gi|426343100|ref|XP_004038156.1| PREDICTED: 40S ribosomal protein S3-like isoform 2 [Gorilla gorilla
gorilla]
gi|426343102|ref|XP_004038157.1| PREDICTED: 40S ribosomal protein S3-like isoform 3 [Gorilla gorilla
gorilla]
gi|426343104|ref|XP_004038158.1| PREDICTED: 40S ribosomal protein S3-like isoform 4 [Gorilla gorilla
gorilla]
gi|426343106|ref|XP_004038159.1| PREDICTED: 40S ribosomal protein S3-like isoform 5 [Gorilla gorilla
gorilla]
gi|426343108|ref|XP_004038160.1| PREDICTED: 40S ribosomal protein S3-like isoform 6 [Gorilla gorilla
gorilla]
gi|426343110|ref|XP_004038161.1| PREDICTED: 40S ribosomal protein S3-like isoform 7 [Gorilla gorilla
gorilla]
Length = 243
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/108 (68%), Positives = 82/108 (75%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESGAK
Sbjct: 73 VQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GC+V+ SGKLR QRA SMK DG MI S P+ Y+ +AV HVL RQ
Sbjct: 133 GCKVVASGKLRGQRAKSMKSVDGLMIHSRDPINYYVGTAVCHVLLRQG 180
>gi|294932119|ref|XP_002780125.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239890023|gb|EER11920.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 261
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 85/107 (79%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
V++RF FPENSVEL+AE+V+NR LCA AQAESLR + L + + A YGVLRF+ME+GAK
Sbjct: 78 VERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVLRFVMENGAK 137
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
G EV VSGKLRAQRA MKF DGY++S+G P + Y+D A+R+V RQ
Sbjct: 138 GVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQ 184
>gi|294875936|ref|XP_002767474.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239869132|gb|EER00192.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 261
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 85/107 (79%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
V++RF FPENSVEL+AE+V+NR LCA AQAESLR + L + + A YGVLRF+ME+GAK
Sbjct: 78 VERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVLRFVMENGAK 137
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
G EV VSGKLRAQRA MKF DGY++S+G P + Y+D A+R+V RQ
Sbjct: 138 GVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQ 184
>gi|330840814|ref|XP_003292404.1| 40S ribosomal protein S3 [Dictyostelium purpureum]
gi|325077360|gb|EGC31078.1| 40S ribosomal protein S3 [Dictyostelium purpureum]
Length = 218
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/111 (63%), Positives = 86/111 (77%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F E +V L+AEK+ NRGLCA+AQAESL+ + LA + + ACY ++ IM G
Sbjct: 74 SLVQKRFNFKEGTVVLFAEKILNRGLCAVAQAESLKLKLLAGLPVRKACYAIVHQIMTRG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQAS 111
AKGCEVIVSGKLRAQRA SMKF+DGYMI SG P K+++D A RHVL RQ +
Sbjct: 134 AKGCEVIVSGKLRAQRAKSMKFRDGYMIKSGQPSKDFVDFACRHVLLRQGT 184
>gi|294897613|ref|XP_002776024.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239882489|gb|EER07840.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 193
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 85/107 (79%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
V++RF FPENSVEL+AE+V+NR LCA AQAESLR + L + + A YGVLRF+ME+GAK
Sbjct: 78 VERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVLRFVMENGAK 137
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
G EV VSGKLRAQRA MKF DGY++S+G P + Y+D A+R+V RQ
Sbjct: 138 GVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQ 184
>gi|294886505|ref|XP_002771736.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239875488|gb|EER03552.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 184
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 85/107 (79%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
V++RF FPENSVEL+AE+V+NR LCA AQAESLR + L + + A YGVLRF+ME+GAK
Sbjct: 78 VERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVLRFVMENGAK 137
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
G EV VSGKLRAQRA MKF DGY++S+G P + Y+D A+R+V RQ
Sbjct: 138 GVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQ 184
>gi|294877217|ref|XP_002767926.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239869954|gb|EER00644.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 200
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 85/107 (79%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
V++RF FPENSVEL+AE+V+NR LCA AQAESLR + L + + A YGVLRF+ME+GAK
Sbjct: 78 VERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVLRFVMENGAK 137
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
G EV VSGKLRAQRA MKF DGY++S+G P + Y+D A+R+V RQ
Sbjct: 138 GVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQ 184
>gi|441645490|ref|XP_003254540.2| PREDICTED: 40S ribosomal protein S3 [Nomascus leucogenys]
Length = 181
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/102 (69%), Positives = 80/102 (78%)
Query: 9 FPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIV 68
+P ++LYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESGAKGCEV+V
Sbjct: 17 YPLLPLKLYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVV 76
Query: 69 SGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
SGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 77 SGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 118
>gi|268619106|gb|ACZ13329.1| 40S ribosomal protein S3 [Bursaphelenchus xylophilus]
Length = 272
Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/110 (66%), Positives = 82/110 (74%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF F VELYAEKV NRGLCA+AQ ESLR + + + ACYGVLRFIMES
Sbjct: 93 AVVQKRFGFNVGQVELYAEKVANRGLCAVAQCESLRFKLCGGLAVRRACYGVLRFIMESQ 152
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCE+IVSGKLR QRA +MKF DG MI SG+PV EY+ AVRHV RQ
Sbjct: 153 AKGCEIIVSGKLRGQRAKAMKFVDGIMIHSGHPVNEYVQQAVRHVQLRQG 202
>gi|405973234|gb|EKC37958.1| 40S ribosomal protein S3 [Crassostrea gigas]
Length = 237
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/110 (65%), Positives = 82/110 (74%), Gaps = 8/110 (7%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPE +VE RGLCAIAQ ESLR + + + + ACYGVLRFIMESG
Sbjct: 77 SVVQKRFNFPEGTVE--------RGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESG 128
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEV+VSGKLR QRA SMKF DG MI SG P+ +Y+D+AVRHVL RQ
Sbjct: 129 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPINDYVDTAVRHVLLRQG 178
>gi|209733334|gb|ACI67536.1| 40S ribosomal protein S3 [Salmo salar]
Length = 244
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/102 (69%), Positives = 81/102 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE +VELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAV 102
+KGCEV+VSGKLR QRA SMKF G MI SG PV Y+D+A+
Sbjct: 131 SKGCEVVVSGKLRGQRAKSMKFVGGLMIHSGDPVNYYVDTAM 172
>gi|294939314|ref|XP_002782408.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239894014|gb|EER14203.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 244
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/108 (62%), Positives = 85/108 (78%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
V++RF FPENSVEL+AE+V+NR LCA AQAESLR + L + + A YGVLRF+ME+GAK
Sbjct: 63 VERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVLRFVMENGAK 122
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
G EV VSGKLRAQRA MKF DGY++S+G P + Y+D A+R+V RQ
Sbjct: 123 GVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQG 170
>gi|70947163|ref|XP_743223.1| ribosomal protein S3 [Plasmodium chabaudi chabaudi]
gi|56522619|emb|CAH84779.1| ribosomal protein S3, putative [Plasmodium chabaudi chabaudi]
Length = 220
Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/111 (65%), Positives = 86/111 (77%), Gaps = 1/111 (0%)
Query: 1 SAVQKRF-KFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMES 59
S VQKRF NSVEL+AE+V NRGLCA+AQAESLR + L + + ACYGVLR IMES
Sbjct: 69 SLVQKRFFNKSTNSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHIMES 128
Query: 60 GAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GAKGCEVIVSGKLRAQRA SMKFKDGY+IS+G P K ++++A R +Q
Sbjct: 129 GAKGCEVIVSGKLRAQRAKSMKFKDGYLISTGEPSKRFVNTATRSAQLKQG 179
>gi|379994413|gb|AFD22833.1| 40S ribosomal protein S3 [Collodictyon triciliatum]
Length = 173
Score = 144 bits (363), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/103 (66%), Positives = 83/103 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF+F E ++EL+AE V++RGLCA+AQAESLR + L + + ACYGV+RF ME+G
Sbjct: 71 SLVQKRFRFKEGTIELFAENVSSRGLCAVAQAESLRYKLLGGLAVRRACYGVMRFAMEAG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVR 103
AKG EV VSGKLRAQRA MKF+DGYMI SG P K Y+DSAVR
Sbjct: 131 AKGVEVAVSGKLRAQRAKVMKFRDGYMIKSGNPTKVYVDSAVR 173
>gi|365988130|ref|XP_003670896.1| hypothetical protein NDAI_0F03350 [Naumovozyma dairenensis CBS 421]
gi|343769667|emb|CCD25653.1| hypothetical protein NDAI_0F03350 [Naumovozyma dairenensis CBS 421]
Length = 243
Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/107 (61%), Positives = 86/107 (80%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFK+ ++ LYAE+V +RGL AIAQAES++ + L + + A YGV+R++MESGAK
Sbjct: 73 VQKRFKYTPGTIVLYAERVQDRGLSAIAQAESMKFKLLNGLAIRRAAYGVVRYVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV+VSGKLRA RA +MKF DG++I SG PVK++ID+A RHVL RQ
Sbjct: 133 GCEVVVSGKLRAARAKAMKFADGFLIHSGQPVKDFIDTATRHVLMRQ 179
>gi|406603719|emb|CCH44744.1| 40S ribosomal protein [Wickerhamomyces ciferrii]
Length = 246
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/109 (60%), Positives = 87/109 (79%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKF ++ LYAE+V +RGL A+AQAESL+ + L + + A YGV+R++MESG
Sbjct: 71 SLVQKRFKFAPGTIVLYAERVQDRGLSAVAQAESLKFKLLNGLAIRRAAYGVVRYVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKG EV++SGKLRA RA +MKF+DG++I SG PVK++ID+A RHVL RQ
Sbjct: 131 AKGVEVVISGKLRAARAKAMKFQDGFLIHSGQPVKDFIDTATRHVLLRQ 179
>gi|68070737|ref|XP_677280.1| ribosomal protein S3 [Plasmodium berghei strain ANKA]
gi|56497334|emb|CAH98166.1| ribosomal protein S3, putative [Plasmodium berghei]
Length = 218
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/111 (64%), Positives = 86/111 (77%), Gaps = 1/111 (0%)
Query: 1 SAVQKRF-KFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMES 59
S VQKRF NSVEL+AE+V NRGLCA+AQAESLR + L + + ACYGVLR IMES
Sbjct: 67 SLVQKRFFNKLTNSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHIMES 126
Query: 60 GAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GAKGCEVIVSGKLRAQRA SMKF+DGY+IS+G P K ++++A R +Q
Sbjct: 127 GAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQG 177
>gi|9022435|gb|AAF82383.1|AF281313_1 ribosomal protein S3 [Homo sapiens]
Length = 158
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/95 (73%), Positives = 76/95 (80%)
Query: 16 LYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKLRAQ 75
LYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESGAKGCEV+VSGKLR Q
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 76 RATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
RA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 95
>gi|410075477|ref|XP_003955321.1| hypothetical protein KAFR_0A07520 [Kazachstania africana CBS 2517]
gi|372461903|emb|CCF56186.1| hypothetical protein KAFR_0A07520 [Kazachstania africana CBS 2517]
Length = 241
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 84/107 (78%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFK+ ++ LYAE+V +RGL AIAQAES++ + L + + A YGV+RF+MESGAK
Sbjct: 73 VQKRFKYAPGTIVLYAERVQDRGLSAIAQAESMKFKLLNGLAIRRAAYGVVRFVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV+VSGKLRA RA SMKF DG++I SG PV ++ID A RHVL RQ
Sbjct: 133 GCEVVVSGKLRAARAKSMKFADGFLIHSGQPVNDFIDIATRHVLMRQ 179
>gi|339240791|ref|XP_003376321.1| 40S ribosomal protein S3-A [Trichinella spiralis]
gi|316974969|gb|EFV58434.1| 40S ribosomal protein S3-A [Trichinella spiralis]
Length = 330
Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/110 (65%), Positives = 81/110 (73%), Gaps = 2/110 (1%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF PE S LYAEKV RGLCAIAQ ESLR + + + + ACYG+LR+IMES
Sbjct: 165 SLVQKRFNLPEES--LYAEKVAQRGLCAIAQCESLRFKLIGGLPVRRACYGILRYIMESQ 222
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGCEVIVSGKLR QRA SMKF DG MI SG P EY++ VRHV+ RQ
Sbjct: 223 AKGCEVIVSGKLRGQRAKSMKFVDGLMIHSGDPTNEYVEKGVRHVVLRQG 272
>gi|124810210|ref|XP_001348801.1| 40S ribosomal protein S3, putative [Plasmodium falciparum 3D7]
gi|23497701|gb|AAN37240.1| 40S ribosomal protein S3, putative [Plasmodium falciparum 3D7]
Length = 221
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/111 (63%), Positives = 86/111 (77%), Gaps = 1/111 (0%)
Query: 1 SAVQKRF-KFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMES 59
S VQKRF NSVEL+AE+V +RGLCA+AQAESLR + L + + ACYGVLR IMES
Sbjct: 71 SLVQKRFFNKSTNSVELFAERVEHRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHIMES 130
Query: 60 GAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GAKGCEVIVSGKLRAQRA SMKF+DGY+IS+G P K ++++A R +Q
Sbjct: 131 GAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQG 181
>gi|366995337|ref|XP_003677432.1| hypothetical protein NCAS_0G01920 [Naumovozyma castellii CBS 4309]
gi|342303301|emb|CCC71079.1| hypothetical protein NCAS_0G01920 [Naumovozyma castellii CBS 4309]
Length = 244
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 85/107 (79%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFK+ ++ LYAE+V +RGL AIAQAES++ + L + + A YGV+R++MESGAK
Sbjct: 73 VQKRFKYAPGTIVLYAERVQDRGLSAIAQAESMKFKLLNGLAIRRAAYGVVRYVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV+VSGKLRA RA +MKF DG++I SG PV ++ID+A RHVL RQ
Sbjct: 133 GCEVVVSGKLRAARAKAMKFSDGFLIHSGQPVNDFIDTATRHVLMRQ 179
>gi|156100003|ref|XP_001615729.1| 40S ribosomal protein S3 [Plasmodium vivax Sal-1]
gi|221059123|ref|XP_002260207.1| ribosomal protein S3 [Plasmodium knowlesi strain H]
gi|148804603|gb|EDL46002.1| 40S ribosomal protein S3, putative [Plasmodium vivax]
gi|193810280|emb|CAQ41474.1| ribosomal protein S3, putative [Plasmodium knowlesi strain H]
gi|389585194|dbj|GAB67925.1| 40S ribosomal protein S3 [Plasmodium cynomolgi strain B]
Length = 222
Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/110 (64%), Positives = 86/110 (78%), Gaps = 1/110 (0%)
Query: 1 SAVQKRF-KFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMES 59
S VQKRF NSVEL+AE+V +RGLCA+AQAESLR + L + + ACYGVLR IMES
Sbjct: 71 SLVQKRFFNKSTNSVELFAERVEHRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHIMES 130
Query: 60 GAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GAKGCEVIVSGKLRAQRA SMKF+DGY+IS+G P K ++++A R +Q
Sbjct: 131 GAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQ 180
>gi|367008326|ref|XP_003678663.1| 40S ribosomal protein S3 [Torulaspora delbrueckii]
gi|359746320|emb|CCE89452.1| hypothetical protein TDEL_0A01200 [Torulaspora delbrueckii]
Length = 245
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 85/107 (79%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFK+ ++ LYAE+V +RGL A+AQAES++ + L + + A YGV+R++MESGAK
Sbjct: 73 VQKRFKYKPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRYVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV+VSGKLRA RA SMKF DG++I SG PV ++ID+A RHVL RQ
Sbjct: 133 GCEVVVSGKLRAARAKSMKFADGFLIHSGQPVNDFIDTATRHVLLRQ 179
>gi|302306412|ref|NP_982809.2| 40S ribosomal protein S3 [Ashbya gossypii ATCC 10895]
gi|299788504|gb|AAS50633.2| ABL138Wp [Ashbya gossypii ATCC 10895]
gi|374106011|gb|AEY94921.1| FABL138Wp [Ashbya gossypii FDAG1]
Length = 244
Score = 141 bits (355), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 84/107 (78%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFK+ ++ L+AE+V RGL A+AQAESLR + L + + A YGV+R++MESGAK
Sbjct: 73 VQKRFKYQPGTIVLFAERVQERGLSAVAQAESLRFKLLNGLAIRRAAYGVVRYVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV++SGKLRA RA SMKF DG++I SG PV ++ID+A RHVL RQ
Sbjct: 133 GCEVVISGKLRAARAKSMKFSDGFLIHSGQPVNDFIDTATRHVLLRQ 179
>gi|428179210|gb|EKX48082.1| small subunit ribosomal protein S3e, cytoplasmic [Guillardia theta
CCMP2712]
Length = 249
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 86/110 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
SAVQKRF F E +VE++AE+V+NRGL A+AQAESL+ + L + + ACYGV+RF+MESG
Sbjct: 72 SAVQKRFGFAEGTVEMFAERVHNRGLSAMAQAESLKFKLLGGLQVRRACYGVIRFVMESG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A G EVIVSGK R QRA SMKFK G++I++G P + +ID A RHV+ +Q
Sbjct: 132 ALGVEVIVSGKARVQRAKSMKFKSGFLITTGRPAQVFIDKATRHVMMKQG 181
>gi|255711614|ref|XP_002552090.1| 40S ribosomal protein S3 [Lachancea thermotolerans]
gi|238933468|emb|CAR21652.1| KLTH0B06974p [Lachancea thermotolerans CBS 6340]
Length = 248
Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 85/107 (79%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFK+ S+ LYAE+V +RGL A+AQAES++ + L + + A YGV+R++MESGAK
Sbjct: 73 VQKRFKYQAGSIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRYVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV++SGKLRA RA SMKF DG++I SG PV ++ID+A RHVL RQ
Sbjct: 133 GCEVVISGKLRAARAKSMKFADGFLIHSGQPVADFIDTATRHVLLRQ 179
>gi|401623905|gb|EJS41984.1| rps3p [Saccharomyces arboricola H-6]
Length = 240
Score = 140 bits (353), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 85/107 (79%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFK+ ++ LYAE+V +RGL A+AQAES++ + L + + A YGV+R++MESGAK
Sbjct: 73 VQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRYVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV+VSGKLRA RA +MKF DG++I SG PV ++ID+A RHVL RQ
Sbjct: 133 GCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQ 179
>gi|365758790|gb|EHN00617.1| Rps3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 240
Score = 140 bits (353), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 85/107 (79%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFK+ ++ LYAE+V +RGL A+AQAES++ + L + + A YGV+R++MESGAK
Sbjct: 73 VQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRYVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV+VSGKLRA RA +MKF DG++I SG PV ++ID+A RHVL RQ
Sbjct: 133 GCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQ 179
>gi|398364505|ref|NP_014221.3| ribosomal 40S subunit protein S3 [Saccharomyces cerevisiae S288c]
gi|1173255|sp|P05750.5|RS3_YEAST RecName: Full=40S ribosomal protein S3; AltName: Full=RP13;
AltName: Full=YS3
gi|313103665|pdb|3IZB|B Chain B, Localization Of The Small Subunit Ribosomal Proteins Into
A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
gi|315113450|pdb|3O2Z|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
Of The First 80s In The Asymmetric Unit.
gi|315113478|pdb|3O30|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
Of The Second 80s In The Asymmetric Unit.
gi|364506099|pdb|3U5C|D Chain D, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome A
gi|364506137|pdb|3U5G|D Chain D, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome B
gi|457164|dbj|BAA04973.1| ribosomal protein YS3 [Saccharomyces cerevisiae]
gi|1302158|emb|CAA96070.1| RPS3 [Saccharomyces cerevisiae]
gi|1463121|gb|AAC49380.1| ribosomal protein S3 [Saccharomyces cerevisiae]
gi|151944361|gb|EDN62639.1| ribosomal protein S3 [Saccharomyces cerevisiae YJM789]
gi|190409159|gb|EDV12424.1| ribosomal protein S3 [Saccharomyces cerevisiae RM11-1a]
gi|207341817|gb|EDZ69765.1| YNL178Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270755|gb|EEU05916.1| Rps3p [Saccharomyces cerevisiae JAY291]
gi|259149181|emb|CAY82423.1| Rps3p [Saccharomyces cerevisiae EC1118]
gi|285814479|tpg|DAA10373.1| TPA: ribosomal 40S subunit protein S3 [Saccharomyces cerevisiae
S288c]
gi|323331906|gb|EGA73318.1| Rps3p [Saccharomyces cerevisiae AWRI796]
gi|323335912|gb|EGA77190.1| Rps3p [Saccharomyces cerevisiae Vin13]
gi|323346843|gb|EGA81122.1| Rps3p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352903|gb|EGA85205.1| Rps3p [Saccharomyces cerevisiae VL3]
gi|349580763|dbj|GAA25922.1| K7_Rps3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763526|gb|EHN05054.1| Rps3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296815|gb|EIW07916.1| Rps3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 240
Score = 140 bits (353), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 85/107 (79%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFK+ ++ LYAE+V +RGL A+AQAES++ + L + + A YGV+R++MESGAK
Sbjct: 73 VQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRYVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV+VSGKLRA RA +MKF DG++I SG PV ++ID+A RHVL RQ
Sbjct: 133 GCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQ 179
>gi|444317298|ref|XP_004179306.1| hypothetical protein TBLA_0B09710 [Tetrapisispora blattae CBS 6284]
gi|387512346|emb|CCH59787.1| hypothetical protein TBLA_0B09710 [Tetrapisispora blattae CBS 6284]
Length = 248
Score = 140 bits (353), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 85/107 (79%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFK+ SV LYAE++ +RGL A+AQAES++ + L + + A YGV+R++MESGAK
Sbjct: 81 VQKRFKYKAGSVVLYAERIQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRYVMESGAK 140
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV+VSGKLRA RA +MKF DG++I SG PV ++ID+A RHVL RQ
Sbjct: 141 GCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQ 187
>gi|49258823|pdb|1S1H|C Chain C, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From
Yeast Obtained By Docking Atomic Models For Rna And
Protein Components Into A 11.7 A Cryo-Em Map. This File,
1s1h, Contains 40s Subunit. The 60s Ribosomal Subunit Is
In File 1s1i
Length = 192
Score = 140 bits (353), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 85/107 (79%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFK+ ++ LYAE+V +RGL A+AQAES++ + L + + A YGV+R++MESGAK
Sbjct: 72 VQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRYVMESGAK 131
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV+VSGKLRA RA +MKF DG++I SG PV ++ID+A RHVL RQ
Sbjct: 132 GCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQ 178
>gi|401839576|gb|EJT42741.1| RPS3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 240
Score = 140 bits (353), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 85/107 (79%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFK+ ++ LYAE+V +RGL A+AQAES++ + L + + A YGV+R++MESGAK
Sbjct: 73 VQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRYVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV+VSGKLRA RA +MKF DG++I SG PV ++ID+A RHVL RQ
Sbjct: 133 GCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQ 179
>gi|254580157|ref|XP_002496064.1| 40S ribosomal protein S3 [Zygosaccharomyces rouxii]
gi|238938955|emb|CAR27131.1| ZYRO0C09636p [Zygosaccharomyces rouxii]
Length = 246
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 84/107 (78%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFK+ ++ LYAE+V RGL A+AQAES++ + L + + A YGV+R++MESGAK
Sbjct: 73 VQKRFKYKPGTIVLYAERVQERGLSAVAQAESMKFKLLNGLAIRRAAYGVVRYVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV+VSGKLRA RA SMKF DG++I SG PV ++ID+A RHVL RQ
Sbjct: 133 GCEVVVSGKLRAARAKSMKFADGFLIHSGQPVADFIDTATRHVLMRQ 179
>gi|468426|gb|AAA35010.1| ribosomal protein S3 [Saccharomyces cerevisiae]
Length = 240
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 85/107 (79%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFK+ ++ LYAE+V +RGL A+AQAES++ + L + + A YGV+R++MESGAK
Sbjct: 73 VQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRYVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV+VSGKLRA RA +MKF DG++I SG PV ++ID+A RHVL RQ
Sbjct: 133 GCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQ 179
>gi|50553820|ref|XP_504321.1| 40S ribosomal protein S3 [Yarrowia lipolytica]
gi|49650190|emb|CAG79920.1| YALI0E23694p [Yarrowia lipolytica CLIB122]
Length = 246
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 84/109 (77%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF+ PE SV +YAE+V RGL A+AQ ES++ + L + + A YGV+R++M++G
Sbjct: 73 SLVQKRFRLPEGSVTIYAERVQERGLSAVAQCESVKYKLLNGLAIRRAAYGVVRYVMDAG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKG EV+VSGKLRA RA SMKF DG+MI SG PV ++ID+A RHVL RQ
Sbjct: 133 AKGVEVVVSGKLRAARAKSMKFADGFMIHSGQPVNDFIDTATRHVLLRQ 181
>gi|281500809|pdb|3JYV|C Chain C, Structure Of The 40s Rrna And Proteins And PE TRNA FOR
EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces
Lanuginosus Ribosome At 8.9a Resolution
Length = 188
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 85/107 (79%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFK+ ++ LYAE+V +RGL A+AQAES++ + L + + A YGV+R++MESGAK
Sbjct: 68 VQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRYVMESGAK 127
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV+VSGKLRA RA +MKF DG++I SG PV ++ID+A RHVL RQ
Sbjct: 128 GCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQ 174
>gi|156840842|ref|XP_001643799.1| hypothetical protein Kpol_480p28 [Vanderwaltozyma polyspora DSM
70294]
gi|156114424|gb|EDO15941.1| hypothetical protein Kpol_480p28 [Vanderwaltozyma polyspora DSM
70294]
Length = 234
Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 84/107 (78%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFKF ++ LYAE+V +RGL A+AQAES++ + L + + A YGV+R++MESGAK
Sbjct: 73 VQKRFKFKPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRYVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV+VSGKLRA RA +MKF DG++I SG PV ++ID A RHVL RQ
Sbjct: 133 GCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDVATRHVLMRQ 179
>gi|323307522|gb|EGA60793.1| Rps3p [Saccharomyces cerevisiae FostersO]
Length = 184
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 85/107 (79%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFK+ ++ LYAE+V +RGL A+AQAES++ + L + + A YGV+R++MESGAK
Sbjct: 17 VQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRYVMESGAK 76
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV+VSGKLRA RA +MKF DG++I SG PV ++ID+A RHVL RQ
Sbjct: 77 GCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQ 123
>gi|291238325|ref|XP_002739080.1| PREDICTED: ribosomal protein S3-like [Saccoglossus kowalevskii]
Length = 250
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 76/95 (80%)
Query: 16 LYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKLRAQ 75
LYAEKV RGLCAIAQ ESLR + L + + ACYGVLRFIMESGAKGCEV+VSGKLR Q
Sbjct: 71 LYAEKVAARGLCAIAQCESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 130
Query: 76 RATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
RA SMKF DG MI SG PV +Y+D+AVRHV+ RQ
Sbjct: 131 RAKSMKFVDGLMIHSGNPVNDYVDTAVRHVMLRQG 165
>gi|363754787|ref|XP_003647609.1| hypothetical protein Ecym_6420 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891246|gb|AET40792.1| hypothetical protein Ecym_6420 [Eremothecium cymbalariae
DBVPG#7215]
Length = 328
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 84/107 (78%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFK+ ++ L+AE+V RGL A+AQAESL+ + L + + A YGV+R++MESGAK
Sbjct: 157 VQKRFKYQPGTIVLFAERVQERGLSAVAQAESLKFKLLNGLAIRRAAYGVVRYVMESGAK 216
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV++SGKLRA RA SMKF DG++I SG PV ++ID+A RHVL RQ
Sbjct: 217 GCEVVISGKLRAARAKSMKFSDGFLIHSGQPVNDFIDTATRHVLLRQ 263
>gi|50291535|ref|XP_448200.1| 40S ribosomal protein S3 [Candida glabrata CBS 138]
gi|49527511|emb|CAG61151.1| unnamed protein product [Candida glabrata]
Length = 247
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 84/107 (78%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFK+ ++ LYAE+V +RGL A+AQAES++ + L + + A YGV+R++MESGAK
Sbjct: 73 VQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRYVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV+VSGKLRA RA +MKF DG++I SG PV ++ID A RHVL RQ
Sbjct: 133 GCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDVATRHVLMRQ 179
>gi|239505101|gb|ACR78696.1| ribosomal protein S3 [Rimicaris exoculata]
Length = 126
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/98 (69%), Positives = 77/98 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F + +VELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 29 SLVQKRFGFADGTVELYAEKVAQRGLCAIAQAESLRYKLVGGLAVRRACYGVLRFIMESG 88
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYI 98
AKGCEV+VSGKLR QRA SMKF DG MI SG P + Y+
Sbjct: 89 AKGCEVVVSGKLRGQRAKSMKFTDGLMIHSGEPRRHYV 126
>gi|367007661|ref|XP_003688560.1| 40S ribosomal protein S3 [Tetrapisispora phaffii CBS 4417]
gi|357526869|emb|CCE66126.1| hypothetical protein TPHA_0O01590 [Tetrapisispora phaffii CBS 4417]
Length = 238
Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 84/107 (78%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFKF +V LYAE+V +RGL A+AQAES++ + L + + A YGV+R++MESGAK
Sbjct: 73 VQKRFKFKAGTVVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVIRYVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV++SGKLRA RA +MK+ DG++I SG PV ++ID A RHVL RQ
Sbjct: 133 GCEVVISGKLRAARAKAMKYADGFLIHSGQPVNDFIDVATRHVLMRQ 179
>gi|50306913|ref|XP_453432.1| 40S ribosomal protein S3 [Kluyveromyces lactis NRRL Y-1140]
gi|49642566|emb|CAH00528.1| KLLA0D08305p [Kluyveromyces lactis]
Length = 237
Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 61/107 (57%), Positives = 86/107 (80%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
