BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046488
(480 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94II3|PMTL_ARATH Probable methyltransferase PMT21 OS=Arabidopsis thaliana GN=ERD3
PE=2 SV=1
Length = 600
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVP- 372
LIPE+ D G IR +D G ++ + + + VS AL +P
Sbjct: 184 LIPEMKD---GTIRTAIDTGCGVASWGGDLLDRGILTVSLAPRDNHEAQVQFALERGIPA 240
Query: 373 -LYITINQRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWI 425
L I QR+PF N+ D+ H +R L W +F L + R+LRPGG W+
Sbjct: 241 ILGIISTQRLPFPSNSFDMAHCSRCLIPWTEFG--GVYLLEVHRILRPGG-FWV 291
Score = 35.8 bits (81), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 44/101 (43%)
Query: 321 IKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQR 380
I +IR +D + G AA + + +++ + + A ++ RGL+ Y +
Sbjct: 443 IGSDKIRNVMDMNTAYGGLAAALVNDPLWVMNVVSSYAANTLPVVFDRGLIGTYHDWCEA 502
Query: 381 VPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGG 421
+ T DL+H + +++ + DR+LRP G
Sbjct: 503 FSTYPRTYDLLHVDGLFTSESQRCDMKYVMLEMDRILRPSG 543
>sp|Q9ZPH9|PMTF_ARATH Probable methyltransferase PMT15 OS=Arabidopsis thaliana
GN=At4g00750 PE=1 SV=1
Length = 633
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 92/240 (38%), Gaps = 33/240 (13%)
Query: 198 EYMDYDVGEICNDDWKLAQKLMVHGCDPLPRR----RCFSRAPQLYSRPFYINESMWKLP 253
E+ +Y E N ++ +++ P + RC AP YS PF + P
Sbjct: 102 EFSEYTPCEFVNRSLNFPRERLIYRERHCPEKHEIVRCRIPAPYGYSLPF-------RWP 154
Query: 254 DNRNVRW-SQYRCKNFTCLASNATHKGFFKCADCFNLTDHEMPRWIKNVDIDPITNLTAD 312
++R+V W + T N + K F PR AD
Sbjct: 155 ESRDVAWFANVPHTELTVEKKNQNWVRYEKDRFLFPGGGTMFPR-------------GAD 201
Query: 313 FLIPEV---LDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRG 369
I E+ +++K G IR +D G +F A + N+ +S AL
Sbjct: 202 AYIDEIGRLINLKDGSIRTAIDTGCGVASFGAYLMSRNIVTMSFAPRDTHEAQVQFALER 261
Query: 370 LVPLYITI--NQRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427
VP I + + R+PF D+ H +R L W + L + DRVLRPGG WI S
Sbjct: 262 GVPAIIGVLASIRLPFPARAFDIAHCSRCLIPWGQYN--GTYLIEVDRVLRPGG-YWILS 318
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
Query: 324 GEIRIGLDFSIGTGTFAARMRE-----FNVTLVSAIIN-LGAPFNEMIALRGLVPLYITI 377
G R LD + G FA+ + + NV V A +N LG +I RGL+ Y
Sbjct: 476 GRYRNFLDMNAHLGGFASALVDDPVWVMNVVPVEASVNTLG-----VIYERGLIGTYQNW 530
Query: 378 NQRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGG 421
+ + + T D IH + D ++ IL + DR+LRP G
Sbjct: 531 CEAMSTYPRTYDFIHADSVFSLYKDRCDMEDILLEMDRILRPKG 574
>sp|Q9C6S7|PMTK_ARATH Probable methyltransferase PMT20 OS=Arabidopsis thaliana
GN=At1g31850 PE=1 SV=1
Length = 603
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVP- 372
LIPE+ D G +R +D G ++ + + + +S AL +P
Sbjct: 190 LIPEMKD---GTVRTAIDTGCGVASWGGDLLDRGILSLSLAPRDNHEAQVQFALERGIPA 246
Query: 373 -LYITINQRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWI 425
L I QR+PF N D+ H +R L W +F L + R++RPGG W+
Sbjct: 247 ILGIISTQRLPFPSNAFDMAHCSRCLIPWTEFG--GIYLLEIHRIVRPGG-FWV 297
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 325 EIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFF 384
+IR +D + G F+A + E + +++ + + A ++ RGL+ Y + +
Sbjct: 453 KIRNVMDMNTVYGGFSAALIEDPIWVMNVVSSYSANSLPVVFDRGLIGTYHDWCEAFSTY 512
Query: 385 DNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWI--DSFF------------- 429
T DL+H + +IL + DR+LRP G + I S+F
Sbjct: 513 PRTYDLLHLDSLFTLESHRCEMKYILLEMDRILRPSGYVIIRESSYFMDAITTLAKGIRW 572
Query: 430 -CAKEDMNDYLEVFKMLKYKKHKW 452
C +E+ ++ K+L +K W
Sbjct: 573 SCRREETEYAVKSEKILVCQKKLW 596
>sp|O80844|PMTG_ARATH Probable methyltransferase PMT16 OS=Arabidopsis thaliana
GN=At2g45750 PE=3 SV=1
Length = 631
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 5/113 (4%)
Query: 315 IPEVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLY 374
I ++D+ G IR +D G +F A + N+T +S AL VP
Sbjct: 198 IGRLIDLSDGSIRTAIDTGCGVASFGAYLLSRNITTMSFAPRDTHEAQVQFALERGVPAM 257
Query: 375 ITI--NQRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWI 425
I I R+P+ DL H +R L W L + DRVLRPGG WI
Sbjct: 258 IGIMATIRLPYPSRAFDLAHCSRCLIPWGQND--GAYLMEVDRVLRPGG-YWI 307
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 11/104 (10%)
Query: 324 GEIRIGLDFSIGTGTFAARMRE-----FNVTLVSAIIN-LGAPFNEMIALRGLVPLYITI 377
