Query         046487
Match_columns 106
No_of_seqs    121 out of 626
Neff          5.0 
Searched_HMMs 13730
Date          Mon Mar 25 22:19:20 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046487.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/046487hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d2bkfa1 d.15.2.2 (A:1-85) Next  68.5     7.3 0.00053   23.8   5.7   52   47-100     7-67  (85)
  2 d1nn7a_ d.42.1.2 (A:) Potassiu  55.0    0.76 5.5E-05   28.8  -1.0   56   47-106     2-59  (105)
  3 d1y6ia2 a.261.1.1 (A:83-233) M  52.2    0.45 3.3E-05   32.5  -2.6   31   40-72    118-148 (151)
  4 d1unda_ a.14.1.1 (A:) Advillin  43.8       3 0.00022   21.9   0.5   18   64-81      1-18  (36)
  5 d1ip9a_ d.15.2.2 (A:) Bud emer  43.6      24  0.0017   20.7   4.9   47   49-99     17-72  (85)
  6 d1tjya_ c.93.1.1 (A:) AI-2 rec  40.9      15  0.0011   24.0   3.9   29   56-84      4-35  (316)
  7 d1z3xa2 a.261.1.1 (A:88-235) G  40.8    0.42 3.1E-05   32.5  -4.2   30   40-71    118-147 (148)
  8 d1t1da_ d.42.1.2 (A:) Shaker p  40.6     3.8 0.00028   25.2   0.7   56   47-106     3-61  (100)
  9 d1qusa_ d.2.1.6 (A:) 36 kDa so  31.9      14 0.00099   27.3   2.7   24   62-85     13-36  (322)
 10 d2nzug1 c.93.1.1 (G:58-332) Gl  26.0      76  0.0055   20.1   5.6   21   64-84     12-35  (275)
 11 d1dkgd1 c.55.1.1 (D:3-185) Hea  25.5      18  0.0013   23.1   2.2   53   44-100    96-149 (183)
 12 d1yu5x1 a.14.1.1 (X:10-76) Vil  24.5     9.2 0.00067   22.4   0.4   19   63-81     31-49  (67)
 13 d1pzqa_ a.34.3.1 (A:) Erythron  23.5      16  0.0012   20.8   1.3   16   12-27     34-49  (60)
 14 d1t2da2 d.162.1.1 (A:151-315)   22.2      62  0.0045   20.2   4.4   32   47-80    126-157 (165)
 15 d1mlaa1 c.19.1.1 (A:3-127,A:19  22.1      13 0.00096   25.2   0.9   20   65-84     22-41  (235)
 16 d1j26a_ d.50.4.1 (A:) Ict1 pro  21.9      48  0.0035   20.6   3.7   48   56-105    46-103 (112)
 17 d2al3a1 d.15.1.2 (A:10-85) Tet  21.2      67  0.0049   18.8   4.1   34   52-87      7-40  (76)
 18 d3d37a1 b.106.1.1 (A:6-178) Ba  20.6      31  0.0022   21.8   2.6   25   67-91    144-171 (173)
 19 d3buxb3 d.93.1.1 (B:264-351) C  20.1      40  0.0029   20.4   2.9   35   45-81     38-73  (88)

No 1  
>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.54  E-value=7.3  Score=23.83  Aligned_cols=52  Identities=10%  Similarity=0.162  Sum_probs=38.1

Q ss_pred             EEEEEcCcceEEEEeccCCCcHHHHHHHHHHHHhcCC--------cCCC-ceEeeCcHHHHHH
Q 046487           47 FAVYVGEHRSRYIVPISFLSHPEFQCLLRQAEEEFGF--------DHDM-GLTIPCEEVVFRS  100 (106)
Q Consensus        47 ~aVyVG~~~~RfvVp~~~L~hP~F~~LL~~aeeE~G~--------~~~G-~l~IpC~~~~Fe~  100 (106)
                      +-|..|++..||.++..  +++.|.+|..+-+.-||.        +.++ -++|.|+.+.=|.
T Consensus         7 vKvtf~~dt~RF~ls~~--~~~~~~~L~~~i~~rf~l~~~~lkY~Ddd~e~v~l~~d~dl~E~   67 (85)
T d2bkfa1           7 LNVTFKNEIQSFLVSDP--ENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYEEA   67 (85)
T ss_dssp             EEEEETTEEEEEEESCG--GGCCHHHHHHHHHHHHTCSSEEEEEECTTSCEEEECSHHHHHHH
T ss_pred             EEEEECCceEEEEecCC--CCCcHHHHHHHHHHhcCcccceEEEEcCCCCEEEEecHHHHHHH
Confidence            34455788899998533  367899999999988884        3344 5899999876554