++KRFK+ ++ LYAE+V++RGL A+AQAES++ + L + + A YGV+R++MESGAK
Sbjct: 73 IEKRFKYKRGTIALYAERVHDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRYVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV++SGKLRA RA SMKF DG++I SG PV ++I++A RHVL RQ
Sbjct: 133 GCEVVISGKLRAARAKSMKFADGFLIHSGQPVNDFIETATRHVLLRQ 179
>gi|254564691|ref|XP_002489456.1| 40S ribosomal protein S3 [Komagataella pastoris GS115]
gi|238029252|emb|CAY67175.1| Protein component of the small (40S) ribosomal subunit
[Komagataella pastoris GS115]
gi|328349885|emb|CCA36285.1| 40S ribosomal protein S3 [Komagataella pastoris CBS 7435]
Length = 243
Score = 137 bits (345), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/107 (61%), Positives = 81/107 (75%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFK E V LYAE+V +RGL A+ Q ESLR + L + + A YGV+RF+M+SGAK
Sbjct: 74 VQKRFKIDEGKVILYAERVQDRGLSAVTQCESLRYKLLNGLAIRRAAYGVVRFVMDSGAK 133
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
G EV+VSGKLRA RA SMKF DG+MI SG P K++I++A RHVL RQ
Sbjct: 134 GVEVVVSGKLRAARAKSMKFADGFMIHSGQPAKDFIETATRHVLLRQ 180
>gi|215260015|gb|ACJ64492.1| 40S ribosomal protein S3 [Culex tarsalis]
Length = 165
Score = 137 bits (345), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 74/95 (77%)
Query: 16 LYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKLRAQ 75
+YAEKV RGLCA AQAESLR + + + + ACYGVLRFIMESGAKGCEV+VSGKLR Q
Sbjct: 1 MYAEKVATRGLCATAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 76 RATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
RA SMKF DG MI SG P EY+D+A RHVL RQ
Sbjct: 61 RAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQG 95
>gi|188572377|gb|ACD65095.1| putative 40S ribosomal protein RPS3 [Novocrania anomala]
Length = 170
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/100 (65%), Positives = 76/100 (76%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPE +VELYAEKV RGLCAIAQ ESLR + + + + ACYGVLRFIMESG
Sbjct: 71 SVVQKRFSFPEGTVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRQACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDS 100
A GCEV+VSGKLR QRA ++KF DG MI G P +Y ++
Sbjct: 131 ANGCEVVVSGKLRGQRAKALKFVDGLMIHRGEPTNDYAET 170
>gi|403216300|emb|CCK70797.1| hypothetical protein KNAG_0F01290 [Kazachstania naganishii CBS
8797]
Length = 249
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 83/107 (77%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFK+ ++ L+AE+V RGL A+AQAES++ + L + + A YGV+R++MESGAK
Sbjct: 73 VQKRFKYAPGTIVLFAERVQERGLSAVAQAESMKFKLLNGLAIRRAAYGVVRYVMESGAK 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV+VSGKLRA RA +MKF DG++I SG PV ++ID A RHVL RQ
Sbjct: 133 GCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDVATRHVLMRQ 179
>gi|358336359|dbj|GAA54888.1| small subunit ribosomal protein S3e [Clonorchis sinensis]
Length = 230
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/110 (62%), Positives = 81/110 (73%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S ++KRF F E ++EL AEK+ RGL AIAQAESLR + + + ACYG+LRFIMESG
Sbjct: 73 SVLEKRFGFAEGTLELCAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+G EVIVSGK++ QRA SMKF DG MI SG PV YID AVRHVL Q
Sbjct: 133 ARGAEVIVSGKIKGQRAKSMKFSDGLMIHSGDPVNYYIDKAVRHVLLPQG 182
>gi|255710087|gb|ACU30863.1| 40S ribosomal protein S3 [Ochlerotatus triseriatus]
Length = 157
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/93 (70%), Positives = 73/93 (78%)
Query: 18 AEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKLRAQRA 77
AEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESGAKGCEV+VSGKLR QRA
Sbjct: 1 AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRA 60
Query: 78 TSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
SMKF DG MI SG P EY+D+A RHVL RQ
Sbjct: 61 KSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQG 93
>gi|70909549|emb|CAJ17196.1| ribosomal protein S3e [Mycetophagus quadripustulatus]
Length = 158
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 74/95 (77%)
Query: 16 LYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKLRAQ 75
LY EKV NRGLCAIAQAESLR + + + + ACYGVLR+IME GAKGCEV+VSGKLR Q
Sbjct: 2 LYGEKVANRGLCAIAQAESLRFKLIGGLAVRRACYGVLRYIMECGAKGCEVVVSGKLRGQ 61
Query: 76 RATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
RA SMKF DG MI SG P +Y+D+A RHVL RQ
Sbjct: 62 RAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 96
>gi|71017745|ref|XP_759103.1| hypothetical protein UM02956.1 [Ustilago maydis 521]
gi|46098895|gb|EAK84128.1| hypothetical protein UM02956.1 [Ustilago maydis 521]
Length = 239
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 80/107 (74%), Gaps = 11/107 (10%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFKFP+NS+ELYAEKV NRGL A+AQ ESLR + L + + A YGVLRF+MESGAK
Sbjct: 74 VQKRFKFPDNSLELYAEKVQNRGLHAVAQCESLRYKLLGGLAVRRAAYGVLRFVMESGAK 133
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEV++SGKLRA RA SMKF D +++D AVRHVL +Q
Sbjct: 134 GCEVVISGKLRAARAKSMKFTD-----------DFVDEAVRHVLMKQ 169
>gi|38047525|gb|AAR09665.1| similar to Drosophila melanogaster RpS3, partial [Drosophila
yakuba]
Length = 172
Score = 134 bits (337), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 75/98 (76%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRF F +ELYAEKV RGLCAIAQAESLR + + + ACYGVLR+IMESGAK
Sbjct: 75 VQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAK 134
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDS 100
GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++
Sbjct: 135 GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVET 172
>gi|29841430|gb|AAP06462.1| similar to GenBank Accession Number AK010678 ribosomal protein S3
in Mus musculus [Schistosoma japonicum]
Length = 226
Score = 134 bits (336), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 81/110 (73%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF FP+ ++ L+AEK+ RGL AIAQAESLR + + + ACYG+LRFIMESG
Sbjct: 73 SVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+G EVIVSGK++ QRA +MKF DG MI SG PV Y+D AVRHV Q
Sbjct: 133 ARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQG 182
>gi|189502878|gb|ACE06820.1| unknown [Schistosoma japonicum]
Length = 230
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 81/110 (73%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF FP+ ++ L+AEK+ RGL AIAQAESLR + + + ACYG+LRFIMESG
Sbjct: 73 SVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+G EVIVSGK++ QRA +MKF DG MI SG PV Y+D AVRHV Q
Sbjct: 133 ARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQG 182
>gi|226482822|emb|CAX79378.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 202
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 81/110 (73%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF FP+ ++ L+AEK+ RGL AIAQAESLR + + + ACYG+LRFIMESG
Sbjct: 45 SVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESG 104
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+G EVIVSGK++ QRA +MKF DG MI SG PV Y+D AVRHV Q
Sbjct: 105 ARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQG 154
>gi|226476708|emb|CAX72246.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476710|emb|CAX72247.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476714|emb|CAX72249.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476718|emb|CAX72251.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476722|emb|CAX72253.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476724|emb|CAX72254.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476726|emb|CAX72255.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476728|emb|CAX72256.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476730|emb|CAX72257.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476732|emb|CAX72258.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476734|emb|CAX72259.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482826|emb|CAX79380.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482828|emb|CAX79381.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482830|emb|CAX79382.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482832|emb|CAX79383.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482834|emb|CAX79384.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482838|emb|CAX79386.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482840|emb|CAX79387.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482842|emb|CAX79388.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482844|emb|CAX79389.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482846|emb|CAX79390.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482848|emb|CAX79391.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482850|emb|CAX79392.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482856|emb|CAX79395.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482858|emb|CAX79396.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482860|emb|CAX79397.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482862|emb|CAX79398.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482866|emb|CAX79400.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482868|emb|CAX79401.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 81/110 (73%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF FP+ ++ L+AEK+ RGL AIAQAESLR + + + ACYG+LRFIMESG
Sbjct: 73 SVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+G EVIVSGK++ QRA +MKF DG MI SG PV Y+D AVRHV Q
Sbjct: 133 ARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQG 182
>gi|226476720|emb|CAX72252.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 81/110 (73%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF FP+ ++ L+AEK+ RGL AIAQAESLR + + + ACYG+LRFIMESG
Sbjct: 73 SVLQKRFGFPDGTLGLFAEKMTLRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+G EVIVSGK++ QRA +MKF DG MI SG PV Y+D AVRHV Q
Sbjct: 133 ARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQG 182
>gi|226482836|emb|CAX79385.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 80/110 (72%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF FP ++ L+AEK+ RGL AIAQAESLR + + + ACYG+LRFIMESG
Sbjct: 73 SVLQKRFGFPNGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+G EVIVSGK++ QRA +MKF DG MI SG PV Y+D AVRHV Q
Sbjct: 133 ARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQG 182
>gi|281206799|gb|EFA80983.1| 40S ribosomal protein S3 [Polysphondylium pallidum PN500]
Length = 221
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/111 (62%), Positives = 81/111 (72%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F E +V LYAEKV NRGLCAIAQA+SL+ + L + + ACY ++ IM G
Sbjct: 77 SLVQKRFGFAEGTVTLYAEKVQNRGLCAIAQADSLKGKLLLGLPVRRACYAIVHQIMTKG 136
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQAS 111
AKGCEVIVSGKLRAQRA +MKF DGYMI SG P + +D A HVL RQ +
Sbjct: 137 AKGCEVIVSGKLRAQRAKAMKFTDGYMIKSGQPSQNMVDFACCHVLLRQGT 187
>gi|160331719|ref|XP_001712566.1| rps3 [Hemiselmis andersenii]
gi|159766015|gb|ABW98241.1| rps3 [Hemiselmis andersenii]
Length = 246
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 81/108 (75%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
++KRF+F E S+E+Y EK+ N+ LCAI+QAESLR + L +V + ACY L+ MESGAK
Sbjct: 102 IKKRFQFDEKSLEIYVEKIINKNLCAISQAESLRYKLLRGMVIRRACYSTLKSTMESGAK 161
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GC + VSGKLRAQRA +MKF DGY+I SG PV++YI+ A RH RQ
Sbjct: 162 GCIISVSGKLRAQRAKTMKFIDGYIIHSGKPVEDYIEKATRHCFLRQG 209
>gi|226476736|emb|CAX72260.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 81/110 (73%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF FP+ ++ L+AEK+ RGL AIAQAESLR + + + ACYG+LRFIMESG
Sbjct: 73 SVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+G EVIVSGK++ QRA +MKF DG +I SG PV Y+D AVRHV Q
Sbjct: 133 ARGAEVIVSGKIKGQRAKAMKFCDGLLIHSGDPVNYYVDKAVRHVQLPQG 182
>gi|226482824|emb|CAX79379.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 81/110 (73%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF FP+ ++ L+AEK+ RGL AIAQAESL+ + + + ACYG+LRFIMESG
Sbjct: 73 SVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLKYKLTYGLPVRKACYGILRFIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+G EVIVSGK++ QRA +MKF DG MI SG PV Y+D AVRHV Q
Sbjct: 133 ARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQG 182
>gi|226482864|emb|CAX79399.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 80/110 (72%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF FP+ ++ L+AEK+ RGL AIAQAE LR + + + ACYG+LRFIMESG
Sbjct: 73 SVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAEPLRYKLTYGLPVRKACYGILRFIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+G EVIVSGK++ QRA +MKF DG MI SG PV Y+D AVRHV Q
Sbjct: 133 ARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQG 182
>gi|391337612|ref|XP_003743161.1| PREDICTED: 40S ribosomal protein S3-like [Metaseiulus occidentalis]
Length = 239
Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 80/110 (72%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF F E +V L+AEKV+ RGLCAI Q ESLR + + + + ACY VLR IME+
Sbjct: 71 AVVQKRFGFKEGTVNLFAEKVSARGLCAITQCESLRYKLIGGLAVRRACYSVLRCIMEAE 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A GCEV+VSGKLR QRA SMKF +G MI SG P Y+++AVRHVL +Q
Sbjct: 131 AMGCEVVVSGKLRGQRAKSMKFVEGLMIHSGDPTNHYVETAVRHVLLKQG 180
>gi|256075800|ref|XP_002574204.1| 40S ribosomal protein S3 [Schistosoma mansoni]
gi|238659403|emb|CAZ30437.1| 40S ribosomal protein S3, putative [Schistosoma mansoni]
Length = 230
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 80/110 (72%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF F + ++ L+AEK+ RGL AIAQAESLR + + + ACYG+LRFIMESG
Sbjct: 73 SVLQKRFGFADGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+G EVIVSGK++ QRA +MKF DG MI SG PV YID AVRHV Q
Sbjct: 133 ARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNNYIDKAVRHVQLPQG 182
>gi|289724874|gb|ADD18372.1| 40S ribosomal protein S3 [Glossina morsitans morsitans]
Length = 225
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 80/110 (72%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF F + ++ L+AEK+ RGL AIAQAESLR + + + ACYG+LRFIMESG
Sbjct: 68 SVLQKRFGFADGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESG 127
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+G EVIVSGK++ QRA +MKF DG MI SG PV YID AVRHV Q
Sbjct: 128 ARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNNYIDKAVRHVQLPQG 177
>gi|260946855|ref|XP_002617725.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238849579|gb|EEQ39043.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 242
Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 80/109 (73%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S + KRFK P++ + +YAE+V R L A QAE+L+ + L+ + + A YGVLRF M +G
Sbjct: 75 SLIVKRFKLPQDGIVIYAERVEERALSAAVQAEALKAKLLSGLPIRRAAYGVLRFTMAAG 134
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKG EV++SGKLRA RA S K+ DG+MI SG P +E+ID+A+RHVL RQ
Sbjct: 135 AKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTREFIDTAIRHVLMRQ 183
>gi|300176595|emb|CBK24260.2| unnamed protein product [Blastocystis hominis]
Length = 239
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 79/107 (73%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRF F EN+V LYAE+V R LCA QAE+L+ LA + + A V+R +E+GAK
Sbjct: 74 VQKRFGFNENNVVLYAERVAERSLCAQTQAEALKYRLLAGLPVRRAATAVIRSALEAGAK 133
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEVIVSGKLR QRA +MKFK+GYMI +GY KE++D A RHVL +Q
Sbjct: 134 GCEVIVSGKLRQQRANAMKFKEGYMIKTGYACKEFVDEATRHVLVKQ 180
>gi|226476712|emb|CAX72248.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 80/110 (72%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF FP+ ++ L+AEK+ RGL AIAQAESLR + + + ACYG+LRFIMESG
Sbjct: 73 SVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+G EVIVSGK++ QRA +MKF G MI SG PV Y+D AVRHV Q
Sbjct: 133 ARGAEVIVSGKIKGQRAKAMKFCYGLMIHSGDPVNYYVDKAVRHVQLPQG 182
>gi|300121261|emb|CBK21641.2| unnamed protein product [Blastocystis hominis]
gi|300176039|emb|CBK23350.2| unnamed protein product [Blastocystis hominis]
Length = 239
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/107 (59%), Positives = 79/107 (73%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRF F EN+V LYAE+V R LCA QAE+L+ LA + + A Y V+R +E+GAK
Sbjct: 74 VQKRFGFNENNVVLYAERVAERSLCAQTQAEALKYRLLAGLPVRRAAYAVIRSALEAGAK 133
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GCEVIVSGKLR QRA +MKFK+GYMI +G KE++D A RHVL +Q
Sbjct: 134 GCEVIVSGKLRQQRANAMKFKEGYMIKTGNACKEFVDEATRHVLVKQ 180
>gi|426369813|ref|XP_004051878.1| PREDICTED: 40S ribosomal protein S3 isoform 5 [Gorilla gorilla
gorilla]
Length = 154
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 69/86 (80%)
Query: 25 GLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKD 84
GLCAIAQAESLR + L + + ACYGVLRFIMESGAKGCEV+VSGKLR QRA SMKF D
Sbjct: 6 GLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVD 65
Query: 85 GYMISSGYPVKEYIDSAVRHVLXRQA 110
G MI SG PV Y+D+AVRHVL RQ
Sbjct: 66 GLMIHSGDPVNYYVDTAVRHVLLRQG 91
>gi|162605846|ref|XP_001713438.1| 40S ribosomal protein S3 [Guillardia theta]
gi|13794370|gb|AAK39747.1|AF083031_104 40S ribosomal protein S3 [Guillardia theta]
Length = 218
Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 77/108 (71%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
++KRF F EN + LY EK+NNR LC I QAESLR + L V + ACY +LR +E+GAK
Sbjct: 74 LKKRFNFGENKLVLYVEKINNRNLCPINQAESLRYKILRGFVLRKACYSILRSTIEAGAK 133
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GC + VSGKLRAQRA +MKF DGY+I SG P +EY SA+RH L Q
Sbjct: 134 GCIISVSGKLRAQRAKTMKFMDGYIIHSGKPSEEYTKSAIRHCLLPQG 181
>gi|320580879|gb|EFW95101.1| 40S ribosomal protein S3 [Ogataea parapolymorpha DL-1]
Length = 235
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 79/110 (71%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKF ++ L+AE+V +RGL A+ Q ESL+ + L + + A YGV+R +MESG
Sbjct: 71 SLIQKRFKFAPGTIVLFAERVQDRGLSAVTQCESLKYKLLNGLAVRRAAYGVIRHVMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKG EV++SGK + RA SMKF DG+MI SG PV ++ID A RHVL RQ
Sbjct: 131 AKGVEVVISGKSKGARAKSMKFGDGFMIHSGQPVNDFIDVATRHVLLRQG 180
>gi|41057930|gb|AAR98922.1| ribosomal protein S3, partial [Ostrinia nubilalis]
gi|441415027|dbj|BAM74497.1| ribosomal protein S3, partial [Ostrinia scapulalis]
Length = 125
Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 67/82 (81%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF PE SVELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 43 SVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 102
Query: 61 AKGCEVIVSGKLRAQRATSMKF 82
A+GCEV+VSGKLR QRA SMKF
Sbjct: 103 ARGCEVVVSGKLRGQRAKSMKF 124
>gi|28189869|dbj|BAC56549.1| similar to ribosomal protein S3 [Bos taurus]
Length = 147
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 67/81 (82%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 67 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 126
Query: 61 AKGCEVIVSGKLRAQRATSMK 81
AKGCEV+VSGKLR QRA SMK
Sbjct: 127 AKGCEVVVSGKLRGQRAKSMK 147
>gi|28189875|dbj|BAC56552.1| similar to S3 ribosomal protein [Bos taurus]
Length = 145
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 62/81 (76%), Positives = 67/81 (82%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 65 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 124
Query: 61 AKGCEVIVSGKLRAQRATSMK 81
AKGCEV+VSGKLR QRA SMK
Sbjct: 125 AKGCEVVVSGKLRGQRAKSMK 145
>gi|237862670|gb|ACR24960.1| ribosomal protein S3 [Lepidochitona cinerea]
Length = 156
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/87 (70%), Positives = 68/87 (78%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQ ESLR + + + + ACYGVL+FIMES
Sbjct: 70 AVVQKRFNFPEGSVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACYGVLKFIMESQ 129
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYM 87
AKGCEV+VSGKLR QRA SM F DG M
Sbjct: 130 AKGCEVVVSGKLRGQRAKSMTFVDGLM 156
>gi|68490130|ref|XP_711114.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|68490165|ref|XP_711097.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|46432373|gb|EAK91858.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|46432391|gb|EAK91875.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|238879938|gb|EEQ43576.1| 40S ribosomal protein S3 [Candida albicans WO-1]
Length = 251
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 77/109 (70%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S + KRFK + +YAE+V RGL A QAE+L+ + L+ + + A YGVLRF M +G
Sbjct: 72 SLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLRFAMGAG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKG EV++SGKLRA RA S K+ DG+MI SG P +++ID A+RHVL RQ
Sbjct: 132 AKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQ 180
>gi|241958636|ref|XP_002422037.1| 40S ribosomal protein S3 [Candida dubliniensis CD36]
gi|223645382|emb|CAX40038.1| ribosomal protein, small subunit, putative [Candida dubliniensis
CD36]
Length = 254
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 77/109 (70%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S + KRFK + +YAE+V RGL A QAE+L+ + L+ + + A YGVLRF M +G
Sbjct: 72 SLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLRFAMGAG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKG EV++SGKLRA RA S K+ DG+MI SG P +++ID A+RHVL RQ
Sbjct: 132 AKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQ 180
>gi|147810849|emb|CAN71792.1| hypothetical protein VITISV_022106 [Vitis vinifera]
Length = 252
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/64 (89%), Positives = 60/64 (93%)
Query: 47 MACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVL 106
+ACYGVLRF+MESGAKGCEVIVSGKLRAQRA SMKFKDGYMISSG PVK+YIDSAVRHVL
Sbjct: 134 LACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVL 193
Query: 107 XRQA 110
RQ
Sbjct: 194 LRQG 197
>gi|126132980|ref|XP_001383015.1| 40S ribosomal protein S3 [Scheffersomyces stipitis CBS 6054]
gi|126094840|gb|ABN64986.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 242
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 74/105 (70%)
Query: 5 KRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGC 64
KRFK + +YAE+V RGL A QAE L+ + L+ + + A YGVLRF M +GAKG
Sbjct: 76 KRFKLSPEGIVIYAERVEERGLSAAVQAEGLKAKLLSGLPIRRAAYGVLRFAMGAGAKGV 135
Query: 65 EVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
EV++SGKLRA RA S K+ DG+MI SG P K++ID A+RHVL RQ
Sbjct: 136 EVVISGKLRAARAKSQKYSDGFMIHSGQPTKDFIDIAIRHVLMRQ 180
>gi|154284746|ref|XP_001543168.1| 40S ribosomal protein S3 [Ajellomyces capsulatus NAm1]
gi|150406809|gb|EDN02350.1| hypothetical protein HCAG_00214 [Ajellomyces capsulatus NAm1]
Length = 239
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 67/82 (81%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRFKFPENSV LYA KV NRGL A+AQ ESLR + L + + ACYGVLRFIMESG
Sbjct: 74 SLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESG 133
Query: 61 AKGCEVIVSGKLRAQRATSMKF 82
AKGCEV+VSGKLRA RA SMKF
Sbjct: 134 AKGCEVVVSGKLRAARAKSMKF 155
>gi|50427849|ref|XP_462537.1| 40S ribosomal protein S3 [Debaryomyces hansenii CBS767]
gi|49658207|emb|CAG91047.1| DEHA2G22770p [Debaryomyces hansenii CBS767]
Length = 239
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 75/105 (71%)
Query: 5 KRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGC 64
KRFK + + +YAE+V RGL A QAE+L+ + L + + A YGVLRF M +GAKG
Sbjct: 76 KRFKISQEGIVIYAERVEERGLSAAVQAEALKSKLLNGLPLRRAAYGVLRFAMGAGAKGV 135
Query: 65 EVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
EV++SGKLRA RA S K+ DG+MI SG P K++ID A+RHVL RQ
Sbjct: 136 EVVISGKLRAARAKSQKYADGFMIHSGQPTKDFIDIAIRHVLMRQ 180
>gi|385302955|gb|EIF47058.1| 40s ribosomal protein s3 [Dekkera bruxellensis AWRI1499]
Length = 261
Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 76/107 (71%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+QKRF F S+ LYAE+V ++GL A Q ESLR + L + + A YGV+RF ME+GAK
Sbjct: 74 LQKRFHFAPGSIVLYAERVRDKGLSAATQCESLRFKLLNGLAVRRAAYGVIRFAMEAGAK 133
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
G EVI++GK + RA +MKF DG+MI +G P K++ID A RHVL RQ
Sbjct: 134 GVEVIIAGKAKGARAKAMKFADGFMIHTGQPAKDFIDVACRHVLMRQ 180
>gi|448100073|ref|XP_004199265.1| Piso0_002691 [Millerozyma farinosa CBS 7064]
gi|359380687|emb|CCE82928.1| Piso0_002691 [Millerozyma farinosa CBS 7064]
Length = 235
Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 75/105 (71%)
Query: 5 KRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGC 64
KRFK + + +YAE+V RGL A QAE+L+ + L + + A YGVLRF M +GAKG
Sbjct: 76 KRFKISQEGIVIYAERVEERGLSAAVQAEALKAKLLNGLPIRRAAYGVLRFAMGAGAKGV 135
Query: 65 EVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
EV++SGKLRA RA S K+ DG+MI SG P K++ID A+RHVL RQ
Sbjct: 136 EVVISGKLRAARAKSQKYADGFMIHSGQPAKDFIDLAIRHVLMRQ 180
>gi|255721609|ref|XP_002545739.1| 40S ribosomal protein S3 [Candida tropicalis MYA-3404]
gi|240136228|gb|EER35781.1| 40S ribosomal protein S3 [Candida tropicalis MYA-3404]
Length = 248
Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 75/109 (68%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S + KRFK + +YAE+V RGL A QAE L+ + L + + A YGVLRF M +G
Sbjct: 72 SLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEGLKAKLLNGLPIRRAAYGVLRFAMGAG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKG EV++SGKLRA RA S K+ DG+MI SG P +++ID A+RHVL RQ
Sbjct: 132 AKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQ 180
>gi|354546036|emb|CCE42765.1| hypothetical protein CPAR2_204080 [Candida parapsilosis]
Length = 247
Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 75/109 (68%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S + KRFK + +YAE+V RGL A QAE+L+ + L + + A YGVLRF M +G
Sbjct: 73 SLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKTKLLNGLPIRRAAYGVLRFAMGAG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKG EV++SGKLRA RA S K+ DG+MI SG P ++ID A+RHVL RQ
Sbjct: 133 AKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTNDFIDIAIRHVLMRQ 181
>gi|448526764|ref|XP_003869393.1| Rps3 ribosomal protein S3 [Candida orthopsilosis Co 90-125]
gi|380353746|emb|CCG23258.1| Rps3 ribosomal protein S3 [Candida orthopsilosis]
Length = 247
Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 75/109 (68%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S + KRFK + +YAE+V RGL A QAE+L+ + L + + A YGVLRF M +G
Sbjct: 73 SLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLNGLPIRRAAYGVLRFAMGAG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKG EV++SGKLRA RA S K+ DG+MI SG P ++ID A+RHVL RQ
Sbjct: 133 AKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTNDFIDIAIRHVLMRQ 181
>gi|146420499|ref|XP_001486205.1| hypothetical protein PGUG_01877 [Meyerozyma guilliermondii ATCC
6260]
gi|146389620|gb|EDK37778.1| hypothetical protein PGUG_01877 [Meyerozyma guilliermondii ATCC
6260]
Length = 238
Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 75/109 (68%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S + KRFK + +YAE++ RGL A QAE+L+ + L + + A YGVLRF M +G
Sbjct: 72 SLIVKRFKLSPEGIVIYAERIEERGLSAAVQAEALKSKLLNGLPMRRAAYGVLRFAMAAG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKG EV++SGKLRA RA S K+ DG+MI SG P ++ID A+RHVL RQ
Sbjct: 132 AKGVEVVISGKLRAARAKSQKYSDGFMIHSGQPTNDFIDIAIRHVLMRQ 180
>gi|448103770|ref|XP_004200121.1| Piso0_002691 [Millerozyma farinosa CBS 7064]
gi|359381543|emb|CCE82002.1| Piso0_002691 [Millerozyma farinosa CBS 7064]
Length = 235
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 75/105 (71%)
Query: 5 KRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGC 64
KRFK + V +YAE+V RGL A QAE+L+ + L + + A YGVLRF M +GAKG
Sbjct: 76 KRFKISQEGVVIYAERVEERGLSAAVQAEALKAKLLNGLPIRRAAYGVLRFAMGAGAKGV 135
Query: 65 EVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
EV++SGKLRA RA S K+ DG+MI SG P +++ID A+RHVL RQ
Sbjct: 136 EVVISGKLRAARAKSQKYADGFMIHSGQPARDFIDLAIRHVLMRQ 180
>gi|149238902|ref|XP_001525327.1| 40S ribosomal protein S3 [Lodderomyces elongisporus NRRL YB-4239]
gi|146450820|gb|EDK45076.1| 40S ribosomal protein S3 [Lodderomyces elongisporus NRRL YB-4239]
Length = 247
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 75/109 (68%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S + KRFK + +YAE+V RGL A QAE+L+ + L + + A YGVLRF M +G
Sbjct: 72 SLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLNGLPIRRAAYGVLRFAMGAG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKG EV++SGKLRA RA S K+ DG+MI SG P ++ID A+RHVL RQ
Sbjct: 132 AKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTNDFIDIAIRHVLMRQ 180
>gi|344303916|gb|EGW34165.1| hypothetical protein SPAPADRAFT_49231 [Spathaspora passalidarum
NRRL Y-27907]
Length = 246
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 75/109 (68%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S + KRFK V +YAE++ R L A QAE+L+ + L+ + + A YGVLRF M +G
Sbjct: 72 SLITKRFKLSPEGVAIYAERIEERALSAAVQAEALKAKLLSGLPIRRAAYGVLRFAMGAG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
AKG EV++SGKLRA RA S K+ DG+MI SG P ++ID A+RHVL RQ
Sbjct: 132 AKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTNDFIDIAIRHVLMRQ 180
>gi|95116517|gb|ABF56171.1| 40S ribosomal protein S3 [Theobroma cacao]
Length = 86
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/73 (82%), Positives = 64/73 (87%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 14 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 73
