BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046482
(162 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 62/155 (40%), Gaps = 33/155 (21%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT------------QSNNFNDV 48
+KA+NILLDE+ + + DF ++ D + GT +S+ DV
Sbjct: 168 VKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VRGTIGHIAPEYLSTGKSSEKTDV 226
Query: 49 CNYSV--------------------PQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKL 88
Y V + W L K+ K L+D L + ++
Sbjct: 227 FGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEV 286
Query: 89 LTCLQIALLCVQENPNGRPSMLEVYSMLKNENTAD 123
+Q+ALLC Q +P RP M EV ML+ + A+
Sbjct: 287 EQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAE 321
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 61/154 (39%), Gaps = 31/154 (20%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIF------VKDDLEANTNRIV-----GTQSNNFNDVC 49
+KA+NILLDE+ + + DF ++ V + I +S+ DV
Sbjct: 160 VKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVF 219
Query: 50 NYSV--------------------PQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLL 89
Y V + W L K+ K L+D L + ++
Sbjct: 220 GYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVE 279
Query: 90 TCLQIALLCVQENPNGRPSMLEVYSMLKNENTAD 123
+Q+ALLC Q +P RP M EV ML+ + A+
Sbjct: 280 QLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAE 313
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 14/94 (14%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGTQSNNFNDVCNYSVPQWLHPS 60
+K++NILLDE KISDF R K +RIVGT + Y P+ L
Sbjct: 150 IKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTA--------YXAPEALRGE 201
Query: 61 WSYKLWKDGKGIKLMD-----PSLDDAHSSWKLL 89
+ K G+ L++ P++D+ H +LL
Sbjct: 202 ITPKSDIYSFGVVLLEIITGLPAVDE-HREPQLL 234
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 58/145 (40%), Gaps = 29/145 (20%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGTQS-----------NNFNDVC 49
+K++NILLDE KISDF R K +RIVGT + +D+
Sbjct: 159 IKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGEITPKSDIY 218
Query: 50 NYSV-----------------PQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTCL 92
++ V PQ L ++ +D ++DA S+ +
Sbjct: 219 SFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADST-SVEAMY 277
Query: 93 QIALLCVQENPNGRPSMLEVYSMLK 117
+A C+ E N RP + +V +L+
Sbjct: 278 SVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK NILL+ED+ +I+DF ++ + +A N VGT
Sbjct: 161 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGTQSNNFNDVCNYSVPQWLHPS 60
+K++NILLDE KISDF R K RIVGT + Y P+ L
Sbjct: 159 IKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTA--------YMAPEALRGE 210
Query: 61 WSYKLWKDGKGIKLMD-----PSLDDAHSSWKLL 89
+ K G+ L++ P++D+ H +LL
Sbjct: 211 ITPKSDIYSFGVVLLEIITGLPAVDE-HREPQLL 243
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK NILL+ED+ +I+DF ++ + +A N VGT
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK NILL+ED+ +I+DF ++ + +A N VGT
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK NILL+ED+ +I+DF ++ + +A N VGT
Sbjct: 159 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK NILL+ED+ +I+DF ++ + +A N VGT
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK NILL+ED+ +I+DF ++ + +A N VGT
Sbjct: 159 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK NILL+ED+ +I+DF ++ + +A N VGT
Sbjct: 163 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK NILL+ED+ +I+DF ++ + +A N VGT
Sbjct: 156 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK NILL+ED+ +I+DF ++ + +A N VGT
Sbjct: 156 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK NILL+ED+ +I+DF ++ + +A N VGT
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK NILL+ED+ +I+DF ++ + +A N VGT
Sbjct: 156 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK NILL+ED+ +I+DF ++ + +A N VGT
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGTQSNNFNDVCNYSVPQWLHPS 60
+K++NILLDE KISDF R K RIVGT + Y P+ L
Sbjct: 153 IKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTA--------YMAPEALRGE 204
Query: 61 WSYKLWKDGKGIKLMD-----PSLDDAHSSWKLL 89
+ K G+ L++ P++D+ H +LL
Sbjct: 205 ITPKSDIYSFGVVLLEIITGLPAVDE-HREPQLL 237
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK NILL+ED+ +I+DF ++ + +A N VGT
Sbjct: 136 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK NILL+ED+ +I+DF ++ + +A N VGT
Sbjct: 158 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK NILL+ED+ +I+DF ++ + +A N VGT
Sbjct: 155 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK NILL+ED+ +I+DF ++ + +A N VGT
Sbjct: 135 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK NILL+ED+ +I+DF ++ + +A N VGT
Sbjct: 156 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK NILL+ED+ +I+DF ++ + +A N VGT
Sbjct: 155 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK NILL+ED+ +I+DF ++ + +A N VGT
Sbjct: 134 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK NILL+ED+ +I+DF ++ + +A N VGT
Sbjct: 133 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK NILL+ED+ +I+DF ++ + +A N VGT
Sbjct: 140 LKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 22/147 (14%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNR-------------IVGTQSNNFND 47
L A NIL++ +L K+SDF R+ D A T R I + + +D
Sbjct: 173 LAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 232
Query: 48 VCNYSVPQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTC----LQIALLCVQENP 103
V +Y + W S+ + + + ++ ++D+ + + C Q+ L C Q++
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQDVIK-AVDEGYRLPPPMDCPAALYQLMLDCWQKDR 291
Query: 104 NGRPSMLEVYSML----KNENTADIMT 126
N RP ++ S+L +N + I+T
Sbjct: 292 NNRPKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 22/147 (14%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNR-------------IVGTQSNNFND 47
L A NIL++ +L K+SDF R+ D A T R I + + +D
Sbjct: 144 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 203
Query: 48 VCNYSVPQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTC----LQIALLCVQENP 103
V +Y + W S+ + + + ++ ++D+ + + C Q+ L C Q++
Sbjct: 204 VWSYGIVLWEVMSYGERPYWEMSNQDVIK-AVDEGYRLPPPMDCPAALYQLMLDCWQKDR 262
Query: 104 NGRPSMLEVYSML----KNENTADIMT 126
N RP ++ S+L +N + I+T
Sbjct: 263 NNRPKFEQIVSILDKLIRNPGSLKIIT 289
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 22/147 (14%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNR-------------IVGTQSNNFND 47
L A NIL++ +L K+SDF R+ D A T R I + + +D
Sbjct: 171 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 230
Query: 48 VCNYSVPQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTC----LQIALLCVQENP 103
V +Y + W S+ + + + ++ ++D+ + + C Q+ L C Q++
Sbjct: 231 VWSYGIVLWEVMSYGERPYWEMSNQDVIK-AVDEGYRLPPPMDCPAALYQLMLDCWQKDR 289
Query: 104 NGRPSMLEVYSML----KNENTADIMT 126
N RP ++ S+L +N + I+T
Sbjct: 290 NNRPKFEQIVSILDKLIRNPGSLKIIT 316
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 22/147 (14%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNR-------------IVGTQSNNFND 47
L A NIL++ +L K+SDF R+ D A T R I + + +D
