Query 046488
Match_columns 480
No_of_seqs 451 out of 2282
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 22:20:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046488.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046488hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3e23_A Uncharacterized protein 99.6 2.6E-15 9E-20 138.3 15.5 157 314-476 33-204 (211)
2 1vl5_A Unknown conserved prote 99.6 2.7E-15 9.2E-20 142.8 13.6 131 317-454 31-189 (260)
3 3pfg_A N-methyltransferase; N, 99.6 2.3E-15 8E-20 143.4 13.1 96 327-426 52-150 (263)
4 3dh0_A SAM dependent methyltra 99.6 4.4E-15 1.5E-19 137.0 14.0 148 317-476 31-195 (219)
5 3h2b_A SAM-dependent methyltra 99.6 5E-15 1.7E-19 135.3 13.2 127 327-456 43-183 (203)
6 2p7i_A Hypothetical protein; p 99.6 5.2E-15 1.8E-19 137.3 13.0 119 328-453 45-197 (250)
7 4hg2_A Methyltransferase type 99.6 5.6E-16 1.9E-20 151.3 6.4 97 327-429 41-137 (257)
8 1y8c_A S-adenosylmethionine-de 99.6 1.1E-14 3.8E-19 135.4 14.9 98 326-426 38-141 (246)
9 3cgg_A SAM-dependent methyltra 99.6 2.3E-14 7.7E-19 128.2 15.0 144 327-474 48-195 (195)
10 3ujc_A Phosphoethanolamine N-m 99.6 1.7E-14 5.7E-19 136.1 14.5 124 327-454 57-205 (266)
11 1xxl_A YCGJ protein; structura 99.6 1.8E-14 6.2E-19 136.1 14.7 132 315-453 13-172 (239)
12 3ofk_A Nodulation protein S; N 99.6 2.2E-14 7.6E-19 132.3 14.6 147 326-479 52-210 (216)
13 3sm3_A SAM-dependent methyltra 99.6 4.8E-14 1.6E-18 130.2 16.2 127 327-455 32-207 (235)
14 3dlc_A Putative S-adenosyl-L-m 99.6 1.4E-14 4.8E-19 132.2 11.9 121 328-453 46-201 (219)
15 3hnr_A Probable methyltransfer 99.6 6.6E-14 2.2E-18 129.2 16.5 140 327-478 47-216 (220)
16 1pjz_A Thiopurine S-methyltran 99.6 4E-15 1.4E-19 138.5 8.1 131 319-455 18-176 (203)
17 3dli_A Methyltransferase; PSI- 99.6 1.5E-14 5.1E-19 136.3 12.0 123 327-454 43-183 (240)
18 3l8d_A Methyltransferase; stru 99.6 2.6E-14 9.1E-19 133.4 13.5 121 327-453 55-198 (242)
19 2o57_A Putative sarcosine dime 99.6 2.6E-14 9E-19 138.5 13.9 128 320-454 79-233 (297)
20 3jwg_A HEN1, methyltransferase 99.6 5.9E-14 2E-18 129.9 15.6 145 327-476 31-212 (219)
21 3g5l_A Putative S-adenosylmeth 99.6 2.1E-14 7.3E-19 135.8 12.4 96 326-426 45-144 (253)
22 3bus_A REBM, methyltransferase 99.5 4.8E-14 1.6E-18 134.6 14.5 131 318-455 56-216 (273)
23 1nkv_A Hypothetical protein YJ 99.5 2.7E-14 9.2E-19 134.7 12.4 128 317-452 30-184 (256)
24 4gek_A TRNA (CMO5U34)-methyltr 99.5 4.6E-14 1.6E-18 137.8 14.4 100 321-427 68-178 (261)
25 3e8s_A Putative SAM dependent 99.5 6.6E-14 2.2E-18 128.4 14.3 122 327-454 54-208 (227)
26 2xvm_A Tellurite resistance pr 99.5 4.7E-14 1.6E-18 127.4 13.0 107 315-427 24-136 (199)
27 3i9f_A Putative type 11 methyl 99.5 3.2E-14 1.1E-18 126.5 11.6 123 319-453 13-146 (170)
28 3ou2_A SAM-dependent methyltra 99.5 6E-14 2E-18 128.4 13.5 128 321-455 44-205 (218)