Query: 61 AKGCEVIVSGKLR 73
AKGCEV+VSG LR
Sbjct: 74 AKGCEVMVSGXLR 86
>gi|330040462|ref|XP_003239924.1| 40S ribosomal protein S3 [Cryptomonas paramecium]
gi|327206850|gb|AEA39026.1| 40S ribosomal protein S3 [Cryptomonas paramecium]
Length = 210
Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 76/108 (70%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
V+KRF ++++ +Y EKV NRGL + QAE LR + L I + ACY VLR IMESGAK
Sbjct: 70 VKKRFGLEDSNLNIYVEKVINRGLVSSIQAEFLRYKLLKGITTRKACYSVLRSIMESGAK 129
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GC + +SGKLRAQRA SMKF +GY+I SG VK YI S+ RH + +Q
Sbjct: 130 GCLITISGKLRAQRAKSMKFTEGYIIHSGQAVKNYISSSTRHCILKQG 177
>gi|399949695|gb|AFP65353.1| 40S ribosomal protein S3 [Chroomonas mesostigmatica CCMP1168]
Length = 217
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 78/110 (70%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ ++KRF F +N + L+ EK+ NRGL A +QAE LR + + I+ + ACY +LR MESG
Sbjct: 71 AMIKKRFNFGDNFISLFVEKIINRGLSANSQAELLRYKLVKGIITRKACYSILRSTMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKGC + VSGK++ QRA +MKF DGY+I SG PV++Y++ A RH +Q
Sbjct: 131 AKGCLISVSGKIKGQRAKTMKFIDGYIIHSGQPVEDYVEKATRHCFLKQG 180
>gi|116488040|gb|ABJ98602.1| 40S ribosomal protein S3 [Scophthalmus maximus]
Length = 147
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 64/77 (83%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRA 77
AKGCEV+VSGKLR QRA
Sbjct: 131 AKGCEVVVSGKLRGQRA 147
>gi|340056073|emb|CCC50402.1| putative 40S ribosomal protein S3 [Trypanosoma vivax Y486]
gi|340057730|emb|CCC52077.1| putative 40S ribosomal protein S3 [Trypanosoma vivax Y486]
Length = 214
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 74/102 (72%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+Q+RF + E V+LYAE+V RGL A+AQAESLR + L+ + + A G++R +MESGAK
Sbjct: 72 IQQRFNYKEGKVQLYAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRLVMESGAK 131
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRH 104
GCEV V GK++ QRA SM F+DGYMI SG K ++ +A RH
Sbjct: 132 GCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVSTATRH 173
>gi|71748612|ref|XP_823361.1| 40S ribosomal protein S3 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|449802224|pdb|3ZEY|X Chain X, High-resolution Cryo-electron Microscopy Structure Of The
Trypanosoma Brucei Ribosome
gi|70833029|gb|EAN78533.1| 40S ribosomal protein S3, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261333299|emb|CBH16294.1| 40S ribosomal protein S3, putative [Trypanosoma brucei gambiense
DAL972]
Length = 214
Score = 119 bits (297), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 76/102 (74%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+Q+RF + E ++L+AE+V RGL A+AQAESLR + L+ + + A G++R++MESGAK
Sbjct: 72 LQQRFNYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRYVMESGAK 131
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRH 104
GCEV + GK++ QRA SM F+DGYMI SG K ++D+A RH
Sbjct: 132 GCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDTATRH 173
>gi|344231772|gb|EGV63654.1| ribosomal protein S3 [Candida tenuis ATCC 10573]
gi|344231773|gb|EGV63655.1| hypothetical protein CANTEDRAFT_114699 [Candida tenuis ATCC 10573]
Length = 237
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 74/105 (70%)
Query: 5 KRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGC 64
KRFK + V +YAE+V RGL A QAE L+ + L+ + + A YGVLRF M +GAKG
Sbjct: 76 KRFKLAKEGVVIYAERVEIRGLSAAVQAEGLKAKLLSGLPFRRAAYGVLRFAMNNGAKGV 135
Query: 65 EVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
EV++SGKLR RA + K+ DG+MI SG P K++ID A+RHVL RQ
Sbjct: 136 EVVISGKLRGARAKAQKYADGFMIHSGQPTKDFIDIAIRHVLMRQ 180
>gi|290562954|gb|ADD38871.1| 40S ribosomal protein S3-B [Lepeophtheirus salmonis]
Length = 229
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 76/110 (69%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S ++KRF F + ++ LYA+KV RG+ A+AQAESL+ + + ACY VL+ IMES
Sbjct: 71 SLIEKRFAFEQGTLSLYADKVAVRGISAVAQAESLKYRLTGGMPVRKACYAVLKQIMESE 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AKG EVIVSGK++ QRA +MKF DG MI SG PV YI AVRHVL Q
Sbjct: 131 AKGGEVIVSGKIKGQRAKAMKFTDGLMIHSGDPVNYYIAKAVRHVLLPQG 180
>gi|261331251|emb|CBH14241.1| 40S ribosomal protein S3, putative [Trypanosoma brucei gambiense
DAL972]
Length = 266
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 78/109 (71%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+Q+RF + E ++L+AE+V RGL A+AQAESLR + L+ + + A G++R++MESGAK
Sbjct: 124 LQQRFNYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRYVMESGAK 183
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQAS 111
GCEV + GK++ QRA SM F+DGYMI SG K ++D+A RH R +
Sbjct: 184 GCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLRAGT 232
>gi|149068845|gb|EDM18397.1| rCG40478, isoform CRA_g [Rattus norvegicus]
Length = 177
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 64/78 (82%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRAT 78
AKGCEV+VSGKLR QRA
Sbjct: 131 AKGCEVVVSGKLRGQRAN 148
>gi|71744718|ref|XP_826989.1| 40S ribosomal protein S3 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831154|gb|EAN76659.1| 40S ribosomal protein S3, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 266
Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 78/109 (71%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+Q+RF + E ++L+AE+V RGL A+AQAESLR + L+ + + A G++R++MESGAK
Sbjct: 124 LQQRFNYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRYVMESGAK 183
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQAS 111
GCEV + GK++ QRA SM F+DGYMI SG K ++D+A RH R +
Sbjct: 184 GCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLRAGT 232
>gi|342183330|emb|CCC92810.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 214
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 76/102 (74%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+Q+RF + E ++L+ E+V RGL A+AQAESLR + L+ + + A G++R++MESGAK
Sbjct: 72 LQQRFNYKEGKLQLFVERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRYVMESGAK 131
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRH 104
GCEV + GK++ QRA SM F+DGYMI SG K ++D+A+RH
Sbjct: 132 GCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDAAIRH 173
>gi|342184715|emb|CCC94197.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 214
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 76/102 (74%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+Q+RF + E ++L+ E+V RGL A+AQAESLR + L+ + + A G++R++MESGAK
Sbjct: 72 LQQRFNYKEGKLQLFVERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRYVMESGAK 131
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRH 104
GCEV + GK++ QRA SM F+DGYMI SG K ++D+A+RH
Sbjct: 132 GCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDAAIRH 173
>gi|154334600|ref|XP_001563547.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060568|emb|CAM42116.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 219
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 75/106 (70%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+Q+RF + E ++LY E+V RGL A+AQ ESLR + L+ + + A G++R++MESGAK
Sbjct: 72 IQQRFNYKEGKLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIRYVMESGAK 131
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
GCEV V GK++ QRA SM F+DGYMI SG K ++DSA RH R
Sbjct: 132 GCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMR 177
>gi|146082044|ref|XP_001464434.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|146097654|ref|XP_001468174.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|157866908|ref|XP_001682009.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|157874873|ref|XP_001685848.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|401418259|ref|XP_003873621.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|401427716|ref|XP_003878341.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|68125460|emb|CAJ03321.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|68128921|emb|CAJ06157.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|134068526|emb|CAM66821.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|134072541|emb|CAM71255.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|322489852|emb|CBZ25113.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494589|emb|CBZ29891.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 219
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 75/106 (70%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+Q+RF + E ++LY E+V RGL A+AQ ESLR + L+ + + A G++R++MESGAK
Sbjct: 72 IQQRFNYKEGKLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIRYVMESGAK 131
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
GCEV V GK++ QRA SM F+DGYMI SG K ++DSA RH R
Sbjct: 132 GCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMR 177
>gi|407409823|gb|EKF32505.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi marinkellei]
Length = 253
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 74/102 (72%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+Q+RF + E ++L+AE+V RGL A+AQAESLR + L+ + + A G++R +MESGAK
Sbjct: 111 LQQRFHYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRHVMESGAK 170
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRH 104
GCEV V GK++ QRA SM F+DGYMI SG K ++D A RH
Sbjct: 171 GCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKNFVDVATRH 212
>gi|340505471|gb|EGR31795.1| hypothetical protein IMG5_102040 [Ichthyophthirius multifiliis]
Length = 676
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 53/108 (49%), Positives = 76/108 (70%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+QKRF + + +++ AE V N+GLCA AQ E+L + L + ++A ++R ++ GAK
Sbjct: 76 LQKRFGYANDQLQILAEPVKNKGLCASAQVEALNYKLLKDVPVRLAANYIIRQVINDGAK 135
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEVI+SGKL+ QRA +MKFK GYMI +G P K+Y+D AVRHV +Q
Sbjct: 136 GCEVIISGKLQQQRAKTMKFKQGYMICTGQPRKDYVDVAVRHVFFKQG 183
>gi|154343872|ref|XP_001567880.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065214|emb|CAM40641.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 219
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 75/106 (70%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+Q+RF + E ++LY E+V RGL A+AQ ESLR + L+ + + A G++R++MESGAK
Sbjct: 72 IQQRFNYKEGKLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIRYVMESGAK 131
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
GCEV V GK++ QRA SM F+DGYMI SG K ++DSA RH R
Sbjct: 132 GCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMR 177
>gi|183398092|gb|ACC62506.1| ribosomal protein S3 (predicted) [Rhinolophus ferrumequinum]
Length = 163
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 65/87 (74%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE+SVELYAEKV R LCAI QAESL + L + + CYGVL+FIMESG
Sbjct: 71 AVVQKRFGFPESSVELYAEKVATRSLCAIGQAESLHHKLLGGLAVRRTCYGVLQFIMESG 130
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYM 87
AKG EV VSGKLR QRA SM F DG M
Sbjct: 131 AKGGEVGVSGKLRGQRAKSMMFVDGLM 157
>gi|398021515|ref|XP_003863920.1| 40S ribosomal protein S3, putative [Leishmania donovani]
gi|322502154|emb|CBZ37237.1| 40S ribosomal protein S3, putative [Leishmania donovani]
Length = 342
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/106 (51%), Positives = 75/106 (70%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+Q+RF + E ++LY E+V RGL A+AQ ESLR + L+ + + A G++R++MESGAK
Sbjct: 195 IQQRFNYKEGKLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIRYVMESGAK 254
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
GCEV V GK++ QRA SM F+DGYMI SG K ++DSA RH R
Sbjct: 255 GCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMR 300
>gi|71408264|ref|XP_806547.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|71653987|ref|XP_815622.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|71656239|ref|XP_816670.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|70870324|gb|EAN84696.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|70880689|gb|EAN93771.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|70881813|gb|EAN94819.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|407844360|gb|EKG01918.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|407849237|gb|EKG04048.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|407867308|gb|EKG08545.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
Length = 214
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 74/102 (72%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+Q+RF + E ++L+AE+V RGL A+AQAESLR + L+ + + A G++R +MESGAK
Sbjct: 72 LQQRFHYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRHVMESGAK 131
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRH 104
GCEV V GK++ QRA SM F+DGYMI SG K ++D A RH
Sbjct: 132 GCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKNFVDVATRH 173
>gi|71406574|ref|XP_805815.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|70869366|gb|EAN83964.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|407405323|gb|EKF30377.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi marinkellei]
Length = 214
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 74/102 (72%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+Q+RF + E ++L+AE+V RGL A+AQAESLR + L+ + + A G++R +MESGAK
Sbjct: 72 LQQRFHYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRHVMESGAK 131
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRH 104
GCEV V GK++ QRA SM F+DGYMI SG K ++D A RH
Sbjct: 132 GCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKNFVDVATRH 173
>gi|444731980|gb|ELW72307.1| Calcium-binding protein 39-like protein [Tupaia chinensis]
Length = 518
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 65/117 (55%), Positives = 77/117 (65%), Gaps = 8/117 (6%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRK---EGLA---VIVCKMACYGVLR 54
+ + KR FPE SVELYAEKV RGLCAIAQAESLR EGLA C AC VL
Sbjct: 174 AVIPKRSGFPEGSVELYAEKVATRGLCAIAQAESLRYRLLEGLAGRRPATC--ACCAVLW 231
Query: 55 FIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQAS 111
F +SGA GCE +VS K R QRA +++F DG +I SG V Y+D+ VRHVL R+ +
Sbjct: 232 FFTDSGATGCEAVVSQKRRGQRAKALRFVDGLVIDSGDRVNYYVDTNVRHVLLRRCA 288
>gi|148684444|gb|EDL16391.1| ribosomal protein S3, isoform CRA_f [Mus musculus]
Length = 168
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/75 (76%), Positives = 62/75 (82%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKGCEVIVSGKLRAQ 75
AKGCEV+VSGKLR Q
Sbjct: 131 AKGCEVVVSGKLRGQ 145
>gi|149391165|gb|ABR25600.1| 40S ribosomal protein S3 [Oryza sativa Indica Group]
Length = 108
Score = 114 bits (285), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/60 (90%), Positives = 55/60 (91%)
Query: 51 GVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GVLRF+MESGAKGCEVIVSGKLRAQRA SMKFKDGYMISSG PV EYIDSAVRHVL RQ
Sbjct: 1 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 60
>gi|167394938|ref|XP_001741154.1| 40S ribosomal protein S3-3 [Entamoeba dispar SAW760]
gi|165894380|gb|EDR22402.1| 40S ribosomal protein S3-3, putative [Entamoeba dispar SAW760]
Length = 250
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 74/106 (69%), Gaps = 6/106 (5%)
Query: 6 RFKFPENSVELYAEKVNNRGLCAIAQAESLR---KEGLAVIVCKMACYGVLRFIMESGAK 62
RF FP++ +ELY EKV RGLC ++QAES++ EGL V + A V+R IMESGAK
Sbjct: 96 RFGFPKDKIELYVEKVLARGLCPVSQAESIKYKIAEGLPV---RRAVGSVMRLIMESGAK 152
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
GCEV +SGKLR QRA M FK+GYMI SG +++ SAVR VL R
Sbjct: 153 GCEVSISGKLRGQRAQGMVFKEGYMIKSGNATRQFYSSAVRCVLLR 198
>gi|167389197|ref|XP_001738857.1| 40S ribosomal protein S3-3 [Entamoeba dispar SAW760]
gi|165897685|gb|EDR24767.1| 40S ribosomal protein S3-3, putative [Entamoeba dispar SAW760]
Length = 244
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 74/106 (69%), Gaps = 6/106 (5%)
Query: 6 RFKFPENSVELYAEKVNNRGLCAIAQAESLR---KEGLAVIVCKMACYGVLRFIMESGAK 62
RF FP++ +ELY EKV RGLC ++QAES++ EGL V + A V+R IMESGAK
Sbjct: 90 RFGFPKDKIELYVEKVLARGLCPVSQAESIKYKIAEGLPV---RRAVGSVMRLIMESGAK 146
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
GCEV +SGKLR QRA M FK+GYMI SG +++ SAVR VL R
Sbjct: 147 GCEVSISGKLRGQRAQGMVFKEGYMIKSGNATRQFYSSAVRCVLLR 192
>gi|229594319|ref|XP_001030083.3| KH domain containing protein [Tetrahymena thermophila]
gi|319443358|pdb|2XZM|C Chain C, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 1
gi|319443393|pdb|2XZN|C Chain C, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 2
gi|225566935|gb|EAR82420.3| KH domain containing protein [Tetrahymena thermophila SB210]
gi|315570297|tpg|DAA33967.1| TPA_exp: 40S ribosomal protein rpS3e [Tetrahymena thermophila]
Length = 243
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 77/108 (71%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+QKRF + ++ ++++AE + +GLCA AQ E++ + L + ++A +++ +++ GAK
Sbjct: 76 LQKRFGYSDDQIQIWAEPIKFKGLCASAQVEAMNYKLLKDVPVRLAANYIIKSVIQDGAK 135
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCE+I+SGKL+ QRA +MKFK GYMI +G P +YID AVRHV +Q
Sbjct: 136 GCEIIISGKLKQQRAKTMKFKQGYMICTGQPKNDYIDVAVRHVFFKQG 183
>gi|67467661|ref|XP_649921.1| 40S ribosomal protein S3 [Entamoeba histolytica HM-1:IMSS]
gi|67484576|ref|XP_657508.1| 40S ribosomal protein S3 [Entamoeba histolytica HM-1:IMSS]
gi|56466448|gb|EAL44535.1| 40S ribosomal protein S3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56474761|gb|EAL52118.1| 40S ribosomal protein S3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449702147|gb|EMD42841.1| 40S ribosomal protein S3 [Entamoeba histolytica KU27]
gi|449710680|gb|EMD49710.1| 40S ribosomal protein S3 [Entamoeba histolytica KU27]
Length = 244
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 74/106 (69%), Gaps = 6/106 (5%)
Query: 6 RFKFPENSVELYAEKVNNRGLCAIAQAESLR---KEGLAVIVCKMACYGVLRFIMESGAK 62
RF FP++ +ELY EKV RGLC ++QAES++ EGL V + A V+R IM+SGAK
Sbjct: 90 RFGFPKDKIELYVEKVLARGLCPVSQAESIKYKIAEGLPV---RRAVGSVMRLIMDSGAK 146
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
GCEV +SGKLR QRA M FK+GYMI SG +++ SAVR VL R
Sbjct: 147 GCEVSISGKLRGQRAQGMVFKEGYMIKSGNATRQFYSSAVRCVLLR 192
>gi|123444699|ref|XP_001311117.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|123456864|ref|XP_001316164.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|123476890|ref|XP_001321615.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|123483338|ref|XP_001324008.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|154413076|ref|XP_001579569.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|154415577|ref|XP_001580813.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|121892915|gb|EAX98187.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121898863|gb|EAY03941.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121904445|gb|EAY09392.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121906883|gb|EAY11785.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121913777|gb|EAY18583.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121915034|gb|EAY19827.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
Length = 216
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 80/109 (73%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+QKR++ E+S+E++ +++ +GL A+ Q ESLR + +A I + A Y ++RF+M++GA+
Sbjct: 74 IQKRWRLKEDSLEIFIDRIQRKGLSALNQLESLRYKLIARIPARRAAYSIIRFVMDAGAR 133
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQAS 111
GCEV +SGKLR RA++ K+K+GYM+ SG K+++ AV H+ +QA+
Sbjct: 134 GCEVAISGKLRGARASTSKYKEGYMVKSGDVTKQFVTQAVGHIPMKQAT 182
>gi|226482852|emb|CAX79393.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482854|emb|CAX79394.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 138
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 64/87 (73%)
Query: 24 RGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFK 83
RGL AIAQAESLR + + + ACYG+LRFIMESGA+G EVIVSGK++ QRA +MKF
Sbjct: 4 RGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKIKGQRAKAMKFC 63
Query: 84 DGYMISSGYPVKEYIDSAVRHVLXRQA 110
DG MI SG PV Y+D AVRHV Q
Sbjct: 64 DGLMIHSGDPVNYYVDKAVRHVQLPQG 90
>gi|89513159|gb|ABD74442.1| ribosomal protein S3 [Anopheles quadrimaculatus]
Length = 111
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 61/76 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF F +VELYAEKV RGLCAIAQAESLR + + + + ACYGVLRFIMESG
Sbjct: 36 AVVQKRFDFAPGTVELYAEKVATRGLCAIAQAESLRCKLIGGLAVRRACYGVLRFIMESG 95
Query: 61 AKGCEVIVSGKLRAQR 76
AKGCEV+VSGKLR QR
Sbjct: 96 AKGCEVVVSGKLRGQR 111
>gi|4680363|gb|AAD27643.1|AF133129_1 ribosomal protein S3 [Meriones unguiculatus]
Length = 128
Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/63 (79%), Positives = 53/63 (84%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLX 107
ACYGVLRFIMESGAKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL
Sbjct: 3 ACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLL 62
Query: 108 RQA 110
RQ
Sbjct: 63 RQG 65
>gi|443917610|gb|ELU38287.1| 40S ribosomal protein S3 [Rhizoctonia solani AG-1 IA]
Length = 592
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 55/65 (84%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHV 105
K ACYGVLRF+MESGAKGCEV+VSGKLRA RA SMKF DG+MI SG P ++++D AVRHV
Sbjct: 446 KSACYGVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHV 505
Query: 106 LXRQA 110
L RQ
Sbjct: 506 LLRQG 510
>gi|256073701|ref|XP_002573167.1| 40S ribosomal protein S3 [Schistosoma mansoni]
gi|360045524|emb|CCD83072.1| putative 40s ribosomal protein S3 [Schistosoma mansoni]
Length = 152
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 72/99 (72%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF F + ++ L+ +K+ RGL AIAQAESLR + + + ACYG+LRFI+ESG
Sbjct: 54 SVLQKRFGFSDCALGLFVDKMIFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIIESG 113
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
A+G VIVSGK++ QRA +MKF +G +I SG PV YID
Sbjct: 114 ARGVGVIVSGKIKDQRAKAMKFCNGLIIHSGDPVNNYID 152
>gi|407844367|gb|EKG01924.1| 40S ribosomal protein S3, putative, partial [Trypanosoma cruzi]
Length = 160
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 67/89 (75%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+Q+RF + E ++L+AE+V RGL A+AQAESLR + L+ + + A G++R +MESGAK
Sbjct: 72 LQQRFHYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRHVMESGAK 131
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSG 91
GCEV V GK++ QRA SM F+DGYMI SG
Sbjct: 132 GCEVTVGGKIKGQRAKSMTFRDGYMIKSG 160
>gi|223942381|gb|ACN25274.1| unknown [Zea mays]
gi|413921203|gb|AFW61135.1| hypothetical protein ZEAMMB73_998294 [Zea mays]
Length = 148
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 55/66 (83%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPEN VELYAEKV NRGLCAIAQAESLR + L + + ACYGVLRF+MESG
Sbjct: 71 SVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESG 130
Query: 61 AKGCEV 66
AKGCEV
Sbjct: 131 AKGCEV 136
>gi|145536261|ref|XP_001453858.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421591|emb|CAK86461.1| unnamed protein product [Paramecium tetraurelia]
Length = 230
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 74/109 (67%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF + + +++L +V ++GLCA AQAESL+ + LA + + A VL+ IM G
Sbjct: 73 SLIQKRFGYAKEALQLIVARVQSKGLCAPAQAESLKTKLLAQVPVRTAANAVLKQIMADG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
A G E I+SGKL QRA SMK++ GY+IS+G P K+ ID AVRH +Q
Sbjct: 133 AIGAECIISGKLGQQRAKSMKYRAGYIISTGQPKKDLIDVAVRHCFFKQ 181
>gi|145541820|ref|XP_001456598.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424410|emb|CAK89201.1| unnamed protein product [Paramecium tetraurelia]
Length = 230
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 74/109 (67%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +QKRF + + +++L +V ++GLCA AQAESL+ + LA + + A VL+ IM G
Sbjct: 73 SLIQKRFGYAKEALQLIVARVQSKGLCAPAQAESLKTKLLAQVPVRTAANAVLKQIMADG 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
A G E I+SGKL QRA SMK++ GY+IS+G P K+ ID AVRH +Q
Sbjct: 133 AIGAECIISGKLGQQRAKSMKYRAGYIISTGQPKKDLIDVAVRHCFFKQ 181
>gi|413917291|gb|AFW57223.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
Length = 196
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 56/68 (82%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF FPEN VELYAEKV NRGLCAIAQAESLR + L + + ACYGVLR++MESG
Sbjct: 71 SVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRYVMESG 130
Query: 61 AKGCEVIV 68
AKGCEV V
Sbjct: 131 AKGCEVSV 138
>gi|308802700|ref|XP_003078663.1| putative ribosomal protein (ISS) [Ostreococcus tauri]
gi|116057116|emb|CAL51543.1| putative ribosomal protein (ISS) [Ostreococcus tauri]
Length = 145
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 61/81 (75%), Gaps = 4/81 (4%)
Query: 35 LRKEGLAVIVC----KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISS 90
R+ L +++ + ACYGVLR+IMESGAKG EV+VSGKLR QRA +MKFKDGYMISS
Sbjct: 16 FRETDLTLVIAFSFVRSACYGVLRYIMESGAKGAEVVVSGKLRGQRAKAMKFKDGYMISS 75
Query: 91 GYPVKEYIDSAVRHVLXRQAS 111
G PV++YI S RH L RQ +
Sbjct: 76 GNPVRDYIVSCTRHALLRQGT 96
>gi|440301734|gb|ELP94120.1| 40S ribosomal protein S3-1, putative [Entamoeba invadens IP1]
Length = 246
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 72/103 (69%)
Query: 6 RFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCE 65
RF F +N +EL+ EKV +RGLC ++QAES++ + + + A V++ IMESGA GCE
Sbjct: 90 RFGFKKNCLELFVEKVASRGLCPVSQAESIKYKIAEGVPVRRAVGSVMKLIMESGALGCE 149
Query: 66 VIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
V++SGKLR QRA M FK+GY+I SG +++ SA+R VL R
Sbjct: 150 VVISGKLRGQRAQHMIFKEGYLIKSGNATRQFYASAIRCVLLR 192
>gi|224034403|gb|ACN36277.1| unknown [Zea mays]
gi|413917293|gb|AFW57225.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
gi|413917294|gb|AFW57226.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
Length = 103
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/54 (90%), Positives = 49/54 (90%)
Query: 57 MESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
MESGAKGCEVIVSGKLRAQRA SMKFKDGYMISSG PV EYIDSAVRHVL RQ
Sbjct: 1 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 54
>gi|315139154|gb|ADT80771.1| ribosomal protein S3 [Heliothis subflexa]
gi|315139156|gb|ADT80772.1| ribosomal protein S3 [Heliothis virescens]
Length = 126
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 52/63 (82%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLX 107
ACYGVLRFIMESGA+GCEV+VSGKLR QRA SMKF DG MI SG P +Y+++A RHVL
Sbjct: 2 ACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLL 61
Query: 108 RQA 110
RQ
Sbjct: 62 RQG 64
>gi|294882949|ref|XP_002769895.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239873720|gb|EER02613.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 157
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 61/80 (76%)
Query: 30 AQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMIS 89
AQAESLR + L + + A YGVLRF+ME+GAKG EV VSGKLRAQRA MKF DGY++S
Sbjct: 1 AQAESLRYKLLGGLPVRRAAYGVLRFVMENGAKGVEVTVSGKLRAQRAKVMKFADGYLLS 60
Query: 90 SGYPVKEYIDSAVRHVLXRQ 109
+G P + Y+D A+R+V RQ
Sbjct: 61 TGTPKEMYVDQAIRNVDMRQ 80
>gi|323303371|gb|EGA57167.1| Rps3p [Saccharomyces cerevisiae FostersB]
Length = 136
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 58/71 (81%), Gaps = 3/71 (4%)
Query: 39 GLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYI 98
GLA+ + A YGV+R++MESGAKGCEV+VSGKLRA RA +MKF DG++I SG PV ++I
Sbjct: 8 GLAI---RRAAYGVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFI 64
Query: 99 DSAVRHVLXRQ 109
D+A RHVL RQ
Sbjct: 65 DTATRHVLMRQ 75
>gi|8247324|emb|CAB92940.1| putative 40S ribosomal protein S3 [Plasmodium falciparum 3D7]
Length = 110
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 58/73 (79%), Gaps = 3/73 (4%)
Query: 38 EGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEY 97
+GLAV + ACYGVLR IMESGAKGCEVIVSGKLRAQRA SMKF+DGY+IS+G P K +
Sbjct: 1 KGLAV---RRACYGVLRHIMESGAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRF 57
Query: 98 IDSAVRHVLXRQA 110
+++A R +Q
Sbjct: 58 VNTATRSAQLKQG 70
>gi|410812263|gb|AFV81473.1| 40S ribosomal protein S3, partial [Scrobicularia plana]
Length = 113
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/59 (76%), Positives = 50/59 (84%)
Query: 52 VLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
VLRFIMESGAKGCEV+VSGKLR QRA SMKF DG MI SG P+ +Y+D+AVRHVL RQ
Sbjct: 1 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPINDYVDTAVRHVLLRQG 59
>gi|410040211|ref|XP_003950757.1| PREDICTED: 40S ribosomal protein S3-A-like [Pan troglodytes]
gi|410040213|ref|XP_003950758.1| PREDICTED: 40S ribosomal protein S3-A-like [Pan troglodytes]
gi|410040215|ref|XP_003950759.1| PREDICTED: 40S ribosomal protein S3-A-like [Pan troglodytes]
Length = 122
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 56/72 (77%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF PE SVELYAEKV RGLCAIAQAESL + L + + ACYG L FIME+G
Sbjct: 51 AVVQKRFGSPEGSVELYAEKVATRGLCAIAQAESLPYKLLGGLAVRRACYGALWFIMETG 110
Query: 61 AKGCEVIVSGKL 72
AKGCEV+VSGKL
Sbjct: 111 AKGCEVVVSGKL 122
>gi|303390809|ref|XP_003073635.1| 40S ribosomal protein S3 [Encephalitozoon intestinalis ATCC 50506]
gi|303302782|gb|ADM12275.1| 40S ribosomal protein S3 [Encephalitozoon intestinalis ATCC 50506]
Length = 227