Sbjct: 144 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 203
Query: 48 VCNYSVPQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTC----LQIALLCVQENP 103
V +Y + W S+ + + + ++ ++D+ + + C Q+ L C Q++
Sbjct: 204 VWSYGIVLWEVMSYGERPYWEMSNQDVIK-AVDEGYRLPPPMDCPAALYQLMLDCWQKDR 262
Query: 104 NGRPSMLEVYSML----KNENTADIMT 126
N RP ++ S+L +N + I+T
Sbjct: 263 NNRPKFEQIVSILDKLIRNPGSLKIIT 289
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 22/147 (14%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNR-------------IVGTQSNNFND 47
L A NIL++ +L K+SDF R+ D A T R I + + +D
Sbjct: 161 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 220
Query: 48 VCNYSVPQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTC----LQIALLCVQENP 103
V +Y + W S+ + + + ++ ++D+ + + C Q+ L C Q++
Sbjct: 221 VWSYGIVLWEVMSYGERPYWEMSNQDVIK-AVDEGYRLPPPMDCPAALYQLMLDCWQKDR 279
Query: 104 NGRPSMLEVYSML----KNENTADIMT 126
N RP ++ S+L +N + I+T
Sbjct: 280 NNRPKFEQIVSILDKLIRNPGSLKIIT 306
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 22/147 (14%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNR-------------IVGTQSNNFND 47
L A NIL++ +L K+SDF R+ D A T R I + + +D
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 232
Query: 48 VCNYSVPQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTC----LQIALLCVQENP 103
V +Y + W S+ + + + ++ ++D+ + + C Q+ L C Q++
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQDVIK-AVDEGYRLPPPMDCPAALYQLMLDCWQKDR 291
Query: 104 NGRPSMLEVYSML----KNENTADIMT 126
N RP ++ S+L +N + I+T
Sbjct: 292 NNRPKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 22/147 (14%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNR-------------IVGTQSNNFND 47
L A NIL++ +L K+SDF R+ D A T R I + + +D
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 232
Query: 48 VCNYSVPQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTC----LQIALLCVQENP 103
V +Y + W S+ + + + ++ ++D+ + + C Q+ L C Q++
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQDVIK-AVDEGYRLPPPMDCPAALYQLMLDCWQKDR 291
Query: 104 NGRPSMLEVYSML----KNENTADIMT 126
N RP ++ S+L +N + I+T
Sbjct: 292 NNRPKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 22/147 (14%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNR-------------IVGTQSNNFND 47
L A NIL++ +L K+SDF R+ D A T R I + + +D
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 232
Query: 48 VCNYSVPQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTC----LQIALLCVQENP 103
V +Y + W S+ + + + ++ ++D+ + + C Q+ L C Q++
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQDVIK-AVDEGYRLPPPMDCPAALYQLMLDCWQKDR 291
Query: 104 NGRPSMLEVYSML----KNENTADIMT 126
N RP ++ S+L +N + I+T
Sbjct: 292 NNRPKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 22/147 (14%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNR-------------IVGTQSNNFND 47
L A NIL++ +L K+SDF R+ D A T R I + + +D
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 232
Query: 48 VCNYSVPQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTC----LQIALLCVQENP 103
V +Y + W S+ + + + ++ ++D+ + + C Q+ L C Q++
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQDVIK-AVDEGYRLPPPMDCPAALYQLMLDCWQKDR 291
Query: 104 NGRPSMLEVYSML----KNENTADIMT 126
N RP ++ S+L +N + I+T
Sbjct: 292 NNRPKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 22/147 (14%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNR-------------IVGTQSNNFND 47
L A NIL++ +L K+SDF R+ D A T R I + + +D
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 232
Query: 48 VCNYSVPQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTC----LQIALLCVQENP 103
V +Y + W S+ + + + ++ ++D+ + + C Q+ L C Q++
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQDVIK-AVDEGYRLPPPMDCPAALYQLMLDCWQKDR 291
Query: 104 NGRPSMLEVYSML----KNENTADIMT 126
N RP ++ S+L +N + I+T
Sbjct: 292 NNRPKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 22/147 (14%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNR-------------IVGTQSNNFND 47
L A NIL++ +L K+SDF R+ D A T R I + + +D
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 232
Query: 48 VCNYSVPQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTC----LQIALLCVQENP 103
V +Y + W S+ + + + ++ ++D+ + + C Q+ L C Q++
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQDVIK-AVDEGYRLPPPMDCPAALYQLMLDCWQKDR 291
Query: 104 NGRPSMLEVYSML----KNENTADIMT 126
N RP ++ S+L +N + I+T
Sbjct: 292 NNRPKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 22/147 (14%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNR-------------IVGTQSNNFND 47
L A NIL++ +L K+SDF R+ D A T R I + + +D
Sbjct: 173 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 232
Query: 48 VCNYSVPQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTC----LQIALLCVQENP 103
V +Y + W S+ + + + ++ ++D+ + + C Q+ L C Q++
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQDVIK-AVDEGYRLPPPMDCPAALYQLMLDCWQKDR 291
Query: 104 NGRPSMLEVYSML----KNENTADIMT 126
N RP ++ S+L +N + I+T
Sbjct: 292 NNRPKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 18/133 (13%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNR-------------IVGTQSNNFND 47
L A NIL++ +L K+SDF R+ D A T R I + + +D
Sbjct: 150 LAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASD 209
Query: 48 VCNYSVPQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTC----LQIALLCVQENP 103
V +Y + W S+ + + + ++ ++++ + + C Q+ L C Q+
Sbjct: 210 VWSYGIVMWEVVSYGERPYWEMTNQDVIK-AVEEGYRLPSPMDCPAALYQLMLDCWQKER 268
Query: 104 NGRPSMLEVYSML 116
N RP E+ +ML
Sbjct: 269 NSRPKFDEIVNML 281
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 22/147 (14%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNR-------------IVGTQSNNFND 47
L A NIL++ +L K+SDF R+ D A T R I + + +D
Sbjct: 173 LAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 232
Query: 48 VCNYSVPQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTC----LQIALLCVQENP 103
V +Y + W S+ + + + ++ ++D+ + + C Q+ L C Q++
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQDVIK-AVDEGYRLPPPMDCPAALYQLMLDCWQKDR 291
Query: 104 NGRPSMLEVYSML----KNENTADIMT 126
N RP ++ S+L +N + I+T
Sbjct: 292 NNRPKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 32.7 bits (73), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 17/135 (12%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTN------RIVGTQS------NNFNDV 48
L A N ++ ED KI DF R + D R + +S ++DV
Sbjct: 149 LAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDV 208
Query: 49 CNYSVPQWLHPSWS---YKLWKDGKGIK-LMDPSLDDAHSSWKLLTCLQIALLCVQENPN 104
++ V W + + Y+ + + ++ +M+ L D + + L++ +C Q NP
Sbjct: 209 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LLELMRMCWQYNPK 267
Query: 105 GRPSMLEVYSMLKNE 119
RPS LE+ S +K E
Sbjct: 268 MRPSFLEIISSIKEE 282
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
+K N+LLDE KISDF +F ++ E N++ GT
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
+K N+LLDE KISDF +F ++ E N++ GT
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
+K N+LLDE KISDF +F ++ E N++ GT