No 2  
>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=55.03  E-value=0.76  Score=28.83  Aligned_cols=56  Identities=20%  Similarity=0.268  Sum_probs=37.1

Q ss_pred             EEEEEcCcceEEEEeccCC-CcHHHHHHHHHHH-HhcCCcCCCceEeeCcHHHHHHHHhhhC
Q 046487           47 FAVYVGEHRSRYIVPISFL-SHPEFQCLLRQAE-EEFGFDHDMGLTIPCEEVVFRSLTSMLR  106 (106)
Q Consensus        47 ~aVyVG~~~~RfvVp~~~L-~hP~F~~LL~~ae-eE~G~~~~G~l~IpC~~~~Fe~vl~~l~  106 (106)
                      +.+.||.  .+|.+..+-| ++|..  +|.... ..+--+.+|.+-|--+...|++||..+|
T Consensus         2 I~LNVGG--~~f~t~~~TL~~~p~s--~l~~~~~~~~~~~~~~~~FiDRdp~~F~~IL~ylR   59 (105)
T d1nn7a_           2 IVLNVSG--TRFQTWQDTLERYPDT--LLGSSERDFFYHPETQQYFFDRDPDIFRHILNFYR   59 (105)
T ss_dssp             EEEEETT--EEEEECHHHHHTSCSS--STTSGGGGGGEEGGGTEEEECSCTTTHHHHHHHHH
T ss_pred             EEEEECC--EEEEEeHHHHhcCCCC--CccccccccCcCCCCCcEEEeCCHHHHHHHHHHHh
Confidence            5677886  5899987755 45531  112222 2222245678999999999999998764


No 3  
>d1y6ia2 a.261.1.1 (A:83-233) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=52.20  E-value=0.45  Score=32.48  Aligned_cols=31  Identities=29%  Similarity=0.514  Sum_probs=19.6

Q ss_pred             ccCCCceEEEEEcCcceEEEEeccCCCcHHHHH
Q 046487           40 LDVPKGHFAVYVGEHRSRYIVPISFLSHPEFQC   72 (106)
Q Consensus        40 ~~vpkG~~aVyVG~~~~RfvVp~~~L~hP~F~~   72 (106)
                      .+.|+||+|+.- .-+- .-+--+.|+||.|.+
T Consensus       118 l~AP~GHLP~~~-~lrG-~~~~~~l~~h~~~~~  148 (151)
T d1y6ia2         118 LSAPQGHLPLLN-QLRG-VRVAESLYRHPVWSQ  148 (151)
T ss_dssp             TTSCTTCCSCCC-CTTC-THHHHHHHTSTHHHH
T ss_pred             CCCCCCCCCccc-hhhh-HHHHHHHHcCcchhh
Confidence            368999999854 2110 013345889999864


No 4  
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.78  E-value=3  Score=21.92  Aligned_cols=18  Identities=22%  Similarity=0.549  Sum_probs=16.2

Q ss_pred             CCCcHHHHHHHHHHHHhc
Q 046487           64 FLSHPEFQCLLRQAEEEF   81 (106)
Q Consensus        64 ~L~hP~F~~LL~~aeeE~   81 (106)
                      ||+.-.|++++.++.+||
T Consensus         1 yLsd~dF~~vFgmsr~eF   18 (36)
T d1unda_           1 YLSEQDFVSVFGITRGQF   18 (36)
T ss_dssp             CCCHHHHHHHHSSCHHHH
T ss_pred             CCCHHHHHHHHCcCHHHH
Confidence            788999999999999887


No 5  
>d1ip9a_ d.15.2.2 (A:) Bud emergence mediator Bemp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=43.62  E-value=24  Score=20.67  Aligned_cols=47  Identities=13%  Similarity=0.097  Sum_probs=34.3

