Query 046476
Match_columns 376
No_of_seqs 135 out of 1519
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 22:07:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046476.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046476hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asc_A Kelch repeat and BTB do 99.1 4.3E-08 1.5E-12 90.0 24.4 202 103-344 68-283 (315)
2 2woz_A Kelch repeat and BTB do 99.1 2.9E-08 1E-12 91.2 23.0 201 104-344 80-293 (318)
3 3ii7_A Kelch-like protein 7; p 99.1 3.3E-08 1.1E-12 90.3 22.5 204 102-346 70-280 (306)
4 2vpj_A Kelch-like protein 12; 99.1 5.3E-08 1.8E-12 88.6 23.3 202 102-345 78-285 (301)
5 1zgk_A Kelch-like ECH-associat 99.0 4.6E-08 1.6E-12 89.5 23.0 204 102-347 90-296 (308)
6 2xn4_A Kelch-like protein 2; s 99.0 3.7E-08 1.3E-12 89.8 21.3 202 102-345 77-283 (302)
7 2e31_A FBS1, F-box only protei 99.0 1.2E-10 4E-15 105.0 3.1 49 5-55 50-99 (297)
8 1fs1_A SKP2 F-BOX, cyclin A/CD 99.0 1.4E-10 4.7E-15 77.1 2.4 41 6-48 9-49 (53)
9 4asc_A Kelch repeat and BTB do 98.9 1.2E-07 4E-12 87.0 20.7 155 179-345 67-228 (315)
10 2vpj_A Kelch-like protein 12; 98.9 2E-07 7E-12 84.7 22.0 201 102-345 31-238 (301)
11 3ii7_A Kelch-like protein 7; p 98.9 1.1E-07 3.9E-12 86.6 19.7 203 101-345 23-232 (306)
12 2uvk_A YJHT; unknown function, 98.9 6.7E-08 2.3E-12 90.3 18.3 225 91-347 19-303 (357)
13 2xn4_A Kelch-like protein 2; s 98.9 2.2E-07 7.5E-12 84.6 20.4 203 102-345 30-236 (302)
14 1zgk_A Kelch-like ECH-associat 98.8 1.4E-07 4.9E-12 86.2 17.2 205 102-345 39-247 (308)
15 2woz_A Kelch repeat and BTB do 98.8 3.9E-07 1.3E-11 83.6 18.5 155 179-345 78-238 (318)
16 2ovr_B FBW7, F-BOX/WD repeat p 98.7 8.6E-06 2.9E-10 77.9 26.3 47 6-54 19-65 (445)
17 3v7d_B Cell division control p 98.6 1.9E-05 6.6E-10 75.7 25.7 43 7-51 16-59 (464)
18 1p22_A F-BOX/WD-repeat protein 98.6 1E-05 3.6E-10 77.2 23.1 45 7-53 12-60 (435)
19 2zwa_A Leucine carboxyl methyl 98.5 3.3E-06 1.1E-10 86.1 17.5 157 178-346 467-643 (695)
20 2uvk_A YJHT; unknown function, 98.4 2.1E-05 7.3E-10 73.1 19.6 156 178-344 167-348 (357)
21 1k3i_A Galactose oxidase precu 97.7 0.00079 2.7E-08 68.0 16.2 204 103-345 220-448 (656)
22 3l2o_B F-box only protein 4; s 97.7 9.8E-06 3.3E-10 72.2 1.8 49 7-57 6-54 (312)
23 2zwa_A Leucine carboxyl methyl 97.7 0.00091 3.1E-08 68.1 15.9 158 178-346 411-591 (695)
24 1k3i_A Galactose oxidase precu 97.5 0.00067 2.3E-08 68.5 13.0 152 179-343 219-383 (656)
25 2ast_B S-phase kinase-associat 97.4 4.9E-05 1.7E-09 69.9 2.4 40 4-43 7-46 (336)
26 2p1m_B Transport inhibitor res 97.2 6.1E-05 2.1E-09 74.9 1.1 39 1-39 1-40 (594)
27 3ogk_B Coronatine-insensitive 96.2 0.001 3.6E-08 65.9 1.2 34 7-40 14-48 (592)
28 4gga_A P55CDC, cell division c 96.1 0.91 3.1E-05 42.2 21.0 200 89-344 114-316 (420)
29 3jrp_A Fusion protein of prote 95.3 0.94 3.2E-05 40.8 17.2 141 179-339 79-241 (379)
30 2z2n_A Virginiamycin B lyase; 94.8 1.8 6.1E-05 37.5 20.5 190 89-342 107-299 (299)
31 4aez_A CDC20, WD repeat-contai 94.2 3.3 0.00011 38.0 21.6 190 91-343 104-298 (401)
32 3ei3_B DNA damage-binding prot 93.8 3.7 0.00013 37.1 22.0 188 100-341 94-285 (383)
33 3jro_A Fusion protein of prote 93.8 1.9 6.6E-05 43.7 16.7 139 178-339 76-239 (753)
34 1k8k_C P40, ARP2/3 complex 41 92.9 5 0.00017 35.8 18.5 204 89-342 17-237 (372)
35 4e54_B DNA damage-binding prot 92.7 1.2 4E-05 41.8 12.3 195 91-341 131-330 (435)
36 3dwl_C Actin-related protein 2 90.6 2.5 8.6E-05 38.1 11.9 203 91-341 22-239 (377)
37 1l0q_A Surface layer protein; 90.1 10 0.00035 34.1 19.7 191 92-344 86-281 (391)
38 3g4e_A Regucalcin; six bladed 89.4 10 0.00035 33.1 20.4 203 89-347 22-239 (297)
39 3q7m_A Lipoprotein YFGL, BAMB; 88.6 13 0.00046 33.4 15.3 114 204-344 46-168 (376)
40 3v9f_A Two-component system se 88.3 23 0.0008 35.7 21.7 142 179-345 469-618 (781)
41 3dsm_A Uncharacterized protein 87.8 14 0.00049 32.8 23.7 143 178-343 63-217 (328)
42 1yfq_A Cell cycle arrest prote 87.3 14 0.00049 32.2 20.9 108 225-343 169-287 (342)
43 3hfq_A Uncharacterized protein 87.3 15 0.00052 32.4 16.7 146 179-344 63-226 (347)
44 3bws_A Protein LP49; two-domai 86.9 18 0.00062 33.0 19.4 197 89-344 178-396 (433)
45 3q7m_A Lipoprotein YFGL, BAMB; 86.8 17 0.00059 32.7 15.8 142 179-344 63-213 (376)
46 4ggc_A P55CDC, cell division c 86.7 15 0.0005 31.7 21.2 27 89-117 34-60 (318)
47 1got_B GT-beta; complex (GTP-b 86.6 17 0.00057 32.3 21.0 97 225-342 163-261 (340)
48 1l0q_A Surface layer protein; 86.1 19 0.00063 32.3 21.3 192 89-342 40-237 (391)
49 3u4y_A Uncharacterized protein 85.8 17 0.00059 31.6 22.0 195 89-341 7-210 (331)
50 4gqb_B Methylosome protein 50; 85.6 20 0.00067 32.2 17.1 101 225-344 191-295 (344)
51 1ri6_A Putative isomerase YBHE 84.9 19 0.00064 31.3 18.3 109 225-345 150-271 (343)
52 2dg1_A DRP35, lactonase; beta 84.2 21 0.00071 31.3 19.6 210 90-347 54-272 (333)
53 2hqs_A Protein TOLB; TOLB, PAL 84.0 26 0.00089 32.2 21.6 146 178-344 202-350 (415)
54 2ojh_A Uncharacterized protein 83.7 19 0.00063 30.3 16.2 204 89-345 50-265 (297)
55 2pm9_A Protein WEB1, protein t 83.7 25 0.00084 31.7 14.9 95 227-340 241-339 (416)
56 3jrp_A Fusion protein of prote 83.2 24 0.00081 31.1 17.4 116 211-344 171-294 (379)
57 3mbr_X Glutamine cyclotransfer 82.8 22 0.00076 30.5 14.5 112 209-346 28-142 (243)
58 1q7f_A NHL, brain tumor CG1071 82.2 23 0.00078 30.2 21.3 190 89-338 86-280 (286)
59 3i2n_A WD repeat-containing pr 82.0 25 0.00087 30.7 19.1 104 225-339 233-354 (357)
60 2qc5_A Streptogramin B lactona 81.9 23 0.00079 30.1 19.6 184 90-337 113-299 (300)
61 3hrp_A Uncharacterized protein 81.7 31 0.0011 31.8 14.3 111 211-344 141-255 (409)
62 3fm0_A Protein CIAO1; WDR39,SG 80.7 30 0.001 30.6 17.0 95 225-336 126-223 (345)
63 2bkl_A Prolyl endopeptidase; m 78.4 55 0.0019 32.4 20.9 149 180-346 253-405 (695)
64 4a11_B DNA excision repair pro 78.3 36 0.0012 30.2 17.0 104 225-341 165-279 (408)
65 3nol_A Glutamine cyclotransfer 78.2 33 0.0011 29.7 12.4 113 209-346 50-164 (262)
66 1rwi_B Serine/threonine-protei 78.1 22 0.00074 29.9 11.2 137 179-343 46-185 (270)
67 3scy_A Hypothetical bacterial 77.5 38 0.0013 30.0 21.5 117 211-344 221-345 (361)
68 1gxr_A ESG1, transducin-like e 77.3 34 0.0012 29.4 21.2 139 178-344 118-261 (337)
69 4aow_A Guanine nucleotide-bind 77.1 36 0.0012 29.5 17.4 101 225-340 236-339 (340)
70 3hfq_A Uncharacterized protein 76.8 38 0.0013 29.7 21.3 149 178-345 161-326 (347)
71 3ow8_A WD repeat-containing pr 76.4 39 0.0013 29.6 19.5 98 225-343 185-284 (321)
72 2ojh_A Uncharacterized protein 76.1 33 0.0011 28.6 20.7 190 100-344 20-212 (297)
73 3bg1_A Protein SEC13 homolog; 76.0 39 0.0013 29.4 15.7 56 271-338 188-247 (316)
74 1rwi_B Serine/threonine-protei 75.4 35 0.0012 28.5 19.1 189 90-341 76-267 (270)
75 2z2n_A Virginiamycin B lyase; 74.8 38 0.0013 28.6 22.2 112 211-347 151-263 (299)
76 1q7f_A NHL, brain tumor CG1071 74.6 39 0.0013 28.7 23.1 206 89-347 38-247 (286)
77 1ri6_A Putative isomerase YBHE 74.5 42 0.0014 29.0 18.6 140 179-338 60-209 (343)
78 1r5m_A SIR4-interacting protei 74.4 47 0.0016 29.6 17.8 101 225-337 309-424 (425)
79 1nir_A Nitrite reductase; hemo 74.0 64 0.0022 31.0 17.6 154 178-344 345-520 (543)
80 2aq5_A Coronin-1A; WD40 repeat 74.0 50 0.0017 29.7 18.0 198 94-346 146-350 (402)
81 3dwl_C Actin-related protein 2 73.5 6.5 0.00022 35.3 6.7 140 178-339 32-178 (377)
82 2qc5_A Streptogramin B lactona 72.3 44 0.0015 28.2 21.7 197 86-345 25-224 (300)
83 2aq5_A Coronin-1A; WD40 repeat 72.1 56 0.0019 29.4 22.9 207 91-345 93-308 (402)
84 3iz6_a 40S ribosomal protein R 71.9 56 0.0019 29.3 17.5 102 225-344 179-286 (380)
85 2dg1_A DRP35, lactonase; beta 71.8 50 0.0017 28.7 13.7 119 211-344 55-177 (333)
86 3no2_A Uncharacterized protein 71.5 49 0.0017 28.5 16.6 145 178-345 14-162 (276)
87 1k8k_C P40, ARP2/3 complex 41 71.4 52 0.0018 28.8 14.4 139 178-337 29-172 (372)
88 4h5i_A Guanine nucleotide-exch 71.2 57 0.002 29.2 19.2 112 210-339 229-344 (365)
89 3mkq_A Coatomer beta'-subunit; 70.7 88 0.003 31.1 21.4 99 225-343 162-264 (814)
90 2pm7_B Protein transport prote 70.4 51 0.0017 28.3 19.4 58 271-339 179-239 (297)
91 4a11_B DNA excision repair pro 70.0 59 0.002 28.8 19.3 98 225-342 266-369 (408)
92 1kb0_A Quinohemoprotein alcoho 69.7 41 0.0014 33.5 12.1 123 204-345 70-206 (677)
93 1r5m_A SIR4-interacting protei 68.5 64 0.0022 28.7 21.2 98 225-344 226-325 (425)
94 1kv9_A Type II quinohemoprotei 68.5 39 0.0013 33.6 11.6 122 204-344 59-193 (668)
95 4e54_B DNA damage-binding prot 68.3 72 0.0025 29.2 18.7 29 311-343 407-435 (435)
96 2hqs_A Protein TOLB; TOLB, PAL 68.2 72 0.0025 29.1 23.2 188 102-344 203-393 (415)
97 4a2l_A BT_4663, two-component 67.8 1.1E+02 0.0036 30.9 22.0 203 89-345 271-487 (795)
98 1yiq_A Quinohemoprotein alcoho 67.7 62 0.0021 32.3 12.9 123 204-344 63-198 (689)
99 1gxr_A ESG1, transducin-like e 67.3 59 0.002 27.8 23.8 136 179-344 163-302 (337)
100 3e5z_A Putative gluconolactona 67.2 59 0.002 27.7 24.0 196 94-347 42-255 (296)
101 4g56_B MGC81050 protein; prote 65.8 73 0.0025 28.3 16.2 100 225-343 203-306 (357)
102 3hxj_A Pyrrolo-quinoline quino 65.7 55 0.0019 28.2 11.1 29 211-244 147-175 (330)
103 3v9f_A Two-component system se 65.6 1.2E+02 0.0039 30.5 21.1 204 90-345 322-531 (781)
104 2z3z_A Dipeptidyl aminopeptida 64.7 1.1E+02 0.0037 29.9 22.9 194 102-341 235-438 (706)
105 3vgz_A Uncharacterized protein 64.5 70 0.0024 27.7 19.0 112 211-343 151-267 (353)
106 2iwa_A Glutamine cyclotransfer 64.3 71 0.0024 27.6 13.9 110 212-346 32-144 (266)
107 3k26_A Polycomb protein EED; W 63.3 75 0.0026 27.5 18.5 72 258-340 241-320 (366)
108 1pjx_A Dfpase, DIISOPROPYLFLUO 62.6 72 0.0025 27.2 20.4 197 100-345 44-264 (314)
109 2hz6_A Endoplasmic reticulum t 62.3 2.8 9.4E-05 38.5 1.6 30 206-240 4-35 (369)
110 3nok_A Glutaminyl cyclase; bet 61.6 81 0.0028 27.4 11.2 109 210-346 63-173 (268)
111 3bg1_A Protein SEC13 homolog; 61.4 81 0.0028 27.3 18.2 107 225-346 188-302 (316)
112 3zwl_B Eukaryotic translation 60.9 82 0.0028 27.2 23.5 70 257-344 186-255 (369)
113 3lrv_A PRE-mRNA-splicing facto 60.3 87 0.003 27.3 12.9 97 225-340 148-246 (343)
114 3vl1_A 26S proteasome regulato 59.7 97 0.0033 27.7 17.9 99 225-338 312-419 (420)
115 3sjl_D Methylamine dehydrogena 59.4 1.1E+02 0.0037 28.1 12.8 121 211-349 237-375 (386)
116 2fp8_A Strictosidine synthase; 59.4 89 0.003 27.1 18.3 102 225-347 164-278 (322)
117 2pbi_B Guanine nucleotide-bind 59.2 95 0.0032 27.4 21.0 132 178-335 219-354 (354)
118 1flg_A Protein (quinoprotein e 59.0 1.3E+02 0.0046 29.1 14.0 124 204-344 61-199 (582)
119 3vgz_A Uncharacterized protein 58.7 90 0.0031 27.0 24.4 206 87-343 96-308 (353)
120 3bws_A Protein LP49; two-domai 58.7 1E+02 0.0035 27.7 13.3 111 211-343 133-248 (433)
121 3mmy_A MRNA export factor; mRN 58.4 91 0.0031 26.9 20.1 32 308-342 277-308 (368)
122 3fm0_A Protein CIAO1; WDR39,SG 58.2 96 0.0033 27.2 13.6 102 225-342 82-185 (345)
123 3lrv_A PRE-mRNA-splicing facto 58.0 96 0.0033 27.1 17.7 143 178-343 148-299 (343)
124 3jro_A Fusion protein of prote 57.3 1.6E+02 0.0054 29.4 14.1 98 225-339 30-133 (753)
125 3frx_A Guanine nucleotide-bind 57.1 69 0.0023 27.8 10.1 73 257-343 29-101 (319)
126 4gga_A P55CDC, cell division c 56.3 1.2E+02 0.0039 27.5 12.3 87 238-343 94-183 (420)
127 2ad6_A Methanol dehydrogenase 55.0 1.5E+02 0.0053 28.5 14.0 122 204-344 55-191 (571)
128 1pjx_A Dfpase, DIISOPROPYLFLUO 54.8 99 0.0034 26.3 13.6 113 211-343 28-166 (314)
129 1npe_A Nidogen, entactin; glyc 54.4 96 0.0033 26.0 20.7 193 88-342 44-242 (267)
130 3mkq_A Coatomer beta'-subunit; 54.1 1.7E+02 0.0059 28.9 19.2 98 225-342 118-221 (814)
131 2ovr_B FBW7, F-BOX/WD repeat p 53.9 1.3E+02 0.0044 27.3 21.8 117 208-339 325-443 (445)
132 3dsm_A Uncharacterized protein 53.9 1.1E+02 0.0039 26.7 23.1 196 91-342 53-257 (328)
133 4gqb_B Methylosome protein 50; 53.3 1.2E+02 0.0041 26.8 11.5 63 271-344 102-164 (344)
134 4aez_A CDC20, WD repeat-contai 53.0 1.3E+02 0.0043 27.0 23.4 101 225-343 283-385 (401)
135 4a2l_A BT_4663, two-component 52.9 1.9E+02 0.0065 29.0 24.3 206 87-345 221-443 (795)
136 3azo_A Aminopeptidase; POP fam 52.5 1.7E+02 0.0058 28.3 19.7 219 91-344 90-331 (662)
137 3hrp_A Uncharacterized protein 52.4 1.4E+02 0.0048 27.3 21.2 201 89-346 139-362 (409)
138 3no2_A Uncharacterized protein 51.5 1.1E+02 0.0039 26.0 17.9 138 179-343 56-200 (276)
139 3mmy_A MRNA export factor; mRN 51.4 1.2E+02 0.004 26.2 12.3 71 258-345 54-124 (368)
140 2ghs_A AGR_C_1268P; regucalcin 51.4 1.2E+02 0.0042 26.4 13.7 46 212-264 61-107 (326)
141 3ow8_A WD repeat-containing pr 50.6 1.2E+02 0.0043 26.2 20.4 98 225-343 143-242 (321)
142 4g56_B MGC81050 protein; prote 50.0 1.4E+02 0.0046 26.4 18.5 93 225-339 248-344 (357)
143 4h5i_A Guanine nucleotide-exch 49.2 1.4E+02 0.0049 26.4 15.2 108 225-343 196-305 (365)
144 3k26_A Polycomb protein EED; W 48.9 1.3E+02 0.0044 25.9 21.3 68 258-338 299-366 (366)
145 1nir_A Nitrite reductase; hemo 48.2 1.9E+02 0.0065 27.6 19.3 121 211-342 334-462 (543)
146 3nok_A Glutaminyl cyclase; bet 48.0 1.4E+02 0.0047 25.9 16.5 137 181-344 77-216 (268)
147 4ery_A WD repeat-containing pr 47.8 1.3E+02 0.0044 25.6 21.6 99 225-343 128-228 (312)
148 3g4e_A Regucalcin; six bladed 46.9 1.4E+02 0.0046 25.6 15.2 47 211-264 24-71 (297)
149 3e5z_A Putative gluconolactona 46.3 1.3E+02 0.0046 25.3 13.0 114 211-344 38-167 (296)
150 3dm0_A Maltose-binding peripla 46.3 2.2E+02 0.0075 27.8 18.9 96 225-343 540-637 (694)
151 3tc9_A Hypothetical hydrolase; 46.3 1.8E+02 0.0062 26.8 14.3 116 205-342 139-261 (430)
152 2hes_X YDR267CP; beta-propelle 45.6 1.1E+02 0.0038 26.6 9.5 71 257-342 118-188 (330)
153 2ynn_A Coatomer subunit beta'; 45.6 1.4E+02 0.0049 25.4 15.1 95 225-340 34-130 (304)
154 3u4y_A Uncharacterized protein 45.5 1.4E+02 0.0049 25.4 14.4 108 212-344 10-123 (331)
155 2xzm_R RACK1; ribosome, transl 45.0 1.5E+02 0.0053 25.7 11.4 73 257-342 38-111 (343)
156 3dr2_A Exported gluconolactona 44.8 1.5E+02 0.0051 25.4 11.6 114 211-344 55-184 (305)
157 3fvz_A Peptidyl-glycine alpha- 44.1 1.6E+02 0.0055 25.5 12.9 106 226-345 69-182 (329)
158 1erj_A Transcriptional repress 43.5 1.8E+02 0.0061 26.0 23.0 198 89-342 132-345 (393)
159 3f3f_A Nucleoporin SEH1; struc 43.4 1.5E+02 0.0051 25.0 15.2 115 211-340 22-145 (351)
160 4ggc_A P55CDC, cell division c 43.4 1.5E+02 0.005 25.0 12.4 96 225-338 220-315 (318)
161 3v65_B Low-density lipoprotein 43.3 1.9E+02 0.0064 26.1 19.8 142 91-282 87-233 (386)
162 3nol_A Glutamine cyclotransfer 43.3 1.6E+02 0.0055 25.4 16.4 142 178-344 64-207 (262)
163 3odt_A Protein DOA1; ubiquitin 42.8 1.5E+02 0.0051 24.8 20.4 95 225-342 204-300 (313)
164 1got_B GT-beta; complex (GTP-b 41.8 1.7E+02 0.0059 25.3 15.1 100 225-342 76-177 (340)
165 3vl1_A 26S proteasome regulato 40.8 1.9E+02 0.0066 25.6 22.7 197 89-345 106-331 (420)
166 1sq9_A Antiviral protein SKI8; 39.5 1.9E+02 0.0067 25.2 16.3 105 225-342 90-220 (397)
167 2fp8_A Strictosidine synthase; 39.5 1.9E+02 0.0063 25.0 13.1 117 211-344 29-180 (322)
168 3mbr_X Glutamine cyclotransfer 39.4 1.8E+02 0.0061 24.7 19.1 142 178-344 42-185 (243)
169 3hxj_A Pyrrolo-quinoline quino 39.0 1.8E+02 0.0062 24.7 11.2 101 211-340 225-326 (330)
170 3dm0_A Maltose-binding peripla 37.4 2.1E+02 0.0071 28.0 10.9 61 271-342 404-465 (694)
171 2ynn_A Coatomer subunit beta'; 37.1 1.9E+02 0.0066 24.5 22.0 100 225-344 162-265 (304)
172 1yfq_A Cell cycle arrest prote 36.5 2E+02 0.0068 24.5 17.2 132 179-339 79-226 (342)
173 3scy_A Hypothetical bacterial 35.8 2.2E+02 0.0075 24.7 16.3 118 211-345 165-300 (361)
174 3sfz_A APAF-1, apoptotic pepti 34.9 4.2E+02 0.014 27.8 20.8 104 210-337 808-912 (1249)
175 3ott_A Two-component system se 34.9 3.5E+02 0.012 26.8 22.9 191 85-344 67-266 (758)
176 1evh_A WH1 domain, protein (ME 34.5 82 0.0028 23.2 5.6 43 101-159 10-52 (112)
177 2ghs_A AGR_C_1268P; regucalcin 34.1 2.3E+02 0.0079 24.5 21.8 205 88-347 57-269 (326)
178 1yr2_A Prolyl oligopeptidase; 34.0 3.5E+02 0.012 26.6 22.5 148 178-344 293-447 (741)
179 1vyh_C Platelet-activating fac 33.6 2.6E+02 0.009 25.0 20.6 65 258-341 308-372 (410)
180 2hes_X YDR267CP; beta-propelle 33.5 2.3E+02 0.0079 24.4 18.7 108 225-344 174-286 (330)
181 1egx_A VAsp, vasodilator-stimu 33.4 72 0.0025 23.7 5.1 44 102-160 11-54 (115)
182 2w18_A PALB2, fancn, partner a 32.7 2.8E+02 0.0096 25.1 16.4 93 225-336 259-355 (356)
183 2p4o_A Hypothetical protein; p 32.0 2.4E+02 0.0082 24.1 15.1 114 211-348 42-157 (306)
184 1vyh_C Platelet-activating fac 31.6 2.8E+02 0.0097 24.8 22.7 51 225-281 213-265 (410)
185 3sfz_A APAF-1, apoptotic pepti 31.2 4.8E+02 0.017 27.3 22.5 197 89-345 624-835 (1249)
186 1p22_A F-BOX/WD-repeat protein 31.1 2.9E+02 0.01 24.8 17.9 89 178-281 152-242 (435)
187 1sq9_A Antiviral protein SKI8; 31.0 2.7E+02 0.0091 24.3 21.5 58 271-343 206-272 (397)
188 3odt_A Protein DOA1; ubiquitin 30.9 2.3E+02 0.0079 23.5 21.3 109 208-343 110-219 (313)
189 3dr2_A Exported gluconolactona 30.3 2.5E+02 0.0087 23.8 21.1 107 225-348 168-277 (305)
190 3vu4_A KMHSV2; beta-propeller 29.7 2.8E+02 0.0097 24.2 12.0 65 257-340 206-273 (355)
191 2mad_H Methylamine dehydrogena 29.6 3.1E+02 0.01 24.5 13.9 116 211-344 224-356 (373)
192 2xyi_A Probable histone-bindin 29.1 3.2E+02 0.011 24.6 17.2 103 225-342 299-414 (430)
193 1w6s_A Methanol dehydrogenase 28.3 4.2E+02 0.014 25.7 13.3 123 205-345 56-198 (599)
194 2xyi_A Probable histone-bindin 28.3 3.3E+02 0.011 24.5 15.2 94 225-338 253-353 (430)
195 3v7d_B Cell division control p 28.1 3.3E+02 0.011 24.5 24.9 27 89-116 171-197 (464)
196 2pm9_A Protein WEB1, protein t 27.4 3.1E+02 0.011 24.0 17.5 103 225-342 187-298 (416)
197 4hw6_A Hypothetical protein, I 27.0 3.7E+02 0.013 24.7 13.7 116 204-341 140-262 (433)
198 3v64_C Agrin; beta propeller, 26.8 3.3E+02 0.011 24.0 21.5 141 91-281 44-189 (349)
199 3m0c_C LDL receptor, low-densi 26.2 5.2E+02 0.018 26.1 15.2 145 87-276 478-627 (791)
200 2kwv_A RAD30 homolog B, DNA po 26.0 31 0.0011 21.0 1.5 18 6-23 21-38 (48)
201 1jmx_B Amine dehydrogenase; ox 26.0 3E+02 0.01 23.3 13.3 108 211-340 10-136 (349)
202 3ott_A Two-component system se 25.8 4.9E+02 0.017 25.7 13.3 106 211-344 73-180 (758)
203 3v65_B Low-density lipoprotein 25.7 3.6E+02 0.012 24.1 20.3 111 211-345 213-326 (386)
204 2pm7_B Protein transport prote 25.7 3E+02 0.01 23.1 19.1 106 225-344 179-292 (297)
205 1ddw_A GLGF-domain protein hom 25.2 1.8E+02 0.0061 21.7 6.1 41 101-159 10-51 (120)
206 2qe8_A Uncharacterized protein 25.1 2.8E+02 0.0095 24.2 8.6 61 205-265 69-139 (343)
207 4aow_A Guanine nucleotide-bind 24.7 3.1E+02 0.011 23.0 19.8 96 225-342 194-290 (340)
208 3ei3_B DNA damage-binding prot 24.5 3.5E+02 0.012 23.5 20.3 135 178-338 95-236 (383)
209 3dw8_B Serine/threonine-protei 23.9 3.8E+02 0.013 23.7 20.0 103 225-338 197-315 (447)
210 3i2n_A WD repeat-containing pr 23.9 3.3E+02 0.011 23.0 21.7 110 210-339 178-292 (357)
211 2xzh_A Clathrin heavy chain 1; 23.8 1E+02 0.0035 27.9 5.1 35 306-344 259-296 (365)
212 2pbi_B Guanine nucleotide-bind 23.7 3.6E+02 0.012 23.4 15.0 104 225-343 85-190 (354)
213 2ecf_A Dipeptidyl peptidase IV 23.7 5.1E+02 0.017 25.1 18.0 210 89-344 217-465 (741)
214 2dk7_A Transcription elongatio 22.9 68 0.0023 21.7 2.9 16 327-342 28-43 (73)
215 1flg_A Protein (quinoprotein e 22.8 3.6E+02 0.012 25.9 9.5 80 179-266 466-548 (582)
216 2xdw_A Prolyl endopeptidase; a 22.1 5.5E+02 0.019 25.0 24.8 150 178-346 258-424 (710)
217 1pby_B Quinohemoprotein amine 21.4 3.6E+02 0.012 22.5 12.1 98 227-346 220-319 (337)
218 1n7d_A LDL receptor, low-densi 21.2 5.9E+02 0.02 25.1 10.9 58 204-265 541-602 (699)
219 3gre_A Serine/threonine-protei 20.6 3.1E+02 0.011 24.4 8.2 70 257-343 181-250 (437)
220 1w6s_A Methanol dehydrogenase 20.5 4E+02 0.014 25.9 9.2 80 179-266 453-535 (599)
221 3fvz_A Peptidyl-glycine alpha- 20.3 4.1E+02 0.014 22.8 22.0 118 205-338 198-322 (329)
No 1
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.08 E-value=4.3e-08 Score=90.00 Aligned_cols=202 Identities=10% Similarity=0.118 Sum_probs=128.7
Q ss_pred EEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcccceecCCCCCeEE
Q 046476 103 EILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSYAWMIDNHGTPECE 182 (376)
Q Consensus 103 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (376)
.++++||.|++|..+|+.+..+ ..++.... ++ +++.+....... +......++
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~r---------------~~~~~~~~---~~-~lyv~GG~~~~~--------~~~~~~~~~ 120 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSPR---------------CLFGLGEA---LN-SIYVVGGREIKD--------GERCLDSVM 120 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSCE---------------ESCEEEEE---TT-EEEEECCEESST--------TCCBCCCEE
T ss_pred ceEEecCCCCeEEECCCCCcch---------------hceeEEEE---CC-EEEEEeCCcCCC--------CCcccceEE
Confidence 4789999999999998876544 11111111 12 444443321100 023367899
Q ss_pred EEEcCCCCeeecCCCCCcceecCCceEECceEEEEEeCCC--CCCCEEEEEEcCCceeEEEe-CCCcccCcceeEecCCe
Q 046476 183 IFTLGTTSWRKIDAPPSRIHFRRQGLCANGFIHWIITNPR--KTKPVLAVFDVKEEKFDIVK-LPDEVRKHHDLIQAEEK 259 (376)
Q Consensus 183 vys~~t~~Wr~~~~~~~~~~~~~~~v~~~G~lywl~~~~~--~~~~~il~fDl~~e~~~~i~-~P~~~~~~~~L~~~~g~ 259 (376)
+|+..+++|+.++..+. .......+.++|.+|.++.... .....+..||+.+++|+.++ +|.. ......+..+|+
T Consensus 121 ~~d~~~~~W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~ 198 (315)
T 4asc_A 121 CYDRLSFKWGESDPLPY-VVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTA-RSLFGATVHDGR 198 (315)
T ss_dssp EEETTTTEEEECCCCSS-CCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSC-CBSCEEEEETTE
T ss_pred EECCCCCcEeECCCCCC-cccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCc-hhceEEEEECCE
Confidence 99999999999987642 2235667889999999987311 12467999999999999885 3433 445667788999
Q ss_pred EEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecc-c----------CCC
Q 046476 260 LGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYK-S----------SLV 328 (376)
Q Consensus 260 L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~-~----------~~~ 328 (376)
|+++.... .....-.+|+++-. ...|+++.. ++. +. ....+++. ++.|++.--. . ...
T Consensus 199 iyv~GG~~-~~~~~~~~~~yd~~----~~~W~~~~~-~p~-~r---~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~ 267 (315)
T 4asc_A 199 IIVAAGVT-DTGLTSSAEVYSIT----DNKWAPFEA-FPQ-ER---SSLSLVSL-VGTLYAIGGFATLETESGELVPTEL 267 (315)
T ss_dssp EEEEEEEC-SSSEEEEEEEEETT----TTEEEEECC-CSS-CC---BSCEEEEE-TTEEEEEEEEEEEECTTSCEEEEEE
T ss_pred EEEEeccC-CCCccceEEEEECC----CCeEEECCC-CCC-cc---cceeEEEE-CCEEEEECCccccCcCCcccccccc
Confidence 99998763 12234578888753 578998755 332 11 11223322 5565554310 0 012
Q ss_pred cEEEEEeCCCCcEEEE
Q 046476 329 SRVFIYDLKTQERRAI 344 (376)
Q Consensus 329 ~~v~~ydl~t~~~~~v 344 (376)
..+..||+++++|+.+
T Consensus 268 ~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 268 NDIWRYNEEEKKWEGV 283 (315)
T ss_dssp EEEEEEETTTTEEEEE
T ss_pred CcEEEecCCCChhhhh
Confidence 5689999999999998
No 2
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.08 E-value=2.9e-08 Score=91.23 Aligned_cols=201 Identities=12% Similarity=0.138 Sum_probs=127.1
Q ss_pred EEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcccceecCCCCCeEEE
Q 046476 104 ILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSYAWMIDNHGTPECEI 183 (376)
Q Consensus 104 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~~~~~~v 183 (376)
++++||.|++|..+|+.+..+. ...+.. ++ + +++.+...... .......+++
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~-------------~~~~~~-~~----~-~iyv~GG~~~~---------~~~~~~~~~~ 131 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARC-------------LFGLGE-VD----D-KIYVVAGKDLQ---------TEASLDSVLC 131 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBC-------------SCEEEE-ET----T-EEEEEEEEBTT---------TCCEEEEEEE
T ss_pred EEEEeCCCCcEEECCCCCcccc-------------ccceEE-EC----C-EEEEEcCccCC---------CCcccceEEE
Confidence 7899999999999988766541 111111 11 2 34444332110 0122467999
Q ss_pred EEcCCCCeeecCCCCCcceecCCceEECceEEEEEeCCC--CCCCEEEEEEcCCceeEEEeCCCcccCcceeEecCCeEE
Q 046476 184 FTLGTTSWRKIDAPPSRIHFRRQGLCANGFIHWIITNPR--KTKPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQAEEKLG 261 (376)
Q Consensus 184 ys~~t~~Wr~~~~~~~~~~~~~~~v~~~G~lywl~~~~~--~~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~~~g~L~ 261 (376)
|+..+++|+.++..+. .......+.++|.+|.++.... .....+..||+.+++|+.++..+........+..+|+|+
T Consensus 132 yd~~~~~W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy 210 (318)
T 2woz_A 132 YDPVAAKWSEVKNLPI-KVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIV 210 (318)
T ss_dssp EETTTTEEEEECCCSS-CEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEE
T ss_pred EeCCCCCEeECCCCCC-cccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEE
Confidence 9999999999876642 2335667789999999885211 114569999999999999853222234556778899999
Q ss_pred EEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEeccc-----------CCCcE
Q 046476 262 VLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKS-----------SLVSR 330 (376)
Q Consensus 262 ~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~-----------~~~~~ 330 (376)
++..... ....-.+|+++- +...|+++.. ++.... ...+++ .++.|++.--.. .....
T Consensus 211 v~GG~~~-~~~~~~~~~yd~----~~~~W~~~~~-~p~~r~----~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~ 279 (318)
T 2woz_A 211 IAGGVTE-DGLSASVEAFDL----KTNKWEVMTE-FPQERS----SISLVS-LAGSLYAIGGFAMIQLESKEFAPTEVND 279 (318)
T ss_dssp EEEEEET-TEEEEEEEEEET----TTCCEEECCC-CSSCCB----SCEEEE-ETTEEEEECCBCCBC----CCBCCBCCC
T ss_pred EEcCcCC-CCccceEEEEEC----CCCeEEECCC-CCCccc----ceEEEE-ECCEEEEECCeeccCCCCceeccceeee
Confidence 9986521 123457888875 3578998765 443111 122332 256666543100 12367
Q ss_pred EEEEeCCCCcEEEE
Q 046476 331 VFIYDLKTQERRAI 344 (376)
Q Consensus 331 v~~ydl~t~~~~~v 344 (376)
++.||+++++|+++
T Consensus 280 v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 280 IWKYEDDKKEWAGM 293 (318)
T ss_dssp EEEEETTTTEEEEE
T ss_pred EEEEeCCCCEehhh
Confidence 99999999999998
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.06 E-value=3.3e-08 Score=90.27 Aligned_cols=204 Identities=13% Similarity=0.051 Sum_probs=129.4
Q ss_pred cEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcccceecCCCCCeE
Q 046476 102 FEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSYAWMIDNHGTPEC 181 (376)
Q Consensus 102 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (376)
..+.++||.|++|..+|+.+..+. . ..... ++ + +++.+..... .......+
T Consensus 70 ~~~~~~d~~~~~W~~~~~~p~~r~-------~-----~~~~~--~~----~-~iyv~GG~~~----------~~~~~~~~ 120 (306)
T 3ii7_A 70 KRMDCYNVVKDSWYSKLGPPTPRD-------S-----LAACA--AE----G-KIYTSGGSEV----------GNSALYLF 120 (306)
T ss_dssp CEEEEEETTTTEEEEEECCSSCCB-------S-----CEEEE--ET----T-EEEEECCBBT----------TBSCCCCE
T ss_pred ceEEEEeCCCCeEEECCCCCcccc-------c-----eeEEE--EC----C-EEEEECCCCC----------CCcEeeeE
Confidence 578999999999999987665441 0 01111 12 1 3444443211 12336789
Q ss_pred EEEEcCCCCeeecCCCCCcceecCCceEECceEEEEEeCCC-CC----CCEEEEEEcCCceeEEEeCCCcccCcceeEec
Q 046476 182 EIFTLGTTSWRKIDAPPSRIHFRRQGLCANGFIHWIITNPR-KT----KPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQA 256 (376)
Q Consensus 182 ~vys~~t~~Wr~~~~~~~~~~~~~~~v~~~G~lywl~~~~~-~~----~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~~ 256 (376)
++|+..+++|+.++..+. .......+.++|.+|.++.... .. ...+..||+.+++|+.++..+.......++.+
T Consensus 121 ~~~d~~~~~W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 199 (306)
T 3ii7_A 121 ECYDTRTESWHTKPSMLT-QRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV 199 (306)
T ss_dssp EEEETTTTEEEEECCCSS-CCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred EEEeCCCCceEeCCCCcC-CcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE
Confidence 999999999999976642 2235667888999999985211 11 45699999999999999532222445667788
Q ss_pred CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecc--cCCCcEEEEE
Q 046476 257 EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYK--SSLVSRVFIY 334 (376)
Q Consensus 257 ~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~--~~~~~~v~~y 334 (376)
+|+|+++..... ....-.+|+++-. ...|+++.. ++. +. .....++. ++.|++.--. ......+..|
T Consensus 200 ~~~i~v~GG~~~-~~~~~~~~~yd~~----~~~W~~~~~-~p~-~r---~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~y 268 (306)
T 3ii7_A 200 KDKIFAVGGQNG-LGGLDNVEYYDIK----LNEWKMVSP-MPW-KG---VTVKCAAV-GSIVYVLAGFQGVGRLGHILEY 268 (306)
T ss_dssp TTEEEEECCEET-TEEBCCEEEEETT----TTEEEECCC-CSC-CB---SCCEEEEE-TTEEEEEECBCSSSBCCEEEEE
T ss_pred CCEEEEEeCCCC-CCCCceEEEeeCC----CCcEEECCC-CCC-Cc---cceeEEEE-CCEEEEEeCcCCCeeeeeEEEE
Confidence 999999876421 1223457777753 568998755 332 11 11223333 5666665410 1123689999
Q ss_pred eCCCCcEEEEEE
Q 046476 335 DLKTQERRAIKI 346 (376)
Q Consensus 335 dl~t~~~~~v~~ 346 (376)
|+++++|+.+.-
T Consensus 269 d~~~~~W~~~~~ 280 (306)
T 3ii7_A 269 NTETDKWVANSK 280 (306)
T ss_dssp ETTTTEEEEEEE
T ss_pred cCCCCeEEeCCC
Confidence 999999998853
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.05 E-value=5.3e-08 Score=88.60 Aligned_cols=202 Identities=10% Similarity=0.039 Sum_probs=127.9
Q ss_pred cEEEEEecCCcc---eecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcccceecCCCC
Q 046476 102 FEILMRNVVTQE---IIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSYAWMIDNHGT 178 (376)
Q Consensus 102 ~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~~ 178 (376)
..++++||.|++ |..+|+.+..+. ...+. .++ + +++.+..... ....
T Consensus 78 ~~~~~~d~~~~~~~~W~~~~~~p~~r~-------------~~~~~-~~~----~-~lyv~GG~~~-----------~~~~ 127 (301)
T 2vpj_A 78 SSVECLDYTADEDGVWYSVAPMNVRRG-------------LAGAT-TLG----D-MIYVSGGFDG-----------SRRH 127 (301)
T ss_dssp CCEEEEETTCCTTCCCEEECCCSSCCB-------------SCEEE-EET----T-EEEEECCBCS-----------SCBC
T ss_pred ceEEEEECCCCCCCeeEECCCCCCCcc-------------ceeEE-EEC----C-EEEEEcccCC-----------Cccc
Confidence 468999999999 999987765441 11111 112 2 4555443221 1225
Q ss_pred CeEEEEEcCCCCeeecCCCCCcceecCCceEECceEEEEEeCCCC-CCCEEEEEEcCCceeEEEeCCCcccCcceeEecC
Q 046476 179 PECEIFTLGTTSWRKIDAPPSRIHFRRQGLCANGFIHWIITNPRK-TKPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQAE 257 (376)
Q Consensus 179 ~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~-~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~~~ 257 (376)
..+++|+..+++|+.++..+ ........+.++|.+|.++..... ....+..||+.+++|+.++..+.......++..+
T Consensus 128 ~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~ 206 (301)
T 2vpj_A 128 TSMERYDPNIDQWSMLGDMQ-TAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLN 206 (301)
T ss_dssp CEEEEEETTTTEEEEEEECS-SCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEET
T ss_pred ceEEEEcCCCCeEEECCCCC-CCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEEC
Confidence 68999999999999987654 222256677889999999762111 2466999999999999985322223456677889
Q ss_pred CeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEeccc--CCCcEEEEEe
Q 046476 258 EKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKS--SLVSRVFIYD 335 (376)
Q Consensus 258 g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~--~~~~~v~~yd 335 (376)
|+|+++..... ....-+||+++- +...|+++.. ++.... ....++. ++.|++.--.. .....+..||
T Consensus 207 ~~i~v~GG~~~-~~~~~~v~~yd~----~~~~W~~~~~-~p~~r~----~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd 275 (301)
T 2vpj_A 207 DHIYVVGGFDG-TAHLSSVEAYNI----RTDSWTTVTS-MTTPRC----YVGATVL-RGRLYAIAGYDGNSLLSSIECYD 275 (301)
T ss_dssp TEEEEECCBCS-SSBCCCEEEEET----TTTEEEEECC-CSSCCB----SCEEEEE-TTEEEEECCBCSSSBEEEEEEEE
T ss_pred CEEEEEeCCCC-CcccceEEEEeC----CCCcEEECCC-CCCccc----ceeEEEE-CCEEEEEcCcCCCcccccEEEEc
Confidence 99999876521 122345777764 3578998755 432111 1223322 56666553110 0126799999
Q ss_pred CCCCcEEEEE
Q 046476 336 LKTQERRAIK 345 (376)
Q Consensus 336 l~t~~~~~v~ 345 (376)
+++++|+.+.
T Consensus 276 ~~~~~W~~~~ 285 (301)
T 2vpj_A 276 PIIDSWEVVT 285 (301)
T ss_dssp TTTTEEEEEE
T ss_pred CCCCeEEEcC
Confidence 9999999874
No 5
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.05 E-value=4.6e-08 Score=89.54 Aligned_cols=204 Identities=9% Similarity=0.044 Sum_probs=129.2
Q ss_pred cEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcccceecCCCCCeE
Q 046476 102 FEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSYAWMIDNHGTPEC 181 (376)
Q Consensus 102 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (376)
..+.++||.|++|..+|+.+..+. . ..... ++ + +++.+..... ......+
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~-------~-----~~~~~--~~----~-~iyv~GG~~~-----------~~~~~~~ 139 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRN-------R-----IGVGV--ID----G-HIYAVGGSHG-----------CIHHNSV 139 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCB-------T-----CEEEE--ET----T-EEEEECCEET-----------TEECCCE
T ss_pred ceEEEECCCCCeEeECCCCCcCcc-------c-----cEEEE--EC----C-EEEEEcCCCC-----------CcccccE
Confidence 468999999999999987765441 0 01111 12 1 3444432211 1124679
Q ss_pred EEEEcCCCCeeecCCCCCcceecCCceEECceEEEEEeCCCC-CCCEEEEEEcCCceeEEEeCCCcccCcceeEecCCeE
Q 046476 182 EIFTLGTTSWRKIDAPPSRIHFRRQGLCANGFIHWIITNPRK-TKPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQAEEKL 260 (376)
Q Consensus 182 ~vys~~t~~Wr~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~-~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~~~g~L 260 (376)
++|+..+++|+.++..+. .......+.++|.+|.++..... ....+..||+.+++|..++..+........+.++|+|
T Consensus 140 ~~yd~~~~~W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i 218 (308)
T 1zgk_A 140 ERYEPERDEWHLVAPMLT-RRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCI 218 (308)
T ss_dssp EEEETTTTEEEECCCCSS-CCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEE
T ss_pred EEECCCCCeEeECCCCCc-cccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEE
Confidence 999999999999976642 22256677889999999763211 1456999999999999885322223455677789999
Q ss_pred EEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecc--cCCCcEEEEEeCCC
Q 046476 261 GVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYK--SSLVSRVFIYDLKT 338 (376)
Q Consensus 261 ~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~--~~~~~~v~~ydl~t 338 (376)
+++.... .....-++|+++-. ...|+++.. ++. +. ....+++ .++.|++.--. ......+..||+++
T Consensus 219 yv~GG~~-~~~~~~~v~~yd~~----~~~W~~~~~-~p~-~r---~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 219 YAAGGYD-GQDQLNSVERYDVE----TETWTFVAP-MKH-RR---SALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp EEECCBC-SSSBCCCEEEEETT----TTEEEECCC-CSS-CC---BSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTT
T ss_pred EEEeCCC-CCCccceEEEEeCC----CCcEEECCC-CCC-Cc---cceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCC
Confidence 9988652 12234567887753 578998655 332 11 1122332 25666665310 11246799999999
Q ss_pred CcEEEEEEC
Q 046476 339 QERRAIKIP 347 (376)
Q Consensus 339 ~~~~~v~~~ 347 (376)
++|+.+.-.
T Consensus 288 ~~W~~~~~~ 296 (308)
T 1zgk_A 288 DTWSEVTRM 296 (308)
T ss_dssp TEEEEEEEC
T ss_pred CEEeecCCC
Confidence 999988543
No 6
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.03 E-value=3.7e-08 Score=89.78 Aligned_cols=202 Identities=9% Similarity=0.060 Sum_probs=126.9
Q ss_pred cEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcccceecCCCCCeE
Q 046476 102 FEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSYAWMIDNHGTPEC 181 (376)
Q Consensus 102 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (376)
..+.++||.|++|..+|+.+..+. ...+.. ++ + +++.+..... ......+
T Consensus 77 ~~~~~~d~~~~~W~~~~~~p~~r~-------------~~~~~~-~~----~-~iyv~GG~~~-----------~~~~~~~ 126 (302)
T 2xn4_A 77 RTVDSYDPVKDQWTSVANMRDRRS-------------TLGAAV-LN----G-LLYAVGGFDG-----------STGLSSV 126 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCB-------------SCEEEE-ET----T-EEEEEEEECS-----------SCEEEEE
T ss_pred cceEEECCCCCceeeCCCCCcccc-------------ceEEEE-EC----C-EEEEEcCCCC-----------CccCceE
Confidence 468899999999999997765441 111111 11 2 3444432211 1124679
Q ss_pred EEEEcCCCCeeecCCCCCcceecCCceEECceEEEEEeCCCC---CCCEEEEEEcCCceeEEEeCCCcccCcceeEecCC
Q 046476 182 EIFTLGTTSWRKIDAPPSRIHFRRQGLCANGFIHWIITNPRK---TKPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQAEE 258 (376)
Q Consensus 182 ~vys~~t~~Wr~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~---~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~~~g 258 (376)
++|+..+++|+.++..+. .......+.++|.+|.++..... ....+..||+.+++|+.++..+.......++..+|
T Consensus 127 ~~~d~~~~~W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 205 (302)
T 2xn4_A 127 EAYNIKSNEWFHVAPMNT-RRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNN 205 (302)
T ss_dssp EEEETTTTEEEEECCCSS-CCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred EEEeCCCCeEeecCCCCC-cccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECC
Confidence 999999999999976642 22256677889999999752111 13569999999999999853222234566778899
Q ss_pred eEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecc--cCCCcEEEEEeC
Q 046476 259 KLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYK--SSLVSRVFIYDL 336 (376)
Q Consensus 259 ~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~--~~~~~~v~~ydl 336 (376)
+|+++.... .....-++|+++-. ...|+++.. ++.... ...+++ .++.|++.--. ......+..||+
T Consensus 206 ~iyv~GG~~-~~~~~~~~~~yd~~----~~~W~~~~~-~~~~r~----~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 206 LLYAVGGHD-GPLVRKSVEVYDPT----TNAWRQVAD-MNMCRR----NAGVCA-VNGLLYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp EEEEECCBS-SSSBCCCEEEEETT----TTEEEEECC-CSSCCB----SCEEEE-ETTEEEEECCBCSSSBCCCEEEEET
T ss_pred EEEEECCCC-CCcccceEEEEeCC----CCCEeeCCC-CCCccc----cCeEEE-ECCEEEEECCcCCCcccccEEEEcC
Confidence 999997652 11223457887753 578998755 432111 122333 25666665311 011356999999
Q ss_pred CCCcEEEEE
Q 046476 337 KTQERRAIK 345 (376)
Q Consensus 337 ~t~~~~~v~ 345 (376)
++++|+.+.
T Consensus 275 ~~~~W~~~~ 283 (302)
T 2xn4_A 275 TTDKWTVVS 283 (302)
T ss_dssp TTTEEEECS
T ss_pred CCCeEEECC
Confidence 999999863
No 7
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.00 E-value=1.2e-10 Score=104.95 Aligned_cols=49 Identities=20% Similarity=0.355 Sum_probs=46.0
Q ss_pred CCCCCChHHHHHHHccCCccccc-ccccccccchhhhcCCchhHHHHHhccc
Q 046476 5 RRDTVPHDVAMDVLKILPEKARM-RFKCVSKTWYSSIKGTILPLIVSFTNSS 55 (376)
Q Consensus 5 ~~~~LP~dll~~IL~rLp~~sl~-r~r~VcK~W~~li~~~~~~F~~~~~~~~ 55 (376)
....||+|||.+||++||+++|+ ||++|||+|++||++| .|.+.++.+.
T Consensus 50 ~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~--~~w~~~~~~~ 99 (297)
T 2e31_A 50 YLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGA--PLWLLKCQQE 99 (297)
T ss_dssp CTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSH--HHHHHHHHHT
T ss_pred ChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcCh--HHHHHHhhcc
Confidence 35689999999999999999999 9999999999999999 9999998776
No 8
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.99 E-value=1.4e-10 Score=77.07 Aligned_cols=41 Identities=20% Similarity=0.422 Sum_probs=38.5
Q ss_pred CCCCChHHHHHHHccCCcccccccccccccchhhhcCCchhHH
Q 046476 6 RDTVPHDVAMDVLKILPEKARMRFKCVSKTWYSSIKGTILPLI 48 (376)
Q Consensus 6 ~~~LP~dll~~IL~rLp~~sl~r~r~VcK~W~~li~~~~~~F~ 48 (376)
...||+||+.+||++||+++++++++|||+|+.++.++ .|-
T Consensus 9 ~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~--~lW 49 (53)
T 1fs1_A 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDE--SLW 49 (53)
T ss_dssp CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCG--GGC
T ss_pred HHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCh--HHH
Confidence 57899999999999999999999999999999999998 663
No 9
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.93 E-value=1.2e-07 Score=87.03 Aligned_cols=155 Identities=12% Similarity=0.066 Sum_probs=103.2
Q ss_pred CeEEEEEcCCCCeeecCCCCCcceecCCceEECceEEEEEeCC----CCCCCEEEEEEcCCceeEEEe-CCCcccCccee
Q 046476 179 PECEIFTLGTTSWRKIDAPPSRIHFRRQGLCANGFIHWIITNP----RKTKPVLAVFDVKEEKFDIVK-LPDEVRKHHDL 253 (376)
Q Consensus 179 ~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~~G~lywl~~~~----~~~~~~il~fDl~~e~~~~i~-~P~~~~~~~~L 253 (376)
..+++|+..+++|+.++..+ ........+.++|.+|.++... ......+..||+.+.+|+.++ +|.. ......
T Consensus 67 ~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~ 144 (315)
T 4asc_A 67 AYFLQFDHLDSEWLGMPPLP-SPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYV-VYGHTV 144 (315)
T ss_dssp EEEEEEETTTTEEEECCCBS-SCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSC-CBSCEE
T ss_pred cceEEecCCCCeEEECCCCC-cchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCc-ccceeE
Confidence 45899999999999987664 2233566788899999998621 112466999999999999885 3433 455667
Q ss_pred EecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEeccc--CCCcEE
Q 046476 254 IQAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKS--SLVSRV 331 (376)
Q Consensus 254 ~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~--~~~~~v 331 (376)
+..+|+|+++..........-++|+++-. ...|+++.. ++. +. .....++. ++.|++.--.. .....+
T Consensus 145 ~~~~~~iyv~GG~~~~~~~~~~~~~yd~~----~~~W~~~~~-~p~-~r---~~~~~~~~-~~~iyv~GG~~~~~~~~~~ 214 (315)
T 4asc_A 145 LSHMDLVYVIGGKGSDRKCLNKMCVYDPK----KFEWKELAP-MQT-AR---SLFGATVH-DGRIIVAAGVTDTGLTSSA 214 (315)
T ss_dssp EEETTEEEEECCBCTTSCBCCCEEEEETT----TTEEEECCC-CSS-CC---BSCEEEEE-TTEEEEEEEECSSSEEEEE
T ss_pred EEECCEEEEEeCCCCCCcccceEEEEeCC----CCeEEECCC-CCC-ch---hceEEEEE-CCEEEEEeccCCCCccceE
Confidence 78899999998752223334567888753 578998655 432 21 11222322 56666543110 013479
Q ss_pred EEEeCCCCcEEEEE
Q 046476 332 FIYDLKTQERRAIK 345 (376)
Q Consensus 332 ~~ydl~t~~~~~v~ 345 (376)
..||+++++|+.+.
T Consensus 215 ~~yd~~~~~W~~~~ 228 (315)
T 4asc_A 215 EVYSITDNKWAPFE 228 (315)
T ss_dssp EEEETTTTEEEEEC
T ss_pred EEEECCCCeEEECC
Confidence 99999999999885
No 10
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.92 E-value=2e-07 Score=84.68 Aligned_cols=201 Identities=13% Similarity=0.053 Sum_probs=127.8
Q ss_pred cEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcccceecCCCCCeE
Q 046476 102 FEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSYAWMIDNHGTPEC 181 (376)
Q Consensus 102 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (376)
..++++||.|++|..+|+.+..+. . ..... .+ + +++.+..... ......+
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~------~------~~~~~--~~----~-~l~v~GG~~~-----------~~~~~~~ 80 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRR------Y------VASVS--LH----D-RIYVIGGYDG-----------RSRLSSV 80 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCB------S------CEEEE--ET----T-EEEEECCBCS-----------SCBCCCE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhc------c------ccEEE--EC----C-EEEEEcCCCC-----------CccCceE
Confidence 468899999999999997655431 0 01111 12 1 3444443221 1235789
Q ss_pred EEEEcCCCC---eeecCCCCCcceecCCceEECceEEEEEeCCCC-CCCEEEEEEcCCceeEEEe-CCCcccCcceeEec
Q 046476 182 EIFTLGTTS---WRKIDAPPSRIHFRRQGLCANGFIHWIITNPRK-TKPVLAVFDVKEEKFDIVK-LPDEVRKHHDLIQA 256 (376)
Q Consensus 182 ~vys~~t~~---Wr~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~-~~~~il~fDl~~e~~~~i~-~P~~~~~~~~L~~~ 256 (376)
++|+..++. |+.++..+. .......+.++|.+|.++..... ....+..||+.+.+|+.++ +|.. ......+..
T Consensus 81 ~~~d~~~~~~~~W~~~~~~p~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~ 158 (301)
T 2vpj_A 81 ECLDYTADEDGVWYSVAPMNV-RRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTA-REGAGLVVA 158 (301)
T ss_dssp EEEETTCCTTCCCEEECCCSS-CCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSC-CBSCEEEEE
T ss_pred EEEECCCCCCCeeEECCCCCC-CccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCC-cccceEEEE
Confidence 999999999 999976642 22256677889999999863211 1457999999999999985 4433 345567778
Q ss_pred CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEeccc--CCCcEEEEE
Q 046476 257 EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKS--SLVSRVFIY 334 (376)
Q Consensus 257 ~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~--~~~~~v~~y 334 (376)
+|+|+++.... .....-.+|+++-. ...|+++.. ++. +. .....++ .++.|++.--.. .....+..|
T Consensus 159 ~~~iyv~GG~~-~~~~~~~~~~~d~~----~~~W~~~~~-~p~-~r---~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~y 227 (301)
T 2vpj_A 159 SGVIYCLGGYD-GLNILNSVEKYDPH----TGHWTNVTP-MAT-KR---SGAGVAL-LNDHIYVVGGFDGTAHLSSVEAY 227 (301)
T ss_dssp TTEEEEECCBC-SSCBCCCEEEEETT----TTEEEEECC-CSS-CC---BSCEEEE-ETTEEEEECCBCSSSBCCCEEEE
T ss_pred CCEEEEECCCC-CCcccceEEEEeCC----CCcEEeCCC-CCc-cc---ccceEEE-ECCEEEEEeCCCCCcccceEEEE
Confidence 99999987652 11233457777753 578998755 332 21 1122332 256666653110 114579999
Q ss_pred eCCCCcEEEEE
Q 046476 335 DLKTQERRAIK 345 (376)
Q Consensus 335 dl~t~~~~~v~ 345 (376)
|+++++|+.+.
T Consensus 228 d~~~~~W~~~~ 238 (301)
T 2vpj_A 228 NIRTDSWTTVT 238 (301)
T ss_dssp ETTTTEEEEEC
T ss_pred eCCCCcEEECC
Confidence 99999999885
No 11
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.91 E-value=1.1e-07 Score=86.64 Aligned_cols=203 Identities=12% Similarity=0.030 Sum_probs=128.3
Q ss_pred CcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcccceecCCCCCe
Q 046476 101 GFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSYAWMIDNHGTPE 180 (376)
Q Consensus 101 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~~~~ 180 (376)
...+.++||.+++|..+++.+..+. ...+. ..+ + +++.+.... ......
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~-------------~~~~~-~~~----~-~lyv~GG~~------------~~~~~~ 71 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRR-------------DAACV-FWD----N-VVYILGGSQ------------LFPIKR 71 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCB-------------SCEEE-EET----T-EEEEECCBS------------SSBCCE
T ss_pred CceEEEecCCCCCEecCCCCCcccc-------------eeEEE-EEC----C-EEEEEeCCC------------CCCcce
Confidence 4568899999999999987765441 11111 112 2 344443321 122578
Q ss_pred EEEEEcCCCCeeecCCCCCcceecCCceEECceEEEEEeCC--CCCCCEEEEEEcCCceeEEEeCCCcccCcceeEecCC
Q 046476 181 CEIFTLGTTSWRKIDAPPSRIHFRRQGLCANGFIHWIITNP--RKTKPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQAEE 258 (376)
Q Consensus 181 ~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~~G~lywl~~~~--~~~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~~~g 258 (376)
+++|+..+++|+.++..+ ........+.++|.+|.++... ......+..||+.+.+|+.++..+........+.++|
T Consensus 72 ~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~ 150 (306)
T 3ii7_A 72 MDCYNVVKDSWYSKLGPP-TPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANG 150 (306)
T ss_dssp EEEEETTTTEEEEEECCS-SCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred EEEEeCCCCeEEECCCCC-ccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECC
Confidence 999999999999987664 2222566778899999998632 1124679999999999999853222244556778899
Q ss_pred eEEEEEecCCCCCC---eEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecc--cCCCcEEEE
Q 046476 259 KLGVLDCDDFRSKN---KIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYK--SSLVSRVFI 333 (376)
Q Consensus 259 ~L~~~~~~~~~~~~---~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~--~~~~~~v~~ 333 (376)
+|+++......... .-.+|+++-. ...|+++.. ++. +. ....+++. ++.|++.--. ......+..
T Consensus 151 ~iyv~GG~~~~~~~~~~~~~~~~yd~~----~~~W~~~~~-~p~-~r---~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~ 220 (306)
T 3ii7_A 151 LIYVCGGSLGNNVSGRVLNSCEVYDPA----TETWTELCP-MIE-AR---KNHGLVFV-KDKIFAVGGQNGLGGLDNVEY 220 (306)
T ss_dssp EEEEECCEESCTTTCEECCCEEEEETT----TTEEEEECC-CSS-CC---BSCEEEEE-TTEEEEECCEETTEEBCCEEE
T ss_pred EEEEECCCCCCCCcccccceEEEeCCC----CCeEEECCC-ccc-hh---hcceEEEE-CCEEEEEeCCCCCCCCceEEE
Confidence 99998865211111 4467777753 568998755 332 11 11223322 5666665310 001357999
Q ss_pred EeCCCCcEEEEE
Q 046476 334 YDLKTQERRAIK 345 (376)
Q Consensus 334 ydl~t~~~~~v~ 345 (376)
||+++++|+.+.
T Consensus 221 yd~~~~~W~~~~ 232 (306)
T 3ii7_A 221 YDIKLNEWKMVS 232 (306)
T ss_dssp EETTTTEEEECC
T ss_pred eeCCCCcEEECC
Confidence 999999999874
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.90 E-value=6.7e-08 Score=90.26 Aligned_cols=225 Identities=9% Similarity=-0.040 Sum_probs=128.2
Q ss_pred cceEEE-EEecCcEEEEEecC--CcceecCCCCC-cccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCC
Q 046476 91 NGFICF-YNIVGFEILMRNVV--TQEIIDLPKST-FVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNS 166 (376)
Q Consensus 91 nGLl~~-~~~~~~~~~V~NP~--T~~~~~LP~~~-~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~ 166 (376)
+|-|.+ .......++++||. +++|..+|+.+ ..+. . ..... ++ + +++.+........
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~-------~-----~~~~~--~~---~--~lyv~GG~~~~~~ 79 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRD-------Q-----ATSAF--ID---G--NLYVFGGIGKNSE 79 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCB-------S-----CEEEE--ET---T--EEEEECCEEECTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCc-------c-----ceEEE--EC---C--EEEEEcCCCCCCC
Confidence 555544 33345678999998 49999998866 3331 0 11222 12 1 3444432200000
Q ss_pred CcccceecCCCCCeEEEEEcCCCCeeecCCCCCcceecCCceEECceEEEEEeCCCC-----------------------
Q 046476 167 SSYAWMIDNHGTPECEIFTLGTTSWRKIDAPPSRIHFRRQGLCANGFIHWIITNPRK----------------------- 223 (376)
Q Consensus 167 ~~~~~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~----------------------- 223 (376)
........+++|+..+++|+.+...+|........+..+|.+|.++.....
T Consensus 80 ------~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (357)
T 2uvk_A 80 ------GLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKIN 153 (357)
T ss_dssp ------SCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred ------ccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhh
Confidence 001225789999999999999987653322244557799999999862100
Q ss_pred ------------CCCEEEEEEcCCceeEEEe-CCCcccCcceeEecCCeEEEEEecCCCCCCeEEEEEEcc-CCCCCCCc
Q 046476 224 ------------TKPVLAVFDVKEEKFDIVK-LPDEVRKHHDLIQAEEKLGVLDCDDFRSKNKIRVWILKD-YGRGGGEV 289 (376)
Q Consensus 224 ------------~~~~il~fDl~~e~~~~i~-~P~~~~~~~~L~~~~g~L~~~~~~~~~~~~~~~IW~l~~-~~~g~~~~ 289 (376)
....+..||+.+.+|+.+. +|........++..+|+|+++..........-++|.++- . +...
T Consensus 154 ~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~---~~~~ 230 (357)
T 2uvk_A 154 AHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTG---NNLK 230 (357)
T ss_dssp HHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC------CE
T ss_pred hhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecC---CCCc
Confidence 1268999999999999884 454323336778889999998754211122345777652 2 3568
Q ss_pred eeEEEEEeecccccccCcEeEEEccCCcEEEEecccC-------------------CCcEEEEEeCCCCcEEEEEEC
Q 046476 290 WIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSS-------------------LVSRVFIYDLKTQERRAIKIP 347 (376)
Q Consensus 290 W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~-------------------~~~~v~~ydl~t~~~~~v~~~ 347 (376)
|+++.. ++. +.. .....+++ .++.|++.--... .-..+..||+++++|+.+.-.
T Consensus 231 W~~~~~-~~~-~~~-~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~ 303 (357)
T 2uvk_A 231 WNKLAP-VSS-PDG-VAGGFAGI-SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGEL 303 (357)
T ss_dssp EEECCC-SST-TTC-CBSCEEEE-ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEEC
T ss_pred EEecCC-CCC-Ccc-cccceEEE-ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCC
Confidence 998755 432 210 11122332 3566665531000 013688999999999998643
No 13
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.88 E-value=2.2e-07 Score=84.58 Aligned_cols=203 Identities=9% Similarity=0.021 Sum_probs=127.0
Q ss_pred cEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcccceecCCCCCeE
Q 046476 102 FEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSYAWMIDNHGTPEC 181 (376)
Q Consensus 102 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (376)
..+.++||.+++|..+++.+..+. . ..... .+ + +++.+..... ......+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~------~------~~~~~--~~----~-~lyv~GG~~~-----------~~~~~~~ 79 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRC------R------AGMVY--MA----G-LVFAVGGFNG-----------SLRVRTV 79 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCB------S------CEEEE--ET----T-EEEEESCBCS-----------SSBCCCE
T ss_pred CcEEEEcCcCCcEeEcccCCcccc------c------ceEEE--EC----C-EEEEEeCcCC-----------Cccccce
Confidence 457899999999999987665431 0 01111 11 2 3444433221 1225679
Q ss_pred EEEEcCCCCeeecCCCCCcceecCCceEECceEEEEEeCCCC-CCCEEEEEEcCCceeEEEeCCCcccCcceeEecCCeE
Q 046476 182 EIFTLGTTSWRKIDAPPSRIHFRRQGLCANGFIHWIITNPRK-TKPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQAEEKL 260 (376)
Q Consensus 182 ~vys~~t~~Wr~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~-~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~~~g~L 260 (376)
++|+..+++|+.++..+. .......+.++|.+|.++..... ....+..||+.+.+|+.++..+........+.++|+|
T Consensus 80 ~~~d~~~~~W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i 158 (302)
T 2xn4_A 80 DSYDPVKDQWTSVANMRD-RRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLL 158 (302)
T ss_dssp EEEETTTTEEEEECCCSS-CCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEE
T ss_pred EEECCCCCceeeCCCCCc-cccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEE
Confidence 999999999999986642 22256677889999999863211 1246889999999999985433224455677789999
Q ss_pred EEEEecCCCC-CCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEeccc--CCCcEEEEEeCC
Q 046476 261 GVLDCDDFRS-KNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKS--SLVSRVFIYDLK 337 (376)
Q Consensus 261 ~~~~~~~~~~-~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~--~~~~~v~~ydl~ 337 (376)
+++....... ...-.+|+++-. ...|+++.. ++. +. ....+++. ++.|++.--.- .....+..||++
T Consensus 159 yv~GG~~~~~~~~~~~~~~yd~~----~~~W~~~~~-~p~-~r---~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~ 228 (302)
T 2xn4_A 159 YAVGGYDVASRQCLSTVECYNAT----TNEWTYIAE-MST-RR---SGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPT 228 (302)
T ss_dssp EEECCEETTTTEECCCEEEEETT----TTEEEEECC-CSS-CC---BSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETT
T ss_pred EEEeCCCCCCCccccEEEEEeCC----CCcEEECCC-Ccc-cc---ccccEEEE-CCEEEEECCCCCCcccceEEEEeCC
Confidence 9987652111 113357777753 578998755 442 21 11223332 56666653100 013579999999
Q ss_pred CCcEEEEE
Q 046476 338 TQERRAIK 345 (376)
Q Consensus 338 t~~~~~v~ 345 (376)
+++|+.+.
T Consensus 229 ~~~W~~~~ 236 (302)
T 2xn4_A 229 TNAWRQVA 236 (302)
T ss_dssp TTEEEEEC
T ss_pred CCCEeeCC
Confidence 99999875
No 14
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.82 E-value=1.4e-07 Score=86.24 Aligned_cols=205 Identities=10% Similarity=-0.000 Sum_probs=125.9
Q ss_pred cEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcccceecCCCCCeE
Q 046476 102 FEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSYAWMIDNHGTPEC 181 (376)
Q Consensus 102 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (376)
..+.++||.|++|..+++.+..+. ...+. ..+ + +++.+....... ........+
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~-------------~~~~~-~~~----~-~lyv~GG~~~~~-------~~~~~~~~~ 92 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRS-------------GLAGC-VVG----G-LLYAVGGRNNSP-------DGNTDSSAL 92 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCB-------------SCEEE-EET----T-EEEEECCEEEET-------TEEEECCCE
T ss_pred ceEEEEcCCCCeEeECCCCCcccc-------------cceEE-EEC----C-EEEEECCCcCCC-------CCCeecceE
Confidence 468999999999999987665441 11111 111 1 333333221000 001124678
Q ss_pred EEEEcCCCCeeecCCCCCcceecCCceEECceEEEEEeCCCC-CCCEEEEEEcCCceeEEEe-CCCcccCcceeEecCCe
Q 046476 182 EIFTLGTTSWRKIDAPPSRIHFRRQGLCANGFIHWIITNPRK-TKPVLAVFDVKEEKFDIVK-LPDEVRKHHDLIQAEEK 259 (376)
Q Consensus 182 ~vys~~t~~Wr~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~-~~~~il~fDl~~e~~~~i~-~P~~~~~~~~L~~~~g~ 259 (376)
++|+..+++|+.++..+. .......+.++|.+|.++..... ....+..||+.+.+|+.++ +|.. ......+.++|+
T Consensus 93 ~~~d~~~~~W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~ 170 (308)
T 1zgk_A 93 DCYNPMTNQWSPCAPMSV-PRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTR-RIGVGVAVLNRL 170 (308)
T ss_dssp EEEETTTTEEEECCCCSS-CCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSC-CBSCEEEEETTE
T ss_pred EEECCCCCeEeECCCCCc-CccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcc-ccceEEEEECCE
Confidence 999999999999976642 22256677889999998752111 1356899999999999885 3433 345566777999
Q ss_pred EEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecc--cCCCcEEEEEeCC
Q 046476 260 LGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYK--SSLVSRVFIYDLK 337 (376)
Q Consensus 260 L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~--~~~~~~v~~ydl~ 337 (376)
|+++..... ....-.+|+++- ....|+++.. ++. +. .....++. ++.|++.--. ......+..||++
T Consensus 171 iyv~GG~~~-~~~~~~~~~yd~----~~~~W~~~~~-~p~-~r---~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~ 239 (308)
T 1zgk_A 171 LYAVGGFDG-TNRLNSAECYYP----ERNEWRMITA-MNT-IR---SGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVE 239 (308)
T ss_dssp EEEECCBCS-SCBCCCEEEEET----TTTEEEECCC-CSS-CC---BSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETT
T ss_pred EEEEeCCCC-CCcCceEEEEeC----CCCeEeeCCC-CCC-cc---ccceEEEE-CCEEEEEeCCCCCCccceEEEEeCC
Confidence 999976521 122345777774 3578998655 332 21 11223322 5666655310 0113679999999
Q ss_pred CCcEEEEE
Q 046476 338 TQERRAIK 345 (376)
Q Consensus 338 t~~~~~v~ 345 (376)
+++|+.+.