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
+K N+LLDE KISDF +F ++ E N++ GT
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
+K N+LLDE KISDF +F ++ E N++ GT
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
+K N+LLDE KISDF +F ++ E N++ GT
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTN------RIVGTQS------NNFNDV 48
L A N ++ ED KI DF R + D R + +S ++DV
Sbjct: 158 LAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDV 217
Query: 49 CNYSVPQWLHPSWS---YKLWKDGKGIK-LMDPSLDDAHSSWKLLTCLQIALLCVQENPN 104
++ V W + + Y+ + + ++ +M+ L D + + ++ +C Q NP
Sbjct: 218 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPK 276
Query: 105 GRPSMLEVYSMLKNE 119
RPS LE+ S +K E
Sbjct: 277 MRPSFLEIISSIKEE 291
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
+K N+LLDE KISDF +F ++ E N++ GT
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
+K N+LLDE KISDF +F ++ E N++ GT
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
+K N+LLDE KISDF +F ++ E N++ GT
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
+K N+LLDE KISDF +F ++ E N++ GT
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
+K N+LLDE KISDF +F ++ E N++ GT
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
+K N+LLDE KISDF +F ++ E N++ GT
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
+K N+LLDE KISDF +F ++ E N++ GT
Sbjct: 129 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 168
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
+K N+LLDE KISDF +F ++ E N++ GT
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 18/133 (13%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNR-------------IVGTQSNNFND 47
L A NIL++ +L K+SDF R+ D A T R I + + +D
Sbjct: 157 LAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASD 216
Query: 48 VCNYSVPQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTC----LQIALLCVQENP 103
V +Y + W S+ + + D ++ ++++ + + C Q+ L C Q+
Sbjct: 217 VWSYGIVMWEVMSYGERPYWDMSNQDVIK-AIEEGYRLPPPMDCPIALHQLMLDCWQKER 275
Query: 104 NGRPSMLEVYSML 116
+ RP ++ +ML
Sbjct: 276 SDRPKFGQIVNML 288
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 11/58 (18%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGTQSNNFNDVCNYSVPQWLH 58
LKA N+LLD D+ KI+DF F F VG + + F Y+ P+
Sbjct: 140 LKAENLLLDADMNIKIADFGFSNEFT-----------VGGKLDAFCGAPPYAAPELFQ 186
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
+K N+LLDE KISDF +F ++ E N++ GT
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
+K N+LLDE KISDF +F ++ E N++ GT
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 18/133 (13%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNR-------------IVGTQSNNFND 47
L A NIL++ +L K+SDF R+ D A T R I + + +D
Sbjct: 142 LAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASD 201
Query: 48 VCNYSVPQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTC----LQIALLCVQENP 103
V +Y + W S+ + + D ++ ++++ + + C Q+ L C Q+
Sbjct: 202 VWSYGIVMWEVMSYGERPYWDMSNQDVIK-AIEEGYRLPPPMDCPIALHQLMLDCWQKER 260
Query: 104 NGRPSMLEVYSML 116
+ RP ++ +ML
Sbjct: 261 SDRPKFGQIVNML 273
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 18/133 (13%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNR-------------IVGTQSNNFND 47
L A NIL++ +L K+SDF R+ D A T R I + + +D
Sbjct: 136 LAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASD 195
Query: 48 VCNYSVPQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTC----LQIALLCVQENP 103
V +Y + W S+ + + D ++ ++++ + + C Q+ L C Q+
Sbjct: 196 VWSYGIVMWEVMSYGERPYWDMSNQDVIK-AIEEGYRLPPPMDCPIALHQLMLDCWQKER 254
Query: 104 NGRPSMLEVYSML 116
+ RP ++ +ML
Sbjct: 255 SDRPKFGQIVNML 267
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
+K N+LLDE KISDF +F ++ E N++ GT
Sbjct: 131 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 170
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 11/58 (18%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGTQSNNFNDVCNYSVPQWLH 58
LKA N+LLD D+ KI+DF F F VG + + F Y+ P+
Sbjct: 137 LKAENLLLDADMNIKIADFGFSNEFT-----------VGGKLDTFCGSPPYAAPELFQ 183
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
+K N+LLDE KISDF +F ++ E N++ GT
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
+K N+LLDE KISDF +F ++ E N++ GT
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
+K N+LLDE KISDF +F ++ E N++ GT
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
+K N+LLDE KISDF +F ++ E N++ GT
Sbjct: 130 IKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Query: 1 LKASNILLDEDLKPKISDFDFVR-IFVKDDLEANTNRIVGTQ-----------SNNFNDV 48
L A N ++ ED KI DF R I+ D ++ + ++DV
Sbjct: 155 LAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV 214
Query: 49 CNYSVPQWLHPSWS---YKLWKDGKGIK-LMDPSLDDAHSSWKLLTCLQIALLCVQENPN 104
++ V W + + Y+ + + ++ +M+ L D + + ++ +C Q NP
Sbjct: 215 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPK 273
Query: 105 GRPSMLEVYSMLKNE 119
RPS LE+ S +K E
Sbjct: 274 MRPSFLEIISSIKEE 288
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Query: 1 LKASNILLDEDLKPKISDFDFVR-IFVKDDLEANTNRIVGTQ-----------SNNFNDV 48
L A N ++ ED KI DF R I+ D ++ + ++DV
Sbjct: 157 LAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV 216
Query: 49 CNYSVPQWLHPSWS---YKLWKDGKGIK-LMDPSLDDAHSSWKLLTCLQIALLCVQENPN 104
++ V W + + Y+ + + ++ +M+ L D + + ++ +C Q NP
Sbjct: 217 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPK 275
Query: 105 GRPSMLEVYSMLKNE 119
RPS LE+ S +K E
Sbjct: 276 MRPSFLEIISSIKEE 290
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 31.2 bits (69), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Query: 1 LKASNILLDEDLKPKISDFDFVR-IFVKDDLEANTNRIVGTQ-----------SNNFNDV 48
L A N ++ ED KI DF R I+ D ++ + ++DV
Sbjct: 158 LAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV 217
Query: 49 CNYSVPQWLHPSWS---YKLWKDGKGIK-LMDPSLDDAHSSWKLLTCLQIALLCVQENPN 104
++ V W + + Y+ + + ++ +M+ L D + + ++ +C Q NP
Sbjct: 218 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPK 276
Query: 105 GRPSMLEVYSMLKNE 119
RPS LE+ S +K E
Sbjct: 277 MRPSFLEIISSIKEE 291
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 31.2 bits (69), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Query: 1 LKASNILLDEDLKPKISDFDFVR-IFVKDDLEANTNRIVGTQ-----------SNNFNDV 48
L A N ++ ED KI DF R I+ D ++ + ++DV
Sbjct: 154 LAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV 213
Query: 49 CNYSVPQWLHPSWS---YKLWKDGKGIK-LMDPSLDDAHSSWKLLTCLQIALLCVQENPN 104
++ V W + + Y+ + + ++ +M+ L D + + ++ +C Q NP
Sbjct: 214 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPK 272
Query: 105 GRPSMLEVYSMLKNE 119
RPS LE+ S +K E
Sbjct: 273 MRPSFLEIISSIKEE 287
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 31.2 bits (69), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Query: 1 LKASNILLDEDLKPKISDFDFVR-IFVKDDLEANTNRIVGTQ-----------SNNFNDV 48
L A N + ED KI DF R I+ D ++ + ++DV
Sbjct: 151 LAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV 210
Query: 49 CNYSVPQWLHPSWS---YKLWKDGKGIK-LMDPSLDDAHSSWKLLTCLQIALLCVQENPN 104
++ V W + + Y+ + + ++ +M+ L D + + L++ +C Q NP