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 73/108 (67%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
V +R + P+ +VE+ EKV+ +GLCA+ QA +R++ L + + + L+ + SGA+
Sbjct: 83 VAQRLEVPDENVEIIVEKVHEKGLCALIQANFIREKMLGGVQYRRSVNMALKAVRHSGAQ 142
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GC++IVSGKL+ QRA S+KF+DG +I SG PVK+YID+ V +Q
Sbjct: 143 GCQIIVSGKLKGQRAKSVKFQDGVLIHSGNPVKDYIDTGYATVETKQG 190
>gi|403340419|gb|EJY69494.1| 40S ribosomal protein S3 [Oxytricha trifallax]
Length = 243
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 76/114 (66%), Gaps = 4/114 (3%)
Query: 1 SAVQKRFKFPE--NSVELYAEKVN-NRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIM 57
S ++KR+ F + N VEL + + ++ LCA AQAE+L+ + L ++A +L +M
Sbjct: 78 SLIEKRYNFNDVDNKVELAIKPLPYDKNLCAAAQAENLKYKLLGGTPVRLAANNILAQVM 137
Query: 58 E-SGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
+ GAKGCE+I+SGK+R QRA S K+K GY+IS+G P E++D AVRHV RQ
Sbjct: 138 KRGGAKGCEIIISGKIRGQRAKSQKYKQGYIISTGQPKLEFVDEAVRHVELRQG 191
>gi|83595153|gb|ABC25034.1| ribosomal protein S3 [Hydra vulgaris]
Length = 119
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 48/55 (87%)
Query: 56 IMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
I+ESGAKGCEVIVSGKLR QRA SMKF DG+MI SGYP++EYID+AVRHV RQ
Sbjct: 6 ILESGAKGCEVIVSGKLRGQRAKSMKFTDGFMIHSGYPIQEYIDTAVRHVYLRQG 60
>gi|90076128|dbj|BAE87744.1| unnamed protein product [Macaca fascicularis]
gi|90076700|dbj|BAE88030.1| unnamed protein product [Macaca fascicularis]
Length = 147
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 51/63 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + L + + ACYGVLRFIMESG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
Query: 61 AKG 63
AKG
Sbjct: 131 AKG 133
>gi|393905485|gb|EJD73988.1| 40S ribosomal protein S3, variant [Loa loa]
Length = 183
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 55/73 (75%), Gaps = 3/73 (4%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S VQKRF F + +VELYAEKV NRGLCA+AQ ESLR + + + + ACYGVLRFIMES
Sbjct: 74 SVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESN 133
Query: 61 AKGCEVIVSGKLR 73
A+GCE+ GK R
Sbjct: 134 AQGCEI---GKWR 143
>gi|396082067|gb|AFN83679.1| 40S ribosomal protein S3 [Encephalitozoon romaleae SJ-2008]
Length = 216
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 71/108 (65%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
V +R + P+ +VE+ EKV+ +GLCA+ QA +R++ L + + A L+ SGA+
Sbjct: 72 VAQRLEVPDENVEIIVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKATRHSGAQ 131
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GC++IVSGKL+ QRA S+KF+DG +I SG VK+YI++ V +Q
Sbjct: 132 GCQIIVSGKLKGQRAKSVKFQDGVLIHSGNAVKDYINTGYATVETKQG 179
>gi|401828611|ref|XP_003888019.1| 40S ribosomal protein S3 [Encephalitozoon hellem ATCC 50504]
gi|392999027|gb|AFM99038.1| 40S ribosomal protein S3 [Encephalitozoon hellem ATCC 50504]
Length = 216
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 70/108 (64%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
V +R + P+ +VE+ EKV+ +GLCA+ QA +R++ L + + A L+ SGA+
Sbjct: 72 VAQRLEVPDENVEIVVEKVHEKGLCALIQANFIREKMLGGVQYRRAVNMALKATRHSGAQ 131
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GC++IVSGKL+ QRA S+KF+DG +I SG V +YI++ V +Q
Sbjct: 132 GCQIIVSGKLKGQRAKSVKFQDGVLIHSGNAVNDYINTGYATVETKQG 179
>gi|354477339|ref|XP_003500878.1| PREDICTED: 40S ribosomal protein S3-like [Cricetulus griseus]
Length = 152
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 47/59 (79%)
Query: 52 VLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
VLRF MESGA+GCEV+VSGKLR +RA SMK DG MI SG PV Y+D+A+RHVL RQ
Sbjct: 31 VLRFTMESGAEGCEVVVSGKLRGERAKSMKLVDGLMIHSGDPVNYYVDTAIRHVLLRQG 89
>gi|262401161|gb|ACY66483.1| putative 40S ribosomal protein RPS3 [Scylla paramamosain]
Length = 66
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 51/64 (79%), Gaps = 3/64 (4%)
Query: 39 GLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYI 98
GLAV + ACYGVL FIMESGAKGCEV+VSGKLR QRA SMKF DG MI SG P + Y+
Sbjct: 6 GLAV---RRACYGVLCFIMESGAKGCEVVVSGKLRGQRAKSMKFTDGLMIHSGEPRRHYV 62
Query: 99 DSAV 102
D+AV
Sbjct: 63 DAAV 66
>gi|386869506|ref|NP_001247436.1| 40S ribosomal protein S3 isoform 3 [Homo sapiens]
gi|426369805|ref|XP_004051874.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Gorilla gorilla
gorilla]
gi|426369807|ref|XP_004051875.1| PREDICTED: 40S ribosomal protein S3 isoform 2 [Gorilla gorilla
gorilla]
gi|426369811|ref|XP_004051877.1| PREDICTED: 40S ribosomal protein S3 isoform 4 [Gorilla gorilla
gorilla]
gi|426369815|ref|XP_004051879.1| PREDICTED: 40S ribosomal protein S3 isoform 6 [Gorilla gorilla
gorilla]
gi|21104402|dbj|BAB93471.1| IMR-90 ribosomal protein S3 [Homo sapiens]
Length = 117
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 44/54 (81%)
Query: 57 MESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
MESGAKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 54
>gi|149068840|gb|EDM18392.1| rCG40478, isoform CRA_b [Rattus norvegicus]
gi|344246127|gb|EGW02231.1| 40S ribosomal protein S3 [Cricetulus griseus]
Length = 117
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 44/54 (81%)
Query: 57 MESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
MESGAKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 54
>gi|149068842|gb|EDM18394.1| rCG40478, isoform CRA_d [Rattus norvegicus]
Length = 151
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 44/54 (81%)
Query: 57 MESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
MESGAKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 54
>gi|85014361|ref|XP_955676.1| 40S ribosomal protein S3 [Encephalitozoon cuniculi GB-M1]
gi|51701889|sp|Q8SQM3.1|RS3_ENCCU RecName: Full=40S ribosomal protein S3
gi|449330262|gb|AGE96522.1| 40S ribosomal protein S3 [Encephalitozoon cuniculi]
Length = 228
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 69/106 (65%)
Query: 5 KRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGC 64
+R + P+ SVE+ EKV+ +GLCA+ QA +R++ L + + A L+ + A+GC
Sbjct: 86 QRLEVPDESVEIVVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHAKAQGC 145
Query: 65 EVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
++IVSGKL+ QRA S+KF+DG +I SG VK+YI++ V +Q
Sbjct: 146 QIIVSGKLKGQRAKSVKFQDGVLIHSGDAVKDYINTGYATVETKQG 191
>gi|392513001|emb|CAD27095.2| 40S RIBOSOMAL PROTEIN S3 [Encephalitozoon cuniculi GB-M1]
Length = 216
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 69/106 (65%)
Query: 5 KRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGC 64
+R + P+ SVE+ EKV+ +GLCA+ QA +R++ L + + A L+ + A+GC
Sbjct: 74 QRLEVPDESVEIVVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHAKAQGC 133
Query: 65 EVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
++IVSGKL+ QRA S+KF+DG +I SG VK+YI++ V +Q
Sbjct: 134 QIIVSGKLKGQRAKSVKFQDGVLIHSGDAVKDYINTGYATVETKQG 179
>gi|405948172|gb|EKC17931.1| 40S ribosomal protein S3, partial [Crassostrea gigas]
Length = 112
Score = 87.4 bits (215), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 44/53 (83%)
Query: 58 ESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
ESGAKGCEV+VSGKLR QRA SMKF DG MI SG P+ +Y+D+AVRHVL RQ
Sbjct: 1 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPINDYVDTAVRHVLLRQG 53
>gi|238613775|ref|XP_002398529.1| hypothetical protein MPER_00865 [Moniliophthora perniciosa FA553]
gi|215475235|gb|EEB99459.1| hypothetical protein MPER_00865 [Moniliophthora perniciosa FA553]
Length = 100
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 49/60 (81%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKRFKFPENS+ELYAEKV RGL AIAQ ESLR + L + + ACYGVLRF+MESGAK
Sbjct: 26 VQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLNGLAVRRACYGVLRFVMESGAK 85
>gi|149068839|gb|EDM18391.1| rCG40478, isoform CRA_a [Rattus norvegicus]
Length = 55
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 44/54 (81%)
Query: 57 MESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
MESGAKGCEV+VSGKLR QRA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 54
>gi|324105279|gb|ADY18402.1| ribosomal protein rps3 [Glycera tridactyla]
Length = 108
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 43/53 (81%)
Query: 58 ESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
ESGAKGCEV+VSGKLR QRA SMKF DG MI SG P +Y+D+AVRHVL RQ
Sbjct: 1 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTHDYVDTAVRHVLLRQG 53
>gi|253746539|gb|EET01746.1| Ribosomal protein S3 [Giardia intestinalis ATCC 50581]
Length = 217
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%)
Query: 6 RFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCE 65
RF + ++ +K+ RGL A ++LR + + + A Y V+R M +GA GCE
Sbjct: 82 RFMCDPKNFNIWVDKIIKRGLSAEIMVDNLRAKLEEAMPIRRAAYSVIRTAMRAGAAGCE 141
Query: 66 VIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
VIV+GKLRAQRA + KFK+G +IS+G+P + ++ A RH+ RQ
Sbjct: 142 VIVAGKLRAQRARANKFKEGCLISTGHPKRIFLAEATRHIKMRQ 185
>gi|159117007|ref|XP_001708724.1| Ribosomal protein S3 [Giardia lamblia ATCC 50803]
gi|157436837|gb|EDO81050.1| Ribosomal protein S3 [Giardia lamblia ATCC 50803]
gi|308158393|gb|EFO61089.1| Ribosomal protein S3 [Giardia lamblia P15]
Length = 217
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 65/104 (62%)
Query: 6 RFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCE 65
RF + ++ +K+ RGL A ++LR + + + A Y ++R M +GA GCE
Sbjct: 82 RFMCDPKNFNIWVDKIIKRGLSAEIMVDNLRAKLEEAMPIRRAAYSIIRTAMRAGAAGCE 141
Query: 66 VIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
VIV+GKLRAQRA + KFK+G +IS+G+P + ++ A RH+ RQ
Sbjct: 142 VIVAGKLRAQRARANKFKEGCLISTGHPKRIFLAEATRHIKMRQ 185
>gi|242222173|ref|XP_002476815.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
gi|220723885|gb|EED77980.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
Length = 136
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 44/53 (83%)
Query: 57 MESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
MESGAKGCEV+VSGKLRA RA SMKF DG+MI SG P +++D AVRHV+ RQ
Sbjct: 1 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPALDFVDYAVRHVMLRQ 53
>gi|402466373|gb|EJW01879.1| ribosomal protein S3 [Edhazardia aedis USNM 41457]
Length = 227
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 60/110 (54%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S + KR +N V++ E + +GLC QA ++ + L + A Y +R E G
Sbjct: 77 SLIAKRLGMADNDVDILVEMIKKKGLCPFTQAVNIAQRLLVNASVRRAVYSSIRAAKEEG 136
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A+G EVIVSGK + QRA S KF DG MI SG P K+Y+ + V RQ
Sbjct: 137 AQGIEVIVSGKTKGQRARSTKFIDGLMIHSGQPAKDYVKTGFTAVEMRQG 186
>gi|378756656|gb|EHY66680.1| hypothetical protein NERG_00320 [Nematocida sp. 1 ERTm2]
Length = 243
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 65/110 (59%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ +Q RF+ E SV ++ E+V N+ L A QA +R++ A + + A G +R IME G
Sbjct: 80 TLIQMRFRLEEGSVSIFIEQVKNKALNAQIQANQIREKIGASLPVRRAVSGAIRTIMEGG 139
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A G EVI+SGKL+ QRA S K G M SG +K+Y+ + +L +Q
Sbjct: 140 AAGVEVIISGKLKGQRARSYKVVGGIMKHSGDSIKDYVKKGMSSILLKQG 189
>gi|296083751|emb|CBI23740.3| unnamed protein product [Vitis vinifera]
Length = 458
Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/57 (70%), Positives = 46/57 (80%)
Query: 54 RFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
RF+MESG KGCEVI+SGKL Q A S+KFKDGY+I SG VK+YIDS VRHVL +Q
Sbjct: 140 RFVMESGTKGCEVIMSGKLCVQCAKSIKFKDGYLIFSGQLVKDYIDSTVRHVLLKQG 196
Score = 67.8 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 41/55 (74%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRF 55
S VQKRF+F EN+VELYAEK NNR AIAQAESLR + L +V + A YGVL F
Sbjct: 354 SVVQKRFEFLENNVELYAEKFNNRVFYAIAQAESLRFKLLGGLVVRRAGYGVLSF 408
>gi|387594476|gb|EIJ89500.1| hypothetical protein NEQG_00270 [Nematocida parisii ERTm3]
gi|387596684|gb|EIJ94305.1| hypothetical protein NEPG_00972 [Nematocida parisii ERTm1]
Length = 244
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 65/110 (59%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +Q RF+ E SV ++ E+V NR L A QA+ ++++ A + + G +R IME G
Sbjct: 80 SLIQMRFRLEEGSVSIFIEQVKNRALNAQIQADLIKEKLGAGLPVRRVVSGAIRTIMEGG 139
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
A G EVI+SGKL+ QRA S K +G + SG K+Y+ + +L +Q
Sbjct: 140 ASGAEVIISGKLKGQRARSYKVSEGILKHSGNSTKDYVKKGMSSILLKQG 189
>gi|432099483|gb|ELK28641.1| 40S ribosomal protein S3 [Myotis davidii]
Length = 165
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 59/94 (62%), Gaps = 5/94 (5%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGL--CAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
VQKRF E SV+ Y E V +GL CA AQAESL + L + A Y +L+FIMES
Sbjct: 73 VQKRFGNSEGSVDFYDETVATKGLLVCATAQAESLHYKLLGGLAMLWAFYSMLQFIMESR 132
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPV 94
AKGC+V+VS K QRA SMKF +G M G PV
Sbjct: 133 AKGCKVMVSEKHLGQRAKSMKFVNGLM---GDPV 163
>gi|310771967|emb|CBH28921.1| 40S ribosomal protein S3 [Anncaliia algerae]
Length = 216
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 66/108 (61%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+ +RF + VE+ E + N+GLC + QA+ +R + + I + A + ++ I + GA+
Sbjct: 73 LMQRFPLLSSGVEINVEMIKNKGLCPMTQADFIRVKLFSGIPFRRAVHAAMKSIKDGGAQ 132
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GC +I+SGKL+ QRA S+K++ G MI +G K ++ A+ VL +Q
Sbjct: 133 GCVIIISGKLKGQRAKSVKYQQGLMIHTGNDRKLFVKEAISTVLLKQG 180
>gi|440907841|gb|ELR57934.1| 40S ribosomal protein S3 [Bos grunniens mutus]
Length = 158
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Query: 39 GLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYI 98
GL V+ +AC G R ++ K CEV+VSGKL+ QRA SMKF DG MI SG PV Y+
Sbjct: 28 GLTVLGPALACCGSSRRVI----KDCEVVVSGKLQGQRAKSMKFVDGLMIHSGDPVNYYV 83
Query: 99 DSAVRHVLXRQA 110
D+AVRHVL RQ
Sbjct: 84 DTAVRHVLLRQG 95
>gi|158187818|gb|ABW23198.1| ribosomal protein rps3 [Eurythoe complanata]
Length = 105
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/48 (70%), Positives = 38/48 (79%)
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GCEV+VSGKLR QRA SMKF DG MI SG P +Y+D+AVRHVL RQ
Sbjct: 1 GCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVDTAVRHVLLRQG 48
>gi|170055465|ref|XP_001863594.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167875417|gb|EDS38800.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 278
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 40 LAVIVCKMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
L IV K+ + R +ESGAKG EV+VSGKLR QRA SMKF DG +I S P EY D
Sbjct: 112 LTAIVQKL-IRDLRRACLESGAKGSEVVVSGKLRGQRAKSMKFVDGMVIHSRDPCNEYSD 170
Query: 100 SAVRHVLXRQASSIFCGY 117
+A RH+L RQ I +
Sbjct: 171 TATRHILLRQGGKIMLPW 188
>gi|159145672|gb|ABW90373.1| putative ribosomal protein S3 [Sipunculus nudus]
Length = 126
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 41/56 (73%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFI 56
S VQKRF FPE +VELY +KV NRGLCAI Q ESLR + + + ACYGVLRFI
Sbjct: 71 SVVQKRFNFPEGTVELYVQKVANRGLCAITQCESLRYKLIGGLAVTRACYGVLRFI 126
>gi|224121646|ref|XP_002318635.1| predicted protein [Populus trichocarpa]
gi|222859308|gb|EEE96855.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/45 (84%), Positives = 39/45 (86%), Gaps = 3/45 (6%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKE---GLAV 42
S VQKRFKFPEN VELYAEKVNNRGLCAIAQAESLR + GLAV
Sbjct: 71 SVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAV 115
>gi|119598703|gb|EAW78297.1| hCG2022018 [Homo sapiens]
Length = 117
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 40/54 (74%)
Query: 57 MESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
MESGAKGC+V+ SGKLR QRA SMKF DG I SG P+ Y+ +AV HVL RQ
Sbjct: 1 MESGAKGCKVMASGKLRGQRAKSMKFVDGLTIHSGDPINYYVGTAVCHVLLRQG 54
>gi|300708361|ref|XP_002996361.1| hypothetical protein NCER_100555 [Nosema ceranae BRL01]
gi|239605657|gb|EEQ82690.1| hypothetical protein NCER_100555 [Nosema ceranae BRL01]
Length = 214
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 62/108 (57%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
V R P+++V + +KV +GLC + QA +R++ LA I K A VL+ +GA
Sbjct: 72 VASRLSLPDSNVVVIIDKVVEKGLCPVYQANLIREKMLANIPHKRAANLVLKNTKFAGAT 131
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GC V +SGKL+ RA + KF +G +I SG P ++Y+ + V +Q
Sbjct: 132 GCLVTISGKLKGLRACTKKFLEGVVIKSGQPSRDYVKKHITTVNTKQG 179
>gi|226476716|emb|CAX72250.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 102
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 40/54 (74%)
Query: 57 MESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
MESGA+G EVIVSGK++ QRA +MKF DG MI SG PV Y+D AVRHV Q
Sbjct: 1 MESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQG 54
>gi|224154183|ref|XP_002337443.1| predicted protein [Populus trichocarpa]
gi|222839282|gb|EEE77619.1| predicted protein [Populus trichocarpa]
Length = 73
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/45 (84%), Positives = 39/45 (86%), Gaps = 3/45 (6%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKE---GLAV 42
S VQKRFKFPEN VELYAEKVNNRGLCAIAQAESLR + GLAV
Sbjct: 11 SVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAV 55
>gi|395833096|ref|XP_003789581.1| PREDICTED: 40S ribosomal protein S3-like isoform 1 [Otolemur
garnettii]
gi|395833098|ref|XP_003789582.1| PREDICTED: 40S ribosomal protein S3-like isoform 2 [Otolemur
garnettii]
Length = 123
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 40/53 (75%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVL 53
+ VQKRF FPE SVELYAEK RGLCAIAQAESLR + L + + ACYGVL
Sbjct: 71 AVVQKRFGFPEGSVELYAEKGATRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
>gi|379994267|gb|AFD22760.1| 40S ribosomal protein S3, partial [Collodictyon triciliatum]
Length = 100
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/43 (74%), Positives = 35/43 (81%)
Query: 68 VSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
VSGKLRAQRA MKF+DGYMI SG P K Y+DSAVRHV+ RQ
Sbjct: 4 VSGKLRAQRAKVMKFRDGYMIKSGNPTKVYVDSAVRHVMMRQG 46
>gi|237861296|gb|ACR24221.1| 40S ribosomal protein S3 [Nosema bombycis]
gi|326562626|gb|ADZ95643.1| 40S ribosomal protein S3 [Nosema bombycis]
Length = 214
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%)
Query: 6 RFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCE 65
R PE ++ + +KV +GLC + QA ++++ LA + K A VLR +GA GC
Sbjct: 75 RLNVPEMNINIIIDKVVEKGLCPVFQANLIKEKMLAGVQYKRAANLVLRNTKFAGATGCL 134
Query: 66 VIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
+ +SGKL+ RA + KF +G +I SG P K+Y+ V +Q
Sbjct: 135 ITISGKLKGLRACTKKFLEGVVIKSGQPSKDYVKKYTTTVNTKQG 179
>gi|440493994|gb|ELQ76410.1| 40S ribosomal protein S3 [Trachipleistophora hominis]
Length = 214
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 62/113 (54%), Gaps = 9/113 (7%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRK---EGLAVIVCKMACYGVLRFIM 57
S V+KR K V + E V ++GLC QAE +RK EGLA + A G LR I
Sbjct: 73 SLVKKRLK---KDVTILVEMVKDKGLCPNVQAEYIRKKMSEGLA---YRRAVNGALRTIK 126
Query: 58 ESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
E+GA+GC ++VSGKL+ QRA S K I SG P +EY+ V +Q
Sbjct: 127 EAGAQGCIIVVSGKLKGQRARSQKMMWQTNIYSGSPKEEYMRGGKSTVHLKQG 179
>gi|22759729|dbj|BAC10913.1| putative ribosomal protein S3 [Zinnia elegans]
Length = 143
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/37 (86%), Positives = 33/37 (89%)
Query: 74 AQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
AQRA SMKFKDGYM+SSG PVKEYIDSAVRHVL RQ
Sbjct: 1 AQRAKSMKFKDGYMVSSGQPVKEYIDSAVRHVLLRQG 37
>gi|432092120|gb|ELK24807.1| 40S ribosomal protein S3 [Myotis davidii]
Length = 133
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 39/54 (72%)
Query: 57 MESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
ME GA GCEV+VSGKL+ QRA S+K DG MI SG PV Y+D+AV H L R+
Sbjct: 1 MERGADGCEVVVSGKLQGQRAASVKVVDGLMIRSGDPVNCYVDTAVHHGLPRRG 54
>gi|429965063|gb|ELA47060.1| ribosomal protein S3 [Vavraia culicis 'floridensis']
Length = 214
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S V+KR V + E V ++GLC QAE +RK+ + + A G LR I E+G
Sbjct: 73 SLVKKRLN---KDVTILVEMVKDKGLCPNVQAEYIRKKMSEGLTYRRAVNGALRTIKEAG 129
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYI 98
A+GC +IVSGKL+ QRA S K I SG P +EY+
Sbjct: 130 AQGCIIIVSGKLKGQRARSQKMMWQTNIYSGSPKEEYM 167
>gi|384494103|gb|EIE84594.1| 40S ribosomal protein [Rhizopus delemar RA 99-880]
Length = 131
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 40/50 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACY 50
+ VQKRFKFPEN+VELYAE+V NRGLCAIAQ ES++ + L + C + CY
Sbjct: 71 TLVQKRFKFPENAVELYAERVQNRGLCAIAQCESVKFKLLNGLACLLRCY 120
>gi|170060068|ref|XP_001865639.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
gi|167878646|gb|EDS42029.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
Length = 179
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/47 (74%), Positives = 36/47 (76%)
Query: 50 YGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKE 96
YGVLRFIMES AKG EV+VSGKLR QRA SM F DG MI S P KE
Sbjct: 77 YGVLRFIMESCAKGYEVVVSGKLRGQRAKSMTFVDGMMIHSDDPCKE 123
>gi|429961737|gb|ELA41282.1| hypothetical protein VICG_01655 [Vittaforma corneae ATCC 50505]
Length = 215
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 57/99 (57%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+ +RF P N++++ EK+ +RGL AE LR L K +++ +GA+
Sbjct: 71 IGQRFDIPPNNIDIVFEKIADRGLEPAYHAEQLRLAFLQNKPYKRVINSIIKSSRAAGAQ 130
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
G + V+GKL+ QRA ++K+ DGY I SG K+Y+ SA
Sbjct: 131 GVMIRVAGKLKGQRAKAIKYFDGYFIQSGMAAKDYVRSA 169
>gi|223947579|gb|ACN27873.1| unknown [Zea mays]
gi|413917292|gb|AFW57224.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
Length = 127
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/45 (80%), Positives = 37/45 (82%), Gaps = 3/45 (6%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKE---GLAV 42
S VQKRF FPEN VELYAEKV NRGLCAIAQAESLR + GLAV
Sbjct: 71 SVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAV 115
>gi|226508400|ref|NP_001142180.1| uncharacterized protein LOC100274348 [Zea mays]
gi|194707500|gb|ACF87834.1| unknown [Zea mays]
gi|413921204|gb|AFW61136.1| hypothetical protein ZEAMMB73_998294 [Zea mays]
Length = 133
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/45 (80%), Positives = 37/45 (82%), Gaps = 3/45 (6%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKE---GLAV 42
S VQKRF FPEN VELYAEKV NRGLCAIAQAESLR + GLAV
Sbjct: 71 SVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAV 115
>gi|222064015|emb|CAQ86670.1| putative ribosomal protein S3 [Histomonas meleagridis]
Length = 89
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 43/54 (79%)
Query: 57 MESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
M++GA+GCEV++SGK+R+ RA +MKF++GYM+ SG ++Y+ AV H+ +QA
Sbjct: 1 MDAGARGCEVVISGKMRSARAAAMKFREGYMVKSGDVSQKYVLKAVGHIPMKQA 54
>gi|149391843|gb|ABR25845.1| 40S ribosomal protein S3-a [Oryza sativa Indica Group]
Length = 85
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/33 (87%), Positives = 29/33 (87%)
Query: 77 ATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
A SMKFKDGYMISSGYPV YIDSAVRHVL RQ
Sbjct: 1 AKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQ 33
>gi|149068846|gb|EDM18398.1| rCG40478, isoform CRA_h [Rattus norvegicus]
Length = 151
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 3/45 (6%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKE---GLAV 42
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + GLAV
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAV 115
>gi|326914668|ref|XP_003203646.1| PREDICTED: 40S ribosomal protein S3-like, partial [Meleagris
gallopavo]
Length = 63
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 36/45 (80%), Gaps = 3/45 (6%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKE---GLAV 42
+ VQKRF FPE SVELYAEKV RGLCAIAQAESLR + GLAV
Sbjct: 17 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAV 61
>gi|440906791|gb|ELR57014.1| 40S ribosomal protein S3 [Bos grunniens mutus]
Length = 220
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 49/107 (45%), Gaps = 27/107 (25%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
VQKR FPE +V LYAEKV LCAI QAESL + A YG LRFIM G K
Sbjct: 74 VQKRCGFPECTVALYAEKVATGNLCAIVQAESLHYRLPGGLTVPRAYYGELRFIM--GPK 131
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
S PV Y+D++ RHVL RQ
Sbjct: 132 AV-------------------------SEDPVNYYVDTSARHVLLRQ 153
>gi|302142415|emb|CBI19618.3| unnamed protein product [Vitis vinifera]
Length = 576
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/33 (84%), Positives = 30/33 (90%)
Query: 74 AQRATSMKFKDGYMISSGYPVKEYIDSAVRHVL 106
AQRA SMKFKDGY+ISSG PVK+YID AVRHVL
Sbjct: 77 AQRAKSMKFKDGYLISSGQPVKDYIDLAVRHVL 109
>gi|308802702|ref|XP_003078664.1| Putative 40S ribosomal protein; contains C-terminal domain (ISS)
[Ostreococcus tauri]
gi|116057117|emb|CAL51544.1| Putative 40S ribosomal protein; contains C-terminal domain (ISS)
[Ostreococcus tauri]
Length = 120
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 36/45 (80%), Gaps = 3/45 (6%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKE---GLAV 42
+ VQ+RF F E +VELYAEKVNNRGLCAIAQ ESLR + GLAV
Sbjct: 71 TLVQRRFGFAEGTVELYAEKVNNRGLCAIAQCESLRYKLLGGLAV 115
>gi|195650699|gb|ACG44817.1| hypothetical protein [Zea mays]
gi|413917295|gb|AFW57227.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
Length = 80
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/31 (87%), Positives = 27/31 (87%)
Query: 80 MKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
MKFKDGYMISSG PV EYIDSAVRHVL RQ
Sbjct: 1 MKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 31
>gi|395539389|ref|XP_003771653.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3-like
[Sarcophilus harrisii]
Length = 361
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/102 (44%), Positives = 54/102 (52%), Gaps = 25/102 (24%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ V ++F FPE+ N LC GLAV C+ AC G E G
Sbjct: 62 TPVVQKFGFPES---------NATSLCYKLLG------GLAV--CR-ACCG------EWG 97
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAV 102
KGCE+++SGKLR QRA SMKF D MI SG P+ YID AV
Sbjct: 98 -KGCEMVMSGKLRGQRAKSMKFVDVLMIQSGDPLNHYIDIAV 138
>gi|269861307|ref|XP_002650365.1| SSU ribosomal protein S3P [Enterocytozoon bieneusi H348]
gi|220066196|gb|EED43690.1| SSU ribosomal protein S3P [Enterocytozoon bieneusi H348]
Length = 214
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ + +R + + EK+ ++ L AE LR+ + V K ++R + ++G
Sbjct: 69 NMIAQRLNMIPEHIRIVFEKIIDKALEPAYHAELLRQAFINVQPYKRTINSIIRSVRQAG 128
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
+G + VSGK++ QRA + KF DG +I +G P KEYI A
Sbjct: 129 GQGVCIRVSGKIKGQRAKATKFIDGLLIQAGQPAKEYIRKA 169
>gi|452210667|ref|YP_007490781.1| SSU ribosomal protein S3e (S3p) [Methanosarcina mazei Tuc01]
gi|452100569|gb|AGF97509.1| SSU ribosomal protein S3e (S3p) [Methanosarcina mazei Tuc01]
Length = 307
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 15 ELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKLRA 74
EL A+ + +R +I + RK G + +R +M +GA GCEV++SGKL
Sbjct: 89 ELNAQMMASRLAASIERGWYFRKAG----------HNTIRAVMNAGALGCEVVISGKLTG 138
Query: 75 QRATSMKFKDGYMISSGYPVKEYIDSA 101
R+ KF DGY+ SG+PV+E +D
Sbjct: 139 ARSRVEKFVDGYIKHSGHPVEEVVDEG 165
>gi|21228232|ref|NP_634154.1| 30S ribosomal protein S3 [Methanosarcina mazei Go1]
gi|27734502|sp|Q8PV44.1|RS3_METMA RecName: Full=30S ribosomal protein S3
gi|20906688|gb|AAM31826.1| SSU ribosomal protein S3P [Methanosarcina mazei Go1]
Length = 307
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 15 ELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKLRA 74
EL A+ + +R +I + RK G + +R +M +GA GCEV++SGKL
Sbjct: 89 ELNAQMMASRLAASIERGWYFRKAG----------HNTIRAVMNAGALGCEVVISGKLTG 138
Query: 75 QRATSMKFKDGYMISSGYPVKEYIDSA 101
R+ KF DGY+ SG+PV+E +D
Sbjct: 139 ARSRVEKFVDGYIKHSGHPVEEVVDEG 165
>gi|88603493|ref|YP_503671.1| 30S ribosomal protein S3 [Methanospirillum hungatei JF-1]
gi|121731027|sp|Q2FT39.1|RS3_METHJ RecName: Full=30S ribosomal protein S3
gi|88188955|gb|ABD41952.1| SSU ribosomal protein S3P [Methanospirillum hungatei JF-1]
Length = 237
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%)
Query: 13 SVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKL 72
S ++ ++V+N L A AE L + A LR IM+SGA GCEV++SGKL
Sbjct: 77 SPQIEVQQVDNPNLNAQIMAERLASALERGWYFRKAGSSTLRRIMDSGALGCEVVISGKL 136
Query: 73 RAQRATSMKFKDGYMISSGYPVKEYID 99
R KF +GY+ SG PV +D
Sbjct: 137 TGARGRVQKFTEGYIKHSGDPVNTLVD 163
>gi|20089948|ref|NP_616023.1| 30S ribosomal protein S3 [Methanosarcina acetivorans C2A]
gi|27734505|sp|Q8TRU1.1|RS3_METAC RecName: Full=30S ribosomal protein S3
gi|19914909|gb|AAM04503.1| ribosomal protein S3p [Methanosarcina acetivorans C2A]
Length = 318
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 15 ELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKLRA 74
EL A+ + +R +I + RK G + LR +M +GA GCEV++SGKL
Sbjct: 89 ELNAQMMASRLAASIERGWYFRKAG----------HNTLRAVMNAGALGCEVVISGKLTG 138
Query: 75 QRATSMKFKDGYMISSGYPVKEYIDSA 101
R+ KF DGY+ SG PV+E +D
Sbjct: 139 ARSRVEKFVDGYIKHSGNPVEEVVDEG 165
>gi|152060913|sp|A1RXG6.2|RS3_THEPD RecName: Full=30S ribosomal protein S3
Length = 202
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 53 LRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