T Consensus 240 ~~~W~~~~ 247 (308)
T 1zgk_A 240 TETWTFVA 247 (308)
T ss_dssp TTEEEECC
T ss_pred CCcEEECC
Confidence 99999874
No 15
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.77 E-value=3.9e-07 Score=83.63 Aligned_cols=155 Identities=17% Similarity=0.153 Sum_probs=101.0
Q ss_pred CeEEEEEcCCCCeeecCCCCCcceecCCceEECceEEEEEeCCC-C--CCCEEEEEEcCCceeEEEe-CCCcccCcceeE
Q 046476 179 PECEIFTLGTTSWRKIDAPPSRIHFRRQGLCANGFIHWIITNPR-K--TKPVLAVFDVKEEKFDIVK-LPDEVRKHHDLI 254 (376)
Q Consensus 179 ~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~~G~lywl~~~~~-~--~~~~il~fDl~~e~~~~i~-~P~~~~~~~~L~ 254 (376)
..+++|+..+++|+.++..+. .......+.++|.+|.++.... + ....+..||+.+.+|+.++ +|.. ......+
T Consensus 78 ~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~ 155 (318)
T 2woz_A 78 SYFFQLDNVSSEWVGLPPLPS-ARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIK-VYGHNVI 155 (318)
T ss_dssp BEEEEEETTTTEEEECSCBSS-CBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSC-EESCEEE
T ss_pred ccEEEEeCCCCcEEECCCCCc-cccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCc-ccccEEE
Confidence 358999999999999876542 2225667788999999987321 1 1356899999999999985 4443 3445567
Q ss_pred ecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEeccc--CCCcEEE
Q 046476 255 QAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKS--SLVSRVF 332 (376)
Q Consensus 255 ~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~--~~~~~v~ 332 (376)
..+|+|+++..........-++|+++-. ...|++... ++. +. .....++ .++.|++.--.. .....+.
T Consensus 156 ~~~~~iyv~GG~~~~~~~~~~~~~yd~~----~~~W~~~~~-~p~-~r---~~~~~~~-~~~~iyv~GG~~~~~~~~~~~ 225 (318)
T 2woz_A 156 SHNGMIYCLGGKTDDKKCTNRVFIYNPK----KGDWKDLAP-MKT-PR---SMFGVAI-HKGKIVIAGGVTEDGLSASVE 225 (318)
T ss_dssp EETTEEEEECCEESSSCBCCCEEEEETT----TTEEEEECC-CSS-CC---BSCEEEE-ETTEEEEEEEEETTEEEEEEE
T ss_pred EECCEEEEEcCCCCCCCccceEEEEcCC----CCEEEECCC-CCC-Cc---ccceEEE-ECCEEEEEcCcCCCCccceEE
Confidence 7899999987642122233457888753 578998755 332 11 1122333 256666543100 0125789
Q ss_pred EEeCCCCcEEEEE
Q 046476 333 IYDLKTQERRAIK 345 (376)
Q Consensus 333 ~ydl~t~~~~~v~ 345 (376)
.||+++++|+.+.
T Consensus 226 ~yd~~~~~W~~~~ 238 (318)
T 2woz_A 226 AFDLKTNKWEVMT 238 (318)
T ss_dssp EEETTTCCEEECC
T ss_pred EEECCCCeEEECC
Confidence 9999999999874
No 16
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.71 E-value=8.6e-06 Score=77.90 Aligned_cols=47 Identities=17% Similarity=0.220 Sum_probs=42.6
Q ss_pred CCCCChHHHHHHHccCCcccccccccccccchhhhcCCchhHHHHHhcc
Q 046476 6 RDTVPHDVAMDVLKILPEKARMRFKCVSKTWYSSIKGTILPLIVSFTNS 54 (376)
Q Consensus 6 ~~~LP~dll~~IL~rLp~~sl~r~r~VcK~W~~li~~~~~~F~~~~~~~ 54 (376)
...||+|++..||+.|++++|+++.+|||+|+.++.++ .+-+....+
T Consensus 19 ~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~--~~w~~~~~~ 65 (445)
T 2ovr_B 19 ISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDN--LLWREKCKE 65 (445)
T ss_dssp TTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCS--HHHHHHHTT
T ss_pred hHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCch--hHhhhheee
Confidence 46799999999999999999999999999999999999 887766543
No 17
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.61 E-value=1.9e-05 Score=75.70 Aligned_cols=43 Identities=19% Similarity=0.391 Sum_probs=37.9
Q ss_pred CCCChHHHHHHHccCCcccccccccccccchhhhcC-CchhHHHHH
Q 046476 7 DTVPHDVAMDVLKILPEKARMRFKCVSKTWYSSIKG-TILPLIVSF 51 (376)
Q Consensus 7 ~~LP~dll~~IL~rLp~~sl~r~r~VcK~W~~li~~-~~~~F~~~~ 51 (376)
..||+||+.+||+.||+++|+++..|||+|+.++.+ + ..-+.+
T Consensus 16 ~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~--~~w~~~ 59 (464)
T 3v7d_B 16 TSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKST--SLWKKL 59 (464)
T ss_dssp HHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCH--HHHHHH
T ss_pred HHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCH--HHHHHH
Confidence 469999999999999999999999999999999998 5 444443
No 18
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.59 E-value=1e-05 Score=77.18 Aligned_cols=45 Identities=22% Similarity=0.363 Sum_probs=39.9
Q ss_pred CCCChH----HHHHHHccCCcccccccccccccchhhhcCCchhHHHHHhc
Q 046476 7 DTVPHD----VAMDVLKILPEKARMRFKCVSKTWYSSIKGTILPLIVSFTN 53 (376)
Q Consensus 7 ~~LP~d----ll~~IL~rLp~~sl~r~r~VcK~W~~li~~~~~~F~~~~~~ 53 (376)
..||+| |+..||+.|++++|+++.+|||+|+.++.++ .+-+....
T Consensus 12 ~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~--~~w~~~~~ 60 (435)
T 1p22_A 12 TALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDG--MLWKKLIE 60 (435)
T ss_dssp HHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHT--THHHHHHH
T ss_pred HHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCh--HHHHHHHH
Confidence 469999 9999999999999999999999999999988 76665444
No 19
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.49 E-value=3.3e-06 Score=86.07 Aligned_cols=157 Identities=15% Similarity=0.125 Sum_probs=98.4
Q ss_pred CCeEEEEEcCCCCeeecCCCCCcceecCCceEE-CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeC----CCcccCcce
Q 046476 178 TPECEIFTLGTTSWRKIDAPPSRIHFRRQGLCA-NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKL----PDEVRKHHD 252 (376)
Q Consensus 178 ~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~----P~~~~~~~~ 252 (376)
...+++|+..+++|+.+...+ ........+.+ +|.+|.++..... . .+..||+.+++|..++. |.. .....
T Consensus 467 ~~dv~~yd~~t~~W~~~~~~p-~~R~~h~~~~~~~~~iyv~GG~~~~-~-~v~~yd~~t~~W~~~~~~g~~p~~-r~~~~ 542 (695)
T 2zwa_A 467 LSDNWIFDMKTREWSMIKSLS-HTRFRHSACSLPDGNVLILGGVTEG-P-AMLLYNVTEEIFKDVTPKDEFFQN-SLVSA 542 (695)
T ss_dssp CCCCEEEETTTTEEEECCCCS-BCCBSCEEEECTTSCEEEECCBCSS-C-SEEEEETTTTEEEECCCSSGGGGS-CCBSC
T ss_pred cccEEEEeCCCCcEEECCCCC-CCcccceEEEEcCCEEEEECCCCCC-C-CEEEEECCCCceEEccCCCCCCCc-cccee
Confidence 467999999999999997664 22224556665 9999999873221 2 79999999999998863 332 22333
Q ss_pred eEecC---CeEEEEEecCCCC-CCeEEEEEEccCCCCCCCc------eeEEEEEeecccccccCcEeEEEccCCcEEEEe
Q 046476 253 LIQAE---EKLGVLDCDDFRS-KNKIRVWILKDYGRGGGEV------WIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTE 322 (376)
Q Consensus 253 L~~~~---g~L~~~~~~~~~~-~~~~~IW~l~~~~~g~~~~------W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~ 322 (376)
.+.++ |+|+++....... ...-++|+++-. ... |+++.. .++.+. .....++.+++.|++.-
T Consensus 543 a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~----~~~w~~~~~W~~~~~-~p~~~R---~~~~~~~~~~~~iyv~G 614 (695)
T 2zwa_A 543 GLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYD----AENATEPITVIKKLQ-HPLFQR---YGSQIKYITPRKLLIVG 614 (695)
T ss_dssp EEEEETTTTEEEEECCBCTTSSCBCCEEEEEEEC----TTCSSCCEEEEEEEE-CGGGCC---BSCEEEEEETTEEEEEC
T ss_pred EEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEcc----CCccccceEEEEcCC-CCCCCc---ccceEEEeCCCEEEEEC
Confidence 33333 8999998652111 223456766643 234 777766 443222 11334444447766653
Q ss_pred ccc-----CCCcEEEEEeCCCCcEEEEEE
Q 046476 323 YKS-----SLVSRVFIYDLKTQERRAIKI 346 (376)
Q Consensus 323 ~~~-----~~~~~v~~ydl~t~~~~~v~~ 346 (376)
-.. .....+..||+++++|+.+.+
T Consensus 615 G~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 643 (695)
T 2zwa_A 615 GTSPSGLFDRTNSIISLDPLSETLTSIPI 643 (695)
T ss_dssp CBCSSCCCCTTTSEEEEETTTTEEEECCC
T ss_pred CccCCCCCCCCCeEEEEECCCCeEEEeec
Confidence 110 124679999999999996543
No 20
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.42 E-value=2.1e-05 Score=73.07 Aligned_cols=156 Identities=10% Similarity=0.013 Sum_probs=93.3
Q ss_pred CCeEEEEEcCCCCeeecCCCCCccee-cCCceEECceEEEEEeCCC-C-CCCEEEEEEc--CCceeEEEe-CCCcc-cCc
Q 046476 178 TPECEIFTLGTTSWRKIDAPPSRIHF-RRQGLCANGFIHWIITNPR-K-TKPVLAVFDV--KEEKFDIVK-LPDEV-RKH 250 (376)
Q Consensus 178 ~~~~~vys~~t~~Wr~~~~~~~~~~~-~~~~v~~~G~lywl~~~~~-~-~~~~il~fDl--~~e~~~~i~-~P~~~-~~~ 250 (376)
...+++|+..+++|+.+...+. ... ....+.++|.+|.++.... + ....+..||+ ++.+|+.++ +|... ...
T Consensus 167 ~~~v~~yd~~~~~W~~~~~~p~-~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~ 245 (357)
T 2uvk_A 167 NKFLLSFDPSTQQWSYAGESPW-YGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAG 245 (357)
T ss_dssp CCEEEEEETTTTEEEEEEECSS-CCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBS
T ss_pred cccEEEEeCCCCcEEECCCCCC-CCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccccc
Confidence 4789999999999999876542 122 3667788999999865210 0 1345778887 889999874 33322 234
Q ss_pred ceeEecCCeEEEEEecCCC----------------CCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEcc
Q 046476 251 HDLIQAEEKLGVLDCDDFR----------------SKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSN 314 (376)
Q Consensus 251 ~~L~~~~g~L~~~~~~~~~----------------~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~ 314 (376)
..++..+|+|+++...... ......+|+++- +...|+++.. ++.... . ... +.-
T Consensus 246 ~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~----~~~~W~~~~~-~p~~r~--~--~~~-~~~ 315 (357)
T 2uvk_A 246 GFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLW----HNGKWDKSGE-LSQGRA--Y--GVS-LPW 315 (357)
T ss_dssp CEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEEC----C---CEEEEE-CSSCCB--S--SEE-EEE
T ss_pred ceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEec----CCCceeeCCC-CCCCcc--c--cee-EEe
Confidence 4578889999998764210 112356777764 3578999866 553211 1 222 223
Q ss_pred CCcEEEEe-cccC--CCcEEEEEeCCCCcEEEE
Q 046476 315 NGEILLTE-YKSS--LVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 315 ~g~il~~~-~~~~--~~~~v~~ydl~t~~~~~v 344 (376)
++.|++.- .... ....++.++++++++.+.
T Consensus 316 ~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 316 NNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp TTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred CCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 56665543 1111 125789999999999765
No 21
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.70 E-value=0.00079 Score=68.00 Aligned_cols=204 Identities=8% Similarity=-0.026 Sum_probs=112.3
Q ss_pred EEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcccceecCCCCCeEE
Q 046476 103 EILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSYAWMIDNHGTPECE 182 (376)
Q Consensus 103 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (376)
.+.++||.|++|..++..+..+. .+ .....+..| =+++.+.... ...++
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~----~~-------~~~~~~~~~-----g~lyv~GG~~---------------~~~v~ 268 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHD----MF-------CPGISMDGN-----GQIVVTGGND---------------AKKTS 268 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCC----CS-------SCEEEECTT-----SCEEEECSSS---------------TTCEE
T ss_pred EEEEEeCCCCcEEeCcccCCCCC----Cc-------cccccCCCC-----CCEEEeCCCC---------------CCceE
Confidence 57899999999999876544331 00 011222111 1344443221 23799
Q ss_pred EEEcCCCCeeecCCCCCcceecCCceEE-CceEEEEEeCCCC--CCCEEEEEEcCCceeEEEeC----CCcccCcceeEe
Q 046476 183 IFTLGTTSWRKIDAPPSRIHFRRQGLCA-NGFIHWIITNPRK--TKPVLAVFDVKEEKFDIVKL----PDEVRKHHDLIQ 255 (376)
Q Consensus 183 vys~~t~~Wr~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~~--~~~~il~fDl~~e~~~~i~~----P~~~~~~~~L~~ 255 (376)
+|+..++.|..+...+ ........+.+ ||.+|.++....+ ....+..||+.+++|..++. |........+..
T Consensus 269 ~yd~~t~~W~~~~~~~-~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~ 347 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQ-VARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYR 347 (656)
T ss_dssp EEEGGGTEEEECCCCS-SCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGT
T ss_pred EecCcCCceeECCCCC-ccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceee
Confidence 9999999999987653 22224556677 9999999872111 13568999999999999841 211111223445
Q ss_pred cCCeEEEEEecCC-----CCCCeEEEEEEccCCCCCCCceeEEEEEeecc----cccccCcEeEEE-ccCCcEEEEeccc
Q 046476 256 AEEKLGVLDCDDF-----RSKNKIRVWILKDYGRGGGEVWIRRDYVFRFD----TIMFRPPIPVSN-SNNGEILLTEYKS 325 (376)
Q Consensus 256 ~~g~L~~~~~~~~-----~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~----~~~~~~~~~v~~-~~~g~il~~~~~~ 325 (376)
.+++++++..... .....+.. .+.. ...|..... .... ...-.....+.+ ..+++|++.--..
T Consensus 348 ~~~~iyv~Gg~~g~~~~~~~~~~v~~--yd~~----~~~w~~~~~-~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~ 420 (656)
T 1k3i_A 348 SDNHAWLFGWKKGSVFQAGPSTAMNW--YYTS----GSGDVKSAG-KRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSP 420 (656)
T ss_dssp TTCSCCEEECGGGCEEECCSSSEEEE--EECS----TTCEEEEEE-ECEETTEECCCCBTCEEEEEETTTTEEEEECCBS
T ss_pred cCCceEEEECCCCcEEEecCccceee--eecC----CcceeecCC-ccccccccCCCCCCCceEeccCCCCeEEEEeCCC
Confidence 6777777664310 11233444 4432 345665433 1211 000001122222 2367777654100
Q ss_pred --------CCCcEEEEEeCCCCcEEEEE
Q 046476 326 --------SLVSRVFIYDLKTQERRAIK 345 (376)
Q Consensus 326 --------~~~~~v~~ydl~t~~~~~v~ 345 (376)
.....+..||+++++|..+.
T Consensus 421 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 448 (656)
T 1k3i_A 421 DYQDSDATTNAHIITLGEPGTSPNTVFA 448 (656)
T ss_dssp SSSSSBCCCCEEEEECCSTTSCCEEEEC
T ss_pred CCCCCCcCCcceEEEcCCCCCCCeeEEc
Confidence 01117889999999998874
No 22
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.70 E-value=9.8e-06 Score=72.24 Aligned_cols=49 Identities=16% Similarity=0.327 Sum_probs=44.3
Q ss_pred CCCChHHHHHHHccCCcccccccccccccchhhhcCCchhHHHHHhccccC
Q 046476 7 DTVPHDVAMDVLKILPEKARMRFKCVSKTWYSSIKGTILPLIVSFTNSSFS 57 (376)
Q Consensus 7 ~~LP~dll~~IL~rLp~~sl~r~r~VcK~W~~li~~~~~~F~~~~~~~~~~ 57 (376)
+.||+||+..||+.|++++|+++.+|||+||.+..|+ ..-+.++.+..+
T Consensus 6 ~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~--~LWr~~l~rd~~ 54 (312)
T 3l2o_B 6 TRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDP--ILWRYFLLRDLP 54 (312)
T ss_dssp HHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCH--HHHHHHHHSSGG
T ss_pred HhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccc--hHHHHHHhccCC
Confidence 4699999999999999999999999999999999999 887777776543
No 23
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.66 E-value=0.00091 Score=68.07 Aligned_cols=158 Identities=8% Similarity=-0.031 Sum_probs=102.1
Q ss_pred CCeEEEEEcCCCCeeecC-CC----CCcceecCCceEE--CceEEEEEeCCCC--CCCEEEEEEcCCceeEEEe-CCCcc
Q 046476 178 TPECEIFTLGTTSWRKID-AP----PSRIHFRRQGLCA--NGFIHWIITNPRK--TKPVLAVFDVKEEKFDIVK-LPDEV 247 (376)
Q Consensus 178 ~~~~~vys~~t~~Wr~~~-~~----~~~~~~~~~~v~~--~G~lywl~~~~~~--~~~~il~fDl~~e~~~~i~-~P~~~ 247 (376)
...+++|+..+++|+.+. .. .|........+.+ +|.+|.++..... ....+..||+.+.+|+.++ +|..
T Consensus 411 ~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~- 489 (695)
T 2zwa_A 411 VNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHT- 489 (695)
T ss_dssp CCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBC-
T ss_pred cCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCC-
Confidence 567999999999999987 42 1222225677888 9999999863221 1346899999999999884 3433
Q ss_pred cCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEe-EEEccC-CcEEEEecc
Q 046476 248 RKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIP-VSNSNN-GEILLTEYK 324 (376)
Q Consensus 248 ~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~-v~~~~~-g~il~~~~~ 324 (376)
......+.+ +|+|+++..... .. .+|+++-. ...|++... .+..+.. +.... +.+..+ +.|++.--.
T Consensus 490 R~~h~~~~~~~~~iyv~GG~~~--~~--~v~~yd~~----t~~W~~~~~-~g~~p~~-r~~~~a~v~~~~~~~iyv~GG~ 559 (695)
T 2zwa_A 490 RFRHSACSLPDGNVLILGGVTE--GP--AMLLYNVT----EEIFKDVTP-KDEFFQN-SLVSAGLEFDPVSKQGIILGGG 559 (695)
T ss_dssp CBSCEEEECTTSCEEEECCBCS--SC--SEEEEETT----TTEEEECCC-SSGGGGS-CCBSCEEEEETTTTEEEEECCB
T ss_pred cccceEEEEcCCEEEEECCCCC--CC--CEEEEECC----CCceEEccC-CCCCCCc-ccceeEEEEeCCCCEEEEECCc
Confidence 345566664 999999987631 22 78888753 578998755 3323321 11122 233333 566655311
Q ss_pred c----CCCcEEEEEeCCCCc------EEEEEE
Q 046476 325 S----SLVSRVFIYDLKTQE------RRAIKI 346 (376)
Q Consensus 325 ~----~~~~~v~~ydl~t~~------~~~v~~ 346 (376)
. .....+..||+++++ |+.+.-
T Consensus 560 ~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~ 591 (695)
T 2zwa_A 560 FMDQTTVSDKAIIFKYDAENATEPITVIKKLQ 591 (695)
T ss_dssp CTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE
T ss_pred CCCCCeeeCcEEEEEccCCccccceEEEEcCC
Confidence 0 113679999999999 787754
No 24
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.54 E-value=0.00067 Score=68.52 Aligned_cols=152 Identities=7% Similarity=-0.052 Sum_probs=88.4
Q ss_pred CeEEEEEcCCCCeeecCCCCCcceecCCc-e-EECceEEEEEeCCCCCCCEEEEEEcCCceeEEEe-CCCcccCcceeEe
Q 046476 179 PECEIFTLGTTSWRKIDAPPSRIHFRRQG-L-CANGFIHWIITNPRKTKPVLAVFDVKEEKFDIVK-LPDEVRKHHDLIQ 255 (376)
Q Consensus 179 ~~~~vys~~t~~Wr~~~~~~~~~~~~~~~-v-~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~-~P~~~~~~~~L~~ 255 (376)
..+++|+..+++|+.+...+........+ + ..||.+|..+.. . ...+..||+.+++|..++ +|.. ......+.
T Consensus 219 ~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~--~-~~~v~~yd~~t~~W~~~~~~~~~-R~~~s~~~ 294 (656)
T 1k3i_A 219 TLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGN--D-AKKTSLYDSSSDSWIPGPDMQVA-RGYQSSAT 294 (656)
T ss_dssp EEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSS--S-TTCEEEEEGGGTEEEECCCCSSC-CSSCEEEE
T ss_pred EEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCC--C-CCceEEecCcCCceeECCCCCcc-ccccceEE
Confidence 46899999999999876543111112222 2 358999999862 2 346999999999999874 3332 44566777
Q ss_pred c-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEee--ccccc-------ccCcEeEEEccCCcEEEEeccc
Q 046476 256 A-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFR--FDTIM-------FRPPIPVSNSNNGEILLTEYKS 325 (376)
Q Consensus 256 ~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~--~~~~~-------~~~~~~v~~~~~g~il~~~~~~ 325 (376)
+ +|+|+++....+.....-.+|+.+- ....|+.+.. .. +.... .+...-+.-..+|.++...
T Consensus 295 ~~dg~iyv~GG~~~~~~~~~~~e~yd~----~t~~W~~~~~-~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~--- 366 (656)
T 1k3i_A 295 MSDGRVFTIGGSWSGGVFEKNGEVYSP----SSKTWTSLPN-AKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAG--- 366 (656)
T ss_dssp CTTSCEEEECCCCCSSSCCCCEEEEET----TTTEEEEETT-SCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECC---
T ss_pred ecCCeEEEEeCcccCCcccccceEeCC----CCCcceeCCC-ccccccccccccceeecCCceEEEECCCCcEEEec---
Confidence 7 9999999873211112223444443 2467988522 11 11100 0100111112244444332
Q ss_pred CCCcEEEEEeCCCCcEEE
Q 046476 326 SLVSRVFIYDLKTQERRA 343 (376)
Q Consensus 326 ~~~~~v~~ydl~t~~~~~ 343 (376)
....+..||+++++|..
T Consensus 367 -~~~~v~~yd~~~~~w~~ 383 (656)
T 1k3i_A 367 -PSTAMNWYYTSGSGDVK 383 (656)
T ss_dssp -SSSEEEEEECSTTCEEE
T ss_pred -CccceeeeecCCcceee
Confidence 45689999999998754
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.41 E-value=4.9e-05 Score=69.91 Aligned_cols=40 Identities=18% Similarity=0.395 Sum_probs=37.5
Q ss_pred CCCCCCChHHHHHHHccCCcccccccccccccchhhhcCC
Q 046476 4 KRRDTVPHDVAMDVLKILPEKARMRFKCVSKTWYSSIKGT 43 (376)
Q Consensus 4 ~~~~~LP~dll~~IL~rLp~~sl~r~r~VcK~W~~li~~~ 43 (376)
...+.||+|++.+||.+|+.+++.+++.|||+|+.++.+|
T Consensus 7 ~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~ 46 (336)
T 2ast_B 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDE 46 (336)
T ss_dssp CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCS
T ss_pred CChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCc
Confidence 4467899999999999999999999999999999999888
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.25 E-value=6.1e-05 Score=74.87 Aligned_cols=39 Identities=26% Similarity=0.511 Sum_probs=29.5
Q ss_pred CCCCCCCCCChHHHHHHHccCC-cccccccccccccchhh
Q 046476 1 MENKRRDTVPHDVAMDVLKILP-EKARMRFKCVSKTWYSS 39 (376)
Q Consensus 1 m~~~~~~~LP~dll~~IL~rLp-~~sl~r~r~VcK~W~~l 39 (376)
|+...++.||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 1 ~~~d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 1 MQKRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ---------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred CcccchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 7777789999999999999999 99999999999999988
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.24 E-value=0.001 Score=65.88 Aligned_cols=34 Identities=21% Similarity=0.298 Sum_probs=31.9
Q ss_pred CCCChHHHHHHHccC-Ccccccccccccccchhhh
Q 046476 7 DTVPHDVAMDVLKIL-PEKARMRFKCVSKTWYSSI 40 (376)
Q Consensus 7 ~~LP~dll~~IL~rL-p~~sl~r~r~VcK~W~~li 40 (376)
..||+|++.+||.+| |.+++.++..|||+|+.+.
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~~ 48 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKID 48 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHhh
Confidence 479999999999999 8999999999999999873
No 28
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.08 E-value=0.91 Score=42.23 Aligned_cols=200 Identities=11% Similarity=0.102 Sum_probs=100.0
Q ss_pred cccceEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCc
Q 046476 89 LINGFICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSS 168 (376)
Q Consensus 89 s~nGLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~ 168 (376)
|.+++|.+. .++.++|||..|++...+-...... .....+.+.|. +.|-++ ...
T Consensus 114 S~~n~lAvg--ld~tV~lWd~~tg~~~~~~~~~~~~--------------~~V~sv~fspd-g~~las--gs~------- 167 (420)
T 4gga_A 114 SSGNVLAVA--LDNSVYLWSASSGDILQLLQMEQPG--------------EYISSVAWIKE-GNYLAV--GTS------- 167 (420)
T ss_dssp CTTSEEEEE--ETTEEEEEETTTCCEEEEEECCSTT--------------CCEEEEEECTT-SSEEEE--EET-------
T ss_pred CCCCEEEEE--eCCEEEEEECCCCCEEEEEEecCCC--------------CcEEEEEECCC-CCEEEE--EEC-------
Confidence 456777666 5788999999999887643322111 13344555553 333222 221
Q ss_pred ccceecCCCCCeEEEEEcCCCCeeecCCCCCccee-cCCceEECceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcc
Q 046476 169 YAWMIDNHGTPECEIFTLGTTSWRKIDAPPSRIHF-RRQGLCANGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEV 247 (376)
Q Consensus 169 ~~~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~-~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~ 247 (376)
...+.+++..++.--..... +. ...++..+|.+-..+. ....+..+|..........+....
T Consensus 168 ---------Dg~v~iWd~~~~~~~~~~~~----h~~~v~~~s~~~~~l~sgs----~d~~i~~~d~~~~~~~~~~~~~h~ 230 (420)
T 4gga_A 168 ---------SAEVQLWDVQQQKRLRNMTS----HSARVGSLSWNSYILSSGS----RSGHIHHHDVRVAEHHVATLSGHS 230 (420)
T ss_dssp ---------TSCEEEEETTTTEEEEEECC----CSSCEEEEEEETTEEEEEE----TTSEEEEEETTSSSCEEEEEECCS
T ss_pred ---------CCeEEEEEcCCCcEEEEEeC----CCCceEEEeeCCCEEEEEe----CCCceeEeeecccceeeEEecccc
Confidence 45678888877642111111 11 1223444554433333 167788888876544333222111
Q ss_pred cCcceeE-ecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccC-CcEEEEeccc
Q 046476 248 RKHHDLI-QAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNN-GEILLTEYKS 325 (376)
Q Consensus 248 ~~~~~L~-~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~-g~il~~~~~~ 325 (376)
.....+. .-+|...+.... ...+.||-+... +..+..... .....- ....+++... +.++... ..
T Consensus 231 ~~~~~~~~~~~g~~l~s~~~----D~~v~i~~~~~~----~~~~~~~~~-~~~~~~---~V~~~~~~p~~~~~la~~-~g 297 (420)
T 4gga_A 231 QEVCGLRWAPDGRHLASGGN----DNLVNVWPSAPG----EGGWVPLQT-FTQHQG---AVKAVAWCPWQSNVLATG-GG 297 (420)
T ss_dssp SCEEEEEECTTSSEEEEEET----TSCEEEEESSCC----SSCSCCSEE-ECCCSS---CEEEEEECTTCTTEEEEE-EC
T ss_pred cceeeeeecCCCCeeeeeec----cccceEEeeccc----cccceeeee-ecccCC---ceeeeeeCCCcccEEEEE-ee
Confidence 1111222 225555444443 678899987653 222332223 222111 1234444443 3444432 12
Q ss_pred CCCcEEEEEeCCCCcEEEE
Q 046476 326 SLVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 326 ~~~~~v~~ydl~t~~~~~v 344 (376)
+.++.|.+||+++++....
T Consensus 298 s~D~~I~iwd~~t~~~~~~ 316 (420)
T 4gga_A 298 TSDRHIRIWNVCSGACLSA 316 (420)
T ss_dssp TTTCEEEEEETTTTEEEEE
T ss_pred cCCCEEEEEeCCcccccee
Confidence 3567888999988766543
No 29
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.32 E-value=0.94 Score=40.75 Aligned_cols=141 Identities=11% Similarity=0.106 Sum_probs=74.3
Q ss_pred CeEEEEEcCCCCeeecCCCCCcceecCCceEE--C--ceEEEEEeCCCCCCCEEEEEEcCCcee-EEEeCCCcccCccee
Q 046476 179 PECEIFTLGTTSWRKIDAPPSRIHFRRQGLCA--N--GFIHWIITNPRKTKPVLAVFDVKEEKF-DIVKLPDEVRKHHDL 253 (376)
Q Consensus 179 ~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~--~--G~lywl~~~~~~~~~~il~fDl~~e~~-~~i~~P~~~~~~~~L 253 (376)
..+.+|+..++.|..+........ .-..+.+ + |.+...+. .++.|..||+.+... ..+.+.........+
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~l~~~~----~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~ 153 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAVHSA-SVNSVQWAPHEYGPLLLVAS----SDGKVSVVEFKENGTTSPIIIDAHAIGVNSA 153 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSS-CEEEEEECCGGGCSEEEEEE----TTSEEEEEECCTTSCCCEEEEECCTTCEEEE
T ss_pred CEEEEEEcCCCceeEeeeecCCCc-ceEEEEeCCCCCCCEEEEec----CCCcEEEEecCCCCceeeEEecCCCCceEEE
Confidence 567888888887765432211000 1111222 2 33333333 167889999887622 211111110011112
Q ss_pred Eec--------------CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccC---C
Q 046476 254 IQA--------------EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNN---G 316 (376)
Q Consensus 254 ~~~--------------~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~---g 316 (376)
.-. ++.+.++... ...+.||-+... ...|..... +..+.. ....+++.++ +
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~----~~~~~~~~~-~~~h~~---~v~~~~~sp~~~~~ 221 (379)
T 3jrp_A 154 SWAPATIEEDGEHNGTKESRKFVTGGA----DNLVKIWKYNSD----AQTYVLEST-LEGHSD---WVRDVAWSPTVLLR 221 (379)
T ss_dssp EECCCC----------CTTCEEEEEET----TSCEEEEEEETT----TTEEEEEEE-ECCCSS---CEEEEEECCCCSSS
T ss_pred EEcCccccccccccCCCCCCEEEEEeC----CCeEEEEEecCC----CcceeeEEE-EecccC---cEeEEEECCCCCCC
Confidence 111 4666555554 678999998753 456777666 443322 2245566666 6
Q ss_pred cEEEEecccCCCcEEEEEeCCCC
Q 046476 317 EILLTEYKSSLVSRVFIYDLKTQ 339 (376)
Q Consensus 317 ~il~~~~~~~~~~~v~~ydl~t~ 339 (376)
.+++... .++.+.+||+++.
T Consensus 222 ~~l~s~~---~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 222 SYLASVS---QDRTCIIWTQDNE 241 (379)
T ss_dssp EEEEEEE---TTSCEEEEEESST
T ss_pred CeEEEEe---CCCEEEEEeCCCC
Confidence 6665542 5778888888875
No 30
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=94.82 E-value=1.8 Score=37.48 Aligned_cols=190 Identities=12% Similarity=0.087 Sum_probs=97.2
Q ss_pred cccceEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCc
Q 046476 89 LINGFICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSS 168 (376)
Q Consensus 89 s~nGLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~ 168 (376)
..+|-+.+.......++++|| +++......+... ....++.+|+... +.... ..
T Consensus 107 ~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~---------------~~~~~i~~~~~g~---l~v~~-~~------ 160 (299)
T 2z2n_A 107 GPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKG---------------SYPSFITLGSDNA---LWFTE-NQ------ 160 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTT---------------CCEEEEEECTTSC---EEEEE-TT------
T ss_pred CCCCCEEEEecCCceEEEECC-CCCEEEecCCCCC---------------CCCceEEEcCCCC---EEEEe-CC------
Confidence 346666665434567888999 7766544322111 1345566665432 22211 11
Q ss_pred ccceecCCCCCeEEEEEcCCCCeeecCCCCCcceecCCceEE--CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCc
Q 046476 169 YAWMIDNHGTPECEIFTLGTTSWRKIDAPPSRIHFRRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDE 246 (376)
Q Consensus 169 ~~~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~ 246 (376)
...+.+|+. ++.......... .....++.+ +|.+|+... . ...|..||+ +.++..+..|..
T Consensus 161 ---------~~~i~~~~~-~g~~~~~~~~~~--~~~~~~i~~~~~g~l~v~~~---~-~~~i~~~~~-~g~~~~~~~~~~ 223 (299)
T 2z2n_A 161 ---------NNAIGRITE-SGDITEFKIPTP--ASGPVGITKGNDDALWFVEI---I-GNKIGRITT-SGEITEFKIPTP 223 (299)
T ss_dssp ---------TTEEEEECT-TCCEEEEECSST--TCCEEEEEECTTSSEEEEET---T-TTEEEEECT-TCCEEEEECSST
T ss_pred ---------CCEEEEEcC-CCcEEEeeCCCC--CCcceeEEECCCCCEEEEcc---C-CceEEEECC-CCcEEEEECCCC
Confidence 245666666 565554321110 001123334 478755443 1 568999999 777777766643
Q ss_pred ccCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEeccc
Q 046476 247 VRKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKS 325 (376)
Q Consensus 247 ~~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~ 325 (376)
......+... +|.|++.... ...+.+| +..+ . ...+. ++. .. .....+++ .+|.+++..
T Consensus 224 ~~~~~~i~~~~~g~l~v~~~~----~~~i~~~--d~~g-----~-~~~~~-~~~-~~--~~~~~i~~-~~g~l~v~~--- 283 (299)
T 2z2n_A 224 NARPHAITAGAGIDLWFTEWG----ANKIGRL--TSNN-----I-IEEYP-IQI-KS--AEPHGICF-DGETIWFAM--- 283 (299)
T ss_dssp TCCEEEEEECSTTCEEEEETT----TTEEEEE--ETTT-----E-EEEEE-CSS-SS--CCEEEEEE-CSSCEEEEE---
T ss_pred CCCceeEEECCCCCEEEeccC----CceEEEE--CCCC-----c-eEEEe-CCC-CC--CccceEEe-cCCCEEEEe---
Confidence 2222334433 6788777643 3444444 3221 1 11222 221 11 12244566 788999887
Q ss_pred CCCcEEEEEeCCCCcEE
Q 046476 326 SLVSRVFIYDLKTQERR 342 (376)
Q Consensus 326 ~~~~~v~~ydl~t~~~~ 342 (376)
..+.+..+|+++++++
T Consensus 284 -~~~~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 284 -ECDKIGKLTLIKDNME 299 (299)
T ss_dssp -TTTEEEEEEEC-----
T ss_pred -cCCcEEEEEcCcccCC
Confidence 5789999999987653
No 31
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=94.23 E-value=3.3 Score=38.02 Aligned_cols=190 Identities=11% Similarity=0.070 Sum_probs=97.7
Q ss_pred cceEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCccc
Q 046476 91 NGFICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSYA 170 (376)
Q Consensus 91 nGLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~ 170 (376)
+.++... .++.+.|||..+++...+-..... .....+.+.|. +.+ +.....
T Consensus 104 ~~l~~~~--~d~~v~lw~~~~~~~~~~~~~~~~---------------~~v~~v~~s~~-~~~--l~~~~~--------- 154 (401)
T 4aez_A 104 LNVVAVA--LERNVYVWNADSGSVSALAETDES---------------TYVASVKWSHD-GSF--LSVGLG--------- 154 (401)
T ss_dssp TSEEEEE--ETTEEEEEETTTCCEEEEEECCTT---------------CCEEEEEECTT-SSE--EEEEET---------
T ss_pred CCEEEEE--CCCeEEEeeCCCCcEeEeeecCCC---------------CCEEEEEECCC-CCE--EEEECC---------
Confidence 4455444 678899999999987654333211 13445556663 333 222221
Q ss_pred ceecCCCCCeEEEEEcCCCCeeecCCCCCccee-cCCceEECceEEEEEeCCCCCCCEEEEEEcCCce--eEEEeCCCcc
Q 046476 171 WMIDNHGTPECEIFTLGTTSWRKIDAPPSRIHF-RRQGLCANGFIHWIITNPRKTKPVLAVFDVKEEK--FDIVKLPDEV 247 (376)
Q Consensus 171 ~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~-~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~--~~~i~~P~~~ 247 (376)
...+.+|+..++.-...-.. +. .-..+..+|.....+. .++.|..+|+.... ...+.....
T Consensus 155 -------dg~i~iwd~~~~~~~~~~~~----~~~~v~~~~~~~~~l~~~~----~dg~i~i~d~~~~~~~~~~~~~~~~- 218 (401)
T 4aez_A 155 -------NGLVDIYDVESQTKLRTMAG----HQARVGCLSWNRHVLSSGS----RSGAIHHHDVRIANHQIGTLQGHSS- 218 (401)
T ss_dssp -------TSCEEEEETTTCCEEEEECC----CSSCEEEEEEETTEEEEEE----TTSEEEEEETTSSSCEEEEEECCSS-
T ss_pred -------CCeEEEEECcCCeEEEEecC----CCCceEEEEECCCEEEEEc----CCCCEEEEecccCcceeeEEcCCCC-
Confidence 34678888877643221111 11 1123334555444444 27889999998433 222222211
Q ss_pred cCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCC-cEEEEeccc
Q 046476 248 RKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNG-EILLTEYKS 325 (376)
Q Consensus 248 ~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g-~il~~~~~~ 325 (376)
.-..+.-. +|.+.++... ...+.||-+... ..... +..+.. ....+++..++ .++... ..
T Consensus 219 -~v~~~~~~~~~~~l~s~~~----d~~v~iwd~~~~--------~~~~~-~~~~~~---~v~~~~~~p~~~~ll~~~-~g 280 (401)
T 4aez_A 219 -EVCGLAWRSDGLQLASGGN----DNVVQIWDARSS--------IPKFT-KTNHNA---AVKAVAWCPWQSNLLATG-GG 280 (401)
T ss_dssp -CEEEEEECTTSSEEEEEET----TSCEEEEETTCS--------SEEEE-ECCCSS---CCCEEEECTTSTTEEEEE-CC
T ss_pred -CeeEEEEcCCCCEEEEEeC----CCeEEEccCCCC--------CccEE-ecCCcc---eEEEEEECCCCCCEEEEe-cC
Confidence 11222222 5665555544 678999977642 12223 222221 22456666654 455543 01
Q ss_pred CCCcEEEEEeCCCCcEEE
Q 046476 326 SLVSRVFIYDLKTQERRA 343 (376)
Q Consensus 326 ~~~~~v~~ydl~t~~~~~ 343 (376)
..++.+.+||+++++...
T Consensus 281 s~d~~i~i~d~~~~~~~~ 298 (401)
T 4aez_A 281 TMDKQIHFWNAATGARVN 298 (401)
T ss_dssp TTTCEEEEEETTTCCEEE
T ss_pred CCCCEEEEEECCCCCEEE
Confidence 147889999998776543
No 32
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=93.79 E-value=3.7 Score=37.12 Aligned_cols=188 Identities=10% Similarity=0.007 Sum_probs=99.8
Q ss_pred cCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcccceecCCCCC
Q 046476 100 VGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSYAWMIDNHGTP 179 (376)
Q Consensus 100 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~~~ 179 (376)
.+..+.|||..+++....-...... .....+.+.|..+.+ + ..... ..
T Consensus 94 ~dg~i~iwd~~~~~~~~~~~~~~h~--------------~~v~~~~~~~~~~~~-l-~s~~~----------------d~ 141 (383)
T 3ei3_B 94 KGGDIILWDYDVQNKTSFIQGMGPG--------------DAITGMKFNQFNTNQ-L-FVSSI----------------RG 141 (383)
T ss_dssp BTSCEEEEETTSTTCEEEECCCSTT--------------CBEEEEEEETTEEEE-E-EEEET----------------TT
T ss_pred CCCeEEEEeCCCcccceeeecCCcC--------------CceeEEEeCCCCCCE-E-EEEeC----------------CC
Confidence 6677999999988765443221111 144455555532232 2 22211 35
Q ss_pred eEEEEEcCCCCeeecCCCCCccee-cCCceEECceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcccCcceeEec-C
Q 046476 180 ECEIFTLGTTSWRKIDAPPSRIHF-RRQGLCANGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQA-E 257 (376)
Q Consensus 180 ~~~vys~~t~~Wr~~~~~~~~~~~-~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~~-~ 257 (376)
.+.+++..+...+........... ..-...-+|.....+. .++.|..+|+..+....+..... .-..+.-. +
T Consensus 142 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~d~~i~i~d~~~~~~~~~~~h~~--~v~~~~~~~~ 215 (383)
T 3ei3_B 142 ATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGD----STGRLLLLGLDGHEIFKEKLHKA--KVTHAEFNPR 215 (383)
T ss_dssp EEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEE----TTSEEEEEETTSCEEEEEECSSS--CEEEEEECSS
T ss_pred EEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEEC----CCCCEEEEECCCCEEEEeccCCC--cEEEEEECCC
Confidence 678888877655544332110000 1111122454444443 16789999997666665554332 12222222 4
Q ss_pred Ce-EEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEcc-CCcEEEEecccCCCcEEEEEe
Q 046476 258 EK-LGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSN-NGEILLTEYKSSLVSRVFIYD 335 (376)
Q Consensus 258 g~-L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~-~g~il~~~~~~~~~~~v~~yd 335 (376)
|. +.+.... ...+.||-+.... ..-..... ++. . .....+++.. ++..++... .++.+.+||
T Consensus 216 ~~~~l~s~~~----d~~i~iwd~~~~~----~~~~~~~~-~~~-~---~~v~~~~~s~~~~~~l~~~~---~d~~i~iwd 279 (383)
T 3ei3_B 216 CDWLMATSSV----DATVKLWDLRNIK----DKNSYIAE-MPH-E---KPVNAAYFNPTDSTKLLTTD---QRNEIRVYS 279 (383)
T ss_dssp CTTEEEEEET----TSEEEEEEGGGCC----STTCEEEE-EEC-S---SCEEEEEECTTTSCEEEEEE---SSSEEEEEE
T ss_pred CCCEEEEEeC----CCEEEEEeCCCCC----cccceEEE-ecC-C---CceEEEEEcCCCCCEEEEEc---CCCcEEEEE
Confidence 54 5555544 6789999987642 12223333 332 1 1225567777 787766552 678999999
Q ss_pred CCCCcE
Q 046476 336 LKTQER 341 (376)
Q Consensus 336 l~t~~~ 341 (376)
+++.+.
T Consensus 280 ~~~~~~ 285 (383)
T 3ei3_B 280 SYDWSK 285 (383)
T ss_dssp TTBTTS
T ss_pred CCCCcc
Confidence 987644
No 33
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.75 E-value=1.9 Score=43.73 Aligned_cols=139 Identities=13% Similarity=0.120 Sum_probs=73.7
Q ss_pred CCeEEEEEcCCCCeeecCCCCCccee-cCCceEE--C--ceEEEEEeCCCCCCCEEEEEEcCCcee---EEEeCCCcccC
Q 046476 178 TPECEIFTLGTTSWRKIDAPPSRIHF-RRQGLCA--N--GFIHWIITNPRKTKPVLAVFDVKEEKF---DIVKLPDEVRK 249 (376)
Q Consensus 178 ~~~~~vys~~t~~Wr~~~~~~~~~~~-~~~~v~~--~--G~lywl~~~~~~~~~~il~fDl~~e~~---~~i~~P~~~~~ 249 (376)
...+.+|+..++.|..+..... +. .-.++.+ + |.....+. .++.|..||+.+..- ..+..... .
T Consensus 76 Dg~I~vwd~~~~~~~~~~~~~~--h~~~V~~v~~sp~~~~~~l~sgs----~dg~I~vwdl~~~~~~~~~~~~~~~~--~ 147 (753)
T 3jro_A 76 DGKVLIWKEENGRWSQIAVHAV--HSASVNSVQWAPHEYGPLLLVAS----SDGKVSVVEFKENGTTSPIIIDAHAI--G 147 (753)
T ss_dssp TSCEEEEEEETTEEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEE----TTSEEEEEECCSSSCCCCEEEECCSS--C
T ss_pred CCeEEEEECCCCcccccccccC--CCCCeEEEEECCCCCCCEEEEEe----CCCcEEEEEeecCCCcceeEeecCCC--c
Confidence 3567888888887655432211 11 1111222 2 44444443 167888999877521 11111110 1
Q ss_pred cceeEec--------------CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccC
Q 046476 250 HHDLIQA--------------EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNN 315 (376)
Q Consensus 250 ~~~L~~~--------------~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~ 315 (376)
...+.-. +|.+.++... ...+.||-+... ...+..... +..+.. ....+++.++
T Consensus 148 v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~----dg~I~iwd~~~~----~~~~~~~~~-~~~h~~---~V~~l~~sp~ 215 (753)
T 3jro_A 148 VNSASWAPATIEEDGEHNGTKESRKFVTGGA----DNLVKIWKYNSD----AQTYVLEST-LEGHSD---WVRDVAWSPT 215 (753)
T ss_dssp EEEEEECCCC---------CGGGCCEEEEET----TSCEEEEEEETT----TTEEEEEEE-ECCCSS---CEEEEEECCC
T ss_pred eEEEEecCcccccccccccCCCCCEEEEEEC----CCeEEEEeccCC----cccceeeee-ecCCCC---cEEEEEeccC
Confidence 1111111 3555555544 678999998764 455666666 443332 2245566666
Q ss_pred ---CcEEEEecccCCCcEEEEEeCCCC
Q 046476 316 ---GEILLTEYKSSLVSRVFIYDLKTQ 339 (376)
Q Consensus 316 ---g~il~~~~~~~~~~~v~~ydl~t~ 339 (376)
+.+++... .++.+.+||++++
T Consensus 216 ~~~~~~l~s~s---~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 216 VLLRSYLASVS---QDRTCIIWTQDNE 239 (753)
T ss_dssp CSSSEEEEEEE---SSSCEEEEEESSS
T ss_pred CCCCCEEEEEe---cCCEEEEecCCCC
Confidence 67666552 5778888988875
No 34
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=92.86 E-value=5 Score=35.79 Aligned_cols=204 Identities=11% Similarity=-0.051 Sum_probs=97.2
Q ss_pred cccceEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCc
Q 046476 89 LINGFICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSS 168 (376)
Q Consensus 89 s~nGLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~ 168 (376)
+.+|-+++....+..+.|||..++++..+-...... .....+.+.|. +.+- +. ...
T Consensus 17 s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~--------------~~v~~~~~~~~-~~~l-~~-~~~------- 72 (372)
T 1k8k_C 17 NKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHN--------------GQVTGVDWAPD-SNRI-VT-CGT------- 72 (372)
T ss_dssp CTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCS--------------SCEEEEEEETT-TTEE-EE-EET-------
T ss_pred CCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCC--------------CcccEEEEeCC-CCEE-EE-EcC-------
Confidence 334544444336778999999888532221111111 13445555663 3332 22 211
Q ss_pred ccceecCCCCCeEEEEEcCCCCeeecCCCCCcceecCCceEE--CceEEEEEeCCCCCCCEEEEEEcCCce----eEEEe
Q 046476 169 YAWMIDNHGTPECEIFTLGTTSWRKIDAPPSRIHFRRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKEEK----FDIVK 242 (376)
Q Consensus 169 ~~~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~----~~~i~ 242 (376)
...+.+|+..++.+........... .-..+.+ +|.....+. .++.|..||+.+.+ ...+.
T Consensus 73 ---------dg~i~vwd~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~----~d~~v~i~d~~~~~~~~~~~~~~ 138 (372)
T 1k8k_C 73 ---------DRNAYVWTLKGRTWKPTLVILRINR-AARCVRWAPNEKKFAVGS----GSRVISICYFEQENDWWVCKHIK 138 (372)
T ss_dssp ---------TSCEEEEEEETTEEEEEEECCCCSS-CEEEEEECTTSSEEEEEE----TTSSEEEEEEETTTTEEEEEEEC
T ss_pred ---------CCeEEEEECCCCeeeeeEEeecCCC-ceeEEEECCCCCEEEEEe----CCCEEEEEEecCCCcceeeeeee
Confidence 3567888888876654322110000 0111111 454444443 15668888887654 22222
Q ss_pred CCCcccCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCC---CCCCcee-------EEEEEeecccccccCcEeEE
Q 046476 243 LPDEVRKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGR---GGGEVWI-------RRDYVFRFDTIMFRPPIPVS 311 (376)
Q Consensus 243 ~P~~~~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~---g~~~~W~-------~~~~ii~~~~~~~~~~~~v~ 311 (376)
.+.. .....+.-. +|.+.++... ...+.||-+..... .....|. .... +..+. .....++
T Consensus 139 ~~~~-~~i~~~~~~~~~~~l~~~~~----dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~v~~~~ 209 (372)
T 1k8k_C 139 KPIR-STVLSLDWHPNSVLLAAGSC----DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFE-SSSSC---GWVHGVC 209 (372)
T ss_dssp TTCC-SCEEEEEECTTSSEEEEEET----TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEE-CCCCS---SCEEEEE
T ss_pred cccC-CCeeEEEEcCCCCEEEEEcC----CCCEEEEEcccccccccccccccccccchhhheEe-cCCCC---CeEEEEE
Confidence 2211 112222222 5655555444 67889998642110 0112222 2222 22111 1224456
Q ss_pred EccCCcEEEEecccCCCcEEEEEeCCCCcEE
Q 046476 312 NSNNGEILLTEYKSSLVSRVFIYDLKTQERR 342 (376)
Q Consensus 312 ~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~ 342 (376)
+..++..++... .++.+.+||+++++..
T Consensus 210 ~~~~~~~l~~~~---~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 210 FSANGSRVAWVS---HDSTVCLADADKKMAV 237 (372)
T ss_dssp ECSSSSEEEEEE---TTTEEEEEEGGGTTEE
T ss_pred ECCCCCEEEEEe---CCCEEEEEECCCCcee
Confidence 667776665542 6788999999877654
No 35
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=92.66 E-value=1.2 Score=41.75 Aligned_cols=195 Identities=12% Similarity=0.074 Sum_probs=92.9
Q ss_pred cc-eEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcc
Q 046476 91 NG-FICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSY 169 (376)
Q Consensus 91 nG-Ll~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~ 169 (376)
++ +|.... .++.+.|||..+++...+-..... . .....+.|.|..+.+ ++....
T Consensus 131 ~~~~lasGs-~dg~i~lWd~~~~~~~~~~~~~gH--------~------~~V~~l~f~p~~~~~-l~s~s~--------- 185 (435)
T 4e54_B 131 HPSTVAVGS-KGGDIMLWNFGIKDKPTFIKGIGA--------G------GSITGLKFNPLNTNQ-FYASSM--------- 185 (435)
T ss_dssp CTTCEEEEE-TTSCEEEECSSCCSCCEEECCCSS--------S------CCCCEEEECSSCTTE-EEEECS---------
T ss_pred CCCEEEEEe-CCCEEEEEECCCCCceeEEEccCC--------C------CCEEEEEEeCCCCCE-EEEEeC---------
Confidence 44 444433 667899999988865432211110 1 133445566654443 222211
Q ss_pred cceecCCCCCeEEEEEcCCCCeeecCCCCCcceecCCce--EECceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcc
Q 046476 170 AWMIDNHGTPECEIFTLGTTSWRKIDAPPSRIHFRRQGL--CANGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEV 247 (376)
Q Consensus 170 ~~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v--~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~ 247 (376)
...+.+++.+++.-+.......... ...++ .-+|.+...+. ..+.|..+|+..+....+.....
T Consensus 186 --------D~~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~g~----~dg~i~~wd~~~~~~~~~~~h~~- 251 (435)
T 4e54_B 186 --------EGTTRLQDFKGNILRVFASSDTINI-WFCSLDVSASSRMVVTGD----NVGNVILLNMDGKELWNLRMHKK- 251 (435)
T ss_dssp --------SSCEEEEETTSCEEEEEECCSSCSC-CCCCEEEETTTTEEEEEC----SSSBEEEEESSSCBCCCSBCCSS-
T ss_pred --------CCEEEEeeccCCceeEEeccCCCCc-cEEEEEECCCCCEEEEEe----CCCcEeeeccCcceeEEEecccc-
Confidence 3457778877765544322211000 11122 22455444443 16778999987654433222111
Q ss_pred cCcceeEec-CCe-EEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEeccc
Q 046476 248 RKHHDLIQA-EEK-LGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKS 325 (376)
Q Consensus 248 ~~~~~L~~~-~g~-L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~ 325 (376)
.-..+.-. +|. +.+.... ...+.||-+.... ....... ...+. .....+++..+|..|+..
T Consensus 252 -~v~~v~~~p~~~~~~~s~s~----d~~v~iwd~~~~~--~~~~~~~----~~~h~---~~v~~~~~spdg~~l~s~--- 314 (435)
T 4e54_B 252 -KVTHVALNPCCDWFLATASV----DQTVKIWDLRQVR--GKASFLY----SLPHR---HPVNAACFSPDGARLLTT--- 314 (435)
T ss_dssp -CEEEEEECTTCSSEEEEEET----TSBCCEEETTTCC--SSSCCSB----CCBCS---SCEEECCBCTTSSEEEEE---
T ss_pred -eEEeeeecCCCceEEEEecC----cceeeEEeccccc--ccceEEE----eeecc---ccccceeECCCCCeeEEE---
Confidence 11122211 333 4444433 5778899776431 1111100 01111 011334555677776655
Q ss_pred CCCcEEEEEeCCCCcE
Q 046476 326 SLVSRVFIYDLKTQER 341 (376)
Q Consensus 326 ~~~~~v~~ydl~t~~~ 341 (376)
+.++.|.+||+++...
T Consensus 315 ~~D~~i~iwd~~~~~~ 330 (435)
T 4e54_B 315 DQKSEIRVYSASQWDC 330 (435)
T ss_dssp ESSSCEEEEESSSSSS
T ss_pred cCCCEEEEEECCCCcc
Confidence 2678899999987654
No 36
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=90.64 E-value=2.5 Score=38.12 Aligned_cols=203 Identities=13% Similarity=-0.026 Sum_probs=88.0
Q ss_pred cceEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCccc
Q 046476 91 NGFICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSYA 170 (376)
Q Consensus 91 nGLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~ 170 (376)
+|-+++....+..+.|||..++++..+-...... .....+.+.|.. .+ ++....
T Consensus 22 ~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~--------------~~v~~~~~s~~~-~~-l~s~s~---------- 75 (377)
T 3dwl_C 22 QRTEFVTTTATNQVELYEQDGNGWKHARTFSDHD--------------KIVTCVDWAPKS-NR-IVTCSQ---------- 75 (377)
T ss_dssp SSSEEECCCSSSCBCEEEEETTEEEECCCBCCCS--------------SCEEEEEECTTT-CC-EEEEET----------
T ss_pred CCCEEEEecCCCEEEEEEccCCceEEEEEEecCC--------------ceEEEEEEeCCC-CE-EEEEeC----------
Confidence 4444443335667889999887544333322111 134455566643 22 222211
Q ss_pred ceecCCCCCeEEEEEcCCCC-eeecCCCCCccee-cCCceEE--CceEEEEEeCCCCCCCEEEEEEcCCce----eEEEe
Q 046476 171 WMIDNHGTPECEIFTLGTTS-WRKIDAPPSRIHF-RRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKEEK----FDIVK 242 (376)
Q Consensus 171 ~~~~~~~~~~~~vys~~t~~-Wr~~~~~~~~~~~-~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~----~~~i~ 242 (376)
...+.+|+..++. |........ +. .-..+.+ +|.....+. .++.|..||+++.+ ...+.
T Consensus 76 -------d~~v~vwd~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~----~d~~i~iwd~~~~~~~~~~~~~~ 142 (377)
T 3dwl_C 76 -------DRNAYVYEKRPDGTWKQTLVLLR--LNRAATFVRWSPNEDKFAVGS----GARVISVCYFEQENDWWVSKHLK 142 (377)
T ss_dssp -------TSSEEEC------CCCCEEECCC--CSSCEEEEECCTTSSCCEEEE----SSSCEEECCC-----CCCCEEEC
T ss_pred -------CCeEEEEEcCCCCceeeeeEecc--cCCceEEEEECCCCCEEEEEe----cCCeEEEEEECCcccceeeeEee
Confidence 3457778777765 443322110 00 0011111 344333333 15678889988765 34444
Q ss_pred CCCcccCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCC---CCCCceeEEE---EEeecccccccCcEeEEEccC
Q 046476 243 LPDEVRKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGR---GGGEVWIRRD---YVFRFDTIMFRPPIPVSNSNN 315 (376)
Q Consensus 243 ~P~~~~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~---g~~~~W~~~~---~ii~~~~~~~~~~~~v~~~~~ 315 (376)
.|.. ..-..+.-. +|.+.+.... ...+.||-++..+- .....|.... ..+..... -.....+++.++
T Consensus 143 ~~h~-~~v~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~sp~ 216 (377)
T 3dwl_C 143 RPLR-STILSLDWHPNNVLLAAGCA----DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPS-GGWVHAVGFSPS 216 (377)
T ss_dssp SSCC-SCEEEEEECTTSSEEEEEES----SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCC-SSSEEEEEECTT
T ss_pred cccC-CCeEEEEEcCCCCEEEEEeC----CCEEEEEEEEecccCCCccccccccccchhhhhhcccC-CceEEEEEECCC
Confidence 3221 112222222 5655455444 67899999853210 0112232211 10110110 012244567777
Q ss_pred CcEEEEecccCCCcEEEEEeCCCCcE
Q 046476 316 GEILLTEYKSSLVSRVFIYDLKTQER 341 (376)
Q Consensus 316 g~il~~~~~~~~~~~v~~ydl~t~~~ 341 (376)
+..++.. +.++.+.+||+++++.
T Consensus 217 ~~~l~~~---~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 217 GNALAYA---GHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp SSCEEEE---ETTTEEC-CEECSTTS
T ss_pred CCEEEEE---eCCCcEEEEECCCCCC
Confidence 7755544 1678899999987754
No 37
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=90.08 E-value=10 Score=34.08 Aligned_cols=191 Identities=12% Similarity=0.106 Sum_probs=98.8
Q ss_pred ceEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcccc
Q 046476 92 GFICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSYAW 171 (376)
Q Consensus 92 GLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~ 171 (376)
..+.+.......+.++|+.+++....-.... ...++.+.+.. .+-++. . .
T Consensus 86 ~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~-----------------~~~~~~~s~dg-~~l~~~-~-~---------- 135 (391)
T 1l0q_A 86 KQVYVTNMASSTLSVIDTTSNTVAGTVKTGK-----------------SPLGLALSPDG-KKLYVT-N-N---------- 135 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEECSS-----------------SEEEEEECTTS-SEEEEE-E-T----------
T ss_pred CEEEEEECCCCEEEEEECCCCeEEEEEeCCC-----------------CcceEEECCCC-CEEEEE-e-C----------
Confidence 3444444355789999999987754322111 22445555543 222122 1 1
Q ss_pred eecCCCCCeEEEEEcCCCCeeecCCCCCcceecCCceEE--CceEEEEEeCCCCCCCEEEEEEcCCceeEEE-eCCCccc
Q 046476 172 MIDNHGTPECEIFTLGTTSWRKIDAPPSRIHFRRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKEEKFDIV-KLPDEVR 248 (376)
Q Consensus 172 ~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i-~~P~~~~ 248 (376)
....+.+|+..++......... .....+.+ +|...+++. .. .+.|..+|+.+.+.... .....
T Consensus 136 -----~~~~v~~~d~~~~~~~~~~~~~----~~~~~~~~~~dg~~l~~~~--~~-~~~v~~~d~~~~~~~~~~~~~~~-- 201 (391)
T 1l0q_A 136 -----GDKTVSVINTVTKAVINTVSVG----RSPKGIAVTPDGTKVYVAN--FD-SMSISVIDTVTNSVIDTVKVEAA-- 201 (391)
T ss_dssp -----TTTEEEEEETTTTEEEEEEECC----SSEEEEEECTTSSEEEEEE--TT-TTEEEEEETTTTEEEEEEECSSE--
T ss_pred -----CCCEEEEEECCCCcEEEEEecC----CCcceEEECCCCCEEEEEe--CC-CCEEEEEECCCCeEEEEEecCCC--
Confidence 1357888888876543322111 00112222 454444443 11 67899999998765433 33221
Q ss_pred CcceeEe-cCCe-EEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccC
Q 046476 249 KHHDLIQ-AEEK-LGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSS 326 (376)
Q Consensus 249 ~~~~L~~-~~g~-L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~ 326 (376)
...+.. -+|+ |++.... .....+.+|-++.. ..+.. ++... ....+++..+|+.++... .
T Consensus 202 -~~~~~~~~~g~~l~~~~~~--~~~~~v~~~d~~~~--------~~~~~-~~~~~----~~~~~~~s~dg~~l~~s~--~ 263 (391)
T 1l0q_A 202 -PSGIAVNPEGTKAYVTNVD--KYFNTVSMIDTGTN--------KITAR-IPVGP----DPAGIAVTPDGKKVYVAL--S 263 (391)
T ss_dssp -EEEEEECTTSSEEEEEEEC--SSCCEEEEEETTTT--------EEEEE-EECCS----SEEEEEECTTSSEEEEEE--T
T ss_pred -ccceEECCCCCEEEEEecC--cCCCcEEEEECCCC--------eEEEE-EecCC----CccEEEEccCCCEEEEEc--C
Confidence 112222 2454 4444431 12678888866532 22333 33321 113457777887554331 2
Q ss_pred CCcEEEEEeCCCCcEEEE
Q 046476 327 LVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 327 ~~~~v~~ydl~t~~~~~v 344 (376)
.++.+.+||+++++....
T Consensus 264 ~d~~v~v~d~~~~~~~~~ 281 (391)
T 1l0q_A 264 FXNTVSVIDTATNTITAT 281 (391)
T ss_dssp TTTEEEEEETTTTEEEEE
T ss_pred CCCEEEEEECCCCcEEEE
Confidence 578999999999877654
No 38
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=89.40 E-value=10 Score=33.06 Aligned_cols=203 Identities=12% Similarity=0.058 Sum_probs=102.2
Q ss_pred cccceEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCc
Q 046476 89 LINGFICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSS 168 (376)
Q Consensus 89 s~nGLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~ 168 (376)
..+|-+.+.......++.++|.|++...+..+. ...++.+++..+ + ++. .
T Consensus 22 ~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~------------------~~~~i~~~~dG~-l-~v~--~-------- 71 (297)
T 3g4e_A 22 EVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDA------------------PVSSVALRQSGG-Y-VAT--I-------- 71 (297)
T ss_dssp TTTTEEEEEETTTTEEEEEETTTCCEEEEECSS------------------CEEEEEEBTTSS-E-EEE--E--------
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcEEEEeCCC------------------ceEEEEECCCCC-E-EEE--E--------
Confidence 335556555546678999999998775443211 234555666543 2 222 1
Q ss_pred ccceecCCCCCeEEEEEcCCCCeeecCCCCCcc-eecCCceEE--CceEEEEEeCCC-------CCCCEEEEEEcCCcee
Q 046476 169 YAWMIDNHGTPECEIFTLGTTSWRKIDAPPSRI-HFRRQGLCA--NGFIHWIITNPR-------KTKPVLAVFDVKEEKF 238 (376)
Q Consensus 169 ~~~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~-~~~~~~v~~--~G~lywl~~~~~-------~~~~~il~fDl~~e~~ 238 (376)
...+.+|+..++.++.+....... ......+.+ +|.+|+-..... .....|..+|.... .
T Consensus 72 ---------~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~ 141 (297)
T 3g4e_A 72 ---------GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-V 141 (297)
T ss_dssp ---------TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-E
T ss_pred ---------CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-E
Confidence 246778888888776654321110 111222333 688665443110 11457888887643 2
Q ss_pred EEEeCCCcccCcceeEec-CCe-EEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEE--eecccccccCcEeEEEcc
Q 046476 239 DIVKLPDEVRKHHDLIQA-EEK-LGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYV--FRFDTIMFRPPIPVSNSN 314 (376)
Q Consensus 239 ~~i~~P~~~~~~~~L~~~-~g~-L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~i--i~~~~~~~~~~~~v~~~~ 314 (376)
..+.- .......+... +|+ |+++... ...+.+|-++.. .........+ ++... ....-+++..
T Consensus 142 ~~~~~--~~~~pngi~~spdg~~lyv~~~~----~~~i~~~~~d~~----~G~~~~~~~~~~~~~~~---~~p~g~~~d~ 208 (297)
T 3g4e_A 142 KKYFD--QVDISNGLDWSLDHKIFYYIDSL----SYSVDAFDYDLQ----TGQISNRRSVYKLEKEE---QIPDGMCIDA 208 (297)
T ss_dssp EEEEE--EESBEEEEEECTTSCEEEEEEGG----GTEEEEEEECTT----TCCEEEEEEEEECCGGG---CEEEEEEEBT
T ss_pred EEEee--ccccccceEEcCCCCEEEEecCC----CCcEEEEeccCC----CCcccCcEEEEECCCCC---CCCCeeEECC
Confidence 22210 00011123333 554 6666654 455655555411 1223222221 22111 1112356677
Q ss_pred CCcEEEEecccCCCcEEEEEeCCCCc-EEEEEEC
Q 046476 315 NGEILLTEYKSSLVSRVFIYDLKTQE-RRAIKIP 347 (376)
Q Consensus 315 ~g~il~~~~~~~~~~~v~~ydl~t~~-~~~v~~~ 347 (376)
+|.+++... ....|..||+++++ ...+...
T Consensus 209 ~G~lwva~~---~~~~v~~~d~~tG~~~~~i~~p 239 (297)
T 3g4e_A 209 EGKLWVACY---NGGRVIRLDPVTGKRLQTVKLP 239 (297)
T ss_dssp TSCEEEEEE---TTTEEEEECTTTCCEEEEEECS
T ss_pred CCCEEEEEc---CCCEEEEEcCCCceEEEEEECC
Confidence 888888763 46789999999655 4555543
No 39
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=88.65 E-value=13 Score=33.41 Aligned_cols=114 Identities=11% Similarity=0.117 Sum_probs=67.1
Q ss_pred cCCceEECceEEEEEeCCCCCCCEEEEEEcCCceeEE-EeCCCc--------ccCcceeEecCCeEEEEEecCCCCCCeE
Q 046476 204 RRQGLCANGFIHWIITNPRKTKPVLAVFDVKEEKFDI-VKLPDE--------VRKHHDLIQAEEKLGVLDCDDFRSKNKI 274 (376)
Q Consensus 204 ~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~-i~~P~~--------~~~~~~L~~~~g~L~~~~~~~~~~~~~~ 274 (376)
...++..+|.+|.... .+.|.+||.++.+... .+++.. ..........+|.|++...+ .
T Consensus 46 ~~~p~v~~~~v~~~~~-----~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~-----g-- 113 (376)
T 3q7m_A 46 NLHPALADNVVYAADR-----AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK-----A-- 113 (376)
T ss_dssp CCCCEEETTEEEEECT-----TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT-----S--
T ss_pred eeccEEECCEEEEEcC-----CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC-----C--
Confidence 3578889999998765 6789999997654332 233321 01123345567888776543 2
Q ss_pred EEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEEEE
Q 046476 275 RVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 275 ~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~~v 344 (376)
.|..++-.. .+..|... ++.... ..|+. .++.+++.. .+..++.+|+++++..+-
T Consensus 114 ~l~a~d~~t--G~~~W~~~---~~~~~~----~~p~~--~~~~v~v~~----~~g~l~~~d~~tG~~~W~ 168 (376)
T 3q7m_A 114 QVYALNTSD--GTVAWQTK---VAGEAL----SRPVV--SDGLVLIHT----SNGQLQALNEADGAVKWT 168 (376)
T ss_dssp EEEEEETTT--CCEEEEEE---CSSCCC----SCCEE--ETTEEEEEC----TTSEEEEEETTTCCEEEE
T ss_pred EEEEEECCC--CCEEEEEe---CCCceE----cCCEE--ECCEEEEEc----CCCeEEEEECCCCcEEEE
Confidence 355555321 25667553 232111 12332 256677666 678899999998876544
No 40
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=88.26 E-value=23 Score=35.73 Aligned_cols=142 Identities=7% Similarity=0.014 Sum_probs=75.1
Q ss_pred CeEEEEEcCCCCeeecCCCCC-ccee-cCCceEE--CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcc--cCcce
Q 046476 179 PECEIFTLGTTSWRKIDAPPS-RIHF-RRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEV--RKHHD 252 (376)
Q Consensus 179 ~~~~vys~~t~~Wr~~~~~~~-~~~~-~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~--~~~~~ 252 (376)
..+..|+..++.|+....... .... .-.++.. +|.+ |++.. ...+..||.+++++..+..+... .....
T Consensus 469 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l-Wigt~----~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~ 543 (781)
T 3v9f_A 469 AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRF-WIGTF----GGGVGIYTPDMQLVRKFNQYEGFCSNTINQ 543 (781)
T ss_dssp TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCE-EEEES----SSCEEEECTTCCEEEEECTTTTCSCSCEEE
T ss_pred CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCE-EEEEc----CCCEEEEeCCCCeEEEccCCCCCCCCeeEE
Confidence 456778888887766543210 0000 1112333 3554 66651 35689999999999888654322 11223
Q ss_pred eEe-cCCeEEEEEecCCCCCCeEEE-EEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcE
Q 046476 253 LIQ-AEEKLGVLDCDDFRSKNKIRV-WILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSR 330 (376)
Q Consensus 253 L~~-~~g~L~~~~~~~~~~~~~~~I-W~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~ 330 (376)
+.+ .+|.|.+.... -+ ..++.. ...+.. +. . ...+.-.....+....+|.|++.. ...
T Consensus 544 i~~d~~g~lWi~T~~--------Glv~~~d~~----~~~~~~-~~-~-~~gl~~~~i~~i~~d~~g~lW~~t-----~~G 603 (781)
T 3v9f_A 544 IYRSSKGQMWLATGE--------GLVCFPSAR----NFDYQV-FQ-R-KEGLPNTHIRAISEDKNGNIWAST-----NTG 603 (781)
T ss_dssp EEECTTSCEEEEETT--------EEEEESCTT----TCCCEE-EC-G-GGTCSCCCCCEEEECSSSCEEEEC-----SSC
T ss_pred EEECCCCCEEEEECC--------CceEEECCC----CCcEEE-cc-c-cCCCCCceEEEEEECCCCCEEEEc-----CCc
Confidence 333 36777666532 12 444332 223322 11 1 111100112334555678888876 556
Q ss_pred EEEEeCCCCcEEEEE
Q 046476 331 VFIYDLKTQERRAIK 345 (376)
Q Consensus 331 v~~ydl~t~~~~~v~ 345 (376)
+..||+++++++...
T Consensus 604 l~~~~~~~~~~~~~~ 618 (781)
T 3v9f_A 604 ISCYITSKKCFYTYD 618 (781)
T ss_dssp EEEEETTTTEEEEEC
T ss_pred eEEEECCCCceEEec
Confidence 999999999887653
No 41
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=87.82 E-value=14 Score=32.76 Aligned_cols=143 Identities=8% Similarity=-0.026 Sum_probs=80.3
Q ss_pred CCeEEEEEcCCCCe-eecCCCCCcceecCCceEECceEEEEEeCCCCCCCEEEEEEcCCceeE-EEeCCCcc---cCcce
Q 046476 178 TPECEIFTLGTTSW-RKIDAPPSRIHFRRQGLCANGFIHWIITNPRKTKPVLAVFDVKEEKFD-IVKLPDEV---RKHHD 252 (376)
Q Consensus 178 ~~~~~vys~~t~~W-r~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~-~i~~P~~~---~~~~~ 252 (376)
...+.+++..|++- ++++... .. ..-.+.-+|.+|.... ....|..+|+.+.+.. .++.+... .....
T Consensus 63 ~~~v~viD~~t~~~~~~i~~~~-~p--~~i~~~~~g~lyv~~~----~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~ 135 (328)
T 3dsm_A 63 SHVIFAIDINTFKEVGRITGFT-SP--RYIHFLSDEKAYVTQI----WDYRIFIINPKTYEITGYIECPDMDMESGSTEQ 135 (328)
T ss_dssp GTEEEEEETTTCCEEEEEECCS-SE--EEEEEEETTEEEEEEB----SCSEEEEEETTTTEEEEEEECTTCCTTTCBCCC
T ss_pred CCEEEEEECcccEEEEEcCCCC-CC--cEEEEeCCCeEEEEEC----CCCeEEEEECCCCeEEEEEEcCCccccCCCcce
Confidence 35788899888765 3342111 00 1111225788888773 1678999999998765 56665411 11223
Q ss_pred eEecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCC-----
Q 046476 253 LIQAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSL----- 327 (376)
Q Consensus 253 L~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~----- 327 (376)
+...+|+|++.... ....+.++-++. ....+... .+..+ .-+.+..+|++++.......