Sbjct: 211 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LLELMRMCWQYNPK 269
Query: 105 GRPSMLEVYSMLKNE 119
RPS LE+ S +K E
Sbjct: 270 MRPSFLEIISSIKEE 284
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 31.2 bits (69), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Query: 1 LKASNILLDEDLKPKISDFDFVR-IFVKDDLEANTNRIVGTQ-----------SNNFNDV 48
L A N ++ ED KI DF R I+ D ++ + ++DV
Sbjct: 186 LAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV 245
Query: 49 CNYSVPQWLHPSWS---YKLWKDGKGIK-LMDPSLDDAHSSWKLLTCLQIALLCVQENPN 104
++ V W + + Y+ + + ++ +M+ L D + + ++ +C Q NP
Sbjct: 246 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPK 304
Query: 105 GRPSMLEVYSMLKNE 119
RPS LE+ S +K E
Sbjct: 305 MRPSFLEIISSIKEE 319
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 31.2 bits (69), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Query: 1 LKASNILLDEDLKPKISDFDFVR-IFVKDDLEANTNRIVGTQ-----------SNNFNDV 48
L A N ++ ED KI DF R I+ D ++ + ++DV
Sbjct: 157 LAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV 216
Query: 49 CNYSVPQWLHPSWS---YKLWKDGKGIK-LMDPSLDDAHSSWKLLTCLQIALLCVQENPN 104
++ V W + + Y+ + + ++ +M+ L D + + ++ +C Q NP
Sbjct: 217 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPK 275
Query: 105 GRPSMLEVYSMLKNE 119
RPS LE+ S +K E
Sbjct: 276 MRPSFLEIISSIKEE 290
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 31.2 bits (69), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Query: 1 LKASNILLDEDLKPKISDFDFVR-IFVKDDLEANTNRIVGTQ-----------SNNFNDV 48
L A N ++ ED KI DF R I+ D ++ + ++DV
Sbjct: 151 LAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV 210
Query: 49 CNYSVPQWLHPSWS---YKLWKDGKGIK-LMDPSLDDAHSSWKLLTCLQIALLCVQENPN 104
++ V W + + Y+ + + ++ +M+ L D + + ++ +C Q NP
Sbjct: 211 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPK 269
Query: 105 GRPSMLEVYSMLKNE 119
RPS LE+ S +K E
Sbjct: 270 MRPSFLEIISSIKEE 284
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Query: 1 LKASNILLDEDLKPKISDFDFVR-IFVKDDLEANTNRIVGTQ-----------SNNFNDV 48
L A N ++ ED KI DF R I+ D ++ + ++DV
Sbjct: 164 LAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV 223
Query: 49 CNYSVPQWLHPSWS---YKLWKDGKGIK-LMDPSLDDAHSSWKLLTCLQIALLCVQENPN 104
++ V W + + Y+ + + ++ +M+ L D + + ++ +C Q NP
Sbjct: 224 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPK 282
Query: 105 GRPSMLEVYSMLKNE 119
RPS LE+ S +K E
Sbjct: 283 MRPSFLEIISSIKEE 297
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 28/141 (19%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRI---VGTQSNNFND----VCNYSV 53
+K SNILL+ + K++DF R FV ++ TN I + + NF+D + +Y
Sbjct: 135 MKPSNILLNAECHVKVADFGLSRSFV--NIRRVTNNIPLSINENTENFDDDQPILTDYVA 192
Query: 54 PQWLH-PSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTCLQIALLCVQENPNGRPSMLEV 112
+W P K KGI + W L C+ +LC + G +M ++
Sbjct: 193 TRWYRAPEILLGSTKYTKGIDM-----------WS-LGCILGEILCGKPIFPGSSTMNQL 240
Query: 113 YSML------KNENTADIMTP 127
++ NE+ I +P
Sbjct: 241 ERIIGVIDFPSNEDVESIQSP 261
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Query: 1 LKASNILLDEDLKPKISDFDFVR-IFVKDDLEANTNRIVGTQ-----------SNNFNDV 48
L A N ++ ED KI DF R I+ D ++ + ++DV
Sbjct: 164 LAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDV 223
Query: 49 CNYSVPQWLHPSWS---YKLWKDGKGIK-LMDPSLDDAHSSWKLLTCLQIALLCVQENPN 104
++ V W + + Y+ + + ++ +M+ L D + + ++ +C Q NP
Sbjct: 224 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDM-LFELMRMCWQYNPK 282
Query: 105 GRPSMLEVYSMLKNE 119
RPS LE+ S +K E
Sbjct: 283 MRPSFLEIISSIKEE 297
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 11/58 (18%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGTQSNNFNDVCNYSVPQWLH 58
LKA N+LLD D+ KI+DF F F VG + + F Y+ P+
Sbjct: 140 LKAENLLLDGDMNIKIADFGFSNEFT-----------VGNKLDTFCGSPPYAAPELFQ 186
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 24/144 (16%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVG-----------TQSNNF---N 46
L A NIL++ +L K+SDF R+ ++DD EA G Q F +
Sbjct: 171 LAARNILVNSNLVCKVSDFGLSRV-IEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSAS 229
Query: 47 DVCNYSVPQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTC----LQIALLCVQEN 102
DV +Y + W S+ + + D ++ ++++ + + C Q+ L C Q+
Sbjct: 230 DVWSYGIVMWEVMSYGERPYWDMSNQDVIK-AIEEGYRLPAPMDCPAGLHQLMLDCWQKE 288
Query: 103 PNGRPSMLEVYS----MLKNENTA 122
RP ++ M++N N+A
Sbjct: 289 RAERPKFEQIVGILDKMIRNPNSA 312
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 30.4 bits (67), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 63/150 (42%), Gaps = 24/150 (16%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVG------------TQSNNF--- 45
L A NIL++ +L K+SDF R D + +G Q F
Sbjct: 135 LAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSA 194
Query: 46 NDVCNYSVPQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTC----LQIALLCVQE 101
+DV +Y + W S+ + + D +++ +++ + + C Q+ L C Q+
Sbjct: 195 SDVWSYGIVMWEVMSYGERPYWDMTNQDVIN-AIEQDYRLPPPMDCPSALHQLMLDCWQK 253
Query: 102 NPNGRPSMLEVYS----MLKNENTADIMTP 127
+ N RP ++ + M++N N+ M P
Sbjct: 254 DRNHRPKFGQIVNTLDKMIRNPNSLKAMAP 283
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 30.4 bits (67), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 63/150 (42%), Gaps = 24/150 (16%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVG------------TQSNNF--- 45
L A NIL++ +L K+SDF R D + +G Q F
Sbjct: 161 LAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSA 220
Query: 46 NDVCNYSVPQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTC----LQIALLCVQE 101
+DV +Y + W S+ + + D +++ +++ + + C Q+ L C Q+
Sbjct: 221 SDVWSYGIVMWEVMSYGERPYWDMTNQDVIN-AIEQDYRLPPPMDCPSALHQLMLDCWQK 279
Query: 102 NPNGRPSMLEVYS----MLKNENTADIMTP 127
+ N RP ++ + M++N N+ M P
Sbjct: 280 DRNHRPKFGQIVNTLDKMIRNPNSLKAMAP 309
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 17/61 (27%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGTQSNNFNDVCN---YSVPQWL 57
LKA N+LLD D+ KI+DF F F T N ++ C Y+ P+
Sbjct: 139 LKAENLLLDADMNIKIADFGFSNEF--------------TFGNKLDEFCGSPPYAAPELF 184
Query: 58 H 58
Sbjct: 185 Q 185
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 1 LKASNILLDEDLKPKISDFDF 21
LKA N+LLD D+ KI+DF F
Sbjct: 139 LKAENLLLDADMNIKIADFGF 159
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 30.0 bits (66), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 1 LKASNILLDEDLKPKISDFDF 21
LKA N+LLD D+ KI+DF F
Sbjct: 139 LKAENLLLDADMNIKIADFGF 159
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 30.0 bits (66), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 1 LKASNILLDEDLKPKISDFDF 21
LKA N+LLD D+ KI+DF F
Sbjct: 139 LKAENLLLDADMNIKIADFGF 159
>pdb|1S3L|A Chain A, Structural And Functional Characterization Of A Novel
Archaeal Phosphodiesterase
pdb|1S3L|B Chain B, Structural And Functional Characterization Of A Novel
Archaeal Phosphodiesterase
pdb|1S3M|A Chain A, Structural And Functional Characterization Of A Novel
Archaeal Phosphodiesterase