L IM +GA+G E+++SGKL +QR + KF GY+ SG P +E +D A+ HVL +
Sbjct: 118 LNRIMAAGARGAEIVISGKLTSQRHRTEKFTRGYVPKSGEPGEELVDEAIVHVLLK 173
>gi|119719404|ref|YP_919899.1| ribosomal protein S3 [Thermofilum pendens Hrk 5]
gi|119524524|gb|ABL77896.1| SSU ribosomal protein S3P [Thermofilum pendens Hrk 5]
Length = 187
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 53 LRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
L IM +GA+G E+++SGKL +QR + KF GY+ SG P +E +D A+ HVL +
Sbjct: 103 LNRIMAAGARGAEIVISGKLTSQRHRTEKFTRGYVPKSGEPGEELVDEAIVHVLLK 158
>gi|73667656|ref|YP_303671.1| 30S ribosomal protein S3 [Methanosarcina barkeri str. Fusaro]
gi|91207819|sp|Q46GA1.1|RS3_METBF RecName: Full=30S ribosomal protein S3
gi|72394818|gb|AAZ69091.1| SSU ribosomal protein S3P [Methanosarcina barkeri str. Fusaro]
Length = 311
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 15 ELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKLRA 74
EL A+ + +R +I + RK G + LR +M +GA GCEV++SGKL
Sbjct: 89 ELNAQMMASRLAASIERGWYFRKAG----------HNTLRAVMNAGALGCEVVISGKLTG 138
Query: 75 QRATSMKFKDGYMISSGYPVKEYIDS 100
R+ KF DGY+ SG PV E +D
Sbjct: 139 ARSRVEKFVDGYIKHSGNPVDEVVDE 164
>gi|32400841|gb|AAP80652.1|AF479033_1 40S ribosomal protein [Triticum aestivum]
Length = 79
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/31 (80%), Positives = 27/31 (87%)
Query: 80 MKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
+KFKDGYMISSG PV EYID+AVRHVL RQ
Sbjct: 2 VKFKDGYMISSGQPVNEYIDAAVRHVLLRQG 32
>gi|312137081|ref|YP_004004418.1| 30S ribosomal protein S3 [Methanothermus fervidus DSM 2088]
gi|311224800|gb|ADP77656.1| SSU ribosomal protein S3P [Methanothermus fervidus DSM 2088]
Length = 217
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 37/53 (69%)
Query: 49 CYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
YG LR IM +GA+G E+ +SGK+R RATS+KF +G++ G P ++++ +
Sbjct: 112 AYGTLRRIMAAGAQGAEITISGKIRGARATSVKFTEGHIKKCGEPAEKFVKTG 164
>gi|218117273|emb|CAQ37764.1| 40S ribosomal protein S3 [Echinorhynchus truttae]
Length = 71
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIM 57
S V KRF + L + KV RGLCA+ QAESLR + + + + ACYGV+RF+M
Sbjct: 15 SVVAKRFNLKPEKLVLLSSKVEQRGLCAMTQAESLRYKLIEGVAVRRACYGVVRFVM 71
>gi|386001179|ref|YP_005919478.1| 30S ribosomal protein S3 [Methanosaeta harundinacea 6Ac]
gi|357209235|gb|AET63855.1| 30S ribosomal protein S3P [Methanosaeta harundinacea 6Ac]
Length = 302
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 15 ELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKLRA 74
EL A+ V NR ++ + RK G LR +MESGA GCE+I+SGKL
Sbjct: 89 ELNAQVVANRLASSLERGWYFRKAGQTT----------LRRVMESGALGCEIILSGKLTG 138
Query: 75 QRATSMKFKDGYMISSGYPVKEYID 99
R+ KF GY+ SG P +E +D
Sbjct: 139 PRSRVEKFLSGYVKHSGKPSQEIVD 163
>gi|410039268|ref|XP_003950581.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3-like [Pan
troglodytes]
Length = 238
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMES- 59
+ VQKR PE SVEL+A KV RG+C A ES + L + + AC GVL FI
Sbjct: 71 AVVQKRSGXPEGSVELFAGKVATRGMCVFAXVES-QCYLLGGLAAQRACCGVLWFIRRGX 129
Query: 60 GAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
GA G + +VS + + KF D MI S V ID+A+ VL +Q
Sbjct: 130 GATGFKAVVS-----ENSKCRKFVDDLMILSRNSVY-LIDTAMCQVLLQQG 174
>gi|397780850|ref|YP_006545323.1| 30S ribosomal protein S3P [Methanoculleus bourgensis MS2]
gi|396939352|emb|CCJ36607.1| 30S ribosomal protein S3P [Methanoculleus bourgensis MS2]
Length = 234
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 14/90 (15%)
Query: 10 PENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVS 69
P S ++ AE++ N A+ + RK G + I R +MESGA GCEVIV+
Sbjct: 88 PNFSAQIMAERLAN----ALERGWYFRKAGQSTI----------RRVMESGALGCEVIVA 133
Query: 70 GKLRAQRATSMKFKDGYMISSGYPVKEYID 99
GKL R+ + KF +GY+ SG P + ++
Sbjct: 134 GKLTGARSRTQKFTEGYVKHSGEPSETIVE 163
>gi|374630584|ref|ZP_09702969.1| SSU ribosomal protein S3P [Methanoplanus limicola DSM 2279]
gi|373908697|gb|EHQ36801.1| SSU ribosomal protein S3P [Methanoplanus limicola DSM 2279]
Length = 242
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%)
Query: 12 NSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGK 71
S ++ ++V N A AE L + A ++R IMESGA GCEV+VSGK
Sbjct: 76 ESPQIEVQQVENPSFNAQIMAERLANSLERGWYFRKAGSSIMRRIMESGALGCEVVVSGK 135
Query: 72 LRAQRATSMKFKDGYMISSGYPVKEYID 99
L RA KF +GY+ +G P + ++
Sbjct: 136 LTGSRARVQKFTEGYIKHAGEPSETIVE 163
>gi|347524202|ref|YP_004781772.1| 30S ribosomal protein S3 [Pyrolobus fumarii 1A]
gi|343461084|gb|AEM39520.1| ribosomal protein S3 [Pyrolobus fumarii 1A]
Length = 242
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 40 LAVIVCKMACYG-----VLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPV 94
+AV++ + A Y +LR I+ +GA G E+++SGKLR +RA K + G + S+GY V
Sbjct: 100 IAVLLERGAHYRRVANVMLRRILAAGAIGAEIVISGKLRTERARYEKLRAGKVYSTGYQV 159
Query: 95 KEYIDSAVRHVLXR 108
+ +D AV HVL +
Sbjct: 160 EYMVDRAVMHVLLK 173
>gi|296242591|ref|YP_003650078.1| 30S ribosomal protein S3 [Thermosphaera aggregans DSM 11486]
gi|296095175|gb|ADG91126.1| SSU ribosomal protein S3P [Thermosphaera aggregans DSM 11486]
Length = 229
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 1 SAVQKRFKFPEN---SVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIM 57
+ +Q RF EN +V + N + A +L KE I + G+L+ IM
Sbjct: 70 TILQTRFGL-ENVNITVSPVMDPDLNARVVAFRIVRALEKE----IPFRRVMMGMLKRIM 124
Query: 58 ESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
++GA G E+I+SGKLR +RAT K + G + +G PV+ ID AV L +
Sbjct: 125 DAGAVGAEIIISGKLRGERATYEKMRVGKIYKAGEPVEYIIDRAVARALLK 175
>gi|116755010|ref|YP_844128.1| 30S ribosomal protein S3P [Methanosaeta thermophila PT]
gi|121694870|sp|A0B9W4.1|RS3_METTP RecName: Full=30S ribosomal protein S3
gi|116666461|gb|ABK15488.1| SSU ribosomal protein S3P [Methanosaeta thermophila PT]
Length = 276
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 18/107 (16%)
Query: 3 VQKRFKF--PENSV------ELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLR 54
+++RF+ P+ V +L A V NR ++ RK G ++ LR
Sbjct: 69 LERRFRLDNPQIDVQDVGKSDLNARVVANRLASSLEHGWYFRKAGQSM----------LR 118
Query: 55 FIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
+M+SGA GCE+++SGKL R+ KF GY+ SG P +E +D+
Sbjct: 119 RVMDSGALGCEIVISGKLTGPRSRVEKFLAGYIKHSGKPAEEIVDTG 165
>gi|432332005|ref|YP_007250148.1| ribosomal protein S3, eukaryotic/archaeal type [Methanoregula
formicicum SMSP]
gi|432138714|gb|AGB03641.1| ribosomal protein S3, eukaryotic/archaeal type [Methanoregula
formicicum SMSP]
Length = 231
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%)
Query: 13 SVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKL 72
S ++ ++VNN A AE L + A +LR +M+SGA GCEV+++GKL
Sbjct: 77 SPQIEVQQVNNPSFNAQIMAERLANALERGWYFRKAGTSILRRVMDSGALGCEVVIAGKL 136
Query: 73 RAQRATSMKFKDGYMISSGYP 93
RA + KF +GY+ G P
Sbjct: 137 TGARARTQKFTEGYIKHCGEP 157
>gi|68010962|ref|XP_670951.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56486681|emb|CAI03517.1| hypothetical protein PB301211.00.0 [Plasmodium berghei]
Length = 82
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 70 GKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
GKLRAQRA SMKF+DG++IS+G P K ++++A R Q
Sbjct: 1 GKLRAQRAKSMKFRDGHLISTGEPSKRFVNTATRSAQLNQ 40
>gi|57641471|ref|YP_183949.1| 30S ribosomal protein S3 [Thermococcus kodakarensis KOD1]
gi|73918002|sp|Q5JDH5.1|RS3_PYRKO RecName: Full=30S ribosomal protein S3
gi|57159795|dbj|BAD85725.1| SSU ribosomal protein S3P [Thermococcus kodakarensis KOD1]
Length = 209
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
++K+F +E+ E++ N L A QA L + I + A Y +R IM +GA+
Sbjct: 69 LEKQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIMRNGAR 126
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYI 98
G E+ +SGKL +RA S++F GY+ G P + +
Sbjct: 127 GVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLV 162
>gi|289597187|ref|YP_003483883.1| 30S ribosomal protein S3 [Aciduliprofundum boonei T469]
gi|289534974|gb|ADD09321.1| ribosomal protein S3 [Aciduliprofundum boonei T469]
Length = 237
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVK 95
A + LR IME+GAKG ++I+SGKL RA + KF DG + +G PV+
Sbjct: 111 AGHSTLRRIMEAGAKGAQIIISGKLTGDRARTEKFMDGTIKYNGKPVE 158
>gi|355571377|ref|ZP_09042629.1| ribosomal protein S3 [Methanolinea tarda NOBI-1]
gi|354825765|gb|EHF09987.1| ribosomal protein S3 [Methanolinea tarda NOBI-1]
Length = 239
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 9 FPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIV 68
F S ++ ++V N A AE L + A ++R +M++GA GCEVI+
Sbjct: 73 FAVESPQIEVQQVPNPNFNAQIMAERLANALERGWYFRKAGQSIIRRVMDAGALGCEVII 132
Query: 69 SGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+GKL RA KF +GY+ SG PV ++
Sbjct: 133 AGKLTGARARVQKFTEGYIKHSGEPVNTIVE 163
>gi|65051|emb|CAA24702.1| ribosomal protein S1 [Xenopus laevis]
Length = 125
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 26/35 (74%)
Query: 76 RATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
RA SMKF DG MI SG PV Y+D+AVRHVL RQ
Sbjct: 19 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 53
>gi|124484916|ref|YP_001029532.1| 30S ribosomal protein S3P [Methanocorpusculum labreanum Z]
gi|152060873|sp|A2SPK9.1|RS3_METLZ RecName: Full=30S ribosomal protein S3
gi|124362457|gb|ABN06265.1| SSU ribosomal protein S3P [Methanocorpusculum labreanum Z]
Length = 231
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 14/90 (15%)
Query: 10 PENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVS 69
P + ++ AE++ N A+ + RK G +VI R +M+SGA GCEVI++
Sbjct: 88 PNLNAQIMAERLAN----ALERGWYFRKAGTSVI----------RRVMDSGALGCEVIIA 133
Query: 70 GKLRAQRATSMKFKDGYMISSGYPVKEYID 99
GKL RA KF +GY+ SG P + ++
Sbjct: 134 GKLTGARARVQKFVEGYIKHSGEPSESIVE 163
>gi|341582057|ref|YP_004762549.1| 30S ribosomal protein S3P [Thermococcus sp. 4557]
gi|340809715|gb|AEK72872.1| 30S ribosomal protein S3P [Thermococcus sp. 4557]
Length = 210
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
++++F +E+ E++ N L A QA L + + + A Y +R IM +GA+
Sbjct: 69 LERKFNLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGVHFRRAAYSAIRAIMRNGAR 126
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYI 98
G E+ +SGKL +RA S++F GY+ G P + +
Sbjct: 127 GVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLV 162
>gi|307354329|ref|YP_003895380.1| 30S ribosomal protein S3 [Methanoplanus petrolearius DSM 11571]
gi|307157562|gb|ADN36942.1| ribosomal protein S3 [Methanoplanus petrolearius DSM 11571]
Length = 241
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%)
Query: 12 NSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGK 71
S ++ ++V N A AE L + A ++R IMESGA GCEV++SGK
Sbjct: 76 ESPQIEVQQVENPAFNAQIMAERLANSLERGWYFRKAGTSIIRRIMESGALGCEVVISGK 135
Query: 72 LRAQRATSMKFKDGYMISSGYPVKEYID 99
L R+ KF +GY+ +G P + ++
Sbjct: 136 LTGARSRVQKFTEGYIKHAGEPSETIVE 163
>gi|223477921|ref|YP_002582383.1| 30S ribosomal protein S3e (S3p) [Thermococcus sp. AM4]
gi|214033147|gb|EEB73975.1| SSU ribosomal protein S3e (S3p) [Thermococcus sp. AM4]
Length = 209
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
++++F +E+ E++ N L A QA L + I + A Y +R IM +GA+
Sbjct: 69 LERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIMRNGAR 126
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
G E+ +SGKL +RA S++F GY+ G P + + L +
Sbjct: 127 GVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLK 172
>gi|240104054|ref|YP_002960363.1| 30S ribosomal protein S3P [Thermococcus gammatolerans EJ3]
gi|259495259|sp|C5A280.1|RS3_THEGJ RecName: Full=30S ribosomal protein S3
gi|239911608|gb|ACS34499.1| SSU ribosomal protein S3P (rps3P) [Thermococcus gammatolerans EJ3]
Length = 209
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
++++F +E+ E++ N L A QA L + I + A Y +R IM +GA+
Sbjct: 69 LERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIMRNGAR 126
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
G E+ +SGKL +RA S++F GY+ G P + + L +
Sbjct: 127 GVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLK 172
>gi|219851113|ref|YP_002465545.1| 30S ribosomal protein S3 [Methanosphaerula palustris E1-9c]
gi|219545372|gb|ACL15822.1| ribosomal protein S3 [Methanosphaerula palustris E1-9c]
Length = 234
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 43/82 (52%)
Query: 12 NSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGK 71
S ++ ++V N A AE L + A V+R +MESGA GCEV++SGK
Sbjct: 76 ESPQIEVQQVQNPNYNAQIMAERLANALERGWYFRKAGSNVVRRVMESGALGCEVVLSGK 135
Query: 72 LRAQRATSMKFKDGYMISSGYP 93
L RA KF +GY+ SG P
Sbjct: 136 LTGARARVQKFTEGYIKHSGEP 157
>gi|444729886|gb|ELW70289.1| 40S ribosomal protein S3-A [Tupaia chinensis]
Length = 174
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 27/35 (77%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESL 35
+ +QKRF FPE SVELYAEKV R L AI QAESL
Sbjct: 140 AVIQKRFGFPEGSVELYAEKVATRSLFAIVQAESL 174
>gi|320101360|ref|YP_004176952.1| 30S ribosomal protein S3 [Desulfurococcus mucosus DSM 2162]
gi|319753712|gb|ADV65470.1| SSU ribosomal protein S3P [Desulfurococcus mucosus DSM 2162]
Length = 222
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 52 VLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
+L+ +M++GA G E+IVSGKLR +RAT K K G + +G PV+ +D AV L +
Sbjct: 119 MLKRVMDAGAVGAEIIVSGKLRGERATYEKLKAGKVYKAGEPVEYVVDRAVAKALLKPG 177
>gi|167043045|gb|ABZ07757.1| putative ribosomal protein S3, C-terminal domain protein
[uncultured marine microorganism HF4000_ANIW141A21]
Length = 214
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHV 105
A + IM SGA G E+I++GKLR++R+ + K+KDG + +GYP + AV V
Sbjct: 106 AAMWTVNAIMRSGALGAEIIIAGKLRSERSHTEKYKDGVVPKTGYPATLTVREAVSDV 163
>gi|288931516|ref|YP_003435576.1| 30S ribosomal protein S3 [Ferroglobus placidus DSM 10642]
gi|288893764|gb|ADC65301.1| ribosomal protein S3 [Ferroglobus placidus DSM 10642]
Length = 223
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYP----VKEYIDSA 101
+ A Y L IME+GAKGCE+ +SGKL ++RA + KF G +I +G P V+E D A
Sbjct: 109 RKAGYRFLYRIMEAGAKGCEIEISGKLTSERARTEKFIAGTIIHTGDPAITCVREGFDIA 168
Query: 102 VRHV 105
++ +
Sbjct: 169 IKKL 172
>gi|327400866|ref|YP_004341705.1| 30S ribosomal protein S3 [Archaeoglobus veneficus SNP6]
gi|327316374|gb|AEA46990.1| ribosomal protein S3 [Archaeoglobus veneficus SNP6]
Length = 246
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYP----VKEYIDSA 101
+ A Y L IME+GAKGCE+ +SGKL ++RA + KF G M+ +G P V++ D A
Sbjct: 109 RKAGYRFLYRIMEAGAKGCEIEISGKLTSERARTEKFLAGTMVHTGEPASSMVRKGFDIA 168
Query: 102 VRHV 105
++ +
Sbjct: 169 IKKL 172
>gi|284162454|ref|YP_003401077.1| 30S ribosomal protein S3 [Archaeoglobus profundus DSM 5631]
gi|284012451|gb|ADB58404.1| ribosomal protein S3 [Archaeoglobus profundus DSM 5631]
Length = 219
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
+ A Y L IME+GAKGC++ +SGKL ++RA + KF G ++ +G P E +D
Sbjct: 109 RRAGYRFLYRIMEAGAKGCQIEISGKLVSERARTEKFTAGTIVHTGDPAYELVDKG 164
>gi|390960788|ref|YP_006424622.1| 30S ribosomal protein S3 [Thermococcus sp. CL1]
gi|390519096|gb|AFL94828.1| 30S ribosomal protein S3P [Thermococcus sp. CL1]
Length = 210
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
++++F +E+ E++ N L A QA L + + + A Y +R IM +GA+
Sbjct: 69 LERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGVHFRRAAYSAIRAIMRNGAR 126
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYI 98
G E+ +SGKL +RA S++F GY+ G P + +
Sbjct: 127 GVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLV 162
>gi|126178520|ref|YP_001046485.1| 30S ribosomal protein S3P [Methanoculleus marisnigri JR1]
gi|152060874|sp|A3CT03.1|RS3_METMJ RecName: Full=30S ribosomal protein S3
gi|125861314|gb|ABN56503.1| SSU ribosomal protein S3P [Methanoculleus marisnigri JR1]
Length = 234
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 14/95 (14%)
Query: 5 KRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGC 64
++ + P + ++ AE++ N A+ + RK G + I R IMESGA GC
Sbjct: 83 QQVQNPNFNAQIMAERLAN----ALERGWYFRKAGSSTI----------RRIMESGALGC 128
Query: 65 EVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
EVIV+GKL R+ + KF +GY+ G P + ++
Sbjct: 129 EVIVAGKLTGSRSRTQKFTEGYIKHCGEPSETIVE 163
>gi|218884480|ref|YP_002428862.1| 30S ribosomal protein S3P [Desulfurococcus kamchatkensis 1221n]
gi|218766096|gb|ACL11495.1| 30S ribosomal protein S3P [Desulfurococcus kamchatkensis 1221n]
Length = 223
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 52 VLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
+L+ +M++GA G E+I+SGKLR +RAT K K G + +G PV+ +D AV L +
Sbjct: 119 MLKRVMDAGAIGAEIIISGKLRGERATYEKLKAGKVYKAGEPVEYMVDRAVVKALLKPG 177
>gi|390938985|ref|YP_006402723.1| 30S ribosomal protein S3 [Desulfurococcus fermentans DSM 16532]
gi|390192092|gb|AFL67148.1| ribosomal protein S3 [Desulfurococcus fermentans DSM 16532]
Length = 223
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 52 VLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
+L+ +M++GA G E+I+SGKLR +RAT K K G + +G PV+ +D AV L +
Sbjct: 119 MLKRVMDAGAIGAEIIISGKLRGERATYEKLKAGKVYKAGEPVEYIVDRAVVKALLKPG 177
>gi|9967236|dbj|BAB12320.1| hypothetical protein [Macaca fascicularis]
Length = 83
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKE---GLAVIVCKMACYGV 52
+ VQK F FPE SVELYA+KV RG IAQAESLR + GLAV + C V
Sbjct: 24 AVVQKTFGFPEGSVELYADKVATRGR-DIAQAESLRYKFLGGLAVRRAWLWCVAV 77
>gi|429217541|ref|YP_007175531.1| ribosomal protein S3, eukaryotic/archaeal type [Caldisphaera
lagunensis DSM 15908]
gi|429134070|gb|AFZ71082.1| ribosomal protein S3, eukaryotic/archaeal type [Caldisphaera
lagunensis DSM 15908]
Length = 247
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 52 VLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRH 104
LR I+E+GA G E+++SGKL +RA K + G +I +G V +Y+D AV H
Sbjct: 117 TLRRIIEAGAIGAEIVISGKLTNERAKFEKLQMGKVIKTGDIVDQYVDKAVAH 169
>gi|297619583|ref|YP_003707688.1| 30S ribosomal protein S3 [Methanococcus voltae A3]
gi|297378560|gb|ADI36715.1| ribosomal protein S3 [Methanococcus voltae A3]
Length = 218
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYI 98
+ +R +M +GAKG +IVSGKL +R+ + KF DGYM G P +E +
Sbjct: 111 TAHSAVRRVMNAGAKGVSIIVSGKLSGERSRTEKFMDGYMKHCGEPSEELV 161
>gi|45358967|ref|NP_988524.1| 30S ribosomal protein S3P [Methanococcus maripaludis S2]
gi|340624714|ref|YP_004743167.1| 30S ribosomal protein S3 [Methanococcus maripaludis X1]
gi|61215571|sp|Q6LXE7.1|RS3_METMP RecName: Full=30S ribosomal protein S3
gi|45047833|emb|CAF30960.1| SSU ribosomal protein S3P [Methanococcus maripaludis S2]
gi|339904982|gb|AEK20424.1| 30S ribosomal protein S3P [Methanococcus maripaludis X1]
Length = 211
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLX 107
+ +R +M SGAKG +IVSGKL +R+ + KF DGYM G P + ++ + H L
Sbjct: 111 TAHSAIRRVMGSGAKGVAIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKS--HQLA 168
Query: 108 RQASSIFCGYVKI 120
+ I VKI
Sbjct: 169 KLKLGIVGVTVKI 181
>gi|304314259|ref|YP_003849406.1| 30S ribosomal protein S3P [Methanothermobacter marburgensis str.
Marburg]
gi|302587718|gb|ADL58093.1| 30S ribosomal protein S3P [Methanothermobacter marburgensis str.
Marburg]
Length = 275
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 49 CYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYI 98
Y +R IM +GA+G EV +SGK+R R+ + KF DGY+ G P +++
Sbjct: 112 AYTTMRRIMAAGAQGVEVTISGKIRGARSATAKFTDGYIKKCGEPSTKHV 161
>gi|148807|gb|AAA86865.1| ribosomal protein S3 [Haloarcula marismortui]
Length = 304
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ ++ RF + V++ ++V+ L A A+ L + A + + IMESG
Sbjct: 67 TELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMESG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAV 102
A G E+++SGK+ R+ KF GY+ +G P +E +DS V
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGV 166
>gi|344212407|ref|YP_004796727.1| 30S ribosomal protein S3P [Haloarcula hispanica ATCC 33960]
gi|343783762|gb|AEM57739.1| 30S ribosomal protein S3P [Haloarcula hispanica ATCC 33960]
Length = 304
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ ++ RF + V++ ++V+ L A A+ L + A + + IMESG
Sbjct: 67 TELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMESG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAV 102
A G E+++SGK+ R+ KF GY+ +G P +E +DS V
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGV 166
>gi|134045220|ref|YP_001096706.1| 30S ribosomal protein S3P [Methanococcus maripaludis C5]
gi|189045017|sp|A4FWB6.1|RS3_METM5 RecName: Full=30S ribosomal protein S3
gi|132662845|gb|ABO34491.1| SSU ribosomal protein S3P [Methanococcus maripaludis C5]
Length = 211
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLX 107
+ +R +M SGAKG +IVSGKL +R+ + KF DGYM G P + ++ + H L
Sbjct: 111 TAHSAIRRVMGSGAKGVSIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKS--HQLA 168
Query: 108 RQASSIFCGYVKI 120
+ + VKI
Sbjct: 169 KLKLGVVGVTVKI 181
>gi|154150081|ref|YP_001403699.1| 30S ribosomal protein S3 [Methanoregula boonei 6A8]
gi|171769709|sp|A7I5P5.1|RS3_METB6 RecName: Full=30S ribosomal protein S3
gi|153998633|gb|ABS55056.1| ribosomal protein S3 [Methanoregula boonei 6A8]
Length = 231
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%)
Query: 13 SVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKL 72
S ++ ++V N A AE L + A ++R +M+SGA GCEV+++GKL
Sbjct: 77 SPQIEVQQVQNPSFNAQIMAERLANALERGWYFRKAGSSIMRRVMDSGALGCEVVIAGKL 136
Query: 73 RAQRATSMKFKDGYMISSGYP 93
RA + KF +GY+ G P
Sbjct: 137 TGARARTQKFTEGYIKHCGEP 157
>gi|150402573|ref|YP_001329867.1| 30S ribosomal protein S3P [Methanococcus maripaludis C7]
gi|189045018|sp|A6VGZ0.1|RS3_METM7 RecName: Full=30S ribosomal protein S3
gi|150033603|gb|ABR65716.1| ribosomal protein S3 [Methanococcus maripaludis C7]
Length = 211
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLX 107
+ +R +M SGAKG +IVSGKL +R+ + KF DGYM G P + ++ + H L
Sbjct: 111 TAHSAIRRVMGSGAKGVSIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKS--HQLA 168
Query: 108 RQASSIFCGYVKI 120
+ + VKI
Sbjct: 169 KLKLGVVGVTVKI 181
>gi|55378378|ref|YP_136228.1| 30S ribosomal protein S3 [Haloarcula marismortui ATCC 43049]
gi|448636981|ref|ZP_21675429.1| 30S ribosomal protein S3P [Haloarcula sinaiiensis ATCC 33800]
gi|448648015|ref|ZP_21679493.1| 30S ribosomal protein S3P [Haloarcula californiae ATCC 33799]
gi|57015336|sp|P20281.2|RS3_HALMA RecName: Full=30S ribosomal protein S3; AltName: Full=HS1; AltName:
Full=HmaS3
gi|55231103|gb|AAV46522.1| 30S ribosomal protein S3P [Haloarcula marismortui ATCC 43049]
gi|445765287|gb|EMA16426.1| 30S ribosomal protein S3P [Haloarcula sinaiiensis ATCC 33800]
gi|445775885|gb|EMA26880.1| 30S ribosomal protein S3P [Haloarcula californiae ATCC 33799]
Length = 304
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ ++ RF + V++ ++V+ L A A+ L + A + + IMESG
Sbjct: 67 TELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMESG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAV 102
A G E+++SGK+ R+ KF GY+ +G P +E +DS V
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGV 166
>gi|435852132|ref|YP_007313718.1| ribosomal protein S3, eukaryotic/archaeal type
[Methanomethylovorans hollandica DSM 15978]
gi|433662762|gb|AGB50188.1| ribosomal protein S3, eukaryotic/archaeal type
[Methanomethylovorans hollandica DSM 15978]
Length = 304
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+ A + +R IM +GA GCE+++SGKL R+ S K GY+ +G P ++ +D
Sbjct: 110 RKAGHNAMRAIMNAGALGCEIVISGKLTGSRSRSEKIVQGYIKHAGKPAEDIVD 163
>gi|408381916|ref|ZP_11179463.1| 30S ribosomal protein S3P [Methanobacterium formicicum DSM 3637]
gi|407815364|gb|EKF85949.1| 30S ribosomal protein S3P [Methanobacterium formicicum DSM 3637]
Length = 426
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 49 CYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYI 98
Y LR IM +GA+G EV +SGK+R R+ KF DGY+ G P +Y+
Sbjct: 112 AYSALRRIMGAGAQGVEVTISGKIRGSRSACAKFTDGYIKKCGEPSIKYV 161
>gi|448681469|ref|ZP_21691560.1| 30S ribosomal protein S3P [Haloarcula argentinensis DSM 12282]
gi|445767339|gb|EMA18442.1| 30S ribosomal protein S3P [Haloarcula argentinensis DSM 12282]
Length = 305
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ ++ RF + V++ ++V+ L A A+ L + A + + IMESG
Sbjct: 67 TELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMESG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAV 102
A G E+++SGK+ R+ KF GY+ +G P +E +DS V
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGV 166
>gi|147919328|ref|YP_686936.1| 30S ribosomal protein S3P [Methanocella arvoryzae MRE50]
gi|121687826|sp|Q0W1Y3.1|RS3_UNCMA RecName: Full=30S ribosomal protein S3
gi|110622332|emb|CAJ37610.1| 30S ribosomal protein S3P [Methanocella arvoryzae MRE50]
Length = 279
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 14/95 (14%)
Query: 5 KRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGC 64
+ K PE + ++ A ++ N A+ + RK G + L+ IM+SGA GC
Sbjct: 83 QEVKKPELNAQMMATRLAN----ALERGWYFRKAGQST----------LQRIMDSGAMGC 128
Query: 65 EVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
EVI++GKL R KF GY+ G PV+E +D
Sbjct: 129 EVIIAGKLTGARKRREKFIAGYIKHCGKPVEELVD 163
>gi|448630844|ref|ZP_21673299.1| 30S ribosomal protein S3P [Haloarcula vallismortis ATCC 29715]
gi|445755218|gb|EMA06608.1| 30S ribosomal protein S3P [Haloarcula vallismortis ATCC 29715]
Length = 304
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ ++ RF + V++ ++V+ L A A+ L + A + + IMESG
Sbjct: 67 TELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMESG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAV 102
A G E+++SGK+ R+ KF GY+ +G P +E +DS V
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGV 166
>gi|448671521|ref|ZP_21687426.1| 30S ribosomal protein S3P [Haloarcula amylolytica JCM 13557]
gi|445764983|gb|EMA16123.1| 30S ribosomal protein S3P [Haloarcula amylolytica JCM 13557]
Length = 305
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ ++ RF + V++ ++V+ L A A+ L + A + + IMESG
Sbjct: 67 TELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMESG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAV 102
A G E+++SGK+ R+ KF GY+ +G P +E +DS V
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGV 166
>gi|15678039|ref|NP_275153.1| 30S ribosomal protein S3 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|6094177|sp|O26116.1|RS3_METTH RecName: Full=30S ribosomal protein S3
gi|2621055|gb|AAB84528.1| ribosomal protein S3 (E.coli ) [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 258
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 49 CYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHV 105
Y +R IM +GA+G EV +SGK+R R+ + KF DGY+ G P +V+HV
Sbjct: 112 AYTTMRRIMAAGAQGVEVTISGKIRGARSATAKFTDGYIKKCGEP-------SVKHV 161
>gi|70606406|ref|YP_255276.1| 30S ribosomal protein S3 [Sulfolobus acidocaldarius DSM 639]
gi|449066618|ref|YP_007433700.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius N8]
gi|449068892|ref|YP_007435973.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius Ron12/I]
gi|76363394|sp|Q4JB46.1|RS3_SULAC RecName: Full=30S ribosomal protein S3
gi|68567054|gb|AAY79983.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius DSM 639]
gi|449035126|gb|AGE70552.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius N8]
gi|449037400|gb|AGE72825.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius Ron12/I]
Length = 231
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAV 102
A + +R IM SGA G EVIVSGKL ++RA K K+G + SG +++ ID A+
Sbjct: 113 AAFITIRRIMSSGAVGAEVIVSGKLTSERAKYEKLKEGTVYKSGQQLEKIIDRAI 167
>gi|305662597|ref|YP_003858885.1| 30S ribosomal protein S3 [Ignisphaera aggregans DSM 17230]
gi|304377166|gb|ADM27005.1| SSU ribosomal protein S3P [Ignisphaera aggregans DSM 17230]
Length = 209
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHV 105
+ A + LR +M +GA GCE+++SGKL A+RA K K G + SG +D AV HV
Sbjct: 111 RRAGFIALRRVMAAGAIGCEIVISGKLVAERARYEKLKMGKVYKSGEQSFRLVDRAVAHV 170
Query: 106 LXR 108
L +
Sbjct: 171 LLK 173
>gi|91772089|ref|YP_564781.1| 30S ribosomal protein S3P [Methanococcoides burtonii DSM 6242]
gi|121687004|sp|Q12ZU5.1|RS3_METBU RecName: Full=30S ribosomal protein S3
gi|91711104|gb|ABE51031.1| SSU ribosomal protein S3P [Methanococcoides burtonii DSM 6242]
Length = 304
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 15 ELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKLRA 74
EL A+ + +R +I + RK G + +R +M +GA GCE+++SGKL
Sbjct: 89 ELNAQMMASRLASSIERGWYFRKAG----------HNTMRAVMNAGALGCEIVISGKLTG 138
Query: 75 QRATSMKFKDGYMISSGYPVKEYIDSA 101
R+ K +GY+ +G PV + +D
Sbjct: 139 SRSRVEKMVNGYIKHAGKPVDDIVDDG 165
>gi|159905652|ref|YP_001549314.1| 30S ribosomal protein S3P [Methanococcus maripaludis C6]
gi|226697730|sp|A9A9Q9.1|RS3_METM6 RecName: Full=30S ribosomal protein S3
gi|159887145|gb|ABX02082.1| ribosomal protein S3 [Methanococcus maripaludis C6]
Length = 211
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLX 107
+ +R +M SGAKG +IVSGKL +R+ + KF DGYM G P + ++ + H L
Sbjct: 111 TAHSAIRRVMGSGAKGVAIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKS--HQLA 168
Query: 108 RQASSIFCGYVKI 120
+ + VKI
Sbjct: 169 KLKLGVVGVTVKI 181
>gi|448685266|ref|ZP_21693258.1| 30S ribosomal protein S3P [Haloarcula japonica DSM 6131]
gi|445781877|gb|EMA32728.1| 30S ribosomal protein S3P [Haloarcula japonica DSM 6131]