Q ss_pred             EEEcCcceEEEEeccCCCcHHHHHHHHHHHHhcCC--------cCCC-ceEeeCcHHHHH
Q 046487           49 VYVGEHRSRYIVPISFLSHPEFQCLLRQAEEEFGF--------DHDM-GLTIPCEEVVFR   99 (106)
Q Consensus        49 VyVG~~~~RfvVp~~~L~hP~F~~LL~~aeeE~G~--------~~~G-~l~IpC~~~~Fe   99 (106)
                      |+.+++..||.||..    ..|.+|.++-++-|+-        +.+| .++|.|+.+.=+
T Consensus        17 v~~~~D~~~~~l~~~----it~~dL~~kI~~rf~~~~~~lkY~Dedgd~v~i~sD~Dl~~   72 (85)
T d1ip9a_          17 FYYKDDIFALMLKGD----TTYKELRSKIAPRIDTDNFKLQTKLFDGSGEEIKTDSQVSN   72 (85)
T ss_dssp             ECBTTCCEEEEECSC----CCHHHHHHHHHHHHTSSCEEEEECCSSSCCSCCCSHHHHHH
T ss_pred             EEECCcEEEEEeCCC----CCHHHHHHHHHHHhCCCceEEEEEcCCCCEEEEeCHHHHHH
Confidence            344788899999864    3488888888887762        3355 678899887644


No 6  
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=40.93  E-value=15  Score=24.05  Aligned_cols=29  Identities=17%  Similarity=0.115  Sum_probs=21.9

Q ss_pred             eEEEEeccCCCcHHHHHHHHHH---HHhcCCc
Q 046487           56 SRYIVPISFLSHPEFQCLLRQA---EEEFGFD   84 (106)
Q Consensus        56 ~RfvVp~~~L~hP~F~~LL~~a---eeE~G~~   84 (106)
                      +|..+=+..+++|.|..+.+-+   ++++|++
T Consensus         4 ~kI~~i~~~~~npf~~~~~~g~~~~a~~~G~~   35 (316)
T d1tjya_           4 ERIAFIPKLVGVGFFTSGGNGAQEAGKALGID   35 (316)
T ss_dssp             CEEEEECSSSSSHHHHHHHHHHHHHHHHHTCE
T ss_pred             CEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCE
Confidence            5677778889999999986554   4577864


No 7  
>d1z3xa2 a.261.1.1 (A:88-235) GUN4-like protein Ycf53 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=40.84  E-value=0.42  Score=32.50  Aligned_cols=30  Identities=27%  Similarity=0.510  Sum_probs=19.6

Q ss_pred             ccCCCceEEEEEcCcceEEEEeccCCCcHHHH
Q 046487           40 LDVPKGHFAVYVGEHRSRYIVPISFLSHPEFQ   71 (106)
Q Consensus        40 ~~vpkG~~aVyVG~~~~RfvVp~~~L~hP~F~   71 (106)
                      .+.|+||+|+.-  ..+-+-|--..|+||.|.
T Consensus       118 l~AP~GHLP~~~--~lrg~~~~~~~l~h~a~~  147 (148)
T d1z3xa2         118 LSAPRGHLPLTN--QLRGVQVLNALLNHPAWT  147 (148)
T ss_dssp             TTSCTTCCSCCC--CTTCSHHHHHHHTCGGGG
T ss_pred             CCCCCCCCCcCC--ccchHHHHHHHhcCcccc
Confidence            368999999743  223344455778888763


No 8  
>d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=40.56  E-value=3.8  Score=25.18  Aligned_cols=56  Identities=9%  Similarity=0.093  Sum_probs=36.2