29 2ex4_A Adrenal gland protein A 99.5 8E-14 2.7E-18 131.4 14.6 140 313-456 65-226 (241)
30 3bkw_A MLL3908 protein, S-aden 99.5 6.6E-14 2.3E-18 130.5 13.7 132 315-454 35-213 (243)
31 1xtp_A LMAJ004091AAA; SGPP, st 99.5 3.4E-14 1.2E-18 133.6 11.6 127 326-455 94-238 (254)
32 2a14_A Indolethylamine N-methy 99.5 4.1E-14 1.4E-18 136.4 12.2 149 326-476 56-262 (263)
33 3thr_A Glycine N-methyltransfe 99.5 6.5E-14 2.2E-18 135.2 13.5 108 315-426 49-174 (293)
34 3cc8_A Putative methyltransfer 99.5 1.5E-13 5.1E-18 126.2 15.0 123 326-454 33-184 (230)
35 3ccf_A Cyclopropane-fatty-acyl 99.5 9.7E-14 3.3E-18 133.8 14.3 130 317-454 51-209 (279)
36 2zfu_A Nucleomethylin, cerebra 99.5 1.3E-13 4.5E-18 127.2 14.4 136 314-476 58-193 (215)
37 4htf_A S-adenosylmethionine-de 99.5 5E-14 1.7E-18 136.0 12.0 124 327-455 70-232 (285)
38 3dtn_A Putative methyltransfer 99.5 5.2E-14 1.8E-18 131.3 11.7 99 326-428 45-149 (234)
39 3f4k_A Putative methyltransfer 99.5 6.6E-14 2.3E-18 132.1 12.4 121 327-453 48-194 (257)
40 3ege_A Putative methyltransfer 99.5 4.7E-14 1.6E-18 135.2 11.5 129 316-454 27-177 (261)
41 3kkz_A Uncharacterized protein 99.5 9.4E-14 3.2E-18 132.8 13.3 122 327-454 48-195 (267)
42 3vc1_A Geranyl diphosphate 2-C 99.5 1E-13 3.4E-18 136.5 13.5 122 327-454 119-268 (312)
43 2yqz_A Hypothetical protein TT 99.5 8.9E-14 3E-18 131.1 12.3 95 327-426 41-140 (263)
44 2p8j_A S-adenosylmethionine-de 99.5 1.7E-13 5.7E-18 125.3 12.9 147 327-476 25-206 (209)
45 3g2m_A PCZA361.24; SAM-depende 99.5 1.3E-13 4.3E-18 134.5 12.8 97 328-427 85-190 (299)
46 2i62_A Nicotinamide N-methyltr 99.5 9E-14 3.1E-18 131.3 11.3 150 326-477 57-264 (265)
47 3hem_A Cyclopropane-fatty-acyl 99.5 2.7E-13 9.3E-18 132.3 14.7 129 319-454 68-242 (302)
48 3lcc_A Putative methyl chlorid 99.5 1.9E-13 6.5E-18 128.1 12.9 126 327-456 68-208 (235)
49 3ocj_A Putative exported prote 99.5 1.1E-13 3.9E-18 135.7 11.7 140 327-475 120-305 (305)
50 1kpg_A CFA synthase;, cyclopro 99.5 2.5E-13 8.5E-18 131.0 13.6 127 320-454 61-227 (287)
51 1vlm_A SAM-dependent methyltra 99.5 4.8E-13 1.6E-17 124.5 14.7 119 327-455 49-188 (219)
52 3bxo_A N,N-dimethyltransferase 99.5 3.3E-13 1.1E-17 125.5 13.3 98 327-427 42-141 (239)
53 3gu3_A Methyltransferase; alph 99.5 2.5E-13 8.5E-18 131.9 12.8 105 314-427 13-126 (284)
54 3d2l_A SAM-dependent methyltra 99.5 5.3E-13 1.8E-17 124.4 14.4 96 327-426 35-136 (243)
55 2gb4_A Thiopurine S-methyltran 99.5 2.3E-13 7.8E-18 132.2 12.2 124 327-454 70-226 (252)
56 3mgg_A Methyltransferase; NYSG 99.5 2.1E-13 7.3E-18 130.5 11.6 122 327-453 39-196 (276)
57 3jwh_A HEN1; methyltransferase 99.5 4.3E-13 1.5E-17 124.2 12.8 96 327-426 31-140 (217)
58 4e2x_A TCAB9; kijanose, tetron 99.5 2.5E-13 8.4E-18 138.8 11.8 124 326-455 108-253 (416)
59 4fsd_A Arsenic methyltransfera 99.4 3.4E-13 1.2E-17 137.5 12.5 121 327-453 85-249 (383)