G R +D + G FAA + + NV V A +N LG +I RGL+ Y
Sbjct: 469 GRYRNLVDMNAYLGGFAAALADDPVWVMNVVPVEAKLNTLG-----VIYERGLIGTYQNW 523
Query: 378 NQRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGG 421
+ + + T D IH + + IL + DR+LRPGG
Sbjct: 524 CEAMSTYPRTYDFIHADSVFTLYQGQCEPEEILLEMDRILRPGG 567
>sp|Q9SZX8|PMTH_ARATH Probable methyltransferase PMT17 OS=Arabidopsis thaliana
GN=At4g10440 PE=3 SV=1
Length = 633
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 311 ADFLIPEVLDIKP---GEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIAL 367
AD I ++ + P G IR +D G +F A + + ++ VS AL
Sbjct: 197 ADAYIDDIARLIPLTDGGIRTAIDTGCGVASFGAYLLKRDIMAVSFAPRDTHEAQVQFAL 256
Query: 368 RGLVPLYITI--NQRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWI 425
VP I I ++R+P+ DL H +R L W F L + DRVLRPGG WI
Sbjct: 257 ERGVPAIIGIMGSRRLPYPARAFDLAHCSRCLIPW--FKNDGLYLMEVDRVLRPGG-YWI 313
Score = 38.9 bits (89), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 4/134 (2%)
Query: 318 VLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAI-INLGAPFNEMIALRGLVPLYIT 376
V ++ G R +D + G FAA M ++ +++ + ++ +I RGL+ Y
Sbjct: 464 VPELSHGRFRNIMDMNAFLGGFAASMLKYPSWVMNVVPVDAEKQTLGVIYERGLIGTYQD 523
Query: 377 INQRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMN 436
+ + T D+IH + L IL + DR+LRP G + + E +N
Sbjct: 524 WCEGFSTYPRTYDMIHAGGLFSLYEHRCDLTLILLEMDRILRPEGTVVLRDNV---ETLN 580
Query: 437 DYLEVFKMLKYKKH 450
++ K +K+K
Sbjct: 581 KVEKIVKGMKWKSQ 594
>sp|Q9C884|PMTI_ARATH Probable methyltransferase PMT18 OS=Arabidopsis thaliana
GN=At1g33170 PE=2 SV=1
Length = 639
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 8/120 (6%)
Query: 311 ADFLIPEVLDIKP---GEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIAL 367
AD I ++ + P G IR +D G +F A + + ++ +S AL
Sbjct: 214 ADAYIDDIARLIPLTDGAIRTAIDTGCGVASFGAYLLKRDIVAMSFAPRDTHEAQVQFAL 273
Query: 368 RGLVPLYITI--NQRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWI 425
VP I I ++R+P+ DL H +R L W F L + DRVLRPGG WI
Sbjct: 274 ERGVPAIIGIMGSRRLPYPARAFDLAHCSRCLIPW--FQNDGLYLTEVDRVLRPGG-YWI 330
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 320 DIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAI-INLGAPFNEMIALRGLVPLYITIN 378
++ G R +D + G FAA M ++ +++ + ++ +I RG + Y
Sbjct: 484 ELSRGRFRNIMDMNAYLGGFAAAMMKYPSWVMNVVPVDAEKQTLGVIFERGFIGTYQDWC 543
Query: 379 QRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLL 423
+ + T DLIH + + + IL + DR+LRP G +
Sbjct: 544 EGFSTYPRTYDLIHAGGLFSIYENRCDVTLILLEMDRILRPEGTV 588
>sp|Q6NPR7|PMTO_ARATH Probable methyltransferase PMT24 OS=Arabidopsis thaliana
GN=At1g29470 PE=1 SV=1
Length = 770
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 111/274 (40%), Gaps = 21/274 (7%)
Query: 208 CNDDWKLAQKLMVHGCDPLPRRRCFSRAPQ-LYSRPFYINESMWKLPDNRNVRWSQYRCK 266
C D+W+ +KL R C +P+ L S P S+ K P +R W Y
Sbjct: 254 CLDNWQAIRKLHSTKHYEHRERHCPEESPRCLVSLPEGYKRSI-KWPKSREKIW--YTNI 310
Query: 267 NFTCLASNATHKGFFKCADCFNLTDHEMPRWIKNVDIDPITNLTADFLIPEVLDIKPGE- 325
T LA H+ + K + + LT KN + I DFL DI G
Sbjct: 311 PHTKLAEVKGHQNWVKMSGEY-LTFPGGGTQFKNGALHYI-----DFLQESYPDIAWGNR 364
Query: 326 IRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITI--NQRVPF 383
R+ LD G +F + + +V +S AL +P + +R+PF
Sbjct: 365 TRVILDVGCGVASFGGYLFDRDVLALSFAPKDEHEAQVQFALERGIPAMSNVMGTKRLPF 424
Query: 384 FDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGG-LLWIDS--FFCAKEDMNDYLE 440
+ DLIH R W + +L + +R LRPGG +W + + +ED+ +
Sbjct: 425 PGSVFDLIHCARCRVPW--HIEGGKLLLELNRALRPGGFFVWSATPVYRKTEEDVGIWKA 482
Query: 441 VFKMLKYKKHKWVVVPKRDKDDREVFFSAVLEKP 474
+ K+ K + + + KD+ +A+ +KP
Sbjct: 483 MSKLTKAMCWELMTI---KKDELNEVGAAIYQKP 513
>sp|Q8H118|PMT1_ARATH Probable methyltransferase PMT1 OS=Arabidopsis thaliana
GN=At3g23300 PE=1 SV=2
Length = 611
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 9/142 (6%)
Query: 324 GEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITI--NQRV 381
G +R LD G +F + + +S N AL +P Y+ + +R+
Sbjct: 209 GRLRTFLDVGCGVASFGGYLLASEIMTMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRL 268
Query: 382 PFFDNTLDLIHTTRFLDGWIDFVLLDFILY-DWDRVLRPGGLLWIDSFFCAKEDMNDYLE 440
P+ + +L H +R ID++ D IL + DRVLRPGG S +D D L
Sbjct: 269 PYPSRSFELAHCSRCR---IDWLQRDGILLLELDRVLRPGGYFAYSSPEAYAQDEED-LR 324