T Consensus 136 i~~~~~~lyv~~~~---~~~~v~viD~~t------~~~~~~i~-~g~~p------~~i~~~~dG~l~v~~~~~~~~~~~~ 199 (328)
T 3dsm_A 136 MVQYGKYVYVNCWS---YQNRILKIDTET------DKVVDELT-IGIQP------TSLVMDKYNKMWTITDGGYEGSPYG 199 (328)
T ss_dssp EEEETTEEEEEECT---TCCEEEEEETTT------TEEEEEEE-CSSCB------CCCEECTTSEEEEEBCCBCTTCSSC
T ss_pred EEEECCEEEEEcCC---CCCEEEEEECCC------CeEEEEEE-cCCCc------cceEEcCCCCEEEEECCCccCCccc
Confidence 44468888887641 134454443322 22333222 22111 23456678888887632100
Q ss_pred --CcEEEEEeCCCCcEEE
Q 046476 328 --VSRVFIYDLKTQERRA 343 (376)
Q Consensus 328 --~~~v~~ydl~t~~~~~ 343 (376)
...|+.+|+++.++..
T Consensus 200 ~~~~~v~~id~~t~~v~~ 217 (328)
T 3dsm_A 200 YEAPSLYRIDAETFTVEK 217 (328)
T ss_dssp BCCCEEEEEETTTTEEEE
T ss_pred cCCceEEEEECCCCeEEE
Confidence 2689999999988763
No 42
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=87.31 E-value=14 Score=32.22 Aligned_cols=108 Identities=16% Similarity=0.107 Sum_probs=58.8
Q ss_pred CCEEEEEEcCC-ce--eEEEeCCCcccCcceeEec--CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeec
Q 046476 225 KPVLAVFDVKE-EK--FDIVKLPDEVRKHHDLIQA--EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRF 299 (376)
Q Consensus 225 ~~~il~fDl~~-e~--~~~i~~P~~~~~~~~L~~~--~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~ 299 (376)
++.|..||+.+ .. ......+... ....+... +|.+.++... ...+.||.++..+ .+........ +..
T Consensus 169 d~~i~i~d~~~~~~~~~~~~~~~~~~-~i~~i~~~~~~~~~l~~~~~----dg~i~i~~~~~~~--~~~~~~~~~~-~~~ 240 (342)
T 1yfq_A 169 NSQVQWFRLPLCEDDNGTIEESGLKY-QIRDVALLPKEQEGYACSSI----DGRVAVEFFDDQG--DDYNSSKRFA-FRC 240 (342)
T ss_dssp TTEEEEEESSCCTTCCCEEEECSCSS-CEEEEEECSGGGCEEEEEET----TSEEEEEECCTTC--CSTTCTTCEE-EEC
T ss_pred CCeEEEEECCccccccceeeecCCCC-ceeEEEECCCCCCEEEEEec----CCcEEEEEEcCCC--ccccccccee-eec
Confidence 67899999987 32 3333333221 12223322 4666555554 7789999987542 1111222233 222
Q ss_pred ccc------cccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEEE
Q 046476 300 DTI------MFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERRA 343 (376)
Q Consensus 300 ~~~------~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~~ 343 (376)
+.. .......+++..++..++... .++.|.+||+++++...
T Consensus 241 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~dg~i~vwd~~~~~~~~ 287 (342)
T 1yfq_A 241 HRLNLKDTNLAYPVNSIEFSPRHKFLYTAG---SDGIISCWNLQTRKKIK 287 (342)
T ss_dssp CCCCTTCCSSCCCEEEEEECTTTCCEEEEE---TTSCEEEEETTTTEEEE
T ss_pred ccccccccccceeEEEEEEcCCCCEEEEec---CCceEEEEcCccHhHhh
Confidence 110 001224456777777665542 67899999999887543
No 43
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=87.26 E-value=15 Score=32.44 Aligned_cols=146 Identities=11% Similarity=0.078 Sum_probs=72.4
Q ss_pred CeEEEEEcCCCCeeecCCCCCccee-cCCce--EECce-EEEEEeCCCCCCCEEEEEEcC-CceeEEE---eCCCcc---
Q 046476 179 PECEIFTLGTTSWRKIDAPPSRIHF-RRQGL--CANGF-IHWIITNPRKTKPVLAVFDVK-EEKFDIV---KLPDEV--- 247 (376)
Q Consensus 179 ~~~~vys~~t~~Wr~~~~~~~~~~~-~~~~v--~~~G~-lywl~~~~~~~~~~il~fDl~-~e~~~~i---~~P~~~--- 247 (376)
..+.+|+..++.++.+..... .. ....+ .-+|. +|.... . .+.|..||+. +.+...+ ......
T Consensus 63 ~~v~~~~~~~g~~~~~~~~~~--~~~~p~~~a~spdg~~l~~~~~---~-~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~ 136 (347)
T 3hfq_A 63 GGIAAWQIDGQTAHKLNTVVA--PGTPPAYVAVDEARQLVYSANY---H-KGTAEVMKIAADGALTLTDTVQHSGHGPRP 136 (347)
T ss_dssp EEEEEEEEETTEEEEEEEEEE--ESCCCSEEEEETTTTEEEEEET---T-TTEEEEEEECTTSCEEEEEEEECCCCCSST
T ss_pred ceEEEEEecCCcEEEeeeeec--CCCCCEEEEECCCCCEEEEEeC---C-CCEEEEEEeCCCCCeeecceeecCCCCCCc
Confidence 567788887777665543110 11 11222 23565 444432 1 5788999985 3333332 221100
Q ss_pred ---cC-cceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEe
Q 046476 248 ---RK-HHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTE 322 (376)
Q Consensus 248 ---~~-~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~ 322 (376)
.. ...+... +|+|++.... ...+.+|.++.. ........ +....- ....-+++..+|+.++..
T Consensus 137 ~~~~~~~~~~~~spdg~l~v~~~~----~~~v~~~~~~~~-----g~~~~~~~-~~~~~g--~~p~~~~~spdg~~l~v~ 204 (347)
T 3hfq_A 137 EQDGSHIHYTDLTPDNRLAVIDLG----SDKVYVYNVSDA-----GQLSEQSV-LTMEAG--FGPRHLVFSPDGQYAFLA 204 (347)
T ss_dssp TCSSCCEEEEEECTTSCEEEEETT----TTEEEEEEECTT-----SCEEEEEE-EECCTT--CCEEEEEECTTSSEEEEE
T ss_pred cccCCCceEEEECCCCcEEEEeCC----CCEEEEEEECCC-----CcEEEeee-EEcCCC--CCCceEEECCCCCEEEEE
Confidence 01 1123333 7785554433 678999998843 23343333 221111 011346778888855443
Q ss_pred cccCCCcEEEEEeCC--CCcEEEE
Q 046476 323 YKSSLVSRVFIYDLK--TQERRAI 344 (376)
Q Consensus 323 ~~~~~~~~v~~ydl~--t~~~~~v 344 (376)
. .....+.+||++ +++++.+
T Consensus 205 ~--~~~~~v~v~~~~~~~g~~~~~ 226 (347)
T 3hfq_A 205 G--ELSSQIASLKYDTQTGAFTQL 226 (347)
T ss_dssp E--TTTTEEEEEEEETTTTEEEEE
T ss_pred e--CCCCEEEEEEecCCCCceEEe
Confidence 1 145667777665 4665543
No 44
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=86.93 E-value=18 Score=32.98 Aligned_cols=197 Identities=15% Similarity=0.144 Sum_probs=101.5
Q ss_pred cccceEEEEEecCcEEEEEecCCcceec-CCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCC
Q 046476 89 LINGFICFYNIVGFEILMRNVVTQEIID-LPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSS 167 (376)
Q Consensus 89 s~nGLl~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~ 167 (376)
+.+|-+++.......+.+|++.+++... ++... ....++.+++..+ + ++....
T Consensus 178 ~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~-~-l~~~~~------- 231 (433)
T 3bws_A 178 PEHNELWVSQMQANAVHVFDLKTLAYKATVDLTG-----------------KWSKILLYDPIRD-L-VYCSNW------- 231 (433)
T ss_dssp GGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSS-----------------SSEEEEEEETTTT-E-EEEEET-------
T ss_pred cCCCEEEEEECCCCEEEEEECCCceEEEEEcCCC-----------------CCeeEEEEcCCCC-E-EEEEec-------
Confidence 4566666665466789999998876543 33111 1334455565433 2 222211
Q ss_pred cccceecCCCCCeEEEEEcCCCCeeecCCCCCcceecCCceEE--CceEEEEEeCCCC----CCCEEEEEEcCCceeEEE
Q 046476 168 SYAWMIDNHGTPECEIFTLGTTSWRKIDAPPSRIHFRRQGLCA--NGFIHWIITNPRK----TKPVLAVFDVKEEKFDIV 241 (376)
Q Consensus 168 ~~~~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~----~~~~il~fDl~~e~~~~i 241 (376)
....+.+|+.+++.......... ...++.+ +|...+.+....+ .++.|..||+.+.+....
T Consensus 232 ---------~~~~i~~~d~~~~~~~~~~~~~~----~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~ 298 (433)
T 3bws_A 232 ---------ISEDISVIDRKTKLEIRKTDKIG----LPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDT 298 (433)
T ss_dssp ---------TTTEEEEEETTTTEEEEECCCCS----EEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEE
T ss_pred ---------CCCcEEEEECCCCcEEEEecCCC----CceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEee
Confidence 13578888888765433221111 1112222 5644444431111 156899999988765433
Q ss_pred -eCCCcccCcceeEe-cCC-eEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcE
Q 046476 242 -KLPDEVRKHHDLIQ-AEE-KLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEI 318 (376)
Q Consensus 242 -~~P~~~~~~~~L~~-~~g-~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~i 318 (376)
..+.. ...+.. -+| .|++.... ...+.+|-++.. ..... ++... ....+++.++|..
T Consensus 299 ~~~~~~---~~~~~~~~~g~~l~~~~~~----~~~v~v~d~~~~--------~~~~~-~~~~~----~~~~~~~s~dg~~ 358 (433)
T 3bws_A 299 IGPPGN---KRHIVSGNTENKIYVSDMC----CSKIEVYDLKEK--------KVQKS-IPVFD----KPNTIALSPDGKY 358 (433)
T ss_dssp EEEEEC---EEEEEECSSTTEEEEEETT----TTEEEEEETTTT--------EEEEE-EECSS----SEEEEEECTTSSE
T ss_pred ccCCCC---cceEEECCCCCEEEEEecC----CCEEEEEECCCC--------cEEEE-ecCCC----CCCeEEEcCCCCE
Confidence 22211 112222 245 45555444 678899976632 22333 33211 1245677778876
Q ss_pred EEEecccCC------------CcEEEEEeCCCCcEEEE
Q 046476 319 LLTEYKSSL------------VSRVFIYDLKTQERRAI 344 (376)
Q Consensus 319 l~~~~~~~~------------~~~v~~ydl~t~~~~~v 344 (376)
++....... ++.+.+||+++.+....
T Consensus 359 l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 359 LYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp EEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred EEEEecCCCccccccccccccceEEEEEECCCCcEEEE
Confidence 555421111 35899999998876543
No 45
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=86.83 E-value=17 Score=32.66 Aligned_cols=142 Identities=9% Similarity=0.045 Sum_probs=75.7
Q ss_pred CeEEEEEcCCC--CeeecCCCCC------cceecCCceEECceEEEEEeCCCCCCCEEEEEEcCCceeE-EEeCCCcccC
Q 046476 179 PECEIFTLGTT--SWRKIDAPPS------RIHFRRQGLCANGFIHWIITNPRKTKPVLAVFDVKEEKFD-IVKLPDEVRK 249 (376)
Q Consensus 179 ~~~~vys~~t~--~Wr~~~~~~~------~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~-~i~~P~~~~~ 249 (376)
..+..|+..++ .|+....... ........+..+|.+|..+. .+.|.+||.++.+.. ..+++...
T Consensus 63 g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-----~g~l~a~d~~tG~~~W~~~~~~~~-- 135 (376)
T 3q7m_A 63 GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE-----KAQVYALNTSDGTVAWQTKVAGEA-- 135 (376)
T ss_dssp SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET-----TSEEEEEETTTCCEEEEEECSSCC--
T ss_pred CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC-----CCEEEEEECCCCCEEEEEeCCCce--
Confidence 35667777665 4765432210 00112345667888888766 678999999865433 23444322
Q ss_pred cceeEecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCc
Q 046476 250 HHDLIQAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVS 329 (376)
Q Consensus 250 ~~~L~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~ 329 (376)
.......+|.|++.... . .|+.++-.. .+..|..... -+.... .....|+. .++.+++.. .+.
T Consensus 136 ~~~p~~~~~~v~v~~~~-----g--~l~~~d~~t--G~~~W~~~~~-~~~~~~-~~~~~~~~--~~~~v~~g~----~~g 198 (376)
T 3q7m_A 136 LSRPVVSDGLVLIHTSN-----G--QLQALNEAD--GAVKWTVNLD-MPSLSL-RGESAPTT--AFGAAVVGG----DNG 198 (376)
T ss_dssp CSCCEEETTEEEEECTT-----S--EEEEEETTT--CCEEEEEECC-C------CCCCCCEE--ETTEEEECC----TTT
T ss_pred EcCCEEECCEEEEEcCC-----C--eEEEEECCC--CcEEEEEeCC-CCceee-cCCCCcEE--ECCEEEEEc----CCC
Confidence 22234457766655432 2 455555321 2566766432 111111 00113332 256666655 678
Q ss_pred EEEEEeCCCCcEEEE
Q 046476 330 RVFIYDLKTQERRAI 344 (376)
Q Consensus 330 ~v~~ydl~t~~~~~v 344 (376)
.++.+|+++++..+-
T Consensus 199 ~l~~~d~~tG~~~w~ 213 (376)
T 3q7m_A 199 RVSAVLMEQGQMIWQ 213 (376)
T ss_dssp EEEEEETTTCCEEEE
T ss_pred EEEEEECCCCcEEEE
Confidence 999999998877654
No 46
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=86.69 E-value=15 Score=31.69 Aligned_cols=27 Identities=7% Similarity=0.204 Sum_probs=21.3
Q ss_pred cccceEEEEEecCcEEEEEecCCcceecC
Q 046476 89 LINGFICFYNIVGFEILMRNVVTQEIIDL 117 (376)
Q Consensus 89 s~nGLl~~~~~~~~~~~V~NP~T~~~~~L 117 (376)
|.+|+|... .++.+.|||+.|++...+
T Consensus 34 S~~~~lAvg--~D~tV~iWd~~tg~~~~~ 60 (318)
T 4ggc_A 34 SSGNVLAVA--LDNSVYLWSASSGDILQL 60 (318)
T ss_dssp CTTSEEEEE--ETTEEEEEETTTCCEEEE
T ss_pred CCCCEEEEE--eCCEEEEEECCCCCEEEE
Confidence 567877666 577899999999987654
No 47
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=86.56 E-value=17 Score=32.26 Aligned_cols=97 Identities=15% Similarity=0.173 Sum_probs=56.8
Q ss_pred CCEEEEEEcCCceeEE-EeCCCcccCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccc
Q 046476 225 KPVLAVFDVKEEKFDI-VKLPDEVRKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTI 302 (376)
Q Consensus 225 ~~~il~fDl~~e~~~~-i~~P~~~~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~ 302 (376)
++.|..+|+.+.+... +..... .-..+... +|.+.+.... ...+.||-+... ..... +..+..
T Consensus 163 d~~i~~wd~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~sg~~----d~~v~~wd~~~~--------~~~~~-~~~h~~ 227 (340)
T 1got_B 163 DTTCALWDIETGQQTTTFTGHTG--DVMSLSLAPDTRLFVSGAC----DASAKLWDVREG--------MCRQT-FTGHES 227 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCCSS--CEEEEEECTTSSEEEEEET----TSCEEEEETTTC--------SEEEE-ECCCSS
T ss_pred CCcEEEEECCCCcEEEEEcCCCC--ceEEEEECCCCCEEEEEeC----CCcEEEEECCCC--------eeEEE-EcCCcC
Confidence 6789999998876543 222111 11223222 5666555544 678999976542 12233 333221
Q ss_pred cccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEE
Q 046476 303 MFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERR 342 (376)
Q Consensus 303 ~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~ 342 (376)
....+++.+++..++.. +.++.+.+||+++++..
T Consensus 228 ---~v~~v~~~p~~~~l~s~---s~d~~v~iwd~~~~~~~ 261 (340)
T 1got_B 228 ---DINAICFFPNGNAFATG---SDDATCRLFDLRADQEL 261 (340)
T ss_dssp ---CEEEEEECTTSSEEEEE---ETTSCEEEEETTTTEEE
T ss_pred ---CEEEEEEcCCCCEEEEE---cCCCcEEEEECCCCcEE
Confidence 22456777788777655 26788999999876543
No 48
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=86.14 E-value=19 Score=32.34 Aligned_cols=192 Identities=10% Similarity=0.081 Sum_probs=96.9
Q ss_pred cccc-eEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCC
Q 046476 89 LING-FICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSS 167 (376)
Q Consensus 89 s~nG-Ll~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~ 167 (376)
+.+| .+.+.......+.++|+.|++....-.... ...++.++|.. .+-++. ..
T Consensus 40 s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-----------------~v~~~~~spdg-~~l~~~-~~------- 93 (391)
T 1l0q_A 40 SPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-----------------SPQGVAVSPDG-KQVYVT-NM------- 93 (391)
T ss_dssp CTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-----------------SEEEEEECTTS-SEEEEE-ET-------
T ss_pred CCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-----------------CccceEECCCC-CEEEEE-EC-------
Confidence 3444 444444456789999999987754322111 22344455533 222222 11
Q ss_pred cccceecCCCCCeEEEEEcCCCCeeecCCCCCcceecCCceEE--CceEEEEEeCCCCCCCEEEEEEcCCceeEEE-eCC
Q 046476 168 SYAWMIDNHGTPECEIFTLGTTSWRKIDAPPSRIHFRRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKEEKFDIV-KLP 244 (376)
Q Consensus 168 ~~~~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i-~~P 244 (376)
....+.+|+..++.-........ ...++.+ +|...+++. .. .+.|..+|+.+.+.... ...
T Consensus 94 ---------~~~~v~v~d~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~~--~~-~~~v~~~d~~~~~~~~~~~~~ 157 (391)
T 1l0q_A 94 ---------ASSTLSVIDTTSNTVAGTVKTGK----SPLGLALSPDGKKLYVTN--NG-DKTVSVINTVTKAVINTVSVG 157 (391)
T ss_dssp ---------TTTEEEEEETTTTEEEEEEECSS----SEEEEEECTTSSEEEEEE--TT-TTEEEEEETTTTEEEEEEECC
T ss_pred ---------CCCEEEEEECCCCeEEEEEeCCC----CcceEEECCCCCEEEEEe--CC-CCEEEEEECCCCcEEEEEecC
Confidence 13568888888765432211110 1112222 455333333 12 67899999988766433 332
Q ss_pred CcccCcceeEe-cCCe-EEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEe
Q 046476 245 DEVRKHHDLIQ-AEEK-LGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTE 322 (376)
Q Consensus 245 ~~~~~~~~L~~-~~g~-L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~ 322 (376)
.. ...+.. -+|+ |++.... ...+.+|-++.. ..... ++.... ...+++..+|..++..
T Consensus 158 ~~---~~~~~~~~dg~~l~~~~~~----~~~v~~~d~~~~--------~~~~~-~~~~~~----~~~~~~~~~g~~l~~~ 217 (391)
T 1l0q_A 158 RS---PKGIAVTPDGTKVYVANFD----SMSISVIDTVTN--------SVIDT-VKVEAA----PSGIAVNPEGTKAYVT 217 (391)
T ss_dssp SS---EEEEEECTTSSEEEEEETT----TTEEEEEETTTT--------EEEEE-EECSSE----EEEEEECTTSSEEEEE
T ss_pred CC---cceEEECCCCCEEEEEeCC----CCEEEEEECCCC--------eEEEE-EecCCC----ccceEECCCCCEEEEE
Confidence 21 122222 2554 4444433 577888865431 22233 332111 1345666777766655
Q ss_pred cccCCCcEEEEEeCCCCcEE
Q 046476 323 YKSSLVSRVFIYDLKTQERR 342 (376)
Q Consensus 323 ~~~~~~~~v~~ydl~t~~~~ 342 (376)
..-..+..+.+||+++++..
T Consensus 218 ~~~~~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 218 NVDKYFNTVSMIDTGTNKIT 237 (391)
T ss_dssp EECSSCCEEEEEETTTTEEE
T ss_pred ecCcCCCcEEEEECCCCeEE
Confidence 21113678999999887654
No 49
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=85.77 E-value=17 Score=31.64 Aligned_cols=195 Identities=11% Similarity=0.067 Sum_probs=101.9
Q ss_pred cccceEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCc
Q 046476 89 LINGFICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSS 168 (376)
Q Consensus 89 s~nGLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~ 168 (376)
...+.+.+.......+.++|+.|++....-..+. . .. ++.++|..+ + ++.... .
T Consensus 7 ~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~-~---------------~~-~~~~s~dg~-~-l~~~~~-~------ 60 (331)
T 3u4y_A 7 TTSNFGIVVEQHLRRISFFSTDTLEILNQITLGY-D---------------FV-DTAITSDCS-N-VVVTSD-F------ 60 (331)
T ss_dssp CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCC-C---------------EE-EEEECSSSC-E-EEEEES-T------
T ss_pred CCCCEEEEEecCCCeEEEEeCcccceeeeEEccC-C---------------cc-eEEEcCCCC-E-EEEEeC-C------
Confidence 3345566665567789999999998754322211 1 23 677777543 2 222221 1
Q ss_pred ccceecCCCCCeEEEEEcCCCCe--eecCCCCCcceecCCceEE--CceEEEEEeCCCCCCCEEEEEEcCCceeE-EEeC
Q 046476 169 YAWMIDNHGTPECEIFTLGTTSW--RKIDAPPSRIHFRRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKEEKFD-IVKL 243 (376)
Q Consensus 169 ~~~~~~~~~~~~~~vys~~t~~W--r~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~-~i~~ 243 (376)
...+.+++..++.- +...... ....++.+ +|..-+... ..+....|..+|+++.+.. .++.
T Consensus 61 ---------~~~i~~~d~~~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~~~~-~~~~~~~i~v~d~~~~~~~~~~~~ 126 (331)
T 3u4y_A 61 ---------CQTLVQIETQLEPPKVVAIQEGQ----SSMADVDITPDDQFAVTVT-GLNHPFNMQSYSFLKNKFISTIPI 126 (331)
T ss_dssp ---------TCEEEEEECSSSSCEEEEEEECS----SCCCCEEECTTSSEEEECC-CSSSSCEEEEEETTTTEEEEEEEC
T ss_pred ---------CCeEEEEECCCCceeEEecccCC----CCccceEECCCCCEEEEec-CCCCcccEEEEECCCCCeEEEEEC
Confidence 34778888877653 1111110 01111222 455333333 1101228999999887653 3343
Q ss_pred CCcccCcceeEec-CCe-EEEEEecCCCCCCe-EEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCc-EE
Q 046476 244 PDEVRKHHDLIQA-EEK-LGVLDCDDFRSKNK-IRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGE-IL 319 (376)
Q Consensus 244 P~~~~~~~~L~~~-~g~-L~~~~~~~~~~~~~-~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~-il 319 (376)
+.. ...+... +|+ |++.... ... +.+|.++..+ .........++... ....+++.++|+ ++
T Consensus 127 ~~~---~~~~~~spdg~~l~~~~~~----~~~~i~~~~~~~~g----~~~~~~~~~~~~~~----~~~~~~~spdg~~l~ 191 (331)
T 3u4y_A 127 PYD---AVGIAISPNGNGLILIDRS----SANTVRRFKIDADG----VLFDTGQEFISGGT----RPFNITFTPDGNFAF 191 (331)
T ss_dssp CTT---EEEEEECTTSSCEEEEEET----TTTEEEEEEECTTC----CEEEEEEEEECSSS----SEEEEEECTTSSEEE
T ss_pred CCC---ccceEECCCCCEEEEEecC----CCceEEEEEECCCC----cEeecCCccccCCC----CccceEECCCCCEEE
Confidence 322 1233333 665 6666554 455 9999998542 11111112122111 114467778887 44
Q ss_pred EEecccCCCcEEEEEeCCCCcE
Q 046476 320 LTEYKSSLVSRVFIYDLKTQER 341 (376)
Q Consensus 320 ~~~~~~~~~~~v~~ydl~t~~~ 341 (376)
+.. ..+..+.+||+++.+.
T Consensus 192 v~~---~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 192 VAN---LIGNSIGILETQNPEN 210 (331)
T ss_dssp EEE---TTTTEEEEEECSSTTS
T ss_pred EEe---CCCCeEEEEECCCCcc
Confidence 444 1467899999998774
No 50
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=85.63 E-value=20 Score=32.17 Aligned_cols=101 Identities=10% Similarity=-0.067 Sum_probs=54.0
Q ss_pred CCEEEEEEcCCceeEE-EeCCCcccCcceeEec--CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeeccc
Q 046476 225 KPVLAVFDVKEEKFDI-VKLPDEVRKHHDLIQA--EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDT 301 (376)
Q Consensus 225 ~~~il~fDl~~e~~~~-i~~P~~~~~~~~L~~~--~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~ 301 (376)
++.|..+|+.+.+... +..+........+.-. ++.+.+.... ...+.||-++.. ..+.. +..+.
T Consensus 191 D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~----dg~v~~wd~~~~--------~~~~~-~~~h~ 257 (344)
T 4gqb_B 191 DNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDE----NGTVSLVDTKST--------SCVLS-SAVHS 257 (344)
T ss_dssp TSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEET----TSEEEEEESCC----------CCEE-EECCS
T ss_pred ccccccccccccceeeeeecceeeccceeeeecCCCCcceEEecc----CCcEEEEECCCC--------cEEEE-EcCCC
Confidence 6778999998765433 2222211111122222 4555555443 678999966532 12233 33222
Q ss_pred ccccCcEeEEEccCC-cEEEEecccCCCcEEEEEeCCCCcEEEE
Q 046476 302 IMFRPPIPVSNSNNG-EILLTEYKSSLVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 302 ~~~~~~~~v~~~~~g-~il~~~~~~~~~~~v~~ydl~t~~~~~v 344 (376)
- ....+++..++ .++... +.++.|.+||.+++++...
T Consensus 258 ~---~v~~v~fsp~g~~~lasg---s~D~~i~vwd~~~~~~~~~ 295 (344)
T 4gqb_B 258 Q---CVTGLVFSPHSVPFLASL---SEDCSLAVLDSSLSELFRS 295 (344)
T ss_dssp S---CEEEEEECSSSSCCEEEE---ETTSCEEEECTTCCEEEEE
T ss_pred C---CEEEEEEccCCCeEEEEE---eCCCeEEEEECCCCcEEEE
Confidence 1 22456777766 455443 2678899999998876543
No 51
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=84.94 E-value=19 Score=31.34 Aligned_cols=109 Identities=13% Similarity=0.125 Sum_probs=59.5
Q ss_pred CCEEEEEEcCC-ceeEE-----EeCCCcccCcceeEe-cCCe-EEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEE
Q 046476 225 KPVLAVFDVKE-EKFDI-----VKLPDEVRKHHDLIQ-AEEK-LGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYV 296 (376)
Q Consensus 225 ~~~il~fDl~~-e~~~~-----i~~P~~~~~~~~L~~-~~g~-L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~i 296 (376)
.+.|..||+.+ .+... +..+... ....+.. -+|+ |+++... ...+.+|.++.. ...+.....
T Consensus 150 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pdg~~l~~~~~~----~~~i~~~~~~~~----~g~~~~~~~- 219 (343)
T 1ri6_A 150 QDRICLFTVSDDGHLVAQDPAEVTTVEGA-GPRHMVFHPNEQYAYCVNEL----NSSVDVWELKDP----HGNIECVQT- 219 (343)
T ss_dssp GTEEEEEEECTTSCEEEEEEEEEECSTTC-CEEEEEECTTSSEEEEEETT----TTEEEEEESSCT----TSCCEEEEE-
T ss_pred CCEEEEEEecCCCceeeecccccccCCCC-CcceEEECCCCCEEEEEeCC----CCEEEEEEecCC----CCcEEEEee-
Confidence 67899999987 65542 3333321 1112322 2565 5555433 678999998743 234444444
Q ss_pred eecccccc---cCcEeEEEccCCcEEEEecccCCCcEEEEEeCC--CCcEEEEE
Q 046476 297 FRFDTIMF---RPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLK--TQERRAIK 345 (376)
Q Consensus 297 i~~~~~~~---~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~--t~~~~~v~ 345 (376)
+...+... .....+++..+|+.++... ..++.+.+||++ +++.+.+.
T Consensus 220 ~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~--~~~~~i~v~d~~~~~~~~~~~~ 271 (343)
T 1ri6_A 220 LDMMPENFSDTRWAADIHITPDGRHLYACD--RTASLITVFSVSEDGSVLSKEG 271 (343)
T ss_dssp EECSCTTCCSCCCEEEEEECTTSSEEEEEE--TTTTEEEEEEECTTSCCEEEEE
T ss_pred ccccCccccccCCccceEECCCCCEEEEEe--cCCCEEEEEEEcCCCCceEEee
Confidence 22211100 1112367778887665431 256789999998 55555543
No 52
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=84.23 E-value=21 Score=31.27 Aligned_cols=210 Identities=13% Similarity=0.071 Sum_probs=104.2
Q ss_pred ccceEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcc
Q 046476 90 INGFICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSY 169 (376)
Q Consensus 90 ~nGLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~ 169 (376)
.+|-+.+.......++++||.+++...+..... ....++.+++.. . ++.......
T Consensus 54 ~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~----------------~~~~~i~~~~dg-~--l~v~~~~~~------ 108 (333)
T 2dg1_A 54 RQGQLFLLDVFEGNIFKINPETKEIKRPFVSHK----------------ANPAAIKIHKDG-R--LFVCYLGDF------ 108 (333)
T ss_dssp TTSCEEEEETTTCEEEEECTTTCCEEEEEECSS----------------SSEEEEEECTTS-C--EEEEECTTS------
T ss_pred CCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCC----------------CCcceEEECCCC-c--EEEEeCCCC------
Confidence 456665544356689999999998776432111 134455666653 2 222221100
Q ss_pred cceecCCCCCeEEEEEcCCCCeeec-CCCCCcceecCCceEE--CceEEEEEeCC--CCCCCEEEEEEcCCceeEEEeCC
Q 046476 170 AWMIDNHGTPECEIFTLGTTSWRKI-DAPPSRIHFRRQGLCA--NGFIHWIITNP--RKTKPVLAVFDVKEEKFDIVKLP 244 (376)
Q Consensus 170 ~~~~~~~~~~~~~vys~~t~~Wr~~-~~~~~~~~~~~~~v~~--~G~lywl~~~~--~~~~~~il~fDl~~e~~~~i~~P 244 (376)
.....+.+|+..++.-+.. ....+. .....+.+ +|.+|...... ......|..+|.++.++..+.-.
T Consensus 109 ------~~~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 180 (333)
T 2dg1_A 109 ------KSTGGIFAATENGDNLQDIIEDLSTA--YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN 180 (333)
T ss_dssp ------SSCCEEEEECTTSCSCEEEECSSSSC--CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE
T ss_pred ------CCCceEEEEeCCCCEEEEEEccCccC--CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC
Confidence 0124677777777654422 111100 01112222 57766544310 00135789999887766654211
Q ss_pred CcccCcceeEe-cCCe-EEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEE-EEe-ecccccccCcEeEEEccCCcEEE
Q 046476 245 DEVRKHHDLIQ-AEEK-LGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRD-YVF-RFDTIMFRPPIPVSNSNNGEILL 320 (376)
Q Consensus 245 ~~~~~~~~L~~-~~g~-L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~-~ii-~~~~~~~~~~~~v~~~~~g~il~ 320 (376)
......+.. -+|+ |++.... ...+.+|-++..+ ....... .++ ..... ....-+++..+|.+++
T Consensus 181 --~~~~~~i~~~~dg~~l~v~~~~----~~~i~~~d~~~~g----~~~~~~~~~~~~~~~~~--~~~~~i~~d~~G~l~v 248 (333)
T 2dg1_A 181 --ISVANGIALSTDEKVLWVTETT----ANRLHRIALEDDG----VTIQPFGATIPYYFTGH--EGPDSCCIDSDDNLYV 248 (333)
T ss_dssp --ESSEEEEEECTTSSEEEEEEGG----GTEEEEEEECTTS----SSEEEEEEEEEEECCSS--SEEEEEEEBTTCCEEE
T ss_pred --CCcccceEECCCCCEEEEEeCC----CCeEEEEEecCCC----cCcccccceEEEecCCC--CCCCceEECCCCCEEE
Confidence 011122333 3554 7666543 4567777665321 1121111 101 11010 1112356677888887
Q ss_pred EecccCCCcEEEEEeCCCCcEEEEEEC
Q 046476 321 TEYKSSLVSRVFIYDLKTQERRAIKIP 347 (376)
Q Consensus 321 ~~~~~~~~~~v~~ydl~t~~~~~v~~~ 347 (376)
... ....|..||++++.++.+...
T Consensus 249 ~~~---~~~~v~~~d~~g~~~~~~~~~ 272 (333)
T 2dg1_A 249 AMY---GQGRVLVFNKRGYPIGQILIP 272 (333)
T ss_dssp EEE---TTTEEEEECTTSCEEEEEECT
T ss_pred EEc---CCCEEEEECCCCCEEEEEEcC
Confidence 762 457899999987777776554
No 53
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=83.99 E-value=26 Score=32.24 Aligned_cols=146 Identities=12% Similarity=0.162 Sum_probs=74.0
Q ss_pred CCeEEEEEcCCCCeeecCCCCCcceecCCceEECce-EEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcccCcceeEe-
Q 046476 178 TPECEIFTLGTTSWRKIDAPPSRIHFRRQGLCANGF-IHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQ- 255 (376)
Q Consensus 178 ~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~- 255 (376)
...+.+++..++..+.+....... ......-||. +.+.+. .+....|..+|+.+.+...+..... ....+.-
T Consensus 202 ~~~i~~~d~~tg~~~~l~~~~~~~--~~~~~spdg~~la~~~~--~~g~~~i~~~d~~~~~~~~l~~~~~--~~~~~~~s 275 (415)
T 2hqs_A 202 RSALVIQTLANGAVRQVASFPRHN--GAPAFSPDGSKLAFALS--KTGSLNLYVMDLASGQIRQVTDGRS--NNTEPTWF 275 (415)
T ss_dssp SCEEEEEETTTCCEEEEECCSSCE--EEEEECTTSSEEEEEEC--TTSSCEEEEEETTTCCEEECCCCSS--CEEEEEEC
T ss_pred CcEEEEEECCCCcEEEeecCCCcc--cCEEEcCCCCEEEEEEe--cCCCceEEEEECCCCCEEeCcCCCC--cccceEEC
Confidence 468889999888766543321100 0111112565 444443 2224569999999877654432211 1112222
Q ss_pred cCCe-EEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEE
Q 046476 256 AEEK-LGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIY 334 (376)
Q Consensus 256 ~~g~-L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~y 334 (376)
-+|+ |++.... .....||.++-.+ .. ... +..... ....+++..+|+.++....-.....++.|
T Consensus 276 pdg~~l~~~s~~----~g~~~i~~~d~~~----~~---~~~-l~~~~~---~~~~~~~spdG~~l~~~~~~~g~~~i~~~ 340 (415)
T 2hqs_A 276 PDSQNLAFTSDQ----AGRPQVYKVNING----GA---PQR-ITWEGS---QNQDADVSSDGKFMVMVSSNGGQQHIAKQ 340 (415)
T ss_dssp TTSSEEEEEECT----TSSCEEEEEETTS----SC---CEE-CCCSSS---EEEEEEECTTSSEEEEEEECSSCEEEEEE
T ss_pred CCCCEEEEEECC----CCCcEEEEEECCC----CC---EEE-EecCCC---cccCeEECCCCCEEEEEECcCCceEEEEE
Confidence 2665 4444432 3345677776432 11 112 221111 11345667788765544211124689999
Q ss_pred eCCCCcEEEE
Q 046476 335 DLKTQERRAI 344 (376)
Q Consensus 335 dl~t~~~~~v 344 (376)
|+++++.+.+
T Consensus 341 d~~~~~~~~l 350 (415)
T 2hqs_A 341 DLATGGVQVL 350 (415)
T ss_dssp ETTTCCEEEC
T ss_pred ECCCCCEEEe
Confidence 9999888654
No 54
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=83.73 E-value=19 Score=30.33 Aligned_cols=204 Identities=8% Similarity=0.034 Sum_probs=93.7
Q ss_pred cccceEEEEEecCcEEEEEecCC-cceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCC
Q 046476 89 LINGFICFYNIVGFEILMRNVVT-QEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSS 167 (376)
Q Consensus 89 s~nGLl~~~~~~~~~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~ 167 (376)
+-+|-.++.. ....++++|..+ ++...+....... ....+.+.|.. .+ ++......
T Consensus 50 spdg~~l~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~---------------~~~~~~~spdg-~~-l~~~~~~~----- 106 (297)
T 2ojh_A 50 SPDGKYLLLN-SEGLLYRLSLAGDPSPEKVDTGFATI---------------CNNDHGISPDG-AL-YAISDKVE----- 106 (297)
T ss_dssp CTTSSEEEEE-ETTEEEEEESSSCCSCEECCCTTCCC---------------BCSCCEECTTS-SE-EEEEECTT-----
T ss_pred CCCCCEEEEE-cCCeEEEEeCCCCCCceEeccccccc---------------cccceEECCCC-CE-EEEEEeCC-----
Confidence 3445443333 466899999999 8777665432211 11122334432 22 22222111
Q ss_pred cccceecCCCCCeEEEEEcCCCCeeecCCCCCcceecCCceEECce-EEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCc
Q 046476 168 SYAWMIDNHGTPECEIFTLGTTSWRKIDAPPSRIHFRRQGLCANGF-IHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDE 246 (376)
Q Consensus 168 ~~~~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~ 246 (376)
.....+.+++..++.-+.+........ ....-+|. +++.+.. +....|..+|+.+.+...+.....
T Consensus 107 --------~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~spdg~~l~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~ 173 (297)
T 2ojh_A 107 --------FGKSAIYLLPSTGGTPRLMTKNLPSYW---HGWSPDGKSFTYCGIR--DQVFDIYSMDIDSGVETRLTHGEG 173 (297)
T ss_dssp --------TSSCEEEEEETTCCCCEECCSSSSEEE---EEECTTSSEEEEEEEE--TTEEEEEEEETTTCCEEECCCSSS
T ss_pred --------CCcceEEEEECCCCceEEeecCCCccc---eEECCCCCEEEEEECC--CCceEEEEEECCCCcceEcccCCC
Confidence 114566666666665444433221100 01111443 3333331 102245556666655544432221
Q ss_pred ccCcceeEe-cCCeE-EEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecc
Q 046476 247 VRKHHDLIQ-AEEKL-GVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYK 324 (376)
Q Consensus 247 ~~~~~~L~~-~~g~L-~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~ 324 (376)
....+.- -+|+. ++.... ...+.||.++..+ ... .. +..... ....+++..+|+.++....
T Consensus 174 --~~~~~~~s~dg~~l~~~~~~----~~~~~i~~~~~~~----~~~---~~-~~~~~~---~~~~~~~s~dg~~l~~~~~ 236 (297)
T 2ojh_A 174 --RNDGPDYSPDGRWIYFNSSR----TGQMQIWRVRVDG----SSV---ER-ITDSAY---GDWFPHPSPSGDKVVFVSY 236 (297)
T ss_dssp --CEEEEEECTTSSEEEEEECT----TSSCEEEEEETTS----SCE---EE-CCCCSE---EEEEEEECTTSSEEEEEEE
T ss_pred --ccccceECCCCCEEEEEecC----CCCccEEEECCCC----CCc---EE-EecCCc---ccCCeEECCCCCEEEEEEc
Confidence 1122222 25654 444332 4578899987432 111 22 222211 1134566677775544311
Q ss_pred -cC-------CCcEEEEEeCCCCcEEEEE
Q 046476 325 -SS-------LVSRVFIYDLKTQERRAIK 345 (376)
Q Consensus 325 -~~-------~~~~v~~ydl~t~~~~~v~ 345 (376)
.. ....++.||+++++.+.+.
T Consensus 237 ~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 237 DADVFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp ETTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred CCCCCcccccCceEEEEEecCCCCceeee
Confidence 00 1257999999998876554
No 55
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=83.66 E-value=25 Score=31.68 Aligned_cols=95 Identities=11% Similarity=0.130 Sum_probs=52.3
Q ss_pred EEEEEEcCCceeEEEeCC-CcccCcceeEec--CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeeccccc
Q 046476 227 VLAVFDVKEEKFDIVKLP-DEVRKHHDLIQA--EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIM 303 (376)
Q Consensus 227 ~il~fDl~~e~~~~i~~P-~~~~~~~~L~~~--~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~ 303 (376)
.|..||+.+..-....+. ........+.-. +|.+.+.... ...+.||-++.. ..+.. +..+.-
T Consensus 241 ~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~----dg~v~~wd~~~~--------~~~~~-~~~~~~- 306 (416)
T 2pm9_A 241 SILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGR----DNTVLLWNPESA--------EQLSQ-FPARGN- 306 (416)
T ss_dssp CCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEES----SSEEEEECSSSC--------CEEEE-EECSSS-
T ss_pred eEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeC----CCCEEEeeCCCC--------cccee-ecCCCC-
Confidence 788999987421111111 111111223222 5665555544 678999966532 23344 343222
Q ss_pred ccCcEeEEEccCC-cEEEEecccCCCcEEEEEeCCCCc
Q 046476 304 FRPPIPVSNSNNG-EILLTEYKSSLVSRVFIYDLKTQE 340 (376)
Q Consensus 304 ~~~~~~v~~~~~g-~il~~~~~~~~~~~v~~ydl~t~~ 340 (376)
....+++.+++ .+++.. +.++.+.+||+++.+
T Consensus 307 --~v~~~~~s~~~~~~l~s~---~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 307 --WCFKTKFAPEAPDLFACA---SFDNKIEVQTLQNLT 339 (416)
T ss_dssp --CCCCEEECTTCTTEEEEC---CSSSEEEEEESCCCC
T ss_pred --ceEEEEECCCCCCEEEEE---ecCCcEEEEEccCCC
Confidence 22456777777 676665 268899999998765
No 56
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=83.17 E-value=24 Score=31.13 Aligned_cols=116 Identities=8% Similarity=0.056 Sum_probs=60.5
Q ss_pred CceEEEEEeCCCCCCCEEEEEEcCCce--eEEE-eCCCcccCcceeEec-C---CeEEEEEecCCCCCCeEEEEEEccCC
Q 046476 211 NGFIHWIITNPRKTKPVLAVFDVKEEK--FDIV-KLPDEVRKHHDLIQA-E---EKLGVLDCDDFRSKNKIRVWILKDYG 283 (376)
Q Consensus 211 ~G~lywl~~~~~~~~~~il~fDl~~e~--~~~i-~~P~~~~~~~~L~~~-~---g~L~~~~~~~~~~~~~~~IW~l~~~~ 283 (376)
+|.....+. .++.|..||+.+.+ +..+ .+......-..+.-. + |.+.+.... ...+.||-++..
T Consensus 171 ~~~~l~~~~----~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~----dg~i~iwd~~~~- 241 (379)
T 3jrp_A 171 ESRKFVTGG----ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ----DRTCIIWTQDNE- 241 (379)
T ss_dssp TTCEEEEEE----TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET----TSCEEEEEESST-
T ss_pred CCCEEEEEe----CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeC----CCEEEEEeCCCC-
Confidence 354444444 16678899986543 3332 222211112223322 3 566555544 678999998764
Q ss_pred CCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCC-CCcEEEE
Q 046476 284 RGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLK-TQERRAI 344 (376)
Q Consensus 284 ~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~-t~~~~~v 344 (376)
...+.... +..... -.....+++..+|..++... .++.+.+||++ .++++.+
T Consensus 242 ---~~~~~~~~--~~~~~~-~~~v~~~~~s~~g~~l~~~~---~dg~i~iw~~~~~~~~~~~ 294 (379)
T 3jrp_A 242 ---QGPWKKTL--LKEEKF-PDVLWRASWSLSGNVLALSG---GDNKVTLWKENLEGKWEPA 294 (379)
T ss_dssp ---TSCCEEEE--SSSSCC-SSCEEEEEECSSSCCEEEEE---SSSSEEEEEEEETTEEEEE
T ss_pred ---Cccceeee--eccccC-CCcEEEEEEcCCCCEEEEec---CCCcEEEEeCCCCCccccc
Confidence 23333321 221111 01224457777887665541 67889999998 3455544
No 57
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=82.78 E-value=22 Score=30.51 Aligned_cols=112 Identities=11% Similarity=0.160 Sum_probs=68.0
Q ss_pred EECceEEEEEeCCCCCCCEEEEEEcCCcee-EEEeCCCcccCcceeEecCCeEEEEEecCCCCCCeEEEEEEccCCCCCC
Q 046476 209 CANGFIHWIITNPRKTKPVLAVFDVKEEKF-DIVKLPDEVRKHHDLIQAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGG 287 (376)
Q Consensus 209 ~~~G~lywl~~~~~~~~~~il~fDl~~e~~-~~i~~P~~~~~~~~L~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~ 287 (376)
+.+|.+|.-+. ......|..+|+++.+- ..+++|... ....+...+++|+++.-. .. .+|+.+-
T Consensus 28 ~~~~~LyestG--~~g~S~v~~vD~~tgkv~~~~~l~~~~-fgeGi~~~~~~ly~ltw~----~~--~v~v~D~------ 92 (243)
T 3mbr_X 28 YLRGHLYESTG--ETGRSSVRKVDLETGRILQRAEVPPPY-FGAGIVAWRDRLIQLTWR----NH--EGFVYDL------ 92 (243)
T ss_dssp EETTEEEEEEC--CTTSCEEEEEETTTCCEEEEEECCTTC-CEEEEEEETTEEEEEESS----SS--EEEEEET------
T ss_pred EECCEEEEECC--CCCCceEEEEECCCCCEEEEEeCCCCc-ceeEEEEeCCEEEEEEee----CC--EEEEEEC------
Confidence 44567666554 11146899999998766 557887753 223456668899888643 33 4555553
Q ss_pred CceeEEEEEeecccccccCcEeEEEccCCc-EEEEecccCCCcEEEEEeCCCCcE-EEEEE
Q 046476 288 EVWIRRDYVFRFDTIMFRPPIPVSNSNNGE-ILLTEYKSSLVSRVFIYDLKTQER-RAIKI 346 (376)
Q Consensus 288 ~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~-il~~~~~~~~~~~v~~ydl~t~~~-~~v~~ 346 (376)
..-.++.+ |+... .++++..++. +++.. ....+.++|++|.+. +.|.+
T Consensus 93 ~tl~~~~t-i~~~~------~Gwglt~dg~~L~vSd----gs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 93 ATLTPRAR-FRYPG------EGWALTSDDSHLYMSD----GTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp TTTEEEEE-EECSS------CCCEEEECSSCEEEEC----SSSEEEEECTTTCCEEEEEEC
T ss_pred CcCcEEEE-EeCCC------CceEEeeCCCEEEEEC----CCCeEEEEeCCCCeEEEEEEE
Confidence 22445555 44321 2345545554 55555 678999999998655 44444
No 58
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=82.20 E-value=23 Score=30.22 Aligned_cols=190 Identities=12% Similarity=0.082 Sum_probs=96.8
Q ss_pred cccceEEEEEec-CcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCC
Q 046476 89 LINGFICFYNIV-GFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSS 167 (376)
Q Consensus 89 s~nGLl~~~~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~ 167 (376)
..+|-+.+.... ...+.++|+..+....+..... ....++.+|+... ++... ..
T Consensus 86 ~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~----------------~~~~~i~~~~~g~---l~v~~-~~----- 140 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATIL----------------QHPRGVTVDNKGR---IIVVE-CK----- 140 (286)
T ss_dssp TTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTC----------------SCEEEEEECTTSC---EEEEE-TT-----
T ss_pred cCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccC----------------CCceEEEEeCCCC---EEEEE-CC-----
Confidence 356666665422 5678888865544444433211 1335566676432 22221 11
Q ss_pred cccceecCCCCCeEEEEEcCCCCeeecCCCCCcceecCCceEE--CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCC
Q 046476 168 SYAWMIDNHGTPECEIFTLGTTSWRKIDAPPSRIHFRRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPD 245 (376)
Q Consensus 168 ~~~~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~ 245 (376)
...+.+|+......+....... .....++.+ +|.+|.... . ...|..||...+....+..+.
T Consensus 141 ----------~~~i~~~~~~g~~~~~~~~~~~--~~~p~~i~~~~~g~l~v~~~---~-~~~i~~~~~~g~~~~~~~~~g 204 (286)
T 1q7f_A 141 ----------VMRVIIFDQNGNVLHKFGCSKH--LEFPNGVVVNDKQEIFISDN---R-AHCVKVFNYEGQYLRQIGGEG 204 (286)
T ss_dssp ----------TTEEEEECTTSCEEEEEECTTT--CSSEEEEEECSSSEEEEEEG---G-GTEEEEEETTCCEEEEESCTT
T ss_pred ----------CCEEEEEcCCCCEEEEeCCCCc--cCCcEEEEECCCCCEEEEEC---C-CCEEEEEcCCCCEEEEEccCC
Confidence 3456666654433333221100 001223444 478666543 1 578999999877666665432
Q ss_pred cccCcceeEe-cCCeEEEEEecCCCCCC-eEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEec
Q 046476 246 EVRKHHDLIQ-AEEKLGVLDCDDFRSKN-KIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEY 323 (376)
Q Consensus 246 ~~~~~~~L~~-~~g~L~~~~~~~~~~~~-~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~ 323 (376)
.......+.. -+|.|+++... .. .+.+|- .. ..-..... .+ ... .....+++..+|.+++..
T Consensus 205 ~~~~p~~i~~d~~G~l~v~~~~----~~~~i~~~~--~~-----g~~~~~~~-~~-~~~--~~~~~i~~~~~g~l~vs~- 268 (286)
T 1q7f_A 205 ITNYPIGVGINSNGEILIADNH----NNFNLTIFT--QD-----GQLISALE-SK-VKH--AQCFDVALMDDGSVVLAS- 268 (286)
T ss_dssp TSCSEEEEEECTTCCEEEEECS----SSCEEEEEC--TT-----SCEEEEEE-ES-SCC--SCEEEEEEETTTEEEEEE-
T ss_pred ccCCCcEEEECCCCCEEEEeCC----CCEEEEEEC--CC-----CCEEEEEc-cc-CCC--CcceeEEECCCCcEEEEC-
Confidence 1112223443 37888877654 33 777773 22 11222222 11 111 111346777789888876
Q ss_pred ccCCCcEEEEEeCCC
Q 046476 324 KSSLVSRVFIYDLKT 338 (376)
Q Consensus 324 ~~~~~~~v~~ydl~t 338 (376)
.++.|.+|+...
T Consensus 269 ---~~~~v~v~~~~~ 280 (286)
T 1q7f_A 269 ---KDYRLYIYRYVQ 280 (286)
T ss_dssp ---TTTEEEEEECSC
T ss_pred ---CCCeEEEEEccc
Confidence 578899998754
No 59
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=82.03 E-value=25 Score=30.66 Aligned_cols=104 Identities=12% Similarity=0.051 Sum_probs=55.2
Q ss_pred CCEEEEEEcCCceeE-EEe---CCCcccCcceeEec-CCe-EEEEEecCCCCCCeEEEEEEccCCC-----------CCC
Q 046476 225 KPVLAVFDVKEEKFD-IVK---LPDEVRKHHDLIQA-EEK-LGVLDCDDFRSKNKIRVWILKDYGR-----------GGG 287 (376)
Q Consensus 225 ~~~il~fDl~~e~~~-~i~---~P~~~~~~~~L~~~-~g~-L~~~~~~~~~~~~~~~IW~l~~~~~-----------g~~ 287 (376)
++.|..||+.+.+.. .+. +......-..+.-. +|. +.+.... ...+.||-++.... +..
T Consensus 233 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~~~~~~~~g~~~~~~ 308 (357)
T 3i2n_A 233 EGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGG----AGGLHLWKYEYPIQRSKKDSEGIEMGVA 308 (357)
T ss_dssp TTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEET----TSEEEEEEEECCSCC--CCTTSCCCCCC
T ss_pred CCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeC----CCcEEEeecCCCcccccccCCCCccccc
Confidence 678888998765321 111 11111112223222 555 4444433 67899999875310 011
Q ss_pred CceeEEEEEeecccccccCcEeEEEccCCcEEE-EecccCCCcEEEEEeCCCC
Q 046476 288 EVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILL-TEYKSSLVSRVFIYDLKTQ 339 (376)
Q Consensus 288 ~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~-~~~~~~~~~~v~~ydl~t~ 339 (376)
..+..... +..+.- ....+++..++..++ .. +.++.+.+||+++.
T Consensus 309 ~~~~~~~~-~~~~~~---~v~~~~~s~~~~~l~~s~---~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 309 GSVSLLQN-VTLSTQ---PISSLDWSPDKRGLCVCS---SFDQTVRVLIVTKL 354 (357)
T ss_dssp CEEEEEEE-EECCSS---CEEEEEECSSSTTEEEEE---ETTSEEEEEEECC-
T ss_pred cccceeec-cccCCC---CeeEEEEcCCCCeEEEEe---cCCCcEEEEECCCc
Confidence 23455555 443321 234567777887665 33 16889999999764
No 60
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=81.87 E-value=23 Score=30.09 Aligned_cols=184 Identities=11% Similarity=0.131 Sum_probs=93.4
Q ss_pred ccceEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcc
Q 046476 90 INGFICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSY 169 (376)
Q Consensus 90 ~nGLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~ 169 (376)
.+|-+.+.......++++||. ++....+.+... ....++.+|+..+ + .+....
T Consensus 113 ~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~---------------~~~~~i~~d~~g~---l-~v~~~~------- 165 (300)
T 2qc5_A 113 LNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKG---------------SYPAFITLGSDNA---L-WFTENQ------- 165 (300)
T ss_dssp STTCEEEEETTTTEEEEECTT-SCEEEEECSSTT---------------CCEEEEEECTTSS---E-EEEETT-------
T ss_pred CCCCEEEEccCCCeEEEECCC-CCEEEccCCCCC---------------CCceeEEECCCCC---E-EEEecC-------
Confidence 356665554335678888887 655433221111 1345566666432 2 222211
Q ss_pred cceecCCCCCeEEEEEcCCCCeeecCCCCCcceecCCceEE--CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcc
Q 046476 170 AWMIDNHGTPECEIFTLGTTSWRKIDAPPSRIHFRRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEV 247 (376)
Q Consensus 170 ~~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~ 247 (376)
...+.+|+. ++.......... .....++.+ +|.+|+... . ...|..||. +.++..+..|...
T Consensus 166 --------~~~i~~~~~-~g~~~~~~~~~~--~~~~~~i~~d~~g~l~v~~~---~-~~~i~~~~~-~g~~~~~~~~~~~ 229 (300)
T 2qc5_A 166 --------NNSIGRITN-TGKLEEYPLPTN--AAAPVGITSGNDGALWFVEI---M-GNKIGRITT-TGEISEYDIPTPN 229 (300)
T ss_dssp --------TTEEEEECT-TCCEEEEECSST--TCCEEEEEECTTSSEEEEET---T-TTEEEEECT-TCCEEEEECSSTT
T ss_pred --------CCeEEEECC-CCcEEEeeCCCC--CCCcceEEECCCCCEEEEcc---C-CCEEEEEcC-CCcEEEEECCCCC
Confidence 234566666 555544321110 001223334 577766543 1 567999999 6677777666432
Q ss_pred cCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccC
Q 046476 248 RKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSS 326 (376)
Q Consensus 248 ~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~ 326 (376)
.....+... +|.|++.... ...+.++ +.. .... .+. ++.. . .....+++..+|.+++..
T Consensus 230 ~~~~~i~~d~~g~l~v~~~~----~~~i~~~--~~~-----g~~~-~~~-~~~~-~--~~~~~i~~~~~g~l~v~~---- 289 (300)
T 2qc5_A 230 ARPHAITAGKNSEIWFTEWG----ANQIGRI--TND-----NTIQ-EYQ-LQTE-N--AEPHGITFGKDGSVWFAL---- 289 (300)
T ss_dssp CCEEEEEECSTTCEEEEETT----TTEEEEE--CTT-----SCEE-EEE-CCST-T--CCCCCEEECTTSCEEEEC----
T ss_pred CCceEEEECCCCCEEEeccC----CCeEEEE--CCC-----CcEE-EEE-CCcc-C--CccceeEeCCCCCEEEEc----
Confidence 222334333 6788777643 3444444 322 1222 222 2311 1 122446667788888877
Q ss_pred CCcEEEEEeCC
Q 046476 327 LVSRVFIYDLK 337 (376)
Q Consensus 327 ~~~~v~~ydl~ 337 (376)
.. .++.+|++
T Consensus 290 ~~-~i~~~~p~ 299 (300)
T 2qc5_A 290 KC-KIGKLNLN 299 (300)
T ss_dssp SS-EEEEEEEC
T ss_pred cC-ceEEeCCC
Confidence 44 89999885
No 61
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=81.70 E-value=31 Score=31.79 Aligned_cols=111 Identities=13% Similarity=0.115 Sum_probs=62.9
Q ss_pred CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcccCcceeEecCC-eEEEEEecCCCCCCeEEEEEEccCCCCCCCc
Q 046476 211 NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQAEE-KLGVLDCDDFRSKNKIRVWILKDYGRGGGEV 289 (376)
Q Consensus 211 ~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~~~g-~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~ 289 (376)
+|.+||... ....|..+|+++.+...+...... .... ..-+| .|++.... .. -.||.++.. ..
T Consensus 141 ~g~lyv~d~----~~~~I~~id~~~g~~~~~~~~~~~-~~ia-~~~~g~~l~~~d~~----~~-~~I~~~d~~-----~~ 204 (409)
T 3hrp_A 141 NNTVLAYQR----DDPRVRLISVDDNKVTTVHPGFKG-GKPA-VTKDKQRVYSIGWE----GT-HTVYVYMKA-----SG 204 (409)
T ss_dssp TTEEEEEET----TTTEEEEEETTTTEEEEEEETCCB-CBCE-ECTTSSEEEEEBSS----TT-CEEEEEEGG-----GT
T ss_pred CCCEEEEec----CCCcEEEEECCCCEEEEeeccCCC-Ccee-EecCCCcEEEEecC----CC-ceEEEEEcC-----CC
Confidence 689888765 157899999998877766433221 1222 22244 45555432 11 167777654 22
Q ss_pred ee--EEEEEeecccccccCcEeEEEcc-CCcEEEEecccCCCcEEEEEeCCCCcEEEE
Q 046476 290 WI--RRDYVFRFDTIMFRPPIPVSNSN-NGEILLTEYKSSLVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 290 W~--~~~~ii~~~~~~~~~~~~v~~~~-~g~il~~~~~~~~~~~v~~ydl~t~~~~~v 344 (376)
|. .... +..... ....-+++.. +|.|++.. ..+.++.||++++....+
T Consensus 205 ~~~~~~g~-~~~~~~--~~p~~iav~p~~g~lyv~d----~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 205 WAPTRIGQ-LGSTFS--GKIGAVALDETEEWLYFVD----SNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp TCEEEEEE-CCTTSC--SCCCBCEECTTSSEEEEEC----TTCEEEEEETTTCCEEEE
T ss_pred ceeEEeee-ccchhc--CCcEEEEEeCCCCeEEEEE----CCCcEEEEECCCCCEEEE
Confidence 33 2212 222111 1123457777 67777754 567899999998876555
No 62
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=80.66 E-value=30 Score=30.65 Aligned_cols=95 Identities=14% Similarity=0.209 Sum_probs=50.8
Q ss_pred CCEEEEEEcCCce-eEEEe-CCCcccCcceeEe-cCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeeccc
Q 046476 225 KPVLAVFDVKEEK-FDIVK-LPDEVRKHHDLIQ-AEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDT 301 (376)
Q Consensus 225 ~~~il~fDl~~e~-~~~i~-~P~~~~~~~~L~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~ 301 (376)
++.|..+|+.++. ...+. +......-..+.- -+|.+.+.... ...+.||.++. ..|..... +..+.
T Consensus 126 D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~----d~~i~~w~~~~------~~~~~~~~-~~~h~ 194 (345)
T 3fm0_A 126 DKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASY----DDTVKLYREEE------DDWVCCAT-LEGHE 194 (345)
T ss_dssp TSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEET----TSCEEEEEEET------TEEEEEEE-ECCCS
T ss_pred CCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeC----CCcEEEEEecC------CCEEEEEE-ecCCC
Confidence 6678889987642 22221 1111011112222 24554444443 67899998764 34766666 44333
Q ss_pred ccccCcEeEEEccCCcEEEEecccCCCcEEEEEeC
Q 046476 302 IMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDL 336 (376)
Q Consensus 302 ~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl 336 (376)
. ....+++.++|..++.. +.++.|.+||.
T Consensus 195 ~---~v~~l~~sp~g~~l~s~---s~D~~v~iW~~ 223 (345)
T 3fm0_A 195 S---TVWSLAFDPSGQRLASC---SDDRTVRIWRQ 223 (345)
T ss_dssp S---CEEEEEECTTSSEEEEE---ETTSCEEEEEE
T ss_pred C---ceEEEEECCCCCEEEEE---eCCCeEEEecc
Confidence 2 22456667777766554 25677777774
No 63
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=78.42 E-value=55 Score=32.37 Aligned_cols=149 Identities=5% Similarity=-0.040 Sum_probs=77.7
Q ss_pred eEEEEEcCCCCeeecCCCCCcceecCCceEECceEEEEEeCCCCCCCEEEEEEcCCce---eEEEeCCCcccCcceeEec
Q 046476 180 ECEIFTLGTTSWRKIDAPPSRIHFRRQGLCANGFIHWIITNPRKTKPVLAVFDVKEEK---FDIVKLPDEVRKHHDLIQA 256 (376)
Q Consensus 180 ~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~---~~~i~~P~~~~~~~~L~~~ 256 (376)
.+.+++..++.|+.+..... .....+..+|.+|+.+.. ......|+.+|+++.+ |..+-.+........+...
T Consensus 253 ~l~~~~~~~~~~~~l~~~~~---~~~~~~~~~g~l~~~s~~-~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~ 328 (695)
T 2bkl_A 253 DVYWKRPGEKDFRLLVKGVG---AKYEVHAWKDRFYVLTDE-GAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV 328 (695)
T ss_dssp EEEEECTTCSSCEEEEECSS---CCEEEEEETTEEEEEECT-TCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE
T ss_pred EEEEEcCCCCceEEeecCCC---ceEEEEecCCcEEEEECC-CCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE
Confidence 44444555567776643311 112233456775555441 1126789999997654 6665433211111123334
Q ss_pred CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCc-EEEEecccCCCcEEEEEe
Q 046476 257 EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGE-ILLTEYKSSLVSRVFIYD 335 (376)
Q Consensus 257 ~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~-il~~~~~~~~~~~v~~yd 335 (376)
+|.|.+.... .....||+++-.| + .... +..... .....++...++. +++..........++.||
T Consensus 329 ~~~lv~~~~~----dg~~~l~~~~~~g---~----~~~~-l~~~~~--~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d 394 (695)
T 2bkl_A 329 GGHLSLEYLK----DATSEVRVATLKG---K----PVRT-VQLPGV--GAASNLMGLEDLDDAYYVFTSFTTPRQIYKTS 394 (695)
T ss_dssp TTEEEEEEEE----TTEEEEEEEETTC---C----EEEE-CCCSSS--SEECCCBSCTTCSEEEEEEEETTEEEEEEEEE
T ss_pred CCEEEEEEEE----CCEEEEEEEeCCC---C----eeEE-ecCCCC--eEEEEeecCCCCCEEEEEEcCCCCCCEEEEEE
Confidence 8888777665 6678899887432 1 2223 221100 0001123334554 544443334567899999
Q ss_pred CCCCcEEEEEE
Q 046476 336 LKTQERRAIKI 346 (376)
Q Consensus 336 l~t~~~~~v~~ 346 (376)
+++++.+.++-
T Consensus 395 ~~~g~~~~l~~ 405 (695)
T 2bkl_A 395 VSTGKSELWAK 405 (695)
T ss_dssp TTTCCEEEEEE
T ss_pred CCCCcEEEEec
Confidence 99988776653
No 64
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=78.31 E-value=36 Score=30.23 Aligned_cols=104 Identities=13% Similarity=0.147 Sum_probs=52.1
Q ss_pred CCEEEEEEcCCceeE-EEeCCCcccCcceeEec-CCe-EEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEE-----E
Q 046476 225 KPVLAVFDVKEEKFD-IVKLPDEVRKHHDLIQA-EEK-LGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDY-----V 296 (376)
Q Consensus 225 ~~~il~fDl~~e~~~-~i~~P~~~~~~~~L~~~-~g~-L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~-----i 296 (376)
.+.|..||+.+.+.. .+..... ....+... +|. +.++... ...+.||-++... ........ .
T Consensus 165 ~~~v~~~d~~~~~~~~~~~~~~~--~v~~~~~~~~~~~ll~~~~~----dg~i~i~d~~~~~----~~~~~~~~~~~~~~ 234 (408)
T 4a11_B 165 GPKVQLCDLKSGSCSHILQGHRQ--EILAVSWSPRYDYILATASA----DSRVKLWDVRRAS----GCLITLDQHNGKKS 234 (408)
T ss_dssp SSSEEEEESSSSCCCEEECCCCS--CEEEEEECSSCTTEEEEEET----TSCEEEEETTCSS----CCSEECCTTTTCSC
T ss_pred CCeEEEEeCCCcceeeeecCCCC--cEEEEEECCCCCcEEEEEcC----CCcEEEEECCCCC----cccccccccccccc
Confidence 667899999876543 2222211 11222222 343 4444443 6778999876531 11111000 0
Q ss_pred eecc---cccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcE
Q 046476 297 FRFD---TIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQER 341 (376)
Q Consensus 297 i~~~---~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~ 341 (376)
.... ...-.....+++.+++..++... .++.+.+||+++.+.
T Consensus 235 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~vwd~~~~~~ 279 (408)
T 4a11_B 235 QAVESANTAHNGKVNGLCFTSDGLHLLTVG---TDNRMRLWNSSNGEN 279 (408)
T ss_dssp CCTTTSSCSCSSCEEEEEECTTSSEEEEEE---TTSCEEEEETTTCCB
T ss_pred eeeccccccccCceeEEEEcCCCCEEEEec---CCCeEEEEECCCCcc
Confidence 0000 00001224456677887666542 678899999998654
No 65
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=78.21 E-value=33 Score=29.74 Aligned_cols=113 Identities=12% Similarity=0.110 Sum_probs=66.0
Q ss_pred EECceEEEEEeCCCCCCCEEEEEEcCCcee-EEEeCCCcccCcceeEecCCeEEEEEecCCCCCCeEEEEEEccCCCCCC
Q 046476 209 CANGFIHWIITNPRKTKPVLAVFDVKEEKF-DIVKLPDEVRKHHDLIQAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGG 287 (376)
Q Consensus 209 ~~~G~lywl~~~~~~~~~~il~fDl~~e~~-~~i~~P~~~~~~~~L~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~ 287 (376)
+.+|.+|--+. ......|..+|+++.+. ..+++|+.. ....+...+++|+++.-. .. .+|+.+-.
T Consensus 50 ~~~~~LyestG--~~g~S~v~~vD~~Tgkv~~~~~l~~~~-FgeGit~~g~~ly~ltw~----~~--~v~v~D~~----- 115 (262)
T 3nol_A 50 YRNGYFYESTG--LNGRSSIRKVDIESGKTLQQIELGKRY-FGEGISDWKDKIVGLTWK----NG--LGFVWNIR----- 115 (262)
T ss_dssp EETTEEEEEEE--ETTEEEEEEECTTTCCEEEEEECCTTC-CEEEEEEETTEEEEEESS----SS--EEEEEETT-----
T ss_pred EECCEEEEECC--CCCCceEEEEECCCCcEEEEEecCCcc-ceeEEEEeCCEEEEEEee----CC--EEEEEECc-----
Confidence 34787777665 11134899999998765 566777642 123356668899888643 33 45555532
Q ss_pred CceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcE-EEEEE
Q 046476 288 EVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQER-RAIKI 346 (376)
Q Consensus 288 ~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~-~~v~~ 346 (376)
.-..+.+ |+... ..+++..++..++... ....+..+|++|.+. +.|.+
T Consensus 116 -t~~~~~t-i~~~~------eG~glt~dg~~L~~Sd---Gs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 116 -NLRQVRS-FNYDG------EGWGLTHNDQYLIMSD---GTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp -TCCEEEE-EECSS------CCCCEEECSSCEEECC---SSSEEEEECTTTCSEEEEEEC
T ss_pred -cCcEEEE-EECCC------CceEEecCCCEEEEEC---CCCeEEEEcCCCCeEEEEEEe
Confidence 2334445 44321 2233444555444442 577899999998654 34444
No 66
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=78.09 E-value=22 Score=29.90 Aligned_cols=137 Identities=13% Similarity=0.133 Sum_probs=69.4
Q ss_pred CeEEEEEcCCCCeeecCCCCCcceecCCceEE--CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcccCcceeEec
Q 046476 179 PECEIFTLGTTSWRKIDAPPSRIHFRRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQA 256 (376)
Q Consensus 179 ~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~~ 256 (376)
..+.+|+.++.......... .....++.+ +|.+|+... .+.|..||..+.....+..+.. .....+...
T Consensus 46 ~~i~~~~~~~~~~~~~~~~~---~~~p~~i~~~~~g~l~v~~~-----~~~i~~~d~~~~~~~~~~~~~~-~~p~~i~~~ 116 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLPFNG---LYQPQGLAVDGAGTVYVTDF-----NNRVVTLAAGSNNQTVLPFDGL-NYPEGLAVD 116 (270)
T ss_dssp CEEEEECC-----EECCCCS---CCSCCCEEECTTCCEEEEET-----TTEEEEECTTCSCCEECCCCSC-SSEEEEEEC
T ss_pred CcEEEecCCCcccceEeeCC---cCCcceeEECCCCCEEEEcC-----CCEEEEEeCCCceEeeeecCCc-CCCcceEEC
Confidence 45666766665443332110 012234444 578666554 5689999999877665543221 122234433
Q ss_pred -CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEe
Q 046476 257 -EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYD 335 (376)
Q Consensus 257 -~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~yd 335 (376)
+|.|++.... ...+.+| +.. ...... . ..... ....-+++..+|.+++... ....|..||
T Consensus 117 ~~g~l~v~~~~----~~~i~~~--~~~----~~~~~~--~--~~~~~--~~p~~i~~~~~g~l~v~~~---~~~~i~~~~ 177 (270)
T 1rwi_B 117 TQGAVYVADRG----NNRVVKL--AAG----SKTQTV--L--PFTGL--NDPDGVAVDNSGNVYVTDT---DNNRVVKLE 177 (270)
T ss_dssp TTCCEEEEEGG----GTEEEEE--CTT----CCSCEE--C--CCCSC--CSCCCEEECTTCCEEEEEG---GGTEEEEEC
T ss_pred CCCCEEEEECC----CCEEEEE--ECC----CceeEe--e--ccccC--CCceeEEEeCCCCEEEEEC---CCCEEEEEe
Confidence 7788777654 4455444 322 111111 1 11111 1123466677788777652 356889999
Q ss_pred CCCCcEEE
Q 046476 336 LKTQERRA 343 (376)
Q Consensus 336 l~t~~~~~ 343 (376)
++++....
T Consensus 178 ~~~~~~~~ 185 (270)
T 1rwi_B 178 AESNNQVV 185 (270)
T ss_dssp TTTCCEEE
T ss_pred cCCCceEe
Confidence 88776543
No 67
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=77.52 E-value=38 Score=29.97 Aligned_cols=117 Identities=15% Similarity=0.117 Sum_probs=65.4
Q ss_pred Cce-EEEEEeCCCCCCCEEEEEEcCCceeEEEe----CCCcccCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCC
Q 046476 211 NGF-IHWIITNPRKTKPVLAVFDVKEEKFDIVK----LPDEVRKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGR 284 (376)
Q Consensus 211 ~G~-lywl~~~~~~~~~~il~fDl~~e~~~~i~----~P~~~~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~ 284 (376)
+|. +|.... . .+.|..||+.+.++..+. .|........+... +|+..++... .....+.||.++..