60 2kw5_A SLR1183 protein; struct 99.4 7.2E-13 2.5E-17 120.9 13.4 121 328-455 32-171 (202)
61 2p35_A Trans-aconitate 2-methy 99.4 5.7E-13 1.9E-17 125.6 13.0 95 327-427 35-132 (259)
62 2gs9_A Hypothetical protein TT 99.4 5.6E-13 1.9E-17 122.4 10.2 96 326-429 37-134 (211)
63 2fk8_A Methoxy mycolic acid sy 99.4 1.3E-12 4.5E-17 128.2 13.2 122 327-454 92-253 (318)
64 1zx0_A Guanidinoacetate N-meth 99.4 4.2E-13 1.4E-17 126.5 9.2 126 327-455 62-212 (236)
65 3g07_A 7SK snRNA methylphospha 99.4 3.3E-13 1.1E-17 132.4 8.3 149 326-479 47-292 (292)
66 3m70_A Tellurite resistance pr 99.4 1.3E-12 4.4E-17 126.2 11.9 97 327-427 122-223 (286)
67 2g72_A Phenylethanolamine N-me 99.4 6.3E-13 2.1E-17 129.0 9.4 129 326-456 72-257 (289)
68 3mti_A RRNA methylase; SAM-dep 99.4 2E-12 6.9E-17 116.6 11.9 128 327-456 24-170 (185)
69 2aot_A HMT, histamine N-methyl 99.4 2E-12 6.8E-17 126.0 12.7 122 326-452 53-218 (292)
70 3g5t_A Trans-aconitate 3-methy 99.4 7.3E-13 2.5E-17 129.1 9.0 95 326-426 37-148 (299)
71 2avn_A Ubiquinone/menaquinone 99.4 1.2E-12 4.2E-17 125.0 10.0 97 327-427 56-152 (260)
72 1ri5_A MRNA capping enzyme; me 99.4 2.3E-12 7.7E-17 123.7 11.4 99 327-427 66-174 (298)
73 3dp7_A SAM-dependent methyltra 99.3 4.6E-12 1.6E-16 128.0 12.7 122 326-452 180-339 (363)
74 1ej0_A FTSJ; methyltransferase 99.3 7.8E-12 2.7E-16 109.1 12.5 138 327-474 24-180 (180)
75 3bkx_A SAM-dependent methyltra 99.3 4.6E-12 1.6E-16 120.9 11.8 106 318-428 38-160 (275)
76 1ve3_A Hypothetical protein PH 99.3 5.9E-12 2E-16 116.1 10.9 97 327-426 40-141 (227)
77 2r3s_A Uncharacterized protein 99.3 1.5E-11 5.2E-16 121.0 14.1 126 326-454 166-322 (335)
78 2pxx_A Uncharacterized protein 99.3 3.1E-12 1.1E-16 116.5 8.4 101 327-429 44-161 (215)
79 1xdz_A Methyltransferase GIDB; 99.3 2.6E-11 9E-16 114.9 15.1 117 327-452 72-199 (240)
80 3hm2_A Precorrin-6Y C5,15-meth 99.3 2.3E-11 7.8E-16 108.0 13.5 125 317-454 19-152 (178)
81 3m33_A Uncharacterized protein 99.3 3.8E-12 1.3E-16 119.5 8.6 112 327-452 50-164 (226)
82 3grz_A L11 mtase, ribosomal pr 99.3 1.8E-11 6.3E-16 112.2 13.1 130 327-476 62-198 (205)
83 3e05_A Precorrin-6Y C5,15-meth 99.3 4.5E-11 1.5E-15 109.8 15.6 120 317-448 34-161 (204)
84 3orh_A Guanidinoacetate N-meth 99.3 8.5E-13 2.9E-17 125.9 4.0 118 327-450 62-205 (236)
85 1qzz_A RDMB, aclacinomycin-10- 99.3 1.7E-11 5.7E-16 122.9 13.1 123 326-454 183-338 (374)
86 1wzn_A SAM-dependent methyltra 99.3 9.5E-12 3.3E-16 117.2 10.2 98 326-426 42-144 (252)
87 3njr_A Precorrin-6Y methylase; 99.3 5.4E-11 1.8E-15 111.0 15.1 127 315-455 47-180 (204)
88 1l3i_A Precorrin-6Y methyltran 99.3 3.6E-11 1.2E-15 107.0 13.3 120 316-448 26-153 (192)
89 3dou_A Ribosomal RNA large sub 99.3 1.4E-11 4.9E-16 114.4 10.6 138 327-474 27-183 (191)