Query: 441 VFKMLK--YKKHKWVVVPKRDK 460
+++ + + W + KR++
Sbjct: 325 IWREMSALVGRMCWTIAAKRNQ 346
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 7/157 (4%)
Query: 312 DFLIPEVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLV 371
D L P+ I+ +R +D G+FAA ++E +V +++ + G ++I RGL+
Sbjct: 444 DLLSPK---IQSDTVRNIMDMKASMGSFAAALKEKDVWVMNVVPEDGPNTLKLIYDRGLM 500
Query: 372 PLYITINQRVPFFDNTLDLIHTTRFL-DGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFC 430
+ + + T DL+H + D + +L + DR+LRP G + I
Sbjct: 501 GAVHSWCEAFSTYPRTYDLLHAWDIISDIKKRGCSAEDLLLEMDRILRPSGFILIRDKQS 560
Query: 431 AKEDMNDYLEVFKMLKYKKHKWVVVPKRDKDDREVFF 467
+ + YL K L ++ + + D+D V
Sbjct: 561 VVDLVKKYL---KALHWEAVETKTASESDQDSDNVIL 594
>sp|Q9ZW75|PMTJ_ARATH Probable methyltransferase PMT19 OS=Arabidopsis thaliana
GN=At2g43200 PE=3 SV=1
Length = 611
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Query: 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNEMIALRGL-V 371
+I VL + G IR LD G +F A + + + T+ A ++ + RGL
Sbjct: 202 VILSVLPLASGSIRTVLDIGCGVASFGAFLLNYKILTMSIAPRDIHEAQVQFALERGLPA 261
Query: 372 PLYITINQRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427
L + ++P+ + D++H +R L W + L L + DRVLRP G W+ S
Sbjct: 262 MLGVLSTYKLPYPSRSFDMVHCSRCLVNWTSYDGL--YLMEVDRVLRPEG-YWVLS 314
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 324 GEIRIGLDFSIGTGTFAARMREFNVTLVSAI-INLGAPFNEMIALRGLVPLYITINQRVP 382
G+ R +D + G G FAA + ++ + +++ + +L ++ RGL+ Y+ + +
Sbjct: 465 GKYRNVIDMNAGLGGFAAALIKYPMWVMNVVPFDLKPNTLGVVYDRGLIGTYMNWCEALS 524
Query: 383 FFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFF 429
+ T DLIH ++D + IL + R+LRP G + I F
Sbjct: 525 TYPRTYDLIHANGVFSLYLDKCDIVDILLEMQRILRPEGAVIIRDRF 571
>sp|Q9LYN3|PMTM_ARATH Probable methyltransferase PMT22 OS=Arabidopsis thaliana
GN=At3g56080 PE=3 SV=1
Length = 610
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 325 EIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITI--NQRVP 382
++R+ LD G +F + + NV +S AL +P + + Q++P
Sbjct: 228 KVRVVLDVGCGVASFGGTLLDKNVITMSFAPKDEHEAQIQFALERGIPATLAVIGTQKLP 287
Query: 383 FFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLL 423
F DN D+IH R W + L + +RVLRPGG
Sbjct: 288 FPDNAYDVIHCARCRVHWHGYG--GRPLLELNRVLRPGGFF 326
Score = 36.6 bits (83), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%)
Query: 330 LDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFDNTLD 389
+D + G G FAA + + +++ I G I RGL+ +Y + + + D
Sbjct: 477 MDMNAGYGGFAAALINKPLWVMNVIPVEGEDTLSTIFDRGLIGIYHDWCESFNTYPRSYD 536
Query: 390 LIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLL 423
L+H++ L ++ + DR+LRPGG L
Sbjct: 537 LLHSSFLFTNLSQRCDLMEVVVEIDRILRPGGYL 570
>sp|Q93W95|PMTD_ARATH Probable methyltransferase PMT13 OS=Arabidopsis thaliana
GN=At4g00740 PE=1 SV=1
Length = 600
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 4/115 (3%)
Query: 315 IPEVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLY 374
+ + + + G +R LD G +F + + +S AL VP +
Sbjct: 192 LAQYIPLNGGTLRTALDMGCGVASFGGTLLSQGILALSFAPRDSHKSQIQFALERGVPAF 251
Query: 375 ITI--NQRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427
+ + +R+PF + DL+H +R L + + FI + DR+LRPGG L I
Sbjct: 252 VAMLGTRRLPFPAYSFDLMHCSRCLIPFTAYNATYFI--EVDRLLRPGGYLVISG 304
>sp|Q94EJ6|PMTE_ARATH Probable methyltransferase PMT14 OS=Arabidopsis thaliana
GN=At4g18030 PE=1 SV=1
Length = 621
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 8/120 (6%)
Query: 311 ADFLIPE---VLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIAL 367
AD I E V+ IK G +R LD G ++ A M + NV +S AL
Sbjct: 189 ADAYIEELASVIPIKDGSVRTALDTGCGVASWGAYMLKRNVLTMSFAPRDNHEAQVQFAL 248
Query: 368 RGLVPLYITINQRV--PFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWI 425
VP I + + P+ D+ +R L W L + DRVLRPGG W+
Sbjct: 249 ERGVPAIIAVLGSILLPYPARAFDMAQCSRCLIPWT--ANEGTYLMEVDRVLRPGG-YWV 305
Score = 41.2 bits (95), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 44/94 (46%)
Query: 330 LDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFDNTLD 389
+D + G G FAA + +++ I + ++ RGL+ +Y + + T D
Sbjct: 464 MDMNAGLGGFAAALESPKSWVMNVIPTINKNTLSVVYERGLIGIYHDWCEGFSTYPRTYD 523
Query: 390 LIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLL 423
IH + + L+ IL + DR+LRP G++