T Consensus 221 dg~~l~v~~~---~-~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~--~~~~~i~v~~~~~~-- 292 (361)
T 3scy_A 221 DGKFAYLINE---I-GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNR--LKADGVAIFKVDET-- 292 (361)
T ss_dssp TSSEEEEEET---T-TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEEC--SSSCEEEEEEECTT--
T ss_pred CCCEEEEEcC---C-CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECC--CCCCEEEEEEEcCC--
Confidence 575 444432 1 678999999887775542 23221112234333 6764334332 11478999999742
Q ss_pred CCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEE--EeCCCCcEEEE
Q 046476 285 GGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFI--YDLKTQERRAI 344 (376)
Q Consensus 285 g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~--ydl~t~~~~~v 344 (376)
...+..+.. ++. .. ...-+++..+|+.++.... ..+.+.+ +|+++++++.+
T Consensus 293 --~g~~~~~~~-~~~-g~---~~~~~~~spdg~~l~~~~~--~~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 293 --NGTLTKVGY-QLT-GI---HPRNFIITPNGKYLLVACR--DTNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp --TCCEEEEEE-EEC-SS---CCCEEEECTTSCEEEEEET--TTTEEEEEEECTTTCCEEEC
T ss_pred --CCcEEEeeE-ecC-CC---CCceEEECCCCCEEEEEEC--CCCCEEEEEEECCCCcEeec
Confidence 245666655 443 11 1245677888886655421 3344544 78888888765
No 68
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=77.25 E-value=34 Score=29.39 Aligned_cols=139 Identities=13% Similarity=0.129 Sum_probs=71.6
Q ss_pred CCeEEEEEcCCCCeeecCCCCCccee-cCCceEE--CceEEEEEeCCCCCCCEEEEEEcCCceeEE-EeCCCcccCccee
Q 046476 178 TPECEIFTLGTTSWRKIDAPPSRIHF-RRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKEEKFDI-VKLPDEVRKHHDL 253 (376)
Q Consensus 178 ~~~~~vys~~t~~Wr~~~~~~~~~~~-~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~-i~~P~~~~~~~~L 253 (376)
...+.+|+..++.......... +. .-..+.+ +|.....+. .++.|..||+.+.+... +..... ....+
T Consensus 118 d~~i~~~d~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~----~dg~v~~~d~~~~~~~~~~~~~~~--~i~~~ 189 (337)
T 1gxr_A 118 ASTLSIWDLAAPTPRIKAELTS--SAPACYALAISPDSKVCFSCC----SDGNIAVWDLHNQTLVRQFQGHTD--GASCI 189 (337)
T ss_dssp SSEEEEEECCCC--EEEEEEEC--SSSCEEEEEECTTSSEEEEEE----TTSCEEEEETTTTEEEEEECCCSS--CEEEE
T ss_pred CCcEEEEECCCCCcceeeeccc--CCCceEEEEECCCCCEEEEEe----CCCcEEEEeCCCCceeeeeecccC--ceEEE
Confidence 3578888888776433211100 00 0011111 454444444 16779999998865433 332221 12223
Q ss_pred Eec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEE
Q 046476 254 IQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVF 332 (376)
Q Consensus 254 ~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~ 332 (376)
... +|.+.++... ...+.+|-++.. ..... +.... ....+++..++..++... .++.+.
T Consensus 190 ~~~~~~~~l~~~~~----dg~i~~~d~~~~--------~~~~~-~~~~~----~v~~~~~s~~~~~l~~~~---~~~~i~ 249 (337)
T 1gxr_A 190 DISNDGTKLWTGGL----DNTVRSWDLREG--------RQLQQ-HDFTS----QIFSLGYCPTGEWLAVGM---ESSNVE 249 (337)
T ss_dssp EECTTSSEEEEEET----TSEEEEEETTTT--------EEEEE-EECSS----CEEEEEECTTSSEEEEEE---TTSCEE
T ss_pred EECCCCCEEEEEec----CCcEEEEECCCC--------ceEee-ecCCC----ceEEEEECCCCCEEEEEc---CCCcEE
Confidence 222 5655555544 678999976542 12222 22111 224456667777665542 578899
Q ss_pred EEeCCCCcEEEE
Q 046476 333 IYDLKTQERRAI 344 (376)
Q Consensus 333 ~ydl~t~~~~~v 344 (376)
+||+++++...+
T Consensus 250 ~~~~~~~~~~~~ 261 (337)
T 1gxr_A 250 VLHVNKPDKYQL 261 (337)
T ss_dssp EEETTSSCEEEE
T ss_pred EEECCCCCeEEE
Confidence 999988876543
No 69
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=77.10 E-value=36 Score=29.46 Aligned_cols=101 Identities=14% Similarity=0.064 Sum_probs=50.2
Q ss_pred CCEEEEEEcCCceeEE-EeCCCcccCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeec-cc
Q 046476 225 KPVLAVFDVKEEKFDI-VKLPDEVRKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRF-DT 301 (376)
Q Consensus 225 ~~~il~fDl~~e~~~~-i~~P~~~~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~-~~ 301 (376)
++.|..||+.+.+... +..... ...+... ++.+. +... ...+.||-++.. ...+......... ..
T Consensus 236 Dg~i~iwd~~~~~~~~~~~~~~~---v~~~~~~~~~~~~-~~~~----d~~i~iwd~~~~----~~~~~~~~~~~~~~~~ 303 (340)
T 4aow_A 236 DGQAMLWDLNEGKHLYTLDGGDI---INALCFSPNRYWL-CAAT----GPSIKIWDLEGK----IIVDELKQEVISTSSK 303 (340)
T ss_dssp TCEEEEEETTTTEEEEEEECSSC---EEEEEECSSSSEE-EEEE----TTEEEEEETTTT----EEEEEECCC-------
T ss_pred CCeEEEEEeccCceeeeecCCce---EEeeecCCCCcee-eccC----CCEEEEEECCCC----eEEEeccccceeeecc
Confidence 6789999998765432 232221 1122222 34443 3333 578899976532 1111111000000 00
Q ss_pred ccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCc
Q 046476 302 IMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQE 340 (376)
Q Consensus 302 ~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~ 340 (376)
..-.....+++..+|..|+.. +.++.|.+||++|++
T Consensus 304 ~h~~~v~~l~~s~dg~~l~sg---s~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 304 AEPPQCTSLAWSADGQTLFAG---YTDNLVRVWQVTIGT 339 (340)
T ss_dssp CCCCCEEEEEECTTSSEEEEE---ETTSCEEEEEEEC--
T ss_pred CCCCCEEEEEECCCCCEEEEE---eCCCEEEEEeCCCcC
Confidence 000122446777888877765 268899999998864
No 70
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=76.83 E-value=38 Score=29.68 Aligned_cols=149 Identities=9% Similarity=0.083 Sum_probs=76.9
Q ss_pred CCeEEEEEcC-CCCeeecCCC--CCcceecCCceEECce-EEEEEeCCCCCCCEEEEEEcC--CceeEEEe----CCCcc
Q 046476 178 TPECEIFTLG-TTSWRKIDAP--PSRIHFRRQGLCANGF-IHWIITNPRKTKPVLAVFDVK--EEKFDIVK----LPDEV 247 (376)
Q Consensus 178 ~~~~~vys~~-t~~Wr~~~~~--~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~il~fDl~--~e~~~~i~----~P~~~ 247 (376)
...+.+|+.. ++........ ........-...-||. +|.... . .+.|..||+. +.++..+. .|...
T Consensus 161 ~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~---~-~~~v~v~~~~~~~g~~~~~~~~~~~~~~~ 236 (347)
T 3hfq_A 161 SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGE---L-SSQIASLKYDTQTGAFTQLGIVKTIPADY 236 (347)
T ss_dssp TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEET---T-TTEEEEEEEETTTTEEEEEEEEESSCTTC
T ss_pred CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeC---C-CCEEEEEEecCCCCceEEeeeeeecCCCC
Confidence 3577888887 4554432111 0000001111222676 444433 1 4566677766 46654432 23321
Q ss_pred ---cCcceeEe-cCCe-EEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEe
Q 046476 248 ---RKHHDLIQ-AEEK-LGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTE 322 (376)
Q Consensus 248 ---~~~~~L~~-~~g~-L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~ 322 (376)
.....+.. -+|+ |++.... ...+.||.++.. ..+..+.. ++.... ....+++..+|+.++..
T Consensus 237 ~~~~~~~~i~~spdG~~l~v~~~~----~~~v~v~~~~~~-----g~~~~~~~-~~~~~~---~~~~~~~spdg~~l~v~ 303 (347)
T 3hfq_A 237 TAHNGAAAIRLSHDGHFLYVSNRG----YNTLAVFAVTAD-----GHLTLIQQ-ISTEGD---FPRDFDLDPTEAFVVVV 303 (347)
T ss_dssp CSCCEEEEEEECTTSCEEEEEEET----TTEEEEEEECGG-----GCEEEEEE-EECSSS---CCCEEEECTTSSEEEEE
T ss_pred CCCCcceeEEECCCCCEEEEEeCC----CCEEEEEEECCC-----CcEEEeEE-EecCCC---CcCeEEECCCCCEEEEE
Confidence 11122333 3676 5555543 688999998753 24555555 443211 12456778888855544
Q ss_pred cccCCCcEEEEE--eCCCCcEEEEE
Q 046476 323 YKSSLVSRVFIY--DLKTQERRAIK 345 (376)
Q Consensus 323 ~~~~~~~~v~~y--dl~t~~~~~v~ 345 (376)
.. ..+.+.+| |.++++++.+.
T Consensus 304 ~~--~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 304 NQ--NTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp ET--TTTEEEEEEECTTTCCEEEEE
T ss_pred Ec--CCCcEEEEEEeCCCCeEEecc
Confidence 21 34667777 88888888765
No 71
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=76.37 E-value=39 Score=29.60 Aligned_cols=98 Identities=13% Similarity=0.126 Sum_probs=57.8
Q ss_pred CCEEEEEEcCCceeE-EEeCCCcccCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccc
Q 046476 225 KPVLAVFDVKEEKFD-IVKLPDEVRKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTI 302 (376)
Q Consensus 225 ~~~il~fDl~~e~~~-~i~~P~~~~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~ 302 (376)
++.|..||+.+.+.. .+..... .-..+.-. +|.+.+.... ...+.||-++.. ..... +..+.-
T Consensus 185 dg~i~iwd~~~~~~~~~~~~h~~--~v~~l~~spd~~~l~s~s~----dg~i~iwd~~~~--------~~~~~-~~~h~~ 249 (321)
T 3ow8_A 185 DGIINIFDIATGKLLHTLEGHAM--PIRSLTFSPDSQLLVTASD----DGYIKIYDVQHA--------NLAGT-LSGHAS 249 (321)
T ss_dssp TSCEEEEETTTTEEEEEECCCSS--CCCEEEECTTSCEEEEECT----TSCEEEEETTTC--------CEEEE-ECCCSS
T ss_pred CCeEEEEECCCCcEEEEEcccCC--ceeEEEEcCCCCEEEEEcC----CCeEEEEECCCc--------ceeEE-EcCCCC
Confidence 677999999887643 2332221 12223322 6666555443 678999977642 12233 333221
Q ss_pred cccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEEE
Q 046476 303 MFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERRA 343 (376)
Q Consensus 303 ~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~~ 343 (376)
....+++.+++..++.. +.++.+.+||+++++...
T Consensus 250 ---~v~~~~~sp~~~~l~s~---s~D~~v~iwd~~~~~~~~ 284 (321)
T 3ow8_A 250 ---WVLNVAFCPDDTHFVSS---SSDKSVKVWDVGTRTCVH 284 (321)
T ss_dssp ---CEEEEEECTTSSEEEEE---ETTSCEEEEETTTTEEEE
T ss_pred ---ceEEEEECCCCCEEEEE---eCCCcEEEEeCCCCEEEE
Confidence 22456777788776655 267889999999877644
No 72
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=76.13 E-value=33 Score=28.65 Aligned_cols=190 Identities=11% Similarity=0.020 Sum_probs=94.6
Q ss_pred cCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcccceecCCCCC
Q 046476 100 VGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSYAWMIDNHGTP 179 (376)
Q Consensus 100 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~~~ 179 (376)
....++++|+.+++...+..... ....+.+.|... +-++ .. ..
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~-----------------~v~~~~~spdg~-~l~~--~~-----------------~~ 62 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPE-----------------LFEAPNWSPDGK-YLLL--NS-----------------EG 62 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESS-----------------CCEEEEECTTSS-EEEE--EE-----------------TT
T ss_pred cceeEEEEeCCCCceeeeccCCc-----------------ceEeeEECCCCC-EEEE--Ec-----------------CC
Confidence 35679999999998876544211 223444555432 3222 11 24
Q ss_pred eEEEEEcCC-CCeeecCCCCCcceecCCceEECceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcccCcceeEec-C
Q 046476 180 ECEIFTLGT-TSWRKIDAPPSRIHFRRQGLCANGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQA-E 257 (376)
Q Consensus 180 ~~~vys~~t-~~Wr~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~~-~ 257 (376)
.+.+++..+ +....+...............-+|.....+.........|..+|+.+.+...+..... ...+.-. +
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~spd 139 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLP---SYWHGWSPD 139 (297)
T ss_dssp EEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSS---EEEEEECTT
T ss_pred eEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCC---ccceEECCC
Confidence 678888888 7666554322100001112222564433333111125678888888776554433221 1112222 5
Q ss_pred Ce-EEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeC
Q 046476 258 EK-LGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDL 336 (376)
Q Consensus 258 g~-L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl 336 (376)
|+ |++.... ...+.||.++..+ .... . +..... ....+.+..+|..++..........++.+++
T Consensus 140 g~~l~~~~~~----~~~~~l~~~~~~~----~~~~---~-~~~~~~---~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~ 204 (297)
T 2ojh_A 140 GKSFTYCGIR----DQVFDIYSMDIDS----GVET---R-LTHGEG---RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRV 204 (297)
T ss_dssp SSEEEEEEEE----TTEEEEEEEETTT----CCEE---E-CCCSSS---CEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred CCEEEEEECC----CCceEEEEEECCC----Ccce---E-cccCCC---ccccceECCCCCEEEEEecCCCCccEEEECC
Confidence 55 4444443 5678999987432 2221 2 221111 1134555667765443321123456777777
Q ss_pred CCCcEEEE
Q 046476 337 KTQERRAI 344 (376)
Q Consensus 337 ~t~~~~~v 344 (376)
.++..+.+
T Consensus 205 ~~~~~~~~ 212 (297)
T 2ojh_A 205 DGSSVERI 212 (297)
T ss_dssp TSSCEEEC
T ss_pred CCCCcEEE
Confidence 77766554
No 73
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=75.95 E-value=39 Score=29.40 Aligned_cols=56 Identities=18% Similarity=0.235 Sum_probs=32.4
Q ss_pred CCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCC----cEEEEecccCCCcEEEEEeCCC
Q 046476 271 KNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNG----EILLTEYKSSLVSRVFIYDLKT 338 (376)
Q Consensus 271 ~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g----~il~~~~~~~~~~~v~~ydl~t 338 (376)
...+.||-++. ...|..... +..+.- ....+++.+++ ..+... +.++.|.+||+++
T Consensus 188 D~~v~lWd~~~-----~~~~~~~~~-l~~h~~---~V~~v~~sp~~~~~~~~las~---s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 188 DNLIKLWKEEE-----DGQWKEEQK-LEAHSD---WVRDVAWAPSIGLPTSTIASC---SQDGRVFIWTCDD 247 (316)
T ss_dssp TSBCCEEEECT-----TSCEEEEEC-CBCCSS---CEEEEECCCCSSCSCCEEEEE---ETTCEEEEEECSS
T ss_pred CCeEEEEEeCC-----CCccceeee-cccCCC---ceEEEEecCCCCCCCceEEEE---cCCCeEEEEEccC
Confidence 67899998853 245766655 443321 22345555543 444443 2677888888765
No 74
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=75.39 E-value=35 Score=28.53 Aligned_cols=189 Identities=10% Similarity=0.077 Sum_probs=96.5
Q ss_pred ccceEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcc
Q 046476 90 INGFICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSY 169 (376)
Q Consensus 90 ~nGLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~ 169 (376)
.+|-+.+.. ....++++||.++....++..... ...++.+|+... +.... ..
T Consensus 76 ~~g~l~v~~-~~~~i~~~d~~~~~~~~~~~~~~~----------------~p~~i~~~~~g~---l~v~~-~~------- 127 (270)
T 1rwi_B 76 GAGTVYVTD-FNNRVVTLAAGSNNQTVLPFDGLN----------------YPEGLAVDTQGA---VYVAD-RG------- 127 (270)
T ss_dssp TTCCEEEEE-TTTEEEEECTTCSCCEECCCCSCS----------------SEEEEEECTTCC---EEEEE-GG-------
T ss_pred CCCCEEEEc-CCCEEEEEeCCCceEeeeecCCcC----------------CCcceEECCCCC---EEEEE-CC-------
Confidence 356555554 266889999988776655432211 345666776432 22221 11
Q ss_pred cceecCCCCCeEEEEEcCCCCeeecCCCCCcceecCCceEE--CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcc
Q 046476 170 AWMIDNHGTPECEIFTLGTTSWRKIDAPPSRIHFRRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEV 247 (376)
Q Consensus 170 ~~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~ 247 (376)
...+.+|+.++.......... .....++.+ +|.+|+... . ...|..||..+...........
T Consensus 128 --------~~~i~~~~~~~~~~~~~~~~~---~~~p~~i~~~~~g~l~v~~~---~-~~~i~~~~~~~~~~~~~~~~~~- 191 (270)
T 1rwi_B 128 --------NNRVVKLAAGSKTQTVLPFTG---LNDPDGVAVDNSGNVYVTDT---D-NNRVVKLEAESNNQVVLPFTDI- 191 (270)
T ss_dssp --------GTEEEEECTTCCSCEECCCCS---CCSCCCEEECTTCCEEEEEG---G-GTEEEEECTTTCCEEECCCSSC-
T ss_pred --------CCEEEEEECCCceeEeecccc---CCCceeEEEeCCCCEEEEEC---C-CCEEEEEecCCCceEeecccCC-
Confidence 235566655554333221110 012334444 588766554 1 5689999998766543322111
Q ss_pred cCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccC
Q 046476 248 RKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSS 326 (376)
Q Consensus 248 ~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~ 326 (376)
.....|... +|.|++.... ...+.+| +..+ .... . +..... .....+++..+|.+++...
T Consensus 192 ~~p~~i~~d~~g~l~v~~~~----~~~v~~~--~~~~---~~~~----~-~~~~~~--~~p~~i~~~~~g~l~v~~~--- 252 (270)
T 1rwi_B 192 TAPWGIAVDEAGTVYVTEHN----TNQVVKL--LAGS---TTST----V-LPFTGL--NTPLAVAVDSDRTVYVADR--- 252 (270)
T ss_dssp CSEEEEEECTTCCEEEEETT----TSCEEEE--CTTC---SCCE----E-CCCCSC--SCEEEEEECTTCCEEEEEG---
T ss_pred CCceEEEECCCCCEEEEECC----CCcEEEE--cCCC---Ccce----e-eccCCC--CCceeEEECCCCCEEEEEC---
Confidence 112234333 6677777643 3444444 3221 1111 1 121111 1124456677888887763
Q ss_pred CCcEEEEEeCCCCcE
Q 046476 327 LVSRVFIYDLKTQER 341 (376)
Q Consensus 327 ~~~~v~~ydl~t~~~ 341 (376)
.++.|..|++..++.
T Consensus 253 ~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 253 GNDRVVKLTSLEHHH 267 (270)
T ss_dssp GGTEEEEECCCGGGS
T ss_pred CCCEEEEEcCCCccc
Confidence 577899999876653
No 75
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=74.82 E-value=38 Score=28.65 Aligned_cols=112 Identities=10% Similarity=0.088 Sum_probs=63.3
Q ss_pred CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcccCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCc
Q 046476 211 NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEV 289 (376)
Q Consensus 211 ~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~ 289 (376)
+|.+|+... . ...|..+|+ +.++..+..|........+... +|.|++.... ...+.+| +..+ .
T Consensus 151 ~g~l~v~~~---~-~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~----~~~i~~~--~~~g-----~ 214 (299)
T 2z2n_A 151 DNALWFTEN---Q-NNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEII----GNKIGRI--TTSG-----E 214 (299)
T ss_dssp TSCEEEEET---T-TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETT----TTEEEEE--CTTC-----C
T ss_pred CCCEEEEeC---C-CCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccC----CceEEEE--CCCC-----c
Confidence 577766543 1 568999999 7777777666433222234333 6888777643 3444444 4321 2
Q ss_pred eeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEEEEEEC
Q 046476 290 WIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERRAIKIP 347 (376)
Q Consensus 290 W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~~v~~~ 347 (376)
... .. ++. .. .....+++..+|.+++... ....|..||+ +++++.+.+.
T Consensus 215 ~~~-~~-~~~-~~--~~~~~i~~~~~g~l~v~~~---~~~~i~~~d~-~g~~~~~~~~ 263 (299)
T 2z2n_A 215 ITE-FK-IPT-PN--ARPHAITAGAGIDLWFTEW---GANKIGRLTS-NNIIEEYPIQ 263 (299)
T ss_dssp EEE-EE-CSS-TT--CCEEEEEECSTTCEEEEET---TTTEEEEEET-TTEEEEEECS
T ss_pred EEE-EE-CCC-CC--CCceeEEECCCCCEEEecc---CCceEEEECC-CCceEEEeCC
Confidence 222 22 221 11 1123456677888887762 4678999999 4666665443
No 76
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=74.56 E-value=39 Score=28.67 Aligned_cols=206 Identities=15% Similarity=0.118 Sum_probs=106.0
Q ss_pred cccceEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCc
Q 046476 89 LINGFICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSS 168 (376)
Q Consensus 89 s~nGLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~ 168 (376)
+.+|-+.+.......+.++||..+....++...... +.. ....++.+++..+. ++..... .
T Consensus 38 ~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~-----~~~------~~p~~i~~~~~~g~--l~v~~~~-~----- 98 (286)
T 1q7f_A 38 NAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRD-----SQL------LYPNRVAVVRNSGD--IIVTERS-P----- 98 (286)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSST-----TCB------SSEEEEEEETTTTE--EEEEECG-G-----
T ss_pred CCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCc-----ccc------cCceEEEEEcCCCe--EEEEcCC-C-----
Confidence 345666666445678999999866655555422111 000 13445555433332 2222110 0
Q ss_pred ccceecCCCCCeEEEEEcCCCCeeecCCCCCcceecCCceEE--CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCc
Q 046476 169 YAWMIDNHGTPECEIFTLGTTSWRKIDAPPSRIHFRRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDE 246 (376)
Q Consensus 169 ~~~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~ 246 (376)
...+.+|+.....-+.+..... . ...++.+ +|.+|.... . ...|..||...+....+..+..
T Consensus 99 ---------~~~i~~~d~~g~~~~~~~~~~~--~-~~~~i~~~~~g~l~v~~~---~-~~~i~~~~~~g~~~~~~~~~~~ 162 (286)
T 1q7f_A 99 ---------THQIQIYNQYGQFVRKFGATIL--Q-HPRGVTVDNKGRIIVVEC---K-VMRVIIFDQNGNVLHKFGCSKH 162 (286)
T ss_dssp ---------GCEEEEECTTSCEEEEECTTTC--S-CEEEEEECTTSCEEEEET---T-TTEEEEECTTSCEEEEEECTTT
T ss_pred ---------CCEEEEECCCCcEEEEecCccC--C-CceEEEEeCCCCEEEEEC---C-CCEEEEEcCCCCEEEEeCCCCc
Confidence 2456667643332222221110 0 1122333 577665443 1 5789999988776666654332
Q ss_pred ccCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEeccc
Q 046476 247 VRKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKS 325 (376)
Q Consensus 247 ~~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~ 325 (376)
......+... +|.|++.... ...+.+|-. .+ .. ... +..... +....-+++..+|.+++...
T Consensus 163 ~~~p~~i~~~~~g~l~v~~~~----~~~i~~~~~--~g-----~~--~~~-~~~~g~-~~~p~~i~~d~~G~l~v~~~-- 225 (286)
T 1q7f_A 163 LEFPNGVVVNDKQEIFISDNR----AHCVKVFNY--EG-----QY--LRQ-IGGEGI-TNYPIGVGINSNGEILIADN-- 225 (286)
T ss_dssp CSSEEEEEECSSSEEEEEEGG----GTEEEEEET--TC-----CE--EEE-ESCTTT-SCSEEEEEECTTCCEEEEEC--
T ss_pred cCCcEEEEECCCCCEEEEECC----CCEEEEEcC--CC-----CE--EEE-EccCCc-cCCCcEEEECCCCCEEEEeC--
Confidence 2122234433 6888777654 566666643 21 12 223 332211 12123467777888888772
Q ss_pred CCCc-EEEEEeCCCCcEEEEEEC
Q 046476 326 SLVS-RVFIYDLKTQERRAIKIP 347 (376)
Q Consensus 326 ~~~~-~v~~ydl~t~~~~~v~~~ 347 (376)
... .|..||.+.+.++.+...
T Consensus 226 -~~~~~i~~~~~~g~~~~~~~~~ 247 (286)
T 1q7f_A 226 -HNNFNLTIFTQDGQLISALESK 247 (286)
T ss_dssp -SSSCEEEEECTTSCEEEEEEES
T ss_pred -CCCEEEEEECCCCCEEEEEccc
Confidence 344 899999988877777553
No 77
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=74.49 E-value=42 Score=28.98 Aligned_cols=140 Identities=11% Similarity=0.091 Sum_probs=67.1
Q ss_pred CeEEEEEcC--CCCeeecCCCCCcceecCCceEE--CceEEEEEeCCCCCCCEEEEEEcCCc-eeEEEe-CCCcccCcce
Q 046476 179 PECEIFTLG--TTSWRKIDAPPSRIHFRRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKEE-KFDIVK-LPDEVRKHHD 252 (376)
Q Consensus 179 ~~~~vys~~--t~~Wr~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e-~~~~i~-~P~~~~~~~~ 252 (376)
..+.+|+.. ++.++.+..... ......+.+ +|...+.+. .. .+.|..||+.+. ....+. .+.. .....
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~--~~-~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~ 133 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESAL--PGSLTHISTDHQGQFVFVGS--YN-AGNVSVTRLEDGLPVGVVDVVEGL-DGCHS 133 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEEC--SSCCSEEEECTTSSEEEEEE--TT-TTEEEEEEEETTEEEEEEEEECCC-TTBCC
T ss_pred CeEEEEEecCCCCceeecccccc--CCCCcEEEEcCCCCEEEEEe--cC-CCeEEEEECCCCccccccccccCC-CCceE
Confidence 567777776 666664432210 001122222 465444443 11 567889998422 222221 1111 11122
Q ss_pred eE-ecCCe-EEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEE--EEeecccccccCcEeEEEccCCcEEEEecccCCC
Q 046476 253 LI-QAEEK-LGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRD--YVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLV 328 (376)
Q Consensus 253 L~-~~~g~-L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~--~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~ 328 (376)
+. .-+|+ |++.... ...+.+|-++.. ....... . +..... .....+++.++|..++... ..+
T Consensus 134 ~~~s~dg~~l~~~~~~----~~~v~~~d~~~~-----~~~~~~~~~~-~~~~~~--~~~~~~~~~pdg~~l~~~~--~~~ 199 (343)
T 1ri6_A 134 ANISPDNRTLWVPALK----QDRICLFTVSDD-----GHLVAQDPAE-VTTVEG--AGPRHMVFHPNEQYAYCVN--ELN 199 (343)
T ss_dssp CEECTTSSEEEEEEGG----GTEEEEEEECTT-----SCEEEEEEEE-EECSTT--CCEEEEEECTTSSEEEEEE--TTT
T ss_pred EEECCCCCEEEEecCC----CCEEEEEEecCC-----Cceeeecccc-cccCCC--CCcceEEECCCCCEEEEEe--CCC
Confidence 32 23554 5444423 678999988753 2344433 2 121111 1113467777887554431 256
Q ss_pred cEEEEEeCCC
Q 046476 329 SRVFIYDLKT 338 (376)
Q Consensus 329 ~~v~~ydl~t 338 (376)
..+.+||++.
T Consensus 200 ~~i~~~~~~~ 209 (343)
T 1ri6_A 200 SSVDVWELKD 209 (343)
T ss_dssp TEEEEEESSC
T ss_pred CEEEEEEecC
Confidence 7899999953
No 78
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=74.41 E-value=47 Score=29.60 Aligned_cols=101 Identities=7% Similarity=0.020 Sum_probs=52.5
Q ss_pred CCEEEEEEcCCceeEE-EeCCCcccCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCCC-------CCCce-----
Q 046476 225 KPVLAVFDVKEEKFDI-VKLPDEVRKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRG-------GGEVW----- 290 (376)
Q Consensus 225 ~~~il~fDl~~e~~~~-i~~P~~~~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g-------~~~~W----- 290 (376)
++.|..||+.+.+... +..... ....+.-. +|.+.++... ...+.||-++..... ....|
T Consensus 309 d~~i~i~d~~~~~~~~~~~~~~~--~i~~~~~s~~~~~l~~~~~----dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (425)
T 1r5m_A 309 DGSVRLWSLKQNTLLALSIVDGV--PIFAGRISQDGQKYAVAFM----DGQVNVYDLKKLNSKSRSLYGNRDGILNPLPI 382 (425)
T ss_dssp TSEEEEEETTTTEEEEEEECTTC--CEEEEEECTTSSEEEEEET----TSCEEEEECHHHHC--------------CEEC
T ss_pred CCcEEEEECCCCcEeEecccCCc--cEEEEEEcCCCCEEEEEEC----CCeEEEEECCCCccceeeeecccccccCcccc
Confidence 7789999998766433 232221 11222222 5665555444 678999988643100 00111
Q ss_pred eEEEEEeeccccccc-CcEeEEEccCCcEEEEecccCCCcEEEEEeCC
Q 046476 291 IRRDYVFRFDTIMFR-PPIPVSNSNNGEILLTEYKSSLVSRVFIYDLK 337 (376)
Q Consensus 291 ~~~~~ii~~~~~~~~-~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~ 337 (376)
..+.. +..... . ....+++..++..++... .++.+.+||++
T Consensus 383 ~~~~~-~~~~~~--~~~v~~~~~s~~~~~l~~~~---~dg~i~iw~~~ 424 (425)
T 1r5m_A 383 PLYAS-YQSSQD--NDYIFDLSWNCAGNKISVAY---SLQEGSVVAIP 424 (425)
T ss_dssp CEEEE-ECCTTC--CCCEEEEEECTTSSEEEEEE---SSSCCEEEECC
T ss_pred hhhhh-hcCccc--CCceEEEEccCCCceEEEEe---cCceEEEEeec
Confidence 12333 332210 0 224567777787665442 67889999986
No 79
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=74.05 E-value=64 Score=30.97 Aligned_cols=154 Identities=9% Similarity=0.022 Sum_probs=74.5
Q ss_pred CCeEEEEEcCCCCeeecCCCCCcceecCCceE-E-C-ceEEEEEeCCCCCCCEEEEEEcCCce-----eEE---EeCCCc
Q 046476 178 TPECEIFTLGTTSWRKIDAPPSRIHFRRQGLC-A-N-GFIHWIITNPRKTKPVLAVFDVKEEK-----FDI---VKLPDE 246 (376)
Q Consensus 178 ~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~-~-~-G~lywl~~~~~~~~~~il~fDl~~e~-----~~~---i~~P~~ 246 (376)
...+.+++..+++-..........+......+ . + |.+|.... .+ .+.|..+|+.++. |.. ++.+..
T Consensus 345 ~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~--~~-d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~ 421 (543)
T 1nir_A 345 SNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSH--LG-DGSISLIGTDPKNHPQYAWKKVAELQGQGG 421 (543)
T ss_dssp GTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEB--SS-SSEEEEEECCTTTCTTTBTSEEEEEECSCS
T ss_pred CCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEecc--CC-CceEEEEEeCCCCCchhcCeEEEEEEcCCC
Confidence 35678888888753221111001121111112 2 3 66544332 12 5789999998732 544 344332
Q ss_pred ccCcceeEec-CCeEEEEEecCCC---CCCeEEEEEEccCCCCCCCceeEEEEEeecc-----cccccCcEeEEEccCCc
Q 046476 247 VRKHHDLIQA-EEKLGVLDCDDFR---SKNKIRVWILKDYGRGGGEVWIRRDYVFRFD-----TIMFRPPIPVSNSNNGE 317 (376)
Q Consensus 247 ~~~~~~L~~~-~g~L~~~~~~~~~---~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~-----~~~~~~~~~v~~~~~g~ 317 (376)
....+... +|+...+...... ...++.||-++.. + . .+.+|+-- .-.-.....+.+..+|+
T Consensus 422 --~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~---~-~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~ 491 (543)
T 1nir_A 422 --GSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNL---D-A----KYQVLPIAEWADLGEGAKRVVQPEYNKRGD 491 (543)
T ss_dssp --CCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCT---T-S----CCEEECHHHHHCCCSSCCEEEEEEECSSSS
T ss_pred --CceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCC---C-C----CeEEeechhhcccCCCCCceEeccCCCCCC
Confidence 11222222 5544344332111 1458899987754 2 1 11212210 00001113457778887
Q ss_pred EEEEe--cccCCCcEEEEEeCCCCcEEEE
Q 046476 318 ILLTE--YKSSLVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 318 il~~~--~~~~~~~~v~~ydl~t~~~~~v 344 (376)
.++.. ..-+.+..|.+||.+|.++.++
T Consensus 492 ~~~~s~~~~~~~~~~i~v~D~~t~~~~~~ 520 (543)
T 1nir_A 492 EVWFSVWNGKNDSSALVVVDDKTLKLKAV 520 (543)
T ss_dssp EEEEEEECCTTSCCEEEEEETTTTEEEEE
T ss_pred EEEEEeecCCCCCCeEEEEECCCceEEEe
Confidence 66543 1112468999999999988765
No 80
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=74.03 E-value=50 Score=29.70 Aligned_cols=198 Identities=11% Similarity=0.071 Sum_probs=98.8
Q ss_pred EEEEEecCcEEEEEecCCcceec-CCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcccce
Q 046476 94 ICFYNIVGFEILMRNVVTQEIID-LPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSYAWM 172 (376)
Q Consensus 94 l~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~ 172 (376)
+++....+..+.|||..+++... +...... .....+.+.|.. .+ ++... .
T Consensus 146 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---------------~~v~~~~~~~~~-~~-l~~~~-~----------- 196 (402)
T 2aq5_A 146 VLLSAGCDNVILVWDVGTGAAVLTLGPDVHP---------------DTIYSVDWSRDG-AL-ICTSC-R----------- 196 (402)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECTTTCC---------------SCEEEEEECTTS-SC-EEEEE-T-----------
T ss_pred EEEEEcCCCEEEEEECCCCCccEEEecCCCC---------------CceEEEEECCCC-CE-EEEEe-c-----------
Confidence 33333356778999998886643 3211111 134455566632 22 22221 1
Q ss_pred ecCCCCCeEEEEEcCCCCeeecC-CCCCcceecCCceE--ECceEEEEEeCCCCCCCEEEEEEcCCcee--EEEeCCCcc
Q 046476 173 IDNHGTPECEIFTLGTTSWRKID-APPSRIHFRRQGLC--ANGFIHWIITNPRKTKPVLAVFDVKEEKF--DIVKLPDEV 247 (376)
Q Consensus 173 ~~~~~~~~~~vys~~t~~Wr~~~-~~~~~~~~~~~~v~--~~G~lywl~~~~~~~~~~il~fDl~~e~~--~~i~~P~~~ 247 (376)
...+.+|+.+++.-.... .... ......+. -+|.+...+.. ...++.|..||+.+.+- .....+...
T Consensus 197 -----d~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~g~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 268 (402)
T 2aq5_A 197 -----DKRVRVIEPRKGTVVAEKDRPHE--GTRPVHAVFVSEGKILTTGFS-RMSERQVALWDTKHLEEPLSLQELDTSS 268 (402)
T ss_dssp -----TSEEEEEETTTTEEEEEEECSSC--SSSCCEEEECSTTEEEEEEEC-TTCCEEEEEEETTBCSSCSEEEECCCCS
T ss_pred -----CCcEEEEeCCCCceeeeeccCCC--CCcceEEEEcCCCcEEEEecc-CCCCceEEEEcCccccCCceEEeccCCC
Confidence 356788888775432211 1100 00011111 25665555421 11267899999987432 233332221
Q ss_pred cCcceeE-ecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccC
Q 046476 248 RKHHDLI-QAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSS 326 (376)
Q Consensus 248 ~~~~~L~-~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~ 326 (376)
....+. .-+|...++... ....+.||-++.. ..+.....-+.. . .....+++.+++.+++.
T Consensus 269 -~v~~~~~s~~~~~l~~~g~---~dg~i~i~d~~~~-----~~~~~~l~~~~~-~---~~v~~~~~sp~~~~~~s----- 330 (402)
T 2aq5_A 269 -GVLLPFFDPDTNIVYLCGK---GDSSIRYFEITSE-----APFLHYLSMFSS-K---ESQRGMGYMPKRGLEVN----- 330 (402)
T ss_dssp -SCEEEEEETTTTEEEEEET---TCSCEEEEEECSS-----TTCEEEEEEECC-S---SCCSEEEECCGGGSCGG-----
T ss_pred -ceeEEEEcCCCCEEEEEEc---CCCeEEEEEecCC-----CcceEeeccccc-C---CcccceEEeccccccee-----
Confidence 112222 225554443332 2678999998753 222322221221 1 12245677777776553
Q ss_pred CCcEEEEEeCCCCcEEEEEE
Q 046476 327 LVSRVFIYDLKTQERRAIKI 346 (376)
Q Consensus 327 ~~~~v~~ydl~t~~~~~v~~ 346 (376)
.+..+.+|++.+++.+.+.+
T Consensus 331 ~~~~~~~~~l~~~~~~~i~~ 350 (402)
T 2aq5_A 331 KCEIARFYKLHERKCEPIAM 350 (402)
T ss_dssp GTEEEEEEEEETTEEEEEEE
T ss_pred cceeEEEEEcCCCcEEEEEE
Confidence 35688999999998887765
No 81
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=73.50 E-value=6.5 Score=35.26 Aligned_cols=140 Identities=9% Similarity=0.065 Sum_probs=66.4
Q ss_pred CCeEEEEEcCCCCeeecCCCCCccee-cCCceEE--CceEEEEEeCCCCCCCEEEEEEcCCce-eEEE-eCCCcccCcce
Q 046476 178 TPECEIFTLGTTSWRKIDAPPSRIHF-RRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKEEK-FDIV-KLPDEVRKHHD 252 (376)
Q Consensus 178 ~~~~~vys~~t~~Wr~~~~~~~~~~~-~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~-~~~i-~~P~~~~~~~~ 252 (376)
...+.+|+..++.|+....... +. .-.++.+ +|.....+. .++.|..||+.+.+ +... .+......-..
T Consensus 32 d~~i~iw~~~~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~s----~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~ 105 (377)
T 3dwl_C 32 TNQVELYEQDGNGWKHARTFSD--HDKIVTCVDWAPKSNRIVTCS----QDRNAYVYEKRPDGTWKQTLVLLRLNRAATF 105 (377)
T ss_dssp SSCBCEEEEETTEEEECCCBCC--CSSCEEEEEECTTTCCEEEEE----TTSSEEEC------CCCCEEECCCCSSCEEE
T ss_pred CCEEEEEEccCCceEEEEEEec--CCceEEEEEEeCCCCEEEEEe----CCCeEEEEEcCCCCceeeeeEecccCCceEE
Confidence 3566788888877766544321 11 1111111 344333333 15679999998876 3322 12111111112
Q ss_pred eEec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeec-ccccccCcEeEEEccCCcEEEEecccCCCcE
Q 046476 253 LIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRF-DTIMFRPPIPVSNSNNGEILLTEYKSSLVSR 330 (376)
Q Consensus 253 L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~-~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~ 330 (376)
+.-. +|.+.++... ...+.||-++.. ..|..... +.. +.. ....+++.+++..++... .++.
T Consensus 106 ~~~~~~~~~l~~~~~----d~~i~iwd~~~~-----~~~~~~~~-~~~~h~~---~v~~~~~~~~~~~l~~~~---~d~~ 169 (377)
T 3dwl_C 106 VRWSPNEDKFAVGSG----ARVISVCYFEQE-----NDWWVSKH-LKRPLRS---TILSLDWHPNNVLLAAGC---ADRK 169 (377)
T ss_dssp EECCTTSSCCEEEES----SSCEEECCC----------CCCCEE-ECSSCCS---CEEEEEECTTSSEEEEEE---SSSC
T ss_pred EEECCCCCEEEEEec----CCeEEEEEECCc-----ccceeeeE-eecccCC---CeEEEEEcCCCCEEEEEe---CCCE
Confidence 2222 4554444443 678999987753 34655555 443 222 234567777777666541 6788
Q ss_pred EEEEeCCCC
Q 046476 331 VFIYDLKTQ 339 (376)
Q Consensus 331 v~~ydl~t~ 339 (376)
+.+||++++
T Consensus 170 i~iwd~~~~ 178 (377)
T 3dwl_C 170 AYVLSAYVR 178 (377)
T ss_dssp EEEEEECCS
T ss_pred EEEEEEEec
Confidence 999998643
No 82
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=72.26 E-value=44 Score=28.24 Aligned_cols=197 Identities=11% Similarity=0.084 Sum_probs=101.9
Q ss_pred ecccccceEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCC
Q 046476 86 VTQLINGFICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTN 165 (376)
Q Consensus 86 ~~~s~nGLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~ 165 (376)
+....+|-+.+.......+.++||. ++...++.+.. . ....++..|+... +... ...
T Consensus 25 i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~-~--------------~~~~~i~~~~~g~---l~v~-~~~--- 81 (300)
T 2qc5_A 25 ITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTP-D--------------AKVMCLIVSSLGD---IWFT-ENG--- 81 (300)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSST-T--------------CCEEEEEECTTSC---EEEE-ETT---
T ss_pred eeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCC-C--------------CcceeEEECCCCC---EEEE-ecC---
Confidence 4444567666664345788999998 76665433211 1 1344555665332 2221 110
Q ss_pred CCcccceecCCCCCeEEEEEcCCCCeeecCCCCCcceecCCceEE--CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeC
Q 046476 166 SSSYAWMIDNHGTPECEIFTLGTTSWRKIDAPPSRIHFRRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKL 243 (376)
Q Consensus 166 ~~~~~~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~ 243 (376)
...+..|+.. +.++........ ....++.+ +|.+|+... . ...|..+|.. .++..+.+
T Consensus 82 ------------~~~v~~~d~~-g~~~~~~~~~~~--~~~~~i~~~~~g~l~v~~~---~-~~~i~~~~~~-g~~~~~~~ 141 (300)
T 2qc5_A 82 ------------ANKIGKLSKK-GGFTEYPLPQPD--SGPYGITEGLNGDIWFTQL---N-GDRIGKLTAD-GTIYEYDL 141 (300)
T ss_dssp ------------TTEEEEECTT-SCEEEEECSSTT--CCEEEEEECSTTCEEEEET---T-TTEEEEECTT-SCEEEEEC
T ss_pred ------------CCeEEEECCC-CCeEEecCCCCC--CCCccceECCCCCEEEEcc---C-CCeEEEECCC-CCEEEccC
Confidence 2456666666 555443221100 11123333 577766543 1 5689999998 77777766
Q ss_pred CCcccCcceeEe-cCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEe
Q 046476 244 PDEVRKHHDLIQ-AEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTE 322 (376)
Q Consensus 244 P~~~~~~~~L~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~ 322 (376)
|........+.. -+|+|++.... .. .|++++.. ..... .. ++. .. ....-+++..+|.+++..
T Consensus 142 ~~~~~~~~~i~~d~~g~l~v~~~~----~~--~i~~~~~~-----g~~~~-~~-~~~-~~--~~~~~i~~d~~g~l~v~~ 205 (300)
T 2qc5_A 142 PNKGSYPAFITLGSDNALWFTENQ----NN--SIGRITNT-----GKLEE-YP-LPT-NA--AAPVGITSGNDGALWFVE 205 (300)
T ss_dssp SSTTCCEEEEEECTTSSEEEEETT----TT--EEEEECTT-----CCEEE-EE-CSS-TT--CCEEEEEECTTSSEEEEE
T ss_pred CCCCCCceeEEECCCCCEEEEecC----CC--eEEEECCC-----CcEEE-ee-CCC-CC--CCcceEEECCCCCEEEEc
Confidence 643222233433 36788776643 23 35555542 22322 22 221 11 111345666678888876
Q ss_pred cccCCCcEEEEEeCCCCcEEEEE
Q 046476 323 YKSSLVSRVFIYDLKTQERRAIK 345 (376)
Q Consensus 323 ~~~~~~~~v~~ydl~t~~~~~v~ 345 (376)
. ....+..||+ ++++..+.
T Consensus 206 ~---~~~~i~~~~~-~g~~~~~~ 224 (300)
T 2qc5_A 206 I---MGNKIGRITT-TGEISEYD 224 (300)
T ss_dssp T---TTTEEEEECT-TCCEEEEE
T ss_pred c---CCCEEEEEcC-CCcEEEEE
Confidence 2 3567999998 55655543
No 83
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=72.06 E-value=56 Score=29.38 Aligned_cols=207 Identities=9% Similarity=0.064 Sum_probs=103.0
Q ss_pred cceEEEEEecCcEEEEEecCCcceecCC-CCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcc
Q 046476 91 NGFICFYNIVGFEILMRNVVTQEIIDLP-KSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSY 169 (376)
Q Consensus 91 nGLl~~~~~~~~~~~V~NP~T~~~~~LP-~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~ 169 (376)
+|-+++....+..+.|||..+++...-. .+.... .+.. .....+.+.|....+ ++....
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~----~~h~------~~v~~~~~~p~~~~~-l~s~~~--------- 152 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITL----EGHT------KRVGIVAWHPTAQNV-LLSAGC--------- 152 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEE----ECCS------SCEEEEEECSSBTTE-EEEEET---------
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEe----cCCC------CeEEEEEECcCCCCE-EEEEcC---------
Confidence 4544444336778999999887543211 110000 0111 134455566654332 222211
Q ss_pred cceecCCCCCeEEEEEcCCCCeeecC--CCCCcceecCCceEE--CceEEEEEeCCCCCCCEEEEEEcCCceeEEEe-CC
Q 046476 170 AWMIDNHGTPECEIFTLGTTSWRKID--APPSRIHFRRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVK-LP 244 (376)
Q Consensus 170 ~~~~~~~~~~~~~vys~~t~~Wr~~~--~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~-~P 244 (376)
...+.+|+..++.....- ..... .-.++.+ +|.....+. .++.|..||+.+.+....- ..
T Consensus 153 --------dg~i~iwd~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~----~d~~i~iwd~~~~~~~~~~~~~ 217 (402)
T 2aq5_A 153 --------DNVILVWDVGTGAAVLTLGPDVHPD---TIYSVDWSRDGALICTSC----RDKRVRVIEPRKGTVVAEKDRP 217 (402)
T ss_dssp --------TSCEEEEETTTTEEEEEECTTTCCS---CEEEEEECTTSSCEEEEE----TTSEEEEEETTTTEEEEEEECS
T ss_pred --------CCEEEEEECCCCCccEEEecCCCCC---ceEEEEECCCCCEEEEEe----cCCcEEEEeCCCCceeeeeccC
Confidence 356788888876543322 11100 1111222 455444443 1678999999987654332 22
Q ss_pred CcccCcceeEe-cCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEec
Q 046476 245 DEVRKHHDLIQ-AEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEY 323 (376)
Q Consensus 245 ~~~~~~~~L~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~ 323 (376)
........+.- -+|.+.++... ......+.||-++.. .. =..... ++... ....+++..++..++...
T Consensus 218 ~~~~~~~~~~~~~~~~~l~~g~~-~~~d~~i~iwd~~~~---~~--~~~~~~-~~~~~----~v~~~~~s~~~~~l~~~g 286 (402)
T 2aq5_A 218 HEGTRPVHAVFVSEGKILTTGFS-RMSERQVALWDTKHL---EE--PLSLQE-LDTSS----GVLLPFFDPDTNIVYLCG 286 (402)
T ss_dssp SCSSSCCEEEECSTTEEEEEEEC-TTCCEEEEEEETTBC---SS--CSEEEE-CCCCS----SCEEEEEETTTTEEEEEE
T ss_pred CCCCcceEEEEcCCCcEEEEecc-CCCCceEEEEcCccc---cC--CceEEe-ccCCC----ceeEEEEcCCCCEEEEEE
Confidence 21111222332 36776555531 113678999987753 11 112222 22211 224456677887775431
Q ss_pred ccCCCcEEEEEeCCCCc--EEEEE
Q 046476 324 KSSLVSRVFIYDLKTQE--RRAIK 345 (376)
Q Consensus 324 ~~~~~~~v~~ydl~t~~--~~~v~ 345 (376)
..++.+.+||+++++ ++.+.
T Consensus 287 --~~dg~i~i~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 287 --KGDSSIRYFEITSEAPFLHYLS 308 (402)
T ss_dssp --TTCSCEEEEEECSSTTCEEEEE
T ss_pred --cCCCeEEEEEecCCCcceEeec
Confidence 147889999999887 65554
No 84
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=71.94 E-value=56 Score=29.31 Aligned_cols=102 Identities=13% Similarity=0.108 Sum_probs=59.4
Q ss_pred CCEEEEEEcCCceeEEEe---CCCcc-cCcceeE--ecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEee
Q 046476 225 KPVLAVFDVKEEKFDIVK---LPDEV-RKHHDLI--QAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFR 298 (376)
Q Consensus 225 ~~~il~fDl~~e~~~~i~---~P~~~-~~~~~L~--~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~ 298 (376)
++.|..||+.+.+....- .|... .....+. ..++.+.+.... ...+.||-+...+ . .... +.
T Consensus 179 D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~----D~~v~~wd~~~~~---~----~~~~-~~ 246 (380)
T 3iz6_a 179 DQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSC----DTTVRLWDLRITS---R----AVRT-YH 246 (380)
T ss_dssp TSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEET----TSCEEEEETTTTC---C----CCEE-EC
T ss_pred CCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEEC----CCeEEEEECCCCC---c----ceEE-EC
Confidence 678999999987654332 22221 1112222 225666666554 7889999876431 1 1122 33
Q ss_pred cccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEEEE
Q 046476 299 FDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 299 ~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~~v 344 (376)
.+.. ....+++.+++..++.. +.++.+.+||+++++...+
T Consensus 247 ~h~~---~v~~v~~~p~~~~l~s~---s~D~~i~lwd~~~~~~~~~ 286 (380)
T 3iz6_a 247 GHEG---DINSVKFFPDGQRFGTG---SDDGTCRLFDMRTGHQLQV 286 (380)
T ss_dssp CCSS---CCCEEEECTTSSEEEEE---CSSSCEEEEETTTTEEEEE
T ss_pred CcCC---CeEEEEEecCCCeEEEE---cCCCeEEEEECCCCcEEEE
Confidence 2221 23456777788877665 3678899999998765443
No 85
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=71.82 E-value=50 Score=28.69 Aligned_cols=119 Identities=9% Similarity=0.073 Sum_probs=62.7
Q ss_pred CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcccCcceeEe-cCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCc
Q 046476 211 NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQ-AEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEV 289 (376)
Q Consensus 211 ~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~ 289 (376)
+|.+||.... ...|..||+++.++..+..+.. .....+.. -+|+|.+...... ...-.|++++..+ ..
T Consensus 55 ~g~l~~~~~~----~~~i~~~d~~~~~~~~~~~~~~-~~~~~i~~~~dg~l~v~~~~~~--~~~~~i~~~d~~~----~~ 123 (333)
T 2dg1_A 55 QGQLFLLDVF----EGNIFKINPETKEIKRPFVSHK-ANPAAIKIHKDGRLFVCYLGDF--KSTGGIFAATENG----DN 123 (333)
T ss_dssp TSCEEEEETT----TCEEEEECTTTCCEEEEEECSS-SSEEEEEECTTSCEEEEECTTS--SSCCEEEEECTTS----CS
T ss_pred CCCEEEEECC----CCEEEEEeCCCCcEEEEeeCCC-CCcceEEECCCCcEEEEeCCCC--CCCceEEEEeCCC----CE
Confidence 6888877641 5689999999888876542211 11223443 3778877764310 1112455555321 11
Q ss_pred eeEEEEEeecccccccCcEeEEEccCCcEEEEeccc---CCCcEEEEEeCCCCcEEEE
Q 046476 290 WIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKS---SLVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 290 W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~---~~~~~v~~ydl~t~~~~~v 344 (376)
-... +..... -.....+++..+|.+++..... .....|+.+|+++++++.+
T Consensus 124 ~~~~---~~~~~~-~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 124 LQDI---IEDLST-AYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp CEEE---ECSSSS-CCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred EEEE---EccCcc-CCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 1111 121110 0112345667788888876210 0136789999888776654
No 86
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=71.47 E-value=49 Score=28.47 Aligned_cols=145 Identities=11% Similarity=0.025 Sum_probs=72.1
Q ss_pred CCeEEEEEcCCC--CeeecCCCCCcceecCCceEECceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcccCccee-E
Q 046476 178 TPECEIFTLGTT--SWRKIDAPPSRIHFRRQGLCANGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEVRKHHDL-I 254 (376)
Q Consensus 178 ~~~~~vys~~t~--~Wr~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~~~~~~L-~ 254 (376)
...+.+++..|+ .|+.........+ ...+.-||.++. +. ...+.+||...+.--.+..|.... .... .
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~~~~~--~~~~~pdG~ilv-s~-----~~~V~~~d~~G~~~W~~~~~~~~~-~~~~~~ 84 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKGWECN--SVAATKAGEILF-SY-----SKGAKMITRDGRELWNIAAPAGCE-MQTARI 84 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTTCCCC--EEEECTTSCEEE-EC-----BSEEEEECTTSCEEEEEECCTTCE-EEEEEE
T ss_pred CCEEEEEECCCCeEEEEeCCCccCCCc--CeEECCCCCEEE-eC-----CCCEEEECCCCCEEEEEcCCCCcc-ccccEE
Confidence 567778888776 4776543210011 112223787766 44 567999999544334455553211 1112 2
Q ss_pred ecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecc-cccccCcEeEEEccCCcEEEEecccCCCcEEEE
Q 046476 255 QAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFD-TIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFI 333 (376)
Q Consensus 255 ~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~-~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ 333 (376)
.-+|.+.++... ..-.|+.++..| +..|.... ... ........-+....+|++++... .+..|+.
T Consensus 85 ~~dG~~lv~~~~-----~~~~v~~vd~~G---k~l~~~~~---~~~~~~~~~~~~~v~~~~~G~~lv~~~---~~~~v~~ 150 (276)
T 3no2_A 85 LPDGNALVAWCG-----HPSTILEVNMKG---EVLSKTEF---ETGIERPHAQFRQINKNKKGNYLVPLF---ATSEVRE 150 (276)
T ss_dssp CTTSCEEEEEES-----TTEEEEEECTTS---CEEEEEEE---CCSCSSGGGSCSCCEECTTSCEEEEET---TTTEEEE
T ss_pred CCCCCEEEEecC-----CCCEEEEEeCCC---CEEEEEec---cCCCCcccccccCceECCCCCEEEEec---CCCEEEE
Confidence 236777665432 133566666542 44454432 211 00001112234455677766552 5677888
Q ss_pred EeCCCCcEEEEE
Q 046476 334 YDLKTQERRAIK 345 (376)
Q Consensus 334 ydl~t~~~~~v~ 345 (376)
||++.+.+.+..
T Consensus 151 ~d~~G~~~w~~~ 162 (276)
T 3no2_A 151 IAPNGQLLNSVK 162 (276)
T ss_dssp ECTTSCEEEEEE
T ss_pred ECCCCCEEEEEE
Confidence 888755444443
No 87
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=71.36 E-value=52 Score=28.77 Aligned_cols=139 Identities=12% Similarity=0.093 Sum_probs=73.5
Q ss_pred CCeEEEEEcCCCCeeecCCCCCccee-cCCce--EECceEEEEEeCCCCCCCEEEEEEcCCceeEEE-eCCCcccCccee
Q 046476 178 TPECEIFTLGTTSWRKIDAPPSRIHF-RRQGL--CANGFIHWIITNPRKTKPVLAVFDVKEEKFDIV-KLPDEVRKHHDL 253 (376)
Q Consensus 178 ~~~~~vys~~t~~Wr~~~~~~~~~~~-~~~~v--~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i-~~P~~~~~~~~L 253 (376)
...+.+|+..++.|+.+..... +. .-.++ .-+|.....+. .++.|..||+++.++... .+.........+
T Consensus 29 d~~v~i~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~~~~----~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~ 102 (372)
T 1k8k_C 29 NHEVHIYEKSGNKWVQVHELKE--HNGQVTGVDWAPDSNRIVTCG----TDRNAYVWTLKGRTWKPTLVILRINRAARCV 102 (372)
T ss_dssp SSEEEEEEEETTEEEEEEEEEC--CSSCEEEEEEETTTTEEEEEE----TTSCEEEEEEETTEEEEEEECCCCSSCEEEE
T ss_pred CCEEEEEeCCCCcEEeeeeecC--CCCcccEEEEeCCCCEEEEEc----CCCeEEEEECCCCeeeeeEEeecCCCceeEE
Confidence 4578888888876554322210 10 00111 11454444443 167799999988876543 222221111222
Q ss_pred Eec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEE
Q 046476 254 IQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVF 332 (376)
Q Consensus 254 ~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~ 332 (376)
.-. +|.+.++... ...+.||-++.. ..|.....+...+.. ....+++..++..++... .++.+.
T Consensus 103 ~~~~~~~~l~~~~~----d~~v~i~d~~~~-----~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~---~dg~i~ 167 (372)
T 1k8k_C 103 RWAPNEKKFAVGSG----SRVISICYFEQE-----NDWWVCKHIKKPIRS---TVLSLDWHPNSVLLAAGS---CDFKCR 167 (372)
T ss_dssp EECTTSSEEEEEET----TSSEEEEEEETT-----TTEEEEEEECTTCCS---CEEEEEECTTSSEEEEEE---TTSCEE
T ss_pred EECCCCCEEEEEeC----CCEEEEEEecCC-----CcceeeeeeecccCC---CeeEEEEcCCCCEEEEEc---CCCCEE
Confidence 222 5555455443 678999998853 345444441222221 224566677777665542 678899
Q ss_pred EEeCC
Q 046476 333 IYDLK 337 (376)
Q Consensus 333 ~ydl~ 337 (376)
+||++
T Consensus 168 ~~d~~ 172 (372)
T 1k8k_C 168 IFSAY 172 (372)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 99964
No 88
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=71.21 E-value=57 Score=29.16 Aligned_cols=112 Identities=15% Similarity=0.176 Sum_probs=61.1
Q ss_pred ECceEEEEEeCCCCCCCEEEEEEcCCceeEEEe---CCCcccCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCCC
Q 046476 210 ANGFIHWIITNPRKTKPVLAVFDVKEEKFDIVK---LPDEVRKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRG 285 (376)
Q Consensus 210 ~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~---~P~~~~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g 285 (376)
-+|.....+.........+..+|+......... +......-..+... +|++.+.... ...+.||-++..
T Consensus 229 pdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~----D~~V~iwd~~~~--- 301 (365)
T 4h5i_A 229 ADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASN----DNSIALVKLKDL--- 301 (365)
T ss_dssp ETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEET----TSCEEEEETTTT---
T ss_pred CCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcC----CCEEEEEECCCC---
Confidence 356555554421111235677777766554332 11111111223222 6776555544 678999976532
Q ss_pred CCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCC
Q 046476 286 GGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQ 339 (376)
Q Consensus 286 ~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~ 339 (376)
..+.+++..+.. ....+++.+||..|... +.++.|-+||+.++
T Consensus 302 -----~~~~~~~~gH~~---~V~~v~fSpdg~~laS~---S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 302 -----SMSKIFKQAHSF---AITEVTISPDSTYVASV---SAANTIHIIKLPLN 344 (365)
T ss_dssp -----EEEEEETTSSSS---CEEEEEECTTSCEEEEE---ETTSEEEEEECCTT
T ss_pred -----cEEEEecCcccC---CEEEEEECCCCCEEEEE---eCCCeEEEEEcCCC
Confidence 233441222222 33567888999988776 37889999998654
No 89
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=70.68 E-value=88 Score=31.11 Aligned_cols=99 Identities=8% Similarity=0.015 Sum_probs=54.6
Q ss_pred CCEEEEEEcCCceeEE-EeCCCcccCcceeEec---CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecc
Q 046476 225 KPVLAVFDVKEEKFDI-VKLPDEVRKHHDLIQA---EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFD 300 (376)
Q Consensus 225 ~~~il~fDl~~e~~~~-i~~P~~~~~~~~L~~~---~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~ 300 (376)
++.|..||+.+.+... +..+... ....+.-. +|.+.++... ...+.+|-++.. ..... +..+
T Consensus 162 dg~v~vwd~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~l~~~~~----dg~i~~~d~~~~--------~~~~~-~~~~ 227 (814)
T 3mkq_A 162 DRTVKVWSLGQSTPNFTLTTGQER-GVNYVDYYPLPDKPYMITASD----DLTIKIWDYQTK--------SCVAT-LEGH 227 (814)
T ss_dssp TSEEEEEETTCSSCSEEEECCCTT-CCCEEEECCSTTCCEEEEECT----TSEEEEEETTTT--------EEEEE-EECC
T ss_pred CCeEEEEECCCCcceeEEecCCCC-CEEEEEEEECCCCCEEEEEeC----CCEEEEEECCCC--------cEEEE-EcCC
Confidence 6789999997654322 2222211 11122221 5665555544 678999976532 12333 3322
Q ss_pred cccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEEE
Q 046476 301 TIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERRA 343 (376)
Q Consensus 301 ~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~~ 343 (376)
.. ....+++.+++.+++... .++.+.+||+.+.+...
T Consensus 228 ~~---~v~~~~~~~~~~~l~~~~---~dg~v~vwd~~~~~~~~ 264 (814)
T 3mkq_A 228 MS---NVSFAVFHPTLPIIISGS---EDGTLKIWNSSTYKVEK 264 (814)
T ss_dssp SS---CEEEEEECSSSSEEEEEE---TTSCEEEEETTTCSEEE
T ss_pred CC---CEEEEEEcCCCCEEEEEe---CCCeEEEEECCCCcEEE
Confidence 21 224556677777666551 57889999998866543
No 90
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=70.44 E-value=51 Score=28.28 Aligned_cols=58 Identities=10% Similarity=0.122 Sum_probs=36.6
Q ss_pred CCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCC---cEEEEecccCCCcEEEEEeCCCC
Q 046476 271 KNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNG---EILLTEYKSSLVSRVFIYDLKTQ 339 (376)
Q Consensus 271 ~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g---~il~~~~~~~~~~~v~~ydl~t~ 339 (376)
...+.||-++.. +..|..... +..+.- ....+++.+++ ..+... +.++.+.+||+++.
T Consensus 179 D~~v~lwd~~~~----~~~~~~~~~-l~~H~~---~V~~v~~sp~~~~~~~las~---s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 179 DNLVKIWKYNSD----AQTYVLEST-LEGHSD---WVRDVAWSPTVLLRSYMASV---SQDRTCIIWTQDNE 239 (297)
T ss_dssp TSCEEEEEEETT----TTEEEEEEE-ECCCSS---CEEEEEECCCCSSSEEEEEE---ETTSCEEEEEESST
T ss_pred CCcEEEEEEcCC----CceEEEEEE-ecCCCC---ceEEEEECCCCCCceEEEEE---ECCCcEEEEEeCCC
Confidence 678999988753 456766666 554332 22456666653 555443 26778889988764
No 91
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=70.03 E-value=59 Score=28.80 Aligned_cols=98 Identities=7% Similarity=-0.035 Sum_probs=51.9
Q ss_pred CCEEEEEEcCCceeEEEeCCCc----c-cCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEee
Q 046476 225 KPVLAVFDVKEEKFDIVKLPDE----V-RKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFR 298 (376)
Q Consensus 225 ~~~il~fDl~~e~~~~i~~P~~----~-~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~ 298 (376)
++.|..||+.+.+-........ . ......... .+.+.+.. . ...+.||-+... ..+.. +.
T Consensus 266 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~i~v~d~~~~--------~~~~~-~~ 331 (408)
T 4a11_B 266 DNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVP-Y----GSTIAVYTVYSG--------EQITM-LK 331 (408)
T ss_dssp TSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEE-E----TTEEEEEETTTC--------CEEEE-EC
T ss_pred CCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEe-c----CCEEEEEECcCC--------cceee-ec
Confidence 6779999998865432211110 0 111111112 33444443 3 578889976542 23344 33
Q ss_pred cccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEE
Q 046476 299 FDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERR 342 (376)
Q Consensus 299 ~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~ 342 (376)
.+.- ....+++..++..++.. +.++.+.+||+++.+..
T Consensus 332 ~~~~---~v~~~~~s~~~~~l~s~---~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 332 GHYK---TVDCCVFQSNFQELYSG---SRDCNILAWVPSLYEPV 369 (408)
T ss_dssp CCSS---CEEEEEEETTTTEEEEE---ETTSCEEEEEECC----
T ss_pred cCCC---eEEEEEEcCCCCEEEEE---CCCCeEEEEeCCCCCcc
Confidence 3221 22456777788877655 26889999999987653
No 92
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=69.68 E-value=41 Score=33.51 Aligned_cols=123 Identities=15% Similarity=0.157 Sum_probs=67.3
Q ss_pred cCCceEECceEEEEEeCCCCCCCEEEEEEcCCc--eeEEEe-CCCcc-------cCcceeEecCCeEEEEEecCCCCCCe
Q 046476 204 RRQGLCANGFIHWIITNPRKTKPVLAVFDVKEE--KFDIVK-LPDEV-------RKHHDLIQAEEKLGVLDCDDFRSKNK 273 (376)
Q Consensus 204 ~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e--~~~~i~-~P~~~-------~~~~~L~~~~g~L~~~~~~~~~~~~~ 273 (376)
...++..+|.+|..+. .+.|.++|..+. .|+.-. .+... .....+...+|+|++...+ .
T Consensus 70 ~~~P~v~~g~vyv~~~-----~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d-----g- 138 (677)
T 1kb0_A 70 EATPVVVDGIMYVSAS-----WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD-----G- 138 (677)
T ss_dssp CCCCEEETTEEEEECG-----GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT-----S-
T ss_pred eeCCEEECCEEEEECC-----CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC-----C-
Confidence 3557889999999876 678999998775 454321 11110 0123345567777766433 2
Q ss_pred EEEEEEccCCCCCCCceeEEEEEee-ccccccc-CcEeEEEccCCcEEEEeccc--CCCcEEEEEeCCCCcEEEEE
Q 046476 274 IRVWILKDYGRGGGEVWIRRDYVFR-FDTIMFR-PPIPVSNSNNGEILLTEYKS--SLVSRVFIYDLKTQERRAIK 345 (376)
Q Consensus 274 ~~IW~l~~~~~g~~~~W~~~~~ii~-~~~~~~~-~~~~v~~~~~g~il~~~~~~--~~~~~v~~ydl~t~~~~~v~ 345 (376)
.|..|+-.. .+..|... .+ ....... ...|+. .++.+++..... ..++.|++||.+|++..+-.
T Consensus 139 -~l~alD~~t--G~~~W~~~---~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 139 -RLIALDAAT--GKEVWHQN---TFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp -EEEEEETTT--CCEEEEEE---TTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred -EEEEEECCC--CCEEeeec---CCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 355555321 25678764 22 1000000 113332 246666544110 02578999999999877543
No 93
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=68.52 E-value=64 Score=28.67 Aligned_cols=98 Identities=15% Similarity=0.165 Sum_probs=52.6
Q ss_pred CCEEEEEEcCCceeEE-EeCCCcccCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccc
Q 046476 225 KPVLAVFDVKEEKFDI-VKLPDEVRKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTI 302 (376)
Q Consensus 225 ~~~il~fDl~~e~~~~-i~~P~~~~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~ 302 (376)
.+.|..||+.+.+... +..... ....+.-. +|.+.++... ...+.||-++.. + .... +..+..
T Consensus 226 ~g~i~~~d~~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~----d~~i~i~d~~~~----~----~~~~-~~~~~~ 290 (425)
T 1r5m_A 226 KGAIFVYQITEKTPTGKLIGHHG--PISVLEFNDTNKLLLSASD----DGTLRIWHGGNG----N----SQNC-FYGHSQ 290 (425)
T ss_dssp GGCEEEEETTCSSCSEEECCCSS--CEEEEEEETTTTEEEEEET----TSCEEEECSSSB----S----CSEE-ECCCSS
T ss_pred CCeEEEEEcCCCceeeeeccCCC--ceEEEEECCCCCEEEEEcC----CCEEEEEECCCC----c----cceE-ecCCCc
Confidence 6789999998864432 222211 11222222 5554444443 678899976542 1 1222 222221
Q ss_pred cccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEEEE
Q 046476 303 MFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 303 ~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~~v 344 (376)
....+++..++.++... .++.+.+||+++.+....
T Consensus 291 ---~i~~~~~~~~~~l~~~~----~d~~i~i~d~~~~~~~~~ 325 (425)
T 1r5m_A 291 ---SIVSASWVGDDKVISCS----MDGSVRLWSLKQNTLLAL 325 (425)
T ss_dssp ---CEEEEEEETTTEEEEEE----TTSEEEEEETTTTEEEEE
T ss_pred ---cEEEEEECCCCEEEEEe----CCCcEEEEECCCCcEeEe
Confidence 22445666667333333 688999999988765543
No 94
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=68.48 E-value=39 Score=33.58 Aligned_cols=122 Identities=15% Similarity=0.142 Sum_probs=67.8
Q ss_pred cCCceEECceEEEEEeCCCCCCCEEEEEEcCC--ceeEEE-eCCCcc-------cCcceeEecCCeEEEEEecCCCCCCe
Q 046476 204 RRQGLCANGFIHWIITNPRKTKPVLAVFDVKE--EKFDIV-KLPDEV-------RKHHDLIQAEEKLGVLDCDDFRSKNK 273 (376)
Q Consensus 204 ~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~--e~~~~i-~~P~~~-------~~~~~L~~~~g~L~~~~~~~~~~~~~ 273 (376)
...++..+|.+|..+. .+.+.++|..+ +.|+.- ..+... .....+...+|+|++...+ .
T Consensus 59 ~~~P~v~~g~vyv~~~-----~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d-----g- 127 (668)
T 1kv9_A 59 EATPLFHDGVIYTSMS-----WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD-----G- 127 (668)
T ss_dssp CCCCEEETTEEEEEEG-----GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT-----S-
T ss_pred ccCCEEECCEEEEECC-----CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC-----C-
Confidence 3567889999999887 77899999876 456542 122111 0112345567777665432 2
Q ss_pred EEEEEEccCCCCCCCceeEEEEEeeccccccc-CcEeEEEccCCcEEEEecc--cCCCcEEEEEeCCCCcEEEE
Q 046476 274 IRVWILKDYGRGGGEVWIRRDYVFRFDTIMFR-PPIPVSNSNNGEILLTEYK--SSLVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 274 ~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~-~~~~v~~~~~g~il~~~~~--~~~~~~v~~ydl~t~~~~~v 344 (376)
.|..|+-.. .+..|..... +.... .. ...|+. .++.+++.... ...++.|+.+|++|.+..+-
T Consensus 128 -~l~alD~~t--G~~~W~~~~~--~~~~~-~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 128 -RLIALDAKT--GKAIWSQQTT--DPAKP-YSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp -EEEEEETTT--CCEEEEEECS--CTTSS-CBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred -EEEEEECCC--CCEeeeeccC--CCCCc-ceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 355565321 3677876422 11110 01 113432 25666654311 01247899999999987764
No 95
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=68.33 E-value=72 Score=29.15 Aligned_cols=29 Identities=14% Similarity=0.276 Sum_probs=19.1
Q ss_pred EEccCCcEEEEecccCCCcEEEEEeCCCCcEEE
Q 046476 311 SNSNNGEILLTEYKSSLVSRVFIYDLKTQERRA 343 (376)
Q Consensus 311 ~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~~ 343 (376)
++.++|.+|... .++.|.+||+++.+.++
T Consensus 407 ~fspdg~~lasg----~d~~i~iW~~~~gk~rK 435 (435)
T 4e54_B 407 EFNPMGDTLASA----MGYHILIWSQQEARTRK 435 (435)
T ss_dssp EECTTSSCEEEE----CSSEEEECCCC------
T ss_pred EECCCCCEEEEE----cCCcEEEEECCcCeeeC
Confidence 567789888766 67789999999887653
No 96
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=68.20 E-value=72 Score=29.14 Aligned_cols=188 Identities=9% Similarity=0.085 Sum_probs=93.2
Q ss_pred cEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcccceecCCCCCeE
Q 046476 102 FEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSYAWMIDNHGTPEC 181 (376)
Q Consensus 102 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (376)
..++++|..|++.+.+..... ....+.+.|.. .+ ++..... .....+
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~-----------------~~~~~~~spdg-~~-la~~~~~--------------~g~~~i 249 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR-----------------HNGAPAFSPDG-SK-LAFALSK--------------TGSLNL 249 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS-----------------CEEEEEECTTS-SE-EEEEECT--------------TSSCEE
T ss_pred cEEEEEECCCCcEEEeecCCC-----------------cccCEEEcCCC-CE-EEEEEec--------------CCCceE
Confidence 488999999998776543221 23344455542 22 2222221 114578
Q ss_pred EEEEcCCCCeeecCCCCCcceecCCceEECce-EEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcccCcceeEe-cCCe
Q 046476 182 EIFTLGTTSWRKIDAPPSRIHFRRQGLCANGF-IHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQ-AEEK 259 (376)
Q Consensus 182 ~vys~~t~~Wr~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~-~~g~ 259 (376)
.+++..++..+.+....... ......-||. +++.+. .+....|..+|+.+.+...+..... ....+.- -+|+
T Consensus 250 ~~~d~~~~~~~~l~~~~~~~--~~~~~spdg~~l~~~s~--~~g~~~i~~~d~~~~~~~~l~~~~~--~~~~~~~spdG~ 323 (415)
T 2hqs_A 250 YVMDLASGQIRQVTDGRSNN--TEPTWFPDSQNLAFTSD--QAGRPQVYKVNINGGAPQRITWEGS--QNQDADVSSDGK 323 (415)
T ss_dssp EEEETTTCCEEECCCCSSCE--EEEEECTTSSEEEEEEC--TTSSCEEEEEETTSSCCEECCCSSS--EEEEEEECTTSS
T ss_pred EEEECCCCCEEeCcCCCCcc--cceEECCCCCEEEEEEC--CCCCcEEEEEECCCCCEEEEecCCC--cccCeEECCCCC
Confidence 88888887766554321100 0001112565 444443 1113478899998877554433221 1112222 2565
Q ss_pred -EEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCC
Q 046476 260 -LGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKT 338 (376)
Q Consensus 260 -L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t 338 (376)
|++.... .....+.+|-++. .... . +.... ....+++.++|..++....-.....++.+|+++
T Consensus 324 ~l~~~~~~--~g~~~i~~~d~~~------~~~~---~-l~~~~----~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g 387 (415)
T 2hqs_A 324 FMVMVSSN--GGQQHIAKQDLAT------GGVQ---V-LSSTF----LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDG 387 (415)
T ss_dssp EEEEEEEC--SSCEEEEEEETTT------CCEE---E-CCCSS----SCEEEEECTTSSEEEEEEEETTEEEEEEEETTS
T ss_pred EEEEEECc--CCceEEEEEECCC------CCEE---E-ecCCC----CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCC
Confidence 4444333 1223455554432 1222 2 22211 124567778887554432111223899999998
Q ss_pred CcEEEE
Q 046476 339 QERRAI 344 (376)
Q Consensus 339 ~~~~~v 344 (376)
+..+.+
T Consensus 388 ~~~~~l 393 (415)
T 2hqs_A 388 RFKARL 393 (415)
T ss_dssp CCEEEC
T ss_pred CcEEEe
Confidence 888766
No 97
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=67.82 E-value=1.1e+02 Score=30.88 Aligned_cols=203 Identities=10% Similarity=0.064 Sum_probs=98.6
Q ss_pred cccceEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCc
Q 046476 89 LINGFICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSS 168 (376)
Q Consensus 89 s~nGLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~ 168 (376)
..+|-+-+.. ...++++||.++++..+...+... ..... .....+-.|.... +++.+.