Length = 310
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ ++ RF + V++ ++V+ L A A+ L + A + + IMESG
Sbjct: 67 TELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMESG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAV 102
A G E+++SGK+ R+ KF GY+ +G P +E +DS V
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGV 166
>gi|410722176|ref|ZP_11361485.1| ribosomal protein S3, eukaryotic/archaeal type, partial
[Methanobacterium sp. Maddingley MBC34]
gi|410597412|gb|EKQ52031.1| ribosomal protein S3, eukaryotic/archaeal type, partial
[Methanobacterium sp. Maddingley MBC34]
Length = 274
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 49 CYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYI 98
Y LR IM +GA+G EV +SGK+R R+ KF DGY+ G P +Y+
Sbjct: 112 AYSALRRIMGAGAQGVEVTISGKIRGSRSACAKFTDGYIKKCGEPSIKYV 161
>gi|294496011|ref|YP_003542504.1| 30S ribosomal protein S3P [Methanohalophilus mahii DSM 5219]
gi|292667010|gb|ADE36859.1| SSU ribosomal protein S3P [Methanohalophilus mahii DSM 5219]
Length = 314
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
+ A + +R IM SGA GCE+I+SGK+ R+ K +GY+ +G PV + +D
Sbjct: 110 RKAGHNAMRAIMNSGALGCEIILSGKVTGARSRVEKMVNGYIKHAGKPVDDIVDEG 165
>gi|333987673|ref|YP_004520280.1| 30S ribosomal protein S3 [Methanobacterium sp. SWAN-1]
gi|333825817|gb|AEG18479.1| ribosomal protein S3 [Methanobacterium sp. SWAN-1]
Length = 315
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 49 CYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYI 98
Y LR IM +GA+G EV +SGK+R R+ KF DGY+ G P +++
Sbjct: 112 AYTALRRIMGAGAQGVEVTISGKIRGSRSACSKFTDGYIKKCGEPANKHV 161
>gi|150399466|ref|YP_001323233.1| 30S ribosomal protein S3P [Methanococcus vannielii SB]
gi|171460840|sp|A6UQ49.1|RS3_METVS RecName: Full=30S ribosomal protein S3
gi|150012169|gb|ABR54621.1| ribosomal protein S3 [Methanococcus vannielii SB]
Length = 211
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYI 98
+ +R +M +GAKG +I+SGKL +R+ + KF DGYM G P +E +
Sbjct: 111 TAHSAVRRVMAAGAKGVAIIISGKLSGERSRTEKFMDGYMKHCGEPAEELV 161
>gi|296109315|ref|YP_003616264.1| 30S ribosomal protein S3 [methanocaldococcus infernus ME]
gi|295434129|gb|ADG13300.1| ribosomal protein S3 [Methanocaldococcus infernus ME]
Length = 211
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 5 KRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGC 64
K FK +++ + V N L A AE + + + + + +R +M +GAKG
Sbjct: 70 KEFKLDRPQIDV--KPVENPDLDAQVVAEKIARALERGMHFRRVGHTAVRRVMNAGAKGV 127
Query: 65 EVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
VI+SGKL +RA + KF GYM G P ++ +D
Sbjct: 128 VVIISGKLTGERARTEKFMAGYMKHCGEPAEDLVDKG 164
>gi|14591528|ref|NP_143610.1| 30S ribosomal protein S3 [Pyrococcus horikoshii OT3]
gi|6647791|sp|O59424.1|RS3_PYRHO RecName: Full=30S ribosomal protein S3
gi|3258205|dbj|BAA30888.1| 210aa long hypothetical 30S ribosomal protein S3 [Pyrococcus
horikoshii OT3]
Length = 210
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 43 IVCKMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAV 102
I + A Y +R IM +GA+G E+ +SGKL +RA S++F GY+ G P + +
Sbjct: 107 IHFRRAAYSAMRAIMNNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGY 166
Query: 103 RHVLXR 108
L +
Sbjct: 167 AQALLK 172
>gi|336477155|ref|YP_004616296.1| 30S ribosomal protein S3 [Methanosalsum zhilinae DSM 4017]
gi|335930536|gb|AEH61077.1| ribosomal protein S3 [Methanosalsum zhilinae DSM 4017]
Length = 311
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%)
Query: 12 NSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGK 71
++ ++ A++V N L A A L + A + +R IM +GA GCE+++SGK
Sbjct: 76 DNPQIDAQEVKNPALNAQIMASRLASSIERGWYFRKAGHNAMRAIMGAGALGCEIVLSGK 135
Query: 72 LRAQRATSMKFKDGYMISSGYPVKEYID 99
L R+ K +GY+ +G PV + +D
Sbjct: 136 LTGSRSRVEKMVNGYIKHAGKPVDDIVD 163
>gi|257387882|ref|YP_003177655.1| 30S ribosomal protein S3 [Halomicrobium mukohataei DSM 12286]
gi|257170189|gb|ACV47948.1| ribosomal protein S3 [Halomicrobium mukohataei DSM 12286]
Length = 317
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAV 102
+ A + + IME+GAKG E+++SGK+ R+ KF GY+ +G P + +DS V
Sbjct: 110 RKAGHTTIDRIMEAGAKGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAENIVDSGV 166
>gi|289193197|ref|YP_003459138.1| 30S ribosomal protein S3 [Methanocaldococcus sp. FS406-22]
gi|288939647|gb|ADC70402.1| ribosomal protein S3 [Methanocaldococcus sp. FS406-22]
Length = 207
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 50 YGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
+ +R +M +GAKG VI+SGKL +RA + KF GYM G P +E +D
Sbjct: 113 HTAVRRVMNAGAKGVIVIISGKLTGERARTEKFMAGYMKHCGEPAEELVDKG 164
>gi|15668638|ref|NP_247436.1| 30S ribosomal protein S3 [Methanocaldococcus jannaschii DSM 2661]
gi|1710763|sp|P54034.1|RS3_METJA RecName: Full=30S ribosomal protein S3
gi|1591163|gb|AAB98450.1| SSU ribosomal protein S3P (rpsC) [Methanocaldococcus jannaschii DSM
2661]
Length = 208
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 50 YGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
+ +R +M +GAKG VI+SGKL +RA + KF GYM G P +E +D
Sbjct: 113 HTAVRRVMNAGAKGVIVIISGKLTGERARTEKFMAGYMKHCGEPAEELVDKG 164
>gi|330508492|ref|YP_004384920.1| 30S ribosomal protein S3P [Methanosaeta concilii GP6]
gi|328929300|gb|AEB69102.1| ribosomal protein S3P [Methanosaeta concilii GP6]
Length = 278
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+ A ++R +M++GA GCE+++SGKL R+ + KF GY+ SG P + +D
Sbjct: 110 RKAGQSMMRRVMDAGALGCEIVISGKLTGPRSRTEKFIAGYIKHSGKPAIDLVD 163
>gi|156937383|ref|YP_001435179.1| 30S ribosomal protein S3 [Ignicoccus hospitalis KIN4/I]
gi|172044464|sp|A8AA20.1|RS3_IGNH4 RecName: Full=30S ribosomal protein S3
gi|156566367|gb|ABU81772.1| SSU ribosomal protein S3P [Ignicoccus hospitalis KIN4/I]
Length = 241
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHV 105
+ A Y LR IM +GA G +V VSGKLR +RA K+ G + SG V D A+ HV
Sbjct: 115 RRAAYTTLRRIMGAGAIGAQVKVSGKLRGERARFEKYIAGKVYKSGNQVVRLTDRAIAHV 174
Query: 106 LXR 108
L +
Sbjct: 175 LLK 177
>gi|448411351|ref|ZP_21575816.1| 30S ribosomal protein S3P [Halosimplex carlsbadense 2-9-1]
gi|445670539|gb|ELZ23138.1| 30S ribosomal protein S3P [Halosimplex carlsbadense 2-9-1]
Length = 319
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ +++RF + V++ ++V+ L A A+ L + A + + IMESG
Sbjct: 67 TELEERFDLEDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMESG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAV 102
AKG E+++SGK+ R+ KF GY+ +G P + +D V
Sbjct: 125 AKGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAENIVDHGV 166
>gi|256810641|ref|YP_003128010.1| 30S ribosomal protein S3 [Methanocaldococcus fervens AG86]
gi|256793841|gb|ACV24510.1| ribosomal protein S3 [Methanocaldococcus fervens AG86]
Length = 207
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 50 YGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+ +R +M +GAKG VI+SGKL +RA + KF GYM G P +E +D
Sbjct: 113 HTAVRRVMNAGAKGVIVIISGKLTGERARTEKFMAGYMKHCGEPAEELVD 162
>gi|261402351|ref|YP_003246575.1| 30S ribosomal protein S3 [Methanocaldococcus vulcanius M7]
gi|261369344|gb|ACX72093.1| ribosomal protein S3 [Methanocaldococcus vulcanius M7]
Length = 206
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 50 YGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+ +R +M +GAKG VI+SGKL +RA + KF GYM G P +E +D
Sbjct: 113 HTAVRRVMNAGAKGVIVIISGKLTGERARTEKFMAGYMKHCGEPAEELVD 162
>gi|409096178|ref|ZP_11216202.1| 30S ribosomal protein S3P [Thermococcus zilligii AN1]
Length = 209
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
++++F +E+ E++ N L A QA L + I + A Y + IM +GA+
Sbjct: 69 LERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIGAIMRNGAR 126
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYI 98
G E+ +SGKL +RA S++F GY+ G P + +
Sbjct: 127 GVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLV 162
>gi|297527401|ref|YP_003669425.1| 30S ribosomal protein S3 [Staphylothermus hellenicus DSM 12710]
gi|297256317|gb|ADI32526.1| ribosomal protein S3 [Staphylothermus hellenicus DSM 12710]
Length = 225
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 23 NRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKF 82
N + A +L KE I + +LR IME+GA G E+I+SGKLR++RA K
Sbjct: 94 NARVVAFRIVRALEKE----IPYRRVAMAMLRRIMEAGAVGAEIIISGKLRSERARYQKL 149
Query: 83 KDGYMISSGYPVKEYIDSAVRHVLXRQ 109
K G + +G V +D AV L ++
Sbjct: 150 KAGRIYKAGDMVDYVVDRAVGKALLKR 176
>gi|410670345|ref|YP_006922716.1| 30S ribosomal protein S3P [Methanolobus psychrophilus R15]
gi|409169473|gb|AFV23348.1| 30S ribosomal protein S3P [Methanolobus psychrophilus R15]
Length = 310
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+ A + +R IM +GA GCE+++SGKL R+ K GY+ +G PV + +D
Sbjct: 110 RKAGHNTIRAIMNAGALGCEIVISGKLTGARSRVEKIVQGYIKHAGKPVDDIVD 163
>gi|298674796|ref|YP_003726546.1| 30S ribosomal protein S3 [Methanohalobium evestigatum Z-7303]
gi|298287784|gb|ADI73750.1| ribosomal protein S3 [Methanohalobium evestigatum Z-7303]
Length = 307
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 13 SVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKL 72
+ EL A+ + R +I + RK G + +R IM +GA GCE+I+SGKL
Sbjct: 87 TPELNAQMMATRLAASIERGWYFRKAG----------HNAIRAIMGAGALGCEIIMSGKL 136
Query: 73 RAQRATSMKFKDGYMISSGYPVKEYIDSA 101
RA K GY+ +G PV + +D
Sbjct: 137 TGPRARVEKLVRGYIKHAGKPVDDIVDEG 165
>gi|150401811|ref|YP_001325577.1| 30S ribosomal protein S3 [Methanococcus aeolicus Nankai-3]
gi|171460867|sp|A6UWU3.1|RS3_META3 RecName: Full=30S ribosomal protein S3
gi|150014514|gb|ABR56965.1| ribosomal protein S3 [Methanococcus aeolicus Nankai-3]
Length = 208
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 49 CYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+ +R +M GAKG VIVSGKL +R+ + K+ +GYM G P +E +D
Sbjct: 112 AHSAIRRVMAQGAKGVVVIVSGKLTGERSRTEKYMEGYMKHCGEPSEELVD 162
>gi|84489702|ref|YP_447934.1| 30S ribosomal protein S3P [Methanosphaera stadtmanae DSM 3091]
gi|121729293|sp|Q2NFW2.1|RS3_METST RecName: Full=30S ribosomal protein S3
gi|84373021|gb|ABC57291.1| 30S ribosomal protein S3P [Methanosphaera stadtmanae DSM 3091]
Length = 252
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 49 CYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYI 98
Y ++R IM +GA+G EV +SGK+R R+ KF +GY+ G P +Y+
Sbjct: 112 AYSIIRRIMSAGAQGVEVTISGKIRGSRSACAKFNEGYIKKCGEPSIKYV 161
>gi|429190338|ref|YP_007176016.1| ribosomal protein S3, eukaryotic/archaeal type [Natronobacterium
gregoryi SP2]
gi|448326250|ref|ZP_21515617.1| 30S ribosomal protein S3P [Natronobacterium gregoryi SP2]
gi|429134556|gb|AFZ71567.1| ribosomal protein S3, eukaryotic/archaeal type [Natronobacterium
gregoryi SP2]
gi|445612907|gb|ELY66624.1| 30S ribosomal protein S3P [Natronobacterium gregoryi SP2]
Length = 317
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+A+++RF + V++ ++V+ L A A+ L + A + + IME+G
Sbjct: 67 TALEERFDLEDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMEAG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
A G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYIKHNGQPAEEIVDEG 165
>gi|282164896|ref|YP_003357281.1| 30S ribosomal protein S3P [Methanocella paludicola SANAE]
gi|282157210|dbj|BAI62298.1| 30S ribosomal protein S3P [Methanocella paludicola SANAE]
Length = 292
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
A L+ IM+SGA G E++++GKL R + KF GY+ G PV+E++D
Sbjct: 112 AGQSTLQRIMDSGAMGVEIVIAGKLTGPRKRTEKFIAGYIKHCGKPVEEFVD 163
>gi|11499503|ref|NP_070744.1| 30S ribosomal protein S3P [Archaeoglobus fulgidus DSM 4304]
gi|6094176|sp|O28360.1|RS3_ARCFU RecName: Full=30S ribosomal protein S3
gi|2648625|gb|AAB89335.1| SSU ribosomal protein S3P (rps3P) [Archaeoglobus fulgidus DSM 4304]
Length = 229
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYI 98
+ A Y L IME+GAKGCE+ +SGKL ++RA + KF G ++ +G P + +
Sbjct: 109 RRAGYRFLYRIMEAGAKGCEIEISGKLVSERARTEKFVAGTIVHTGDPAESMV 161
>gi|20094278|ref|NP_614125.1| 30S ribosomal protein S3 [Methanopyrus kandleri AV19]
gi|27734506|sp|Q8TX35.1|RS3_METKA RecName: Full=30S ribosomal protein S3
gi|19887318|gb|AAM02055.1| Ribosomal protein S3 [Methanopyrus kandleri AV19]
Length = 227
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 43 IVCKMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYI 98
I + A YG LR IM +GAKG +I+SGKL RA + KF +G + G P EY+
Sbjct: 115 IHFRRAAYGALRRIMNAGAKGAMIILSGKLIGARARTEKFMEGAVKYCGEPGDEYM 170
>gi|325958537|ref|YP_004290003.1| 30S ribosomal protein S3 [Methanobacterium sp. AL-21]
gi|325329969|gb|ADZ09031.1| ribosomal protein S3 [Methanobacterium sp. AL-21]
Length = 299
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 49 CYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYP 93
Y LR IM +GA+G EV +SGK+R R+ KF DGY+ G P
Sbjct: 112 AYTALRRIMGAGAQGVEVTISGKIRGSRSACAKFSDGYIKKCGEP 156
>gi|14600662|ref|NP_147181.1| 30S ribosomal protein S3 [Aeropyrum pernix K1]
gi|6685919|sp|Q9YF78.1|RS3_AERPE RecName: Full=30S ribosomal protein S3
gi|5104002|dbj|BAA79318.1| 30S ribosomal protein S3P [Aeropyrum pernix K1]
Length = 246
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 4 QKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKG 63
Q F P + + E+ N L A QA + + I + + + IM +GA G
Sbjct: 72 QTVFGLPNPRIRV--EQPENPMLDARVQAFRIARSIERGIHFRRVAFAAINRIMSNGALG 129
Query: 64 CEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
E+ +SGKL ++RA KFK G + SG+ V E +D A
Sbjct: 130 VEITISGKLTSERARFEKFKAGKVYKSGHKVDELVDRA 167
>gi|76803063|ref|YP_331158.1| 30S ribosomal protein S3P [Natronomonas pharaonis DSM 2160]
gi|91207821|sp|Q3IMY2.1|RS3_NATPD RecName: Full=30S ribosomal protein S3
gi|76558928|emb|CAI50524.1| 30S ribosomal protein S3 [Natronomonas pharaonis DSM 2160]
Length = 305
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAV 102
+ A + + IMESGA G E+I+SGK+ R+ KF GY+ +G P + +DS V
Sbjct: 110 RKAGHTTIDRIMESGALGAEIILSGKVTGARSRVEKFNRGYIKHNGEPAESIVDSGV 166
>gi|335437506|ref|ZP_08560282.1| 30S ribosomal protein S3P [Halorhabdus tiamatea SARL4B]
gi|335438903|ref|ZP_08561634.1| 30S ribosomal protein S3P [Halorhabdus tiamatea SARL4B]
gi|334890174|gb|EGM28448.1| 30S ribosomal protein S3P [Halorhabdus tiamatea SARL4B]
gi|334895854|gb|EGM34017.1| 30S ribosomal protein S3P [Halorhabdus tiamatea SARL4B]
Length = 326
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+ A + + IMESGAKG E+++SGK+ R+ KF GY+ +G P ++ +D
Sbjct: 110 RKAGHTTIDRIMESGAKGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEDIVD 163
>gi|257053365|ref|YP_003131198.1| 30S ribosomal protein S3P [Halorhabdus utahensis DSM 12940]
gi|256692128|gb|ACV12465.1| ribosomal protein S3 [Halorhabdus utahensis DSM 12940]
Length = 326
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
+ A + + IMESGAKG E+++SGK+ R+ KF GY+ +G P ++ +D
Sbjct: 110 RKAGHTTIDRIMESGAKGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEDIVDHG 165
>gi|126465922|ref|YP_001041031.1| 30S ribosomal protein S3 [Staphylothermus marinus F1]
gi|152060907|sp|A3DNB3.1|RS3_STAMF RecName: Full=30S ribosomal protein S3
gi|126014745|gb|ABN70123.1| SSU ribosomal protein S3P [Staphylothermus marinus F1]
Length = 224
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 23 NRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKF 82
N + A +L KE I + +LR +ME+GA G E+I+SGKLR++RA K
Sbjct: 94 NARIVAFRIVRALEKE----IPYRRVAMAMLRRVMEAGAVGAEIIISGKLRSERARYEKL 149
Query: 83 KDGYMISSGYPVKEYIDSAVRHVLXRQ 109
K G + +G V +D AV L ++
Sbjct: 150 KAGRIYKAGDMVDYVVDRAVGKALLKR 176
>gi|432328995|ref|YP_007247139.1| ribosomal protein S3, eukaryotic/archaeal type [Aciduliprofundum
sp. MAR08-339]
gi|432135704|gb|AGB04973.1| ribosomal protein S3, eukaryotic/archaeal type [Aciduliprofundum
sp. MAR08-339]
Length = 239
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVK 95
A + LR IME+GAKG ++I++GKL RA + KF G + +G PV+
Sbjct: 111 AGHSTLRRIMEAGAKGAQIIIAGKLTGDRARTEKFMAGTIKYNGKPVE 158
>gi|119873216|ref|YP_931223.1| 30S ribosomal protein S3 [Pyrobaculum islandicum DSM 4184]
gi|152060899|sp|A1RV98.1|RS3_PYRIL RecName: Full=30S ribosomal protein S3
gi|119674624|gb|ABL88880.1| SSU ribosomal protein S3P [Pyrobaculum islandicum DSM 4184]
Length = 217
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 53 LRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
+R +ME+GAKG E++VSGKL +RA K G + GY K + AV HVL +
Sbjct: 127 VRQLMEAGAKGFEIVVSGKLSTERARFEKLTYGKLYKIGYDAKNRVRRAVVHVLLK 182
>gi|435848742|ref|YP_007310992.1| SSU ribosomal protein S3P [Natronococcus occultus SP4]
gi|433675010|gb|AGB39202.1| SSU ribosomal protein S3P [Natronococcus occultus SP4]
Length = 326
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+A++++F + +++ ++V+ L A A+ L + A + + IMESG
Sbjct: 67 TALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMESG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
A G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYIKHNGQPAEEVVD 163
>gi|424812835|ref|ZP_18238075.1| ribosomal protein S3, eukaryotic/archaeal type [Candidatus
Nanosalinarum sp. J07AB56]
gi|339757057|gb|EGQ40640.1| ribosomal protein S3, eukaryotic/archaeal type [Candidatus
Nanosalinarum sp. J07AB56]
Length = 366
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 1 SAVQKRFKF--PENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIME 58
S V+ F F P+ V E +N + A AE L K G A K Y LR + E
Sbjct: 84 SDVEDEFGFEDPQIEVNEIEEPDSNAQVVANNMAEWLEKGGSA----KRVGYTYLRRVRE 139
Query: 59 SGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVR 103
+G G ++ VSGKL R + KF GY+ G E +D R
Sbjct: 140 TGVIGAQIEVSGKLSGNRGRTEKFSFGYVKRCGDTADEQVDRGYR 184
>gi|126459168|ref|YP_001055446.1| 30S ribosomal protein S3 [Pyrobaculum calidifontis JCM 11548]
gi|126248889|gb|ABO07980.1| SSU ribosomal protein S3P [Pyrobaculum calidifontis JCM 11548]
Length = 220
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 53 LRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
+R +ME+GAKG E++VSGKL +RA K G + GY K + AV HVL +
Sbjct: 131 VRQLMEAGAKGFEIVVSGKLSTERAKFEKITYGKLYKIGYDAKNRVRRAVVHVLLK 186
>gi|152060898|sp|A3MTL3.2|RS3_PYRCJ RecName: Full=30S ribosomal protein S3
Length = 216
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 53 LRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
+R +ME+GAKG E++VSGKL +RA K G + GY K + AV HVL +
Sbjct: 127 VRQLMEAGAKGFEIVVSGKLSTERAKFEKITYGKLYKIGYDAKNRVRRAVVHVLLK 182
>gi|448704122|ref|ZP_21700603.1| 30S ribosomal protein S3P [Halobiforma nitratireducens JCM 10879]
gi|445796511|gb|EMA47015.1| 30S ribosomal protein S3P [Halobiforma nitratireducens JCM 10879]
Length = 320
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+A+++RF + V++ ++V L A A+ L + A + + IME+G
Sbjct: 67 TALEERFDLEDPQVDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMEAG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
A G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYIKHNGQPAEEIVDEG 165
>gi|52550170|gb|AAU84019.1| SSU ribosomal protein S3p [uncultured archaeon GZfos35D7]
Length = 359
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHV 105
+ A + LR IM +GA GC +++SGKL R+ K +GY++ +G P +E + +
Sbjct: 110 RKAAHSTLRRIMGAGALGCRIVLSGKLTGPRSRIEKIVEGYIVHAGKPAEEIVHTGFATA 169
Query: 106 LXRQASSIFC 115
+ R+ +I C
Sbjct: 170 V-RKLGTIGC 178
>gi|15897617|ref|NP_342222.1| 30S ribosomal protein S3 [Sulfolobus solfataricus P2]
gi|284174942|ref|ZP_06388911.1| 30S ribosomal protein S3P [Sulfolobus solfataricus 98/2]
gi|384434231|ref|YP_005643589.1| 30S ribosomal protein S3 [Sulfolobus solfataricus 98/2]
gi|11134364|sp|Q9UXA0.1|RS3_SULSO RecName: Full=30S ribosomal protein S3
gi|6015765|emb|CAB57592.1| ribosomal protein S3 (HMAS3) [Sulfolobus solfataricus P2]
gi|13813882|gb|AAK41012.1| SSU ribosomal protein S3AB (rps3AB) [Sulfolobus solfataricus P2]
gi|261602385|gb|ACX91988.1| ribosomal protein S3 [Sulfolobus solfataricus 98/2]
Length = 229
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAV 102
A + +R IM +GA G E+I+SGKL +RA K K+G + SG +++ ID A+
Sbjct: 113 AAFISMRRIMNAGALGAEIIISGKLTTERARYEKLKEGIVYKSGQQLEKMIDRAI 167
>gi|227827697|ref|YP_002829477.1| 30S ribosomal protein S3 [Sulfolobus islandicus M.14.25]
gi|227830393|ref|YP_002832173.1| 30S ribosomal protein S3 [Sulfolobus islandicus L.S.2.15]
gi|229579212|ref|YP_002837610.1| 30S ribosomal protein S3 [Sulfolobus islandicus Y.G.57.14]
gi|229582036|ref|YP_002840435.1| 30S ribosomal protein S3 [Sulfolobus islandicus Y.N.15.51]
gi|229584901|ref|YP_002843403.1| 30S ribosomal protein S3 [Sulfolobus islandicus M.16.27]
gi|238619868|ref|YP_002914694.1| 30S ribosomal protein S3 [Sulfolobus islandicus M.16.4]
gi|284997900|ref|YP_003419667.1| 30S ribosomal protein S3 [Sulfolobus islandicus L.D.8.5]
gi|385773369|ref|YP_005645935.1| 30S ribosomal protein S3 [Sulfolobus islandicus HVE10/4]
gi|385776007|ref|YP_005648575.1| 30S ribosomal protein S3 [Sulfolobus islandicus REY15A]
gi|227456841|gb|ACP35528.1| ribosomal protein S3 [Sulfolobus islandicus L.S.2.15]
gi|227459493|gb|ACP38179.1| ribosomal protein S3 [Sulfolobus islandicus M.14.25]
gi|228009926|gb|ACP45688.1| ribosomal protein S3 [Sulfolobus islandicus Y.G.57.14]
gi|228012752|gb|ACP48513.1| ribosomal protein S3 [Sulfolobus islandicus Y.N.15.51]
gi|228019951|gb|ACP55358.1| ribosomal protein S3 [Sulfolobus islandicus M.16.27]
gi|238380938|gb|ACR42026.1| ribosomal protein S3 [Sulfolobus islandicus M.16.4]
gi|284445795|gb|ADB87297.1| ribosomal protein S3 [Sulfolobus islandicus L.D.8.5]
gi|323474755|gb|ADX85361.1| ribosomal protein S3 [Sulfolobus islandicus REY15A]
gi|323477483|gb|ADX82721.1| ribosomal protein S3 [Sulfolobus islandicus HVE10/4]
Length = 216
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAV 102
A + +R IM +GA G E+I+SGKL +RA K K+G + SG +++ ID A+
Sbjct: 100 AAFISMRRIMNAGALGAEIIISGKLTTERARYEKLKEGIVYKSGQQLEKMIDRAI 154
>gi|15790638|ref|NP_280462.1| 30S ribosomal protein S3 [Halobacterium sp. NRC-1]
gi|169236377|ref|YP_001689577.1| 30S ribosomal protein S3P [Halobacterium salinarum R1]
gi|21264507|sp|P15009.3|RS3_HALSA RecName: Full=30S ribosomal protein S3; AltName: Full=HHAS3;
AltName: Full=HS4
gi|2425182|dbj|BAA22276.1| ribosomal protein S3 [Halobacterium salinarum]
gi|10581165|gb|AAG19942.1| 30S ribosomal protein S3P [Halobacterium sp. NRC-1]
gi|167727443|emb|CAP14231.1| 30S ribosomal protein S3 [Halobacterium salinarum R1]
Length = 302
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+ A + + IMESGA G E+++SGK+ R KF GY+ +G P +E +D
Sbjct: 110 RKAGHTTIDRIMESGALGAEIVLSGKVTGNRGRVEKFNRGYIKHNGEPAEEIVD 163
>gi|170290796|ref|YP_001737612.1| 30S ribosomal protein S3 [Candidatus Korarchaeum cryptofilum OPF8]
gi|170174876|gb|ACB07929.1| ribosomal protein S3 [Candidatus Korarchaeum cryptofilum OPF8]
Length = 251
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHV 105
K Y L +M GAKG E+ +SGK +QRA +F++G + G E ++ AV+HV
Sbjct: 116 KKVAYSALGRVMAEGAKGVEIRLSGKFGSQRAREERFREGVIYRCGQDYIENVEYAVKHV 175
Query: 106 LXRQA 110
L Q
Sbjct: 176 LMPQG 180
>gi|171185213|ref|YP_001794132.1| 30S ribosomal protein S3 [Pyrobaculum neutrophilum V24Sta]
gi|170934425|gb|ACB39686.1| ribosomal protein S3- domain protein [Pyrobaculum neutrophilum
V24Sta]
Length = 224
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 53 LRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
+R +ME+GAKG E++VSGKL +RA K G + GY K + AV HVL +
Sbjct: 134 VRQLMEAGAKGFEIVVSGKLSTERARFEKHTYGKLYKIGYDAKNRVRRAVVHVLLK 189
>gi|448350187|ref|ZP_21539006.1| 30S ribosomal protein S3P [Natrialba taiwanensis DSM 12281]
gi|445637694|gb|ELY90842.1| 30S ribosomal protein S3P [Natrialba taiwanensis DSM 12281]
Length = 328
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+A+++RF + +++ ++V+ L A A+ L + A + + IME+G
Sbjct: 67 TALEERFDLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMEAG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDS 100
A G E+++SGK+ R+ KF GY+ +G P E +D
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAAEIVDE 164
>gi|452206442|ref|YP_007486564.1| 30S ribosomal protein S3 [Natronomonas moolapensis 8.8.11]
gi|452082542|emb|CCQ35800.1| 30S ribosomal protein S3 [Natronomonas moolapensis 8.8.11]
Length = 301
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAV 102
+ A + + IM+SGA G E+I+SGK+ R+ KF GY+ +G P + +DS V
Sbjct: 110 RKAGHTTIDRIMDSGALGAEIILSGKVTGARSRVEKFNRGYIKHNGEPAETIVDSGV 166
>gi|448362298|ref|ZP_21550909.1| 30S ribosomal protein S3P [Natrialba asiatica DSM 12278]
gi|445648819|gb|ELZ01767.1| 30S ribosomal protein S3P [Natrialba asiatica DSM 12278]
Length = 326
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+A+++RF + +++ ++V+ L A A+ L + A + + IME+G
Sbjct: 67 TALEERFDLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMEAG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
A G E+++SGK+ R+ KF GY+ +G P E +D
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAAEIVDEG 165
>gi|389860655|ref|YP_006362895.1| 30S ribosomal protein S3 [Thermogladius cellulolyticus 1633]
gi|388525559|gb|AFK50757.1| ribosomal protein S3 [Thermogladius cellulolyticus 1633]
Length = 228
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%)
Query: 52 VLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
+L+ IM++GA G E+++SGKLR +RAT K + G + +G V +D AV L +
Sbjct: 119 MLKRIMDAGALGAEIVISGKLRGERATYEKMRTGKIYKAGDLVDYIVDRAVAKTLLK 175
>gi|288560114|ref|YP_003423600.1| 30S ribosomal protein S3 [Methanobrevibacter ruminantium M1]
gi|288542824|gb|ADC46708.1| ribosomal protein S3P Rps3p [Methanobrevibacter ruminantium M1]
Length = 251
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 49 CYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYI 98
Y +R IM +GA+G EV +SGK+R R+ KF +GY+ G P ++
Sbjct: 112 AYSTIRKIMGAGAQGVEVTISGKIRGSRSAVAKFTEGYIKKCGEPATRFV 161
>gi|448399316|ref|ZP_21570618.1| 30S ribosomal protein S3P [Haloterrigena limicola JCM 13563]
gi|445669223|gb|ELZ21836.1| 30S ribosomal protein S3P [Haloterrigena limicola JCM 13563]
Length = 310
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 1 SAVQKRFKF--PENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIME 58
+A+++RF P+ V+ E N + A A +L + + A + + IME
Sbjct: 67 TALEERFNLEDPQIDVQEVEEPDLNARIVADRLANALER----GWYFRKAGHTTIDRIME 122
Query: 59 SGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
+GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 123 AGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHG 165
>gi|170052166|ref|XP_001862098.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
gi|167873123|gb|EDS36506.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
Length = 181
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 43/98 (43%), Gaps = 36/98 (36%)
Query: 16 LYAEKVNNRGLCAIAQAESLRKE---GLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKL 72
L+AEKV R LCAI QAESL + GLAV C+ ACYG
Sbjct: 46 LFAEKVATRSLCAIVQAESLCYKLIGGLAV--CR-ACYG--------------------- 81
Query: 73 RAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
F DG + S P E+ D+A RHVL R
Sbjct: 82 ---------FVDGIIFHSDDPSNEFSDTASRHVLLRHG 110
>gi|383319759|ref|YP_005380600.1| 30S ribosomal protein S3 [Methanocella conradii HZ254]
gi|379321129|gb|AFD00082.1| SSU ribosomal protein S3P [Methanocella conradii HZ254]
Length = 280
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
A L+ IM++GA G E++++GKL R + KF GY+ G PV+++ID
Sbjct: 112 AGQSTLQRIMDAGAMGVEIVIAGKLTGPRKRTEKFIAGYIKHCGKPVEQFID 163
>gi|448369933|ref|ZP_21556386.1| 30S ribosomal protein S3P [Natrialba aegyptia DSM 13077]
gi|445650373|gb|ELZ03297.1| 30S ribosomal protein S3P [Natrialba aegyptia DSM 13077]
Length = 328
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+A+++RF + +++ ++V+ L A A+ L + A + + IME+G
Sbjct: 67 TALEERFDLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMEAG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
A G E+++SGK+ R+ KF GY+ +G P E +D
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAAEIVDEG 165
>gi|27734520|sp|Q8ZWI0.2|RS3_PYRAE RecName: Full=30S ribosomal protein S3
Length = 218
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 53 LRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
+R +ME+GAKG E++VSGKL +RA K G + GY K + AV HVL +
Sbjct: 127 IRQLMEAGAKGFEIVVSGKLSTERARFEKQTYGKLYKIGYDAKNRVRRAVVHVLLK 182
>gi|15920635|ref|NP_376304.1| 30S ribosomal protein S3P [Sulfolobus tokodaii str. 7]
gi|27734524|sp|Q975I7.1|RS3_SULTO RecName: Full=30S ribosomal protein S3
gi|15621418|dbj|BAB65413.1| 30S ribosomal protein S3P [Sulfolobus tokodaii str. 7]
Length = 225
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAV 102
A + +R IM +GA G EVI+SGKL ++RA K K+G + SG + + +D AV
Sbjct: 113 AAFITIRRIMNAGALGAEVIISGKLTSERAKYEKLKEGVVYKSGAFLDKIVDRAV 167
>gi|332796534|ref|YP_004458034.1| 30S ribosomal protein S3 [Acidianus hospitalis W1]
gi|332694269|gb|AEE93736.1| ribosomal protein S3 [Acidianus hospitalis W1]
Length = 227
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAV 102
A + +R IM +GA G EV+VSGK+ ++RA K K+G + +G ++ ID AV
Sbjct: 113 AAFITIRRIMNAGALGAEVVVSGKITSERAKYEKLKEGTVYKTGNSLETMIDRAV 167
>gi|448323157|ref|ZP_21512621.1| 30S ribosomal protein S3P [Natronococcus amylolyticus DSM 10524]
gi|445600343|gb|ELY54356.1| 30S ribosomal protein S3P [Natronococcus amylolyticus DSM 10524]
Length = 313
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+A++++F + +++ ++V+ L A A+ L + A + + IM+SG