Sbjct: 524 FIHASGVFSLYQHSCKLEDILLETDRILRPEGIV 557
>sp|Q0WT31|PMTP_ARATH Probable methyltransferase PMT25 OS=Arabidopsis thaliana
GN=At2g34300 PE=1 SV=2
Length = 770
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 10/139 (7%)
Query: 326 IRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFN-EMIALRGLVPLYITINQRVPFF 384
+R +D G FAA +++ + +++ ++ + AP +I RGL +Y + +
Sbjct: 618 VRNVMDMRAVYGGFAAALKDLKLWVMN-VVPVDAPDTLPIIYERGLFGIYHDWCESFNTY 676
Query: 385 DNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKM 444
T DL+H L ++ + DR+LRP G F ++DM EV KM
Sbjct: 677 PRTYDLLHADHLFSTLRKRCNLVSVMAEIDRILRPQGT------FIIRDDMETLGEVEKM 730
Query: 445 LKYKKHKWVVVPKRDKDDR 463
+ K KW V + KD+
Sbjct: 731 V--KSMKWKVKMTQSKDNE 747
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 85/220 (38%), Gaps = 15/220 (6%)
Query: 208 CNDDWKLAQKLMVHGCDPLPRRRCFSRAPQ-LYSRPFYINESMWKLPDNRNVRWSQYRCK 266
C D+W+ +KL R C +P L S P S+ K P +R W Y
Sbjct: 254 CLDNWQAIKKLHTTMHYEHRERHCPEESPHCLVSLPDGYKRSI-KWPKSREKIW--YNNV 310
Query: 267 NFTCLASNATHKGFFKCADCFNLTDHEMPRWIKNVDIDPITNLTADFLIPEVLDIKPGE- 325
T LA H+ + K + +LT KN + I DF+ I G
Sbjct: 311 PHTKLAEIKGHQNWVKMSG-EHLTFPGGGTQFKNGALHYI-----DFIQQSHPAIAWGNR 364
Query: 326 IRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITI--NQRVPF 383
R+ LD G +F + E +V +S AL +P + + +R+PF
Sbjct: 365 TRVILDVGCGVASFGGYLFERDVLALSFAPKDEHEAQVQFALERGIPAMLNVMGTKRLPF 424
Query: 384 FDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLL 423
+ DLIH R W + +L + +R LRPGG
Sbjct: 425 PGSVFDLIHCARCRVPW--HIEGGKLLLELNRALRPGGFF 462
>sp|B9DFI7|PMT2_ARATH Probable methyltransferase PMT2 OS=Arabidopsis thaliana
GN=At1g26850 PE=1 SV=2
Length = 616
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Query: 315 IPEVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLY 374
+ V+ ++ G +R LD G ++ A + NV +S AL VP
Sbjct: 197 LASVIPMENGTVRTALDTGCGVASWGAYLWSRNVRAMSFAPRDSHEAQVQFALERGVPAV 256
Query: 375 ITI--NQRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWI 425
I + ++P+ D+ H +R L W L + DRVLRPGG WI
Sbjct: 257 IGVLGTIKLPYPTRAFDMAHCSRCLIPW--GANDGMYLMEVDRVLRPGG-YWI 306
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 324 GEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEM--IALRGLVPLYITINQRV 381
G R +D + G G FAA + + +++ + + A N + + RGL+ +Y +
Sbjct: 462 GRYRNIMDMNAGFGGFAAALESQKLWVMNVVPTI-AEKNRLGVVYERGLIGIYHDWCEAF 520
Query: 382 PFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEV 441
+ T DLIH + + D IL + DR+LRP G + I ++D++ ++V
Sbjct: 521 STYPRTYDLIHANHLFSLYKNKCNADDILLEMDRILRPEGAVII------RDDVDTLIKV 574
Query: 442 FKML 445
+++
Sbjct: 575 KRII 578
>sp|Q9SD39|PMTR_ARATH Probable methyltransferase PMT27 OS=Arabidopsis thaliana
GN=At3g51070 PE=3 SV=1
Length = 895
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 11/169 (6%)
Query: 312 DFLIPEVLDIKPGE-IRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGL 370
DFL + +I G+ R+ LD G +F + E +V +S AL
Sbjct: 481 DFLQQSLKNIAWGKRTRVILDVGCGVASFGGFLFERDVIAMSLAPKDEHEAQVQFALERK 540
Query: 371 VPLYITI--NQRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGG-LLWIDS 427
+P + ++R+PF DLIH R W + + +L + +R+LRPGG +W +
Sbjct: 541 IPAISAVMGSKRLPFPSRVFDLIHCARCRVPWHNEGGM--LLLELNRMLRPGGYFVWSAT 598
Query: 428 FFCAK--EDMNDYLEVFKMLKYKKHKWVVVPKRDKDDREVFFSAVLEKP 474
K ED+ + E+ + K + V + +KD +A+ +KP
Sbjct: 599 PVYQKLEEDVQIWKEMSALTKSLCWELVTI---NKDKLNGIGAAIYQKP 644
Score = 40.8 bits (94), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Query: 326 IRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFN-EMIALRGLVPLYITINQRVPFF 384
+R +D G FAA +++ V +++ ++N+ +P +I RGL +Y + +
Sbjct: 750 VRNVMDMRAVYGGFAAALKDLQVWVMN-VVNINSPDTLPIIYERGLFGIYHDWCESFSTY 808
Query: 385 DNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKM 444
+ DL+H L ++ + DR++RPGG L + +++ N EV M
Sbjct: 809 PRSYDLLHADHLFSKLRTRCNLVPVMAEVDRIVRPGGKLIV------RDESNVIREVENM 862
Query: 445 LK 446
LK
Sbjct: 863 LK 864
>sp|B1VEN4|UBIE_CORU7 Demethylmenaquinone methyltransferase OS=Corynebacterium
urealyticum (strain ATCC 43042 / DSM 7109) GN=ubiE PE=3
SV=1
Length = 230
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 49/114 (42%), Gaps = 16/114 (14%)
Query: 319 LDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGL----VPLY 374