Q ss_pred             EEEEEcCcceEEEEeccCCC-cH--HHHHHHHHHHHhcCCcCCCceEeeCcHHHHHHHHhhhC
Q 046487           47 FAVYVGEHRSRYIVPISFLS-HP--EFQCLLRQAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR  106 (106)
Q Consensus        47 ~aVyVG~~~~RfvVp~~~L~-hP--~F~~LL~~aeeE~G~~~~G~l~IpC~~~~Fe~vl~~l~  106 (106)
                      +.+.||.  ++|.++.+-|. +|  .+..|.....  +--+.+|.+-|--+...|++||+-+|
T Consensus         3 I~LNVGG--~~f~t~~~tL~~~p~s~l~~l~~~~~--~~~~~~g~~FiDRdp~~F~~IL~flR   61 (100)
T d1t1da_           3 VVINVSG--LRFETQLKTLNQFPDTLLGNPQKRNR--YYDPLRNEYFFDRNRPSFDAILYFYQ   61 (100)
T ss_dssp             EEEEETT--EEEEEEHHHHHTSTTSTTTCHHHHGG--GEETTTTEEEECSCSTTHHHHHHHHH
T ss_pred             EEEEECC--EEEEEeHHHHhhCCCchhHHHHhCCC--cCCCCCCeEEEecCHHHHHHHHHHHh
Confidence            4577886  58998855443 24  3333332211  11245678999999999999998663


No 9  
>d1qusa_ d.2.1.6 (A:) 36 kDa soluble lytic transglycosylase, SLT35 {Escherichia coli [TaxId: 562]}
Probab=31.87  E-value=14  Score=27.33  Aligned_cols=24  Identities=25%  Similarity=0.483  Sum_probs=21.6

Q ss_pred             ccCCCcHHHHHHHHHHHHhcCCcC
Q 046487           62 ISFLSHPEFQCLLRQAEEEFGFDH   85 (106)
Q Consensus        62 ~~~L~hP~F~~LL~~aeeE~G~~~   85 (106)
                      -+|.+||.+++++++..+++||+.
T Consensus        13 ~dya~~p~v~~Fi~~la~~~G~s~   36 (322)
T d1qusa_          13 GDFANNPNAQQFIDKMVNKHGFDR   36 (322)
T ss_dssp             STTTTCHHHHHHHHHHHHHHCCCH
T ss_pred             CCcccCHHHHHHHHHHHHHhCCCH
Confidence            478999999999999999999975


No 10 
>d2nzug1 c.93.1.1 (G:58-332) Glucose-resistance amylase regulator CcpA, C-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=25.97  E-value=76  Score=20.14  Aligned_cols=21  Identities=19%  Similarity=0.294  Sum_probs=15.5

Q ss_pred             CCCcHHHHHHHHHHHH---hcCCc
Q 046487           64 FLSHPEFQCLLRQAEE---EFGFD   84 (106)
Q Consensus        64 ~L~hP~F~~LL~~aee---E~G~~   84 (106)
                      .+++|.|.++++-.++   +.||+
T Consensus        12 ~l~~~f~~~~~~gi~~~~~~~g~~   35 (275)
T d2nzug1          12 DISNIFYAELARGIEDIATMYKYN   35 (275)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHTTCE
T ss_pred             CCCCHHHHHHHHHHHHHHHHcCCE
Confidence            5789999988877655   55663


No 11 
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]}
Probab=25.51  E-value=18  Score=23.10  Aligned_cols=53  Identities=17%  Similarity=0.106  Sum_probs=35.1

Q ss_pred             CceEEEEEcCcceEEEEeccCCCcHHHHHHHHHHHHhcCCcCCC-ceEeeCcHHHHHH
Q 046487           44 KGHFAVYVGEHRSRYIVPISFLSHPEFQCLLRQAEEEFGFDHDM-GLTIPCEEVVFRS  100 (106)
Q Consensus        44 kG~~aVyVG~~~~RfvVp~~~L~hP~F~~LL~~aeeE~G~~~~G-~l~IpC~~~~Fe~  100 (106)
                      .|-..+-++.  +.  ++.+-|---+++.|.+.|++.+|..-+. +|++|+.....++
T Consensus        96 ~~~~~~~~~~--~~--~s~~~l~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~~r  149 (183)
T d1dkgd1          96 NGDAWVEVKG--QK--MAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQR  149 (183)
T ss_dssp             SSBEEEEETT--EE--ECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHH
T ss_pred             CCcEEEEECC--EE--ECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHH
Confidence            3555454543  23  3445566677888889999888876655 6899987765543


No 12 
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=24.54  E-value=9.2  Score=22.43  Aligned_cols=19  Identities=21%  Similarity=0.502  Sum_probs=17.9