Sbjct: 67 TALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMDSG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
A G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVD 163
>gi|18312873|ref|NP_559540.1| 30S ribosomal protein S3 [Pyrobaculum aerophilum str. IM2]
gi|18160363|gb|AAL63722.1| ribosomal protein S3 [Pyrobaculum aerophilum str. IM2]
Length = 196
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 53 LRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
+R +ME+GAKG E++VSGKL +RA K G + GY K + AV HVL +
Sbjct: 105 IRQLMEAGAKGFEIVVSGKLSTERARFEKQTYGKLYKIGYDAKNRVRRAVVHVLLK 160
>gi|383625039|ref|ZP_09949445.1| 30S ribosomal protein S3P [Halobiforma lacisalsi AJ5]
gi|448697495|ref|ZP_21698535.1| 30S ribosomal protein S3P [Halobiforma lacisalsi AJ5]
gi|445781448|gb|EMA32304.1| 30S ribosomal protein S3P [Halobiforma lacisalsi AJ5]
Length = 318
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+A++++F + V++ ++V+ L A A+ L + A + + IME+G
Sbjct: 67 TALEEKFDLEDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMEAG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
A G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYIKHNGQPAEEIVDEG 165
>gi|124028161|ref|YP_001013481.1| 30S ribosomal protein S3P [Hyperthermus butylicus DSM 5456]
gi|152060866|sp|A2BMC5.1|RS3_HYPBU RecName: Full=30S ribosomal protein S3
gi|123978855|gb|ABM81136.1| 30S ribosomal protein S3P [Hyperthermus butylicus DSM 5456]
Length = 247
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 54 RFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHV 105
R ++ +GA G ++++SGKLR +RA K + G + ++G+ V+ +D AV HV
Sbjct: 119 RRVLNAGAIGVQIVISGKLRTERARYEKVRRGKVYTTGHQVEYMVDRAVMHV 170
>gi|433638927|ref|YP_007284687.1| ribosomal protein S3, eukaryotic/archaeal type [Halovivax ruber
XH-70]
gi|433290731|gb|AGB16554.1| ribosomal protein S3, eukaryotic/archaeal type [Halovivax ruber
XH-70]
Length = 314
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+A+++RF + +++ ++V+ L A A+ L + A + + IM++G
Sbjct: 67 TALEERFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMDAG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
A G E+++SGK+ R+ KF GY+ +G P E +D
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPADEVVD 163
>gi|336252434|ref|YP_004595541.1| 30S ribosomal protein S3 [Halopiger xanaduensis SH-6]
gi|335336423|gb|AEH35662.1| ribosomal protein S3 [Halopiger xanaduensis SH-6]
Length = 320
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+A++++F + V++ ++V+ L A A+ L + A + + IME+G
Sbjct: 67 TALEEKFNLEDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMEAG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
A G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEIVDEG 165
>gi|289579904|ref|YP_003478370.1| 30S ribosomal protein S3 [Natrialba magadii ATCC 43099]
gi|448281144|ref|ZP_21472452.1| 30S ribosomal protein S3P [Natrialba magadii ATCC 43099]
gi|289529457|gb|ADD03808.1| ribosomal protein S3 [Natrialba magadii ATCC 43099]
gi|445579468|gb|ELY33862.1| 30S ribosomal protein S3P [Natrialba magadii ATCC 43099]
Length = 335
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+A++++F + +++ ++V+ L A A+ L + A + + IME+G
Sbjct: 67 TALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMEAG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
A G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEIVDEG 165
>gi|448338128|ref|ZP_21527180.1| 30S ribosomal protein S3P [Natrinema pallidum DSM 3751]
gi|445623303|gb|ELY76725.1| 30S ribosomal protein S3P [Natrinema pallidum DSM 3751]
Length = 314
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 1 SAVQKRFKF--PENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIME 58
+A++ RF P+ V+ E N + A A +L + + A + + IME
Sbjct: 67 TALEDRFNLEDPQIDVQEVEEPDLNARIVADRLANALER----GWYFRKAGHTTIDRIME 122
Query: 59 SGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 123 AGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVD 163
>gi|448358810|ref|ZP_21547484.1| 30S ribosomal protein S3P [Natrialba chahannaoensis JCM 10990]
gi|445644490|gb|ELY97503.1| 30S ribosomal protein S3P [Natrialba chahannaoensis JCM 10990]
Length = 329
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+A++++F + +++ ++V+ L A A+ L + A + + IME+G
Sbjct: 67 TALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMEAG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
A G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEIVDEG 165
>gi|354610531|ref|ZP_09028487.1| ribosomal protein S3 [Halobacterium sp. DL1]
gi|353195351|gb|EHB60853.1| ribosomal protein S3 [Halobacterium sp. DL1]
Length = 323
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ +++RF + +++ ++V+ L A A+ L + A + + IME+G
Sbjct: 67 TQLEERFDLEDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTIDRIMEAG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
A G E+++SGK+ R KF GY+ +G P +E +D
Sbjct: 125 ALGAEIVLSGKVTGNRGRVEKFNRGYIKHNGEPAEEIVD 163
>gi|448345591|ref|ZP_21534480.1| 30S ribosomal protein S3P [Natrinema altunense JCM 12890]
gi|445633524|gb|ELY86711.1| 30S ribosomal protein S3P [Natrinema altunense JCM 12890]
Length = 312
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 1 SAVQKRFKF--PENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIME 58
+A++ RF P+ V+ E N + A A +L + + A + + IME
Sbjct: 67 TALEDRFNLEDPQIDVQEVEEPDLNARIVADRLANALER----GWYFRKAGHTTIDRIME 122
Query: 59 SGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 123 AGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVD 163
>gi|397773837|ref|YP_006541383.1| ribosomal protein S3 [Natrinema sp. J7-2]
gi|448341384|ref|ZP_21530345.1| 30S ribosomal protein S3P [Natrinema gari JCM 14663]
gi|397682930|gb|AFO57307.1| ribosomal protein S3 [Natrinema sp. J7-2]
gi|445628066|gb|ELY81377.1| 30S ribosomal protein S3P [Natrinema gari JCM 14663]
Length = 312
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 1 SAVQKRFKF--PENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIME 58
+A++ RF P+ V+ E N + A A +L + + A + + IME
Sbjct: 67 TALEDRFNLEDPQIDVQEVEEPDLNARIVADRLANALER----GWYFRKAGHTTIDRIME 122
Query: 59 SGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 123 AGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVD 163
>gi|448352603|ref|ZP_21541385.1| 30S ribosomal protein S3P [Natrialba hulunbeirensis JCM 10989]
gi|445642165|gb|ELY95235.1| 30S ribosomal protein S3P [Natrialba hulunbeirensis JCM 10989]
Length = 330
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+A++++F + +++ ++V+ L A A+ L + A + + IME+G
Sbjct: 67 TALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMEAG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
A G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEIVDEG 165
>gi|161899235|ref|XP_001712844.1| ribosomal protein S3 [Bigelowiella natans]
gi|75756337|gb|ABA27232.1| ribosomal protein S3 [Bigelowiella natans]
Length = 262
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 50 YGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDS 100
+ LRF++ SG +GC + + G R++R + KF+ G + SG ++IDS
Sbjct: 162 FNTLRFLINSGVRGCMIKLKGVYRSKRTKTFKFRRGLISHSGIQNNDWIDS 212
>gi|284165498|ref|YP_003403777.1| 30S ribosomal protein S3 [Haloterrigena turkmenica DSM 5511]
gi|284015153|gb|ADB61104.1| ribosomal protein S3 [Haloterrigena turkmenica DSM 5511]
Length = 317
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+A++++F + +++ ++V+ L A A+ L + A + + IME+G
Sbjct: 67 TALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMEAG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
A G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVD 163
>gi|388501238|gb|AFK38685.1| unknown [Lotus japonicus]
Length = 78
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/23 (86%), Positives = 21/23 (91%)
Query: 87 MISSGYPVKEYIDSAVRHVLXRQ 109
MISSG PVK+YIDSAVRHVL RQ
Sbjct: 1 MISSGQPVKDYIDSAVRHVLLRQ 23
>gi|395644922|ref|ZP_10432782.1| ribosomal protein S3 [Methanofollis liminatans DSM 4140]
gi|395441662|gb|EJG06419.1| ribosomal protein S3 [Methanofollis liminatans DSM 4140]
Length = 236
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYP 93
+ A +R +MESGA GCE+++SGKL R+ KF +GY+ G P
Sbjct: 110 RKAGQSTMRRVMESGALGCEIVLSGKLTGARSRVQKFLEGYVKHCGEP 157
>gi|448315118|ref|ZP_21504771.1| 30S ribosomal protein S3P [Natronococcus jeotgali DSM 18795]
gi|445612377|gb|ELY66103.1| 30S ribosomal protein S3P [Natronococcus jeotgali DSM 18795]
Length = 295
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+ A + + IM+SGA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 110 RKAGHTTIDRIMDSGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVD 163
>gi|448311974|ref|ZP_21501727.1| 30S ribosomal protein S3P [Natronolimnobius innermongolicus JCM
12255]
gi|445603595|gb|ELY57557.1| 30S ribosomal protein S3P [Natronolimnobius innermongolicus JCM
12255]
Length = 315
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+ A + + IME+GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 110 RKAGHTTIDRIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVD 163
>gi|448392355|ref|ZP_21567129.1| 30S ribosomal protein S3P [Haloterrigena salina JCM 13891]
gi|445664445|gb|ELZ17154.1| 30S ribosomal protein S3P [Haloterrigena salina JCM 13891]
Length = 318
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+ A + + IME+GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 110 RKAGHTTIDRIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVD 163
>gi|448302872|ref|ZP_21492822.1| 30S ribosomal protein S3P [Natronorubrum sulfidifaciens JCM 14089]
gi|445593879|gb|ELY48046.1| 30S ribosomal protein S3P [Natronorubrum sulfidifaciens JCM 14089]
Length = 313
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+ A + + IME+GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 110 RKAGHTTIDRIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVD 163
>gi|302348032|ref|YP_003815670.1| 30S ribosomal protein S3 [Acidilobus saccharovorans 345-15]
gi|302328444|gb|ADL18639.1| 30S ribosomal protein S3P [Acidilobus saccharovorans 345-15]
Length = 238
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 49 CYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAV 102
+R IME+GA G E+++SGKL +RA K + G +I +G V Y D A+
Sbjct: 114 AMATMRRIMEAGAVGVEIVISGKLSRERARFEKLQAGKVIKTGNVVDVYTDRAI 167
>gi|448309700|ref|ZP_21499556.1| 30S ribosomal protein S3P [Natronorubrum bangense JCM 10635]
gi|445589557|gb|ELY43787.1| 30S ribosomal protein S3P [Natronorubrum bangense JCM 10635]
Length = 308
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+ A + + IME+GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 110 RKAGHTTIDRIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVD 163
>gi|408404342|ref|YP_006862325.1| 30S ribosomal protein S3p [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|408364938|gb|AFU58668.1| 30S ribosomal protein S3p [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 222
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Query: 1 SAVQKRFKF--PENSV-ELYAEKVNNRGLCA-IAQAESLRKEGLAVIVCKMACYGVLRFI 56
+ ++++F P+ SV E+ ++N +C IAQ L + G A + A L I
Sbjct: 53 TKIEQKFGLQNPQISVLEVTNPELNPHIMCNRIAQ---LIERGTAF---RRAAMWSLNTI 106
Query: 57 MESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
M +GA G EV++SGKLR +RA K G + SG + + + V HVL +
Sbjct: 107 MNAGALGVEVVISGKLRTERAHFEKHTIGVVPKSGDIAGQIVTTGVSHVLTK 158
>gi|300521570|gb|ADK25996.1| r-protein S3p [Candidatus Nitrososphaera gargensis]
Length = 236
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Query: 1 SAVQKRFKF--PENSV-ELYAEKVNNRGLCA-IAQAESLRKEGLAVIVCKMACYGVLRFI 56
+ ++++F P+ SV E+ ++N +C IAQ L + G A + A L I
Sbjct: 67 TKIEQKFGLQNPQISVLEVTNPELNPHIMCNRIAQ---LIERGTA---FRRAAMWSLNTI 120
Query: 57 MESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
M +GA G EV++SGKLR +RA K G + SG + + + V HVL +
Sbjct: 121 MNAGALGVEVVISGKLRTERAHFEKHTIGVVPKSGDIAGQIVTTGVSHVLTK 172
>gi|313125796|ref|YP_004036066.1| 30S ribosomal protein S3 [Halogeometricum borinquense DSM 11551]
gi|448285635|ref|ZP_21476876.1| 30S ribosomal protein S3P [Halogeometricum borinquense DSM 11551]
gi|312292161|gb|ADQ66621.1| SSU ribosomal protein S3P [Halogeometricum borinquense DSM 11551]
gi|445576271|gb|ELY30728.1| 30S ribosomal protein S3P [Halogeometricum borinquense DSM 11551]
Length = 310
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 2 AVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGA 61
A++ RF + +++ ++V+ L A A+ L + A + + IM++GA
Sbjct: 68 ALETRFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMDAGA 125
Query: 62 KGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 126 LGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG 165
>gi|448377812|ref|ZP_21560508.1| 30S ribosomal protein S3P [Halovivax asiaticus JCM 14624]
gi|445655756|gb|ELZ08601.1| 30S ribosomal protein S3P [Halovivax asiaticus JCM 14624]
Length = 314
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+A++ RF + +++ ++V+ L A A+ L + A + + IM++G
Sbjct: 67 TALEDRFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMDAG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
A G E+++SGK+ R+ KF GY+ +G P E +D
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPADEVVD 163
>gi|315425856|dbj|BAJ47509.1| small subunit ribosomal protein S3 [Candidatus Caldiarchaeum
subterraneum]
gi|315427714|dbj|BAJ49310.1| small subunit ribosomal protein S3 [Candidatus Caldiarchaeum
subterraneum]
gi|343484671|dbj|BAJ50325.1| small subunit ribosomal protein S3 [Candidatus Caldiarchaeum
subterraneum]
Length = 203
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 50 YGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
+ ++ IME+GAKG EV +SGKL + R+ + KF +G+M SG Y+ VL +
Sbjct: 114 FWAVKRIMEAGAKGVEVHISGKLTSARSRTEKFTEGFMPKSGELAMNYVLEGKSSVLLK 172
>gi|110668735|ref|YP_658546.1| 30S ribosomal protein S3P [Haloquadratum walsbyi DSM 16790]
gi|385804235|ref|YP_005840635.1| 30S ribosomal protein S3 [Haloquadratum walsbyi C23]
gi|121689634|sp|Q18GF5.1|RS3_HALWD RecName: Full=30S ribosomal protein S3
gi|109626482|emb|CAJ52943.1| 30S ribosomal protein S3 [Haloquadratum walsbyi DSM 16790]
gi|339729727|emb|CCC41005.1| 30S ribosomal protein S3 [Haloquadratum walsbyi C23]
Length = 323
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
+ A + + I+ESGA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 110 RKAGHTTIDRIIESGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG 165
>gi|448475304|ref|ZP_21603022.1| 30S ribosomal protein S3P [Halorubrum aidingense JCM 13560]
gi|445816775|gb|EMA66662.1| 30S ribosomal protein S3P [Halorubrum aidingense JCM 13560]
Length = 313
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S ++ RF + +++ ++V+ L A A+ L + A + + IM++G
Sbjct: 67 SELEDRFGMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTIDRIMDAG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
A G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEVVD 163
>gi|448298471|ref|ZP_21488500.1| 30S ribosomal protein S3P [Natronorubrum tibetense GA33]
gi|445591667|gb|ELY45868.1| 30S ribosomal protein S3P [Natronorubrum tibetense GA33]
Length = 323
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+A++++F + +++ ++V+ L A A+ L + A + + IM++G
Sbjct: 67 TALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMDAG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
A G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVD 163
>gi|333910788|ref|YP_004484521.1| 30S ribosomal protein S3 [Methanotorris igneus Kol 5]
gi|333751377|gb|AEF96456.1| ribosomal protein S3 [Methanotorris igneus Kol 5]
Length = 209
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 49 CYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVR 103
+ +R +M +GAKG VI+SGKL +RA + KF GYM G P + + A +
Sbjct: 112 AHAAVRRVMNAGAKGVVVIISGKLTGERARTEKFMAGYMKHCGDPSETLVRKAFK 166
>gi|172046048|sp|A4WIY8.2|RS3_PYRAR RecName: Full=30S ribosomal protein S3
Length = 220
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 49 CYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
+ +R + E+GAKG E++VSGKL +RA K G + GY K + AV HVL +
Sbjct: 123 MFAAIRQLTEAGAKGFEIVVSGKLSTERARFEKQTFGKLYKIGYDAKNRVRRAVVHVLLK 182
>gi|146302882|ref|YP_001190198.1| 30S ribosomal protein S3 [Metallosphaera sedula DSM 5348]
gi|172046893|sp|A4YCX2.1|RS3_METS5 RecName: Full=30S ribosomal protein S3
gi|145701132|gb|ABP94274.1| SSU ribosomal protein S3P [Metallosphaera sedula DSM 5348]
Length = 240
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAV 102
A + +R IM +GA G EVIVSGK+ ++RA K K+G + +G + +D A+
Sbjct: 113 AAFMTIRRIMNAGALGAEVIVSGKITSERAKFEKLKEGIVYKTGNNLDVMVDRAI 167
>gi|448623086|ref|ZP_21669735.1| 30S ribosomal protein S3P [Haloferax denitrificans ATCC 35960]
gi|445753594|gb|EMA05011.1| 30S ribosomal protein S3P [Haloferax denitrificans ATCC 35960]
Length = 303
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
+ A + + IM++GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 110 RKAGHTTIDRIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG 165
>gi|374635645|ref|ZP_09707239.1| ribosomal protein S3 [Methanotorris formicicus Mc-S-70]
gi|373561498|gb|EHP87731.1| ribosomal protein S3 [Methanotorris formicicus Mc-S-70]
Length = 208
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 49 CYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYP 93
+ +R +M +GAKG VI+SGKL +RA + KF GYM G P
Sbjct: 112 AHAAVRRVMNAGAKGVVVIISGKLTGERARTEKFMAGYMKHCGDP 156
>gi|448583476|ref|ZP_21646832.1| 30S ribosomal protein S3P [Haloferax gibbonsii ATCC 33959]
gi|445729705|gb|ELZ81300.1| 30S ribosomal protein S3P [Haloferax gibbonsii ATCC 33959]
Length = 302
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
+ A + + IM++GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 110 RKAGHTTIDRIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG 165
>gi|448565521|ref|ZP_21636388.1| 30S ribosomal protein S3P [Haloferax prahovense DSM 18310]
gi|445715265|gb|ELZ67021.1| 30S ribosomal protein S3P [Haloferax prahovense DSM 18310]
Length = 303
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
+ A + + IM++GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 110 RKAGHTTIDRIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG 165
>gi|448508622|ref|ZP_21615573.1| 30S ribosomal protein S3P [Halorubrum distributum JCM 9100]
gi|448517695|ref|ZP_21617269.1| 30S ribosomal protein S3P [Halorubrum distributum JCM 10118]
gi|445697248|gb|ELZ49318.1| 30S ribosomal protein S3P [Halorubrum distributum JCM 9100]
gi|445705910|gb|ELZ57798.1| 30S ribosomal protein S3P [Halorubrum distributum JCM 10118]
Length = 314
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ +++RF + +++ ++V+ L A A+ L + A + + IM++G
Sbjct: 67 TELEERFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTIDRIMDAG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
A G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVD 163
>gi|374325617|ref|YP_005083814.1| 30S ribosomal protein S3 [Pyrobaculum sp. 1860]
gi|356640883|gb|AET31562.1| 30S ribosomal protein S3P [Pyrobaculum sp. 1860]
Length = 218
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 53 LRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
+R +ME+GAKG E++VSGKL +RA K G + GY + + AV H+L +
Sbjct: 127 IRQLMEAGAKGFEIVVSGKLSTERARFEKQTYGKLYKIGYDARNRVRRAVIHILLK 182
>gi|325968787|ref|YP_004244979.1| 30S ribosomal protein S3 [Vulcanisaeta moutnovskia 768-28]
gi|323707990|gb|ADY01477.1| 30S ribosomal protein S3 [Vulcanisaeta moutnovskia 768-28]
Length = 228
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 10/99 (10%)
Query: 10 PENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVS 69
P S EL + + NR A+ + R+ G+ I R IM+ GAKG EV +S
Sbjct: 91 PIQSPELNPKIIANRIAWAMTKGVKFRRAGMIAI----------RQIMDGGAKGAEVTIS 140
Query: 70 GKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
GKL ++R+ K+ G + +G+ + + V VL +
Sbjct: 141 GKLTSERSRFEKYVFGVIYKNGFDSRTKVQRFVGQVLLK 179
>gi|448569076|ref|ZP_21638488.1| 30S ribosomal protein S3P [Haloferax lucentense DSM 14919]
gi|448600505|ref|ZP_21656001.1| 30S ribosomal protein S3P [Haloferax alexandrinus JCM 10717]
gi|445725226|gb|ELZ76851.1| 30S ribosomal protein S3P [Haloferax lucentense DSM 14919]
gi|445735222|gb|ELZ86774.1| 30S ribosomal protein S3P [Haloferax alexandrinus JCM 10717]
Length = 303
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+++RF + +++ ++V+ L A A+ L + A + + IM++GA
Sbjct: 69 LEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMDAGAL 126
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 127 GAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG 165
>gi|448545980|ref|ZP_21626307.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-646]
gi|448548054|ref|ZP_21627398.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-645]
gi|448557077|ref|ZP_21632512.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-644]
gi|445703326|gb|ELZ55257.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-646]
gi|445714756|gb|ELZ66514.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-645]
gi|445714946|gb|ELZ66703.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-644]
Length = 302
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
+ A + + IM++GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 110 RKAGHTTIDRIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG 165
>gi|292656679|ref|YP_003536576.1| 30S ribosomal protein S3 [Haloferax volcanii DS2]
gi|448290683|ref|ZP_21481829.1| 30S ribosomal protein S3P [Haloferax volcanii DS2]
gi|291370935|gb|ADE03162.1| ribosomal protein S3 [Haloferax volcanii DS2]
gi|445578054|gb|ELY32469.1| 30S ribosomal protein S3P [Haloferax volcanii DS2]
Length = 304
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+++RF + +++ ++V+ L A A+ L + A + + IM++GA
Sbjct: 69 LEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMDAGAL 126
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 127 GAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG 165
>gi|448606201|ref|ZP_21658780.1| 30S ribosomal protein S3P [Haloferax sulfurifontis ATCC BAA-897]
gi|445739618|gb|ELZ91125.1| 30S ribosomal protein S3P [Haloferax sulfurifontis ATCC BAA-897]
Length = 302
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
+ A + + IM++GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 110 RKAGHTTIDRIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG 165
>gi|433420031|ref|ZP_20405417.1| 30S ribosomal protein S3P [Haloferax sp. BAB2207]
gi|432199288|gb|ELK55479.1| 30S ribosomal protein S3P [Haloferax sp. BAB2207]
Length = 303
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
+ A + + IM++GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 110 RKAGHTTIDRIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG 165
>gi|379004535|ref|YP_005260207.1| 30S ribosomal protein S3, eukaryotic/archaeal type [Pyrobaculum
oguniense TE7]
gi|375159988|gb|AFA39600.1| ribosomal protein S3, eukaryotic/archaeal type [Pyrobaculum
oguniense TE7]
Length = 220
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 49 CYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
+ +R + E+GAKG E++VSGKL +RA K G + GY K + AV HVL +
Sbjct: 123 MFAAIRQLTEAGAKGFEIVVSGKLSTERARFEKQTFGKLYKIGYDAKNRVRRAVVHVLLK 182
>gi|448611741|ref|ZP_21662171.1| 30S ribosomal protein S3P [Haloferax mucosum ATCC BAA-1512]
gi|445742502|gb|ELZ93996.1| 30S ribosomal protein S3P [Haloferax mucosum ATCC BAA-1512]
Length = 299
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
+ A + + IM++GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 110 RKAGHTTIDRIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG 165
>gi|448426501|ref|ZP_21583350.1| 30S ribosomal protein S3P [Halorubrum terrestre JCM 10247]
gi|448452129|ref|ZP_21593149.1| 30S ribosomal protein S3P [Halorubrum litoreum JCM 13561]
gi|448484340|ref|ZP_21606047.1| 30S ribosomal protein S3P [Halorubrum arcis JCM 13916]
gi|445679381|gb|ELZ31848.1| 30S ribosomal protein S3P [Halorubrum terrestre JCM 10247]
gi|445809773|gb|EMA59811.1| 30S ribosomal protein S3P [Halorubrum litoreum JCM 13561]
gi|445820115|gb|EMA69944.1| 30S ribosomal protein S3P [Halorubrum arcis JCM 13916]
Length = 314
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ +++RF + +++ ++V+ L A A+ L + A + + IM++G
Sbjct: 67 TELEERFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTIDRIMDAG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
A G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVD 163
>gi|149068843|gb|EDM18395.1| rCG40478, isoform CRA_e [Rattus norvegicus]
Length = 129
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 21/28 (75%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCA 28
+ VQKRF FPE SVELYAEKV RGL
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLWP 98
>gi|145591005|ref|YP_001153007.1| 30S ribosomal protein S3 [Pyrobaculum arsenaticum DSM 13514]
gi|145282773|gb|ABP50355.1| SSU ribosomal protein S3P [Pyrobaculum arsenaticum DSM 13514]
Length = 222
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 49 CYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
+ +R + E+GAKG E++VSGKL +RA K G + GY K + AV HVL +
Sbjct: 125 MFAAIRQLTEAGAKGFEIVVSGKLSTERARFEKQTFGKLYKIGYDAKNRVRRAVVHVLLK 184
>gi|389848011|ref|YP_006350250.1| 30S ribosomal protein S3 [Haloferax mediterranei ATCC 33500]
gi|448618108|ref|ZP_21666453.1| 30S ribosomal protein S3P [Haloferax mediterranei ATCC 33500]
gi|388245317|gb|AFK20263.1| 30S ribosomal protein S3P [Haloferax mediterranei ATCC 33500]
gi|445747663|gb|ELZ99118.1| 30S ribosomal protein S3P [Haloferax mediterranei ATCC 33500]
Length = 300
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
+ A + + IM++GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 110 RKAGHTTIDRIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG 165
>gi|448592785|ref|ZP_21651832.1| 30S ribosomal protein S3P [Haloferax elongans ATCC BAA-1513]
gi|445730811|gb|ELZ82398.1| 30S ribosomal protein S3P [Haloferax elongans ATCC BAA-1513]
Length = 300
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
+ A + + IM++GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 110 RKAGHTTIDRIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG 165
>gi|448578195|ref|ZP_21643630.1| 30S ribosomal protein S3P [Haloferax larsenii JCM 13917]
gi|445726736|gb|ELZ78352.1| 30S ribosomal protein S3P [Haloferax larsenii JCM 13917]
Length = 298
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
+ A + + IM++GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 110 RKAGHTTIDRIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEG 165
>gi|448503706|ref|ZP_21613335.1| 30S ribosomal protein S3P [Halorubrum coriense DSM 10284]
gi|445691907|gb|ELZ44090.1| 30S ribosomal protein S3P [Halorubrum coriense DSM 10284]
Length = 312
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+ +++RF + +++ ++V+ L A A+ L + A + + IM++G
Sbjct: 67 TELEERFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTIDRIMDAG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
A G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVD 163
>gi|448489446|ref|ZP_21607669.1| 30S ribosomal protein S3P [Halorubrum californiensis DSM 19288]
gi|445694818|gb|ELZ46936.1| 30S ribosomal protein S3P [Halorubrum californiensis DSM 19288]
Length = 313
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+ A + + IM++GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 110 RKAGHTTIDRIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVD 163
>gi|222480851|ref|YP_002567088.1| 30S ribosomal protein S3P [Halorubrum lacusprofundi ATCC 49239]
gi|222453753|gb|ACM58018.1| ribosomal protein S3 [Halorubrum lacusprofundi ATCC 49239]
Length = 312
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+ A + + IM++GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 110 RKAGHTTIDRIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEVVD 163
>gi|448441443|ref|ZP_21589106.1| 30S ribosomal protein S3P [Halorubrum saccharovorum DSM 1137]
gi|445688852|gb|ELZ41099.1| 30S ribosomal protein S3P [Halorubrum saccharovorum DSM 1137]
Length = 312
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+ A + + IM++GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 110 RKAGHTTIDRIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVD 163
>gi|344256720|gb|EGW12824.1| 40S ribosomal protein S3 [Cricetulus griseus]
Length = 94
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 22/31 (70%)
Query: 80 MKFKDGYMISSGYPVKEYIDSAVRHVLXRQA 110
MKF DG MI G PV Y+D+A+RHVL RQ
Sbjct: 1 MKFVDGLMIHCGDPVNYYVDTAMRHVLLRQG 31
>gi|448535702|ref|ZP_21622222.1| 30S ribosomal protein S3P [Halorubrum hochstenium ATCC 700873]
gi|445703203|gb|ELZ55138.1| 30S ribosomal protein S3P [Halorubrum hochstenium ATCC 700873]
Length = 312
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+ A + + IM++GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 110 RKAGHTTIDRIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVD 163
>gi|448436258|ref|ZP_21587059.1| 30S ribosomal protein S3P [Halorubrum tebenquichense DSM 14210]
gi|445682926|gb|ELZ35336.1| 30S ribosomal protein S3P [Halorubrum tebenquichense DSM 14210]
Length = 312