LD+ PG+ LD + GTG + E V+A +LG LR VP+
Sbjct: 47 LDLAPGDKV--LDLAAGTGVSTEELAESGAYCVAADFSLGM-------LRAGSHRDVPMI 97
Query: 375 ITINQRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428
+PF DNT D + + L +DF L + RV +PGG L I F
Sbjct: 98 CADGLNLPFADNTFDAVTISYGLRNLVDF---RAGLREMARVTKPGGKLAIAEF 148
>sp|Q940J9|PMT8_ARATH Probable methyltransferase PMT8 OS=Arabidopsis thaliana
GN=At1g04430 PE=1 SV=1
Length = 623
Score = 40.8 bits (94), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 1/145 (0%)
Query: 321 IKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQR 380
+K +R +D G+FAA +++ +V +++ + G ++I RGL+ +
Sbjct: 455 VKSNTVRNIMDMKAHMGSFAAALKDKDVWVMNVVSPDGPNTLKLIYDRGLIGTNHNWCEA 514
Query: 381 VPFFDNTLDLIHT-TRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYL 439
+ T DL+H + F D + +L + DR+LRP G + I E + YL
Sbjct: 515 FSTYPRTYDLLHAWSIFSDIKSKGCSAEDLLIEMDRILRPTGFVIIRDKQSVVESIKKYL 574
Query: 440 EVFKMLKYKKHKWVVVPKRDKDDRE 464
+ K + D+D +
Sbjct: 575 QALHWETVASEKVNTSSELDQDSED 599
Score = 40.4 bits (93), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 9/142 (6%)
Query: 324 GEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITI--NQRV 381
G +R LD G +F A + ++ +S N AL +P Y+ + +R+
Sbjct: 214 GRLRTVLDVGCGVASFGAYLLASDIMTMSLAPNDVHQNQIQFALERGIPAYLGVLGTKRL 273
Query: 382 PFFDNTLDLIHTTRFLDGWIDFVLLD-FILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLE 440
P+ + + H +R ID++ D +L + DRVLRPGG S +D + L+
Sbjct: 274 PYPSRSFEFAHCSRCR---IDWLQRDGLLLLELDRVLRPGGYFAYSSPEAYAQD-EENLK 329
Query: 441 VFKMLK--YKKHKWVVVPKRDK 460
++K + ++ W + KR++
Sbjct: 330 IWKEMSALVERMCWRIAVKRNQ 351
>sp|Q93YV7|PMT3_ARATH Probable methyltransferase PMT3 OS=Arabidopsis thaliana
GN=At4g14360 PE=1 SV=1
Length = 608
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 9/142 (6%)
Query: 324 GEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITI--NQRV 381
G +R D G +F + ++ +S N AL +P + + +R+
Sbjct: 206 GRLRTVFDVGCGVASFGGYLLSSDILTMSLAPNDVHQNQIQFALERGIPASLGVLGTKRL 265
Query: 382 PFFDNTLDLIHTTRFLDGWIDFVLLDFILY-DWDRVLRPGGLLWIDSFFCAKEDMNDYLE 440
P+ + +L H +R ID++ D IL + DRVLRPGG S +D D L
Sbjct: 266 PYPSRSFELSHCSRCR---IDWLQRDGILLLELDRVLRPGGYFAYSSPEAYAQDEED-LR 321
Query: 441 VFKMLK--YKKHKWVVVPKRDK 460
+++ + ++ W + KR++
Sbjct: 322 IWREMSALVERMCWKIAAKRNQ 343
Score = 36.2 bits (82), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Query: 312 DFLIPEVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLV 371
D L P I+ +R +D G+FAA ++E +V +++ + G ++I RGL+
Sbjct: 441 DLLSPR---IESDTVRNIMDMKASMGSFAAALKEKDVWVMNVVPEDGPNTLKLIYDRGLM 497
Query: 372 PLYITINQRVPFFDNTLDLIHTTRFLDGWIDFVLLDF-ILYDWDRVLRPGGLLWI 425
+ + + T DL+H + + +L + DR+LRP G + I
Sbjct: 498 GAVHSWCEAFSTYPRTYDLLHAWDIISDIKKKGCSEVDLLLEMDRILRPSGFIII 552
>sp|Q8VZV7|PMT9_ARATH Probable methyltransferase PMT9 OS=Arabidopsis thaliana
GN=At5g14430 PE=1 SV=1
Length = 612
Score = 40.8 bits (94), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 12/144 (8%)
Query: 321 IKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQR 380
++ IR +D S G FAA + + +V +++ + +P ++I RGL+ +
Sbjct: 451 VQKNSIRNVMDMSSNLGGFAAALNDKDVWVMNVMPVQSSPRMKIIYDRGLIGATHDWCEA 510
Query: 381 VPFFDNTLDLIHT-TRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYL 439
+ T DLIH F + + +L + DR+LRP G + I D D +
Sbjct: 511 FDTYPRTFDLIHAWNTFTETQARGCSFEDLLIEMDRILRPEGFVII-------RDTTDNI 563
Query: 440 EVFK----MLKYKKHKWVVVPKRD 459
K +LK+ K PK D
Sbjct: 564 SYIKKYLTLLKWDKWSTETTPKGD 587
>sp|B2FUU6|UBIE_STRMK Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Stenotrophomonas maltophilia (strain K279a) GN=ubiE
PE=3 SV=1
Length = 253
Score = 38.9 bits (89), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 26/170 (15%)
Query: 321 IKPGEIRIGLDFSIGTGTFAARMRE---FNVTLVSAIINLG--APFNEMIALRGLVPL-- 373
+KPG+ R+ LD + GTG AA ++E ++V IN G + + + RGLV
Sbjct: 63 VKPGD-RV-LDLAGGTGDIAALLKERVGAEGSVVLGDINAGMLSVGRDRLTNRGLVLGLD 120
Query: 374 YITIN-QRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK 432
Y+ N + +PF DN+ DL+ T F G + D L + RVL+ GG + F
Sbjct: 121 YVQCNAEALPFLDNSFDLV-TIAF--GLRNVTDKDAGLREMYRVLKVGGQARVLEFSEVT 177
Query: 433 EDMNDYLEVFKMLKYKKHKWVVVPK------RDKDDREVFFSAVLEKPPR 476
D FK + Y H + ++PK D D + ++ + PP+