Q ss_pred             cCCCcHHHHHHHHHHHHhc
Q 046487           63 SFLSHPEFQCLLRQAEEEF   81 (106)
Q Consensus        63 ~~L~hP~F~~LL~~aeeE~   81 (106)
                      .||+.-.|++++.++.+||
T Consensus        31 ~yLsd~dF~~vFgms~~eF   49 (67)
T d1yu5x1          31 NHLSDEDFKAVFGMTRSAF   49 (67)
T ss_dssp             GGSCHHHHHHHHSSCHHHH
T ss_pred             hhCCHHHHHHHHCcCHHHH
Confidence            7999999999999999987


No 13 
>d1pzqa_ a.34.3.1 (A:) Erythronolide synthase {Saccharopolyspora erythraea [TaxId: 1836]}
Probab=23.46  E-value=16  Score=20.81  Aligned_cols=16  Identities=25%  Similarity=0.343  Sum_probs=13.3

Q ss_pred             hHHHHHHHhhhhcccc
Q 046487           12 AAVLKQILKRCSSLGK   27 (106)
Q Consensus        12 ~~~lk~~lkr~~S~~~   27 (106)
                      ..+|..+|+||.|...
T Consensus        34 g~rle~llrrw~srr~   49 (60)
T d1pzqa_          34 GQRLESLLRRWNSRRA   49 (60)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCC
Confidence            4689999999998764


No 14 
>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=22.24  E-value=62  Score=20.18  Aligned_cols=32  Identities=19%  Similarity=0.283  Sum_probs=23.4

Q ss_pred             EEEEEcCcceEEEEeccCCCcHHHHHHHHHHHHh
Q 046487           47 FAVYVGEHRSRYIVPISFLSHPEFQCLLRQAEEE   80 (106)
Q Consensus        47 ~aVyVG~~~~RfvVp~~~L~hP~F~~LL~~aeeE   80 (106)
                      +||-+|.+--.-++++. |+ +.=+++|++|++|
T Consensus       126 ~Pv~lg~~Gv~~i~~l~-L~-~~E~~~L~~s~~~  157 (165)
T d1t2da2         126 TPVVLGANGVEQVIELQ-LN-SEEKAKFDEAIAE  157 (165)
T ss_dssp             EEEEEETTEEEEECCCC-CC-HHHHHHHHHHHHH
T ss_pred             eeEEEcCCceEEEeCCC-CC-HHHHHHHHHHHHH
Confidence            46667875556678876 65 7788999988876


No 15 
>d1mlaa1 c.19.1.1 (A:3-127,A:198-307) Catalytic domain of malonyl-CoA ACP transacylase FabD {Escherichia coli [TaxId: 562]}
Probab=22.05  E-value=13  Score=25.21  Aligned_cols=20  Identities=25%  Similarity=0.423  Sum_probs=17.4

Q ss_pred             CCcHHHHHHHHHHHHhcCCc
Q 046487           65 LSHPEFQCLLRQAEEEFGFD   84 (106)
Q Consensus        65 L~hP~F~~LL~~aeeE~G~~   84 (106)
                      -++|.|++.++++.+.+|++
T Consensus        22 ~~~p~~r~~~~~~~~~l~~~   41 (235)
T d1mlaa1          22 ASYPIVEETFAEASAALGYD   41 (235)
T ss_dssp             HHCHHHHHHHHHHHHHHTSC
T ss_pred             HCCHHHHHHHHHHHHHhCCC
Confidence            46899999999999988864


No 16 
>d1j26a_ d.50.4.1 (A:) Ict1 protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.89  E-value=48  Score=20.57  Aligned_cols=48  Identities=13%  Similarity=0.288  Sum_probs=28.7