T Consensus 271 d~~g~lWigt--~~Gl~~~~~~~~~~~~~~~~~~~~----~~l~~-----~~i~~i~~D~~g~----lWigt~------- 328 (795)
T 4a2l_A 271 DSQNRLWIGT--FNDLNIYHEGTDSFASYSSNPVEN----GSLSQ-----RSVRSIFMDSQGG----MWLGTY------- 328 (795)
T ss_dssp CTTSCEEEEE--SSCEEEEETTTTEEEEECCCTTST----TSCSS-----SCEEEEEECTTSC----EEEEES-------
T ss_pred cCCCCEEEEe--CChhheEcCCCCeEEEEecCCCCC----CCCCC-----CcEEEEEEeCCcC----EEEEEC-------
Confidence 3456665553 236788888888877665432211 01111 2344455554321 334332
Q ss_pred ccceecCCCCCeEEEEEcCCCCeeecCCCCC--ccee-cCCceEE--CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeC
Q 046476 169 YAWMIDNHGTPECEIFTLGTTSWRKIDAPPS--RIHF-RRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKL 243 (376)
Q Consensus 169 ~~~~~~~~~~~~~~vys~~t~~Wr~~~~~~~--~~~~-~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~ 243 (376)
...+..|+..++.++.....+. .... .-.+++. +|. .|++.. .+.|..||..+.+|..+..
T Consensus 329 ---------~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~----~~Gl~~~~~~~~~~~~~~~ 394 (795)
T 4a2l_A 329 ---------FGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTN----DGGLNLYNPITQRFTSYTL 394 (795)
T ss_dssp ---------SSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEES----SSCEEEECTTTCCEEEECC
T ss_pred ---------CCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEEC----CCCeEEEcCCCCcEEEEec
Confidence 2345556665555554432211 0000 1112333 355 455551 4579999999999988764
Q ss_pred CC-----cc--cCcceeEe-cCCe-EEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEcc
Q 046476 244 PD-----EV--RKHHDLIQ-AEEK-LGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSN 314 (376)
Q Consensus 244 P~-----~~--~~~~~L~~-~~g~-L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~ 314 (376)
+. .. ..-..+.+ .+|. |.+.... .. |..++.. ...+... . .....+.-.....+....
T Consensus 395 ~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~-----~G--l~~~d~~----~~~~~~~-~-~~~~~l~~~~v~~i~~d~ 461 (795)
T 4a2l_A 395 QEDESARGIGSNNIKAVYVDEKKSLVYIGTHA-----GG--LSILHRN----SGQVENF-N-QRNSQLVNENVYAILPDG 461 (795)
T ss_dssp C------CCSCSCEEEEEEETTTTEEEEEETT-----TE--EEEEETT----TCCEEEE-C-TTTSCCSCSCEEEEEECS
T ss_pred CCCCcccCCCCccEEEEEEcCCCCEEEEEeCc-----Cc--eeEEeCC----CCcEEEe-e-cCCCCcCCCeeEEEEECC
Confidence 32 11 11223333 3666 6665432 22 3444432 1222221 1 111111001123344455
Q ss_pred CCcEEEEecccCCCcEEEEEeCCCCcEEEEE
Q 046476 315 NGEILLTEYKSSLVSRVFIYDLKTQERRAIK 345 (376)
Q Consensus 315 ~g~il~~~~~~~~~~~v~~ydl~t~~~~~v~ 345 (376)
+|.|++.+ . ..++.||+++++++.+.
T Consensus 462 ~g~lwigt----~-~Gl~~~~~~~~~~~~~~ 487 (795)
T 4a2l_A 462 EGNLWLGT----L-SALVRFNPEQRSFTTIE 487 (795)
T ss_dssp SSCEEEEE----S-SCEEEEETTTTEEEECC
T ss_pred CCCEEEEe----c-CceeEEeCCCCeEEEcc
Confidence 78888887 4 67999999998887653
No 98
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=67.72 E-value=62 Score=32.26 Aligned_cols=123 Identities=13% Similarity=0.118 Sum_probs=67.9
Q ss_pred cCCceEECceEEEEEeCCCCCCCEEEEEEcCC--ceeEEE-eCCCcc-------cCcceeEecCCeEEEEEecCCCCCCe
Q 046476 204 RRQGLCANGFIHWIITNPRKTKPVLAVFDVKE--EKFDIV-KLPDEV-------RKHHDLIQAEEKLGVLDCDDFRSKNK 273 (376)
Q Consensus 204 ~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~--e~~~~i-~~P~~~-------~~~~~L~~~~g~L~~~~~~~~~~~~~ 273 (376)
...++..+|.+|..+. .+.+.++|..+ +.|+.- ..+... .....+...+|+|++...+ .
T Consensus 63 ~~~P~v~~g~vyv~~~-----~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~d-----g- 131 (689)
T 1yiq_A 63 EATPIVVDGVMYTTGP-----FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLD-----G- 131 (689)
T ss_dssp CCCCEEETTEEEEECG-----GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT-----S-
T ss_pred eecCEEECCEEEEEcC-----CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccC-----C-
Confidence 3557889999999876 66799999875 456532 122111 0122345567887766532 2
Q ss_pred EEEEEEccCCCCCCCceeEEEEEeeccccccc-CcEeEEEccCCcEEEEeccc--CCCcEEEEEeCCCCcEEEE
Q 046476 274 IRVWILKDYGRGGGEVWIRRDYVFRFDTIMFR-PPIPVSNSNNGEILLTEYKS--SLVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 274 ~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~-~~~~v~~~~~g~il~~~~~~--~~~~~v~~ydl~t~~~~~v 344 (376)
.|..|+-.. .+..|..... .+.... .. ...|+. .++.+++..... ..++.|++||++|.+..+-
T Consensus 132 -~l~AlDa~T--G~~~W~~~~~-~~~~~~-~~~~~sP~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 132 -RLEAIDAKT--GQRAWSVDTR-ADHKRS-YTITGAPRV--VNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp -EEEEEETTT--CCEEEEEECC-SCTTSC-CBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred -EEEEEECCC--CCEeeeecCc-CCCCCC-ccccCCcEE--ECCEEEEEeCCCccCCCCEEEEEECCCCcEEEE
Confidence 345555321 3567876532 121110 00 113433 256666643110 1257899999999987654
No 99
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=67.30 E-value=59 Score=27.80 Aligned_cols=136 Identities=6% Similarity=0.026 Sum_probs=72.7
Q ss_pred CeEEEEEcCCCCeeecCCCCCcceecCCceEE--CceEEEEEeCCCCCCCEEEEEEcCCceeEE-EeCCCcccCcceeEe
Q 046476 179 PECEIFTLGTTSWRKIDAPPSRIHFRRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKEEKFDI-VKLPDEVRKHHDLIQ 255 (376)
Q Consensus 179 ~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~-i~~P~~~~~~~~L~~ 255 (376)
..+.+|+..++.....-..... .-..+.+ +|.....+. .++.|..||+.+.+... +..+.. ...+.-
T Consensus 163 g~v~~~d~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~----~dg~i~~~d~~~~~~~~~~~~~~~---v~~~~~ 232 (337)
T 1gxr_A 163 GNIAVWDLHNQTLVRQFQGHTD---GASCIDISNDGTKLWTGG----LDNTVRSWDLREGRQLQQHDFTSQ---IFSLGY 232 (337)
T ss_dssp SCEEEEETTTTEEEEEECCCSS---CEEEEEECTTSSEEEEEE----TTSEEEEEETTTTEEEEEEECSSC---EEEEEE
T ss_pred CcEEEEeCCCCceeeeeecccC---ceEEEEECCCCCEEEEEe----cCCcEEEEECCCCceEeeecCCCc---eEEEEE
Confidence 4577888877643222111000 0111122 454444444 16789999998765433 333322 122222
Q ss_pred -cCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEE
Q 046476 256 -AEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIY 334 (376)
Q Consensus 256 -~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~y 334 (376)
-+|.+.++... ...+.+|-++.. . ... +..+.. ....+.+..++..++... .++.+.+|
T Consensus 233 s~~~~~l~~~~~----~~~i~~~~~~~~-----~----~~~-~~~~~~---~v~~~~~~~~~~~l~~~~---~dg~i~~~ 292 (337)
T 1gxr_A 233 CPTGEWLAVGME----SSNVEVLHVNKP-----D----KYQ-LHLHES---CVLSLKFAYCGKWFVSTG---KDNLLNAW 292 (337)
T ss_dssp CTTSSEEEEEET----TSCEEEEETTSS-----C----EEE-ECCCSS---CEEEEEECTTSSEEEEEE---TTSEEEEE
T ss_pred CCCCCEEEEEcC----CCcEEEEECCCC-----C----eEE-EcCCcc---ceeEEEECCCCCEEEEec---CCCcEEEE
Confidence 25555555444 567899977643 1 122 222221 224567777787666542 68899999
Q ss_pred eCCCCcEEEE
Q 046476 335 DLKTQERRAI 344 (376)
Q Consensus 335 dl~t~~~~~v 344 (376)
|+++++....
T Consensus 293 ~~~~~~~~~~ 302 (337)
T 1gxr_A 293 RTPYGASIFQ 302 (337)
T ss_dssp ETTTCCEEEE
T ss_pred ECCCCeEEEE
Confidence 9998876643
No 100
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=67.16 E-value=59 Score=27.73 Aligned_cols=196 Identities=11% Similarity=0.028 Sum_probs=102.9
Q ss_pred EEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCccccee
Q 046476 94 ICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSYAWMI 173 (376)
Q Consensus 94 l~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~ 173 (376)
+++.......++++||.++ ...+..+. ....++.+++... ++... ..
T Consensus 42 l~~~~~~~~~i~~~~~~~~-~~~~~~~~-----------------~~~~~l~~~~dg~---l~v~~-~~----------- 88 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ-LSPEMHPS-----------------HHQNGHCLNKQGH---LIACS-HG----------- 88 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC-EEEEESSC-----------------SSEEEEEECTTCC---EEEEE-TT-----------
T ss_pred EEEEeCCCCEEEEEECCCC-eEEEECCC-----------------CCcceeeECCCCc---EEEEe-cC-----------
Confidence 4444335678999999998 55443221 1345666676432 22221 11
Q ss_pred cCCCCCeEEEEEcCCCCeeecCCCCCccee-cCCceEE--CceEEEEEeC-------------CCCCCCEEEEEEcCCce
Q 046476 174 DNHGTPECEIFTLGTTSWRKIDAPPSRIHF-RRQGLCA--NGFIHWIITN-------------PRKTKPVLAVFDVKEEK 237 (376)
Q Consensus 174 ~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~-~~~~v~~--~G~lywl~~~-------------~~~~~~~il~fDl~~e~ 237 (376)
...+.+|+..++..+........... ....+.+ +|.+|+.... .......|..+|.. .+
T Consensus 89 ----~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~ 163 (296)
T 3e5z_A 89 ----LRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT 163 (296)
T ss_dssp ----TTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC
T ss_pred ----CCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC
Confidence 35677888877776654322111111 2223333 5877664210 00013579999987 55
Q ss_pred eEEEeCCCcccCcceeEe-cCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCce-eEEEEEeecccccccCcEeEEEccC
Q 046476 238 FDIVKLPDEVRKHHDLIQ-AEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVW-IRRDYVFRFDTIMFRPPIPVSNSNN 315 (376)
Q Consensus 238 ~~~i~~P~~~~~~~~L~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W-~~~~~ii~~~~~~~~~~~~v~~~~~ 315 (376)
+..+.-... ....+.. -+|++.++... ...+.+|-++.. ... ..... + .... ....-+++..+
T Consensus 164 ~~~~~~~~~--~~~gi~~s~dg~~lv~~~~----~~~i~~~~~~~~-----g~~~~~~~~-~-~~~~--~~p~~i~~d~~ 228 (296)
T 3e5z_A 164 LSAPIRDRV--KPNGLAFLPSGNLLVSDTG----DNATHRYCLNAR-----GETEYQGVH-F-TVEP--GKTDGLRVDAG 228 (296)
T ss_dssp EEEEECCCS--SEEEEEECTTSCEEEEETT----TTEEEEEEECSS-----SCEEEEEEE-E-CCSS--SCCCSEEEBTT
T ss_pred EEEeecCCC--CCccEEECCCCCEEEEeCC----CCeEEEEEECCC-----CcCcCCCeE-e-eCCC--CCCCeEEECCC
Confidence 555432211 1122333 36765543332 567777777632 233 22333 3 1111 11134677788
Q ss_pred CcEEEEecccCCCcEEEEEeCCCCcEEEEEEC
Q 046476 316 GEILLTEYKSSLVSRVFIYDLKTQERRAIKIP 347 (376)
Q Consensus 316 g~il~~~~~~~~~~~v~~ydl~t~~~~~v~~~ 347 (376)
|.+++.. ...|..||++.+.++.+...
T Consensus 229 G~l~v~~-----~~~v~~~~~~g~~~~~~~~~ 255 (296)
T 3e5z_A 229 GLIWASA-----GDGVHVLTPDGDELGRVLTP 255 (296)
T ss_dssp SCEEEEE-----TTEEEEECTTSCEEEEEECS
T ss_pred CCEEEEc-----CCeEEEECCCCCEEEEEECC
Confidence 9887766 67899999998877777653
No 101
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=65.80 E-value=73 Score=28.30 Aligned_cols=100 Identities=9% Similarity=0.009 Sum_probs=51.6
Q ss_pred CCEEEEEEcCCceeEE-EeCCCcccCcceeEec--CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeeccc
Q 046476 225 KPVLAVFDVKEEKFDI-VKLPDEVRKHHDLIQA--EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDT 301 (376)
Q Consensus 225 ~~~il~fDl~~e~~~~-i~~P~~~~~~~~L~~~--~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~ 301 (376)
++.|..+|+.+.+... +...........+.-. ++.+.++... ...+.||-+... + .... +....
T Consensus 203 dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~----d~~i~~wd~~~~----~----~~~~-~~~~~ 269 (357)
T 4g56_B 203 DGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDE----TGNVSLVNIKNP----D----SAQT-SAVHS 269 (357)
T ss_dssp TSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEES----SSCEEEEESSCG----G----GCEE-ECCCS
T ss_pred CCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeec----ccceeEEECCCC----c----EeEE-Eeccc
Confidence 5678889988754322 2221111111122222 3455444433 677899976642 1 1223 22221
Q ss_pred ccccCcEeEEEccCC-cEEEEecccCCCcEEEEEeCCCCcEEE
Q 046476 302 IMFRPPIPVSNSNNG-EILLTEYKSSLVSRVFIYDLKTQERRA 343 (376)
Q Consensus 302 ~~~~~~~~v~~~~~g-~il~~~~~~~~~~~v~~ydl~t~~~~~ 343 (376)
- ....+++..++ .++... +.++.|.+||+++++...
T Consensus 270 ~---~v~~l~~sp~~~~~lasg---s~D~~i~iwd~~~~~~~~ 306 (357)
T 4g56_B 270 Q---NITGLAYSYHSSPFLASI---SEDCTVAVLDADFSEVFR 306 (357)
T ss_dssp S---CEEEEEECSSSSCCEEEE---ETTSCEEEECTTSCEEEE
T ss_pred e---eEEEEEEcCCCCCEEEEE---eCCCEEEEEECCCCcEeE
Confidence 1 22456666665 455433 167889999999887654
No 102
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=65.74 E-value=55 Score=28.24 Aligned_cols=29 Identities=14% Similarity=-0.080 Sum_probs=17.3
Q ss_pred CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCC
Q 046476 211 NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLP 244 (376)
Q Consensus 211 ~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P 244 (376)
+|.+|.-+. ...|.+||.+.+.......+
T Consensus 147 ~g~l~vgt~-----~~~l~~~d~~g~~~~~~~~~ 175 (330)
T 3hxj_A 147 DGTIYVGSN-----DNYLYAINPDGTEKWRFKTN 175 (330)
T ss_dssp TSCEEEECT-----TSEEEEECTTSCEEEEEECS
T ss_pred CCEEEEEcC-----CCEEEEECCCCCEeEEEecC
Confidence 566554333 57899999984333344444
No 103
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=65.61 E-value=1.2e+02 Score=30.52 Aligned_cols=204 Identities=13% Similarity=0.055 Sum_probs=101.3
Q ss_pred ccceEEEEEecCcEEEEEecCCcceecCCCCCcc-cCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCc
Q 046476 90 INGFICFYNIVGFEILMRNVVTQEIIDLPKSTFV-VSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSS 168 (376)
Q Consensus 90 ~nGLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~-~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~ 168 (376)
.+|-|-+.. ....+..++|.++.+......+.. .. ..... .....+..|.... +.+.+.
T Consensus 322 ~~g~lWigt-~~~Gl~~~~~~~~~~~~~~~~~~~~~~---~~l~~-----~~v~~i~~d~~g~----lWigt~------- 381 (781)
T 3v9f_A 322 SFNNIWIGT-WGGGINFISNAPPTFHTWSYSPTQMNE---SSLSN-----KVVSSVCDDGQGK----LWIGTD------- 381 (781)
T ss_dssp SSCCEEEEE-BSSCEEEECSSCCSCEEEC----CCCS---SCCSS-----SCEEEEEECTTSC----EEEEEB-------
T ss_pred CCCCEEEEe-cCCeEEEeCCCCCcceeeccCcccccc---CCCCC-----cceEEEEEcCCCC----EEEEeC-------
Confidence 345554442 356688889988877665432110 00 00111 1334444454321 333332
Q ss_pred ccceecCCCCCeEEEEEcCCCCeeecCCCCCccee-cCCceEE--CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCC
Q 046476 169 YAWMIDNHGTPECEIFTLGTTSWRKIDAPPSRIHF-RRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPD 245 (376)
Q Consensus 169 ~~~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~-~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~ 245 (376)
...+..|+.+++.++..... ..... .-.+++. +|.+ |++.. ...|..||..++++..+..+.
T Consensus 382 ---------~~Gl~~~~~~~~~~~~~~~~-~~~~~~~v~~i~~d~~g~l-Wigt~----~~Gl~~~~~~~~~~~~~~~~~ 446 (781)
T 3v9f_A 382 ---------GGGINVFENGKRVAIYNKEN-RELLSNSVLCSLKDSEGNL-WFGTY----LGNISYYNTRLKKFQIIELEK 446 (781)
T ss_dssp ---------SSCEEEEETTEEEEECC------CCCSBEEEEEECTTSCE-EEEET----TEEEEEECSSSCEEEECCSTT
T ss_pred ---------CCcEEEEECCCCeEEEccCC-CCCCCcceEEEEECCCCCE-EEEec----cCCEEEEcCCCCcEEEeccCC
Confidence 13355666666555543211 00000 1122333 3554 55541 467999999999998776431
Q ss_pred cc-cCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEec
Q 046476 246 EV-RKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEY 323 (376)
Q Consensus 246 ~~-~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~ 323 (376)
.. .....+.+- +|.|.+.... .|+.++.. ...|..... .+...........+....+|.|++.+
T Consensus 447 ~~~~~v~~i~~d~~g~lwigt~~--------Gl~~~~~~----~~~~~~~~~-~~~~~~~~~~i~~i~~d~~g~lWigt- 512 (781)
T 3v9f_A 447 NELLDVRVFYEDKNKKIWIGTHA--------GVFVIDLA----SKKVIHHYD-TSNSQLLENFVRSIAQDSEGRFWIGT- 512 (781)
T ss_dssp TCCCCEEEEEECTTSEEEEEETT--------EEEEEESS----SSSCCEEEC-TTTSSCSCSCEEEEEECTTCCEEEEE-
T ss_pred CCCCeEEEEEECCCCCEEEEECC--------ceEEEeCC----CCeEEeccc-CcccccccceeEEEEEcCCCCEEEEE-
Confidence 11 122233333 6777766532 35555532 345655433 22111100122345556688899887
Q ss_pred ccCCCcEEEEEeCCCCcEEEEE
Q 046476 324 KSSLVSRVFIYDLKTQERRAIK 345 (376)
Q Consensus 324 ~~~~~~~v~~ydl~t~~~~~v~ 345 (376)
....++.||+++++++.+.
T Consensus 513 ---~~~Gl~~~~~~~~~~~~~~ 531 (781)
T 3v9f_A 513 ---FGGGVGIYTPDMQLVRKFN 531 (781)
T ss_dssp ---SSSCEEEECTTCCEEEEEC
T ss_pred ---cCCCEEEEeCCCCeEEEcc
Confidence 5567999999998887653
No 104
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=64.70 E-value=1.1e+02 Score=29.95 Aligned_cols=194 Identities=10% Similarity=0.041 Sum_probs=94.0
Q ss_pred cEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcccceecCCCCCeE
Q 046476 102 FEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSYAWMIDNHGTPEC 181 (376)
Q Consensus 102 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (376)
..++++|..|++...+....... .....+.+.|..+ + ++....... .....+
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~--------------~~~~~~~~spdg~-~-l~~~~~~~~------------~~~~~v 286 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKE--------------KFLTNLSWSPDEN-I-LYVAEVNRA------------QNECKV 286 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTT--------------CEEEEEEECTTSS-E-EEEEEECTT------------SCEEEE
T ss_pred eEEEEEECCCCceEeeccCCCCc--------------eeEeeEEEECCCC-E-EEEEEeCCC------------CCeeEE
Confidence 46899999998876654321111 1334455555432 2 222221111 113467
Q ss_pred EEEEcCCC-CeeecCCCCCccee-cCCceEE----CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcccCcce-eE
Q 046476 182 EIFTLGTT-SWRKIDAPPSRIHF-RRQGLCA----NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEVRKHHD-LI 254 (376)
Q Consensus 182 ~vys~~t~-~Wr~~~~~~~~~~~-~~~~v~~----~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~~~~~~-L~ 254 (376)
.+++..++ ..+.+......... ...++.+ ||.+.+.+. .+....|..+|...+....+..... .... +.
T Consensus 287 ~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~--~~g~~~l~~~~~~~~~~~~l~~~~~--~v~~~~~ 362 (706)
T 2z3z_A 287 NAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSR--RDGWNHLYLYDTTGRLIRQVTKGEW--EVTNFAG 362 (706)
T ss_dssp EEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEEC--TTSSCEEEEEETTSCEEEECCCSSS--CEEEEEE
T ss_pred EEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEc--cCCccEEEEEECCCCEEEecCCCCe--EEEeeeE
Confidence 77777777 66554311000000 0112222 788666654 2224567778876666655532211 1111 22
Q ss_pred ec-CC-eEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEe-cccCCCcEE
Q 046476 255 QA-EE-KLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTE-YKSSLVSRV 331 (376)
Q Consensus 255 ~~-~g-~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~-~~~~~~~~v 331 (376)
-. +| .|++.... .......||.++-.+ ... .. +.... ....+++..+|+.++.. ........+
T Consensus 363 ~spdg~~l~~~~~~--~~~~~~~l~~~d~~~----~~~---~~-l~~~~----~~~~~~~spdg~~l~~~~~~~~~p~~i 428 (706)
T 2z3z_A 363 FDPKGTRLYFESTE--ASPLERHFYCIDIKG----GKT---KD-LTPES----GMHRTQLSPDGSAIIDIFQSPTVPRKV 428 (706)
T ss_dssp ECTTSSEEEEEESS--SCTTCBEEEEEETTC----CCC---EE-SCCSS----SEEEEEECTTSSEEEEEEECSSCSCEE
T ss_pred EcCCCCEEEEEecC--CCCceEEEEEEEcCC----CCc---ee-ccCCC----ceEEEEECCCCCEEEEEecCCCCCcEE
Confidence 22 45 45555543 122357788887432 221 22 33211 12345667777755433 222234679
Q ss_pred EEEeCCCCcE
Q 046476 332 FIYDLKTQER 341 (376)
Q Consensus 332 ~~ydl~t~~~ 341 (376)
+++|+++++.
T Consensus 429 ~l~d~~~~~~ 438 (706)
T 2z3z_A 429 TVTNIGKGSH 438 (706)
T ss_dssp EEEESSSCEE
T ss_pred EEEECCCCeE
Confidence 9999988873
No 105
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=64.54 E-value=70 Score=27.68 Aligned_cols=112 Identities=14% Similarity=0.007 Sum_probs=55.6
Q ss_pred Cce-EEEEEeCCCCCCCEEEEEEcCCceeEE-EeCCCcccCcceeE-ecCCe-EEEEEecCCCCCCeEEEEEEccCCCCC
Q 046476 211 NGF-IHWIITNPRKTKPVLAVFDVKEEKFDI-VKLPDEVRKHHDLI-QAEEK-LGVLDCDDFRSKNKIRVWILKDYGRGG 286 (376)
Q Consensus 211 ~G~-lywl~~~~~~~~~~il~fDl~~e~~~~-i~~P~~~~~~~~L~-~~~g~-L~~~~~~~~~~~~~~~IW~l~~~~~g~ 286 (376)
+|. +|.... +....|..+|+++.+... ++.+... ...+. .-+|+ |++.. . ...+.+|-++.
T Consensus 151 dg~~l~~~~~---~~~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~-~----~~~i~~~d~~~----- 215 (353)
T 3vgz_A 151 ATNTVYISGI---GKESVIWVVDGGNIKLKTAIQNTGKM--STGLALDSEGKRLYTTN-A----DGELITIDTAD----- 215 (353)
T ss_dssp TTTEEEEEEE---SSSCEEEEEETTTTEEEEEECCCCTT--CCCCEEETTTTEEEEEC-T----TSEEEEEETTT-----
T ss_pred CCCEEEEEec---CCCceEEEEcCCCCceEEEecCCCCc--cceEEECCCCCEEEEEc-C----CCeEEEEECCC-----
Confidence 554 555443 125679999998876543 3322211 11222 22554 44433 2 45666664432
Q ss_pred CCceeEEEEE-eecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEEE
Q 046476 287 GEVWIRRDYV-FRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERRA 343 (376)
Q Consensus 287 ~~~W~~~~~i-i~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~~ 343 (376)
......+ .+...- .....-+++..+|+.++... ...+.+.+||+++++...
T Consensus 216 ---~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~--~~~~~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 216 ---NKILSRKKLLDDGK-EHFFINISLDTARQRAFITD--SKAAEVLVVDTRNGNILA 267 (353)
T ss_dssp ---TEEEEEEECCCSSS-CCCEEEEEEETTTTEEEEEE--SSSSEEEEEETTTCCEEE
T ss_pred ---CeEEEEEEcCCCCC-CcccceEEECCCCCEEEEEe--CCCCEEEEEECCCCcEEE
Confidence 1222221 211111 01113357777777554431 245899999998887643
No 106
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=64.31 E-value=71 Score=27.64 Aligned_cols=110 Identities=15% Similarity=0.093 Sum_probs=64.7
Q ss_pred ceEEEEEeCCCCCCCEEEEEEcCCcee-EEEeCCCcccCcceeEecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCce
Q 046476 212 GFIHWIITNPRKTKPVLAVFDVKEEKF-DIVKLPDEVRKHHDLIQAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVW 290 (376)
Q Consensus 212 G~lywl~~~~~~~~~~il~fDl~~e~~-~~i~~P~~~~~~~~L~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W 290 (376)
|.+|.-+. ......|..+|+.+.+- ..+++|... ....+...+++|+++... ... +++.+- ..-
T Consensus 32 g~Lyvstg--~~~~s~v~~iD~~tg~v~~~i~l~~~~-fgeGi~~~g~~lyv~t~~----~~~--v~viD~------~t~ 96 (266)
T 2iwa_A 32 DTLFESTG--LYGRSSVRQVALQTGKVENIHKMDDSY-FGEGLTLLNEKLYQVVWL----KNI--GFIYDR------RTL 96 (266)
T ss_dssp TEEEEEEC--STTTCEEEEEETTTCCEEEEEECCTTC-CEEEEEEETTEEEEEETT----CSE--EEEEET------TTT
T ss_pred CeEEEECC--CCCCCEEEEEECCCCCEEEEEecCCCc-ceEEEEEeCCEEEEEEec----CCE--EEEEEC------CCC
Confidence 67777654 11257899999998765 456776542 112345557788888754 333 555552 234
Q ss_pred eEEEEEeecccccccCcEeEEEccCCc-EEEEecccCCCcEEEEEeCCCCcE-EEEEE
Q 046476 291 IRRDYVFRFDTIMFRPPIPVSNSNNGE-ILLTEYKSSLVSRVFIYDLKTQER-RAIKI 346 (376)
Q Consensus 291 ~~~~~ii~~~~~~~~~~~~v~~~~~g~-il~~~~~~~~~~~v~~ydl~t~~~-~~v~~ 346 (376)
..+.+ |+.. . . ..+++..+|. ++... ..+.|.+.|++|.+. +.|.+
T Consensus 97 ~v~~~-i~~g-~--~--~g~glt~Dg~~l~vs~----gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 97 SNIKN-FTHQ-M--K--DGWGLATDGKILYGSD----GTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp EEEEE-EECC-S--S--SCCEEEECSSSEEEEC----SSSEEEEECTTTCCEEEEEEC
T ss_pred cEEEE-EECC-C--C--CeEEEEECCCEEEEEC----CCCeEEEEECCCCcEEEEEEE
Confidence 45555 4432 1 1 2344545555 55544 578999999999654 45443
No 107
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=63.28 E-value=75 Score=27.54 Aligned_cols=72 Identities=14% Similarity=0.180 Sum_probs=38.3
Q ss_pred CeEEEEEecCCCCCCeEEEEEEccCCC------CCCCceeEEEEEeecccccccCcEeEEEccC--CcEEEEecccCCCc
Q 046476 258 EKLGVLDCDDFRSKNKIRVWILKDYGR------GGGEVWIRRDYVFRFDTIMFRPPIPVSNSNN--GEILLTEYKSSLVS 329 (376)
Q Consensus 258 g~L~~~~~~~~~~~~~~~IW~l~~~~~------g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~--g~il~~~~~~~~~~ 329 (376)
|.+.+.... ...+.+|-+..... ........... +..+.. ....+++..+ +.+++.. ..++
T Consensus 241 ~~~l~~~~~----d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~v~~~~~s~~~~~~~l~~~---~~dg 309 (366)
T 3k26_A 241 GDLILSKSC----ENAIVCWKPGKMEDDIDKIKPSESNVTILGR-FDYSQC---DIWYMRFSMDFWQKMLALG---NQVG 309 (366)
T ss_dssp TTEEEEECS----SSEEEEEEESSTTCCGGGCCTTCCCEEEEEE-EECSSC---CSSCCCCEECTTSSEEEEE---CTTS
T ss_pred CCEEEEEec----CCEEEEEeCCCccccccccccCCcchheecc-ccccCC---cEEEEEEcCCCCCcEEEEE---ecCC
Confidence 554444433 78899999865310 00112222333 332221 1123344445 7777655 2678
Q ss_pred EEEEEeCCCCc
Q 046476 330 RVFIYDLKTQE 340 (376)
Q Consensus 330 ~v~~ydl~t~~ 340 (376)
.|.+||+++++
T Consensus 310 ~i~vwd~~~~~ 320 (366)
T 3k26_A 310 KLYVWDLEVED 320 (366)
T ss_dssp CEEEEECCSSS
T ss_pred cEEEEECCCCC
Confidence 89999998864
No 108
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=62.61 E-value=72 Score=27.16 Aligned_cols=197 Identities=9% Similarity=0.018 Sum_probs=95.1
Q ss_pred cCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcccceecCCCCC
Q 046476 100 VGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSYAWMIDNHGTP 179 (376)
Q Consensus 100 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~~~ 179 (376)
....++++||.+++...+..+.... .. ....++.+|+..+. +.... . ..
T Consensus 44 ~~~~i~~~d~~~g~~~~~~~~~~~~------~~------~~~~~i~~~~~~g~--l~v~~-~----------------~~ 92 (314)
T 1pjx_A 44 PAGEILRIDLKTGKKTVICKPEVNG------YG------GIPAGCQCDRDANQ--LFVAD-M----------------RL 92 (314)
T ss_dssp ECCEEEEECTTTCCEEEEECCEETT------EE------CCEEEEEECSSSSE--EEEEE-T----------------TT
T ss_pred CCCEEEEEeCCCCcEEEEEecccCC------CC------CCCceEEEecCCCc--EEEEE-C----------------CC
Confidence 5667999999999887654311100 00 13456666665222 22211 1 12
Q ss_pred eEEEEEcCCCCeeec-CCCCCccee-cCCceEE--CceEEEEEeCCC-----------CCCCEEEEEEcCCceeEEEeCC
Q 046476 180 ECEIFTLGTTSWRKI-DAPPSRIHF-RRQGLCA--NGFIHWIITNPR-----------KTKPVLAVFDVKEEKFDIVKLP 244 (376)
Q Consensus 180 ~~~vys~~t~~Wr~~-~~~~~~~~~-~~~~v~~--~G~lywl~~~~~-----------~~~~~il~fDl~~e~~~~i~~P 244 (376)
.+.+|+.. +..+.. ......... ....+.+ +|.+|+...... .....|..+|.. .++..+.-.
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~ 170 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA 170 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC
Confidence 56777777 665544 221111111 2334444 577766543100 002578999987 555443211
Q ss_pred CcccCcceeE-e----cCC-eEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEE--eecccccccCcEeEEEccCC
Q 046476 245 DEVRKHHDLI-Q----AEE-KLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYV--FRFDTIMFRPPIPVSNSNNG 316 (376)
Q Consensus 245 ~~~~~~~~L~-~----~~g-~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~i--i~~~~~~~~~~~~v~~~~~g 316 (376)
. .....+. . -+| .|++.... ...+.+|-++.. ........+ ++.... ....-+++..+|
T Consensus 171 ~--~~~~~i~~~~~~d~dg~~l~v~~~~----~~~i~~~~~~~~-----g~~~~~~~~~~~~~~~~--~~p~~i~~d~~G 237 (314)
T 1pjx_A 171 F--QFPNGIAVRHMNDGRPYQLIVAETP----TKKLWSYDIKGP-----AKIENKKVWGHIPGTHE--GGADGMDFDEDN 237 (314)
T ss_dssp E--SSEEEEEEEECTTSCEEEEEEEETT----TTEEEEEEEEET-----TEEEEEEEEEECCCCSS--CEEEEEEEBTTC
T ss_pred C--CCcceEEEecccCCCCCEEEEEECC----CCeEEEEECCCC-----CccccceEEEECCCCCC--CCCCceEECCCC
Confidence 0 0111122 2 345 45555543 566667765532 123222221 221110 111235667788
Q ss_pred cEEEEecccCCCcEEEEEeCCCCc-EEEEE
Q 046476 317 EILLTEYKSSLVSRVFIYDLKTQE-RRAIK 345 (376)
Q Consensus 317 ~il~~~~~~~~~~~v~~ydl~t~~-~~~v~ 345 (376)
.+++... ..+.|..||+++++ .+.+.
T Consensus 238 ~l~v~~~---~~~~i~~~d~~~g~~~~~~~ 264 (314)
T 1pjx_A 238 NLLVANW---GSSHIEVFGPDGGQPKMRIR 264 (314)
T ss_dssp CEEEEEE---TTTEEEEECTTCBSCSEEEE
T ss_pred CEEEEEc---CCCEEEEEcCCCCcEeEEEe
Confidence 8888752 46789999998543 44443
No 109
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=62.31 E-value=2.8 Score=38.49 Aligned_cols=30 Identities=7% Similarity=0.046 Sum_probs=19.6
Q ss_pred CceEECceEEEEEeCCCCCCCEEEEEEcCCc--eeEE
Q 046476 206 QGLCANGFIHWIITNPRKTKPVLAVFDVKEE--KFDI 240 (376)
Q Consensus 206 ~~v~~~G~lywl~~~~~~~~~~il~fDl~~e--~~~~ 240 (376)
.++..+|.+|.-+. ++.|.++|..+. .|+.
T Consensus 4 sP~v~~~~v~~gs~-----dg~v~a~d~~tG~~~W~~ 35 (369)
T 2hz6_A 4 TVTLPETLLFVSTL-----DGSLHAVSKRTGSIKWTL 35 (369)
T ss_dssp ----CTTEEEEEET-----TSEEEEEETTTCCEEEEE
T ss_pred CCeeeCCEEEEEcC-----CCEEEEEECCCCCEEEEe
Confidence 34566788888766 788999998765 4543
No 110
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=61.56 E-value=81 Score=27.38 Aligned_cols=109 Identities=9% Similarity=-0.032 Sum_probs=63.4
Q ss_pred ECceEEEEEeCCCCCCCEEEEEEcCCcee-EEEeCCCcccCcceeEecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCC
Q 046476 210 ANGFIHWIITNPRKTKPVLAVFDVKEEKF-DIVKLPDEVRKHHDLIQAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGE 288 (376)
Q Consensus 210 ~~G~lywl~~~~~~~~~~il~fDl~~e~~-~~i~~P~~~~~~~~L~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~ 288 (376)
.+|.+|.-+. ..+.|..+|+++.+. ..+ +|+.. ....+...+++|+++.-. .. .+|+.+- .
T Consensus 63 ~~~~Ly~stG----~~g~v~~iD~~Tgkv~~~~-l~~~~-FgeGit~~g~~Ly~ltw~----~~--~v~V~D~------~ 124 (268)
T 3nok_A 63 HQGHFFESTG----HQGTLRQLSLESAQPVWME-RLGNI-FAEGLASDGERLYQLTWT----EG--LLFTWSG------M 124 (268)
T ss_dssp ETTEEEEEET----TTTEEEECCSSCSSCSEEE-ECTTC-CEEEEEECSSCEEEEESS----SC--EEEEEET------T
T ss_pred ECCEEEEEcC----CCCEEEEEECCCCcEEeEE-CCCCc-ceeEEEEeCCEEEEEEcc----CC--EEEEEEC------C
Confidence 3566666554 144599999998766 345 66542 122366678889888643 33 4565553 2
Q ss_pred ceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEE-EEEE
Q 046476 289 VWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERR-AIKI 346 (376)
Q Consensus 289 ~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~-~v~~ 346 (376)
.-.++.+ |+... ..+++..++..++... ....+..+|++|.+.. .|.+
T Consensus 125 Tl~~~~t-i~~~~------eGwGLt~Dg~~L~vSd---Gs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 125 PPQRERT-TRYSG------EGWGLCYWNGKLVRSD---GGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp TTEEEEE-EECSS------CCCCEEEETTEEEEEC---SSSEEEEECTTTCCEEEEEEC
T ss_pred cCcEEEE-EeCCC------ceeEEecCCCEEEEEC---CCCEEEEEcCCCCeEEEEEEe
Confidence 3444555 44321 2344444555454442 5889999999986554 4444
No 111
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=61.37 E-value=81 Score=27.29 Aligned_cols=107 Identities=13% Similarity=0.127 Sum_probs=56.7
Q ss_pred CCEEEEEEcCC-ceeEEEe-CCCcccCcceeEec-C----CeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEe
Q 046476 225 KPVLAVFDVKE-EKFDIVK-LPDEVRKHHDLIQA-E----EKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVF 297 (376)
Q Consensus 225 ~~~il~fDl~~-e~~~~i~-~P~~~~~~~~L~~~-~----g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii 297 (376)
++.|-.+|+.+ ++|..+. +......-..+.-. + +.+.+.... ...+.||-+++. ....|.... +
T Consensus 188 D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~----D~~v~iw~~~~~---~~~~~~~~~--~ 258 (316)
T 3bg1_A 188 DNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQ----DGRVFIWTCDDA---SSNTWSPKL--L 258 (316)
T ss_dssp TSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEET----TCEEEEEECSST---TCCCCBCCE--E
T ss_pred CCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcC----CCeEEEEEccCc---cccchhhhh--h
Confidence 66788889874 3454442 22111111112111 2 244344433 679999988763 223344321 1
Q ss_pred ecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCC-CCcEEEEEE
Q 046476 298 RFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLK-TQERRAIKI 346 (376)
Q Consensus 298 ~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~-t~~~~~v~~ 346 (376)
..+. .....+++.+++.++... +.++.|.+||.. .++|+.+..
T Consensus 259 ~~~~---~~v~~v~~sp~g~~las~---~~D~~v~lw~~~~~g~~~~~~~ 302 (316)
T 3bg1_A 259 HKFN---DVVWHVSWSITANILAVS---GGDNKVTLWKESVDGQWVCISD 302 (316)
T ss_dssp EECS---SCEEEEEECTTTCCEEEE---ESSSCEEEEEECTTSCEEEEEE
T ss_pred hcCC---CcEEEEEEcCCCCEEEEE---cCCCeEEEEEECCCCcEEEeee
Confidence 1111 122456777888776654 267889999976 446766654
No 112
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=60.89 E-value=82 Score=27.24 Aligned_cols=70 Identities=13% Similarity=0.077 Sum_probs=41.4
Q ss_pred CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeC
Q 046476 257 EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDL 336 (376)
Q Consensus 257 ~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl 336 (376)
+|.+.++... ...+.+|-++.. ...... +..... ....+++..++..++... .++.+.+||+
T Consensus 186 ~~~~l~~~~~----dg~i~i~d~~~~-------~~~~~~-~~~~~~---~v~~~~~~~~~~~l~~~~---~d~~i~v~d~ 247 (369)
T 3zwl_B 186 KGKYIIAGHK----DGKISKYDVSNN-------YEYVDS-IDLHEK---SISDMQFSPDLTYFITSS---RDTNSFLVDV 247 (369)
T ss_dssp GGCEEEEEET----TSEEEEEETTTT-------TEEEEE-EECCSS---CEEEEEECTTSSEEEEEE---TTSEEEEEET
T ss_pred CCCEEEEEcC----CCEEEEEECCCC-------cEeEEE-EecCCC---ceeEEEECCCCCEEEEec---CCceEEEEEC
Confidence 4555444443 678999976642 222333 332221 224566677787666542 6789999999
Q ss_pred CCCcEEEE
Q 046476 337 KTQERRAI 344 (376)
Q Consensus 337 ~t~~~~~v 344 (376)
++.+....
T Consensus 248 ~~~~~~~~ 255 (369)
T 3zwl_B 248 STLQVLKK 255 (369)
T ss_dssp TTCCEEEE
T ss_pred CCCceeee
Confidence 98766543
No 113
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=60.26 E-value=87 Score=27.34 Aligned_cols=97 Identities=14% Similarity=0.147 Sum_probs=56.4
Q ss_pred CCEEEEEEcCCceeEEEeCCCcccCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeec-ccc
Q 046476 225 KPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRF-DTI 302 (376)
Q Consensus 225 ~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~-~~~ 302 (376)
++.|..||+++.+...+...........+.-. +|.+.++... ...+.||-++.. . . . ... +.. +.
T Consensus 148 dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~----dg~i~iwd~~~~---~-~--~-~~~-~~~~h~- 214 (343)
T 3lrv_A 148 RGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSP----DGILDVYNLSSP---D-Q--A-SSR-FPVDEE- 214 (343)
T ss_dssp TCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECT----TSCEEEEESSCT---T-S--C-CEE-CCCCTT-
T ss_pred CCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcC----CCEEEEEECCCC---C-C--C-ccE-EeccCC-
Confidence 67899999998776444322111112223322 6666555544 788999987653 1 1 1 022 222 22
Q ss_pred cccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCc
Q 046476 303 MFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQE 340 (376)
Q Consensus 303 ~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~ 340 (376)
.....+++.++|..++.. .+..+.+||+++.+
T Consensus 215 --~~v~~l~fs~~g~~l~s~----~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 215 --AKIKEVKFADNGYWMVVE----CDQTVVCFDLRKDV 246 (343)
T ss_dssp --SCEEEEEECTTSSEEEEE----ESSBEEEEETTSST
T ss_pred --CCEEEEEEeCCCCEEEEE----eCCeEEEEEcCCCC
Confidence 123556777788877776 35589999998764
No 114
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=59.74 E-value=97 Score=27.67 Aligned_cols=99 Identities=16% Similarity=0.109 Sum_probs=52.6
Q ss_pred CCEEEEEEcCCce--eEEEeCCCcccCcceeEecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccc
Q 046476 225 KPVLAVFDVKEEK--FDIVKLPDEVRKHHDLIQAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTI 302 (376)
Q Consensus 225 ~~~il~fDl~~e~--~~~i~~P~~~~~~~~L~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~ 302 (376)
++.|..||+.+.+ ...+..... .....+...+|.+.+.... ...+.||.+.+.. .. ... .. +.....
T Consensus 312 dg~i~vwd~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~l~s~~~----d~~v~iw~~~~~~---~~-~~~-~~-~~~~~~ 380 (420)
T 3vl1_A 312 NGMLAQWDLRSPECPVGEFLINEG-TPINNVYFAAGALFVSSGF----DTSIKLDIISDPE---SE-RPA-IE-FETPTF 380 (420)
T ss_dssp TSEEEEEETTCTTSCSEEEEESTT-SCEEEEEEETTEEEEEETT----TEEEEEEEECCTT---CC-SCE-EC-TTSCEE
T ss_pred CCeEEEEEcCCCcCchhhhhccCC-CCceEEEeCCCCEEEEecC----CccEEEEeccCCC---CC-ccc-ee-ccCccE
Confidence 6889999998754 333332111 1122233346765555443 6889999998642 11 111 11 111000
Q ss_pred ---cccCcEeEEEccCCc----EEEEecccCCCcEEEEEeCCC
Q 046476 303 ---MFRPPIPVSNSNNGE----ILLTEYKSSLVSRVFIYDLKT 338 (376)
Q Consensus 303 ---~~~~~~~v~~~~~g~----il~~~~~~~~~~~v~~ydl~t 338 (376)
.-.....+++..++. ++... ..+.+..|+++.
T Consensus 381 ~~~~~~~v~~~~~s~~~~~~g~l~a~g----~~g~~~~~~~~~ 419 (420)
T 3vl1_A 381 LVSNDDAVSQFCYVSDDESNGEVLEVG----KNNFCALYNLSN 419 (420)
T ss_dssp ECCSSCCCCEEEEECCSSSSCEEEEEE----TTTEEEEEESCC
T ss_pred EccCCcceEEEEEccCCCCcceEEEEc----CCceEEEEeccC
Confidence 001224456556655 66666 678899999864
No 115
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=59.39 E-value=1.1e+02 Score=28.13 Aligned_cols=121 Identities=12% Similarity=0.079 Sum_probs=68.7
Q ss_pred CceEEEEEeCCCCCCCEEEEEEcCCceeEEE---eC-CC-----cc--cCcceeEe--cCCeEEEEEecCC---CCCCeE
Q 046476 211 NGFIHWIITNPRKTKPVLAVFDVKEEKFDIV---KL-PD-----EV--RKHHDLIQ--AEEKLGVLDCDDF---RSKNKI 274 (376)
Q Consensus 211 ~G~lywl~~~~~~~~~~il~fDl~~e~~~~i---~~-P~-----~~--~~~~~L~~--~~g~L~~~~~~~~---~~~~~~ 274 (376)
+|.++|.+. .+.+.++|+.++.-..+ .+ .. .. .....+.. -+++|+++..... .....=
T Consensus 237 dG~~~~vs~-----~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~ 311 (386)
T 3sjl_D 237 AGRLVWPTY-----TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASR 311 (386)
T ss_dssp TTEEEEEBT-----TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEE
T ss_pred CCcEEEEeC-----CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCC
Confidence 799999777 67899999987753322 21 10 00 11112222 3567888754311 112357
Q ss_pred EEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCc-EEEEecccCCCcEEEEEeCCCCcEE-EEEECCc
Q 046476 275 RVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGE-ILLTEYKSSLVSRVFIYDLKTQERR-AIKIPPV 349 (376)
Q Consensus 275 ~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~-il~~~~~~~~~~~v~~ydl~t~~~~-~v~~~~~ 349 (376)
+||++|-. .+..+.+ |+-..- ...+++..+++ .++... ..++.|.+||.+|.++. .+...+.
T Consensus 312 ~V~viD~~------t~kv~~~-i~vg~~----~~~lavs~D~~~~ly~tn--~~~~~VsViD~~t~k~~~~i~~~~~ 375 (386)
T 3sjl_D 312 FVVVLDAK------TGERLAK-FEMGHE----IDSINVSQDEKPLLYALS--TGDKTLYIHDAESGEELRSVNQLGH 375 (386)
T ss_dssp EEEEEETT------TCCEEEE-EEEEEE----ECEEEECSSSSCEEEEEE--TTTTEEEEEETTTCCEEEEECCCCS
T ss_pred EEEEEECC------CCeEEEE-EECCCC----cceEEECCCCCeEEEEEc--CCCCeEEEEECCCCcEEEEecCCCC
Confidence 89999853 3555555 332111 13467777876 665532 14789999999988764 3433333
No 116
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=59.38 E-value=89 Score=27.14 Aligned_cols=102 Identities=10% Similarity=0.083 Sum_probs=55.2
Q ss_pred CCEEEEEEcCCceeEEE----eCCCcccCcceeEec-CCe-EEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEee
Q 046476 225 KPVLAVFDVKEEKFDIV----KLPDEVRKHHDLIQA-EEK-LGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFR 298 (376)
Q Consensus 225 ~~~il~fDl~~e~~~~i----~~P~~~~~~~~L~~~-~g~-L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~ 298 (376)
.+.|..||..+.+...+ ..|. .+... +|+ |+++... ...+.++-++.. .......... ++
T Consensus 164 ~g~v~~~d~~~~~~~~~~~~~~~p~------gia~~~dg~~lyv~d~~----~~~I~~~~~~~~---~~~~~~~~~~-~~ 229 (322)
T 2fp8_A 164 TGRLIKYDPSTKETTLLLKELHVPG------GAEVSADSSFVLVAEFL----SHQIVKYWLEGP---KKGTAEVLVK-IP 229 (322)
T ss_dssp CEEEEEEETTTTEEEEEEEEESCCC------EEEECTTSSEEEEEEGG----GTEEEEEESSST---TTTCEEEEEE-CS
T ss_pred CceEEEEeCCCCEEEEeccCCccCc------ceEECCCCCEEEEEeCC----CCeEEEEECCCC---cCCccceEEe-CC
Confidence 36799999988776544 2233 23333 554 7766554 344444433321 1122322212 11
Q ss_pred cccccccCcEeEEEccCCcEEEEeccc-------CCCcEEEEEeCCCCcEEEEEEC
Q 046476 299 FDTIMFRPPIPVSNSNNGEILLTEYKS-------SLVSRVFIYDLKTQERRAIKIP 347 (376)
Q Consensus 299 ~~~~~~~~~~~v~~~~~g~il~~~~~~-------~~~~~v~~ydl~t~~~~~v~~~ 347 (376)
. + .-+++..+|.+++..... .....|+.||++.+.++.+...
T Consensus 230 g-P------~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~ 278 (322)
T 2fp8_A 230 N-P------GNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLP 278 (322)
T ss_dssp S-E------EEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECC
T ss_pred C-C------CCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECC
Confidence 1 1 235667788888776210 0135799999988777777653
No 117
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=59.23 E-value=95 Score=27.43 Aligned_cols=132 Identities=8% Similarity=0.036 Sum_probs=66.5
Q ss_pred CCeEEEEEcCCCCeeecCCCCCcceecCCceEE--CceEEEEEeCCCCCCCEEEEEEcCCceeEEE-eCCCcccCcceeE
Q 046476 178 TPECEIFTLGTTSWRKIDAPPSRIHFRRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKEEKFDIV-KLPDEVRKHHDLI 254 (376)
Q Consensus 178 ~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i-~~P~~~~~~~~L~ 254 (376)
...+.+|+.+++.....-..... .-.++.+ +|.....+. .++.|..||+.+.+-..+ ...........+.
T Consensus 219 Dg~v~~wd~~~~~~~~~~~~h~~---~v~~v~~~p~~~~l~s~s----~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~ 291 (354)
T 2pbi_B 219 DKKAMVWDMRSGQCVQAFETHES---DVNSVRYYPSGDAFASGS----DDATCRLYDLRADREVAIYSKESIIFGASSVD 291 (354)
T ss_dssp TSCEEEEETTTCCEEEEECCCSS---CEEEEEECTTSSEEEEEE----TTSCEEEEETTTTEEEEEECCTTCCSCEEEEE
T ss_pred CCeEEEEECCCCcEEEEecCCCC---CeEEEEEeCCCCEEEEEe----CCCeEEEEECCCCcEEEEEcCCCcccceeEEE
Confidence 35677888777653221111000 1112222 454433333 267899999987654332 2211111111222
Q ss_pred -ecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEE
Q 046476 255 -QAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFI 333 (376)
Q Consensus 255 -~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ 333 (376)
..+|.+.++... ...+.||-+... ..... +..+.- ....+++.++|..+... +.++.|.+
T Consensus 292 ~s~~g~~l~~g~~----d~~i~vwd~~~~--------~~~~~-l~~h~~---~v~~l~~spdg~~l~sg---s~D~~v~v 352 (354)
T 2pbi_B 292 FSLSGRLLFAGYN----DYTINVWDVLKG--------SRVSI-LFGHEN---RVSTLRVSPDGTAFCSG---SWDHTLRV 352 (354)
T ss_dssp ECTTSSEEEEEET----TSCEEEEETTTC--------SEEEE-ECCCSS---CEEEEEECTTSSCEEEE---ETTSEEEE
T ss_pred EeCCCCEEEEEEC----CCcEEEEECCCC--------ceEEE-EECCCC---cEEEEEECCCCCEEEEE---cCCCCEEe
Confidence 236776666554 678999976532 12333 333221 23556777888766654 25777777
Q ss_pred Ee
Q 046476 334 YD 335 (376)
Q Consensus 334 yd 335 (376)
||
T Consensus 353 W~ 354 (354)
T 2pbi_B 353 WA 354 (354)
T ss_dssp EC
T ss_pred cC
Confidence 75
No 118
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=58.96 E-value=1.3e+02 Score=29.08 Aligned_cols=124 Identities=21% Similarity=0.269 Sum_probs=67.6
Q ss_pred cCCceEECceEEEEEeCCCCCCCEEEEEEcCC--ceeEEEe-CCCccc-----CcceeEecCCeEEEEEecCCCCCCeEE
Q 046476 204 RRQGLCANGFIHWIITNPRKTKPVLAVFDVKE--EKFDIVK-LPDEVR-----KHHDLIQAEEKLGVLDCDDFRSKNKIR 275 (376)
Q Consensus 204 ~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~--e~~~~i~-~P~~~~-----~~~~L~~~~g~L~~~~~~~~~~~~~~~ 275 (376)
...++..+|.+|..+. ...+.++|..+ +.|+.-. .|.... ....+...+|+|++...+ . .
T Consensus 61 ~~~P~v~~g~vyv~~~-----~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~d-----g--~ 128 (582)
T 1flg_A 61 ESQAIVSDGVIYVTAS-----YSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLD-----A--S 128 (582)
T ss_dssp CCCCEEETTEEEEEET-----TTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETT-----T--E
T ss_pred eeccEEECCEEEEEcC-----CCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCC-----C--E
Confidence 3567889999999876 35599999865 4666532 222110 112345567888776543 2 3
Q ss_pred EEEEccCCCCCCCceeEEEEEeeccccccc-CcEeEEEcc--CCc-EEEEecc---cCCCcEEEEEeCCCCcEEEE
Q 046476 276 VWILKDYGRGGGEVWIRRDYVFRFDTIMFR-PPIPVSNSN--NGE-ILLTEYK---SSLVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 276 IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~-~~~~v~~~~--~g~-il~~~~~---~~~~~~v~~ydl~t~~~~~v 344 (376)
|..|+-.. .+..|.... ......+. ...|+-... +|+ .++.... ...+..|+.+|++|.+..+.
T Consensus 129 l~AlD~~T--G~~~W~~~~---~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~ 199 (582)
T 1flg_A 129 VVALNKNT--GKVVWKKKF---ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWM 199 (582)
T ss_dssp EEEEESSS--CCEEEEEEC---SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEE
T ss_pred EEEEECCC--CCEEeeecC---CCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEee
Confidence 56665321 366787642 22110001 113443222 232 3333210 01267899999999988764
No 119
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=58.67 E-value=90 Score=26.96 Aligned_cols=206 Identities=13% Similarity=0.032 Sum_probs=102.3
Q ss_pred cccccceEEEEEecCcEEEEEecCCcceec-CCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCC
Q 046476 87 TQLINGFICFYNIVGFEILMRNVVTQEIID-LPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTN 165 (376)
Q Consensus 87 ~~s~nGLl~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~ 165 (376)
+...+..+.+.......+.++|+.|++... ++......+ ....+ ....++.++|..+. ++... ..
T Consensus 96 ~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~----~~~~~----~~~~~~~~s~dg~~--l~~~~-~~--- 161 (353)
T 3vgz_A 96 INNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRT----EEVRP----LQPRELVADDATNT--VYISG-IG--- 161 (353)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCC----SSCCC----CEEEEEEEETTTTE--EEEEE-ES---
T ss_pred ECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccc----cccCC----CCCceEEECCCCCE--EEEEe-cC---
Confidence 333444455554456789999999987643 333211110 00010 23556777775442 22211 11
Q ss_pred CCcccceecCCCCCeEEEEEcCCCCeee-cCCCCCcceecCCceEECceEEEEEeCCCCCCCEEEEEEcCCceeE-EEeC
Q 046476 166 SSSYAWMIDNHGTPECEIFTLGTTSWRK-IDAPPSRIHFRRQGLCANGFIHWIITNPRKTKPVLAVFDVKEEKFD-IVKL 243 (376)
Q Consensus 166 ~~~~~~~~~~~~~~~~~vys~~t~~Wr~-~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~-~i~~ 243 (376)
....+.+++..++.-.. +..... ....-.+.-+|...+.+.. .+.|..+|+.+.+.. .++.
T Consensus 162 -----------~~~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~----~~~i~~~d~~~~~~~~~~~~ 224 (353)
T 3vgz_A 162 -----------KESVIWVVDGGNIKLKTAIQNTGK--MSTGLALDSEGKRLYTTNA----DGELITIDTADNKILSRKKL 224 (353)
T ss_dssp -----------SSCEEEEEETTTTEEEEEECCCCT--TCCCCEEETTTTEEEEECT----TSEEEEEETTTTEEEEEEEC
T ss_pred -----------CCceEEEEcCCCCceEEEecCCCC--ccceEEECCCCCEEEEEcC----CCeEEEEECCCCeEEEEEEc
Confidence 13567888887754222 221100 0011122235654444431 678999999987654 4455
Q ss_pred CCcc--cCcceeEec-CC-eEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEE
Q 046476 244 PDEV--RKHHDLIQA-EE-KLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEIL 319 (376)
Q Consensus 244 P~~~--~~~~~L~~~-~g-~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il 319 (376)
+... .....+... +| .|++.... ...+.+|-++. ..-. .. ++... ...+++..+|+.+
T Consensus 225 ~~~~~~~~~~~~~~s~dg~~l~~~~~~----~~~v~~~d~~~------~~~~--~~-~~~~~-----~~~~~~s~dg~~l 286 (353)
T 3vgz_A 225 LDDGKEHFFINISLDTARQRAFITDSK----AAEVLVVDTRN------GNIL--AK-VAAPE-----SLAVLFNPARNEA 286 (353)
T ss_dssp CCSSSCCCEEEEEEETTTTEEEEEESS----SSEEEEEETTT------CCEE--EE-EECSS-----CCCEEEETTTTEE
T ss_pred CCCCCCcccceEEECCCCCEEEEEeCC----CCEEEEEECCC------CcEE--EE-EEcCC-----CceEEECCCCCEE
Confidence 3321 111123322 45 46555433 56777775442 1222 22 22111 1235667787744
Q ss_pred EEecccCCCcEEEEEeCCCCcEEE
Q 046476 320 LTEYKSSLVSRVFIYDLKTQERRA 343 (376)
Q Consensus 320 ~~~~~~~~~~~v~~ydl~t~~~~~ 343 (376)
+... ..++.+.+||+++.+...
T Consensus 287 ~v~~--~~~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 287 YVTH--RQAGKVSVIDAKSYKVVK 308 (353)
T ss_dssp EEEE--TTTTEEEEEETTTTEEEE
T ss_pred EEEE--CCCCeEEEEECCCCeEEE
Confidence 4331 247899999999887654
No 120
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=58.66 E-value=1e+02 Score=27.66 Aligned_cols=111 Identities=12% Similarity=0.073 Sum_probs=61.9
Q ss_pred CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcc----cCcceeEe-cCCeEEEEEecCCCCCCeEEEEEEccCCCC
Q 046476 211 NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEV----RKHHDLIQ-AEEKLGVLDCDDFRSKNKIRVWILKDYGRG 285 (376)
Q Consensus 211 ~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~----~~~~~L~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g 285 (376)
+|.++..+. ..+.|..+|+.+.+......+... .....+.. -+|.+.+.... ...+.+|-++..
T Consensus 133 ~~~~~~~~~----~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~----d~~v~~~d~~~~--- 201 (433)
T 3bws_A 133 NTRLAIPLL----EDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQ----ANAVHVFDLKTL--- 201 (433)
T ss_dssp SSEEEEEBT----TSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGG----GTEEEEEETTTC---
T ss_pred CCeEEEEeC----CCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECC----CCEEEEEECCCc---
Confidence 455555443 145699999998776543222111 11112222 36777666654 678999976532
Q ss_pred CCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEEE
Q 046476 286 GGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERRA 343 (376)
Q Consensus 286 ~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~~ 343 (376)
+ .... +..... ....+++..++..++... ..++.+.+||+++++...
T Consensus 202 -~----~~~~-~~~~~~---~~~~~~~~~~~~~l~~~~--~~~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 202 -A----YKAT-VDLTGK---WSKILLYDPIRDLVYCSN--WISEDISVIDRKTKLEIR 248 (433)
T ss_dssp -C----EEEE-EECSSS---SEEEEEEETTTTEEEEEE--TTTTEEEEEETTTTEEEE
T ss_pred -e----EEEE-EcCCCC---CeeEEEEcCCCCEEEEEe--cCCCcEEEEECCCCcEEE
Confidence 1 2223 332211 124456667777665431 146789999998876643
No 121
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=58.45 E-value=91 Score=26.94 Aligned_cols=32 Identities=13% Similarity=-0.017 Sum_probs=22.6
Q ss_pred EeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEE
Q 046476 308 IPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERR 342 (376)
Q Consensus 308 ~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~ 342 (376)
..+++.+++..++... .++.|.+||+++++..
T Consensus 277 ~~~~~sp~~~~l~s~~---~dg~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 277 NGIAFHPVHGTLATVG---SDGRFSFWDKDARTKL 308 (368)
T ss_dssp EEEEECTTTCCEEEEE---TTSCEEEEETTTTEEE
T ss_pred EEEEEecCCCEEEEEc---cCCeEEEEECCCCcEE
Confidence 4456677777665542 6888999999987654
No 122
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=58.24 E-value=96 Score=27.19 Aligned_cols=102 Identities=14% Similarity=0.168 Sum_probs=54.1
Q ss_pred CCEEEEEEcCCceeEEEe-CCCcccCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccc
Q 046476 225 KPVLAVFDVKEEKFDIVK-LPDEVRKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTI 302 (376)
Q Consensus 225 ~~~il~fDl~~e~~~~i~-~P~~~~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~ 302 (376)
++.+..+|+.++.+..+. +......-..+.-. +|.+.+.... ...+.||-++.. ..+..... +..+..
T Consensus 82 D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~----D~~v~iwd~~~~-----~~~~~~~~-~~~h~~ 151 (345)
T 3fm0_A 82 DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSR----DKSVWVWEVDEE-----DEYECVSV-LNSHTQ 151 (345)
T ss_dssp TSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEET----TSCEEEEEECTT-----SCEEEEEE-ECCCCS
T ss_pred CCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEEC----CCeEEEEECCCC-----CCeEEEEE-ecCcCC
Confidence 567888888877665432 22211111222222 5665555544 678999998753 33444444 333221
Q ss_pred cccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEE
Q 046476 303 MFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERR 342 (376)
Q Consensus 303 ~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~ 342 (376)
....+++.+++.+++.. +.++.+.+||.+++++.
T Consensus 152 ---~v~~~~~~p~~~~l~s~---s~d~~i~~w~~~~~~~~ 185 (345)
T 3fm0_A 152 ---DVKHVVWHPSQELLASA---SYDDTVKLYREEEDDWV 185 (345)
T ss_dssp ---CEEEEEECSSSSCEEEE---ETTSCEEEEEEETTEEE
T ss_pred ---CeEEEEECCCCCEEEEE---eCCCcEEEEEecCCCEE
Confidence 22445556666655543 15667777777766543
No 123
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=58.01 E-value=96 Score=27.07 Aligned_cols=143 Identities=12% Similarity=0.151 Sum_probs=68.9
Q ss_pred CCeEEEEEcCCCCeeecCCCCCcceecCCceEE--CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCC-cccCcceeE
Q 046476 178 TPECEIFTLGTTSWRKIDAPPSRIHFRRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPD-EVRKHHDLI 254 (376)
Q Consensus 178 ~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~-~~~~~~~L~ 254 (376)
...+.+|+..++.-........ ...-.++.+ +|.+...+. .++.|..||+.+.+.....+.. ....-..+.
T Consensus 148 dg~i~~wd~~~~~~~~~~~~~~--~~~i~~~~~~pdg~~lasg~----~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~ 221 (343)
T 3lrv_A 148 RGTIGFQSYEDDSQYIVHSAKS--DVEYSSGVLHKDSLLLALYS----PDGILDVYNLSSPDQASSRFPVDEEAKIKEVK 221 (343)
T ss_dssp TCCEEEEESSSSCEEEEECCCS--SCCCCEEEECTTSCEEEEEC----TTSCEEEEESSCTTSCCEECCCCTTSCEEEEE
T ss_pred CCcEEEEECCCCcEEEEEecCC--CCceEEEEECCCCCEEEEEc----CCCEEEEEECCCCCCCccEEeccCCCCEEEEE
Confidence 3567788887765422211100 001111222 455444433 2678999999987654222222 111222232
Q ss_pred ec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeec---ccccccCcEeEEEccCCcEEEEecccCCCcE
Q 046476 255 QA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRF---DTIMFRPPIPVSNSNNGEILLTEYKSSLVSR 330 (376)
Q Consensus 255 ~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~---~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~ 330 (376)
-. +|...+...+ . .+.||-+.... .. .. +.. ....... ..+++..+|..++... ..+..
T Consensus 222 fs~~g~~l~s~~~----~-~v~iwd~~~~~----~~----~~-~~~~~~~~~~~~~-~~~~~~~~g~~l~~~s--~~d~~ 284 (343)
T 3lrv_A 222 FADNGYWMVVECD----Q-TVVCFDLRKDV----GT----LA-YPTYTIPEFKTGT-VTYDIDDSGKNMIAYS--NESNS 284 (343)
T ss_dssp ECTTSSEEEEEES----S-BEEEEETTSST----TC----BS-SCCCBC-----CC-EEEEECTTSSEEEEEE--TTTTE
T ss_pred EeCCCCEEEEEeC----C-eEEEEEcCCCC----cc----ee-ecccccccccccc-eEEEECCCCCEEEEec--CCCCc
Confidence 22 5555444433 3 89999876531 11 11 111 1110111 2367778888877641 13677
Q ss_pred EEEEeC--CCCcEEE
Q 046476 331 VFIYDL--KTQERRA 343 (376)
Q Consensus 331 v~~ydl--~t~~~~~ 343 (376)
+.+||. .++.|+.
T Consensus 285 i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 285 LTIYKFDKKTKNWTK 299 (343)
T ss_dssp EEEEEECTTTCSEEE
T ss_pred EEEEEEcccccceEe
Confidence 888877 4455664
No 124
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=57.26 E-value=1.6e+02 Score=29.39 Aligned_cols=98 Identities=14% Similarity=0.222 Sum_probs=57.8
Q ss_pred CCEEEEEEcCCceeEEEe-CCCcccCcceeEec-C--CeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecc
Q 046476 225 KPVLAVFDVKEEKFDIVK-LPDEVRKHHDLIQA-E--EKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFD 300 (376)
Q Consensus 225 ~~~il~fDl~~e~~~~i~-~P~~~~~~~~L~~~-~--g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~ 300 (376)
++.|..||+.+++...+. +......-..+.-. + |.+.+.... ...+.||-++. ..|..... +..+
T Consensus 30 dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~----Dg~I~vwd~~~------~~~~~~~~-~~~h 98 (753)
T 3jro_A 30 DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY----DGKVLIWKEEN------GRWSQIAV-HAVH 98 (753)
T ss_dssp TTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEET----TSCEEEEEEET------TEEEEEEE-ECCC
T ss_pred CCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeC----CCeEEEEECCC------Cccccccc-ccCC
Confidence 678999999866665542 22211112223322 2 555555544 67899998874 34666666 4433
Q ss_pred cccccCcEeEEEccC--CcEEEEecccCCCcEEEEEeCCCC
Q 046476 301 TIMFRPPIPVSNSNN--GEILLTEYKSSLVSRVFIYDLKTQ 339 (376)
Q Consensus 301 ~~~~~~~~~v~~~~~--g~il~~~~~~~~~~~v~~ydl~t~ 339 (376)
.. ....+++.++ +.+++... .++.+.+||++++
T Consensus 99 ~~---~V~~v~~sp~~~~~~l~sgs---~dg~I~vwdl~~~ 133 (753)
T 3jro_A 99 SA---SVNSVQWAPHEYGPLLLVAS---SDGKVSVVEFKEN 133 (753)
T ss_dssp SS---CEEEEEECCGGGCSEEEEEE---TTSEEEEEECCSS
T ss_pred CC---CeEEEEECCCCCCCEEEEEe---CCCcEEEEEeecC
Confidence 22 2245566665 66665542 6889999999877
No 125
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=57.09 E-value=69 Score=27.82 Aligned_cols=73 Identities=14% Similarity=0.147 Sum_probs=0.0
Q ss_pred CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeC
Q 046476 257 EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDL 336 (376)
Q Consensus 257 ~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl 336 (376)
++.+.+.... ...+.||-+... +...-..... +..+.- ....+++..+|..++.. +.++.+.+||+
T Consensus 29 ~~~~l~s~s~----D~~v~~W~~~~~---~~~~~~~~~~-~~~h~~---~v~~~~~s~dg~~l~s~---s~D~~v~~wd~ 94 (319)
T 3frx_A 29 QPNLLLSASR----DKTLISWKLTGD---DQKFGVPVRS-FKGHSH---IVQDCTLTADGAYALSA---SWDKTLRLWDV 94 (319)
T ss_dssp CTTEEEEEET----TSEEEEEEEEEE---TTEEEEEEEE-EECCSS---CEEEEEECTTSSEEEEE---ETTSEEEEEET
T ss_pred CccEEEEecC----CccEEEecCCCC---CccccccceE-EeCCcc---cEEEEEECCCCCEEEEE---eCCCEEEEEEC
Q ss_pred CCCcEEE
Q 046476 337 KTQERRA 343 (376)
Q Consensus 337 ~t~~~~~ 343 (376)
++++...