Sbjct: 178 ADW------FKPI-YDFHSFKILPKLGKLFANDSDSYQYLAESIRKHPPQ 220
>sp|Q9C9Q8|PMTT_ARATH Probable pectin methyltransferase QUA2 OS=Arabidopsis thaliana
GN=QUA2 PE=1 SV=2
Length = 684
Score = 38.9 bits (89), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 33/211 (15%)
Query: 223 CDPLPRRRCFSRAPQLYSRPFYINESMWKLPDNRNVRW-SQYRCKNFTCLASNATHKGFF 281
C P ++ C P Y P + P +++ W S + ++S + K
Sbjct: 180 CGPGSKQECLELPPVKYRVPL-------RWPTGKDIIWHSNVKITAQEVVSSGSITKRMM 232
Query: 282 KCADCFNLTDHEMPRWIKNVDIDPITNLTADF--LIPEVLDIK-----PGEIRIGLDFSI 334
D D I P+++ D+ I E++ IK +R LD
Sbjct: 233 MMED-----DQ-----ISFRSASPMSDEVEDYSHQIAEMIGIKKDNFIEAGVRTILDIGC 282
Query: 335 GTGTFAARMREFNVTLVSAIINLGAPFNEM-IALRGLVPLYIT--INQRVPFFDNTLDLI 391
G G+F A + + L I N A +++ + L +P I I++++P+ + D++
Sbjct: 283 GYGSFGAHLLSKQI-LTMCIANYEASGSQVQLTLERGLPAMIGSFISKQLPYPSLSFDML 341
Query: 392 HTTRFLDGWIDFVLLD-FILYDWDRVLRPGG 421
H R ID+ D +L + DRVL+PGG
Sbjct: 342 HCLRCG---IDWDQKDGLLLVEIDRVLKPGG 369
>sp|Q9LZA4|PMT7_ARATH Probable methyltransferase PMT7 OS=Arabidopsis thaliana
GN=At5g04060 PE=1 SV=1
Length = 600
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYIT 376
E++++ E+R +D + G FAA M + + +++ + I RGL Y
Sbjct: 442 ELMNVNKTEVRNVMDTNAFIGGFAAAMNSYPLWVMNVVPATMNDTLSGIYQRGLTGAYHD 501
Query: 377 INQRVPFFDNTLDLIHTTRFLDGWIDF---VLLDFILYDWDRVLRPGGLLWI 425
+ + T DL+H + + LL+ I+ + DR++RP G + I
Sbjct: 502 WCEPFSTYPRTYDLLHADHLFTHYKIYGEGCLLEDIMLEMDRIIRPQGFIII 553
>sp|Q9SIZ3|PMTN_ARATH Probable methyltransferase PMT23 OS=Arabidopsis thaliana
GN=At2g40280 PE=1 SV=2
Length = 589
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%)
Query: 326 IRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFD 385
+R +D + G G FAA + + +++ + ++ RGL+ +Y + V +
Sbjct: 446 VRNVMDMNAGFGGFAAALINLPLWVMNVVPVDKPDTLSVVYDRGLIGVYHDWCESVNTYP 505
Query: 386 NTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLL 423
T DL+H++ L + ++ + DR++RPGG L
Sbjct: 506 RTYDLLHSSFLLGDLTQRCEIVQVVAEIDRIVRPGGYL 543
Score = 36.6 bits (83), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
Query: 311 ADFLIPEVLDIKPGE-IRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRG 369
+F+ + IK G+ IR+ LD G +F + + +V +S AL
Sbjct: 189 VEFIEKALPSIKWGKNIRVVLDVGCGVASFGGSLLDKDVITMSFAPKDEHEAQIQFALER 248
Query: 370 LVPLYITI--NQRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLL 423
+P +++ Q++ F N DLIH R W L + +RVLRPGG
Sbjct: 249 GIPATLSVIGTQQLTFPSNAFDLIHCARCRVHWD--ADGGKPLLELNRVLRPGGFF 302
>sp|Q8L7V3|PMTQ_ARATH Probable methyltransferase PMT26 OS=Arabidopsis thaliana
GN=At5g64030 PE=1 SV=1
Length = 829
Score = 38.1 bits (87), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 319 LDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFN-EMIALRGLVPLYITI 377
L I +R +D G FAA +R+ V +++ ++ + +P +I RGL +Y
Sbjct: 670 LGINWASVRNVMDMRAVYGGFAAALRDLKVWVMN-VVPIDSPDTLAIIYERGLFGIYHDW 728
Query: 378 NQRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMND 437
+ + + DL+H L ++ + DRVLRP G L + ++D
Sbjct: 729 CESFSTYPRSYDLLHADHLFSKLKQRCNLTAVIAEVDRVLRPEGKLIV------RDDAET 782
Query: 438 YLEVFKMLKYKKHKWVV 454
+V M+ K KW V
Sbjct: 783 IQQVEGMV--KAMKWEV 797
Score = 35.8 bits (81), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 312 DFLIPEVLDIKPGE-IRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGL 370
DF+ V I G+ R+ LD G +F + + +V +S AL
Sbjct: 408 DFIQESVPAIAWGKRSRVVLDVGCGVASFGGFLFDRDVITMSLAPKDEHEAQVQFALERG 467
Query: 371 VPLYITI--NQRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428
+P + R+PF D++H R W + +L + +RVLRPGG +
Sbjct: 468 IPAISAVMGTTRLPFPGRVFDIVHCARCRVPW--HIEGGKLLLELNRVLRPGGFFVWSAT 525
Query: 429 FCAKEDMNDYLEVFKMLKY--KKHKWVVV 455
++ D +E++K + KK W +V
Sbjct: 526 PVYQKKTED-VEIWKAMSELIKKMCWELV 553
>sp|C3PKL1|UBIE_CORA7 Demethylmenaquinone methyltransferase OS=Corynebacterium
aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1)
GN=ubiE PE=3 SV=1
Length = 229
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGL--V 371
L E L+ +PGE LD + GT + + V+ +LG M+A V
Sbjct: 42 LTRERLNPQPGEKV--LDLAAGTAVSTEELSKSGAWCVACDFSLG-----MLAAGAERDV 94
Query: 372 PLYITINQRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428
P R+PF DNT D + + L DF + L + RV +PGG L + F
Sbjct: 95 PKVAGDGMRLPFADNTFDAVTISYGLRNIHDF---ELGLREMARVTKPGGRLAVAEF 148