pdb|1S3M|B Chain B, Structural And Functional Characterization Of A Novel
Archaeal Phosphodiesterase
pdb|1S3N|A Chain A, Structural And Functional Characterization Of A Novel
Archaeal Phosphodiesterase
pdb|1S3N|B Chain B, Structural And Functional Characterization Of A Novel
Archaeal Phosphodiesterase
Length = 190
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 2 KASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGTQSNNFNDVCNYSVPQWL 57
KA I DE+++ I DFV +FV + E I+ T NN + C + +WL
Sbjct: 43 KAIEIFNDENVETVIHCGDFVSLFVIKEFENLNANIIATYGNNDGERC--KLKEWL 96
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 1 LKASNILLDEDLKPKISDFDF 21
LKA N+LLD D+ KI+DF F
Sbjct: 139 LKAENLLLDADMNIKIADFGF 159
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 30.0 bits (66), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 1 LKASNILLDEDLKPKISDFDF 21
LKA N+LLD D+ KI+DF F
Sbjct: 132 LKAENLLLDADMNIKIADFGF 152
>pdb|2AHD|A Chain A, The Apo Structure Of Methanococcus Jannaschii
Phosphodiesterase Mj0936
pdb|2AHD|B Chain B, The Apo Structure Of Methanococcus Jannaschii
Phosphodiesterase Mj0936
pdb|2AHD|C Chain C, The Apo Structure Of Methanococcus Jannaschii
Phosphodiesterase Mj0936
pdb|2AHD|D Chain D, The Apo Structure Of Methanococcus Jannaschii
Phosphodiesterase Mj0936
Length = 165
Score = 30.0 bits (66), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 2 KASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGTQSNNFNDVCNYSVPQWL 57
KA I DE+++ I DFV +FV + E I+ T NN + C + +WL
Sbjct: 18 KAIEIFNDENVETVIHCGDFVSLFVIKEFENLNANIIATYGNNDGERC--KLKEWL 71
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 29.6 bits (65), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTN 35
L+A+NIL+ E+L K++DF R+ ++ A
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 29.6 bits (65), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTN 35
L+A+NIL+ E+L K++DF R+ ++ A
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 29.6 bits (65), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTN 35
L+A+NIL+ E+L K++DF R+ ++ A
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 29.6 bits (65), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEAN 33
L+A+NIL+ E+L K++DF R+ ++ A
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTAR 338
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 29.6 bits (65), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEAN 33
L+A+NIL+ E+L K++DF R+ ++ A
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTAR 338
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 29.6 bits (65), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEAN 33
L+A+NIL+ E+L K++DF R+ ++ A
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTAR 338
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTN 35
L+A+NIL+ E+L K++DF R+ ++ A
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTN 35
L+A+NIL+ E+L K++DF R+ ++ A
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 14/125 (11%)
Query: 1 LKASNILLDEDLKPKISDFDFVR---IFVKDDLEANTNRIVGTQSNNF------NDVCNY 51
L A NIL+ E+ KI+DF R ++VK + R + +S N+ +DV +Y
Sbjct: 158 LAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY 217
Query: 52 SVPQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTC----LQIALLCVQENPNGRP 107
V W S + +L + L + K L C + C +E P RP
Sbjct: 218 GVLLWEIVSLGGTPYCGMTCAELYE-KLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERP 276
Query: 108 SMLEV 112
S ++
Sbjct: 277 SFAQI 281
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTN 35
L+A+NIL+ E+L K++DF R+ ++ A
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 14/125 (11%)
Query: 1 LKASNILLDEDLKPKISDFDFVR---IFVKDDLEANTNRIVGTQSNNF------NDVCNY 51
L A NIL+ E+ KI+DF R ++VK + R + +S N+ +DV +Y
Sbjct: 168 LAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY 227
Query: 52 SVPQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTC----LQIALLCVQENPNGRP 107
V W S + +L + L + K L C + C +E P RP
Sbjct: 228 GVLLWEIVSLGGTPYCGMTCAELYE-KLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERP 286
Query: 108 SMLEV 112
S ++
Sbjct: 287 SFAQI 291
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 29.6 bits (65), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTN 35
L+A+NIL+ E+L K++DF R+ ++ A
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEYTARQG 171
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 29.3 bits (64), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTN 35
L+A+NIL+ E+L K++DF R+ ++ A
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEXTARQG 174
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 29.3 bits (64), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTN 35
L+A+NIL+ E+L K++DF R+ ++ A
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIEDNEYTARQG 163
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 29.3 bits (64), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 14/125 (11%)
Query: 1 LKASNILLDEDLKPKISDFDFVR---IFVKDDLEANTNRIVGTQSNNF------NDVCNY 51
L A NIL+ E+ KI+DF R ++VK + R + +S N+ +DV +Y
Sbjct: 165 LAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY 224
Query: 52 SVPQWLHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTC----LQIALLCVQENPNGRP 107
V W S + +L + L + K L C + C +E P RP
Sbjct: 225 GVLLWEIVSLGGTPYCGMTCAELYE-KLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERP 283
Query: 108 SMLEV 112
S ++
Sbjct: 284 SFAQI 288
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 29.3 bits (64), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTN 35
L+A+NIL+ E+L K++DF R+ ++ A
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIEDNEYTARQG 167
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 55/139 (39%), Gaps = 36/139 (25%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT---------------QSNNF 45
L A N L+D DL K+SDF R +V DD ++ VGT + ++
Sbjct: 130 LAARNCLVDRDLCVKVSDFGMTR-YVLDDQYVSS---VGTKFPVKWSAPEVFHYFKYSSK 185
Query: 46 NDVCNYSVPQWLHPSWS---YKLW-------KDGKGIKLMDPSLDDAHSSWKLLTCLQIA 95
+DV + + W S Y L+ K +G +L P L T QI
Sbjct: 186 SDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASD-------TIYQIM 238
Query: 96 LLCVQENPNGRPSMLEVYS 114
C E P RP+ ++ S
Sbjct: 239 YSCWHELPEKRPTFQQLLS 257
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTN 35
L+A+NIL+ E+L K++DF R+ ++ A
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIEDNEYTARQG 165
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTN 35
L+A+NIL+ E+L K++DF R+ ++ A
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIEDNEXTARQG 164
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 15/89 (16%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT--------QSNNF------N 46
L A N+LL KISDF + DD T R G + NF +
Sbjct: 136 LAARNVLLVNRHYAKISDFGLSKALGADD-SYYTARSAGKWPLKWYAPECINFRKFSSRS 194
Query: 47 DVCNYSVPQWLHPSWSYKLWKDGKGIKLM 75
DV +Y V W S+ K +K KG ++M
Sbjct: 195 DVWSYGVTMWEALSYGQKPYKKMKGPEVM 223
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 1 LKASNILLDEDLKPKISDF 19
+K+ NILLDE+ PKI+DF
Sbjct: 165 VKSINILLDENFVPKITDF 183