T Consensus 95 ~~~~~~~ 101 (319)
T 3frx_A 95 ATGETYQ 101 (319)
T ss_dssp TTTEEEE
T ss_pred CCCCeeE
No 126
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=56.31 E-value=1.2e+02 Score=27.50 Aligned_cols=87 Identities=16% Similarity=0.137 Sum_probs=50.5
Q ss_pred eEEEeCCCcc-cCcceeEec--CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEcc
Q 046476 238 FDIVKLPDEV-RKHHDLIQA--EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSN 314 (376)
Q Consensus 238 ~~~i~~P~~~-~~~~~L~~~--~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~ 314 (376)
++.+..|.-. ..+..|+.. ++.|++. . ..++.||-++. ..-.+... +..+.- ....+++.+
T Consensus 94 ~~~l~ap~~~~d~y~~~l~wS~~n~lAvg-l-----d~tV~lWd~~t------g~~~~~~~-~~~~~~---~V~sv~fsp 157 (420)
T 4gga_A 94 DRILDAPEIRNDYYLNLVDWSSGNVLAVA-L-----DNSVYLWSASS------GDILQLLQ-MEQPGE---YISSVAWIK 157 (420)
T ss_dssp SEEEECTTCCCCTTCBCEEECTTSEEEEE-E-----TTEEEEEETTT------CCEEEEEE-CCSTTC---CEEEEEECT
T ss_pred ceEEECCCCcccccceeEEECCCCEEEEE-e-----CCEEEEEECCC------CCEEEEEE-ecCCCC---cEEEEEECC
Confidence 3445566544 344455544 4444433 2 57899996553 23444444 332221 235667778
Q ss_pred CCcEEEEecccCCCcEEEEEeCCCCcEEE
Q 046476 315 NGEILLTEYKSSLVSRVFIYDLKTQERRA 343 (376)
Q Consensus 315 ~g~il~~~~~~~~~~~v~~ydl~t~~~~~ 343 (376)
+|..++... .++.|.+||+++++...
T Consensus 158 dg~~lasgs---~Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 158 EGNYLAVGT---SSAEVQLWDVQQQKRLR 183 (420)
T ss_dssp TSSEEEEEE---TTSCEEEEETTTTEEEE
T ss_pred CCCEEEEEE---CCCeEEEEEcCCCcEEE
Confidence 888776542 68889999999886643
No 127
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=55.00 E-value=1.5e+02 Score=28.54 Aligned_cols=122 Identities=11% Similarity=0.050 Sum_probs=67.3
Q ss_pred cCCceEECceEEEEEeCCCCCCCEEEEEEc-CC--ceeEEEeCCCc--c-------cCcceeEecCCeEEEEEecCCCCC
Q 046476 204 RRQGLCANGFIHWIITNPRKTKPVLAVFDV-KE--EKFDIVKLPDE--V-------RKHHDLIQAEEKLGVLDCDDFRSK 271 (376)
Q Consensus 204 ~~~~v~~~G~lywl~~~~~~~~~~il~fDl-~~--e~~~~i~~P~~--~-------~~~~~L~~~~g~L~~~~~~~~~~~ 271 (376)
...++..+|.+|..+. ..+.+.++|. .+ +.|+. +++.. . .....+...+|+|++...+
T Consensus 55 ~~~P~v~~g~vyv~~~----~~~~v~AlD~~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d----- 124 (571)
T 2ad6_A 55 EGAPLVIGDMMYVHSA----FPNNTYALNLNDPGKIVWQH-KPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN----- 124 (571)
T ss_dssp CSCCEEETTEEEEECS----TTTCEEEEETTCTTSEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT-----
T ss_pred ccccEEECCEEEEEeC----CCCEEEEEeCCCCccEEEEE-cCCCCccccccccccccccccEEECCEEEEEeCC-----
Confidence 3567888999998754 0357999998 65 45654 22221 0 0122345668888776533
Q ss_pred CeEEEEEEccCCCCCCCceeEEEEEeeccccccc-CcEeEEEccCCcEEEEecc--cCCCcEEEEEeCCCCcEEEE
Q 046476 272 NKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFR-PPIPVSNSNNGEILLTEYK--SSLVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 272 ~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~-~~~~v~~~~~g~il~~~~~--~~~~~~v~~ydl~t~~~~~v 344 (376)
. .|..|+-.. .+..|.... +....... ...|+. .++.|++.... ...++.|++||++|.+..+-
T Consensus 125 g--~l~alD~~t--G~~~W~~~~---~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 191 (571)
T 2ad6_A 125 G--HLLALDAKT--GKINWEVEV---CDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWR 191 (571)
T ss_dssp S--EEEEEETTT--CCEEEEEEC---CCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred C--EEEEEECCC--CCEEEEecC---CCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEE
Confidence 2 355666321 356787642 22111001 113433 25666665410 00157999999999887754
No 128
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=54.81 E-value=99 Score=26.25 Aligned_cols=113 Identities=11% Similarity=0.072 Sum_probs=60.5
Q ss_pred CceEEEE--------EeCCCCCCCEEEEEEcCCceeEEEeCCCcc---cCcceeEec-C-CeEEEEEecCCCCCCeEEEE
Q 046476 211 NGFIHWI--------ITNPRKTKPVLAVFDVKEEKFDIVKLPDEV---RKHHDLIQA-E-EKLGVLDCDDFRSKNKIRVW 277 (376)
Q Consensus 211 ~G~lywl--------~~~~~~~~~~il~fDl~~e~~~~i~~P~~~---~~~~~L~~~-~-g~L~~~~~~~~~~~~~~~IW 277 (376)
+|.+|+. .. .+.|..||+.+.++..+..|... .....+... + |.|.++... .. |+
T Consensus 28 ~g~l~~~~~~~~~~~~~-----~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-----~~--l~ 95 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKP-----AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-----LG--LL 95 (314)
T ss_dssp TSCEEEEETTCEETTEE-----CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-----TE--EE
T ss_pred CCCEEEEEeccccCCCC-----CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-----CC--EE
Confidence 5888887 33 67899999999888877654211 122234333 5 788777642 23 44
Q ss_pred EEccCCCCCCCceeEE-EEEeecccccccCcEeEEEccCCcEEEEeccc------------CCCcEEEEEeCCCCcEEE
Q 046476 278 ILKDYGRGGGEVWIRR-DYVFRFDTIMFRPPIPVSNSNNGEILLTEYKS------------SLVSRVFIYDLKTQERRA 343 (376)
Q Consensus 278 ~l~~~~~g~~~~W~~~-~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~------------~~~~~v~~ydl~t~~~~~ 343 (376)
+++..+ ..... .. .. ..........+++..+|.+++..... .....++.||++ ++++.
T Consensus 96 ~~d~~g-----~~~~~~~~-~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~ 166 (314)
T 1pjx_A 96 VVQTDG-----TFEEIAKK-DS-EGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ 166 (314)
T ss_dssp EEETTS-----CEEECCSB-CT-TSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE
T ss_pred EEeCCC-----CEEEEEec-cC-CCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE
Confidence 444212 12111 11 01 01101112346777788888876210 001579999987 55544
No 129
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=54.41 E-value=96 Score=25.98 Aligned_cols=193 Identities=13% Similarity=0.147 Sum_probs=95.2
Q ss_pred ccccceEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCC
Q 046476 88 QLINGFICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSS 167 (376)
Q Consensus 88 ~s~nGLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~ 167 (376)
...+|.|.+.+.....+.++++.++....+-.... ....++.+|+..+.. .....
T Consensus 44 d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~----------------~~p~~ia~d~~~~~l--yv~d~------- 98 (267)
T 1npe_A 44 DCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL----------------GSPEGIALDHLGRTI--FWTDS------- 98 (267)
T ss_dssp ETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC----------------CCEEEEEEETTTTEE--EEEET-------
T ss_pred ecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC----------------CCccEEEEEecCCeE--EEEEC-------
Confidence 33456666655455677788877664432211111 134566777754432 22111
Q ss_pred cccceecCCCCCeEEEEEcCCCCeeecCCCCCcceecCCceEE---CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCC
Q 046476 168 SYAWMIDNHGTPECEIFTLGTTSWRKIDAPPSRIHFRRQGLCA---NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLP 244 (376)
Q Consensus 168 ~~~~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P 244 (376)
....+.+++.....-+.+.... .....++.+ +|.+||... ......|..++++......+...
T Consensus 99 ---------~~~~I~~~~~~g~~~~~~~~~~---~~~P~~i~vd~~~g~lyv~~~--~~~~~~I~~~~~dg~~~~~~~~~ 164 (267)
T 1npe_A 99 ---------QLDRIEVAKMDGTQRRVLFDTG---LVNPRGIVTDPVRGNLYWTDW--NRDNPKIETSHMDGTNRRILAQD 164 (267)
T ss_dssp ---------TTTEEEEEETTSCSCEEEECSS---CSSEEEEEEETTTTEEEEEEC--CSSSCEEEEEETTSCCCEEEECT
T ss_pred ---------CCCEEEEEEcCCCCEEEEEECC---CCCccEEEEeeCCCEEEEEEC--CCCCcEEEEEecCCCCcEEEEEC
Confidence 1346677776653322221110 011223333 589999875 11136888999876554444211
Q ss_pred CcccCcceeEe--cCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEcc-CCcEEEE
Q 046476 245 DEVRKHHDLIQ--AEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSN-NGEILLT 321 (376)
Q Consensus 245 ~~~~~~~~L~~--~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~-~g~il~~ 321 (376)
.......+.. -++.|+++... .. .|++++-.+ . ....++.. .. .|.++.. ++.+++.
T Consensus 165 -~~~~P~gia~d~~~~~lyv~d~~----~~--~I~~~~~~g---~----~~~~~~~~----~~--~P~gi~~d~~~lyva 224 (267)
T 1npe_A 165 -NLGLPNGLTFDAFSSQLCWVDAG----TH--RAECLNPAQ---P----GRRKVLEG----LQ--YPFAVTSYGKNLYYT 224 (267)
T ss_dssp -TCSCEEEEEEETTTTEEEEEETT----TT--EEEEEETTE---E----EEEEEEEC----CC--SEEEEEEETTEEEEE
T ss_pred -CCCCCcEEEEcCCCCEEEEEECC----CC--EEEEEecCC---C----ceEEEecC----CC--CceEEEEeCCEEEEE
Confidence 1111222333 35688888754 34 355555321 1 11121221 12 3443322 4667666
Q ss_pred ecccCCCcEEEEEeCCCCcEE
Q 046476 322 EYKSSLVSRVFIYDLKTQERR 342 (376)
Q Consensus 322 ~~~~~~~~~v~~ydl~t~~~~ 342 (376)
.. ..+.|..+|+++.+..
T Consensus 225 ~~---~~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 225 DW---KTNSVIAMDLAISKEM 242 (267)
T ss_dssp ET---TTTEEEEEETTTTEEE
T ss_pred EC---CCCeEEEEeCCCCCce
Confidence 52 4679999999977654
No 130
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=54.14 E-value=1.7e+02 Score=28.89 Aligned_cols=98 Identities=10% Similarity=0.065 Sum_probs=50.4
Q ss_pred CCEEEEEEcCCc-eeEE-EeCCCcccCcceeEec--CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecc
Q 046476 225 KPVLAVFDVKEE-KFDI-VKLPDEVRKHHDLIQA--EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFD 300 (376)
Q Consensus 225 ~~~il~fDl~~e-~~~~-i~~P~~~~~~~~L~~~--~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~ 300 (376)
++.|..||+.+. .... +..... ....+.-. +|.+.++... ...+.+|-++.. ....... ...
T Consensus 118 dg~i~vw~~~~~~~~~~~~~~~~~--~v~~~~~~p~~~~~l~~~~~----dg~v~vwd~~~~----~~~~~~~----~~~ 183 (814)
T 3mkq_A 118 DLTVKLWNWENNWALEQTFEGHEH--FVMCVAFNPKDPSTFASGCL----DRTVKVWSLGQS----TPNFTLT----TGQ 183 (814)
T ss_dssp TSEEEEEEGGGTSEEEEEEECCSS--CEEEEEEETTEEEEEEEEET----TSEEEEEETTCS----SCSEEEE----CCC
T ss_pred CCEEEEEECCCCceEEEEEcCCCC--cEEEEEEEcCCCCEEEEEeC----CCeEEEEECCCC----cceeEEe----cCC
Confidence 678999999875 3322 222111 11222222 4555454444 678999987543 2222211 111
Q ss_pred cccccCcEeEEEcc--CCcEEEEecccCCCcEEEEEeCCCCcEE
Q 046476 301 TIMFRPPIPVSNSN--NGEILLTEYKSSLVSRVFIYDLKTQERR 342 (376)
Q Consensus 301 ~~~~~~~~~v~~~~--~g~il~~~~~~~~~~~v~~ydl~t~~~~ 342 (376)
.. ....+++.. ++..++.. ..++.+.+||+++++..
T Consensus 184 ~~---~v~~~~~~~~~~~~~l~~~---~~dg~i~~~d~~~~~~~ 221 (814)
T 3mkq_A 184 ER---GVNYVDYYPLPDKPYMITA---SDDLTIKIWDYQTKSCV 221 (814)
T ss_dssp TT---CCCEEEECCSTTCCEEEEE---CTTSEEEEEETTTTEEE
T ss_pred CC---CEEEEEEEECCCCCEEEEE---eCCCEEEEEECCCCcEE
Confidence 11 113344444 66655554 26778888998877643
No 131
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=53.92 E-value=1.3e+02 Score=27.32 Aligned_cols=117 Identities=12% Similarity=0.179 Sum_probs=58.6
Q ss_pred eEECceEEEEEeCCCCCCCEEEEEEcCCcee-EEEeCCCcccCcceeEecCCeEEEEEecCCCCCCeEEEEEEccCCCCC
Q 046476 208 LCANGFIHWIITNPRKTKPVLAVFDVKEEKF-DIVKLPDEVRKHHDLIQAEEKLGVLDCDDFRSKNKIRVWILKDYGRGG 286 (376)
Q Consensus 208 v~~~G~lywl~~~~~~~~~~il~fDl~~e~~-~~i~~P~~~~~~~~L~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~ 286 (376)
+..+|.....+. .++.|..||+.+.+. ..+..+........-+..++.+.++... ...+.||-++..
T Consensus 325 ~~~~~~~l~~~~----~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~----dg~v~iwd~~~~---- 392 (445)
T 2ovr_B 325 MELKDNILVSGN----ADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSD----DGTVKLWDLKTG---- 392 (445)
T ss_dssp EEEETTEEEEEE----TTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEET----TSEEEEEETTTC----
T ss_pred EEEeCCEEEEEe----CCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeC----CCeEEEEECCCC----
Confidence 334555444333 167899999987554 4444443221222223335665555544 689999977642
Q ss_pred CCceeEEEEEeecccccccCcEeEEEccCCcEEEEecc-cCCCcEEEEEeCCCC
Q 046476 287 GEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYK-SSLVSRVFIYDLKTQ 339 (376)
Q Consensus 287 ~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~-~~~~~~v~~ydl~t~ 339 (376)
.............. -.....+++.+++.++..... -.....+.+||.+..
T Consensus 393 --~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 393 --EFIRNLVTLESGGS-GGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp --CEEEEEEECTTGGG-TCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred --ceeeeeeccccCCC-CceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 22222210111111 012234566667776665411 011335999998754
No 132
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=53.85 E-value=1.1e+02 Score=26.65 Aligned_cols=196 Identities=9% Similarity=0.012 Sum_probs=101.3
Q ss_pred cceEEEEEecCcEEEEEecCCcce-ecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcc
Q 046476 91 NGFICFYNIVGFEILMRNVVTQEI-IDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSY 169 (376)
Q Consensus 91 nGLl~~~~~~~~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~ 169 (376)
++-+.+.......+.|+|+.|++. ..+|... ...++.+++. . ++..... .
T Consensus 53 ~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~------------------~p~~i~~~~~--g-~lyv~~~-~------- 103 (328)
T 3dsm_A 53 DGIGWIVVNNSHVIFAIDINTFKEVGRITGFT------------------SPRYIHFLSD--E-KAYVTQI-W------- 103 (328)
T ss_dssp TTEEEEEEGGGTEEEEEETTTCCEEEEEECCS------------------SEEEEEEEET--T-EEEEEEB-S-------
T ss_pred CCEEEEEEcCCCEEEEEECcccEEEEEcCCCC------------------CCcEEEEeCC--C-eEEEEEC-C-------
Confidence 444544443567899999999887 4464321 2233334332 2 3333321 1
Q ss_pred cceecCCCCCeEEEEEcCCCCee-ecCCCCC--cceecCCceEECceEEEEEeCCCCCCCEEEEEEcCCceeE-EEeCCC
Q 046476 170 AWMIDNHGTPECEIFTLGTTSWR-KIDAPPS--RIHFRRQGLCANGFIHWIITNPRKTKPVLAVFDVKEEKFD-IVKLPD 245 (376)
Q Consensus 170 ~~~~~~~~~~~~~vys~~t~~Wr-~~~~~~~--~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~-~i~~P~ 245 (376)
...+.+++..+++-. .++.... .......-+..+|.+|.... +....|..+|+++.+.. .++...
T Consensus 104 --------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~---~~~~~v~viD~~t~~~~~~i~~g~ 172 (328)
T 3dsm_A 104 --------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCW---SYQNRILKIDTETDKVVDELTIGI 172 (328)
T ss_dssp --------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEEC---TTCCEEEEEETTTTEEEEEEECSS
T ss_pred --------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcC---CCCCEEEEEECCCCeEEEEEEcCC
Confidence 467788888886532 2221100 00011112235677776653 12578999999987654 455433
Q ss_pred cccCcceeEecCCeEEEEEecCCCCC----CeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEE
Q 046476 246 EVRKHHDLIQAEEKLGVLDCDDFRSK----NKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLT 321 (376)
Q Consensus 246 ~~~~~~~L~~~~g~L~~~~~~~~~~~----~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~ 321 (376)
.. ......-+|+|+++........ ..-.|++++.. ...-.+... ++... ....+++..+++.++.
T Consensus 173 ~p--~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~----t~~v~~~~~-~~~g~----~p~~la~~~d~~~lyv 241 (328)
T 3dsm_A 173 QP--TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE----TFTVEKQFK-FKLGD----WPSEVQLNGTRDTLYW 241 (328)
T ss_dssp CB--CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT----TTEEEEEEE-CCTTC----CCEEEEECTTSCEEEE
T ss_pred Cc--cceEEcCCCCEEEEECCCccCCccccCCceEEEEECC----CCeEEEEEe-cCCCC----CceeEEEecCCCEEEE
Confidence 21 1122334789887765410000 01345555532 223333322 22111 1245677777777766
Q ss_pred ecccCCCcEEEEEeCCCCcEE
Q 046476 322 EYKSSLVSRVFIYDLKTQERR 342 (376)
Q Consensus 322 ~~~~~~~~~v~~ydl~t~~~~ 342 (376)
. .. .++.+|++++++.
T Consensus 242 ~----~~-~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 242 I----NN-DIWRMPVEADRVP 257 (328)
T ss_dssp E----SS-SEEEEETTCSSCC
T ss_pred E----cc-EEEEEECCCCcee
Confidence 5 23 8999999988763
No 133
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=53.30 E-value=1.2e+02 Score=26.79 Aligned_cols=63 Identities=14% Similarity=0.094 Sum_probs=40.5
Q ss_pred CCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEEEE
Q 046476 271 KNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 271 ~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~~v 344 (376)
...+.||-++.. +........ ...+.- ....+++..+|..++.. +.++.|.+||+++++....
T Consensus 102 dg~v~lWd~~~~----~~~~~~~~~-~~~H~~---~V~~v~~spdg~~l~sg---s~d~~i~iwd~~~~~~~~~ 164 (344)
T 4gqb_B 102 SGAVELWELDEN----ETLIVSKFC-KYEHDD---IVSTVSVLSSGTQAVSG---SKDICIKVWDLAQQVVLSS 164 (344)
T ss_dssp TSEEEEEEECTT----SSCEEEEEE-EECCSS---CEEEEEECTTSSEEEEE---ETTSCEEEEETTTTEEEEE
T ss_pred CCEEEEEeccCC----CceeEeecc-ccCCCC---CEEEEEECCCCCEEEEE---eCCCeEEEEECCCCcEEEE
Confidence 678999988753 333444333 222221 23567778888877765 2678899999998876543
No 134
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=53.01 E-value=1.3e+02 Score=26.97 Aligned_cols=101 Identities=11% Similarity=0.078 Sum_probs=57.0
Q ss_pred CCEEEEEEcCCceeE-EEeCCCcccCcceeEe-cCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccc
Q 046476 225 KPVLAVFDVKEEKFD-IVKLPDEVRKHHDLIQ-AEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTI 302 (376)
Q Consensus 225 ~~~il~fDl~~e~~~-~i~~P~~~~~~~~L~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~ 302 (376)
++.|..||+.+.+.. .+..+.. ...+.- -+|...++... .....+.||-++.. ...+... +..+..
T Consensus 283 d~~i~i~d~~~~~~~~~~~~~~~---v~~~~~s~~~~~l~~~~g--~~dg~i~v~~~~~~------~~~~~~~-~~~h~~ 350 (401)
T 4aez_A 283 DKQIHFWNAATGARVNTVDAGSQ---VTSLIWSPHSKEIMSTHG--FPDNNLSIWSYSSS------GLTKQVD-IPAHDT 350 (401)
T ss_dssp TCEEEEEETTTCCEEEEEECSSC---EEEEEECSSSSEEEEEEC--TTTCEEEEEEEETT------EEEEEEE-EECCSS
T ss_pred CCEEEEEECCCCCEEEEEeCCCc---EEEEEECCCCCeEEEEee--cCCCcEEEEecCCc------cceeEEE-ecCCCC
Confidence 678889998876543 3333221 122222 25555444321 12678999988753 3555555 443322
Q ss_pred cccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEEE
Q 046476 303 MFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERRA 343 (376)
Q Consensus 303 ~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~~ 343 (376)
....+++..+|..++.. +.++.+.+||+.+++...
T Consensus 351 ---~v~~~~~s~dg~~l~s~---~~dg~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 351 ---RVLYSALSPDGRILSTA---ASDENLKFWRVYDGDHVK 385 (401)
T ss_dssp ---CCCEEEECTTSSEEEEE---CTTSEEEEEECCC-----
T ss_pred ---CEEEEEECCCCCEEEEE---eCCCcEEEEECCCCcccc
Confidence 23456777888877765 268899999999876543
No 135
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=52.89 E-value=1.9e+02 Score=28.96 Aligned_cols=206 Identities=14% Similarity=0.120 Sum_probs=100.1
Q ss_pred cccccceEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCC
Q 046476 87 TQLINGFICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNS 166 (376)
Q Consensus 87 ~~s~nGLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~ 166 (376)
....+|-+.+.. ....++++||.++++.......... ..... .....+..|... . +++.+.
T Consensus 221 ~~d~~g~lwigt-~~~Gl~~~~~~~~~~~~~~~~~~~~----~~l~~-----~~i~~i~~d~~g-~---lWigt~----- 281 (795)
T 4a2l_A 221 LQQSPTRIWVAT-EGAGLFLINPKTKEIKNYLHSPSNP----KSISS-----NYIRSLAMDSQN-R---LWIGTF----- 281 (795)
T ss_dssp EEEETTEEEEEE-BSSCEEEEETTTTEEEEECCCTTCT----TSCSC-----SBEEEEEECTTS-C---EEEEES-----
T ss_pred EEcCCCCEEEEE-CCCCeEEEeCCCCeEEEeecCCCCc----cccCC-----CeEEEEEEcCCC-C---EEEEeC-----
Confidence 333456665553 3446888999988877654322110 00011 123334444321 1 333321
Q ss_pred CcccceecCCCCCeEEEEEcCCCCeeecCCCCCc---cee-cCCceEE--CceEEEEEeCCCCCCCEEEEEEcCCceeEE
Q 046476 167 SSYAWMIDNHGTPECEIFTLGTTSWRKIDAPPSR---IHF-RRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKEEKFDI 240 (376)
Q Consensus 167 ~~~~~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~---~~~-~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~ 240 (376)
. .+.+|+..++.+......+.. ... .-.+++. +|.+ |++.. .+.|..+|..+.+|..
T Consensus 282 -----------~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~l-Wigt~----~~Gl~~~~~~~~~~~~ 344 (795)
T 4a2l_A 282 -----------N-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGM-WLGTY----FGGLNYYHPIRNRFKN 344 (795)
T ss_dssp -----------S-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCE-EEEES----SSCEEEECGGGGSSEE
T ss_pred -----------C-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCE-EEEEC----CCCeEEeCCCcccceE
Confidence 2 567788888877765433210 010 1122333 3554 55551 4679999999998887
Q ss_pred EeCCCcc-----cCcceeEe-cCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeec---c-cccccCcEeE
Q 046476 241 VKLPDEV-----RKHHDLIQ-AEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRF---D-TIMFRPPIPV 310 (376)
Q Consensus 241 i~~P~~~-----~~~~~L~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~---~-~~~~~~~~~v 310 (376)
+...... ..-..+.+ -+|.|.+.... ..+..+ +.. ...+..... +. . .+.-.....+
T Consensus 345 ~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~-----~Gl~~~--~~~----~~~~~~~~~--~~~~~~~~l~~~~v~~i 411 (795)
T 4a2l_A 345 IRNIPYKNSLSDNVVSCIVEDKDKNLWIGTND-----GGLNLY--NPI----TQRFTSYTL--QEDESARGIGSNNIKAV 411 (795)
T ss_dssp ECCCTTSSSCSCSSEEEEEECTTSCEEEEESS-----SCEEEE--CTT----TCCEEEECC--C------CCSCSCEEEE
T ss_pred EcCCCCCCCCCCCeeEEEEECCCCCEEEEECC-----CCeEEE--cCC----CCcEEEEec--CCCCcccCCCCccEEEE
Confidence 7542211 11112222 24555554322 122222 221 223333211 11 0 1100122344
Q ss_pred EEccCCc-EEEEecccCCCcEEEEEeCCCCcEEEEE
Q 046476 311 SNSNNGE-ILLTEYKSSLVSRVFIYDLKTQERRAIK 345 (376)
Q Consensus 311 ~~~~~g~-il~~~~~~~~~~~v~~ydl~t~~~~~v~ 345 (376)
+...+|. |++.+ ....++.||+++++++.+.
T Consensus 412 ~~d~~g~~lWigt----~~~Gl~~~d~~~~~~~~~~ 443 (795)
T 4a2l_A 412 YVDEKKSLVYIGT----HAGGLSILHRNSGQVENFN 443 (795)
T ss_dssp EEETTTTEEEEEE----TTTEEEEEETTTCCEEEEC
T ss_pred EEcCCCCEEEEEe----CcCceeEEeCCCCcEEEee
Confidence 5556788 78877 5678999999998877653
No 136
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=52.54 E-value=1.7e+02 Score=28.27 Aligned_cols=219 Identities=12% Similarity=0.006 Sum_probs=107.9
Q ss_pred cce-EEEEEecCcEEEEEecC--C-cceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCC
Q 046476 91 NGF-ICFYNIVGFEILMRNVV--T-QEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNS 166 (376)
Q Consensus 91 nGL-l~~~~~~~~~~~V~NP~--T-~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~ 166 (376)
+.. |.+.......+++++.. + ++.+.|...+... +. .....+.+.|..+. ++.........
T Consensus 90 g~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~-------~~-----~~~~~~~~spDg~~--l~~~~~~~~~~- 154 (662)
T 3azo_A 90 GGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVG-------GG-----LRWADPVLLPERGE--VWCMAEEFTGE- 154 (662)
T ss_dssp SSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCST-------TC-----EEEEEEEEETTTTE--EEEEEEEECSS-
T ss_pred CCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCC-------CC-----ccccCcEECCCCCE--EEEEEecccCC-
Confidence 444 55553335678888887 4 7666665432110 00 24445666665432 22222211000
Q ss_pred CcccceecCCCCCeEEEEEcCC------CCeeecC-CCCCcceecCCceEECc-eEEEEEeCCCC---CCCEEEEEEcC-
Q 046476 167 SSYAWMIDNHGTPECEIFTLGT------TSWRKID-APPSRIHFRRQGLCANG-FIHWIITNPRK---TKPVLAVFDVK- 234 (376)
Q Consensus 167 ~~~~~~~~~~~~~~~~vys~~t------~~Wr~~~-~~~~~~~~~~~~v~~~G-~lywl~~~~~~---~~~~il~fDl~- 234 (376)
........+.+++..+ +.-+.+. .... ........-|| .|++....... ....|..+|++
T Consensus 155 ------~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~ 226 (662)
T 3azo_A 155 ------GPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHR--FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTE 226 (662)
T ss_dssp ------STTCEEEEEEEEETTSTTTTCGGGSEESSCSCSS--EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECT
T ss_pred ------CCCCceeEEEEEECCCCccccCCceeEEEecCCC--cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECC
Confidence 0001135677778777 6665554 2211 11222333466 46666642111 13479999998
Q ss_pred Cc---eeEEEeCCCcccCcceeEe-cCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccc--cccC-c
Q 046476 235 EE---KFDIVKLPDEVRKHHDLIQ-AEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTI--MFRP-P 307 (376)
Q Consensus 235 ~e---~~~~i~~P~~~~~~~~L~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~--~~~~-~ 307 (376)
+. +...+..... .....+.- -+|+|+++... .....||.++-. ...+..+.. ...... .+.. .
T Consensus 227 ~g~~~~~~~l~~~~~-~~~~~~~~spdg~l~~~~~~----~~~~~l~~~~~~----~~~~~~l~~-~~~~~~~p~w~~~~ 296 (662)
T 3azo_A 227 DGRFADTRTLLGGPE-EAIAQAEWAPDGSLIVATDR----TGWWNLHRVDPA----TGAATQLCR-REEEFAGPLWTPGM 296 (662)
T ss_dssp TSCEEEEEEEEEETT-BCEEEEEECTTSCEEEEECT----TSSCEEEEECTT----TCCEEESSC-CSSBSSCCCCSTTC
T ss_pred CCcccccEEeCCCCC-ceEcceEECCCCeEEEEECC----CCCeEEEEEECC----CCceeeccc-ccccccCccccccC
Confidence 55 4443321100 11222332 37886655543 345678888743 234544322 111100 0111 2
Q ss_pred EeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEEEE
Q 046476 308 IPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 308 ~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~~v 344 (376)
..+++..++.+++.... ....++.+|+++++.+.+
T Consensus 297 ~~~~~~~~~~~~~~~~~--~~~~l~~~d~~~~~~~~l 331 (662)
T 3azo_A 297 RWFAPLANGLIAVVHGK--GAAVLGILDPESGELVDA 331 (662)
T ss_dssp CSEEECTTSCEEEEEBS--SSCEEEEEETTTTEEEEC
T ss_pred ceEeEeCCCEEEEEEEc--CccEEEEEECCCCcEEEe
Confidence 34566667888877643 566788889988887665
No 137
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=52.44 E-value=1.4e+02 Score=27.28 Aligned_cols=201 Identities=11% Similarity=0.138 Sum_probs=103.4
Q ss_pred cccceEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCc
Q 046476 89 LINGFICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSS 168 (376)
Q Consensus 89 s~nGLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~ 168 (376)
+.+|-|.+.......+.+++|.+++...+..... . . . +.+++..+ .++.....
T Consensus 139 d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~-~---------------~-~-ia~~~~g~--~l~~~d~~------- 191 (409)
T 3hrp_A 139 VGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK-G---------------G-K-PAVTKDKQ--RVYSIGWE------- 191 (409)
T ss_dssp CSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC-B---------------C-B-CEECTTSS--EEEEEBSS-------
T ss_pred eCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC-C---------------C-c-eeEecCCC--cEEEEecC-------
Confidence 3566666665455789999999988876643311 1 1 1 44555433 12222110
Q ss_pred ccceecCCCCCeEEEEEcCCCC-eeecCCCCCcceecCCceEE---CceEEEEEeCCCCCCCEEEEEEcCCceeEEEe--
Q 046476 169 YAWMIDNHGTPECEIFTLGTTS-WRKIDAPPSRIHFRRQGLCA---NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVK-- 242 (376)
Q Consensus 169 ~~~~~~~~~~~~~~vys~~t~~-Wr~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~-- 242 (376)
....+.+++..++. .+.+....+.......++.+ +|.+|+ +. . .+.|..||+++.....+.
T Consensus 192 --------~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d---~-~~~I~~~d~~~~~~~~~~~~ 258 (409)
T 3hrp_A 192 --------GTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF-VD---S-NKNFGRFNVKTQEVTLIKQL 258 (409)
T ss_dssp --------TTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE-EC---T-TCEEEEEETTTCCEEEEEEC
T ss_pred --------CCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEE-EE---C-CCcEEEEECCCCCEEEEecc
Confidence 01255666655432 22331110000011223333 689999 44 1 568999999987766652
Q ss_pred -CCCcccCc-c-eeEec--CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecc-c----------ccccC
Q 046476 243 -LPDEVRKH-H-DLIQA--EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFD-T----------IMFRP 306 (376)
Q Consensus 243 -~P~~~~~~-~-~L~~~--~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~-~----------~~~~~ 306 (376)
........ . .+... +|.|+++... .. .|++++..+ .- ..+.+.. . -.+..
T Consensus 259 ~~~g~~~~~P~~~ia~~p~~g~lyv~d~~----~~--~I~~~~~~g-----~~---~~~~g~~~~~g~~dg~~~~~~~~~ 324 (409)
T 3hrp_A 259 ELSGSLGTNPGPYLIYYFVDSNFYMSDQN----LS--SVYKITPDG-----EC---EWFCGSATQKTVQDGLREEALFAQ 324 (409)
T ss_dssp CCCSCCCCSSCCEEEEETTTTEEEEEETT----TT--EEEEECTTC-----CE---EEEEECTTCCSCBCEEGGGCBCSS
T ss_pred cccCCCCCCccccEEEeCCCCEEEEEeCC----CC--EEEEEecCC-----CE---EEEEeCCCCCCcCCCcccccEeCC
Confidence 11111112 1 45443 6888887654 34 455555332 11 1112211 0 00121
Q ss_pred cEeEEEccCCcEEEEecccC-CCcEEEEEeCCCCcEEEEEE
Q 046476 307 PIPVSNSNNGEILLTEYKSS-LVSRVFIYDLKTQERRAIKI 346 (376)
Q Consensus 307 ~~~v~~~~~g~il~~~~~~~-~~~~v~~ydl~t~~~~~v~~ 346 (376)
..-+++..+|.+++.. . ..+.|..+|+.++++..+.-
T Consensus 325 P~gia~d~dG~lyvad---~~~~~~I~~~~~~~G~v~~~~g 362 (409)
T 3hrp_A 325 PNGMTVDEDGNFYIVD---GFKGYCLRKLDILDGYVSTVAG 362 (409)
T ss_dssp EEEEEECTTCCEEEEE---TTTTCEEEEEETTTTEEEEEEE
T ss_pred CeEEEEeCCCCEEEEe---CCCCCEEEEEECCCCEEEEEeC
Confidence 1335777788988876 2 46789999988888776644
No 138
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=51.50 E-value=1.1e+02 Score=26.02 Aligned_cols=138 Identities=9% Similarity=0.071 Sum_probs=69.2
Q ss_pred CeEEEEEcCCC--CeeecCCCCCcceecCCceEECceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcc----cCcce
Q 046476 179 PECEIFTLGTT--SWRKIDAPPSRIHFRRQGLCANGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEV----RKHHD 252 (376)
Q Consensus 179 ~~~~vys~~t~--~Wr~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~----~~~~~ 252 (376)
..+..|+. ++ .|+....... ......+..||.++.... .. ...+++||.+.+....+.+.... .....
T Consensus 56 ~~V~~~d~-~G~~~W~~~~~~~~--~~~~~~~~~dG~~lv~~~--~~-~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~ 129 (276)
T 3no2_A 56 KGAKMITR-DGRELWNIAAPAGC--EMQTARILPDGNALVAWC--GH-PSTILEVNMKGEVLSKTEFETGIERPHAQFRQ 129 (276)
T ss_dssp SEEEEECT-TSCEEEEEECCTTC--EEEEEEECTTSCEEEEEE--ST-TEEEEEECTTSCEEEEEEECCSCSSGGGSCSC
T ss_pred CCEEEECC-CCCEEEEEcCCCCc--cccccEECCCCCEEEEec--CC-CCEEEEEeCCCCEEEEEeccCCCCcccccccC
Confidence 34666776 43 4665432110 111223344677666554 11 35688888866544444433221 11111
Q ss_pred e-EecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEE
Q 046476 253 L-IQAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRV 331 (376)
Q Consensus 253 L-~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v 331 (376)
+ ...+|.+.++... ...+..|-.+ | +..|+.. .+..+ ..+....+|.+++... ...+|
T Consensus 130 v~~~~~G~~lv~~~~----~~~v~~~d~~--G---~~~w~~~---~~~~~------~~~~~~~~g~~~v~~~---~~~~v 188 (276)
T 3no2_A 130 INKNKKGNYLVPLFA----TSEVREIAPN--G---QLLNSVK---LSGTP------FSSAFLDNGDCLVACG---DAHCF 188 (276)
T ss_dssp CEECTTSCEEEEETT----TTEEEEECTT--S---CEEEEEE---CSSCC------CEEEECTTSCEEEECB---TTSEE
T ss_pred ceECCCCCEEEEecC----CCEEEEECCC--C---CEEEEEE---CCCCc------cceeEcCCCCEEEEeC---CCCeE
Confidence 2 2347776665543 4555555332 3 4556543 22111 1233346787777652 45689
Q ss_pred EEEeCCCCcEEE
Q 046476 332 FIYDLKTQERRA 343 (376)
Q Consensus 332 ~~ydl~t~~~~~ 343 (376)
+.+|++|+++.+
T Consensus 189 ~~~d~~tG~~~w 200 (276)
T 3no2_A 189 VQLNLESNRIVR 200 (276)
T ss_dssp EEECTTTCCEEE
T ss_pred EEEeCcCCcEEE
Confidence 999999666644
No 139
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=51.40 E-value=1.2e+02 Score=26.15 Aligned_cols=71 Identities=20% Similarity=0.267 Sum_probs=43.7
Q ss_pred CeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCC
Q 046476 258 EKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLK 337 (376)
Q Consensus 258 g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~ 337 (376)
|.+.++... ...+.||-++..+ ...... +..+.. ....+++..++..++... .++.+.+||++
T Consensus 54 g~~l~~~~~----dg~i~iw~~~~~~------~~~~~~-~~~h~~---~v~~~~~~~~~~~l~s~~---~dg~v~iwd~~ 116 (368)
T 3mmy_A 54 GNFLIAGSW----ANDVRCWEVQDSG------QTIPKA-QQMHTG---PVLDVCWSDDGSKVFTAS---CDKTAKMWDLS 116 (368)
T ss_dssp SEEEEEEET----TSEEEEEEECTTS------CEEEEE-EEECSS---CEEEEEECTTSSEEEEEE---TTSEEEEEETT
T ss_pred ceEEEEECC----CCcEEEEEcCCCC------ceeEEE-eccccC---CEEEEEECcCCCEEEEEc---CCCcEEEEEcC
Confidence 455555544 6789999987531 222222 222221 224567777787666542 68899999999
Q ss_pred CCcEEEEE
Q 046476 338 TQERRAIK 345 (376)
Q Consensus 338 t~~~~~v~ 345 (376)
+++...+.
T Consensus 117 ~~~~~~~~ 124 (368)
T 3mmy_A 117 SNQAIQIA 124 (368)
T ss_dssp TTEEEEEE
T ss_pred CCCceeec
Confidence 98876653
No 140
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=51.38 E-value=1.2e+02 Score=26.37 Aligned_cols=46 Identities=15% Similarity=0.153 Sum_probs=31.7
Q ss_pred ceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcccCcceeE-ecCCeEEEEE
Q 046476 212 GFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEVRKHHDLI-QAEEKLGVLD 264 (376)
Q Consensus 212 G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~-~~~g~L~~~~ 264 (376)
|.+||.... ...|..+|+.+.+...+..|... ..+. .-+|++.+..
T Consensus 61 ~~l~~~d~~----~~~i~~~d~~~~~~~~~~~~~~v---~~i~~~~dg~l~v~~ 107 (326)
T 2ghs_A 61 GTAWWFNIL----ERELHELHLASGRKTVHALPFMG---SALAKISDSKQLIAS 107 (326)
T ss_dssp TEEEEEEGG----GTEEEEEETTTTEEEEEECSSCE---EEEEEEETTEEEEEE
T ss_pred CEEEEEECC----CCEEEEEECCCCcEEEEECCCcc---eEEEEeCCCeEEEEE
Confidence 789998752 56899999999888877766432 2232 3377776654
No 141
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=50.57 E-value=1.2e+02 Score=26.19 Aligned_cols=98 Identities=13% Similarity=0.110 Sum_probs=56.5
Q ss_pred CCEEEEEEcCCceeEE-EeCCCcccCcceeEe-cCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccc
Q 046476 225 KPVLAVFDVKEEKFDI-VKLPDEVRKHHDLIQ-AEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTI 302 (376)
Q Consensus 225 ~~~il~fDl~~e~~~~-i~~P~~~~~~~~L~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~ 302 (376)
.+.|..||+++.+-.. +..... ....+.- -+|++.+.... ...+.||-++.. ..+.. +..+..
T Consensus 143 dg~v~i~~~~~~~~~~~~~~~~~--~v~~~~~spdg~~lasg~~----dg~i~iwd~~~~--------~~~~~-~~~h~~ 207 (321)
T 3ow8_A 143 VGKVNIFGVESGKKEYSLDTRGK--FILSIAYSPDGKYLASGAI----DGIINIFDIATG--------KLLHT-LEGHAM 207 (321)
T ss_dssp TSEEEEEETTTCSEEEEEECSSS--CEEEEEECTTSSEEEEEET----TSCEEEEETTTT--------EEEEE-ECCCSS
T ss_pred CCcEEEEEcCCCceeEEecCCCc--eEEEEEECCCCCEEEEEcC----CCeEEEEECCCC--------cEEEE-EcccCC
Confidence 6778889988765432 222211 1112222 25665555544 678999976532 23334 443322
Q ss_pred cccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEEE
Q 046476 303 MFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERRA 343 (376)
Q Consensus 303 ~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~~ 343 (376)
....+++.+++.+++.. +.++.+.+||+++.+...
T Consensus 208 ---~v~~l~~spd~~~l~s~---s~dg~i~iwd~~~~~~~~ 242 (321)
T 3ow8_A 208 ---PIRSLTFSPDSQLLVTA---SDDGYIKIYDVQHANLAG 242 (321)
T ss_dssp ---CCCEEEECTTSCEEEEE---CTTSCEEEEETTTCCEEE
T ss_pred ---ceeEEEEcCCCCEEEEE---cCCCeEEEEECCCcceeE
Confidence 23456777888877665 267889999998876543
No 142
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=50.00 E-value=1.4e+02 Score=26.44 Aligned_cols=93 Identities=9% Similarity=-0.029 Sum_probs=48.9
Q ss_pred CCEEEEEEcCCceeE-EEeCCCcccCcceeEec-CC-eEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeeccc
Q 046476 225 KPVLAVFDVKEEKFD-IVKLPDEVRKHHDLIQA-EE-KLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDT 301 (376)
Q Consensus 225 ~~~il~fDl~~e~~~-~i~~P~~~~~~~~L~~~-~g-~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~ 301 (376)
++.|..||+.+.+.. .+..... ....+.-. +| .+.+.... ...+.||-++. . ..... ++. .
T Consensus 248 d~~i~~wd~~~~~~~~~~~~~~~--~v~~l~~sp~~~~~lasgs~----D~~i~iwd~~~------~--~~~~~-~~H-~ 311 (357)
T 4g56_B 248 TGNVSLVNIKNPDSAQTSAVHSQ--NITGLAYSYHSSPFLASISE----DCTVAVLDADF------S--EVFRD-LSH-R 311 (357)
T ss_dssp SSCEEEEESSCGGGCEEECCCSS--CEEEEEECSSSSCCEEEEET----TSCEEEECTTS------C--EEEEE-CCC-S
T ss_pred ccceeEEECCCCcEeEEEeccce--eEEEEEEcCCCCCEEEEEeC----CCEEEEEECCC------C--cEeEE-CCC-C
Confidence 567889999876532 2333221 11223222 44 44333333 57899995432 1 12222 332 1
Q ss_pred ccccCcEeEEEcc-CCcEEEEecccCCCcEEEEEeCCCC
Q 046476 302 IMFRPPIPVSNSN-NGEILLTEYKSSLVSRVFIYDLKTQ 339 (376)
Q Consensus 302 ~~~~~~~~v~~~~-~g~il~~~~~~~~~~~v~~ydl~t~ 339 (376)
....-+++.+ ++.+|... +.++.|.+||+.++
T Consensus 312 ---~~V~~vafsP~d~~~l~s~---s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 312 ---DFVTGVAWSPLDHSKFTTV---GWDHKVLHHHLPSE 344 (357)
T ss_dssp ---SCEEEEEECSSSTTEEEEE---ETTSCEEEEECC--
T ss_pred ---CCEEEEEEeCCCCCEEEEE---cCCCeEEEEECCCC
Confidence 1224567665 67777655 26889999999764
No 143
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=49.21 E-value=1.4e+02 Score=26.44 Aligned_cols=108 Identities=10% Similarity=-0.032 Sum_probs=53.8
Q ss_pred CCEEEEEEcCCceeEEEeCCCcc-cCcceeE-ecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccc
Q 046476 225 KPVLAVFDVKEEKFDIVKLPDEV-RKHHDLI-QAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTI 302 (376)
Q Consensus 225 ~~~il~fDl~~e~~~~i~~P~~~-~~~~~L~-~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~ 302 (376)
.+.+..++..+.+.......... .....+. .-+|.+.+...........+.+|-+... ...-.+... +..+.-
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~----~~~~~~~~~-~~~~~~ 270 (365)
T 4h5i_A 196 GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSG----NTSVLRSKQ-VTNRFK 270 (365)
T ss_dssp SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETT----EEEEEEEEE-EESSCS
T ss_pred ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccc----eecceeeee-ecCCCC
Confidence 45577777776655433322211 1111122 2266655544431112224555555432 111112222 232221
Q ss_pred cccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEEE
Q 046476 303 MFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERRA 343 (376)
Q Consensus 303 ~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~~ 343 (376)
....+++.++|.++... +.++.|.+||+++.+...
T Consensus 271 ---~V~~~~~Spdg~~lasg---s~D~~V~iwd~~~~~~~~ 305 (365)
T 4h5i_A 271 ---GITSMDVDMKGELAVLA---SNDNSIALVKLKDLSMSK 305 (365)
T ss_dssp ---CEEEEEECTTSCEEEEE---ETTSCEEEEETTTTEEEE
T ss_pred ---CeEeEEECCCCCceEEE---cCCCEEEEEECCCCcEEE
Confidence 23456788899877654 267889999999877543
No 144
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=48.85 E-value=1.3e+02 Score=25.89 Aligned_cols=68 Identities=16% Similarity=0.106 Sum_probs=39.9
Q ss_pred CeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCC
Q 046476 258 EKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLK 337 (376)
Q Consensus 258 g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~ 337 (376)
|.+.++... ...+.||-++.. +........ +..+.. -.....+++..++..++... .++.|.+||+.
T Consensus 299 ~~~l~~~~~----dg~i~vwd~~~~----~~~~~~~~~-~~~~~~-~~~v~~~~~s~~~~~l~s~~---~dg~i~iwd~~ 365 (366)
T 3k26_A 299 QKMLALGNQ----VGKLYVWDLEVE----DPHKAKCTT-LTHHKC-GAAIRQTSFSRDSSILIAVC---DDASIWRWDRL 365 (366)
T ss_dssp SSEEEEECT----TSCEEEEECCSS----SGGGCEEEE-ECCTTC-CSCEEEEEECTTSSEEEEEE---TTSEEEEEEC-
T ss_pred CcEEEEEec----CCcEEEEECCCC----CCccccceE-Eccccc-CCceEEEEeCCCCCeEEEEe---CCCEEEEEEec
Confidence 666555543 678999988753 222223334 443311 01234567777888776652 68899999986
Q ss_pred C
Q 046476 338 T 338 (376)
Q Consensus 338 t 338 (376)
+
T Consensus 366 ~ 366 (366)
T 3k26_A 366 R 366 (366)
T ss_dssp -
T ss_pred C
Confidence 4
No 145
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=48.23 E-value=1.9e+02 Score=27.59 Aligned_cols=121 Identities=11% Similarity=0.115 Sum_probs=70.6
Q ss_pred CceEEEEEeCCCCCCCEEEEEEcCCceeEE-EeCCCcc--cCcceeEecC-CeEEEEEecCCCCCCeEEEEEEccCCCCC
Q 046476 211 NGFIHWIITNPRKTKPVLAVFDVKEEKFDI-VKLPDEV--RKHHDLIQAE-EKLGVLDCDDFRSKNKIRVWILKDYGRGG 286 (376)
Q Consensus 211 ~G~lywl~~~~~~~~~~il~fDl~~e~~~~-i~~P~~~--~~~~~L~~~~-g~L~~~~~~~~~~~~~~~IW~l~~~~~g~ 286 (376)
+|...+.+.+ . .+.|..+|+.+.+... ++..... .....+..-+ |.+.+.... ...++.||-++..+. .
T Consensus 334 dg~~l~va~~--~-~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~---~d~~V~v~d~~~~~~-~ 406 (543)
T 1nir_A 334 SHRYFMTAAN--N-SNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHL---GDGSISLIGTDPKNH-P 406 (543)
T ss_dssp TSCEEEEEEG--G-GTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBS---SSSEEEEEECCTTTC-T
T ss_pred CCCEEEEEec--C-CCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccC---CCceEEEEEeCCCCC-c
Confidence 5664444431 1 5689999999987644 3432111 1112223334 666554432 267899998875320 2
Q ss_pred CCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCC----CcEEEEEeCCCCcEE
Q 046476 287 GEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSL----VSRVFIYDLKTQERR 342 (376)
Q Consensus 287 ~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~----~~~v~~ydl~t~~~~ 342 (376)
+..|..+.+ ++...- ....+.++.++..+++...... +..|.+||.++.+..
T Consensus 407 ~~~~~~v~~-l~~~g~---~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 407 QYAWKKVAE-LQGQGG---GSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp TTBTSEEEE-EECSCS---CCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred hhcCeEEEE-EEcCCC---CceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 345988888 564332 1144677889988887621111 458999999987654
No 146
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=47.99 E-value=1.4e+02 Score=25.92 Aligned_cols=137 Identities=14% Similarity=0.005 Sum_probs=76.7
Q ss_pred EEEEEcCCCCeeecCCCCCcceecCCce-EECceEEEEEeCCCCCCCEEEEEEcCCce-eEEEeCCCcccCcceeEecCC
Q 046476 181 CEIFTLGTTSWRKIDAPPSRIHFRRQGL-CANGFIHWIITNPRKTKPVLAVFDVKEEK-FDIVKLPDEVRKHHDLIQAEE 258 (376)
Q Consensus 181 ~~vys~~t~~Wr~~~~~~~~~~~~~~~v-~~~G~lywl~~~~~~~~~~il~fDl~~e~-~~~i~~P~~~~~~~~L~~~~g 258 (376)
+.+++..|++=.... .++.. ...++ ..++.+|-++.. .+.+.+||.++.+ -..|+.+.+ ...|..-++
T Consensus 77 v~~iD~~Tgkv~~~~-l~~~~--FgeGit~~g~~Ly~ltw~----~~~v~V~D~~Tl~~~~ti~~~~e---GwGLt~Dg~ 146 (268)
T 3nok_A 77 LRQLSLESAQPVWME-RLGNI--FAEGLASDGERLYQLTWT----EGLLFTWSGMPPQRERTTRYSGE---GWGLCYWNG 146 (268)
T ss_dssp EEECCSSCSSCSEEE-ECTTC--CEEEEEECSSCEEEEESS----SCEEEEEETTTTEEEEEEECSSC---CCCEEEETT
T ss_pred EEEEECCCCcEEeEE-CCCCc--ceeEEEEeCCEEEEEEcc----CCEEEEEECCcCcEEEEEeCCCc---eeEEecCCC
Confidence 778888886432211 22211 11223 345788888762 6889999999754 456777654 345666677
Q ss_pred eEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEE-eecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCC
Q 046476 259 KLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYV-FRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLK 337 (376)
Q Consensus 259 ~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~i-i~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~ 337 (376)
+|++.... . .|++++-. .. ..+.+| +......+....-+.. .+|+|+... ...+.|...|++
T Consensus 147 ~L~vSdGs-----~--~l~~iDp~----T~--~v~~~I~V~~~g~~v~~lNeLe~-~dG~lyanv---w~s~~I~vIDp~ 209 (268)
T 3nok_A 147 KLVRSDGG-----T--MLTFHEPD----GF--ALVGAVQVKLRGQPVELINELEC-ANGVIYANI---WHSSDVLEIDPA 209 (268)
T ss_dssp EEEEECSS-----S--EEEEECTT----TC--CEEEEEECEETTEECCCEEEEEE-ETTEEEEEE---TTCSEEEEECTT
T ss_pred EEEEECCC-----C--EEEEEcCC----CC--eEEEEEEeCCCCcccccccccEE-eCCEEEEEE---CCCCeEEEEeCC
Confidence 78777532 2 57777743 22 233331 2211110111111322 377877655 257799999999
Q ss_pred CCcEEEE
Q 046476 338 TQERRAI 344 (376)
Q Consensus 338 t~~~~~v 344 (376)
|+++...
T Consensus 210 TG~V~~~ 216 (268)
T 3nok_A 210 TGTVVGV 216 (268)
T ss_dssp TCBEEEE
T ss_pred CCcEEEE
Confidence 9987543
No 147
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=47.78 E-value=1.3e+02 Score=25.56 Aligned_cols=99 Identities=17% Similarity=0.144 Sum_probs=55.5
Q ss_pred CCEEEEEEcCCceeE-EEeCCCcccCcceeEe-cCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccc
Q 046476 225 KPVLAVFDVKEEKFD-IVKLPDEVRKHHDLIQ-AEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTI 302 (376)
Q Consensus 225 ~~~il~fDl~~e~~~-~i~~P~~~~~~~~L~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~ 302 (376)
++.|..||+.+.+.. .+..... ....+.- -+|.+.+.... ...+.||-+... .....++....
T Consensus 128 d~~i~iwd~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~----d~~i~~wd~~~~--------~~~~~~~~~~~- 192 (312)
T 4ery_A 128 DESVRIWDVKTGKCLKTLPAHSD--PVSAVHFNRDGSLIVSSSY----DGLCRIWDTASG--------QCLKTLIDDDN- 192 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCCSS--CEEEEEECTTSSEEEEEET----TSCEEEEETTTC--------CEEEEECCSSC-
T ss_pred CCcEEEEECCCCEEEEEecCCCC--cEEEEEEcCCCCEEEEEeC----CCcEEEEECCCC--------ceeeEEeccCC-
Confidence 677999999876543 2322211 1122222 25666555544 678999976542 12222111111
Q ss_pred cccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEEE
Q 046476 303 MFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERRA 343 (376)
Q Consensus 303 ~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~~ 343 (376)
.....+++..++..++... .++.+.+||+++.+...
T Consensus 193 --~~~~~~~~~~~~~~l~~~~---~d~~i~iwd~~~~~~~~ 228 (312)
T 4ery_A 193 --PPVSFVKFSPNGKYILAAT---LDNTLKLWDYSKGKCLK 228 (312)
T ss_dssp --CCEEEEEECTTSSEEEEEE---TTTEEEEEETTTTEEEE
T ss_pred --CceEEEEECCCCCEEEEEc---CCCeEEEEECCCCcEEE
Confidence 1223456777887666542 68899999999886544
No 148
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=46.94 E-value=1.4e+02 Score=25.55 Aligned_cols=47 Identities=6% Similarity=0.012 Sum_probs=31.4
Q ss_pred CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcccCcceeEe-cCCeEEEEE
Q 046476 211 NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQ-AEEKLGVLD 264 (376)
Q Consensus 211 ~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~-~~g~L~~~~ 264 (376)
+|.+||.... ...|..||+.+.+...+..|... ..+.. -+|+|.+..
T Consensus 24 ~~~l~~~d~~----~~~i~~~d~~~~~~~~~~~~~~~---~~i~~~~dG~l~v~~ 71 (297)
T 3g4e_A 24 SNSLLFVDIP----AKKVCRWDSFTKQVQRVTMDAPV---SSVALRQSGGYVATI 71 (297)
T ss_dssp TTEEEEEETT----TTEEEEEETTTCCEEEEECSSCE---EEEEEBTTSSEEEEE
T ss_pred CCEEEEEECC----CCEEEEEECCCCcEEEEeCCCce---EEEEECCCCCEEEEE
Confidence 4789998651 67899999999888777766532 22333 367765543
No 149
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=46.31 E-value=1.3e+02 Score=25.33 Aligned_cols=114 Identities=9% Similarity=0.008 Sum_probs=62.3
Q ss_pred Cce-EEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcccCcceeEe-cCCeEEEEEecCCCCCCeEEEEEEccCCCCCCC
Q 046476 211 NGF-IHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQ-AEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGE 288 (376)
Q Consensus 211 ~G~-lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~ 288 (376)
+|. +||.... .+.|..||+.++ ++.+..|.. ....+.. -+|+|.++... ...+.+|-.++ .
T Consensus 38 ~g~~l~~~~~~----~~~i~~~~~~~~-~~~~~~~~~--~~~~l~~~~dg~l~v~~~~----~~~i~~~d~~~------g 100 (296)
T 3e5z_A 38 ARSAVIFSDVR----QNRTWAWSDDGQ-LSPEMHPSH--HQNGHCLNKQGHLIACSHG----LRRLERQREPG------G 100 (296)
T ss_dssp GGTEEEEEEGG----GTEEEEEETTSC-EEEEESSCS--SEEEEEECTTCCEEEEETT----TTEEEEECSTT------C
T ss_pred CCCEEEEEeCC----CCEEEEEECCCC-eEEEECCCC--CcceeeECCCCcEEEEecC----CCeEEEEcCCC------C
Confidence 464 8998762 578999999998 777766543 1223433 37888666533 35555553322 2
Q ss_pred ceeEEEEEeecccccccCcEeEEEccCCcEEEEec--cc------------CCCcEEEEEeCCCCcEEEE
Q 046476 289 VWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEY--KS------------SLVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 289 ~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~--~~------------~~~~~v~~ydl~t~~~~~v 344 (376)
............. ......+++..+|.+++... .. .....|+.+|++ ++++.+
T Consensus 101 ~~~~~~~~~~~~~--~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (296)
T 3e5z_A 101 EWESIADSFEGKK--LNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAP 167 (296)
T ss_dssp CEEEEECEETTEE--CCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEE
T ss_pred cEEEEeeccCCCC--CCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEe
Confidence 2332221011111 11123467778888888531 00 013578889887 555544
No 150
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=46.29 E-value=2.2e+02 Score=27.79 Aligned_cols=96 Identities=11% Similarity=0.082 Sum_probs=58.0
Q ss_pred CCEEEEEEcCCceeEEE-eCCCcccCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccc
Q 046476 225 KPVLAVFDVKEEKFDIV-KLPDEVRKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTI 302 (376)
Q Consensus 225 ~~~il~fDl~~e~~~~i-~~P~~~~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~ 302 (376)
++.|..+|+.+.+.... .... ..-..+... +|++.+.... ...+.||-+... ..+.. +....
T Consensus 540 d~~v~vwd~~~~~~~~~~~~h~--~~v~~v~~spdg~~l~sg~~----Dg~i~iwd~~~~--------~~~~~-~~~~~- 603 (694)
T 3dm0_A 540 DKTVKVWNLSNCKLRSTLAGHT--GYVSTVAVSPDGSLCASGGK----DGVVLLWDLAEG--------KKLYS-LEANS- 603 (694)
T ss_dssp TSCEEEEETTTCCEEEEECCCS--SCEEEEEECTTSSEEEEEET----TSBCEEEETTTT--------EEEEC-CBCSS-
T ss_pred CCeEEEEECCCCcEEEEEcCCC--CCEEEEEEeCCCCEEEEEeC----CCeEEEEECCCC--------ceEEE-ecCCC-
Confidence 67799999988665432 2211 112223332 6676565554 678999977642 12233 32211
Q ss_pred cccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEEE
Q 046476 303 MFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERRA 343 (376)
Q Consensus 303 ~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~~ 343 (376)
....+++..++.++... .+..+.+||+++++...
T Consensus 604 ---~v~~~~~sp~~~~l~~~----~~~~i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 604 ---VIHALCFSPNRYWLCAA----TEHGIKIWDLESKSIVE 637 (694)
T ss_dssp ---CEEEEEECSSSSEEEEE----ETTEEEEEETTTTEEEE
T ss_pred ---cEEEEEEcCCCcEEEEE----cCCCEEEEECCCCCChh
Confidence 12456777788888776 57789999999887643
No 151
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=46.27 E-value=1.8e+02 Score=26.78 Aligned_cols=116 Identities=14% Similarity=0.123 Sum_probs=63.7
Q ss_pred CCceEEC----ceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcccCcceeEe-cCCe-EEEEEecCCCCCCeEEEEE
Q 046476 205 RQGLCAN----GFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQ-AEEK-LGVLDCDDFRSKNKIRVWI 278 (376)
Q Consensus 205 ~~~v~~~----G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~-~~g~-L~~~~~~~~~~~~~~~IW~ 278 (376)
..++.++ |.||+... ...|..||+++.+...+..+.. ....|.. .+|. |+++.... .......+|.
T Consensus 139 P~~lavdp~~~g~Lyv~d~-----~~~I~~id~~~~~v~~~~~~~~--~P~~ia~d~~G~~lyvad~~~-~~~~~~v~~~ 210 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGE-----QHPTRLIDFEKEYVSTVYSGLS--KVRTICWTHEADSMIITNDQN-NNDRPNNYIL 210 (430)
T ss_dssp CCEEEEETTEEEEEEEEEB-----TEEEEEEETTTTEEEEEECCCS--CEEEEEECTTSSEEEEEECCS-CTTSEEEEEE
T ss_pred CCEEEECCCCCCeEEEEeC-----CCcEEEEECCCCEEEEEecCCC--CcceEEEeCCCCEEEEEeCCC-CcccceEEEE
Confidence 3455544 88888776 3789999999988776643221 1223333 3565 77776531 1123344555
Q ss_pred EccCCCCCCCceeEEEEEeecccccccCcEeEEEcc-CCcEEEEecccCCCcEEEEEeCCCCcEE
Q 046476 279 LKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSN-NGEILLTEYKSSLVSRVFIYDLKTQERR 342 (376)
Q Consensus 279 l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~-~g~il~~~~~~~~~~~v~~ydl~t~~~~ 342 (376)
..+. .|..... +... ....-+++.. +|.|++... ...+|+.||+++++..
T Consensus 211 ~~~g------~~~~~~~-l~~~----~~p~giavdp~~g~lyv~d~---~~~~V~~~~~~~~~~~ 261 (430)
T 3tc9_A 211 TRES------GFKVITE-LTKG----QNCNGAETHPINGELYFNSW---NAGQVFRYDFTTQETT 261 (430)
T ss_dssp EGGG------TSCSEEE-EEEC----SSCCCEEECTTTCCEEEEET---TTTEEEEEETTTTEEE
T ss_pred eCCC------ceeeeee-eccC----CCceEEEEeCCCCEEEEEEC---CCCEEEEEECCCCcEE
Confidence 4432 2332223 2311 1113355666 677777652 4567888888777653
No 152
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=45.57 E-value=1.1e+02 Score=26.59 Aligned_cols=71 Identities=11% Similarity=0.076 Sum_probs=40.8
Q ss_pred CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeC
Q 046476 257 EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDL 336 (376)
Q Consensus 257 ~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl 336 (376)
+|.+.+.... ...+.||-+++. ...+..... +..+.- ....+.+.+++.+++.. +.++.+.+||.
T Consensus 118 ~g~~las~s~----D~~v~iwd~~~~----~~~~~~~~~-~~~h~~---~v~~v~~~p~~~~l~s~---s~D~~i~iW~~ 182 (330)
T 2hes_X 118 DGYYLATCSR----DKSVWIWETDES----GEEYECISV-LQEHSQ---DVKHVIWHPSEALLASS---SYDDTVRIWKD 182 (330)
T ss_dssp TSCEEEEEET----TSCEEEEECCTT----CCCCEEEEE-ECCCSS---CEEEEEECSSSSEEEEE---ETTSCEEEEEE
T ss_pred CCCEEEEEeC----CCEEEEEeccCC----CCCeEEEEE-eccCCC---ceEEEEECCCCCEEEEE---cCCCeEEEEEC
Confidence 4444344433 678999988643 234555555 443322 22445666677766654 25677888887
Q ss_pred CCCcEE
Q 046476 337 KTQERR 342 (376)
Q Consensus 337 ~t~~~~ 342 (376)
.++.++
T Consensus 183 ~~~~~~ 188 (330)
T 2hes_X 183 YDDDWE 188 (330)
T ss_dssp ETTEEE
T ss_pred CCCCee
Confidence 766443
No 153
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=45.57 E-value=1.4e+02 Score=25.41 Aligned_cols=95 Identities=9% Similarity=0.041 Sum_probs=54.5
Q ss_pred CCEEEEEEcCCcee-EEEeCCCcccCccee-EecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccc
Q 046476 225 KPVLAVFDVKEEKF-DIVKLPDEVRKHHDL-IQAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTI 302 (376)
Q Consensus 225 ~~~il~fDl~~e~~-~~i~~P~~~~~~~~L-~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~ 302 (376)
++.|..+|+++.+. ..+...... ...+ ..-+|.+.+.... ...+.||-++.. ..... +..+.-
T Consensus 34 dg~v~lWd~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~s~s~----d~~i~vwd~~~~--------~~~~~-~~~h~~ 98 (304)
T 2ynn_A 34 SGRVELWNYETQVEVRSIQVTETP--VRAGKFIARKNWIIVGSD----DFRIRVFNYNTG--------EKVVD-FEAHPD 98 (304)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSC--EEEEEEEGGGTEEEEEET----TSEEEEEETTTC--------CEEEE-EECCSS
T ss_pred CCcEEEEECCCCceeEEeeccCCc--EEEEEEeCCCCEEEEECC----CCEEEEEECCCC--------cEEEE-EeCCCC
Confidence 67899999987654 333433221 1111 2225555555544 788999976642 12233 333221
Q ss_pred cccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCc
Q 046476 303 MFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQE 340 (376)
Q Consensus 303 ~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~ 340 (376)
....+++.+++..++.. +.++.|.+||++++.
T Consensus 99 ---~v~~~~~~~~~~~l~sg---s~D~~v~lWd~~~~~ 130 (304)
T 2ynn_A 99 ---YIRSIAVHPTKPYVLSG---SDDLTVKLWNWENNW 130 (304)
T ss_dssp ---CEEEEEECSSSSEEEEE---ETTSCEEEEEGGGTT
T ss_pred ---cEEEEEEcCCCCEEEEE---CCCCeEEEEECCCCc
Confidence 22456777777766654 267888899988763
No 154
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=45.49 E-value=1.4e+02 Score=25.41 Aligned_cols=108 Identities=7% Similarity=-0.097 Sum_probs=58.8
Q ss_pred ceEEEEEeCCCCCCCEEEEEEcCCceeEE-EeCCCcccCcceeEec-CCe-EEEEEecCCCCCCeEEEEEEccCCCCCCC
Q 046476 212 GFIHWIITNPRKTKPVLAVFDVKEEKFDI-VKLPDEVRKHHDLIQA-EEK-LGVLDCDDFRSKNKIRVWILKDYGRGGGE 288 (376)
Q Consensus 212 G~lywl~~~~~~~~~~il~fDl~~e~~~~-i~~P~~~~~~~~L~~~-~g~-L~~~~~~~~~~~~~~~IW~l~~~~~g~~~ 288 (376)
+.+|.... . .+.|..||+++.+... +..+.. .. .+... +|+ |++.... ...+.+|-++..
T Consensus 10 ~~~~v~~~---~-~~~v~~~d~~~~~~~~~~~~~~~--~~-~~~~s~dg~~l~~~~~~----~~~i~~~d~~~~------ 72 (331)
T 3u4y_A 10 NFGIVVEQ---H-LRRISFFSTDTLEILNQITLGYD--FV-DTAITSDCSNVVVTSDF----CQTLVQIETQLE------ 72 (331)
T ss_dssp CEEEEEEG---G-GTEEEEEETTTCCEEEEEECCCC--EE-EEEECSSSCEEEEEEST----TCEEEEEECSSS------
T ss_pred CEEEEEec---C-CCeEEEEeCcccceeeeEEccCC--cc-eEEEcCCCCEEEEEeCC----CCeEEEEECCCC------
Confidence 44455443 1 6789999999887743 454432 12 44433 665 5555543 445656654432
Q ss_pred ceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCC-c--EEEEEeCCCCcEEEE
Q 046476 289 VWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLV-S--RVFIYDLKTQERRAI 344 (376)
Q Consensus 289 ~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~-~--~v~~ydl~t~~~~~v 344 (376)
.- .... +..... +...+++..+|+.++... .. . .+.+||+++++....
T Consensus 73 ~~-~~~~-~~~~~~---~~~~~~~s~dg~~l~~~~---~~~~~~~i~v~d~~~~~~~~~ 123 (331)
T 3u4y_A 73 PP-KVVA-IQEGQS---SMADVDITPDDQFAVTVT---GLNHPFNMQSYSFLKNKFIST 123 (331)
T ss_dssp SC-EEEE-EEECSS---CCCCEEECTTSSEEEECC---CSSSSCEEEEEETTTTEEEEE
T ss_pred ce-eEEe-cccCCC---CccceEECCCCCEEEEec---CCCCcccEEEEECCCCCeEEE
Confidence 11 1222 222111 112267778888776542 22 2 899999998876543
No 155
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=45.04 E-value=1.5e+02 Score=25.68 Aligned_cols=73 Identities=10% Similarity=0.094 Sum_probs=42.0
Q ss_pred CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeE-EEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEe
Q 046476 257 EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIR-RDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYD 335 (376)
Q Consensus 257 ~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~-~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~yd 335 (376)
+|.+.+.... ...+.||-+.... ......+ ... +..+.- ....+++..++.+++.. +.++.+.+||
T Consensus 38 d~~~l~sgs~----D~~v~iWd~~~~~--~~~~~~~~~~~-l~~h~~---~V~~~~~~~~~~~l~s~---s~D~~v~lwd 104 (343)
T 2xzm_R 38 DSPVLISGSR----DKTVMIWKLYEEE--QNGYFGIPHKA-LTGHNH---FVSDLALSQENCFAISS---SWDKTLRLWD 104 (343)
T ss_dssp CCCEEEEEET----TSCEEEEEECSSC--CSSBSEEEEEE-ECCCSS---CEEEEEECSSTTEEEEE---ETTSEEEEEE
T ss_pred CCCEEEEEcC----CCEEEEEECCcCC--cccccccccch-hccCCC---ceEEEEECCCCCEEEEE---cCCCcEEEEE
Confidence 5555555544 6889999987531 1111111 222 332221 22456677778777655 2688899999
Q ss_pred CCCCcEE
Q 046476 336 LKTQERR 342 (376)
Q Consensus 336 l~t~~~~ 342 (376)
+++++..
T Consensus 105 ~~~~~~~ 111 (343)
T 2xzm_R 105 LRTGTTY 111 (343)
T ss_dssp TTSSCEE
T ss_pred CCCCcEE
Confidence 9887653
No 156
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=44.78 E-value=1.5e+02 Score=25.38 Aligned_cols=114 Identities=10% Similarity=0.019 Sum_probs=60.2
Q ss_pred Cc-eEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcccCcceeE-ecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCC
Q 046476 211 NG-FIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEVRKHHDLI-QAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGE 288 (376)
Q Consensus 211 ~G-~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~-~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~ 288 (376)
+| .+||.... .+.|..+|.. ++.+.+..|... ...+. .-+|+|.++... ...+ +.++..|
T Consensus 55 ~g~~l~~~d~~----~~~i~~~~~~-g~~~~~~~~~~~--~~gl~~d~dG~l~v~~~~----~~~v--~~~~~~g----- 116 (305)
T 3dr2_A 55 AQRTLVWSDLV----GRRVLGWRED-GTVDVLLDATAF--TNGNAVDAQQRLVHCEHG----RRAI--TRSDADG----- 116 (305)
T ss_dssp GGTEEEEEETT----TTEEEEEETT-SCEEEEEESCSC--EEEEEECTTSCEEEEETT----TTEE--EEECTTS-----
T ss_pred CCCEEEEEECC----CCEEEEEeCC-CCEEEEeCCCCc--cceeeECCCCCEEEEECC----CCEE--EEECCCC-----
Confidence 45 48887651 5679999984 555655544421 12233 337887766543 3344 4444222
Q ss_pred ceeEEEEEeecccccccCcEeEEEccCCcEEEEecc--c------------CCCcEEEEEeCCCCcEEEE
Q 046476 289 VWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYK--S------------SLVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 289 ~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~--~------------~~~~~v~~ydl~t~~~~~v 344 (376)
.............. ....-+++..+|.+++.... . .....|+.||+++++++.+
T Consensus 117 ~~~~~~~~~~~~~~--~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~ 184 (305)
T 3dr2_A 117 QAHLLVGRYAGKRL--NSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRM 184 (305)
T ss_dssp CEEEEECEETTEEC--SCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEE
T ss_pred CEEEEEeccCCCcc--CCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEE
Confidence 23222210111111 11234677788998885210 0 0136799999988877665
No 157
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=44.07 E-value=1.6e+02 Score=25.55 Aligned_cols=106 Identities=12% Similarity=0.019 Sum_probs=56.2
Q ss_pred CEEEEEEcCCceeEEEeCCCcccCcceeEe-cCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecc----
Q 046476 226 PVLAVFDVKEEKFDIVKLPDEVRKHHDLIQ-AEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFD---- 300 (376)
Q Consensus 226 ~~il~fDl~~e~~~~i~~P~~~~~~~~L~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~---- 300 (376)
+.|+.+|..+.+...............+.. -+|.|+++... ...+.+|-.+ | +... +.. +...