Q ss_pred             eEEEEecc-CCCcHHHHHHHHHHHHhcCCcCCCceEeeCcH---------HHHHHHHhhh
Q 046487           56 SRYIVPIS-FLSHPEFQCLLRQAEEEFGFDHDMGLTIPCEE---------VVFRSLTSML  105 (106)
Q Consensus        56 ~RfvVp~~-~L~hP~F~~LL~~aeeE~G~~~~G~l~IpC~~---------~~Fe~vl~~l  105 (106)
                      =||-|+.. ++.......|++.+..-  ...+|.|+|-|+.         +.|+.|..+|
T Consensus        46 Lr~~v~~s~~l~~~~~~~l~~~~~~~--i~~~g~l~I~s~~~RsQ~~Nr~~a~~kL~~li  103 (112)
T d1j26a_          46 VRFHLASADWIEEPVRQKIALTHKNK--INKAGELVLTSESSRYQFRNLAECLQKIRDMI  103 (112)
T ss_dssp             EEEEGGGCTTSCHHHHHHHHHHTTTT--BCSSSEEEEEECCCSSHHHHHHHHHHHHHHHH
T ss_pred             EEEeccccccCCHHHHHHHHHHhhhc--ccCCCeEEEEEcccCCHHHHHHHHHHHHHHHH
Confidence            36666543 55555555555544321  2456889999986         5666666665


No 17 
>d2al3a1 d.15.1.2 (A:10-85) Tether containing UBX domain for GLUT4 (Tug) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.20  E-value=67  Score=18.79  Aligned_cols=34  Identities=12%  Similarity=0.106  Sum_probs=25.4

Q ss_pred             cCcceEEEEeccCCCcHHHHHHHHHHHHhcCCcCCC
Q 046487           52 GEHRSRYIVPISFLSHPEFQCLLRQAEEEFGFDHDM   87 (106)
Q Consensus        52 G~~~~RfvVp~~~L~hP~F~~LL~~aeeE~G~~~~G   87 (106)
                      ...-+|..|++.-=.  ...+.|++|-+.|||+.+.
T Consensus         7 ~~~~rR~~VKvtP~t--~l~~VL~eaC~k~~~~~~~   40 (76)
T d2al3a1           7 APNGRRHTVKVTPST--VLLQVLEDTCRRQDFNPSE   40 (76)
T ss_dssp             CTTSCEEEECCCTTS--BHHHHHHHHHHHTTCCGGG
T ss_pred             CCCCcEEEEEeCCCc--CHHHHHHHHHHHhCCChhH
Confidence            344578888876533  6788999999999997643


No 18 
>d3d37a1 b.106.1.1 (A:6-178) Baseplate protein gpP {Neisseria meningitidis [TaxId: 487]}
Probab=20.59  E-value=31  Score=21.79  Aligned_cols=25  Identities=20%  Similarity=0.154  Sum_probs=14.8

Q ss_pred             cHHHHHHHHHHHHh---cCCcCCCceEe
Q 046487           67 HPEFQCLLRQAEEE---FGFDHDMGLTI   91 (106)
Q Consensus        67 hP~F~~LL~~aeeE---~G~~~~G~l~I   91 (106)
                      -..|.-|-+.|+++   |-|+++|.|+|
T Consensus       144 ETd~~fl~Rla~~~G~~~~~e~dG~Lv~  171 (173)
T d3d37a1         144 ETVWQALTHIANSVGLHPWLEPDGTLVV  171 (173)
T ss_dssp             CBHHHHHHHHHHHTTCEEEECTTSCEEE
T ss_pred             CCHHHHHHHHHHHCCCEEEECCCceEEe
Confidence            34555555555443   23788998876


No 19 
>d3buxb3 d.93.1.1 (B:264-351) Cbl {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.09  E-value=40  Score=20.43  Aligned_cols=35  Identities=31%  Similarity=0.500  Sum_probs=25.9

Q ss_pred             ceEEE-EEcCcceEEEEeccCCCcHHHHHHHHHHHHhc
Q 046487           45 GHFAV-YVGEHRSRYIVPISFLSHPEFQCLLRQAEEEF   81 (106)
Q Consensus        45 G~~aV-yVG~~~~RfvVp~~~L~hP~F~~LL~~aeeE~   81 (106)
                      |.-|+ ||-.+  .=++-+--.|.|++|+|++-++|-|
T Consensus        38 GQWAIGyvt~d--g~IlQTIp~nk~L~qaLidG~reGf   73 (88)
T d3buxb3          38 GQWAIGYVTAD--GNILQTIPHNKPLFQALIDGFREGF   73 (88)
T ss_dssp             TSEEEEEECTT--SCEEEECCSSCCHHHHHHHHHHHTS
T ss_pred             cceeeeeeccC--CceeeeccCccHHHHHHHhccccee
Confidence            55554 56543  3466777789999999999999865


Done!