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 16/19 (84%)
Query: 1 LKASNILLDEDLKPKISDF 19
+K+ NILLDE+ PKI+DF
Sbjct: 165 VKSINILLDENFVPKITDF 183
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEAN 33
L+A+N+L+ E L KI+DF R+ ++ A
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVIEDNEYTAR 167
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 18/23 (78%)
Query: 97 LCVQENPNGRPSMLEVYSMLKNE 119
+C Q NPN RP+ LE+ ++LK++
Sbjct: 267 MCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 50/137 (36%), Gaps = 42/137 (30%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNR-----------IVGTQSNNFNDVC 49
L A N L+ E+ K+SDF R + D ++T ++ ++ +DV
Sbjct: 130 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 189
Query: 50 NYSVPQWLHPSWSYKLWKDGK-----------------GIKLMDPSLDDAHSSWKLLTCL 92
++ V W +++ +GK G +L P L H
Sbjct: 190 SFGVLMW-------EVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH-------VY 235
Query: 93 QIALLCVQENPNGRPSM 109
QI C +E P RP+
Sbjct: 236 QIMNHCWRERPEDRPAF 252
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 18/23 (78%)
Query: 97 LCVQENPNGRPSMLEVYSMLKNE 119
+C Q NPN RP+ LE+ ++LK++
Sbjct: 267 MCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 50/137 (36%), Gaps = 42/137 (30%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNR-----------IVGTQSNNFNDVC 49
L A N L+ E+ K+SDF R + D ++T ++ ++ +DV
Sbjct: 132 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 191
Query: 50 NYSVPQWLHPSWSYKLWKDGK-----------------GIKLMDPSLDDAHSSWKLLTCL 92
++ V W +++ +GK G +L P L H
Sbjct: 192 SFGVLMW-------EVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH-------VY 237
Query: 93 QIALLCVQENPNGRPSM 109
QI C +E P RP+
Sbjct: 238 QIMNHCWRERPEDRPAF 254
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 18/23 (78%)
Query: 97 LCVQENPNGRPSMLEVYSMLKNE 119
+C Q NPN RP+ LE+ ++LK++
Sbjct: 268 MCWQFNPNMRPTFLEIVNLLKDD 290
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 1 LKASNILLDEDLKPKISDFDF 21
LK NILLD+D+ K++DF F
Sbjct: 150 LKPENILLDDDMNIKLTDFGF 170
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 1 LKASNILLDEDLKPKISDFDF 21
LK NILLD+D+ K++DF F
Sbjct: 150 LKPENILLDDDMNIKLTDFGF 170
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTN 35
L+A+NIL+ E+L K++DF R+ ++ A
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEWTARQG 171
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 28.9 bits (63), Expect = 1.4, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 15/89 (16%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT--------QSNNF------N 46
L A N+LL KISDF + DD T R G + NF +
Sbjct: 462 LAARNVLLVNRHYAKISDFGLSKALGADD-SYYTARSAGKWPLKWYAPECINFRKFSSRS 520
Query: 47 DVCNYSVPQWLHPSWSYKLWKDGKGIKLM 75
DV +Y V W S+ K +K KG ++M
Sbjct: 521 DVWSYGVTMWEALSYGQKPYKKMKGPEVM 549
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 50/137 (36%), Gaps = 42/137 (30%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNR-----------IVGTQSNNFNDVC 49
L A N L+ E+ K+SDF R + D ++T ++ ++ +DV
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 50 NYSVPQWLHPSWSYKLWKDGK-----------------GIKLMDPSLDDAHSSWKLLTCL 92
++ V W +++ +GK G +L P L H
Sbjct: 189 SFGVLMW-------EVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH-------VY 234
Query: 93 QIALLCVQENPNGRPSM 109
QI C +E P RP+
Sbjct: 235 QIMNHCWKERPEDRPAF 251
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 1 LKASNILLDEDLKPKISDFDF 21
LK NILLD+D+ K++DF F
Sbjct: 137 LKPENILLDDDMNIKLTDFGF 157
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEAN 33
L+A+N+L+ E L KI+DF R+ ++ A
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVIEDNEYTAR 168
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 50/137 (36%), Gaps = 42/137 (30%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNR-----------IVGTQSNNFNDVC 49
L A N L+ E+ K+SDF R + D ++T ++ ++ +DV
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 186
Query: 50 NYSVPQWLHPSWSYKLWKDGK-----------------GIKLMDPSLDDAHSSWKLLTCL 92
++ V W +++ +GK G +L P L H
Sbjct: 187 SFGVLMW-------EVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH-------VY 232
Query: 93 QIALLCVQENPNGRPSM 109
QI C +E P RP+
Sbjct: 233 QIMNHCWKERPEDRPAF 249
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 1 LKASNILLDEDLKPKISDFDF 21
LKA N+LLD D KI+DF F
Sbjct: 139 LKAENLLLDADXNIKIADFGF 159
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGTQSNNFNDVCN--YSVPQWLH 58
LK SN+L++ + K+ DF RI D+ A+ + G QS V Y P+ +
Sbjct: 138 LKPSNLLINSNCDLKVCDFGLARII--DESAADNSEPTGQQSGMTEXVATRWYRAPEVML 195
Query: 59 PSWSYKLWKD 68
S Y D
Sbjct: 196 TSAKYSRAMD 205
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 50/137 (36%), Gaps = 42/137 (30%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNR-----------IVGTQSNNFNDVC 49
L A N L+ E+ K+SDF R + D ++T ++ ++ +DV
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 50 NYSVPQWLHPSWSYKLWKDGK-----------------GIKLMDPSLDDAHSSWKLLTCL 92
++ V W +++ +GK G +L P L H
Sbjct: 189 SFGVLMW-------EVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH-------VY 234
Query: 93 QIALLCVQENPNGRPSM 109
QI C +E P RP+
Sbjct: 235 QIMNHCWKERPEDRPAF 251
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTN 35
L A N+L+D +L K+SDF R+ D A T
Sbjct: 177 LAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTT 211
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEAN 33
L+A+NIL+ E+L K++DF R+ ++ A
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLIEDNEYTAR 339
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEAN 33
L A NIL++ +L K+SDF R+ ++DD EA
Sbjct: 173 LAARNILVNSNLVCKVSDFGLSRV-LEDDPEAT 204
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGTQSNNFNDVCN--YSVPQWLH 58
LK SN+L++ + K+ DF RI D+ A+ + G QS V Y P+ +
Sbjct: 138 LKPSNLLINSNCDLKVCDFGLARII--DESAADNSEPTGQQSGMVEFVATRWYRAPEVML 195
Query: 59 PSWSYKLWKD 68
S Y D
Sbjct: 196 TSAKYSRAMD 205
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 50/137 (36%), Gaps = 42/137 (30%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNR-----------IVGTQSNNFNDVC 49
L A N L+ E+ K+SDF R + D ++T ++ ++ +DV
Sbjct: 149 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 208
Query: 50 NYSVPQWLHPSWSYKLWKDGK-----------------GIKLMDPSLDDAHSSWKLLTCL 92
++ V W +++ +GK G +L P L H
Sbjct: 209 SFGVLMW-------EVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTH-------VY 254
Query: 93 QIALLCVQENPNGRPSM 109
QI C +E P RP+
Sbjct: 255 QIMNHCWKERPEDRPAF 271
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTN 35
L A+NIL+ E+L K++DF R+ ++ A
Sbjct: 140 LAAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEA 32
L A N+L+D +L K+SDF R+ ++DD +A
Sbjct: 177 LAARNVLVDSNLVCKVSDFGLSRV-LEDDPDA 207
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 28.1 bits (61), Expect = 2.4, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEA 32
L+A+NIL+ E+L K++DF R+ ++ A
Sbjct: 389 LRAANILVGENLVCKVADFGLARLIEDNEYTA 420
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK NILLD+D KI+DF + + D A TN GT