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~----~~~v~~~~~~--g---~~~~--~~~-~~~~~~~g 136 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVA----LHQVFKLDPH--S---KEGP--LLI-LGRSMQPG 136 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETT----TTEEEEECTT--C---SSCC--SEE-ESBTTBCC
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECC----CCEEEEEeCC--C---CeEE--EEE-ecccCCCC
Confidence 468899998776644322111112223433 37888777654 4556655432 1 1112 223 3210
Q ss_pred --cccccCcEeEEEcc-CCcEEEEecccCCCcEEEEEeCCCCcEEEEE
Q 046476 301 --TIMFRPPIPVSNSN-NGEILLTEYKSSLVSRVFIYDLKTQERRAIK 345 (376)
Q Consensus 301 --~~~~~~~~~v~~~~-~g~il~~~~~~~~~~~v~~ydl~t~~~~~v~ 345 (376)
.-.+....-+++.. +|.+++... .....|..||.+.+....+.
T Consensus 137 ~~~~~~~~P~~ia~~~~~g~lyv~d~--~~~~~I~~~~~~g~~~~~~~ 182 (329)
T 3fvz_A 137 SDQNHFCQPTDVAVEPSTGAVFVSDG--YCNSRIVQFSPSGKFVTQWG 182 (329)
T ss_dssp CSTTCCSSEEEEEECTTTCCEEEEEC--SSCCEEEEECTTSCEEEEEC
T ss_pred CCccccCCCcEEEEeCCCCeEEEEeC--CCCCeEEEEcCCCCEEEEec
Confidence 00112123467776 788888761 13678999998776665553
No 158
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=43.54 E-value=1.8e+02 Score=25.95 Aligned_cols=198 Identities=14% Similarity=0.100 Sum_probs=95.3
Q ss_pred cccceEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCc
Q 046476 89 LINGFICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSS 168 (376)
Q Consensus 89 s~nGLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~ 168 (376)
+.+|-.++....+..+.|||..+++....-.... .....+.+.|.. .+ ++....
T Consensus 132 s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~----------------~~v~~~~~~p~~-~~-l~s~s~-------- 185 (393)
T 1erj_A 132 SPDGKFLATGAEDRLIRIWDIENRKIVMILQGHE----------------QDIYSLDYFPSG-DK-LVSGSG-------- 185 (393)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS----------------SCEEEEEECTTS-SE-EEEEET--------
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCC----------------CCEEEEEEcCCC-CE-EEEecC--------
Confidence 3455444444467789999999887654321111 133455555543 22 222211
Q ss_pred ccceecCCCCCeEEEEEcCCCCeeecCCCCCcceecCCceEE---CceEEEEEeCCCCCCCEEEEEEcCCceeEE-EeCC
Q 046476 169 YAWMIDNHGTPECEIFTLGTTSWRKIDAPPSRIHFRRQGLCA---NGFIHWIITNPRKTKPVLAVFDVKEEKFDI-VKLP 244 (376)
Q Consensus 169 ~~~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fDl~~e~~~~-i~~P 244 (376)
...+.+++.+++.-........ ....+.+ +|.+...+. .++.|..||+.+.+... +..+
T Consensus 186 ---------d~~v~iwd~~~~~~~~~~~~~~----~v~~~~~~~~~~~~l~~~s----~d~~v~iwd~~~~~~~~~~~~~ 248 (393)
T 1erj_A 186 ---------DRTVRIWDLRTGQCSLTLSIED----GVTTVAVSPGDGKYIAAGS----LDRAVRVWDSETGFLVERLDSE 248 (393)
T ss_dssp ---------TSEEEEEETTTTEEEEEEECSS----CEEEEEECSTTCCEEEEEE----TTSCEEEEETTTCCEEEEEC--
T ss_pred ---------CCcEEEEECCCCeeEEEEEcCC----CcEEEEEECCCCCEEEEEc----CCCcEEEEECCCCcEEEeeccc
Confidence 3567788877764322111100 0001111 454444443 16778999998865432 2222
Q ss_pred Ccc-----cCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCC------ceeEEEEEeecccccccCcEeEEE
Q 046476 245 DEV-----RKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGE------VWIRRDYVFRFDTIMFRPPIPVSN 312 (376)
Q Consensus 245 ~~~-----~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~------~W~~~~~ii~~~~~~~~~~~~v~~ 312 (376)
... ..-..+.-. +|.+.+.... ...+.||-++... ... ....... +..+. .....+++
T Consensus 249 ~~~~~~h~~~v~~v~~~~~g~~l~s~s~----d~~v~~wd~~~~~--~~~~~~~~~~~~~~~~-~~~h~---~~v~~~~~ 318 (393)
T 1erj_A 249 NESGTGHKDSVYSVVFTRDGQSVVSGSL----DRSVKLWNLQNAN--NKSDSKTPNSGTCEVT-YIGHK---DFVLSVAT 318 (393)
T ss_dssp ----CCCSSCEEEEEECTTSSEEEEEET----TSEEEEEEC-----------------CEEEE-EECCS---SCEEEEEE
T ss_pred ccCCCCCCCCEEEEEECCCCCEEEEEeC----CCEEEEEECCCCC--CcccccCCCCCcceEE-Eeccc---CcEEEEEE
Confidence 111 111222222 5665454443 7889999886531 000 0111112 11111 11244566
Q ss_pred ccCCcEEEEecccCCCcEEEEEeCCCCcEE
Q 046476 313 SNNGEILLTEYKSSLVSRVFIYDLKTQERR 342 (376)
Q Consensus 313 ~~~g~il~~~~~~~~~~~v~~ydl~t~~~~ 342 (376)
..++..++.. +.++.+.+||+++++..
T Consensus 319 ~~~~~~l~sg---s~D~~v~iwd~~~~~~~ 345 (393)
T 1erj_A 319 TQNDEYILSG---SKDRGVLFWDKKSGNPL 345 (393)
T ss_dssp CGGGCEEEEE---ETTSEEEEEETTTCCEE
T ss_pred CCCCCEEEEE---eCCCeEEEEECCCCeEE
Confidence 6777766654 26889999999987654
No 159
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=43.44 E-value=1.5e+02 Score=25.03 Aligned_cols=115 Identities=10% Similarity=0.044 Sum_probs=0.0
Q ss_pred CceEEEEEeCCCCCCCEEEEEEcC--CceeEEEeCCCcc-cCcceeEecC---CeEEEEEecCCCCCCeEEEEEEccCCC
Q 046476 211 NGFIHWIITNPRKTKPVLAVFDVK--EEKFDIVKLPDEV-RKHHDLIQAE---EKLGVLDCDDFRSKNKIRVWILKDYGR 284 (376)
Q Consensus 211 ~G~lywl~~~~~~~~~~il~fDl~--~e~~~~i~~P~~~-~~~~~L~~~~---g~L~~~~~~~~~~~~~~~IW~l~~~~~ 284 (376)
+|.+...+.. ++.|..||+. ...+..+..-... ..-..+.-.. |.+.+.... ...+.||-++....
T Consensus 22 ~~~~l~~~~~----dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~----dg~v~vwd~~~~~~ 93 (351)
T 3f3f_A 22 YGRHVATCSS----DQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASY----DKTVKLWEEDPDQE 93 (351)
T ss_dssp SSSEEEEEET----TSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEET----TSCEEEEEECTTSC
T ss_pred CCCEEEEeeC----CCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcC----CCeEEEEecCCCcc
Q ss_pred -CCCCceeEEEEEeecccccccCcEeEEEccC--CcEEEEecccCCCcEEEEEeCCCCc
Q 046476 285 -GGGEVWIRRDYVFRFDTIMFRPPIPVSNSNN--GEILLTEYKSSLVSRVFIYDLKTQE 340 (376)
Q Consensus 285 -g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~--g~il~~~~~~~~~~~v~~ydl~t~~ 340 (376)
.....|..... +..+.. ....+++..+ +..++... .++.+.+||+++.+
T Consensus 94 ~~~~~~~~~~~~-~~~~~~---~v~~~~~~~~~~~~~l~~~~---~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 94 ECSGRRWNKLCT-LNDSKG---SLYSVKFAPAHLGLKLACLG---NDGILRLYDALEPS 145 (351)
T ss_dssp TTSSCSEEEEEE-ECCCSS---CEEEEEECCGGGCSEEEEEE---TTCEEEEEECSSTT
T ss_pred cccccCcceeee-ecccCC---ceeEEEEcCCCCCcEEEEec---CCCcEEEecCCChH
No 160
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=43.35 E-value=1.5e+02 Score=24.95 Aligned_cols=96 Identities=7% Similarity=-0.002 Sum_probs=53.7
Q ss_pred CCEEEEEEcCCceeEEEeCCCcccCcceeEecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccc
Q 046476 225 KPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMF 304 (376)
Q Consensus 225 ~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~ 304 (376)
...|-.+|..+.....................++.+.++... ....+.||-++. ...+.. +..+.-
T Consensus 220 ~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~---~d~~i~iwd~~~--------~~~~~~-l~gH~~-- 285 (318)
T 4ggc_A 220 DRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGF---AQNQLVIWKYPT--------MAKVAE-LKGHTS-- 285 (318)
T ss_dssp TCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECT---TTCCEEEEETTT--------CCEEEE-ECCCSS--
T ss_pred CCEEEEEecccccccccccceeeeeeeeecccccceEEEEEc---CCCEEEEEECCC--------CcEEEE-EcCCCC--
Confidence 567788888876554432221110111112224445444433 267899996653 234455 443322
Q ss_pred cCcEeEEEccCCcEEEEecccCCCcEEEEEeCCC
Q 046476 305 RPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKT 338 (376)
Q Consensus 305 ~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t 338 (376)
....+++.++|..|+.. +.++.|.+||+.+
T Consensus 286 -~V~~l~~spdg~~l~S~---s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 286 -RVLSLTMSPDGATVASA---AADETLRLWRCFE 315 (318)
T ss_dssp -CEEEEEECTTSSCEEEE---ETTTEEEEECCSC
T ss_pred -CEEEEEEcCCCCEEEEE---ecCCeEEEEECCC
Confidence 23556777888877765 2688999999864
No 161
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=43.34 E-value=1.9e+02 Score=26.13 Aligned_cols=142 Identities=11% Similarity=0.026 Sum_probs=72.1
Q ss_pred cceEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCccc
Q 046476 91 NGFICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSYA 170 (376)
Q Consensus 91 nGLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~ 170 (376)
.+.|++. ....+...++.+++...+-... ....++.+|+..+. +.....
T Consensus 87 ~~~l~~~--~~~~I~~i~~~~~~~~~~~~~~-----------------~~~~gl~~d~~~~~--ly~~D~---------- 135 (386)
T 3v65_B 87 EPVLLFA--NRIDIRQVLPHRSEYTLLLNNL-----------------ENAIALDFHHRREL--VFWSDV---------- 135 (386)
T ss_dssp CCEEEEE--CBSCEEEECTTSCCCEEEECSC-----------------SCEEEEEEETTTTE--EEEEET----------
T ss_pred cceeEee--cCccceeeccCCCcEEEEecCC-----------------CccEEEEEecCCCe--EEEEeC----------
Confidence 4566665 4455666666665543322110 14567778876543 222211
Q ss_pred ceecCCCCCeEEEEEcCCCCeeecCCCCCcceecCCceEE---CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcc
Q 046476 171 WMIDNHGTPECEIFTLGTTSWRKIDAPPSRIHFRRQGLCA---NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEV 247 (376)
Q Consensus 171 ~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~ 247 (376)
....+..++..+...+.+.... .....++.+ +|.+||.-.. ...|..+|++...-..+.. ...
T Consensus 136 ------~~~~I~r~~~~g~~~~~~~~~~---~~~p~glavd~~~g~lY~~d~~----~~~I~~~~~dg~~~~~l~~-~~l 201 (386)
T 3v65_B 136 ------TLDRILRANLNGSNVEEVVSTG---LESPGGLAVDWVHDKLYWTDSG----TSRIEVANLDGAHRKVLLW-QSL 201 (386)
T ss_dssp ------TTTEEEEEETTSCCEEEEECSS---CSCCCCEEEETTTTEEEEEETT----TTEEEECBTTSCSCEEEEC-SSC
T ss_pred ------CCCcEEEEecCCCCcEEEEeCC---CCCccEEEEEeCCCeEEEEcCC----CCeEEEEeCCCCceEEeec-CCC
Confidence 1346667777665544432210 002234444 5899998651 5689999987654333321 111
Q ss_pred cCcceeEe--cCCeEEEEEecCCCCCCeEEEEEEccC
Q 046476 248 RKHHDLIQ--AEEKLGVLDCDDFRSKNKIRVWILKDY 282 (376)
Q Consensus 248 ~~~~~L~~--~~g~L~~~~~~~~~~~~~~~IW~l~~~ 282 (376)
.....|+. .+|.|++.... . .-.|++.+-.
T Consensus 202 ~~P~giavdp~~g~ly~td~~----~-~~~I~r~~~d 233 (386)
T 3v65_B 202 EKPRAIALHPMEGTIYWTDWG----N-TPRIEASSMD 233 (386)
T ss_dssp SCEEEEEEETTTTEEEEEECS----S-SCEEEEEETT
T ss_pred CCCcEEEEEcCCCeEEEeccC----C-CCEEEEEeCC
Confidence 11222333 47788777543 1 2346666543
No 162
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=43.26 E-value=1.6e+02 Score=25.36 Aligned_cols=142 Identities=11% Similarity=0.010 Sum_probs=78.6
Q ss_pred CCeEEEEEcCCCCeeecCCCCCcceecCCceEECceEEEEEeCCCCCCCEEEEEEcCCc-eeEEEeCCCcccCcceeEec
Q 046476 178 TPECEIFTLGTTSWRKIDAPPSRIHFRRQGLCANGFIHWIITNPRKTKPVLAVFDVKEE-KFDIVKLPDEVRKHHDLIQA 256 (376)
Q Consensus 178 ~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e-~~~~i~~P~~~~~~~~L~~~ 256 (376)
...+.+++..|++=......++.. +...-...++.+|-++.. .+.+.+||.++. .-..++.|.+ ...|..-
T Consensus 64 ~S~v~~vD~~Tgkv~~~~~l~~~~-FgeGit~~g~~ly~ltw~----~~~v~v~D~~t~~~~~ti~~~~e---G~glt~d 135 (262)
T 3nol_A 64 RSSIRKVDIESGKTLQQIELGKRY-FGEGISDWKDKIVGLTWK----NGLGFVWNIRNLRQVRSFNYDGE---GWGLTHN 135 (262)
T ss_dssp EEEEEEECTTTCCEEEEEECCTTC-CEEEEEEETTEEEEEESS----SSEEEEEETTTCCEEEEEECSSC---CCCEEEC
T ss_pred CceEEEEECCCCcEEEEEecCCcc-ceeEEEEeCCEEEEEEee----CCEEEEEECccCcEEEEEECCCC---ceEEecC
Confidence 457788888887533221221111 111123456799988872 678999999874 4456777653 2345555
Q ss_pred CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEE-eecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEe
Q 046476 257 EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYV-FRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYD 335 (376)
Q Consensus 257 ~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~i-i~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~yd 335 (376)
++.|++.... . .||.+|-. .. ..+.+| .......+....-+.. .+|+|+.... ..+.|...|
T Consensus 136 g~~L~~SdGs-----~--~i~~iDp~----T~--~v~~~I~V~~~g~~~~~lNELe~-~~G~lyan~w---~~~~I~vID 198 (262)
T 3nol_A 136 DQYLIMSDGT-----P--VLRFLDPE----SL--TPVRTITVTAHGEELPELNELEW-VDGEIFANVW---QTNKIVRID 198 (262)
T ss_dssp SSCEEECCSS-----S--EEEEECTT----TC--SEEEEEECEETTEECCCEEEEEE-ETTEEEEEET---TSSEEEEEC
T ss_pred CCEEEEECCC-----C--eEEEEcCC----CC--eEEEEEEeccCCccccccceeEE-ECCEEEEEEc---cCCeEEEEE
Confidence 6677766432 2 47887743 22 233331 2211110110011332 3688776552 577999999
Q ss_pred CCCCcEEEE
Q 046476 336 LKTQERRAI 344 (376)
Q Consensus 336 l~t~~~~~v 344 (376)
++|+++...
T Consensus 199 p~tG~V~~~ 207 (262)
T 3nol_A 199 PETGKVTGI 207 (262)
T ss_dssp TTTCBEEEE
T ss_pred CCCCcEEEE
Confidence 999987543
No 163
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=42.81 E-value=1.5e+02 Score=24.81 Aligned_cols=95 Identities=11% Similarity=0.134 Sum_probs=55.3
Q ss_pred CCEEEEEEcCCceeE-EEeCCCcccCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccc
Q 046476 225 KPVLAVFDVKEEKFD-IVKLPDEVRKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTI 302 (376)
Q Consensus 225 ~~~il~fDl~~e~~~-~i~~P~~~~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~ 302 (376)
++.|..||+.+.+.. .+..... .-..+.-. +|.|.. ... ...+.||-++.. .- ... +.....
T Consensus 204 dg~i~i~d~~~~~~~~~~~~~~~--~i~~~~~~~~~~l~~-~~~----dg~v~iwd~~~~------~~--~~~-~~~~~~ 267 (313)
T 3odt_A 204 DGLIKLVDMHTGDVLRTYEGHES--FVYCIKLLPNGDIVS-CGE----DRTVRIWSKENG------SL--KQV-ITLPAI 267 (313)
T ss_dssp TSEEEEEETTTCCEEEEEECCSS--CEEEEEECTTSCEEE-EET----TSEEEEECTTTC------CE--EEE-EECSSS
T ss_pred CCeEEEEECCchhhhhhhhcCCc--eEEEEEEecCCCEEE-Eec----CCEEEEEECCCC------ce--eEE-EeccCc
Confidence 778999999875443 3333222 12223333 554432 222 678999966542 22 222 222221
Q ss_pred cccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEE
Q 046476 303 MFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERR 342 (376)
Q Consensus 303 ~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~ 342 (376)
....+++..++.++... .++.+.+||++++++.
T Consensus 268 ---~i~~~~~~~~~~~~~~~----~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 268 ---SIWSVDCMSNGDIIVGS----SDNLVRIFSQEKSRWA 300 (313)
T ss_dssp ---CEEEEEECTTSCEEEEE----TTSCEEEEESCGGGCC
T ss_pred ---eEEEEEEccCCCEEEEe----CCCcEEEEeCCCCcee
Confidence 22456777788877655 7899999999988764
No 164
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=41.81 E-value=1.7e+02 Score=25.33 Aligned_cols=100 Identities=10% Similarity=-0.027 Sum_probs=55.2
Q ss_pred CCEEEEEEcCCcee-EEEeCCCcccCcceeEe-cCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccc
Q 046476 225 KPVLAVFDVKEEKF-DIVKLPDEVRKHHDLIQ-AEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTI 302 (376)
Q Consensus 225 ~~~il~fDl~~e~~-~~i~~P~~~~~~~~L~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~ 302 (376)
++.|..+|+.+.+. ..++.... ....+.- -+|.+.+.... ...+.||-++.. +........ +..+.-
T Consensus 76 Dg~v~iWd~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~s~~~----d~~v~iw~~~~~----~~~~~~~~~-~~~h~~ 144 (340)
T 1got_B 76 DGKLIIWDSYTTNKVHAIPLRSS--WVMTCAYAPSGNYVACGGL----DNICSIYNLKTR----EGNVRVSRE-LAGHTG 144 (340)
T ss_dssp TTEEEEEETTTCCEEEEEECSSS--CEEEEEECTTSSEEEEEET----TCEEEEEETTTC----SBSCEEEEE-EECCSS
T ss_pred CCcEEEEECCCCCcceEeecCCc--cEEEEEECCCCCEEEEEeC----CCeEEEEECccC----CCcceeEEE-ecCCCc
Confidence 67899999877543 33343322 1111222 25555444444 678999988653 223333333 333221
Q ss_pred cccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEE
Q 046476 303 MFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERR 342 (376)
Q Consensus 303 ~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~ 342 (376)
....+.+..++.++... .++.+.+||+++++..
T Consensus 145 ---~v~~~~~~~~~~l~s~s----~d~~i~~wd~~~~~~~ 177 (340)
T 1got_B 145 ---YLSCCRFLDDNQIVTSS----GDTTCALWDIETGQQT 177 (340)
T ss_dssp ---CEEEEEEEETTEEEEEE----TTSCEEEEETTTTEEE
T ss_pred ---cEEEEEECCCCcEEEEE----CCCcEEEEECCCCcEE
Confidence 11334445566666555 6888999999887654
No 165
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=40.77 E-value=1.9e+02 Score=25.57 Aligned_cols=197 Identities=10% Similarity=0.026 Sum_probs=97.8
Q ss_pred cccceEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCc
Q 046476 89 LINGFICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSS 168 (376)
Q Consensus 89 s~nGLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~ 168 (376)
+.+|-.++....+..+.|||..+++....-.... .....+.+.|.. .+ ++. ...
T Consensus 106 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~----------------~~v~~~~~~~~~-~~-l~s-~s~------- 159 (420)
T 3vl1_A 106 KLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHV----------------SEITKLKFFPSG-EA-LIS-SSQ------- 159 (420)
T ss_dssp CSSSCEEEEEETTSCEEEECTTSCEEEEETTSSS----------------SCEEEEEECTTS-SE-EEE-EET-------
T ss_pred ecCCCEEEEEECCCCEEEEeCCCcceeeeccccc----------------CccEEEEECCCC-CE-EEE-EeC-------
Confidence 3444344333366779999999887765432221 134455566643 22 222 211
Q ss_pred ccceecCCCCCeEEEEEcCCCCe-eecCCCCCcceecCCceEECceEEEEEeCCCCCCCEEEEEEcCCceeEE-EeCCCc
Q 046476 169 YAWMIDNHGTPECEIFTLGTTSW-RKIDAPPSRIHFRRQGLCANGFIHWIITNPRKTKPVLAVFDVKEEKFDI-VKLPDE 246 (376)
Q Consensus 169 ~~~~~~~~~~~~~~vys~~t~~W-r~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~-i~~P~~ 246 (376)
...+.+|+..++.= +....-.... ..-...-+|.....+. .++.|..||+.+.+... +..+..
T Consensus 160 ---------d~~i~iwd~~~~~~~~~~~~h~~~v--~~~~~~~~~~~l~s~~----~d~~v~iwd~~~~~~~~~~~~~~~ 224 (420)
T 3vl1_A 160 ---------DMQLKIWSVKDGSNPRTLIGHRATV--TDIAIIDRGRNVLSAS----LDGTIRLWECGTGTTIHTFNRKEN 224 (420)
T ss_dssp ---------TSEEEEEETTTCCCCEEEECCSSCE--EEEEEETTTTEEEEEE----TTSCEEEEETTTTEEEEEECBTTB
T ss_pred ---------CCeEEEEeCCCCcCceEEcCCCCcE--EEEEEcCCCCEEEEEc----CCCcEEEeECCCCceeEEeecCCC
Confidence 35678888876431 1111000000 0001111454433333 16779999998765433 332221
Q ss_pred c-cCcce---------------------e-EecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeec-ccc
Q 046476 247 V-RKHHD---------------------L-IQAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRF-DTI 302 (376)
Q Consensus 247 ~-~~~~~---------------------L-~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~-~~~ 302 (376)
. ..... + ..-+|.+.++... ...+.||-+... ..... +.. +..
T Consensus 225 ~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----dg~i~i~d~~~~--------~~~~~-~~~~~~~ 291 (420)
T 3vl1_A 225 PHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHV----SGVITVHNVFSK--------EQTIQ-LPSKFTC 291 (420)
T ss_dssp TTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEET----TSCEEEEETTTC--------CEEEE-ECCTTSS
T ss_pred CCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcC----CCeEEEEECCCC--------ceeEE-cccccCC
Confidence 1 00000 1 1125666555544 677999977642 12233 221 111
Q ss_pred cccCcEeEEEccCCc-EEEEecccCCCcEEEEEeCCCCc--EEEEE
Q 046476 303 MFRPPIPVSNSNNGE-ILLTEYKSSLVSRVFIYDLKTQE--RRAIK 345 (376)
Q Consensus 303 ~~~~~~~v~~~~~g~-il~~~~~~~~~~~v~~ydl~t~~--~~~v~ 345 (376)
....+++.+++. +++... .++.+.+||+++.+ +..+.
T Consensus 292 ---~v~~~~~~~~~~~~l~~g~---~dg~i~vwd~~~~~~~~~~~~ 331 (420)
T 3vl1_A 292 ---SCNSLTVDGNNANYIYAGY---ENGMLAQWDLRSPECPVGEFL 331 (420)
T ss_dssp ---CEEEEEECSSCTTEEEEEE---TTSEEEEEETTCTTSCSEEEE
T ss_pred ---CceeEEEeCCCCCEEEEEe---CCCeEEEEEcCCCcCchhhhh
Confidence 224567777776 555542 67899999998763 34443
No 166
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=39.51 E-value=1.9e+02 Score=25.25 Aligned_cols=105 Identities=18% Similarity=0.086 Sum_probs=58.0
Q ss_pred CCEEEEEEcCCce------eEEEeCCCc---ccCcceeEe-----cCCeE-EEEEecCCCCCCeEEEEEEcc------CC
Q 046476 225 KPVLAVFDVKEEK------FDIVKLPDE---VRKHHDLIQ-----AEEKL-GVLDCDDFRSKNKIRVWILKD------YG 283 (376)
Q Consensus 225 ~~~il~fDl~~e~------~~~i~~P~~---~~~~~~L~~-----~~g~L-~~~~~~~~~~~~~~~IW~l~~------~~ 283 (376)
++.|..||+.+.+ +..+..... ...-..+.- -+|.. .++... ...+.||-++. .
T Consensus 90 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~~~~~- 164 (397)
T 1sq9_A 90 SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDV----KGTTYIWKFHPFADESNS- 164 (397)
T ss_dssp TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEET----TSCEEEEEEESSSSHHHH-
T ss_pred CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeC----CCcEEEEeCCcccccccc-
Confidence 6778999988766 566654320 011222222 24555 444443 67899999886 3
Q ss_pred CCCCCceeEEEEEeec-----ccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEE
Q 046476 284 RGGGEVWIRRDYVFRF-----DTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERR 342 (376)
Q Consensus 284 ~g~~~~W~~~~~ii~~-----~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~ 342 (376)
....|..... +.. ... -.....+++..++ +++.. ..++.+.+||+++.+..
T Consensus 165 --~~~~~~~~~~-~~~~~~~~~~~-~~~i~~~~~~~~~-~l~~~---~~dg~i~i~d~~~~~~~ 220 (397)
T 1sq9_A 165 --LTLNWSPTLE-LQGTVESPMTP-SQFATSVDISERG-LIATG---FNNGTVQISELSTLRPL 220 (397)
T ss_dssp --TTTCCCCEEE-EEEEECCSSSS-CCCCCEEEECTTS-EEEEE---CTTSEEEEEETTTTEEE
T ss_pred --ceeeccCcce-eeeeeccccCC-CCCceEEEECCCc-eEEEE---eCCCcEEEEECCCCcee
Confidence 2344555444 321 000 0122456667777 55554 26789999999877554
No 167
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=39.45 E-value=1.9e+02 Score=24.97 Aligned_cols=117 Identities=12% Similarity=0.127 Sum_probs=64.7
Q ss_pred CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcc------------------cCcceeEec--CCeEEEEEecCCCC
Q 046476 211 NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEV------------------RKHHDLIQA--EEKLGVLDCDDFRS 270 (376)
Q Consensus 211 ~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~------------------~~~~~L~~~--~g~L~~~~~~~~~~ 270 (376)
+|.++|... ..+.|..||..+.++..+..+... .....+... +|.|+++...
T Consensus 29 ~g~~l~v~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~---- 100 (322)
T 2fp8_A 29 TNKGFYTSV----QDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY---- 100 (322)
T ss_dssp TCSSEEEEC----TTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT----
T ss_pred CCCEEEEEc----CCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC----
Confidence 577778765 157899999998888776543210 112234433 6788877543
Q ss_pred CCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEcc-CCcEEEEeccc--------------CCCcEEEEEe
Q 046476 271 KNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSN-NGEILLTEYKS--------------SLVSRVFIYD 335 (376)
Q Consensus 271 ~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~-~g~il~~~~~~--------------~~~~~v~~yd 335 (376)
.. |+.++.. ................ ....-+++.. +|.+++..... .....++.||
T Consensus 101 -~~--i~~~d~~----~g~~~~~~~~~~~~~~--~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 171 (322)
T 2fp8_A 101 -YH--LSVVGSE----GGHATQLATSVDGVPF--KWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYD 171 (322)
T ss_dssp -TE--EEEECTT----CEECEEEESEETTEEC--SCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEE
T ss_pred -CC--EEEEeCC----CCEEEEecccCCCCcc--cccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEe
Confidence 22 5555532 1222222110111111 1113367777 88888876210 1236799999
Q ss_pred CCCCcEEEE
Q 046476 336 LKTQERRAI 344 (376)
Q Consensus 336 l~t~~~~~v 344 (376)
+++++++.+
T Consensus 172 ~~~~~~~~~ 180 (322)
T 2fp8_A 172 PSTKETTLL 180 (322)
T ss_dssp TTTTEEEEE
T ss_pred CCCCEEEEe
Confidence 998877654
No 168
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=39.39 E-value=1.8e+02 Score=24.74 Aligned_cols=142 Identities=15% Similarity=0.048 Sum_probs=81.4
Q ss_pred CCeEEEEEcCCCCeeecCCCCCcceecCCceEECceEEEEEeCCCCCCCEEEEEEcCCce-eEEEeCCCcccCcceeEec
Q 046476 178 TPECEIFTLGTTSWRKIDAPPSRIHFRRQGLCANGFIHWIITNPRKTKPVLAVFDVKEEK-FDIVKLPDEVRKHHDLIQA 256 (376)
Q Consensus 178 ~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~-~~~i~~P~~~~~~~~L~~~ 256 (376)
...+.+++..|++=......+.. .+...-+..++.+|-++.. .+.+..||.++.+ -..++.|.+ ...|..-
T Consensus 42 ~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~----~~~v~v~D~~tl~~~~ti~~~~~---Gwglt~d 113 (243)
T 3mbr_X 42 RSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWR----NHEGFVYDLATLTPRARFRYPGE---GWALTSD 113 (243)
T ss_dssp SCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESS----SSEEEEEETTTTEEEEEEECSSC---CCEEEEC
T ss_pred CceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEee----CCEEEEEECCcCcEEEEEeCCCC---ceEEeeC
Confidence 57889999999764332222111 1111123457899999872 6889999998754 456777653 3456666
Q ss_pred CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEE-eecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEe
Q 046476 257 EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYV-FRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYD 335 (376)
Q Consensus 257 ~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~i-i~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~yd 335 (376)
+++|++...+ . .|++++-. ... .+.+| +......+...--+. +.+|+|+.... ..+.|...|
T Consensus 114 g~~L~vSdgs-----~--~l~~iDp~----t~~--~~~~I~V~~~g~~~~~lNeLe-~~~G~lyanvw---~s~~I~vID 176 (243)
T 3mbr_X 114 DSHLYMSDGT-----A--VIRKLDPD----TLQ--QVGSIKVTAGGRPLDNLNELE-WVNGELLANVW---LTSRIARID 176 (243)
T ss_dssp SSCEEEECSS-----S--EEEEECTT----TCC--EEEEEECEETTEECCCEEEEE-EETTEEEEEET---TTTEEEEEC
T ss_pred CCEEEEECCC-----C--eEEEEeCC----CCe--EEEEEEEccCCcccccceeeE-EeCCEEEEEEC---CCCeEEEEE
Confidence 7778777532 2 47777743 222 33331 221111011111122 23778775542 467899999
Q ss_pred CCCCcEEEE
Q 046476 336 LKTQERRAI 344 (376)
Q Consensus 336 l~t~~~~~v 344 (376)
++|+++...
T Consensus 177 p~tG~V~~~ 185 (243)
T 3mbr_X 177 PASGKVVAW 185 (243)
T ss_dssp TTTCBEEEE
T ss_pred CCCCCEEEE
Confidence 999887543
No 169
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=38.96 E-value=1.8e+02 Score=24.71 Aligned_cols=101 Identities=11% Similarity=0.028 Sum_probs=50.9
Q ss_pred CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcccCcceeEe-cCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCc
Q 046476 211 NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQ-AEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEV 289 (376)
Q Consensus 211 ~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~ 289 (376)
+|.+|.-+. .+.|.+||...+....+..+... ...+.. -+|.|++.... . .|..++.. .+..
T Consensus 225 ~g~l~v~t~-----~~gl~~~~~~g~~~~~~~~~~~~--~~~~~~~~~g~l~v~t~~-----g--gl~~~d~~---g~~~ 287 (330)
T 3hxj_A 225 DGTIYVTSL-----DGHLYAINPDGTEKWRFKTGKRI--ESSPVIGNTDTIYFGSYD-----G--HLYAINPD---GTEK 287 (330)
T ss_dssp TSCEEEEET-----TTEEEEECTTSCEEEEEECSSCC--CSCCEECTTSCEEEECTT-----C--EEEEECTT---SCEE
T ss_pred CCeEEEEcC-----CCeEEEECCCCCEeEEeeCCCCc--cccceEcCCCeEEEecCC-----C--CEEEECCC---CcEE
Confidence 455555443 57888898766666555544322 112333 37777766532 1 24455543 2344
Q ss_pred eeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCc
Q 046476 290 WIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQE 340 (376)
Q Consensus 290 W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~ 340 (376)
|.. . ++... ...+....+|.+++.. .++.+.+...+.++
T Consensus 288 ~~~--~-~~~~~-----~~~~~~d~~g~l~~gt----~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 288 WNF--E-TGSWI-----IATPVIDENGTIYFGT----RNGKFYALFNLEHH 326 (330)
T ss_dssp EEE--E-CSSCC-----CSCCEECTTCCEEEEC----TTSCEEEEEC----
T ss_pred EEE--E-cCCcc-----ccceEEcCCCEEEEEc----CCCeEEEEeccccc
Confidence 543 2 22211 1233445678888877 56666666555443
No 170
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=37.38 E-value=2.1e+02 Score=27.97 Aligned_cols=61 Identities=16% Similarity=0.179 Sum_probs=38.4
Q ss_pred CCeEEEEEEccCCCCCCCceeE-EEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEE
Q 046476 271 KNKIRVWILKDYGRGGGEVWIR-RDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERR 342 (376)
Q Consensus 271 ~~~~~IW~l~~~~~g~~~~W~~-~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~ 342 (376)
...+.||-++.. ...+.. ... +..+.- ....+++..++..++.. +.++.|.+||+++++..
T Consensus 404 D~~i~~W~~~~~----~~~~~~~~~~-~~~h~~---~v~~v~~s~~g~~l~sg---s~Dg~v~vwd~~~~~~~ 465 (694)
T 3dm0_A 404 DKSIILWKLTKD----DKAYGVAQRR-LTGHSH---FVEDVVLSSDGQFALSG---SWDGELRLWDLAAGVST 465 (694)
T ss_dssp TSEEEEEECCCS----TTCSCEEEEE-EECCSS---CEEEEEECTTSSEEEEE---ETTSEEEEEETTTTEEE
T ss_pred CCcEEEEEccCC----Ccccccccce-ecCCCC---cEEEEEECCCCCEEEEE---eCCCcEEEEECCCCcce
Confidence 678999998754 222322 222 333322 22456777788877765 26889999999887654
No 171
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=37.13 E-value=1.9e+02 Score=24.51 Aligned_cols=100 Identities=10% Similarity=0.057 Sum_probs=55.2
Q ss_pred CCEEEEEEcCCceeEE-EeCCCcccCcceeE--ec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecc
Q 046476 225 KPVLAVFDVKEEKFDI-VKLPDEVRKHHDLI--QA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFD 300 (376)
Q Consensus 225 ~~~il~fDl~~e~~~~-i~~P~~~~~~~~L~--~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~ 300 (376)
++.|..+|+.+.+-.. +..... .....+. .. ++.+.+.... ...+.||-++.. ..... +..+
T Consensus 162 D~~v~iwd~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~s~s~----D~~i~iWd~~~~--------~~~~~-~~~h 227 (304)
T 2ynn_A 162 DRTVKVWSLGQSTPNFTLTTGQE-RGVNYVDYYPLPDKPYMITASD----DLTIKIWDYQTK--------SCVAT-LEGH 227 (304)
T ss_dssp TSEEEEEETTCSSCSEEEECCCT-TCEEEEEECCSTTCCEEEEEET----TSEEEEEETTTT--------EEEEE-EECC
T ss_pred CCeEEEEECCCCCccceeccCCc-CcEEEEEEEEcCCCCEEEEEcC----CCeEEEEeCCCC--------cccee-eCCC
Confidence 6789999987643221 111110 0011111 11 3444444433 788999976532 23344 3433
Q ss_pred cccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEEEE
Q 046476 301 TIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 301 ~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~~v 344 (376)
.. ....+++.+++.+++.. +.++.|.+||+++.+....
T Consensus 228 ~~---~v~~~~~~p~~~~l~s~---s~Dg~i~iWd~~~~~~~~~ 265 (304)
T 2ynn_A 228 MS---NVSFAVFHPTLPIIISG---SEDGTLKIWNSSTYKVEKT 265 (304)
T ss_dssp SS---CEEEEEECSSSSEEEEE---ETTSCEEEEETTTCCEEEE
T ss_pred CC---CEEEEEECCCCCEEEEE---cCCCeEEEEECCCCceeee
Confidence 22 22445677788777665 2688999999999877654
No 172
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=36.47 E-value=2e+02 Score=24.46 Aligned_cols=132 Identities=13% Similarity=0.073 Sum_probs=62.7
Q ss_pred CeEEEEEc-CCCCeeecCC--CCCcceecCCceEE--CceEEEEEeCCCCCCCEEEEEEcCC---------cee-EEEeC
Q 046476 179 PECEIFTL-GTTSWRKIDA--PPSRIHFRRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKE---------EKF-DIVKL 243 (376)
Q Consensus 179 ~~~~vys~-~t~~Wr~~~~--~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~---------e~~-~~i~~ 243 (376)
..+.+|+. .++.-..... ...... .+.+ ++.+.--+. ++.|..||+.+ .+. ..+..
T Consensus 79 g~i~~wd~~~~~~~~~~~~~~~~~~v~----~l~~~~~~~l~s~~~-----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 149 (342)
T 1yfq_A 79 GEILKVDLIGSPSFQALTNNEANLGIC----RICKYGDDKLIAASW-----DGLIEVIDPRNYGDGVIAVKNLNSNNTKV 149 (342)
T ss_dssp SCEEEECSSSSSSEEECBSCCCCSCEE----EEEEETTTEEEEEET-----TSEEEEECHHHHTTBCEEEEESCSSSSSS
T ss_pred CeEEEEEeccCCceEeccccCCCCceE----EEEeCCCCEEEEEcC-----CCeEEEEcccccccccccccCCeeeEEee
Confidence 56788888 7766555443 211111 1111 233333222 67899999875 221 11111
Q ss_pred CCcccCcceeEecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEcc-CCcEEEEe
Q 046476 244 PDEVRKHHDLIQAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSN-NGEILLTE 322 (376)
Q Consensus 244 P~~~~~~~~L~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~-~g~il~~~ 322 (376)
+ .....+....+.| ++... ...+.+|-++..+ ....... . ..... ....+++.. ++..++..
T Consensus 150 ~---~~v~~~~~~~~~l-~~~~~----d~~i~i~d~~~~~---~~~~~~~-~--~~~~~---~i~~i~~~~~~~~~l~~~ 212 (342)
T 1yfq_A 150 K---NKIFTMDTNSSRL-IVGMN----NSQVQWFRLPLCE---DDNGTIE-E--SGLKY---QIRDVALLPKEQEGYACS 212 (342)
T ss_dssp C---CCEEEEEECSSEE-EEEES----TTEEEEEESSCCT---TCCCEEE-E--CSCSS---CEEEEEECSGGGCEEEEE
T ss_pred C---CceEEEEecCCcE-EEEeC----CCeEEEEECCccc---cccceee-e--cCCCC---ceeEEEECCCCCCEEEEE
Confidence 1 1122233334443 23322 6789999887511 1112111 1 11111 224556666 66655554
Q ss_pred cccCCCcEEEEEeCCCC
Q 046476 323 YKSSLVSRVFIYDLKTQ 339 (376)
Q Consensus 323 ~~~~~~~~v~~ydl~t~ 339 (376)
. .++.+.+||.+++
T Consensus 213 ~---~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 213 S---IDGRVAVEFFDDQ 226 (342)
T ss_dssp E---TTSEEEEEECCTT
T ss_pred e---cCCcEEEEEEcCC
Confidence 2 5778888777654
No 173
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=35.76 E-value=2.2e+02 Score=24.73 Aligned_cols=118 Identities=14% Similarity=0.141 Sum_probs=61.0
Q ss_pred CceEEEEEeCCCCCCCEEEEEEcCCce-------e------EEEeCCCcccCcceeEe-cCCe-EEEEEecCCCCCCeEE
Q 046476 211 NGFIHWIITNPRKTKPVLAVFDVKEEK-------F------DIVKLPDEVRKHHDLIQ-AEEK-LGVLDCDDFRSKNKIR 275 (376)
Q Consensus 211 ~G~lywl~~~~~~~~~~il~fDl~~e~-------~------~~i~~P~~~~~~~~L~~-~~g~-L~~~~~~~~~~~~~~~ 275 (376)
+|...+.+. .+ .+.|..||+.... + ..+..+..... ..+.. -+|+ |+++... ...+.
T Consensus 165 dg~~l~~~~--~~-~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~spdg~~l~v~~~~----~~~v~ 236 (361)
T 3scy_A 165 DGKYLLADD--LG-TDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGP-RHLIFNSDGKFAYLINEI----GGTVI 236 (361)
T ss_dssp TSSEEEEEE--TT-TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCE-EEEEECTTSSEEEEEETT----TCEEE
T ss_pred CCCEEEEEe--CC-CCEEEEEEEcCCCCcccccceeecccccceecCCCCCC-eEEEEcCCCCEEEEEcCC----CCeEE
Confidence 676333333 12 5678888877543 3 23344433211 22333 3676 5555433 67899
Q ss_pred EEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCC-CcEEEEEeCC--CCcEEEEE
Q 046476 276 VWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSL-VSRVFIYDLK--TQERRAIK 345 (376)
Q Consensus 276 IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~-~~~v~~ydl~--t~~~~~v~ 345 (376)
+|.++. ........ +....-......-+++..+|+.++... .. ...+.+|+++ +++++.+.
T Consensus 237 v~~~~~------g~~~~~~~-~~~~~~~~~~~~~i~~spdg~~l~v~~--~~~~~~i~v~~~~~~~g~~~~~~ 300 (361)
T 3scy_A 237 AFRYAD------GMLDEIQT-VAADTVNAQGSGDIHLSPDGKYLYASN--RLKADGVAIFKVDETNGTLTKVG 300 (361)
T ss_dssp EEEEET------TEEEEEEE-EESCSSCCCCEEEEEECTTSSEEEEEE--CSSSCEEEEEEECTTTCCEEEEE
T ss_pred EEEecC------CceEEeEE-EecCCCCCCCcccEEECCCCCEEEEEC--CCCCCEEEEEEEcCCCCcEEEee
Confidence 998873 23444444 332211011123567788888665442 13 4678887774 66665553
No 174
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=34.90 E-value=4.2e+02 Score=27.80 Aligned_cols=104 Identities=14% Similarity=0.098 Sum_probs=57.3
Q ss_pred ECceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcccCcceeEe-cCCeEEEEEecCCCCCCeEEEEEEccCCCCCCC
Q 046476 210 ANGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQ-AEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGE 288 (376)
Q Consensus 210 ~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~ 288 (376)
-+|.....+. .+.+..||+.+.................+.- -+|.+.++... ...+.||-++..
T Consensus 808 ~dg~~l~~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~----dg~v~vwd~~~~------ 872 (1249)
T 3sfz_A 808 ADGDKIIVAA-----KNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALS----QYCVELWNIDSR------ 872 (1249)
T ss_dssp TTSSEEEEEE-----TTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECS----SSCEEEEETTTT------
T ss_pred CCCCEEEEEc-----CCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeC----CCeEEEEEcCCC------
Confidence 3666666666 6789999998876543322111111222222 25666555544 678999976642
Q ss_pred ceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCC
Q 046476 289 VWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLK 337 (376)
Q Consensus 289 ~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~ 337 (376)
..... +..+.. ....+++..+|..++... .++.+.+||++
T Consensus 873 --~~~~~-~~~h~~---~v~~v~~spdg~~l~s~s---~dg~v~vw~~~ 912 (1249)
T 3sfz_A 873 --LKVAD-CRGHLS---WVHGVMFSPDGSSFLTAS---DDQTIRVWETK 912 (1249)
T ss_dssp --EEEEE-ECCCSS---CEEEEEECTTSSEEEEEE---TTSCEEEEEHH
T ss_pred --ceeee-cCCCcc---ceEEEEECCCCCEEEEEe---CCCeEEEEEcc
Confidence 22333 332221 224556666776555441 56778888765
No 175
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=34.86 E-value=3.5e+02 Score=26.78 Aligned_cols=191 Identities=13% Similarity=0.111 Sum_probs=97.2
Q ss_pred eecccccceEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCC
Q 046476 85 RVTQLINGFICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTT 164 (376)
Q Consensus 85 ~~~~s~nGLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~ 164 (376)
.+....+|.|-+. ....++.+||.|+++.. |...... ....+. +. +. -+.+.+.
T Consensus 67 ~i~~d~~g~lWig--T~~Gl~~yd~~~~~f~~-~~~~~~~---------------~i~~i~-~~--~g--~lWigt~--- 120 (758)
T 3ott_A 67 CGVIIDNTYLYMG--TDNGILVYNYRADRYEQ-PETDFPT---------------DVRTMA-LQ--GD--TLWLGAL--- 120 (758)
T ss_dssp EEEEETTTEEEEE--ETTEEEEEETTTTEECC-CSCCCCS---------------CEEEEE-EE--TT--EEEEEET---
T ss_pred EEEEcCCCcEEEE--eCCCeEEEeCCCCEEEC-cccCCCc---------------eEEEEE-ec--CC--cEEEEcC---
Confidence 3444567877777 45678999999987764 2111100 111111 11 11 2333321
Q ss_pred CCCcccceecCCCCCeEEEEEcCCCCeeecCCCCCccee-cCCceEE--CceEEEEEeCCCCCCCEEEEEEcCCceeEEE
Q 046476 165 NSSSYAWMIDNHGTPECEIFTLGTTSWRKIDAPPSRIHF-RRQGLCA--NGFIHWIITNPRKTKPVLAVFDVKEEKFDIV 241 (376)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~-~~~~v~~--~G~lywl~~~~~~~~~~il~fDl~~e~~~~i 241 (376)
..+..|+..++.............. .-..++. +|. .|++. ...+..||..+.++..+
T Consensus 121 --------------~Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt-----~~Gl~~~~~~~~~~~~~ 180 (758)
T 3ott_A 121 --------------NGLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQ-IYVGT-----YNGLCRYIPSNGKFEGI 180 (758)
T ss_dssp --------------TEEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCC-EEEEE-----TTEEEEEETTTTEEEEE
T ss_pred --------------CcceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCC-EEEEe-----CCCHhhCccCCCceEEe
Confidence 2566777777666544210000000 1112333 355 46666 45799999999999888
Q ss_pred eCCCcc--c--CcceeEec-CC-eEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccC
Q 046476 242 KLPDEV--R--KHHDLIQA-EE-KLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNN 315 (376)
Q Consensus 242 ~~P~~~--~--~~~~L~~~-~g-~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~ 315 (376)
..|... . ....+.+- +| .|.+.... .|..++.. ...+..... ++... ...+....+
T Consensus 181 ~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~--------Gl~~~~~~----~~~~~~~~~-l~~~~-----i~~i~~d~~ 242 (758)
T 3ott_A 181 PLPVHSSQSNLFVNSLLEDTTRQCVWIGTEG--------YLFQYFPS----TGQIKQTEA-FHNNS-----IKSLALDGN 242 (758)
T ss_dssp CCCCCTTCSSCCEEEEEEETTTTEEEEEEEE--------EEEEEETT----TTEEEEEEE-EEEEE-----EEEEEECTT
T ss_pred cCCCccccccceeEEEEEECCCCEEEEEECC--------CCeEEcCC----CCeEEeccC-CCCCe-----EEEEEEcCC
Confidence 776432 0 11123332 23 35554311 24555432 234443333 22111 134455567
Q ss_pred CcEEEEecccCCCcEEEEEeCCCCcEEEE
Q 046476 316 GEILLTEYKSSLVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 316 g~il~~~~~~~~~~~v~~ydl~t~~~~~v 344 (376)
|.|++.+ ...++.||+++++++.+
T Consensus 243 g~lWigT-----~~Gl~~~~~~~~~~~~~ 266 (758)
T 3ott_A 243 GDLLAGT-----DNGLYVYHNDTTPLQHI 266 (758)
T ss_dssp CCEEEEE-----TTEEEEECCTTSCCEEE
T ss_pred CCEEEEe-----CCceeEEecCCCcEEEE
Confidence 8888877 34788899888776654
No 176
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=34.47 E-value=82 Score=23.24 Aligned_cols=43 Identities=7% Similarity=0.193 Sum_probs=30.7
Q ss_pred CcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEE
Q 046476 101 GFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNIS 159 (376)
Q Consensus 101 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~ 159 (376)
.-.+++.+|.|+.|. |...... .....+..|...+.|+|+...
T Consensus 10 ~A~V~~~d~~~~~W~--p~~~~~g--------------~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 10 RAAVMVYDDANKKWV--PAGGSTG--------------FSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEEEETTTTEEE--EGGGCCS--------------CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEEcCCCCceE--ECCCCCC--------------ceEEEEEEECCCCEEEEEEEE
Confidence 346788999999775 4332111 266788899888899999876
No 177
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=34.15 E-value=2.3e+02 Score=24.52 Aligned_cols=205 Identities=11% Similarity=-0.050 Sum_probs=97.2
Q ss_pred ccccceEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCC
Q 046476 88 QLINGFICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSS 167 (376)
Q Consensus 88 ~s~nGLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~ 167 (376)
...+|.+.+.......+++++|.+++...++.+. ...++.+++.. . ++...
T Consensus 57 ~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~------------------~v~~i~~~~dg-~--l~v~~-------- 107 (326)
T 2ghs_A 57 DPASGTAWWFNILERELHELHLASGRKTVHALPF------------------MGSALAKISDS-K--QLIAS-------- 107 (326)
T ss_dssp ETTTTEEEEEEGGGTEEEEEETTTTEEEEEECSS------------------CEEEEEEEETT-E--EEEEE--------
T ss_pred eCCCCEEEEEECCCCEEEEEECCCCcEEEEECCC------------------cceEEEEeCCC-e--EEEEE--------
Confidence 3344656555445678999999998776543211 22334455432 2 22211
Q ss_pred cccceecCCCCCeEEEEEcCCCCeeecCCCCCcce-ecCCceEE--CceEEEEEeCCC--CCCCEEEEEEcCCceeEEEe
Q 046476 168 SYAWMIDNHGTPECEIFTLGTTSWRKIDAPPSRIH-FRRQGLCA--NGFIHWIITNPR--KTKPVLAVFDVKEEKFDIVK 242 (376)
Q Consensus 168 ~~~~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~-~~~~~v~~--~G~lywl~~~~~--~~~~~il~fDl~~e~~~~i~ 242 (376)
...+.+|+..++..+.+........ .....+.+ +|.+|+-..... .....|..+| +.++..+.
T Consensus 108 ----------~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~ 175 (326)
T 2ghs_A 108 ----------DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLF 175 (326)
T ss_dssp ----------TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEE
T ss_pred ----------CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEee
Confidence 1236777877777765432211000 01112222 577655332100 0135788899 45665442
Q ss_pred CCCcccCcceeEec-CCe-EEEEEecCCCCCCeEEEEEEc-cCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEE
Q 046476 243 LPDEVRKHHDLIQA-EEK-LGVLDCDDFRSKNKIRVWILK-DYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEIL 319 (376)
Q Consensus 243 ~P~~~~~~~~L~~~-~g~-L~~~~~~~~~~~~~~~IW~l~-~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il 319 (376)
- .......+... +|+ |+++... ...+.+|-++ +.| ....=.+....++... ....-+++..+|.++
T Consensus 176 ~--~~~~~~~i~~s~dg~~lyv~~~~----~~~I~~~d~~~~~G--l~~~~~~~~~~~~~~~---~~p~gi~~d~~G~lw 244 (326)
T 2ghs_A 176 A--DISIPNSICFSPDGTTGYFVDTK----VNRLMRVPLDARTG--LPTGKAEVFIDSTGIK---GGMDGSVCDAEGHIW 244 (326)
T ss_dssp E--EESSEEEEEECTTSCEEEEEETT----TCEEEEEEBCTTTC--CBSSCCEEEEECTTSS---SEEEEEEECTTSCEE
T ss_pred C--CCcccCCeEEcCCCCEEEEEECC----CCEEEEEEcccccC--CcccCceEEEECCCCC---CCCCeeEECCCCCEE
Confidence 1 11111123333 564 6665432 3455555443 111 0100011111022111 101234566678888
Q ss_pred EEecccCCCcEEEEEeCCCCcEEEEEEC
Q 046476 320 LTEYKSSLVSRVFIYDLKTQERRAIKIP 347 (376)
Q Consensus 320 ~~~~~~~~~~~v~~ydl~t~~~~~v~~~ 347 (376)
+... ....|..||++.+..+.+...
T Consensus 245 va~~---~~~~v~~~d~~g~~~~~i~~~ 269 (326)
T 2ghs_A 245 NARW---GEGAVDRYDTDGNHIARYEVP 269 (326)
T ss_dssp EEEE---TTTEEEEECTTCCEEEEEECS
T ss_pred EEEe---CCCEEEEECCCCCEEEEEECC
Confidence 7762 457899999977777776554
No 178
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=34.01 E-value=3.5e+02 Score=26.64 Aligned_cols=148 Identities=11% Similarity=0.052 Sum_probs=81.0
Q ss_pred CCeEEEEEcCCC--C-eeecCCCCCcceecCCceE-ECceEEEEEeCCCCCCCEEEEEEcCC--ceeEEEeCCCcccCcc
Q 046476 178 TPECEIFTLGTT--S-WRKIDAPPSRIHFRRQGLC-ANGFIHWIITNPRKTKPVLAVFDVKE--EKFDIVKLPDEVRKHH 251 (376)
Q Consensus 178 ~~~~~vys~~t~--~-Wr~~~~~~~~~~~~~~~v~-~~G~lywl~~~~~~~~~~il~fDl~~--e~~~~i~~P~~~~~~~ 251 (376)
...+.+++..++ . |+.+...... ....+. -++.+|+.+.. ......|+.+|+++ ++|..+- |.......
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~---~~~~~~~dg~~l~~~s~~-~~~~~~l~~~d~~~~~~~~~~l~-~~~~~~l~ 367 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKA---QWDFVDGVGDQLWFVSGD-GAPLKKIVRVDLSGSTPRFDTVV-PESKDNLE 367 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSS---CEEEEEEETTEEEEEECT-TCTTCEEEEEECSSSSCEEEEEE-CCCSSEEE
T ss_pred cceEEEEECCCCCCcccEEecCCCCc---eEEEEeccCCEEEEEECC-CCCCCEEEEEeCCCCccccEEEe-cCCCCeEE
Confidence 457777888776 6 8776543211 111122 34567777652 11257799999988 5777654 32211111
Q ss_pred eeEecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCc-EEEEecccCCCcE
Q 046476 252 DLIQAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGE-ILLTEYKSSLVSR 330 (376)
Q Consensus 252 ~L~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~-il~~~~~~~~~~~ 330 (376)
.+...++.|.+.... .....||+++-.| + .... +..... .....++...++. +++..........
T Consensus 368 ~~~~~~~~lv~~~~~----dg~~~l~~~~~~g---~----~~~~-l~~~~~--~~v~~~~~s~d~~~l~~~~ss~~~P~~ 433 (741)
T 1yr2_A 368 SVGIAGNRLFASYIH----DAKSQVLAFDLDG---K----PAGA-VSLPGI--GSASGLSGRPGDRHAYLSFSSFTQPAT 433 (741)
T ss_dssp EEEEEBTEEEEEEEE----TTEEEEEEEETTS---C----EEEE-CBCSSS--CEEEEEECCBTCSCEEEEEEETTEEEE
T ss_pred EEEEECCEEEEEEEE----CCEEEEEEEeCCC---C----ceee-ccCCCC--eEEEEeecCCCCCEEEEEEcCCCCCCE
Confidence 233347888777665 5677889887432 1 2223 321111 1112234444554 5555433345678
Q ss_pred EEEEeCCCCcEEEE
Q 046476 331 VFIYDLKTQERRAI 344 (376)
Q Consensus 331 v~~ydl~t~~~~~v 344 (376)
++.||+++++.+.+
T Consensus 434 i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 434 VLALDPATAKTTPW 447 (741)
T ss_dssp EEEEETTTTEEEEC
T ss_pred EEEEECCCCcEEEE
Confidence 99999999886544
No 179
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=33.56 E-value=2.6e+02 Score=25.02 Aligned_cols=65 Identities=11% Similarity=0.054 Sum_probs=39.1
Q ss_pred CeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCC
Q 046476 258 EKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLK 337 (376)
Q Consensus 258 g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~ 337 (376)
|.+.+.... ...+.||-+... ..... +..+.- ....+++..+|..++.. +.++.|.+||++
T Consensus 308 g~~l~sgs~----D~~i~iwd~~~~--------~~~~~-~~~h~~---~v~~v~~~~~g~~l~s~---s~D~~i~vwd~~ 368 (410)
T 1vyh_C 308 GPFLLSGSR----DKTIKMWDVSTG--------MCLMT-LVGHDN---WVRGVLFHSGGKFILSC---ADDKTLRVWDYK 368 (410)
T ss_dssp CCEEEEEET----TSEEEEEETTTT--------EEEEE-EECCSS---CEEEEEECSSSSCEEEE---ETTTEEEEECCT
T ss_pred CCEEEEEeC----CCeEEEEECCCC--------ceEEE-EECCCC---cEEEEEEcCCCCEEEEE---eCCCeEEEEECC
Confidence 445444444 678999976532 12333 332221 22456777778766655 268899999998
Q ss_pred CCcE
Q 046476 338 TQER 341 (376)
Q Consensus 338 t~~~ 341 (376)
+++.
T Consensus 369 ~~~~ 372 (410)
T 1vyh_C 369 NKRC 372 (410)
T ss_dssp TSCC
T ss_pred CCce
Confidence 7654
No 180
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=33.52 E-value=2.3e+02 Score=24.37 Aligned_cols=108 Identities=12% Similarity=0.117 Sum_probs=57.3
Q ss_pred CCEEEEEEcCCceeEEEe-CCCcccCcceeEec-C--CeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeec-
Q 046476 225 KPVLAVFDVKEEKFDIVK-LPDEVRKHHDLIQA-E--EKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRF- 299 (376)
Q Consensus 225 ~~~il~fDl~~e~~~~i~-~P~~~~~~~~L~~~-~--g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~- 299 (376)
++.|..+|+.++.+..+. +......-..+.-. + +.+.+.... ...+.||-++.........|..... ++.
T Consensus 174 D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~----D~~v~iw~~~~~~~~~~~~~~~~~~-~~~~ 248 (330)
T 2hes_X 174 DDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSD----DSTVRVWKYMGDDEDDQQEWVCEAI-LPDV 248 (330)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEET----TSCEEEEEEEEECTTSCEEEEEEEE-CCSC
T ss_pred CCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeC----CCeEEEEEecCCCccccceeEEeee-cccc
Confidence 667888888776554432 21111111112222 2 333233333 6789999886431112346766665 442
Q ss_pred ccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEEEE
Q 046476 300 DTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 300 ~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~~v 344 (376)
+.. ....+++..++.++-.. .++.|.+||.++++++.+
T Consensus 249 h~~---~v~~v~~s~~~~l~s~~----~dg~v~iw~~~~~~~~~~ 286 (330)
T 2hes_X 249 HKR---QVYNVAWGFNGLIASVG----ADGVLAVYEEVDGEWKVF 286 (330)
T ss_dssp CSS---CEEEEEECTTSCEEEEE----TTSCEEEEEEETTEEEEE
T ss_pred ccc---ceEEEEEcCCCEEEEEe----CCCEEEEEEcCCCceEEE
Confidence 221 22455655555444444 688899999988866544
No 181
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=33.39 E-value=72 Score=23.69 Aligned_cols=44 Identities=11% Similarity=0.231 Sum_probs=31.1
Q ss_pred cEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEe
Q 046476 102 FEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISN 160 (376)
Q Consensus 102 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~ 160 (376)
-.+++++|.|+.|. |...... + .....+.+|...+.|.|+...-
T Consensus 11 A~V~~~d~~~~~W~--p~~~g~~--------g-----vs~V~~~~d~~~~~yrI~~~~l 54 (115)
T 1egx_A 11 ATVMLYDDGNKRWL--PAGTGPQ--------A-----FSRVQIYHNPTANSFRVVGRKM 54 (115)
T ss_dssp EECBEECTTTSSCC--BSSCSCC--------C-----CEEEEEEEETTTTEEEEEEEES
T ss_pred EEEEEEcCCCCcee--ECCCCCC--------C-----ccEEEEEEeCCCCEEEEEEEEc
Confidence 35788899999975 4432111 0 2567888999899999988763
No 182
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=32.70 E-value=2.8e+02 Score=25.06 Aligned_cols=93 Identities=17% Similarity=0.030 Sum_probs=50.2
Q ss_pred CCEEEEEEcCCceeEEE---eCCCcccCccee-EecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecc
Q 046476 225 KPVLAVFDVKEEKFDIV---KLPDEVRKHHDL-IQAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFD 300 (376)
Q Consensus 225 ~~~il~fDl~~e~~~~i---~~P~~~~~~~~L-~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~ 300 (376)
+..|..+|+.+.+...+ .+|...... .+ +...|.+++.... ..++.||-+... ..+.+ +..+
T Consensus 259 D~tIklWd~~tgk~l~v~~~~~p~Gh~~~-~lsg~~sg~~lASgS~----DgTIkIWDl~tG--------k~l~t-L~gH 324 (356)
T 2w18_A 259 VFQLIVINPKTTLSVGVMLYCLPPGQAGR-FLEGDVKDHCAAAILT----SGTIAIWDLLLG--------QCTAL-LPPV 324 (356)
T ss_dssp CEEEEEEETTTTEEEEEEEECCCTTCCCC-EEEEEEETTEEEEEET----TSCEEEEETTTC--------SEEEE-ECCC
T ss_pred CcEEEEEECCCCEEEEEEEeeccCCCcce-eEccccCCCEEEEEcC----CCcEEEEECCCC--------cEEEE-ecCC
Confidence 44566677776654322 245432111 11 1223445555444 679999987642 13344 4432
Q ss_pred cccccCcEeEEEccCCcEEEEecccCCCcEEEEEeC
Q 046476 301 TIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDL 336 (376)
Q Consensus 301 ~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl 336 (376)
.- .....+++.++|..++.. +.++.|.+||+
T Consensus 325 ~~--~vvs~vafSPDG~~LaSG---S~D~TIklWd~ 355 (356)
T 2w18_A 325 SD--QHWSFVKWSGTDSHLLAG---QKDGNIFVYHY 355 (356)
T ss_dssp ----CCCCEEEECSSSSEEEEE---CTTSCEEEEEE
T ss_pred CC--CeEEEEEECCCCCEEEEE---ECCCcEEEecC
Confidence 21 011346788899988766 36888988885
No 183
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=31.95 E-value=2.4e+02 Score=24.08 Aligned_cols=114 Identities=9% Similarity=-0.011 Sum_probs=0.0
Q ss_pred CceEEEEE-eCCCCCCCEEEEEEcCCceeEEEeCCCcccCcceeEecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCc
Q 046476 211 NGFIHWII-TNPRKTKPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEV 289 (376)
Q Consensus 211 ~G~lywl~-~~~~~~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~ 289 (376)
+|.+||.. . .+.|..+|.+.+.-..+..+... ......-+|+|+++... .....|+.++.. ...
T Consensus 42 ~g~lyv~d~~-----~~~I~~~d~~g~~~~~~~~~~~p--~gia~~~dG~l~vad~~----~~~~~v~~~d~~----~g~ 106 (306)
T 2p4o_A 42 DGTIFVTNHE-----VGEIVSITPDGNQQIHATVEGKV--SGLAFTSNGDLVATGWN----ADSIPVVSLVKS----DGT 106 (306)
T ss_dssp TSCEEEEETT-----TTEEEEECTTCCEEEEEECSSEE--EEEEECTTSCEEEEEEC----TTSCEEEEEECT----TSC
T ss_pred CCCEEEEeCC-----CCeEEEECCCCceEEEEeCCCCc--eeEEEcCCCcEEEEecc----CCcceEEEEcCC----CCe
Q ss_pred eeEEEEEeecccccccCcEeEEEccCCcEEEEecccCC-CcEEEEEeCCCCcEEEEEECC
Q 046476 290 WIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSL-VSRVFIYDLKTQERRAIKIPP 348 (376)
Q Consensus 290 W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~-~~~v~~ydl~t~~~~~v~~~~ 348 (376)
...... ++.... . .-++.+.++.+++.. . .+.++.+|+.+++.+.....+
T Consensus 107 ~~~~~~-~~~~~~--~--~g~~~~~~~~~~v~d----~~~g~i~~~d~~~~~~~v~~~~~ 157 (306)
T 2p4o_A 107 VETLLT-LPDAIF--L--NGITPLSDTQYLTAD----SYRGAIWLIDVVQPSGSIWLEHP 157 (306)
T ss_dssp EEEEEE-CTTCSC--E--EEEEESSSSEEEEEE----TTTTEEEEEETTTTEEEEEEECG
T ss_pred EEEEEe-CCCccc--c--CcccccCCCcEEEEE----CCCCeEEEEeCCCCcEeEEEECC
No 184
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=31.61 E-value=2.8e+02 Score=24.79 Aligned_cols=51 Identities=12% Similarity=0.182 Sum_probs=29.3
Q ss_pred CCEEEEEEcCCceeE-EEeCCCcccCcceeE-ecCCeEEEEEecCCCCCCeEEEEEEcc
Q 046476 225 KPVLAVFDVKEEKFD-IVKLPDEVRKHHDLI-QAEEKLGVLDCDDFRSKNKIRVWILKD 281 (376)
Q Consensus 225 ~~~il~fDl~~e~~~-~i~~P~~~~~~~~L~-~~~g~L~~~~~~~~~~~~~~~IW~l~~ 281 (376)
++.|..+|+.+.+.. .+..... ....+. .-+|.+.+.... ...+.||-+..
T Consensus 213 D~~i~~wd~~~~~~~~~~~~h~~--~v~~~~~~~~g~~l~s~s~----D~~v~vwd~~~ 265 (410)
T 1vyh_C 213 DKTIKMWEVQTGYCVKTFTGHRE--WVRMVRPNQDGTLIASCSN----DQTVRVWVVAT 265 (410)
T ss_dssp TSEEEEEETTTCCEEEEEECCSS--CEEEEEECTTSSEEEEEET----TSCEEEEETTT
T ss_pred CCeEEEEECCCCcEEEEEeCCCc--cEEEEEECCCCCEEEEEcC----CCeEEEEECCC
Confidence 678999999886543 2332221 111122 225666555554 67899997653
No 185
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=31.23 E-value=4.8e+02 Score=27.35 Aligned_cols=197 Identities=11% Similarity=0.046 Sum_probs=97.3
Q ss_pred cccceEEEEEecCcEEEEEecCCcceec-CCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCC
Q 046476 89 LINGFICFYNIVGFEILMRNVVTQEIID-LPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSS 167 (376)
Q Consensus 89 s~nGLl~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~ 167 (376)
+.+|-.+.....++.+.|||..|++... +... . .....+.+.|.. .+- .....
T Consensus 624 s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h-~----------------~~v~~~~~s~~~-~~l--~s~~~------ 677 (1249)
T 3sfz_A 624 SQDGQRIASCGADKTLQVFKAETGEKLLDIKAH-E----------------DEVLCCAFSSDD-SYI--ATCSA------ 677 (1249)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEEECCC-S----------------SCEEEEEECTTS-SEE--EEEET------
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCEEEEeccC-C----------------CCEEEEEEecCC-CEE--EEEeC------
Confidence 3445444443366789999999987643 3311 1 133445555532 332 22211
Q ss_pred cccceecCCCCCeEEEEEcCCCCeeecCCCCCcceecCCceEE----CceEEEEEeCCCCCCCEEEEEEcCCceeEEE-e
Q 046476 168 SYAWMIDNHGTPECEIFTLGTTSWRKIDAPPSRIHFRRQGLCA----NGFIHWIITNPRKTKPVLAVFDVKEEKFDIV-K 242 (376)
Q Consensus 168 ~~~~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~----~G~lywl~~~~~~~~~~il~fDl~~e~~~~i-~ 242 (376)
...+.+++..++.-...-..... .-..+.+ ++.+...+. .++.|..+|+.+.+.... .
T Consensus 678 ----------d~~v~vwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~l~sg~----~d~~v~vwd~~~~~~~~~~~ 740 (1249)
T 3sfz_A 678 ----------DKKVKIWDSATGKLVHTYDEHSE---QVNCCHFTNKSNHLLLATGS----NDFFLKLWDLNQKECRNTMF 740 (1249)
T ss_dssp ----------TSEEEEEETTTCCEEEEEECCSS---CEEEEEECSSSSCCEEEEEE----TTSCEEEEETTSSSEEEEEC
T ss_pred ----------CCeEEEEECCCCceEEEEcCCCC---cEEEEEEecCCCceEEEEEe----CCCeEEEEECCCcchhheec
Confidence 35688888887643221111000 0011111 222222222 167799999988765432 2
Q ss_pred CCCcccCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccc-------ccc-CcEeEEEc
Q 046476 243 LPDEVRKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTI-------MFR-PPIPVSNS 313 (376)
Q Consensus 243 ~P~~~~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~-------~~~-~~~~v~~~ 313 (376)
.... .-..+... +|.+.+.... ...+.+|-+... +. .+... ...... ... ....+++.
T Consensus 741 ~h~~--~v~~~~~sp~~~~l~s~s~----dg~v~vwd~~~~----~~--~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~s 807 (1249)
T 3sfz_A 741 GHTN--SVNHCRFSPDDELLASCSA----DGTLRLWDVRSA----NE--RKSIN-VKRFFLSSEDPPEDVEVIVKCCSWS 807 (1249)
T ss_dssp CCSS--CEEEEEECSSTTEEEEEES----SSEEEEEEGGGT----EE--EEEEE-CCCCC--------CCCCCBCCCCBC
T ss_pred CCCC--CEEEEEEecCCCEEEEEEC----CCeEEEEeCCCC----cc--cceec-ccccccccCCccccccceEEEEEEC
Confidence 2111 11122222 5555455444 678999987653 11 11111 110000 000 11234556
Q ss_pred cCCcEEEEecccCCCcEEEEEeCCCCcEEEEE
Q 046476 314 NNGEILLTEYKSSLVSRVFIYDLKTQERRAIK 345 (376)
Q Consensus 314 ~~g~il~~~~~~~~~~~v~~ydl~t~~~~~v~ 345 (376)
.+|..++.. .++.+.+||+.+.......
T Consensus 808 ~dg~~l~~~----~~~~v~~~d~~~~~~~~~~ 835 (1249)
T 3sfz_A 808 ADGDKIIVA----AKNKVLLFDIHTSGLLAEI 835 (1249)
T ss_dssp TTSSEEEEE----ETTEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEE----cCCcEEEEEecCCCceeEE
Confidence 788877776 5788999999988765543
No 186
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=31.09 E-value=2.9e+02 Score=24.78 Aligned_cols=89 Identities=15% Similarity=0.101 Sum_probs=45.4
Q ss_pred CCeEEEEEcCCCCeeecCCCCCccee-cCCceEECceEEEEEeCCCCCCCEEEEEEcCCceeEE-EeCCCcccCcceeEe
Q 046476 178 TPECEIFTLGTTSWRKIDAPPSRIHF-RRQGLCANGFIHWIITNPRKTKPVLAVFDVKEEKFDI-VKLPDEVRKHHDLIQ 255 (376)
Q Consensus 178 ~~~~~vys~~t~~Wr~~~~~~~~~~~-~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~-i~~P~~~~~~~~L~~ 255 (376)
...+.+|+..++.-...-.. +. .-.++..+|.+...+. .++.|..+|+.+.+... +..... ...-+.