>sp|Q84TJ0|PMT6_ARATH Probable methyltransferase PMT6 OS=Arabidopsis thaliana
GN=At3g10200 PE=2 SV=1
Length = 591
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 318 VLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITI 377
++++ E+R +D + G FAA M + V +++ + I RGL +
Sbjct: 432 LMNVNETEVRNVMDMNAFIGGFAAAMNSYPVWVMNIVPATMNDTLSGIFERGLNGAFHDW 491
Query: 378 NQRVPFFDNTLDLIHT----TRFLDGWIDFVLLDFILYDWDRVLRPGGLLWI 425
+ + T DL+H+ + + + D LL+ I+ + DR++RP G + I
Sbjct: 492 CEAFSTYPRTYDLVHSDHVFSHYNKSYGDGCLLEDIMLEMDRIVRPQGFVII 543
>sp|Q8GYW9|PMT4_ARATH Probable methyltransferase PMT4 OS=Arabidopsis thaliana
GN=At1g13860 PE=2 SV=2
Length = 603
Score = 36.6 bits (83), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 81/206 (39%), Gaps = 23/206 (11%)
Query: 230 RCFSRAPQLYSRPFYINESMWKLPDNRNVRWS-QYRCKNFTCLASNATHKGFFKCAD--- 285
RC R P+ Y P + P R++ W+ + L+S K +
Sbjct: 112 RCLVRPPRDYKIPL-------RWPVGRDIIWTGNVKITKDQFLSSGTMTKRLMLLEENQI 164
Query: 286 CFNLTDHEMPRWIKN--VDIDPITNLTADFLIPEVLDIKPGEIRIGLDFSIGTGTFAARM 343
F+ D + +K+ I + L +D P+ IR LD G G+F A +
Sbjct: 165 TFHSDDGLIFDGVKDYAFQIAEMIGLGSDTEFPQ------AGIRTVLDIGCGFGSFGAHL 218
Query: 344 REFNVTLVSAIINLGAPFNEMIALRGLVPLYIT--INQRVPFFDNTLDLIHTTRFLDGWI 401
NV + + +AL +P I ++++P+ + D++H + W
Sbjct: 219 VSLNVMPICIAEYETSGSQVQLALERGLPAMIGNFFSKQLPYPALSFDMVHCAQCGITWD 278
Query: 402 DFVLLDFILYDWDRVLRPGGLLWIDS 427
+ +L + DRVL+PGG + S
Sbjct: 279 --IKDAMLLLEVDRVLKPGGYFVLTS 302
>sp|C4LL93|UBIE_CORK4 Demethylmenaquinone methyltransferase OS=Corynebacterium
kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=ubiE
PE=3 SV=1
Length = 229
Score = 36.2 bits (82), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 10/111 (9%)
Query: 319 LDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGL-VPLYITI 377
LD KPGE + D + GTG A + + +V +LG + A R VPL
Sbjct: 47 LDPKPGEKVV--DLAAGTGVSTAELSKSGALVVGCDFSLGM----LKAGRHRNVPLVAGD 100
Query: 378 NQRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428
+PF DNT D T F G +F L + RV++PGG L + F
Sbjct: 101 GLNLPFADNTFD-AATISF--GLRNFGDTAAGLREIARVVKPGGRLTVCEF 148
>sp|Q2EMV9|PAR14_MOUSE Poly [ADP-ribose] polymerase 14 OS=Mus musculus GN=Parp14 PE=1 SV=3
Length = 1817
Score = 35.4 bits (80), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 54 NVDLKSEGRNG-SQVIRGTVQIVMEKIRKEMSDLRDLPMDSSSPASLLRHSAFLADI 109
N+ KSE G SQ IR ++ EK+R+E L++ S LL HS FL D+
Sbjct: 432 NIAGKSEDVQGMSQKIRELIESTTEKLRREEQSLKEKVAISPGKHYLLHHSGFLKDL 488
>sp|Q9FG39|PMTC_ARATH Probable methyltransferase PMT12 OS=Arabidopsis thaliana
GN=At5g06050 PE=2 SV=1
Length = 682
Score = 35.4 bits (80), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Query: 326 IRIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFN-EMIALRGLVPLYITINQRVPF 383
+R LD G G FAA + E V V +I + P +I RGL+ + +
Sbjct: 519 LRNVLDMRAGFGGFAAALAELKVDCWVLNVIPVSGPNTLPVIYDRGLLGVMHDWCEPFDT 578
Query: 384 FDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWI 425
+ T DL+H + ++ + DR+LRPGG ++I
Sbjct: 579 YPRTYDLLHAAGLFSIERKRCNMTTMMLEMDRILRPGGRVYI 620
>sp|O22285|PMTB_ARATH Probable methyltransferase PMT11 OS=Arabidopsis thaliana
GN=At2g39750 PE=2 SV=1
Length = 694
Score = 35.4 bits (80), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Query: 318 VLDIKPGEIRIGLDFSIGTGTFAARMREFNVTL-VSAIINLGAPFN-EMIALRGLVPLYI 375
L K ++R LD G G FAA + + + V +++ + P +I RGL+ +
Sbjct: 539 ALKWKKMKLRNVLDMRAGFGGFAAALNDHKLDCWVLSVVPVSGPNTLPVIYDRGLLGVMH 598
Query: 376 TINQRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWI-DSFFCAKED 434
+ + T D +H + + IL + DR+LRPGG +I DS +
Sbjct: 599 DWCEPFDTYPRTYDFLHASGLFSIERKRCEMSTILLEMDRILRPGGRAYIRDSI----DV 654
Query: 435 MNDYLEVFKMLKY 447
M++ E+ K + +
Sbjct: 655 MDEIQEITKAMGW 667
>sp|Q9V2P5|DGGGP_PYRAB Digeranylgeranylglyceryl phosphate synthase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB00300 PE=3 SV=2
Length = 277
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 12/133 (9%)
Query: 8 MKLGSFRGVHTSIFILGTFALLISIA----TLSKFYSIRSLLVADAFCNYNVDLKSEGRN 63
+ L F GV +F LG +AL A L ++ L+ A Y GR
Sbjct: 96 LALARFLGVEALLFALGAYALTFIYAWKLKPLPFIGNVAVALLTAATPIYGA--LGVGRV 153
Query: 64 GSQVIRGTVQIVMEKIRKEMSDLRDLPMDSSSPASLL------RHSAFLADILGLLESVQ 117