Sbjct: 145 LKLDNILLDKDGHIKIADFGMCKENMLGD--AKTNEFCGT 182
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGTQSNNFNDVCN--YSVPQWLH 58
LK SN+L++ + K+ DF RI D+ A+ + G QS V Y P+ +
Sbjct: 138 LKPSNLLINSNCDLKVCDFGLARII--DESAADNSEPTGQQSGMTEYVATRWYRAPEVML 195
Query: 59 PSWSYKLWKD 68
S Y D
Sbjct: 196 TSAKYSRAMD 205
>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph
Length = 353
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 61 WSYKLWKDGKGIKLMDPSLDDAHSSWKL 88
W K DG G++ +DP L D H S+ L
Sbjct: 105 WQTKAILDGNGLEKVDPQLVDGHLSYFL 132
>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent
Oxidoreductase From Mus Musculus At 2.10 A Resolution
Length = 363
Score = 27.7 bits (60), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 61 WSYKLWKDGKGIKLMDPSLDDAHSSWKL 88
W K DG G++ +DP L D H S+ L
Sbjct: 115 WQTKAILDGNGLEKVDPQLVDGHLSYFL 142
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 27.7 bits (60), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 1 LKASNILLDEDLKPKISDFDF 21
LK NILLD++++ ++SDF F
Sbjct: 226 LKPENILLDDNMQIRLSDFGF 246
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK NILLD+D KI+DF + + D A TN GT
Sbjct: 144 LKLDNILLDKDGHIKIADFGMCKENMLGD--AKTNXFCGT 181
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 1 LKASNILLDEDLKPKISDFDFVRI 24
LK++NI L EDL KI DF +
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATV 155
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 1 LKASNILLDEDLKPKISDFDFVRI 24
LK++NI L EDL KI DF +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATV 153
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEAN 33
L+A+NIL+ + L KI+DF R+ ++ A
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLIEDNEYTAR 177
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 1 LKASNILLDEDLKPKISDFDFVRI 24
LK++NI L EDL KI DF +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATV 158
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 1 LKASNILLDEDLKPKISDFDFVRI 24
LK++NI L EDL KI DF +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATV 158
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 1 LKASNILLDEDLKPKISDFDFVRI 24
LK++NI L EDL KI DF +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATV 153
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 1 LKASNILLDEDLKPKISDFDFVRI 24
LK++NI L EDL KI DF +
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATV 181
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 1 LKASNILLDEDLKPKISDFDFVRI 24
LK++NI L EDL KI DF +
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLATV 180
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEAN 33
L+A+NIL+ + L KI+DF R+ ++ A
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLIEDNEYTAR 163
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEAN 33
L+A+NIL+ + L KI+DF R+ ++ A
Sbjct: 143 LRAANILVSDTLSCKIADFGLARLIEDNEXTAR 175
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEAN 33
L+A+NIL+ + L KI+DF R+ ++ A
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEYTAR 173
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEAN 33
L+A+NIL+ + L KI+DF R+ ++ A
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEXTAR 173
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEAN 33
L+A+NIL+ + L KI+DF R+ ++ A
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLIEDNEYTAR 172
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEAN 33
L+A+NIL+ + L KI+DF R+ ++ A
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAR 167
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEAN 33
L+A+NIL+ + L KI+DF R+ ++ A
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEYTAR 167
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEAN 33
L+A+NIL+ + L KI+DF R+ ++ A
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLIEDNEXTAR 168
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEAN 33
L+A+NIL+ + L KI+DF R+ ++ A
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLIEDNEYTAR 162
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 27.3 bits (59), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEAN 33
L+A+NIL+ + L KI+DF R+ ++ A
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAR 167
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 27.3 bits (59), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEAN 33
L+A+NIL+ + L KI+DF R+ ++ A
Sbjct: 144 LRAANILVSDTLSCKIADFGLARLIEDNEXTAR 176
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 27.3 bits (59), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEAN 33
L+A+NIL+ + L KI+DF R+ ++ A
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLIEDNEXTAR 169
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 1 LKASNILLDEDLKPKISDFDFV 22
LK++NI L EDL KI DF
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLA 179
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 1 LKASNILLDEDLKPKISDFDFV 22
LK++NI L EDL KI DF
Sbjct: 150 LKSNNIFLHEDLTVKIGDFGLA 171
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 1 LKASNILLDEDLKPKISDFDF 21
LK++NI L EDL KI DF
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGL 150
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIF 25
L+A+NIL+ + L KI+DF R+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLI 159
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 26.9 bits (58), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANT 34
LK N++LD+D KI+DF + +KD T
Sbjct: 275 LKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT 308
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 26.9 bits (58), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 55/140 (39%), Gaps = 41/140 (29%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDD----------------LEANTNRIVGTQSNN 44
L A NIL+ E K KISDF R ++D +E+ + I TQS
Sbjct: 176 LAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQS-- 233
Query: 45 FNDVCNYSVPQW------------LHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTCL 92
DV ++ V W + P + L K G ++ D ++ +
Sbjct: 234 --DVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMY--------- 282
Query: 93 QIALLCVQENPNGRPSMLEV 112
++ L C ++ P+ RP ++
Sbjct: 283 RLMLQCWKQEPDKRPVFADI 302
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 26.9 bits (58), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANT 34
LK N++LD+D KI+DF + +KD T
Sbjct: 278 LKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT 311
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 26.9 bits (58), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 55/140 (39%), Gaps = 41/140 (29%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDD----------------LEANTNRIVGTQSNN 44
L A NIL+ E K KISDF R ++D +E+ + I TQS
Sbjct: 176 LAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQS-- 233
Query: 45 FNDVCNYSVPQW------------LHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTCL 92
DV ++ V W + P + L K G ++ D ++ +
Sbjct: 234 --DVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMY--------- 282
Query: 93 QIALLCVQENPNGRPSMLEV 112
++ L C ++ P+ RP ++