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+ A + + IM++GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 110 RKAGHTTIDRIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVD 163
>gi|148684440|gb|EDL16387.1| ribosomal protein S3, isoform CRA_b [Mus musculus]
Length = 129
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 21/28 (75%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCA 28
+ VQKRF FPE SVELYAEKV RGL
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRGLWP 98
>gi|448726788|ref|ZP_21709180.1| 30S ribosomal protein S3P [Halococcus morrhuae DSM 1307]
gi|445793834|gb|EMA44405.1| 30S ribosomal protein S3P [Halococcus morrhuae DSM 1307]
Length = 370
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 14/90 (15%)
Query: 10 PENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVS 69
P+ + ++ A+++ N A+ + RK G + + IM++GA+G E+ ++
Sbjct: 88 PDLNAQIVADRLGN----ALERGWYFRKAG----------HTTIDRIMDAGARGAEITLN 133
Query: 70 GKLRAQRATSMKFKDGYMISSGYPVKEYID 99
GK+ R+ + KF GY+ +G P +E +D
Sbjct: 134 GKVTGARSRNEKFNRGYIKHNGEPSQEIVD 163
>gi|448460071|ref|ZP_21596991.1| 30S ribosomal protein S3P [Halorubrum lipolyticum DSM 21995]
gi|445807789|gb|EMA57870.1| 30S ribosomal protein S3P [Halorubrum lipolyticum DSM 21995]
Length = 314
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+ A + + IM++GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 110 RKAGHTTIDRIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVD 163
>gi|374633062|ref|ZP_09705429.1| ribosomal protein S3, eukaryotic/archaeal type [Metallosphaera
yellowstonensis MK1]
gi|373524546|gb|EHP69423.1| ribosomal protein S3, eukaryotic/archaeal type [Metallosphaera
yellowstonensis MK1]
Length = 231
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAV 102
A + +R IM +GA G EVIVSGK+ ++RA K K+G + +G + +D A+
Sbjct: 113 AAFITIRRIMNAGALGAEVIVSGKITSERAKFEKLKEGIVYKTGNSLDVMVDRAI 167
>gi|448463236|ref|ZP_21598014.1| 30S ribosomal protein S3P [Halorubrum kocurii JCM 14978]
gi|445817231|gb|EMA67107.1| 30S ribosomal protein S3P [Halorubrum kocurii JCM 14978]
Length = 312
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+ A + + IM++GA G E+++SGK+ R+ KF GY+ +G P +E +D
Sbjct: 110 RKAGHTTIDRIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVD 163
>gi|148642816|ref|YP_001273329.1| 30S ribosomal protein S3P [Methanobrevibacter smithii ATCC 35061]
gi|222445047|ref|ZP_03607562.1| hypothetical protein METSMIALI_00664 [Methanobrevibacter smithii
DSM 2375]
gi|261350384|ref|ZP_05975801.1| ribosomal protein S3 [Methanobrevibacter smithii DSM 2374]
gi|172048064|sp|A5UL83.1|RS3_METS3 RecName: Full=30S ribosomal protein S3
gi|148551833|gb|ABQ86961.1| ribosomal protein S3p [Methanobrevibacter smithii ATCC 35061]
gi|222434612|gb|EEE41777.1| ribosomal protein S3 [Methanobrevibacter smithii DSM 2375]
gi|288861167|gb|EFC93465.1| ribosomal protein S3 [Methanobrevibacter smithii DSM 2374]
Length = 250
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 49 CYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYP 93
Y +R IM +GA+G EV +SGK+R R+ KF +GY+ G P
Sbjct: 112 AYSTIRRIMGAGAQGVEVTISGKIRGSRSAVAKFVEGYIKKCGEP 156
>gi|330835819|ref|YP_004410547.1| 30S ribosomal protein S3P [Metallosphaera cuprina Ar-4]
gi|329567958|gb|AEB96063.1| 30S ribosomal protein S3P [Metallosphaera cuprina Ar-4]
Length = 239
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAV 102
A + +R IM +GA G EVIVSGK+ ++RA K K+G + +G + +D A+
Sbjct: 113 AAFITIRKIMNAGALGAEVIVSGKITSERAKFEKLKEGIVYKTGNGLDVMVDRAI 167
>gi|448329365|ref|ZP_21518665.1| 30S ribosomal protein S3P [Natrinema versiforme JCM 10478]
gi|445614104|gb|ELY67785.1| 30S ribosomal protein S3P [Natrinema versiforme JCM 10478]
Length = 322
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 1 SAVQKRFKF--PENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIME 58
+A+++RF P+ V+ E N + A A +L + + A + + IME
Sbjct: 67 TALEERFNLEDPQIDVQEVEEPDLNARIVADRLANALER----GWYFRKAGHTTIDRIME 122
Query: 59 SGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+GA G E+++SGK+ R+ KF GY+ +G P + +D
Sbjct: 123 AGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAETVVD 163
>gi|409731018|ref|ZP_11272568.1| 30S ribosomal protein S3P [Halococcus hamelinensis 100A6]
gi|448724776|ref|ZP_21707281.1| 30S ribosomal protein S3P [Halococcus hamelinensis 100A6]
gi|445784985|gb|EMA35781.1| 30S ribosomal protein S3P [Halococcus hamelinensis 100A6]
Length = 366
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 15 ELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKLRA 74
+L A+ V +R A+ + RK G + + IM++GA+G E+ ++GK+
Sbjct: 89 DLNAQIVADRLANALERGWYFRKAG----------HTTIDRIMDAGARGAEITLNGKVTG 138
Query: 75 QRATSMKFKDGYMISSGYPVKEYID 99
R+ KF GY+ +G P K+ +D
Sbjct: 139 ARSRDEKFNRGYIKHNGEPSKDIVD 163
>gi|336121751|ref|YP_004576526.1| 30S ribosomal protein S3 [Methanothermococcus okinawensis IH1]
gi|334856272|gb|AEH06748.1| ribosomal protein S3 [Methanothermococcus okinawensis IH1]
Length = 219
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 49 CYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYP 93
+ +R +M +GAKG +I+SGKL +R+ + KF +GYM G P
Sbjct: 112 AHSAVRRVMGAGAKGIVIIISGKLTGERSRTEKFMEGYMKHCGEP 156
>gi|327311857|ref|YP_004338754.1| 30S ribosomal protein S3 [Thermoproteus uzoniensis 768-20]
gi|326948336|gb|AEA13442.1| 30S ribosomal protein S3P [Thermoproteus uzoniensis 768-20]
Length = 194
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 53 LRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
+R + E+GA+G E+++SGKL +RA K+K G + +G + + SAV HVL +
Sbjct: 105 IRQVTEAGARGFELVISGKLSTERAKFEKYKIGKVYKTGADSTKTMRSAVVHVLLK 160
>gi|307594499|ref|YP_003900816.1| 30S ribosomal protein S3 [Vulcanisaeta distributa DSM 14429]
gi|307549700|gb|ADN49765.1| ribosomal protein S3 [Vulcanisaeta distributa DSM 14429]
Length = 228
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 10/99 (10%)
Query: 10 PENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVS 69
P + EL + + NR A+ + R+ G+ I R IM+ GAKG EV +S
Sbjct: 91 PIQNPELNPKIIANRIAWAMTKGVKFRRAGMIAI----------RQIMDGGAKGAEVTIS 140
Query: 70 GKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
GKL ++R+ K+ G + +G+ + + V VL +
Sbjct: 141 GKLTSERSRFEKYIYGTIYKNGFDSRTKVQRFVGQVLLK 179
>gi|407464758|ref|YP_006775640.1| 30S ribosomal protein S3 [Candidatus Nitrosopumilus sp. AR2]
gi|407047946|gb|AFS82698.1| 30S ribosomal protein S3 [Candidatus Nitrosopumilus sp. AR2]
Length = 262
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHV 105
A L+ IME GA G ++ +SGKLR R+ K G + +G+ + +D + HV
Sbjct: 112 ATMWTLKQIMEGGAMGVQITISGKLRGDRSAFEKHTQGILPRAGHHAEIVVDEDIAHV 169
>gi|14520552|ref|NP_126027.1| 30S ribosomal protein S3P [Pyrococcus abyssi GE5]
gi|17367830|sp|Q9V1U1.1|RS3_PYRAB RecName: Full=30S ribosomal protein S3
gi|5457768|emb|CAB49258.1| rps3P SSU ribosomal protein S3P [Pyrococcus abyssi GE5]
gi|380741079|tpe|CCE69713.1| TPA: 30S ribosomal protein S3P [Pyrococcus abyssi GE5]
Length = 210
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 56 IMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
IM +GA+G E+ +SGKL +RA S++F GY+ G P + + L +
Sbjct: 120 IMSNGARGVEIRISGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLK 172
>gi|389853111|ref|YP_006355345.1| 30S ribosomal protein S3 [Pyrococcus sp. ST04]
gi|388250417|gb|AFK23270.1| rpsC, small subunit ribosomal protein S3 [Pyrococcus sp. ST04]
Length = 210
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 56 IMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
IM +GA+G E+ +SGKL +RA S++F GY+ G P + + L +
Sbjct: 120 IMNNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLK 172
>gi|329765063|ref|ZP_08256647.1| ribosomal protein S3 [Candidatus Nitrosoarchaeum limnia SFB1]
gi|393796604|ref|ZP_10379968.1| 30S ribosomal protein S3 [Candidatus Nitrosoarchaeum limnia BG20]
gi|329138440|gb|EGG42692.1| ribosomal protein S3 [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 251
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHV 105
A L+ IME+GA G ++ +SGKLR R+ K G + +G+ + +D + HV
Sbjct: 112 ATMWTLKQIMENGAMGVQITISGKLRGDRSAFEKHTAGILPRAGHHAEVIVDEDIAHV 169
>gi|18978191|ref|NP_579548.1| 30S ribosomal protein S3 [Pyrococcus furiosus DSM 3638]
gi|397652533|ref|YP_006493114.1| 30S ribosomal protein S3 [Pyrococcus furiosus COM1]
gi|27734507|sp|Q8U004.1|RS3_PYRFU RecName: Full=30S ribosomal protein S3
gi|428697931|pdb|3J20|C Chain C, Promiscuous Behavior Of Proteins In Archaeal Ribosomes
Revealed By Cryo-em: Implications For Evolution Of
Eukaryotic Ribosomes (30s Ribosomal Subunit)
gi|18894000|gb|AAL81943.1| SSU ribosomal protein S3P [Pyrococcus furiosus DSM 3638]
gi|393190124|gb|AFN04822.1| 30S ribosomal protein S3P [Pyrococcus furiosus COM1]
Length = 210
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 56 IMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
IM +GA+G E+ +SGKL +RA S++F GY+ G P + + L +
Sbjct: 120 IMNNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLK 172
>gi|300710381|ref|YP_003736195.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
gi|448294705|ref|ZP_21484784.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
gi|299124064|gb|ADJ14403.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
gi|445586382|gb|ELY40664.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
Length = 302
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAV 102
+ A + + IM++GA G E+++SGK+ R+ KF GY+ +G P ++ +D +
Sbjct: 110 RKAGHTTIDRIMDAGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEDIVDKGL 166
>gi|322372162|ref|ZP_08046703.1| 30S ribosomal protein S3P [Haladaptatus paucihalophilus DX253]
gi|320548171|gb|EFW89844.1| 30S ribosomal protein S3P [Haladaptatus paucihalophilus DX253]
Length = 320
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+ A + + IM+SGA G E+++SGK+ R+ KF GY+ +G P + +D
Sbjct: 110 RKAGHTTIDRIMDSGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQTIVD 163
>gi|332158018|ref|YP_004423297.1| 30S ribosomal protein S3P [Pyrococcus sp. NA2]
gi|331033481|gb|AEC51293.1| 30S ribosomal protein S3P [Pyrococcus sp. NA2]
Length = 210
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 56 IMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
IM +GA+G E+ +SGKL +RA S++F GY+ G P + + L +
Sbjct: 120 IMNNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLK 172
>gi|307006559|gb|ADN23564.1| 40S ribosomal protein S3 [Hyalomma marginatum rufipes]
Length = 91
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 82 FKDGYMISSGYPVKEYIDSAVRHVLXRQ 109
F DG MI SG P +Y+++AVRHVL RQ
Sbjct: 1 FVDGLMIHSGEPTNDYVETAVRHVLLRQ 28
>gi|448737868|ref|ZP_21719901.1| 30S ribosomal protein S3P [Halococcus thailandensis JCM 13552]
gi|445802830|gb|EMA53131.1| 30S ribosomal protein S3P [Halococcus thailandensis JCM 13552]
Length = 383
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 14/90 (15%)
Query: 10 PENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVS 69
P+ + ++ A+++ N A+ + RK G + + IM++GA+G E+ ++
Sbjct: 88 PDLNAQIVADRLGN----ALERGWYFRKAG----------HTTIDRIMDAGARGAEITLN 133
Query: 70 GKLRAQRATSMKFKDGYMISSGYPVKEYID 99
GK+ R+ + KF GY+ +G P ++ +D
Sbjct: 134 GKVTGARSRNEKFNRGYIKHNGEPSQDIVD 163
>gi|337283650|ref|YP_004623124.1| 30S ribosomal protein S3P [Pyrococcus yayanosii CH1]
gi|334899584|gb|AEH23852.1| 30S ribosomal protein S3P [Pyrococcus yayanosii CH1]
Length = 210
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 56 IMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
IM +GA+G E+ +SGKL +RA S++F GY+ G P + + L +
Sbjct: 120 IMNNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLK 172
>gi|159163349|pdb|1WH9|A Chain A, Solution Structure Of The Kh Domain Of Human Ribosomal
Protein S3
Length = 92
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/23 (82%), Positives = 19/23 (82%)
Query: 3 VQKRFKFPENSVELYAEKVNNRG 25
VQKRF FPE SVELYAEKV RG
Sbjct: 64 VQKRFGFPEGSVELYAEKVATRG 86
>gi|448735129|ref|ZP_21717346.1| 30S ribosomal protein S3P [Halococcus salifodinae DSM 8989]
gi|445798742|gb|EMA49133.1| 30S ribosomal protein S3P [Halococcus salifodinae DSM 8989]
Length = 372
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 14/90 (15%)
Query: 10 PENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVS 69
P+ + ++ A+++ N A+ + RK G + + IM++GA+G E+ ++
Sbjct: 88 PDLNAQIVADRLGN----ALERGWYFRKAG----------HTTIDRIMDAGARGAEITLN 133
Query: 70 GKLRAQRATSMKFKDGYMISSGYPVKEYID 99
GK+ R+ + KF GY+ +G P + +D
Sbjct: 134 GKVTGARSRNEKFNRGYIKHNGEPAQSIVD 163
>gi|448730383|ref|ZP_21712691.1| 30S ribosomal protein S3P [Halococcus saccharolyticus DSM 5350]
gi|445793551|gb|EMA44123.1| 30S ribosomal protein S3P [Halococcus saccharolyticus DSM 5350]
Length = 372
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 14/90 (15%)
Query: 10 PENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVS 69
P+ + ++ A+++ N A+ + RK G + + IM++GA+G E+ ++
Sbjct: 88 PDLNAQIVADRLGN----ALERGWYFRKAG----------HTTIDRIMDAGARGAEITLN 133
Query: 70 GKLRAQRATSMKFKDGYMISSGYPVKEYID 99
GK+ R+ + KF GY+ +G P + +D
Sbjct: 134 GKVTGARSRNEKFNRGYIKHNGEPAQSIVD 163
>gi|433590200|ref|YP_007279696.1| ribosomal protein S3, eukaryotic/archaeal type [Natrinema
pellirubrum DSM 15624]
gi|448332394|ref|ZP_21521638.1| 30S ribosomal protein S3P [Natrinema pellirubrum DSM 15624]
gi|433304980|gb|AGB30792.1| ribosomal protein S3, eukaryotic/archaeal type [Natrinema
pellirubrum DSM 15624]
gi|445627498|gb|ELY80822.1| 30S ribosomal protein S3P [Natrinema pellirubrum DSM 15624]
Length = 316
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
+ A + + IME+GA G E+++SGK+ R+ KF GY+ +G P + +D
Sbjct: 110 RKAGHTTIDRIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAETVVDHG 165
>gi|448386095|ref|ZP_21564303.1| 30S ribosomal protein S3P [Haloterrigena thermotolerans DSM 11522]
gi|445655993|gb|ELZ08835.1| 30S ribosomal protein S3P [Haloterrigena thermotolerans DSM 11522]
Length = 312
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
+ A + + IME+GA G E+++SGK+ R+ KF GY+ +G P + +D
Sbjct: 110 RKAGHTTIDRIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAETVVDHG 165
>gi|386876664|ref|ZP_10118757.1| ribosomal protein S3 [Candidatus Nitrosopumilus salaria BD31]
gi|386805532|gb|EIJ65058.1| ribosomal protein S3 [Candidatus Nitrosopumilus salaria BD31]
Length = 251
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHV 105
A L+ IME GA G ++ +SGKLR R+ K G + +G+ + +D + HV
Sbjct: 112 ATMWTLKQIMEGGAMGVQITISGKLRGDRSAFEKHTAGILPRAGHHAEVIVDEDIAHV 169
>gi|347527|gb|AAA18095.1| ribosomal protein S3, partial [Homo sapiens]
Length = 95
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/25 (76%), Positives = 20/25 (80%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRG 25
+ VQKRF FPE SVELYAEKV RG
Sbjct: 71 AVVQKRFGFPEGSVELYAEKVATRG 95
>gi|340344786|ref|ZP_08667918.1| Ribosomal protein S3 [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519927|gb|EGP93650.1| Ribosomal protein S3 [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 251
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHV 105
A L+ IM++GA G ++ +SGKLR R+ K G + +G+ + +D + HV
Sbjct: 112 ATMWTLKQIMDNGAMGVQITISGKLRGDRSAFEKHSAGILPRAGHHAEVIVDEDIAHV 169
>gi|345005649|ref|YP_004808502.1| 30S ribosomal protein S3 [halophilic archaeon DL31]
gi|344321275|gb|AEN06129.1| ribosomal protein S3 [halophilic archaeon DL31]
Length = 312
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
S +++RF + +++ ++V+ L A A+ L + A + + +ME+G
Sbjct: 67 SELEERFGMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTIDRMMEAG 124
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
A G E+++SGK+ R+ KF GY+ +G P + +D
Sbjct: 125 ALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQTVVDEG 165
>gi|268323281|emb|CBH36869.1| putative 30S ribosomal protein S3P [uncultured archaeon]
Length = 234
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 10 PENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVS 69
P + EL A+ ++NR I + R+ G + L+ IM +GA GCE+ +S
Sbjct: 83 PIAAPELSAQLMSNRLAKLIERGWHFRRAGRST----------LQRIMGAGALGCEITMS 132
Query: 70 GKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
GKLR R K +GY+ G +E +D
Sbjct: 133 GKLRGPRGRVEKMVEGYIKHCGSVAEEIVDKG 164
>gi|77024944|gb|ABA61371.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
HF70_59C08]
Length = 269
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+ A + L IM++GAKGC V++SGKL R + KF+ G++ G +++D
Sbjct: 113 RRAGHSSLLNIMDAGAKGCLVVLSGKLTGSRNRTQKFQAGHIKYCGDTAIQFMD 166
>gi|212223217|ref|YP_002306453.1| 30S ribosomal protein S3 [Thermococcus onnurineus NA1]
gi|254764554|sp|B6YSL9.1|RS3_THEON RecName: Full=30S ribosomal protein S3
gi|212008174|gb|ACJ15556.1| SSU ribosomal protein S3P; (rps3P) [Thermococcus onnurineus NA1]
Length = 208
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 57 MESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
M +GA+G E+ +SGKL +RA S++F GY+ G P + + L +
Sbjct: 121 MRNGARGVEIRISGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLK 172
>gi|170516818|gb|ACB15220.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
DeepAnt-15E7]
Length = 258
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+ A +G + IM++GA+GC V++SGK+ R KF+ G++ G E++D
Sbjct: 113 RRAGHGTAQQIMDAGARGCLVVLSGKITGARHRVEKFQQGHIKFCGETALEFMD 166
>gi|159041478|ref|YP_001540730.1| 30S ribosomal protein S3 [Caldivirga maquilingensis IC-167]
gi|157920313|gb|ABW01740.1| ribosomal protein S3- domain protein [Caldivirga maquilingensis
IC-167]
Length = 236
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 53 LRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQASS 112
LR + E+ +G EVI+SGKL +R+ K+ G +I +G E + AV VL +
Sbjct: 125 LRQLQEANVQGAEVIISGKLTTERSRFEKYTTGIVIKAGQDALEKVQEAVIPVLLK--PG 182
Query: 113 IFCGYVKI 120
IF V++
Sbjct: 183 IFSVRVRV 190
>gi|315229862|ref|YP_004070298.1| 30S ribosomal protein S3e (S3p) [Thermococcus barophilus MP]
gi|315182890|gb|ADT83075.1| SSU ribosomal protein S3e (S3p) [Thermococcus barophilus MP]
Length = 207
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 57 MESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
M +GA+G E+ +SGKL +RA S++F GY+ G P + + L +
Sbjct: 121 MRNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLK 172
>gi|448415413|ref|ZP_21578213.1| 30S ribosomal protein S3P [Halosarcina pallida JCM 14848]
gi|445681071|gb|ELZ33512.1| 30S ribosomal protein S3P [Halosarcina pallida JCM 14848]
Length = 343
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
+ A + + IM++GA G E+I++GK+ R+ KF GY+ +G P + +D
Sbjct: 110 RKAGHTTIDRIMDAGALGAEIILAGKVTGARSRVEKFNRGYIKHNGEPAQSIVD 163
>gi|375083288|ref|ZP_09730314.1| 30S ribosomal protein S3P [Thermococcus litoralis DSM 5473]
gi|374742019|gb|EHR78431.1| 30S ribosomal protein S3P [Thermococcus litoralis DSM 5473]
Length = 207
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 57 MESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
M +GA+G E+ +SGKL +RA S++F GY+ G P + + L +
Sbjct: 121 MNNGARGVEIRISGKLTGERAKSVRFYQGYIAKVGNPAETLVSRGYAQALLK 172
>gi|193083750|gb|ACF09437.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
SAT1000-15-B12]
Length = 259
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
+ A + + IM++GA+GC VI+SGK+ R KF+ G++ G E++D+
Sbjct: 113 RRAGHSTAQNIMDAGARGCLVILSGKITGPRHRVEKFQQGHVKFCGETALEFMDTG 168
>gi|399577352|ref|ZP_10771105.1| rps3 protein [Halogranum salarium B-1]
gi|399237735|gb|EJN58666.1| rps3 protein [Halogranum salarium B-1]
Length = 309
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+Q+RF + +++ ++V+ L A A+ L + A + + IM++GA
Sbjct: 69 LQERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMDAGAL 126
Query: 63 GCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
G E++++GK+ R+ KF GY+ +G P +D
Sbjct: 127 GAEIVLAGKVTGARSRIEKFNRGYIKHNGEPADTVVDEG 165
>gi|242398285|ref|YP_002993709.1| 30S ribosomal protein S3P [Thermococcus sibiricus MM 739]
gi|259495260|sp|C6A165.1|RS3_THESM RecName: Full=30S ribosomal protein S3
gi|242264678|gb|ACS89360.1| 30S ribosomal protein S3P [Thermococcus sibiricus MM 739]
Length = 207
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 57 MESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYI 98
M +GA+G E+ +SGKL +RA S++F GY+ G P + +
Sbjct: 121 MSNGARGVEIRISGKLTGERAKSVRFYQGYIAKVGNPAETLV 162
>gi|193084311|gb|ACF09970.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
KM3-130-D10]
Length = 367
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
+ A + + IM++GA+GC VI+SGK+ R KF+ G++ G E++D+
Sbjct: 113 RRAGHSTAQNIMDAGARGCLVILSGKITGPRHRVEKFQQGHIKFCGETALEFMDTG 168
>gi|352682734|ref|YP_004893258.1| 30S ribosomal protein S3p [Thermoproteus tenax Kra 1]
gi|350275533|emb|CCC82180.1| 30S ribosomal protein S3p [Thermoproteus tenax Kra 1]
Length = 216
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 49 CYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
+ +R + E+GA+G E+++SGKL +RA K+K G + SG + + A HVL +
Sbjct: 123 AFVAVRQVTEAGARGFELVISGKLSTERAKFEKYKVGKVYKSGNDSMKTVRRAAVHVLLK 182
>gi|193084211|gb|ACF09875.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
KM3-136-D10]
Length = 400
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 3 VQKRFK--FPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+Q+R + F + +L E++ N L A A L + A + + ++E+G
Sbjct: 72 LQRRIRTDFNLENPKLQVEEIENPALNAQVMASKLASALERGWYFRRAGHSSVLNVIEAG 131
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXRQASSI 113
AKGC +I++GKL R + KF G++ G ++A+ H+ QA+++
Sbjct: 132 AKGCLIIIAGKLTGSRHRTEKFLKGHIKFCG-------ETALTHMDVGQATAV 177
>gi|385805558|ref|YP_005841956.1| 30S ribosomal protein S3 [Fervidicoccus fontis Kam940]
gi|383795421|gb|AFH42504.1| 30S ribosomal protein S3P [Fervidicoccus fontis Kam940]
Length = 251
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 49 CYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLXR 108
+ LR IM +GA G E+I+SGK+ ++RA KF+ G + +G +D AV H L +
Sbjct: 114 AFAALRRIMAAGAAGAEIIISGKITSERARYEKFRAGKIYKTGEQATYIVDKAVAHALLK 173
>gi|407462398|ref|YP_006773715.1| 30S ribosomal protein S3 [Candidatus Nitrosopumilus koreensis AR1]
gi|407046020|gb|AFS80773.1| 30S ribosomal protein S3 [Candidatus Nitrosopumilus koreensis AR1]
Length = 251
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHV 105
A L+ IME+GA G ++ +SGKLR R+ K G + +G+ + + + HV
Sbjct: 112 ATMWTLKQIMENGAMGVQITISGKLRGDRSAFEKHTAGILPRAGHHAEVIVAEDIAHV 169
>gi|161528312|ref|YP_001582138.1| 30S ribosomal protein S3 [Nitrosopumilus maritimus SCM1]
gi|160339613|gb|ABX12700.1| ribosomal protein S3 [Nitrosopumilus maritimus SCM1]
Length = 251
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 48 ACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHV 105
A L+ IME+GA G ++ +SGKLR R+ K G + +G+ + + + HV
Sbjct: 112 ATMWTLKQIMENGAMGVQITISGKLRGDRSAFEKHTAGILPRAGHHAEVIVAEDIAHV 169
>gi|193083860|gb|ACF09541.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
KM3-85-F5]
Length = 231
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 3 VQKRFKF--PENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+Q+ FK P+ VE + N + A A SL + + A + ++ IM++G
Sbjct: 71 LQEDFKLTNPQLEVEEIEDSRINAQVMASRLASSLERGWF----FRRAGHSTVQNIMDAG 126
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
A+GC VI+SGK+ R KF+ G++ G +++D
Sbjct: 127 ARGCIVILSGKITGARHRVEKFQKGHIKYCGETALQFMD 165
>gi|47079410|gb|AAT10153.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
DeepAnt-JyKC7]
Length = 307
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 46 KMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSA 101
+ A + + IM++GA+GC +I+SGK+ R KF+ G++ G +++D
Sbjct: 114 RRAGHSTAQNIMDAGARGCLIILSGKISGPRHRVQKFQQGHIKFCGETALQFMDEG 169
>gi|426375157|ref|XP_004054412.1| PREDICTED: 40S ribosomal protein S3-like [Gorilla gorilla
gorilla]
Length = 110
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/22 (77%), Positives = 18/22 (81%)
Query: 1 SAVQKRFKFPENSVELYAEKVN 22
+ VQKRF FPE SVELYAEK N
Sbjct: 71 AVVQKRFGFPEGSVELYAEKCN 92
>gi|152060885|sp|Q74MZ4.2|RS3_NANEQ RecName: Full=30S ribosomal protein S3
Length = 230
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 53 LRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSG 91
L IM +GA G E++++G+L QR + +FK G + +G
Sbjct: 117 LETIMNAGAIGAEIVIAGRLSGQRGKTWRFKAGNLRKTG 155
>gi|41615265|ref|NP_963763.1| hypothetical protein NEQ481 [Nanoarchaeum equitans Kin4-M]
gi|40068989|gb|AAR39324.1| NEQ481 [Nanoarchaeum equitans Kin4-M]
Length = 236
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 53 LRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSG 91
L IM +GA G E++++G+L QR + +FK G + +G
Sbjct: 123 LETIMNAGAIGAEIVIAGRLSGQRGKTWRFKAGNLRKTG 161
>gi|255513430|gb|EET89696.1| ribosomal protein S3- domain protein [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 207
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 53 LRFIMESGAKGCEVIVSGKLRAQ--RATSMKFKDGYMISSG 91
L+ IME+GA G E+I+SGKL A+ RA S++ GY+ +G
Sbjct: 117 LKSIMENGALGAEIIISGKLAAKGARAKSIRKSVGYIPKAG 157
>gi|328951230|ref|YP_004368565.1| 30S ribosomal protein S3 [Marinithermus hydrothermalis DSM 14884]
gi|328451554|gb|AEB12455.1| ribosomal protein S3 [Marinithermus hydrothermalis DSM 14884]
Length = 247
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 3 VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAK 62
+QKRF P ++ L ++V N L A A+ + ++ + A ++ +ME+GA+
Sbjct: 91 LQKRF--PNRTISLNVQEVPNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMEAGAQ 148
Query: 63 GCEVIVSGKL 72
G +V+VSG++
Sbjct: 149 GAKVVVSGRI 158
>gi|359416222|ref|ZP_09208574.1| 30S ribosomal protein S3P [Candidatus Haloredivivus sp. G17]
gi|358033425|gb|EHK01978.1| 30S ribosomal protein S3P [Candidatus Haloredivivus sp. G17]
Length = 351
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 1 SAVQKRFKF--PENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIME 58
SA+++ F F P+ V + + + A + A+ L K G K Y +R + E
Sbjct: 66 SALEEEFDFENPQIEVNEIEDADGDAQVVADSIADWLEKGGH----VKRVGYTYVRRMKE 121
Query: 59 SGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYI 98
+G G EV ++GKL R + KF GY+ G KE +
Sbjct: 122 AGVIGAEVEITGKLSGNRGRTEKFSFGYVKRCGNTSKENV 161
>gi|291333640|gb|ADD93331.1| ribosomal protein S3 [uncultured archaeon MedDCM-OCT-S11-C441]
Length = 218
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 3 VQKRFKF--PENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESG 60
+Q+ F P+ VE E N + A A SL + + A + ++ IM++G
Sbjct: 71 LQEDFDLDNPQLEVEEIEESRTNAQVMASRLASSLERGWF----FRRAGHSTVQNIMDAG 126
Query: 61 AKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYID 99
A+GC V +SGK+ R KF+ G++ G + +D
Sbjct: 127 ARGCIVTLSGKITGARHRVEKFQKGHIKYCGETALQLMD 165
>gi|170066762|ref|XP_001868214.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167862957|gb|EDS26340.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 222
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 6/35 (17%)
Query: 1 SAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESL 35
+ V+KRF +EL AEKV R LCAIAQAESL
Sbjct: 60 AVVKKRF------IELNAEKVATRSLCAIAQAESL 88
>gi|124268398|ref|YP_001022402.1| ribonucleotide-diphosphate reductase subunit alpha [Methylibium
petroleiphilum PM1]
gi|124261173|gb|ABM96167.1| Ribonucleoside-diphosphate reductase [Methylibium petroleiphilum
PM1]
Length = 971
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 34 SLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYP 93
+L G + VC + + + +M GA+G E I KLR +T+M+ D + + Y
Sbjct: 588 TLNTNGSEIAVCNLGSVNLAQHLMH-GAEGLE-IDHAKLRKTVSTAMRMLDNVIDINYYA 645
Query: 94 VKEYIDSAVRH 104
VK+ DS +RH
Sbjct: 646 VKKARDSNLRH 656
>gi|313680509|ref|YP_004058248.1| 30S ribosomal protein S3 [Oceanithermus profundus DSM 14977]
gi|313153224|gb|ADR37075.1| SSU ribosomal protein S3P [Oceanithermus profundus DSM 14977]
Length = 247
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 9 FPENSVELYAEKVNNRGLCAIAQAESLRKEGLAVIVCKMACYGVLRFIMESGAKGCEVIV 68
FP ++ L ++V N L A A+ + ++ + A ++ ++ESGA+G +V+V
Sbjct: 95 FPNRTIALNVQEVGNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVVESGAQGAKVVV 154
Query: 69 SGKL-RAQRATSMKFKDG 85
SG++ A++A + DG
Sbjct: 155 SGRIGGAEQARTEWSSDG 172
>gi|433460064|ref|ZP_20417700.1| histidine ammonia-lyase [Halobacillus sp. BAB-2008]
gi|432192180|gb|ELK49093.1| histidine ammonia-lyase [Halobacillus sp. BAB-2008]
Length = 520
Score = 34.7 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 37 KEGLAVI--VCKMACYGVLRFI-MESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYP 93
KEGLA+I M GV++FI E A C+ I S ++A F + GYP
Sbjct: 187 KEGLALINGTQAMTAVGVIQFIESERLALQCDWISSMTMQALEGVRDAFHPSIHAARGYP 246
Query: 94 VKEYIDSAVRHVL 106
+E + +RH++
Sbjct: 247 EQEEVAERIRHLI 259
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.135 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,544,385,367
Number of Sequences: 23463169
Number of extensions: 48730850
Number of successful extensions: 108348
Number of sequences better than 100.0: 865
Number of HSP's better than 100.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 107472
Number of HSP's gapped (non-prelim): 871
length of query: 120
length of database: 8,064,228,071
effective HSP length: 87
effective length of query: 33
effective length of database: 6,022,932,368
effective search space: 198756768144
effective search space used: 198756768144
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 69 (31.2 bits)