T Consensus 152 dg~i~iwd~~~~~~~~~~~~----h~~~v~~l~~~~~~l~sg~----~dg~i~vwd~~~~~~~~~~~~h~~---~v~~l~ 220 (435)
T 1p22_A 152 DNTIKIWDKNTLECKRILTG----HTGSVLCLQYDERVIITGS----SDSTVRVWDVNTGEMLNTLIHHCE---AVLHLR 220 (435)
T ss_dssp SSCEEEEESSSCCEEEEECC----CSSCEEEEECCSSEEEEEE----TTSCEEEEESSSCCEEEEECCCCS---CEEEEE
T ss_pred CCeEEEEeCCCCeEEEEEcC----CCCcEEEEEECCCEEEEEc----CCCeEEEEECCCCcEEEEEcCCCC---cEEEEE
Confidence 35677887776543222111 11 1123334666555554 16789999998865432 222221 112222
Q ss_pred cCCeEEEEEecCCCCCCeEEEEEEcc
Q 046476 256 AEEKLGVLDCDDFRSKNKIRVWILKD 281 (376)
Q Consensus 256 ~~g~L~~~~~~~~~~~~~~~IW~l~~ 281 (376)
..+.+.+.... ...+.||-++.
T Consensus 221 ~~~~~l~s~s~----dg~i~vwd~~~ 242 (435)
T 1p22_A 221 FNNGMMVTCSK----DRSIAVWDMAS 242 (435)
T ss_dssp CCTTEEEEEET----TSCEEEEECSS
T ss_pred EcCCEEEEeeC----CCcEEEEeCCC
Confidence 33444344433 67888997764
No 187
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=31.01 E-value=2.7e+02 Score=24.30 Aligned_cols=58 Identities=16% Similarity=0.094 Sum_probs=35.2
Q ss_pred CCeEEEEEEccCCCCCCCceeEEEEEeec---c---cccccCcEeEEEccCCcEEEEecccCCC---cEEEEEeCCCCcE
Q 046476 271 KNKIRVWILKDYGRGGGEVWIRRDYVFRF---D---TIMFRPPIPVSNSNNGEILLTEYKSSLV---SRVFIYDLKTQER 341 (376)
Q Consensus 271 ~~~~~IW~l~~~~~g~~~~W~~~~~ii~~---~---~~~~~~~~~v~~~~~g~il~~~~~~~~~---~~v~~ydl~t~~~ 341 (376)
...+.||-++.. ..... +.. + .. ....+++..++..++... .+ +.+.+||+++.+.
T Consensus 206 dg~i~i~d~~~~--------~~~~~-~~~~~~h~~~~~---~i~~i~~~~~~~~l~~~~---~d~~~g~i~i~d~~~~~~ 270 (397)
T 1sq9_A 206 NGTVQISELSTL--------RPLYN-FESQHSMINNSN---SIRSVKFSPQGSLLAIAH---DSNSFGCITLYETEFGER 270 (397)
T ss_dssp TSEEEEEETTTT--------EEEEE-EECCC---CCCC---CEEEEEECSSTTEEEEEE---EETTEEEEEEEETTTCCE
T ss_pred CCcEEEEECCCC--------ceeEE-EeccccccccCC---ccceEEECCCCCEEEEEe---cCCCCceEEEEECCCCcc
Confidence 678999977642 12223 332 2 11 224567777788776652 45 7899999988765
Q ss_pred EE
Q 046476 342 RA 343 (376)
Q Consensus 342 ~~ 343 (376)
..
T Consensus 271 ~~ 272 (397)
T 1sq9_A 271 IG 272 (397)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 188
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=30.91 E-value=2.3e+02 Score=23.53 Aligned_cols=109 Identities=8% Similarity=0.015 Sum_probs=55.5
Q ss_pred eEECceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcccCcceeEecCCeEEEEEecCCCCCCeEEEEEEccCCCCCC
Q 046476 208 LCANGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGG 287 (376)
Q Consensus 208 v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~ 287 (376)
+..+|.....+. .++.|..||.. +....+......-........++.+.++... ...+.+|-...
T Consensus 110 ~~~~~~~l~~~~----~d~~i~~~d~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----d~~i~i~d~~~------ 174 (313)
T 3odt_A 110 LSFQDGVVISGS----WDKTAKVWKEG-SLVYNLQAHNASVWDAKVVSFSENKFLTASA----DKTIKLWQNDK------ 174 (313)
T ss_dssp EEEETTEEEEEE----TTSEEEEEETT-EEEEEEECCSSCEEEEEEEETTTTEEEEEET----TSCEEEEETTE------
T ss_pred EEecCCEEEEEe----CCCCEEEEcCC-cEEEecccCCCceeEEEEccCCCCEEEEEEC----CCCEEEEecCc------
Confidence 334555444444 16789999933 3333333322211111222325655555544 67888995211
Q ss_pred CceeEEEEEeec-ccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEEE
Q 046476 288 EVWIRRDYVFRF-DTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERRA 343 (376)
Q Consensus 288 ~~W~~~~~ii~~-~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~~ 343 (376)
.... +.. .. .....+++..++.++... .++.+.+||+++++...
T Consensus 175 ----~~~~-~~~~~~---~~i~~~~~~~~~~~~~~~----~dg~i~i~d~~~~~~~~ 219 (313)
T 3odt_A 175 ----VIKT-FSGIHN---DVVRHLAVVDDGHFISCS----NDGLIKLVDMHTGDVLR 219 (313)
T ss_dssp ----EEEE-ECSSCS---SCEEEEEEEETTEEEEEE----TTSEEEEEETTTCCEEE
T ss_pred ----eEEE-EeccCc---ccEEEEEEcCCCeEEEcc----CCCeEEEEECCchhhhh
Confidence 1122 221 11 122445666677755555 78889999998776543
No 189
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=30.30 E-value=2.5e+02 Score=23.81 Aligned_cols=107 Identities=14% Similarity=0.081 Sum_probs=55.5
Q ss_pred CCEEEEEEcCCceeEEEeCCCcccCcceeEec-CCe-EEEEEecCC-CCCCeEEEEEEccCCCCCCCceeEEEEEeeccc
Q 046476 225 KPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQA-EEK-LGVLDCDDF-RSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDT 301 (376)
Q Consensus 225 ~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~~-~g~-L~~~~~~~~-~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~ 301 (376)
...|..+|+.+.++..+. .. .....+... +|+ |+++..... .....+.+|-++.. . ...... +-...
T Consensus 168 ~~~v~~~d~~~g~~~~~~-~~--~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~-----~-l~~~~~-~~~~~ 237 (305)
T 3dr2_A 168 HHSVYRLPPDGSPLQRMA-DL--DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG-----A-LHDRRH-FASVP 237 (305)
T ss_dssp CEEEEEECSSSCCCEEEE-EE--SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETT-----E-EEEEEE-EECCS
T ss_pred CCeEEEEcCCCCcEEEEe-cC--CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC-----C-ccCCeE-EEECC
Confidence 357999999888777664 11 111223333 565 666554210 00134444444321 1 222222 21111
Q ss_pred ccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEEEEEECC
Q 046476 302 IMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERRAIKIPP 348 (376)
Q Consensus 302 ~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~~v~~~~ 348 (376)
. ....-+++..+|.|++.. ...|..||++.+.+..+....
T Consensus 238 ~--~~pdgi~~d~~G~lwv~~-----~~gv~~~~~~g~~~~~~~~~~ 277 (305)
T 3dr2_A 238 D--GLPDGFCVDRGGWLWSSS-----GTGVCVFDSDGQLLGHIPTPG 277 (305)
T ss_dssp S--SCCCSEEECTTSCEEECC-----SSEEEEECTTSCEEEEEECSS
T ss_pred C--CCCCeEEECCCCCEEEec-----CCcEEEECCCCCEEEEEECCC
Confidence 1 111235667788876655 456999999988888876543
No 190
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=29.75 E-value=2.8e+02 Score=24.19 Aligned_cols=65 Identities=17% Similarity=0.187 Sum_probs=40.8
Q ss_pred CCeEEEEEecCCCCCCe-EEEEEEccCCCCCCCceeEEEEEee-c-ccccccCcEeEEEccCCcEEEEecccCCCcEEEE
Q 046476 257 EEKLGVLDCDDFRSKNK-IRVWILKDYGRGGGEVWIRRDYVFR-F-DTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFI 333 (376)
Q Consensus 257 ~g~L~~~~~~~~~~~~~-~~IW~l~~~~~g~~~~W~~~~~ii~-~-~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ 333 (376)
+|++.+.... ..+ +.||-++.. ..... +. . +.- ....+++.++|..++.. +.++.+.+
T Consensus 206 ~g~~l~s~s~----d~~~v~iwd~~~~--------~~~~~-~~~g~h~~---~v~~~~~s~~~~~l~s~---s~d~~v~i 266 (355)
T 3vu4_A 206 KSDMVATCSQ----DGTIIRVFKTEDG--------VLVRE-FRRGLDRA---DVVDMKWSTDGSKLAVV---SDKWTLHV 266 (355)
T ss_dssp TSSEEEEEET----TCSEEEEEETTTC--------CEEEE-EECTTCCS---CEEEEEECTTSCEEEEE---ETTCEEEE
T ss_pred CCCEEEEEeC----CCCEEEEEECCCC--------cEEEE-EEcCCCCC---cEEEEEECCCCCEEEEE---ECCCEEEE
Confidence 6666555444 566 999976532 23444 43 1 221 23556778888877665 26789999
Q ss_pred EeCCCCc
Q 046476 334 YDLKTQE 340 (376)
Q Consensus 334 ydl~t~~ 340 (376)
||+++..
T Consensus 267 w~~~~~~ 273 (355)
T 3vu4_A 267 FEIFNDQ 273 (355)
T ss_dssp EESSCCS
T ss_pred EEccCCC
Confidence 9998654
No 191
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=29.60 E-value=3.1e+02 Score=24.54 Aligned_cols=116 Identities=11% Similarity=0.082 Sum_probs=61.8
Q ss_pred CceEEEEEeCCCCCCCEEEEEEcCCceeEE---EeCCCc------c-cCcce-eE--ecCCeEEEEEecCCC---CCCeE
Q 046476 211 NGFIHWIITNPRKTKPVLAVFDVKEEKFDI---VKLPDE------V-RKHHD-LI--QAEEKLGVLDCDDFR---SKNKI 274 (376)
Q Consensus 211 ~G~lywl~~~~~~~~~~il~fDl~~e~~~~---i~~P~~------~-~~~~~-L~--~~~g~L~~~~~~~~~---~~~~~ 274 (376)
+|.+||.+. .+.+.+.|+.+..-.. +++... . ..... +. .-+++|++....... ....=
T Consensus 224 ~~~~~~~~~-----~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~ 298 (373)
T 2mad_H 224 SGRIVWPVY-----SGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAK 298 (373)
T ss_pred CCEEEEEcC-----CceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCC
Confidence 456666665 5678888987653322 221110 0 01111 22 223566665542100 01223
Q ss_pred EEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCc-EEEEecccCCCcEEEEEeCCCCcEEEE
Q 046476 275 RVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGE-ILLTEYKSSLVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 275 ~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~-il~~~~~~~~~~~v~~ydl~t~~~~~v 344 (376)
.||+++- .....+.+ |+... ....+++..+|+ .++... ..++.|.++|.+|.+....
T Consensus 299 ~V~VID~------~t~~vv~~-i~~g~----~p~~i~~s~Dg~~~l~v~~--~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 299 EVTSVTG------LVGQTSSQ-ISLGH----DVDAISVAQDGGPDLYALS--AGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred eEEEEEC------CCCEEEEE-EECCC----CcCeEEECCCCCeEEEEEc--CCCCeEEEEECCCCCEEee
Confidence 6888774 24555566 43211 124567788888 777652 1368999999999887654
No 192
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=29.11 E-value=3.2e+02 Score=24.58 Aligned_cols=103 Identities=12% Similarity=0.088 Sum_probs=55.1
Q ss_pred CCEEEEEEcCCc--eeEEEeCCCcccCcceeEec-CC-eEEEEEecCCCCCCeEEEEEEccCCCCCCC--------ceeE
Q 046476 225 KPVLAVFDVKEE--KFDIVKLPDEVRKHHDLIQA-EE-KLGVLDCDDFRSKNKIRVWILKDYGRGGGE--------VWIR 292 (376)
Q Consensus 225 ~~~il~fDl~~e--~~~~i~~P~~~~~~~~L~~~-~g-~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~--------~W~~ 292 (376)
.+.|..||+.+. ....+..... .-..+.-. +| .+.+.... ...+.||-+...+ ... .-..
T Consensus 299 dg~v~vwd~~~~~~~~~~~~~h~~--~v~~i~~sp~~~~~l~s~~~----d~~i~iwd~~~~~--~~~~~~~~~~~~~~~ 370 (430)
T 2xyi_A 299 DKTVALWDLRNLKLKLHSFESHKD--EIFQVQWSPHNETILASSGT----DRRLHVWDLSKIG--EEQSTEDAEDGPPEL 370 (430)
T ss_dssp TSEEEEEETTCTTSCSEEEECCSS--CEEEEEECSSCTTEEEEEET----TSCCEEEEGGGTT--CCCCHHHHHHCCTTE
T ss_pred CCeEEEEeCCCCCCCeEEeecCCC--CEEEEEECCCCCCEEEEEeC----CCcEEEEeCCCCc--cccCccccccCCcce
Confidence 678999999863 2333332211 11222222 34 45455444 6789999987642 110 0123
Q ss_pred EEEEeecccccccCcEeEEEccCCc-EEEEecccCCCcEEEEEeCCCCcEE
Q 046476 293 RDYVFRFDTIMFRPPIPVSNSNNGE-ILLTEYKSSLVSRVFIYDLKTQERR 342 (376)
Q Consensus 293 ~~~ii~~~~~~~~~~~~v~~~~~g~-il~~~~~~~~~~~v~~ydl~t~~~~ 342 (376)
+.. +..+.- ....+++..++. +++.. +.++.|.+|++.++.+.
T Consensus 371 ~~~-~~~h~~---~v~~~~~~p~~~~~l~s~---s~dg~i~iw~~~~~~~~ 414 (430)
T 2xyi_A 371 LFI-HGGHTA---KISDFSWNPNEPWIICSV---SEDNIMQVWQMAENVYN 414 (430)
T ss_dssp EEE-CCCCSS---CEEEEEECSSSTTEEEEE---ETTSEEEEEEECHHHHC
T ss_pred EEE-cCCCCC---CceEEEECCCCCCEEEEE---ECCCCEEEeEccccccc
Confidence 333 222221 224566677777 65554 26889999999876554
No 193
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=28.33 E-value=4.2e+02 Score=25.71 Aligned_cols=123 Identities=13% Similarity=0.048 Sum_probs=65.3
Q ss_pred CCceEECceEEEEEeCCCCCCCEEEEEEc-CC--ceeEEEe-CCCcc-------cCcceeEe--cCCe----EEEEEecC
Q 046476 205 RQGLCANGFIHWIITNPRKTKPVLAVFDV-KE--EKFDIVK-LPDEV-------RKHHDLIQ--AEEK----LGVLDCDD 267 (376)
Q Consensus 205 ~~~v~~~G~lywl~~~~~~~~~~il~fDl-~~--e~~~~i~-~P~~~-------~~~~~L~~--~~g~----L~~~~~~~ 267 (376)
..++..+|.+|.... ..+.+.++|. .+ +.|+.-. .+... .....+.. .+|+ |++...+
T Consensus 56 ~tP~v~~g~vyv~~~----~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~d- 130 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTS----FPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLD- 130 (599)
T ss_dssp SCCEEETTEEEEECS----TTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTT-
T ss_pred eccEEECCEEEEEeC----CCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCC-
Confidence 567888999998753 0357999999 55 4565421 11110 01122444 5666 7665432
Q ss_pred CCCCCeEEEEEEccCCCCCCCceeEEEEEeeccccccc-CcEeEEEccCCcEEEEecc--cCCCcEEEEEeCCCCcEEEE
Q 046476 268 FRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFR-PPIPVSNSNNGEILLTEYK--SSLVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 268 ~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~-~~~~v~~~~~g~il~~~~~--~~~~~~v~~ydl~t~~~~~v 344 (376)
. .|..|+-.. .+..|... ++....... ...|+.. ++.|++.... ...++.|+.||.+|.+..+-
T Consensus 131 ----g--~l~AlDa~T--G~~~W~~~---~~~~~~~~~~~ssP~v~--~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~ 197 (599)
T 1w6s_A 131 ----G--NVAALNAET--GETVWKVE---NSDIKVGSTLTIAPYVV--KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWR 197 (599)
T ss_dssp ----S--EEEEEETTT--CCEEEEEE---CCCGGGTCBCCSCCEEE--TTEEEECCBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred ----C--EEEEEECCC--CCEEEeec---CCCCCccceeecCCEEE--CCEEEEEecccccCCCCeEEEEECCCCcEEEE
Confidence 2 456666321 36678764 222111000 1134432 4666554310 01257999999999987754
Q ss_pred E
Q 046476 345 K 345 (376)
Q Consensus 345 ~ 345 (376)
.
T Consensus 198 ~ 198 (599)
T 1w6s_A 198 A 198 (599)
T ss_dssp E
T ss_pred E
Confidence 3
No 194
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=28.32 E-value=3.3e+02 Score=24.48 Aligned_cols=94 Identities=16% Similarity=0.201 Sum_probs=48.4
Q ss_pred CCEEEEEEcCCce----eEEEeCCCcccCcceeEec-CCe-EEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEee
Q 046476 225 KPVLAVFDVKEEK----FDIVKLPDEVRKHHDLIQA-EEK-LGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFR 298 (376)
Q Consensus 225 ~~~il~fDl~~e~----~~~i~~P~~~~~~~~L~~~-~g~-L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~ 298 (376)
.+.|..||+.+.. ...+..... ....+.-. +|. +.++... ...+.||-+...+ . .+.. +.
T Consensus 253 dg~i~i~d~~~~~~~~~~~~~~~~~~--~v~~i~~~p~~~~~l~tg~~----dg~v~vwd~~~~~---~----~~~~-~~ 318 (430)
T 2xyi_A 253 DQKLMIWDTRNNNTSKPSHTVDAHTA--EVNCLSFNPYSEFILATGSA----DKTVALWDLRNLK---L----KLHS-FE 318 (430)
T ss_dssp TSEEEEEETTCSCSSSCSEEEECCSS--CEEEEEECSSCTTEEEEEET----TSEEEEEETTCTT---S----CSEE-EE
T ss_pred CCeEEEEECCCCCCCcceeEeecCCC--CeEEEEeCCCCCCEEEEEeC----CCeEEEEeCCCCC---C----CeEE-ee
Confidence 7889999998752 223322211 11122222 343 5455444 6789999887531 1 1223 23
Q ss_pred cccccccCcEeEEEccCCc-EEEEecccCCCcEEEEEeCCC
Q 046476 299 FDTIMFRPPIPVSNSNNGE-ILLTEYKSSLVSRVFIYDLKT 338 (376)
Q Consensus 299 ~~~~~~~~~~~v~~~~~g~-il~~~~~~~~~~~v~~ydl~t 338 (376)
.+.. ....+.+..++. +++... .++.|.+||+.+
T Consensus 319 ~h~~---~v~~i~~sp~~~~~l~s~~---~d~~i~iwd~~~ 353 (430)
T 2xyi_A 319 SHKD---EIFQVQWSPHNETILASSG---TDRRLHVWDLSK 353 (430)
T ss_dssp CCSS---CEEEEEECSSCTTEEEEEE---TTSCCEEEEGGG
T ss_pred cCCC---CEEEEEECCCCCCEEEEEe---CCCcEEEEeCCC
Confidence 2221 224456666664 444431 567788888876
No 195
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=28.05 E-value=3.3e+02 Score=24.47 Aligned_cols=27 Identities=4% Similarity=-0.027 Sum_probs=18.0
Q ss_pred cccceEEEEEecCcEEEEEecCCcceec
Q 046476 89 LINGFICFYNIVGFEILMRNVVTQEIID 116 (376)
Q Consensus 89 s~nGLl~~~~~~~~~~~V~NP~T~~~~~ 116 (376)
+.+|+++... .++.+.|||..+++...
T Consensus 171 ~~~~~l~s~s-~dg~i~vwd~~~~~~~~ 197 (464)
T 3v7d_B 171 AHGGILVSGS-TDRTVRVWDIKKGCCTH 197 (464)
T ss_dssp CSTTEEEEEE-TTSCEEEEETTTTEEEE
T ss_pred cCCCEEEEEe-CCCCEEEEECCCCcEEE
Confidence 3455444433 67789999999887654
No 196
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=27.39 E-value=3.1e+02 Score=23.96 Aligned_cols=103 Identities=10% Similarity=0.119 Sum_probs=53.1
Q ss_pred CCEEEEEEcCCceeE-EEeCCCcc----cCcceeEec-CC-eEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEe
Q 046476 225 KPVLAVFDVKEEKFD-IVKLPDEV----RKHHDLIQA-EE-KLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVF 297 (376)
Q Consensus 225 ~~~il~fDl~~e~~~-~i~~P~~~----~~~~~L~~~-~g-~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii 297 (376)
++.|..||+.+.+.. .+..+... .....+.-. +| .+.++... +.....+.||-++.. .... .. +
T Consensus 187 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d~~~~~i~~~d~~~~---~~~~----~~-~ 257 (416)
T 2pm9_A 187 SNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATG-SDNDPSILIWDLRNA---NTPL----QT-L 257 (416)
T ss_dssp SSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEEC-CSSSCCCCEEETTST---TSCS----BC-C
T ss_pred CCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEEC-CCCCceEEEEeCCCC---CCCc----EE-e
Confidence 677999999986653 33443210 112222222 33 34444433 111238999987653 1111 11 2
Q ss_pred e-cccccccCcEeEEEcc-CCcEEEEecccCCCcEEEEEeCCCCcEE
Q 046476 298 R-FDTIMFRPPIPVSNSN-NGEILLTEYKSSLVSRVFIYDLKTQERR 342 (376)
Q Consensus 298 ~-~~~~~~~~~~~v~~~~-~g~il~~~~~~~~~~~v~~ydl~t~~~~ 342 (376)
. .+.. ....+++.. ++.+++... .++.+.+||+++++..
T Consensus 258 ~~~~~~---~v~~~~~s~~~~~~l~s~~---~dg~v~~wd~~~~~~~ 298 (416)
T 2pm9_A 258 NQGHQK---GILSLDWCHQDEHLLLSSG---RDNTVLLWNPESAEQL 298 (416)
T ss_dssp CSCCSS---CEEEEEECSSCSSCEEEEE---SSSEEEEECSSSCCEE
T ss_pred ecCccC---ceeEEEeCCCCCCeEEEEe---CCCCEEEeeCCCCccc
Confidence 2 1111 224456655 666665542 6788999999887654
No 197
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=27.00 E-value=3.7e+02 Score=24.65 Aligned_cols=116 Identities=16% Similarity=0.116 Sum_probs=60.1
Q ss_pred cCCceEEC-----ceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcccCcceeE-ecCCeEEEEEecCCCCCCeEEEE
Q 046476 204 RRQGLCAN-----GFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEVRKHHDLI-QAEEKLGVLDCDDFRSKNKIRVW 277 (376)
Q Consensus 204 ~~~~v~~~-----G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~-~~~g~L~~~~~~~~~~~~~~~IW 277 (376)
...++.++ |.|||.-. ...|..+|+.+.+...+..+.. ....+. .-+|.|+++.... .....-.++
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~-----~~~I~~id~~~g~v~~~~~~~~--~P~giavd~dG~lyVad~~~-~~~~~gv~~ 211 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQ-----RDAFRHVDFVNQYVDIKTTNIG--QCADVNFTLNGDMVVVDDQS-SDTNTGIYL 211 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECB-----TSCEEEEETTTTEEEEECCCCS--CEEEEEECTTCCEEEEECCS-CTTSEEEEE
T ss_pred CCceEEEccccCCCEEEEEeC-----CCCEEEEECCCCEEEEeecCCC--CccEEEECCCCCEEEEcCCC-CcccceEEE
Confidence 45567776 89998765 3789999998888877643221 122333 3377777776531 011222333
Q ss_pred EEccCCCCCCCceeEEEEEeecccccccCcEeEEEcc-CCcEEEEecccCCCcEEEEEeCCCCcE
Q 046476 278 ILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSN-NGEILLTEYKSSLVSRVFIYDLKTQER 341 (376)
Q Consensus 278 ~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~-~g~il~~~~~~~~~~~v~~ydl~t~~~ 341 (376)
...+. .|..... +.. . ....-+++.. +|.|++... ..+.|+.+|+++++.
T Consensus 212 ~~~~~------~~~~~~~-~~~--~--~~P~giavd~~~G~lyv~d~---~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 212 FTRAS------GFTERLS-LCN--A--RGAKTCAVHPQNGKIYYTRY---HHAMISSYDPATGTL 262 (433)
T ss_dssp ECGGG------TTCCEEE-EEE--C--SSBCCCEECTTTCCEEECBT---TCSEEEEECTTTCCE
T ss_pred EECCC------Ceecccc-ccc--c--CCCCEEEEeCCCCeEEEEEC---CCCEEEEEECCCCeE
Confidence 33321 1221122 221 1 1112245555 566666542 345677777765555
No 198
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=26.82 E-value=3.3e+02 Score=24.00 Aligned_cols=141 Identities=11% Similarity=0.041 Sum_probs=71.8
Q ss_pred cceEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCccc
Q 046476 91 NGFICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSYA 170 (376)
Q Consensus 91 nGLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~ 170 (376)
.+.+++. ....+...++.+.+...+-.. . ....++.+|+..+. +.....
T Consensus 44 ~~~ll~~--~~~~I~~i~~~g~~~~~~~~~-~----------------~~~~~l~~d~~~~~--ly~~D~---------- 92 (349)
T 3v64_C 44 EPVLLFA--NRIDIRQVLPHRSEYTLLLNN-L----------------ENAIALDFHHRREL--VFWSDV---------- 92 (349)
T ss_dssp CCEEEEE--CBSCEEEECTTSCCEEEEECS-C----------------SCEEEEEEETTTTE--EEEEET----------
T ss_pred CceeEee--cccceEEEeCCCCeeEEeecC-C----------------CceEEEEEeccccE--EEEEec----------
Confidence 5666666 445566667766554432211 0 14567778876543 222211
Q ss_pred ceecCCCCCeEEEEEcCCCCeeecCCCCCcceecCCceEE---CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcc
Q 046476 171 WMIDNHGTPECEIFTLGTTSWRKIDAPPSRIHFRRQGLCA---NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEV 247 (376)
Q Consensus 171 ~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~ 247 (376)
....+..++..+..-+.+.... .....++.+ +|.+||.... ...|..+|++...-..+.. ...
T Consensus 93 ------~~~~I~r~~~~g~~~~~~~~~~---~~~p~glavd~~~g~ly~~d~~----~~~I~~~~~dG~~~~~l~~-~~l 158 (349)
T 3v64_C 93 ------TLDRILRANLNGSNVEEVVSTG---LESPGGLAVDWVHDKLYWTDSG----TSRIEVANLDGAHRKVLLW-QSL 158 (349)
T ss_dssp ------TTTEEEEEETTSCSCEEEECSS---CSCCCEEEEETTTTEEEEEETT----TTEEEEEETTSCSCEEEEC-TTC
T ss_pred ------cCCceEEEecCCCCceEEEeCC---CCCccEEEEecCCCeEEEEcCC----CCeEEEEcCCCCceEEEEe-CCC
Confidence 1345666666665444332110 002234444 5899998651 5789999998654433321 111
Q ss_pred cCcceeEe--cCCeEEEEEecCCCCCCeEEEEEEcc
Q 046476 248 RKHHDLIQ--AEEKLGVLDCDDFRSKNKIRVWILKD 281 (376)
Q Consensus 248 ~~~~~L~~--~~g~L~~~~~~~~~~~~~~~IW~l~~ 281 (376)
.....++. .+|.|++.... . .-.|++.+-
T Consensus 159 ~~P~~iavdp~~g~ly~td~~----~-~~~I~r~~~ 189 (349)
T 3v64_C 159 EKPRAIALHPMEGTIYWTDWG----N-TPRIEASSM 189 (349)
T ss_dssp SCEEEEEEETTTTEEEEEECS----S-SCEEEEEET
T ss_pred CCcceEEEecCcCeEEEeccC----C-CCEEEEEeC
Confidence 11223333 37788777643 2 234565543
No 199
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=26.19 E-value=5.2e+02 Score=26.10 Aligned_cols=145 Identities=12% Similarity=0.049 Sum_probs=0.0
Q ss_pred cccccceEEEEEecCcEEEEEecCCcceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEEecCCCCC
Q 046476 87 TQLINGFICFYNIVGFEILMRNVVTQEIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNISNKHTTNS 166 (376)
Q Consensus 87 ~~s~nGLl~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~ 166 (376)
+...+|.|-+.......+.+.++-.+..+.|-......| .++.+|+..+...+.-...
T Consensus 478 vD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P----------------~gIaVDp~~g~LYwtD~g~------ 535 (791)
T 3m0c_C 478 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKP----------------RAIVVDPVHGFMYWTDWGT------ 535 (791)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCE----------------EEEEEETTTTEEEEEECSS------
T ss_pred eeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCc----------------ceEEEecCCCCEEEecCCC------
Q ss_pred CcccceecCCCCCeEEEEEcCCCCeeecCCCCCccee-cCCceEEC---ceEEEEEeCCCCCCCEEEEEEcCCceeEEEe
Q 046476 167 SSYAWMIDNHGTPECEIFTLGTTSWRKIDAPPSRIHF-RRQGLCAN---GFIHWIITNPRKTKPVLAVFDVKEEKFDIVK 242 (376)
Q Consensus 167 ~~~~~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~-~~~~v~~~---G~lywl~~~~~~~~~~il~fDl~~e~~~~i~ 242 (376)
...++++++....=+.+... .. ...++.++ |.|||.-.. ...|.++|+....-..+.
T Consensus 536 -----------~~~I~~~~~dG~~~~~lv~~----~l~~P~GLavD~~~~~LYwaD~~----~~~I~~~d~dG~~~~~v~ 596 (791)
T 3m0c_C 536 -----------PAKIKKGGLNGVDIYSLVTE----NIQWPNGITLDLLSGRLYWVDSK----LHSISSIDVNGGNRKTIL 596 (791)
T ss_dssp -----------SCEEEEEETTSCCEEEEECS----SCSCEEEEEEETTTTEEEEEETT----TTEEEEEETTSCSCEEEE
T ss_pred -----------CCeEEEEecCCCceEEEEeC----CCCCceEEEEecCCCeEEEEeCC----CCcEEEEecCCCceEEEe
Q ss_pred CCCcc-cCcceeEecCCeEEEEEecCCCCCCeEEE
Q 046476 243 LPDEV-RKHHDLIQAEEKLGVLDCDDFRSKNKIRV 276 (376)
Q Consensus 243 ~P~~~-~~~~~L~~~~g~L~~~~~~~~~~~~~~~I 276 (376)
.-... .....|...++.|+++... ...+..
T Consensus 597 ~~~~~l~~P~glav~~~~lYwtD~~----~~~I~~ 627 (791)
T 3m0c_C 597 EDEKRLAHPFSLAVFEDKVFWTDII----NEAIFS 627 (791)
T ss_dssp ECTTTTSSEEEEEEETTEEEEEETT----TTEEEE
T ss_pred cCCCccCCCCEEEEeCCEEEEEECC----CCEEEE
No 200
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=26.00 E-value=31 Score=20.98 Aligned_cols=18 Identities=17% Similarity=0.290 Sum_probs=13.3
Q ss_pred CCCCChHHHHHHHccCCc
Q 046476 6 RDTVPHDVAMDVLKILPE 23 (376)
Q Consensus 6 ~~~LP~dll~~IL~rLp~ 23 (376)
...||.||-+|||+--..
T Consensus 21 F~~LP~dIQ~Ells~~~~ 38 (48)
T 2kwv_A 21 FKQLPADIQEEILSGKSR 38 (48)
T ss_dssp TTTSCHHHHHHHTTCCCS
T ss_pred HHHCcHHHHHHHHhcchH
Confidence 357888999988876543
No 201
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=25.96 E-value=3e+02 Score=23.27 Aligned_cols=108 Identities=12% Similarity=0.063 Sum_probs=0.0
Q ss_pred CceEEEEEeCCCCCCCEEEEEEcCCceeE-EEeCCCcccCcceeEecCCe-EEEEEecCCCCCCeEEEEEEccCCCCCCC
Q 046476 211 NGFIHWIITNPRKTKPVLAVFDVKEEKFD-IVKLPDEVRKHHDLIQAEEK-LGVLDCDDFRSKNKIRVWILKDYGRGGGE 288 (376)
Q Consensus 211 ~G~lywl~~~~~~~~~~il~fDl~~e~~~-~i~~P~~~~~~~~L~~~~g~-L~~~~~~~~~~~~~~~IW~l~~~~~g~~~ 288 (376)
++.+|..+.. .+.|..+|+.+.+.. .++.+...........-+|+ +++.... ...+.+|-++..
T Consensus 10 ~~~~~v~~~~----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~----~~~i~~~d~~t~------ 75 (349)
T 1jmx_B 10 GHEYMIVTNY----PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH----YGDIYGIDLDTC------ 75 (349)
T ss_dssp TCEEEEEEET----TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT----TTEEEEEETTTT------
T ss_pred CCEEEEEeCC----CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC----CCcEEEEeCCCC------
Q ss_pred ceeEEEEEeecc----cccccCcEeEEEccCCcEEEEecccCC-------------CcEEEEEeCCCCc
Q 046476 289 VWIRRDYVFRFD----TIMFRPPIPVSNSNNGEILLTEYKSSL-------------VSRVFIYDLKTQE 340 (376)
Q Consensus 289 ~W~~~~~ii~~~----~~~~~~~~~v~~~~~g~il~~~~~~~~-------------~~~v~~ydl~t~~ 340 (376)
.-..... ++.. .. ....+++..+|+.++.. . ...+.+||+++++
T Consensus 76 ~~~~~~~-~~~~~~~~~~---~~~~~~~spdg~~l~~~----~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 76 KNTFHAN-LSSVPGEVGR---SMYSFAISPDGKEVYAT----VNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp EEEEEEE-SCCSTTEEEE---CSSCEEECTTSSEEEEE----EEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred cEEEEEE-cccccccccc---cccceEECCCCCEEEEE----cccccccccccccCCCeEEEEECCCcc
No 202
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=25.81 E-value=4.9e+02 Score=25.66 Aligned_cols=106 Identities=10% Similarity=0.156 Sum_probs=55.0
Q ss_pred CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcc--cCcceeEecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCC
Q 046476 211 NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEV--RKHHDLIQAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGE 288 (376)
Q Consensus 211 ~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~--~~~~~L~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~ 288 (376)
+|. -|++. ...+..||..+++|.. |... .....+...+|.|.+... . .|..++.. ..
T Consensus 73 ~g~-lWigT-----~~Gl~~yd~~~~~f~~---~~~~~~~~i~~i~~~~g~lWigt~------~--Gl~~~~~~----~~ 131 (758)
T 3ott_A 73 NTY-LYMGT-----DNGILVYNYRADRYEQ---PETDFPTDVRTMALQGDTLWLGAL------N--GLYTYQLQ----SR 131 (758)
T ss_dssp TTE-EEEEE-----TTEEEEEETTTTEECC---CSCCCCSCEEEEEEETTEEEEEET------T--EEEEEETT----TC
T ss_pred CCc-EEEEe-----CCCeEEEeCCCCEEEC---cccCCCceEEEEEecCCcEEEEcC------C--cceeEeCC----CC
Confidence 354 46666 5678999999998864 2111 111123334666666542 1 34444432 22
Q ss_pred ceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEEEE
Q 046476 289 VWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 289 ~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~~v 344 (376)
....... ......-.....+....+|.|++.+ ...++.||+++++++.+
T Consensus 132 ~~~~~~~--~~~~l~~~~i~~i~~d~~g~lWigt-----~~Gl~~~~~~~~~~~~~ 180 (758)
T 3ott_A 132 KLTSFDT--RRNGLPNNTIYSIIRTKDNQIYVGT-----YNGLCRYIPSNGKFEGI 180 (758)
T ss_dssp CEEEECH--HHHCCSCSCEEEEEECTTCCEEEEE-----TTEEEEEETTTTEEEEE
T ss_pred eEEEecc--CCCCcCCCeEEEEEEcCCCCEEEEe-----CCCHhhCccCCCceEEe
Confidence 2322100 0011100111334445578888876 35789999988877654
No 203
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=25.71 E-value=3.6e+02 Score=24.12 Aligned_cols=111 Identities=12% Similarity=0.130 Sum_probs=59.0
Q ss_pred CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcccCcceeEe--cCCeEEEEEecCCCCCCeEEEEEEccCCCCCCC
Q 046476 211 NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQ--AEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGE 288 (376)
Q Consensus 211 ~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~--~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~ 288 (376)
+|.+||... +....|..+|+....-..+-. ........|+. .+|.|+++... .. .|++.+-.| ..
T Consensus 213 ~g~ly~td~---~~~~~I~r~~~dG~~~~~~~~-~~~~~PnGlavd~~~~~lY~aD~~----~~--~I~~~d~dG---~~ 279 (386)
T 3v65_B 213 EGTIYWTDW---GNTPRIEASSMDGSGRRIIAD-THLFWPNGLTIDYAGRRMYWVDAK----HH--VIERANLDG---SH 279 (386)
T ss_dssp TTEEEEEEC---SSSCEEEEEETTSCSCEEEEC-SSCSCEEEEEEEGGGTEEEEEETT----TT--EEEEECTTS---CS
T ss_pred CCeEEEecc---CCCCEEEEEeCCCCCcEEEEE-CCCCCeeeEEEeCCCCEEEEEECC----CC--EEEEEeCCC---Ce
Confidence 589999865 213789999998654433321 11111122433 47889888754 33 566665332 11
Q ss_pred ceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeC-CCCcEEEEE
Q 046476 289 VWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDL-KTQERRAIK 345 (376)
Q Consensus 289 ~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl-~t~~~~~v~ 345 (376)
. ..++.. .. ....-+++ .++.+++... ....|..+|. ..+..+.+.
T Consensus 280 ~----~~~~~~-~~--~~P~giav-~~~~ly~td~---~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 280 R----KAVISQ-GL--PHPFAITV-FEDSLYWTDW---HTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp C----EEEECS-SC--SSEEEEEE-ETTEEEEEET---TTTEEEEEETTTCCSCEEEE
T ss_pred e----EEEEEC-CC--CCceEEEE-ECCEEEEeeC---CCCeEEEEECCCCcceEEEc
Confidence 1 121221 11 21122344 3566777652 5778999995 444555554
No 204
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=25.68 E-value=3e+02 Score=23.13 Aligned_cols=106 Identities=8% Similarity=0.099 Sum_probs=54.5
Q ss_pred CCEEEEEEcCCce--eEEE-eCCCcccCcceeEec-C---CeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEe
Q 046476 225 KPVLAVFDVKEEK--FDIV-KLPDEVRKHHDLIQA-E---EKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVF 297 (376)
Q Consensus 225 ~~~il~fDl~~e~--~~~i-~~P~~~~~~~~L~~~-~---g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii 297 (376)
++.|..||+.+.+ +... .+......-..+.-. + +.+.+.... ...+.||-++.. ...|.+.. +
T Consensus 179 D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~----D~~v~iWd~~~~----~~~~~~~~--~ 248 (297)
T 2pm7_B 179 DNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQ----DRTCIIWTQDNE----QGPWKKTL--L 248 (297)
T ss_dssp TSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET----TSCEEEEEESST----TSCCEEEE--S
T ss_pred CCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEEC----CCcEEEEEeCCC----CCccceee--e
Confidence 5678888887643 3322 222211111122211 2 344444433 688999988753 34565431 2
Q ss_pred ecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCC-CcEEEE
Q 046476 298 RFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKT-QERRAI 344 (376)
Q Consensus 298 ~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t-~~~~~v 344 (376)
..... -.....+++..+|..|.... .++.|.+|+... ++|+.+
T Consensus 249 ~~~~~-~~~v~~~~~s~~g~~las~~---~D~~v~lw~~~~~g~w~~~ 292 (297)
T 2pm7_B 249 KEEKF-PDVLWRASWSLSGNVLALSG---GDNKVTLWKENLEGKWEPA 292 (297)
T ss_dssp SSSCC-SSCEEEEEECSSSCCEEEEE---TTSCEEEEEECTTSCEEEC
T ss_pred ecccC-CCcEEEEEECCCCCEEEEEc---CCCcEEEEEECCCCcEEec
Confidence 11111 01224567777887766541 677889998763 455543
No 205
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=25.23 E-value=1.8e+02 Score=21.71 Aligned_cols=41 Identities=10% Similarity=0.169 Sum_probs=29.0
Q ss_pred CcEEEEEecCCc-ceecCCCCCcccCCCCCCCCCCccceeeEEEEEEeCCCCCeEEEEEE
Q 046476 101 GFEILMRNVVTQ-EIIDLPKSTFVVSDDDEDFSGPMISYFREYFLGFDPSSRDYKVLNIS 159 (376)
Q Consensus 101 ~~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~ykVv~~~ 159 (376)
.-.++..+|.|+ .|+..-.. .....+-+|+..+.|+|+.+.
T Consensus 10 rA~V~~~D~~tk~~W~p~g~~------------------~~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 10 RAHVFQIDPNTKKNWVPTSKH------------------AVTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEEEECTTTSCSEEESCSS------------------CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEEcCCCCCceEeCCCC------------------ceEEEEEEcCCCCEEEEEEcc
Confidence 346888999996 99643321 144567778888889999865
No 206
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=25.08 E-value=2.8e+02 Score=24.15 Aligned_cols=61 Identities=20% Similarity=0.291 Sum_probs=34.8
Q ss_pred CCceEE--CceEEEEEeCC-CCCCCEEEEEEcCCce-eEEEeCCCcc----cCcceeEec--CCeEEEEEe
Q 046476 205 RQGLCA--NGFIHWIITNP-RKTKPVLAVFDVKEEK-FDIVKLPDEV----RKHHDLIQA--EEKLGVLDC 265 (376)
Q Consensus 205 ~~~v~~--~G~lywl~~~~-~~~~~~il~fDl~~e~-~~~i~~P~~~----~~~~~L~~~--~g~L~~~~~ 265 (376)
-.++.+ +|.+|+.-... ......|+.||+.+.+ ...+.+|... .....+... +|.+++...
T Consensus 69 p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~ 139 (343)
T 2qe8_A 69 VLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDP 139 (343)
T ss_dssp EEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEEC
T ss_pred eeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcC
Confidence 345555 48888876410 0003689999999877 5667776432 111234333 466666654
No 207
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=24.70 E-value=3.1e+02 Score=23.04 Aligned_cols=96 Identities=11% Similarity=0.064 Sum_probs=56.1
Q ss_pred CCEEEEEEcCCceeEEEeCCCcccCcceeEe-cCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeeccccc
Q 046476 225 KPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQ-AEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIM 303 (376)
Q Consensus 225 ~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~-~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~ 303 (376)
+..|..+|+.+.+......... ..-..+.. -+|.+.+.... ...+.||-++. +..... +....
T Consensus 194 d~~i~i~d~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~s~----Dg~i~iwd~~~--------~~~~~~-~~~~~-- 257 (340)
T 4aow_A 194 DKLVKVWNLANCKLKTNHIGHT-GYLNTVTVSPDGSLCASGGK----DGQAMLWDLNE--------GKHLYT-LDGGD-- 257 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCCS-SCEEEEEECTTSSEEEEEET----TCEEEEEETTT--------TEEEEE-EECSS--
T ss_pred CCEEEEEECCCCceeeEecCCC-CcEEEEEECCCCCEEEEEeC----CCeEEEEEecc--------Cceeee-ecCCc--
Confidence 5678889998876644322111 11122322 26666555544 67899996653 233334 33221
Q ss_pred ccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEE
Q 046476 304 FRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERR 342 (376)
Q Consensus 304 ~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~ 342 (376)
....+++.+++.++... .++.+.+||++++...
T Consensus 258 --~v~~~~~~~~~~~~~~~----~d~~i~iwd~~~~~~~ 290 (340)
T 4aow_A 258 --IINALCFSPNRYWLCAA----TGPSIKIWDLEGKIIV 290 (340)
T ss_dssp --CEEEEEECSSSSEEEEE----ETTEEEEEETTTTEEE
T ss_pred --eEEeeecCCCCceeecc----CCCEEEEEECCCCeEE
Confidence 11345666677777766 6888999999887653
No 208
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=24.49 E-value=3.5e+02 Score=23.50 Aligned_cols=135 Identities=7% Similarity=-0.004 Sum_probs=72.1
Q ss_pred CCeEEEEEcCCCCeeecCCCCCccee-cCCceEE---CceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcc-cCcce
Q 046476 178 TPECEIFTLGTTSWRKIDAPPSRIHF-RRQGLCA---NGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEV-RKHHD 252 (376)
Q Consensus 178 ~~~~~vys~~t~~Wr~~~~~~~~~~~-~~~~v~~---~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~-~~~~~ 252 (376)
...+.+|+..++.......... +. .-.++.+ +|.....+. .++.|..+|+.++....+...... .....
T Consensus 95 dg~i~iwd~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~----~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 168 (383)
T 3ei3_B 95 GGDIILWDYDVQNKTSFIQGMG--PGDAITGMKFNQFNTNQLFVSS----IRGATTLRDFSGSVIQVFAKTDSWDYWYCC 168 (383)
T ss_dssp TSCEEEEETTSTTCEEEECCCS--TTCBEEEEEEETTEEEEEEEEE----TTTEEEEEETTSCEEEEEECCCCSSCCEEE
T ss_pred CCeEEEEeCCCcccceeeecCC--cCCceeEEEeCCCCCCEEEEEe----CCCEEEEEECCCCceEEEeccCCCCCCeEE
Confidence 3567888888776554332110 11 1112222 334333333 168899999998877777654422 11122
Q ss_pred eE-ecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCc-EEEEecccCCCcE
Q 046476 253 LI-QAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGE-ILLTEYKSSLVSR 330 (376)
Q Consensus 253 L~-~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~-il~~~~~~~~~~~ 330 (376)
+. .-+|.+.++... ...+.||-++. + .... +..+.- ....+++.+++. +++.. +.++.
T Consensus 169 ~~~~~~~~~l~~~~~----d~~i~i~d~~~-----~----~~~~-~~~h~~---~v~~~~~~~~~~~~l~s~---~~d~~ 228 (383)
T 3ei3_B 169 VDVSVSRQMLATGDS----TGRLLLLGLDG-----H----EIFK-EKLHKA---KVTHAEFNPRCDWLMATS---SVDAT 228 (383)
T ss_dssp EEEETTTTEEEEEET----TSEEEEEETTS-----C----EEEE-EECSSS---CEEEEEECSSCTTEEEEE---ETTSE
T ss_pred EEECCCCCEEEEECC----CCCEEEEECCC-----C----EEEE-eccCCC---cEEEEEECCCCCCEEEEE---eCCCE
Confidence 22 225665555444 67899998731 1 2223 222221 224566667776 55544 16778
Q ss_pred EEEEeCCC
Q 046476 331 VFIYDLKT 338 (376)
Q Consensus 331 v~~ydl~t 338 (376)
+.+||+++
T Consensus 229 i~iwd~~~ 236 (383)
T 3ei3_B 229 VKLWDLRN 236 (383)
T ss_dssp EEEEEGGG
T ss_pred EEEEeCCC
Confidence 88898886
No 209
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=23.91 E-value=3.8e+02 Score=23.73 Aligned_cols=103 Identities=15% Similarity=0.113 Sum_probs=53.0
Q ss_pred CCEEEEEEcCC--ceeEEEeCCC-cc----cCcceeEec-CC-eEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEE
Q 046476 225 KPVLAVFDVKE--EKFDIVKLPD-EV----RKHHDLIQA-EE-KLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDY 295 (376)
Q Consensus 225 ~~~il~fDl~~--e~~~~i~~P~-~~----~~~~~L~~~-~g-~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ 295 (376)
++.|..+|+.+ ..+..+...+ .. ..-..+.-. +| .+.+.... ...+.||-+.... ....-.+...
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~----dg~i~iwd~~~~~--~~~~~~~~~~ 270 (447)
T 3dw8_B 197 DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSS----KGTIRLCDMRASA--LCDRHSKLFE 270 (447)
T ss_dssp SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEET----TSCEEEEETTTCS--SSCTTCEEEC
T ss_pred CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeC----CCeEEEEECcCCc--cccceeeEec
Confidence 78899999983 3344443322 11 111222222 44 55555544 6789999876531 0011112211
Q ss_pred Eeecccc-------cccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCC
Q 046476 296 VFRFDTI-------MFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKT 338 (376)
Q Consensus 296 ii~~~~~-------~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t 338 (376)
-...+. .......+++..+|..++.. ..+.+.+||+++
T Consensus 271 -~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~----~~~~v~iwd~~~ 315 (447)
T 3dw8_B 271 -EPEDPSNRSFFSEIISSISDVKFSHSGRYMMTR----DYLSVKVWDLNM 315 (447)
T ss_dssp -CC-----CCHHHHHTTCEEEEEECTTSSEEEEE----ESSEEEEEETTC
T ss_pred -cCCCccccccccccCceEEEEEECCCCCEEEEe----eCCeEEEEeCCC
Confidence 111100 00022456777788887766 348999999986
No 210
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=23.90 E-value=3.3e+02 Score=23.04 Aligned_cols=110 Identities=8% Similarity=-0.023 Sum_probs=58.3
Q ss_pred ECceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcccCcceeEec----CCeEEEEEecCCCCCCeEEEEEEccCCCC
Q 046476 210 ANGFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEVRKHHDLIQA----EEKLGVLDCDDFRSKNKIRVWILKDYGRG 285 (376)
Q Consensus 210 ~~G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~~~~~~L~~~----~g~L~~~~~~~~~~~~~~~IW~l~~~~~g 285 (376)
-+|.....+. .++.|..||+.+.+......... ....+.-. +|...++... ...+.||-++..
T Consensus 178 ~~~~~l~~~~----~d~~i~i~d~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~--- 244 (357)
T 3i2n_A 178 QEERVVCAGY----DNGDIKLFDLRNMALRWETNIKN--GVCSLEFDRKDISMNKLVATSL----EGKFHVFDMRTQ--- 244 (357)
T ss_dssp -CCCEEEEEE----TTSEEEEEETTTTEEEEEEECSS--CEEEEEESCSSSSCCEEEEEES----TTEEEEEEEEEE---
T ss_pred CCCCEEEEEc----cCCeEEEEECccCceeeecCCCC--ceEEEEcCCCCCCCCEEEEECC----CCeEEEEeCcCC---
Confidence 3565555554 15789999999877643321111 12222222 4555555544 678999988753
Q ss_pred CCCceeEEEEEeecccccccCcEeEEEccCCc-EEEEecccCCCcEEEEEeCCCC
Q 046476 286 GGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGE-ILLTEYKSSLVSRVFIYDLKTQ 339 (376)
Q Consensus 286 ~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~-il~~~~~~~~~~~v~~ydl~t~ 339 (376)
+.........+..+.. ....+.+.+++. +++.. ..++.+.+||+++.
T Consensus 245 -~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~l~~~---~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 245 -HPTKGFASVSEKAHKS---TVWQVRHLPQNRELFLTA---GGAGGLHLWKYEYP 292 (357)
T ss_dssp -ETTTEEEEEEEECCSS---CEEEEEEETTEEEEEEEE---ETTSEEEEEEEECC
T ss_pred -CcccceeeeccCCCcC---CEEEEEECCCCCcEEEEE---eCCCcEEEeecCCC
Confidence 1212111110222221 224556667776 45443 26788999998764
No 211
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=23.75 E-value=1e+02 Score=27.94 Aligned_cols=35 Identities=20% Similarity=0.327 Sum_probs=26.2
Q ss_pred CcEeEEEc--c-CCcEEEEecccCCCcEEEEEeCCCCcEEEE
Q 046476 306 PPIPVSNS--N-NGEILLTEYKSSLVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 306 ~~~~v~~~--~-~g~il~~~~~~~~~~~v~~ydl~t~~~~~v 344 (376)
.++|+++. . -|.|++++ ..+-+++||++|.+.--.
T Consensus 259 ~DFPVamqvs~kygviyviT----K~G~ihlyDleTgt~i~~ 296 (365)
T 2xzh_A 259 NDFPVAMQISEKHDVVFLIT----KYGYIHLYDLETGTCIYM 296 (365)
T ss_dssp TCCEEEEEEETTTTEEEEEE----TTSEEEEEETTTCCEEEE
T ss_pred CCceEEEEecccCCEEEEEe----CCcEEEEEEcccCcEEEE
Confidence 45888653 3 36677777 799999999999987543
No 212
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=23.74 E-value=3.6e+02 Score=23.43 Aligned_cols=104 Identities=14% Similarity=0.025 Sum_probs=56.9
Q ss_pred CCEEEEEEcCCcee-EEEeCCCcccCcceeE-ecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccc
Q 046476 225 KPVLAVFDVKEEKF-DIVKLPDEVRKHHDLI-QAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTI 302 (376)
Q Consensus 225 ~~~il~fDl~~e~~-~~i~~P~~~~~~~~L~-~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~ 302 (376)
++.|..+|..+.+. ..+..|... -..+. .-+|.+.+.... ...+.||.+.... ....-..... +..+..
T Consensus 85 Dg~v~vWd~~~~~~~~~~~~~~~~--v~~~~~sp~g~~lasg~~----d~~i~v~~~~~~~--~~~~~~~~~~-~~~h~~ 155 (354)
T 2pbi_B 85 DGKVIVWDSFTTNKEHAVTMPCTW--VMACAYAPSGCAIACGGL----DNKCSVYPLTFDK--NENMAAKKKS-VAMHTN 155 (354)
T ss_dssp TSEEEEEETTTCCEEEEEECSSSC--CCEEEECTTSSEEEEEST----TSEEEEEECCCCT--TCCSGGGCEE-EEECSS
T ss_pred CCeEEEEECCCCCcceEEecCCCC--EEEEEECCCCCEEEEeeC----CCCEEEEEEeccc--ccccccccee-eeccCC
Confidence 77899999877554 334554431 11222 225665454443 7889999886431 1111122223 222221
Q ss_pred cccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEEE
Q 046476 303 MFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERRA 343 (376)
Q Consensus 303 ~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~~ 343 (376)
....+.+..++..++.. +.++.+.+||+++++...
T Consensus 156 ---~v~~~~~~~~~~~l~t~---s~D~~v~lwd~~~~~~~~ 190 (354)
T 2pbi_B 156 ---YLSACSFTNSDMQILTA---SGDGTCALWDVESGQLLQ 190 (354)
T ss_dssp ---CEEEEEECSSSSEEEEE---ETTSEEEEEETTTCCEEE
T ss_pred ---cEEEEEEeCCCCEEEEE---eCCCcEEEEeCCCCeEEE
Confidence 22445666666655443 268899999999886543
No 213
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=23.66 E-value=5.1e+02 Score=25.12 Aligned_cols=210 Identities=9% Similarity=-0.005 Sum_probs=0.0
Q ss_pred cccceEEEEEecCc---------------------------------EEEEEecCC-cceecCCCCCcccCCCCCCCCCC
Q 046476 89 LINGFICFYNIVGF---------------------------------EILMRNVVT-QEIIDLPKSTFVVSDDDEDFSGP 134 (376)
Q Consensus 89 s~nGLl~~~~~~~~---------------------------------~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~ 134 (376)
|-+|-.+....... .++++|..+ ++...+.......
T Consensus 217 SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~---------- 286 (741)
T 2ecf_A 217 APDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQD---------- 286 (741)
T ss_dssp CTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSS----------
T ss_pred CCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcc----------
Q ss_pred ccceeeEEEEEEeCCCCCeEEEEEEecCCCCCCcccceecCCCCCeEEEEEcCCCCeeecCCCCCccee---cCCceEEC
Q 046476 135 MISYFREYFLGFDPSSRDYKVLNISNKHTTNSSSYAWMIDNHGTPECEIFTLGTTSWRKIDAPPSRIHF---RRQGLCAN 211 (376)
Q Consensus 135 ~~~~~~~~~~g~d~~~~~ykVv~~~~~~~~~~~~~~~~~~~~~~~~~~vys~~t~~Wr~~~~~~~~~~~---~~~~v~~~ 211 (376)
.....+.+ |.....-+........ ...+.+++..++..+.+......... ......-|
T Consensus 287 ----~~~~~~~~-pDg~~l~~~~~~~~~~--------------~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spd 347 (741)
T 2ecf_A 287 ----IYLARVNW-RDPQHLSFQRQSRDQK--------------KLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDD 347 (741)
T ss_dssp ----EEEEEEEE-EETTEEEEEEEETTSS--------------EEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTT
T ss_pred ----eEEEEEEe-CCCCEEEEEEecccCC--------------eEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCC
Q ss_pred ceEEEEEeCCCCCCCEEEEEEcCCceeEEEeCCCcc-cCcceeEecCCeEEEEEecCCCCCCeEEEEEEccCCCCCCCce
Q 046476 212 GFIHWIITNPRKTKPVLAVFDVKEEKFDIVKLPDEV-RKHHDLIQAEEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVW 290 (376)
Q Consensus 212 G~lywl~~~~~~~~~~il~fDl~~e~~~~i~~P~~~-~~~~~L~~~~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W 290 (376)
|.+++.+. .+....|..+|+... ...+...... .....+..-++.|++.... .....+.||.++-.| ...
T Consensus 348 g~~~~~~~--~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~--~~~~~~~l~~~~~~g--~~~-- 418 (741)
T 2ecf_A 348 GSILWSSE--RTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGI--ESARESQIYAVPLQG--GQP-- 418 (741)
T ss_dssp SCEEEEEC--TTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECS--SCTTCBEEEEEETTC--CCC--
T ss_pred CeEEEEec--CCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeC--CCCceEEEEEEEcCC--CCe--
Q ss_pred eEEEEEeecccccccCcEeEEEccCCc-EEEEecccCCCcEEEEEeCCCCcEEEE
Q 046476 291 IRRDYVFRFDTIMFRPPIPVSNSNNGE-ILLTEYKSSLVSRVFIYDLKTQERRAI 344 (376)
Q Consensus 291 ~~~~~ii~~~~~~~~~~~~v~~~~~g~-il~~~~~~~~~~~v~~ydl~t~~~~~v 344 (376)
.. +.. .- ....+.+..+|+ +++..........++.+|+++++.+.+
T Consensus 419 ---~~-l~~-~~---~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~~~l 465 (741)
T 2ecf_A 419 ---QR-LSK-AP---GMHSASFARNASVYVDSWSNNSTPPQIELFRANGEKIATL 465 (741)
T ss_dssp ---EE-CCC-SC---SEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCEEECS
T ss_pred ---ee-ccc-CC---CceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCeEEEe
No 214
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.93 E-value=68 Score=21.73 Aligned_cols=16 Identities=31% Similarity=0.337 Sum_probs=13.8
Q ss_pred CCcEEEEEeCCCCcEE
Q 046476 327 LVSRVFIYDLKTQERR 342 (376)
Q Consensus 327 ~~~~v~~ydl~t~~~~ 342 (376)
.++++|+||..|++-.
T Consensus 28 ~dGR~fyyN~~Tk~S~ 43 (73)
T 2dk7_A 28 GDERVFFYNPTTRLSM 43 (73)
T ss_dssp SSSCEEEEETTTTEEC
T ss_pred CCCCEEEecCccccee
Confidence 7899999999998653
No 215
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=22.76 E-value=3.6e+02 Score=25.94 Aligned_cols=80 Identities=9% Similarity=-0.030 Sum_probs=48.2
Q ss_pred CeEEEEEcCCCC--eeecCCCCCcceecCCceEECceEEEEEeCCCCCCCEEEEEEcCCceeE-EEeCCCcccCcceeEe
Q 046476 179 PECEIFTLGTTS--WRKIDAPPSRIHFRRQGLCANGFIHWIITNPRKTKPVLAVFDVKEEKFD-IVKLPDEVRKHHDLIQ 255 (376)
Q Consensus 179 ~~~~vys~~t~~--Wr~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~-~i~~P~~~~~~~~L~~ 255 (376)
-.+..++..|++ |+.....+ ......+..+|.+|.-+. ++.+.+||.++.+-- .+++|..........+
T Consensus 466 G~l~A~D~~tG~~~W~~~~~~~---~~~g~~~tagglvf~g~~-----dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~ 537 (582)
T 1flg_A 466 GSLRAMDPVSGKVVWEHKEHLP---LWAGVLATAGNLVFTGTG-----DGYFKAFDAKSGKELWKFQTGSGIVSPPITWE 537 (582)
T ss_dssp EEEEEECTTTCCEEEEEEESSC---CCSCCEEETTTEEEEECT-----TSEEEEEETTTCCEEEEEECSSCCCSCCEEEE
T ss_pred ceEEEEECCCCCEEEEecCCCC---CcccceEeCCCEEEEECC-----CCcEEEEECCCCCEEEEecCCCCcccCceEEE
Confidence 456677777764 88654321 112223445788887433 789999999875432 3566655422222335
Q ss_pred cCCeEEEEEec
Q 046476 256 AEEKLGVLDCD 266 (376)
Q Consensus 256 ~~g~L~~~~~~ 266 (376)
.+|+++++...
T Consensus 538 ~~G~qYv~~~~ 548 (582)
T 1flg_A 538 QDGEQYLGVTV 548 (582)
T ss_dssp ETTEEEEEEEE
T ss_pred ECCEEEEEEEc
Confidence 79999988765
No 216
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=22.09 E-value=5.5e+02 Score=24.96 Aligned_cols=150 Identities=11% Similarity=0.057 Sum_probs=78.2
Q ss_pred CCeEEEEEcCC------C--CeeecCCCCCcceecCCceEEC-ceEEEEEeCCCCCCCEEEEEEcCCc---eeEEEeCCC
Q 046476 178 TPECEIFTLGT------T--SWRKIDAPPSRIHFRRQGLCAN-GFIHWIITNPRKTKPVLAVFDVKEE---KFDIVKLPD 245 (376)
Q Consensus 178 ~~~~~vys~~t------~--~Wr~~~~~~~~~~~~~~~v~~~-G~lywl~~~~~~~~~~il~fDl~~e---~~~~i~~P~ 245 (376)
...+.+++..+ + .++.+...... ....+..+ +.+|+.+.. ......|..+|+++. .|+.+-.+.
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~---~~~~~s~dg~~l~~~s~~-~~~~~~l~~~d~~~~~~~~~~~l~~~~ 333 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNFEG---EYDYVTNEGTVFTFKTNR-HSPNYRLINIDFTDPEESKWKVLVPEH 333 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSSSS---CEEEEEEETTEEEEEECT-TCTTCEEEEEETTSCCGGGCEEEECCC
T ss_pred ccEEEEEECcccccccCCccceEEeeCCCCc---EEEEEeccCCEEEEEECC-CCCCCEEEEEeCCCCCcccceeccCCC
Confidence 35677777765 4 56665432110 11123333 567777652 112567999999875 466664332
Q ss_pred cccCcceeEec-CCeEEEEEecCCCCCCeEEEEEEcc-CCCCCCCceeEEEEEeecccccccCcEeEEEccCCc-EEEEe
Q 046476 246 EVRKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKD-YGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGE-ILLTE 322 (376)
Q Consensus 246 ~~~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~-~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~-il~~~ 322 (376)
.......+... ++.|.+.... .....||+++- .| . .... +.... .....++...++. +++..
T Consensus 334 ~~~~~~~~~~~~~~~lv~~~~~----~g~~~l~~~~~~~g-----~--~~~~-l~~~~---~~v~~~~~s~d~~~l~~~~ 398 (710)
T 2xdw_A 334 EKDVLEWVACVRSNFLVLCYLH----DVKNTLQLHDLATG-----A--LLKI-FPLEV---GSVVGYSGQKKDTEIFYQF 398 (710)
T ss_dssp SSCEEEEEEEETTTEEEEEEEE----TTEEEEEEEETTTC-----C--EEEE-ECCCS---SEEEEEECCTTCSEEEEEE
T ss_pred CCCeEEEEEEEcCCEEEEEEEE----CCEEEEEEEECCCC-----C--EEEe-cCCCC---ceEEEEecCCCCCEEEEEE
Confidence 21011123334 6777776655 45566777763 22 1 1233 22211 1112334444554 55554
Q ss_pred cccCCCcEEEEEeCCCCc--EEEEEE
Q 046476 323 YKSSLVSRVFIYDLKTQE--RRAIKI 346 (376)
Q Consensus 323 ~~~~~~~~v~~ydl~t~~--~~~v~~ 346 (376)
........++.||+++++ .+.++-
T Consensus 399 ss~~~P~~i~~~d~~tg~~~~~~l~~ 424 (710)
T 2xdw_A 399 TSFLSPGIIYHCDLTKEELEPRVFRE 424 (710)
T ss_dssp ECSSCCCEEEEEETTSSSCCCEEEEE
T ss_pred eCCCCCCEEEEEECCCCccceEEeee
Confidence 333467799999999887 555543
No 217
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=21.41 E-value=3.6e+02 Score=22.54 Aligned_cols=98 Identities=11% Similarity=0.089 Sum_probs=52.7
Q ss_pred EEEEEEcCCceeEEEeCCCcccCcceeEec-CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeeccccccc
Q 046476 227 VLAVFDVKEEKFDIVKLPDEVRKHHDLIQA-EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFR 305 (376)
Q Consensus 227 ~il~fDl~~e~~~~i~~P~~~~~~~~L~~~-~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~ 305 (376)
.|..+|+.+.+...+..+........+... +|+..++. ...+.+|-++. ...... ++...
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~------~~~v~~~d~~~--------~~~~~~-~~~~~---- 280 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA------YNVLESFDLEK--------NASIKR-VPLPH---- 280 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE------ESEEEEEETTT--------TEEEEE-EECSS----
T ss_pred ceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe------CCeEEEEECCC--------CcCcce-ecCCC----
Confidence 588999998877644443221111123222 55443333 24566665432 222233 33211
Q ss_pred CcEeEEEccCCcEEEEecccCCCcEEEEEeCCCCcEE-EEEE
Q 046476 306 PPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKTQERR-AIKI 346 (376)
Q Consensus 306 ~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t~~~~-~v~~ 346 (376)
....+++.++|+.++.. ..++.+.+||+++++.. .+..
T Consensus 281 ~~~~~~~s~dg~~l~~~---~~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 281 SYYSVNVSTDGSTVWLG---GALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp CCCEEEECTTSCEEEEE---SBSSEEEEEETTTCCEEEEEEC
T ss_pred ceeeEEECCCCCEEEEE---cCCCcEEEEECcCCcEEEEEEc
Confidence 11346777788766554 25789999999987654 4444
No 218
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=21.20 E-value=5.9e+02 Score=25.10 Aligned_cols=58 Identities=16% Similarity=0.224 Sum_probs=34.9
Q ss_pred cCCceEEC---ceEEEEEeCCCCCCCEEEEEEcCCceeEEE-eCCCcccCcceeEecCCeEEEEEe
Q 046476 204 RRQGLCAN---GFIHWIITNPRKTKPVLAVFDVKEEKFDIV-KLPDEVRKHHDLIQAEEKLGVLDC 265 (376)
Q Consensus 204 ~~~~v~~~---G~lywl~~~~~~~~~~il~fDl~~e~~~~i-~~P~~~~~~~~L~~~~g~L~~~~~ 265 (376)
...++.++ |.|||.-. ....|.++|+....-+.+ ..+........|...++.|+++..
T Consensus 541 ~PnGlavd~~~~~LY~aD~----~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~ 602 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVDS----KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDI 602 (699)
T ss_dssp SCCCEEECTTTCCEEEEET----TTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECS
T ss_pred CccEEEEeccCCEEEEEec----CCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeC
Confidence 34566664 89999765 167899999976444443 222221223345566777777764
No 219
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=20.59 E-value=3.1e+02 Score=24.45 Aligned_cols=70 Identities=11% Similarity=0.141 Sum_probs=0.0
Q ss_pred CCeEEEEEecCCCCCCeEEEEEEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeC
Q 046476 257 EEKLGVLDCDDFRSKNKIRVWILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDL 336 (376)
Q Consensus 257 ~g~L~~~~~~~~~~~~~~~IW~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl 336 (376)
+|.+.++... ...+.||-++.. +..+..... -....+ ..+++..++..++.. +.++.+.+||+
T Consensus 181 ~~~~l~~~~~----d~~i~iwd~~~~----~~~~~~~~~-~h~~~v-----~~~~~s~~~~~l~s~---~~dg~i~iwd~ 243 (437)
T 3gre_A 181 EKSLLVALTN----LSRVIIFDIRTL----ERLQIIENS-PRHGAV-----SSICIDEECCVLILG---TTRGIIDIWDI 243 (437)
T ss_dssp SCEEEEEEET----TSEEEEEETTTC----CEEEEEECC-GGGCCE-----EEEEECTTSCEEEEE---ETTSCEEEEET
T ss_pred CCCEEEEEeC----CCeEEEEeCCCC----eeeEEEccC-CCCCce-----EEEEECCCCCEEEEE---cCCCeEEEEEc
Q ss_pred CCCcEEE
Q 046476 337 KTQERRA 343 (376)
Q Consensus 337 ~t~~~~~ 343 (376)
++++...
T Consensus 244 ~~~~~~~ 250 (437)
T 3gre_A 244 RFNVLIR 250 (437)
T ss_dssp TTTEEEE
T ss_pred CCccEEE
No 220
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=20.53 E-value=4e+02 Score=25.87 Aligned_cols=80 Identities=11% Similarity=0.038 Sum_probs=47.7
Q ss_pred CeEEEEEcCCC--CeeecCCCCCcceecCCceEECceEEEEEeCCCCCCCEEEEEEcCCceeE-EEeCCCcccCcceeEe
Q 046476 179 PECEIFTLGTT--SWRKIDAPPSRIHFRRQGLCANGFIHWIITNPRKTKPVLAVFDVKEEKFD-IVKLPDEVRKHHDLIQ 255 (376)
Q Consensus 179 ~~~~vys~~t~--~Wr~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fDl~~e~~~-~i~~P~~~~~~~~L~~ 255 (376)
-.+..++..|+ .|+.....+ .....-+..+|.+|.-+. ++.+.+||.++.+-- ..++|..........+
T Consensus 453 G~l~A~D~~tG~~~W~~~~~~~---~~~g~~~tagg~vf~gt~-----dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~ 524 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKMERFA---VWGGTMATAGDLVFYGTL-----DGYLKARDSDTGDLLWKFKIPSGAIGYPMTYT 524 (599)
T ss_dssp EEEEEECTTTCCEEEEEEESSC---CCSBCEEETTTEEEEECT-----TSEEEEEETTTCCEEEEEECSSCCCSCCEEEE
T ss_pred CeEEEEECCCCCEEeEecCCCC---ccCcceEecCCEEEEECC-----CCeEEEEECCCCCEEEEeeCCCCcEeccEEEE
Confidence 35666777776 487643321 111112334677777433 789999999875432 2467765423333345
Q ss_pred cCCeEEEEEec
Q 046476 256 AEEKLGVLDCD 266 (376)
Q Consensus 256 ~~g~L~~~~~~ 266 (376)
.+|+++++...
T Consensus 525 ~~G~qyv~~~~ 535 (599)
T 1w6s_A 525 HKGTQYVAIYY 535 (599)
T ss_dssp ETTEEEEEEEE
T ss_pred eCCEEEEEEEc
Confidence 79999888765
No 221
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=20.35 E-value=4.1e+02 Score=22.76 Aligned_cols=118 Identities=13% Similarity=0.092 Sum_probs=59.5
Q ss_pred CCceEE--C-ceEEEEEeCCCCCCCEEEEEEcCCcee-EEEeCCCcccCcceeEecCCeEEEEEecC---CCCCCeEEEE
Q 046476 205 RQGLCA--N-GFIHWIITNPRKTKPVLAVFDVKEEKF-DIVKLPDEVRKHHDLIQAEEKLGVLDCDD---FRSKNKIRVW 277 (376)
Q Consensus 205 ~~~v~~--~-G~lywl~~~~~~~~~~il~fDl~~e~~-~~i~~P~~~~~~~~L~~~~g~L~~~~~~~---~~~~~~~~IW 277 (376)
..++.+ + |.+|+... . ...|..||+++.++ ..+..|........+....|.++...... +.....+.+|
T Consensus 198 p~gia~d~~~g~l~v~d~---~-~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~ 273 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADR---E-NGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVM 273 (329)
T ss_dssp EEEEEEETTTTEEEEEET---T-TTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEE
T ss_pred CcEEEEECCCCEEEEEEC---C-CCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEE
Confidence 345555 4 78877654 2 67899999995555 44544432211112222224443333221 1224466666
Q ss_pred EEccCCCCCCCceeEEEEEeecccccccCcEeEEEccCCcEEEEecccCCCcEEEEEeCCC
Q 046476 278 ILKDYGRGGGEVWIRRDYVFRFDTIMFRPPIPVSNSNNGEILLTEYKSSLVSRVFIYDLKT 338 (376)
Q Consensus 278 ~l~~~~~g~~~~W~~~~~ii~~~~~~~~~~~~v~~~~~g~il~~~~~~~~~~~v~~ydl~t 338 (376)
-++.. .. +.. ++...-.+....-+++..+|.+++... ..+.|..|+++.
T Consensus 274 ~~~~g------~~--~~~-~~~~~~~~~~p~~ia~~~dG~lyvad~---~~~~I~~~~~~~ 322 (329)
T 3fvz_A 274 NFSSG------EI--IDV-FKPVRKHFDMPHDIVASEDGTVYIGDA---HTNTVWKFTLTE 322 (329)
T ss_dssp ETTTC------CE--EEE-ECCSSSCCSSEEEEEECTTSEEEEEES---SSCCEEEEEEEE
T ss_pred EcCCC------eE--EEE-EcCCCCccCCeeEEEECCCCCEEEEEC---CCCEEEEEeCCc
Confidence 54432 22 223 332111122224467777887777662 466788887754
Done!