G ++ R+ M D+ D+ D A L R +A ++ I G+L +
Sbjct: 154 GLAGYLAICAFLVNVSREIMKDIEDIEGDMKMGAKTLPIIIGKRRAAMISSIFGVLTVIT 213
Query: 118 EYLPLNEGIGYWH 130
+LP+ GIG +
Sbjct: 214 SFLPVKVGIGLGY 226
>sp|Q8FSB3|UBIE_COREF Demethylmenaquinone methyltransferase OS=Corynebacterium efficiens
(strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC
100395) GN=ubiE PE=3 SV=2
Length = 230
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 19/141 (13%)
Query: 319 LDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGL--VPLYIT 376
LD+KPGE LD + GT + + V+ + G M+A VP+ +
Sbjct: 47 LDLKPGEKV--LDLAAGTAVSTVELAKSGAWCVACDFSQG-----MLAAGKHRNVPMVVG 99
Query: 377 INQRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMN 436
+PF DN+ D + + L DF L + RV +PGG L + F
Sbjct: 100 DGMTLPFADNSFDAVTISYGLRNIHDFRAG---LREMARVTKPGGRLTVAEF------ST 150
Query: 437 DYLEVFKMLKYKKHKWVVVPK 457
+ VF L YK++ ++PK
Sbjct: 151 PVIPVFGTL-YKEYLMRLLPK 170
>sp|Q9C6B9|PEAM3_ARATH Phosphoethanolamine N-methyltransferase 3 OS=Arabidopsis thaliana
GN=NMT3 PE=2 SV=2
Length = 490
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 5/114 (4%)
Query: 317 EVLDIKPGEIRIGLDFSIGTGTF-AARMREFNVTLVSAIINLGA-PFNEMIALRGLVPLY 374
++LD+KPG+ + + IG G F A + +V + +N+ + I L+ V
Sbjct: 275 DMLDLKPGQKVLDVGCGIGGGDFYMAENFDVDVVGIDLSVNMISFALEHAIGLKCSVEFE 334
Query: 375 ITINQRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428
+ + + DNT D+I++ + D L Y W L+PGG + I +
Sbjct: 335 VADCTKKEYPDNTFDVIYSRDTILHIQDKPALFRRFYKW---LKPGGKVLITDY 385
>sp|Q9TYP1|STRM1_CAEEL Sterol 4-C-methyltransferase strm-1 OS=Caenorhabditis elegans
GN=strm-1 PE=3 SV=2
Length = 334
Score = 33.5 bits (75), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 14/126 (11%)
Query: 330 LDFSIGTGTFAARMREFNVTLVSAII--NLGAPFNEMIALRGL---VPLYITINQRVPFF 384
LD G G + +F L I N NE A G+ + Q++PF
Sbjct: 100 LDIGCGIGGVMLDIADFGAKLTGVTIAPNEAEIGNEKFANMGISDRCKIVAADCQKMPFE 159
Query: 385 DNTLDL---IHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEV 441
D+T D+ I++ +++ LD ++ + RVL+PGG + + D E
Sbjct: 160 DSTFDVAYAIYSLKYIPN------LDKVMKEIQRVLKPGGKFIVYDLIKTNDYDKDNKEH 213
Query: 442 FKMLKY 447
+K L +
Sbjct: 214 YKTLHH 219
>sp|Q9C9Y4|FB136_ARATH F-box protein At3g08750 OS=Arabidopsis thaliana GN=At3g08750 PE=2
SV=1
Length = 369
Score = 33.1 bits (74), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 233 SRAPQLYSRPF-YINESMWKLPDNRNVRWSQYRCKNFTCLASNATHKGFFKCADCFNLTD 291
S+ L S PF I E ++K+P +R+ CK + L T K F +N D
Sbjct: 4 SKCLLLPSLPFELIEEILYKIPAESLIRFKS-TCKKWYNLI---TEKRFM-----YNHLD 54
Query: 292 HEMP-RWIKNVD---IDPITNLTADFLIP-EVLDIKP 323
H P R+I+ D IDP+T + +D LIP E D+ P
Sbjct: 55 HYSPERFIRTYDQQIIDPVTEILSDALIPDEFRDLYP 91
>sp|Q9NYK1|TLR7_HUMAN Toll-like receptor 7 OS=Homo sapiens GN=TLR7 PE=1 SV=1
Length = 1049
Score = 32.7 bits (73), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 288 NLTDHEMPRWIKNVDIDPITNLTADFLIPEVLDIK-----PGEIRIGLDFSIGTGTFAAR 342
N H PRW KN++ +L+ +FL E+ D K P I++ L F+ + A
Sbjct: 300 NSLQHVPPRWFKNINKLQELDLSQNFLAKEIGDAKFLHFLPSLIQLDLSFNFELQVYRAS 359
Query: 343 MREFNVTLVSAIINLGAPFNEMIALRGL 370
M NL F+ + +L+ L
Sbjct: 360 M------------NLSQAFSSLKSLKIL 375
>sp|Q1LRG9|UBIE_RALME Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 /
DSM 2839) GN=ubiE PE=3 SV=1
Length = 243
Score = 32.3 bits (72), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 368 RGLV-PLYITINQRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426
+G+V P+ + +R+PF DN DL+ T F G + D L + RV++PGG + +
Sbjct: 106 KGVVTPVALCDAERIPFPDNYFDLV-TVAF--GLRNMTHKDAALAEMRRVIKPGGKVMVL 162
Query: 427 SFFCAKEDMNDYLEVF 442
F + + + +V+
Sbjct: 163 EFSKVWKPLEKFYDVY 178
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.141 0.443
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 187,322,120
Number of Sequences: 539616
Number of extensions: 8192133
Number of successful extensions: 22144
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 22102
Number of HSP's gapped (non-prelim): 60
length of query: 480
length of database: 191,569,459
effective HSP length: 121
effective length of query: 359
effective length of database: 126,275,923
effective search space: 45333056357
effective search space used: 45333056357
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)