Sbjct: 283 RLMLQCWKQEPDKRPVFADI 302
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 26.9 bits (58), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 55/140 (39%), Gaps = 41/140 (29%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDD----------------LEANTNRIVGTQSNN 44
L A NIL+ E K KISDF R ++D +E+ + I TQS
Sbjct: 176 LAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQS-- 233
Query: 45 FNDVCNYSVPQW------------LHPSWSYKLWKDGKGIKLMDPSLDDAHSSWKLLTCL 92
DV ++ V W + P + L K G ++ D ++ +
Sbjct: 234 --DVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMY--------- 282
Query: 93 QIALLCVQENPNGRPSMLEV 112
++ L C ++ P+ RP ++
Sbjct: 283 RLMLQCWKQEPDKRPVFADI 302
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 26.9 bits (58), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK N++LD+D KI+DF + +KD A GT
Sbjct: 136 LKLENLMLDKDGHIKITDFGLCKEGIKDG--ATMKXFCGT 173
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 26.9 bits (58), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIF 25
LK N+LLDE L KI+DF I
Sbjct: 139 LKPENLLLDEHLNVKIADFGLSNIM 163
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK N++LD+D KI+DF + +KD A GT
Sbjct: 135 LKLENLMLDKDGHIKITDFGLCKEGIKDG--ATMKXFCGT 172
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIF 25
LK N+LLDE L KI+DF I
Sbjct: 138 LKPENLLLDEHLNVKIADFGLSNIM 162
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 26.6 bits (57), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIFVKDDLEANTNRIVGT 40
LK N++LD+D KI+DF + +KD A GT
Sbjct: 137 LKLENLMLDKDGHIKITDFGLCKEGIKDG--ATMKXFCGT 174
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 97 LCVQENPNGRPSMLEVYSMLKNE 119
+C Q NP RP+ LE+ ++LK++
Sbjct: 267 MCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 97 LCVQENPNGRPSMLEVYSMLKNE 119
+C Q NP RP+ LE+ ++LK++
Sbjct: 264 MCWQFNPKMRPTFLEIVNLLKDD 286
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 97 LCVQENPNGRPSMLEVYSMLKNE 119
+C Q NP RP+ LE+ ++LK++
Sbjct: 267 MCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 26.6 bits (57), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIF 25
LK N+LLDE L KI+DF I
Sbjct: 133 LKPENLLLDEHLNVKIADFGLSNIM 157
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 26.6 bits (57), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 97 LCVQENPNGRPSMLEVYSMLKNE 119
+C Q NP RP+ LE+ ++LK++
Sbjct: 267 MCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 26.6 bits (57), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 1 LKASNILLDEDLKPKISDFDFVRIF 25
LK N+LLDE L KI+DF I
Sbjct: 129 LKPENLLLDEHLNVKIADFGLSNIM 153
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 26.6 bits (57), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 97 LCVQENPNGRPSMLEVYSMLKNE 119
+C Q NP RP+ LE+ ++LK++
Sbjct: 266 MCWQFNPKMRPTFLEIVNLLKDD 288
>pdb|3CYM|A Chain A, Crystal Structure Of Protein Bad_0989 From
Bifidobacterium Adolescentis
Length = 440
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 47 DVCNYSVPQWLHPSWSYKLWKDGKGIKLMDP-SLDDAHSSW 86
D S ++ H W + +DG GI L+DP +L A + W
Sbjct: 44 DAERASGFRYGHEDWLVQFKRDGAGIGLLDPQALAAAGADW 84
>pdb|3BLW|A Chain A, Yeast Isocitrate Dehydrogenase With Citrate And Amp Bound
In The Regulatory Subunits
pdb|3BLW|C Chain C, Yeast Isocitrate Dehydrogenase With Citrate And Amp Bound
In The Regulatory Subunits
pdb|3BLW|E Chain E, Yeast Isocitrate Dehydrogenase With Citrate And Amp Bound
In The Regulatory Subunits
pdb|3BLW|G Chain G, Yeast Isocitrate Dehydrogenase With Citrate And Amp Bound
In The Regulatory Subunits
pdb|3BLW|I Chain I, Yeast Isocitrate Dehydrogenase With Citrate And Amp Bound
In The Regulatory Subunits
pdb|3BLW|K Chain K, Yeast Isocitrate Dehydrogenase With Citrate And Amp Bound
In The Regulatory Subunits
pdb|3BLW|M Chain M, Yeast Isocitrate Dehydrogenase With Citrate And Amp Bound
In The Regulatory Subunits
pdb|3BLW|O Chain O, Yeast Isocitrate Dehydrogenase With Citrate And Amp Bound
In The Regulatory Subunits
pdb|3BLX|A Chain A, Yeast Isocitrate Dehydrogenase (Apo Form)
pdb|3BLX|C Chain C, Yeast Isocitrate Dehydrogenase (Apo Form)
pdb|3BLX|E Chain E, Yeast Isocitrate Dehydrogenase (Apo Form)
pdb|3BLX|G Chain G, Yeast Isocitrate Dehydrogenase (Apo Form)
pdb|3BLX|I Chain I, Yeast Isocitrate Dehydrogenase (Apo Form)
pdb|3BLX|K Chain K, Yeast Isocitrate Dehydrogenase (Apo Form)
pdb|3BLX|M Chain M, Yeast Isocitrate Dehydrogenase (Apo Form)
pdb|3BLX|O Chain O, Yeast Isocitrate Dehydrogenase (Apo Form)
Length = 349
Score = 26.2 bits (56), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 15/75 (20%)
Query: 65 LWKDGKGIKLMDPSLDDAHSSWKLLTCLQIALLCVQENPNGRPSMLEVYSMLKNENTADI 124
L+K KG+K P +D L+ ++EN G S LE S+ + +
Sbjct: 109 LFKSLKGVKTRIPDID---------------LIVIRENTEGEFSGLEHESVPGVVESLKV 153
Query: 125 MTPKKLETFSKKAYE 139
MT K E ++ A++
Sbjct: 154 MTRPKTERIARFAFD 168
>pdb|2P38|A Chain A, Crystal Structure Of Pyrococcus Abyssi Protein Homologue
Of Saccharomyces Cerevisiae Nip7p
pdb|2P38|B Chain B, Crystal Structure Of Pyrococcus Abyssi Protein Homologue
Of Saccharomyces Cerevisiae Nip7p
Length = 166
Score = 26.2 bits (56), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 110 LEVYSMLKNENTADIMTPKKLETFSKKAYEDEQLIYASSWQAAKFVISL 158
LE +S++K E I+ PK F+ ++ + WQ +K V+ L
Sbjct: 85 LEFFSLIKLEKNYVILGPKASFLFTTGKDAPKEAVREIKWQGSKRVVVL 133
>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
18beta-Glycyrrhetinic Acid
pdb|2VNA|A Chain A, Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (
Zadh1)
pdb|2W98|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
pdb|2W98|B Chain B, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
Length = 357
Score = 26.2 bits (56), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 61 WSYKLWKDGKGIKLMDPSLDDAHSSWKL 88
W K+ DG ++ +DP L D H S+ L
Sbjct: 104 WQTKVILDGNSLEKVDPQLVDGHLSYFL 131
>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And 15-Keto-Pge2
pdb|2ZB7|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph And Nicotinamide
pdb|2ZB8|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And Indomethacin
Length = 357
Score = 26.2 bits (56), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 61 WSYKLWKDGKGIKLMDPSLDDAHSSWKL 88
W K+ DG ++ +DP L D H S+ L
Sbjct: 109 WQTKVILDGNSLEKVDPQLVDGHLSYFL 136
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.132 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,243,245
Number of Sequences: 62578
Number of extensions: 214654
Number of successful extensions: 1097
Number of sequences better than 100.0: 204
Number of HSP's better than 100.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 871
Number of HSP's gapped (non-prelim): 234
length of query: 162
length of database: 14,973,337
effective HSP length: 91
effective length of query: 71
effective length of database: 9,278,739
effective search space: 658790469
effective search space used: 658790469
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 47 (22.7 bits)