90 1dus_A MJ0882; hypothetical pr 99.3 4E-11 1.4E-15 106.9 13.0 127 317-451 46-178 (194)
91 1x19_A CRTF-related protein; m 99.3 3.7E-11 1.3E-15 120.5 14.1 125 326-454 191-347 (359)
92 3i53_A O-methyltransferase; CO 99.3 2.1E-11 7.2E-16 120.9 12.1 123 325-453 169-319 (332)
93 2vdw_A Vaccinia virus capping 99.3 3.9E-12 1.3E-16 126.6 6.3 98 327-426 50-168 (302)
94 3iv6_A Putative Zn-dependent a 99.3 2E-11 6.8E-16 120.2 11.1 104 317-426 39-147 (261)
95 1tw3_A COMT, carminomycin 4-O- 99.3 5E-11 1.7E-15 119.1 14.3 132 318-454 178-338 (360)
96 3lpm_A Putative methyltransfer 99.2 1E-10 3.4E-15 112.3 15.6 141 307-454 31-200 (259)
97 2plw_A Ribosomal RNA methyltra 99.2 4.2E-11 1.4E-15 109.1 12.2 138 321-470 20-194 (201)
98 3ggd_A SAM-dependent methyltra 99.2 9E-12 3.1E-16 117.1 7.9 101 327-430 58-166 (245)
99 4df3_A Fibrillarin-like rRNA/T 99.2 3.8E-11 1.3E-15 116.6 12.5 124 319-451 73-213 (233)
100 3eey_A Putative rRNA methylase 99.2 2.6E-11 8.8E-16 110.4 10.6 149 321-477 20-191 (197)
101 3lst_A CALO1 methyltransferase 99.2 7.3E-12 2.5E-16 125.6 7.5 122 326-454 185-335 (348)
102 3mcz_A O-methyltransferase; ad 99.2 4.9E-11 1.7E-15 118.8 13.3 140 326-475 180-350 (352)
103 3reo_A (ISO)eugenol O-methyltr 99.2 3.3E-11 1.1E-15 122.3 12.1 123 325-454 203-354 (368)
104 3q87_B N6 adenine specific DNA 99.2 7.5E-11 2.6E-15 106.6 12.9 118 327-454 25-148 (170)
105 2ld4_A Anamorsin; methyltransf 99.2 3.9E-11 1.3E-15 107.7 10.8 107 320-447 9-128 (176)
106 3hp7_A Hemolysin, putative; st 99.2 5.3E-11 1.8E-15 119.1 12.5 136 327-473 87-249 (291)
107 3evz_A Methyltransferase; NYSG 99.2 1.9E-10 6.6E-15 107.0 15.5 144 327-476 57-222 (230)
108 3gwz_A MMCR; methyltransferase 99.2 1.1E-10 3.6E-15 118.3 14.7 123 326-454 203-355 (369)
109 3htx_A HEN1; HEN1, small RNA m 99.2 1.6E-10 5.5E-15 129.5 17.0 95 327-426 723-833 (950)
110 2ipx_A RRNA 2'-O-methyltransfe 99.2 4.1E-11 1.4E-15 112.7 10.2 120 327-452 79-214 (233)
111 1yzh_A TRNA (guanine-N(7)-)-me 99.2 1.1E-10 3.9E-15 108.2 13.1 122 327-451 43-178 (214)
112 2ip2_A Probable phenazine-spec 99.2 1.1E-10 3.7E-15 115.5 13.5 124 327-453 169-320 (334)
113 1nt2_A Fibrillarin-like PRE-rR 99.2 2.5E-11 8.5E-16 114.2 8.3 97 320-426 54-160 (210)
114 1fbn_A MJ fibrillarin homologu 99.2 1.7E-10 5.9E-15 108.6 14.0 117 327-453 76-211 (230)
115 3opn_A Putative hemolysin; str 99.2 8.8E-11 3E-15 112.8 11.8 132 327-474 39-202 (232)
116 3q7e_A Protein arginine N-meth 99.2 3.8E-11 1.3E-15 121.4 9.4 100 327-426 68-172 (349)
117 3p9c_A Caffeic acid O-methyltr 99.2 5.5E-11 1.9E-15 120.7 10.6 122 326-454 202-352 (364)
118 3g89_A Ribosomal RNA small sub 99.2 1.3E-10 4.3E-15 112.4 12.4 121 326-453 81-210 (249)
119 3bgv_A MRNA CAP guanine-N7 met 99.2 3.6E-11 1.2E-15 118.1 8.5 99 327-427 36-155 (313)
120 2pwy_A TRNA (adenine-N(1)-)-me 99.2 3.2E-10 1.1E-14 106.8 14.6 120 317-450 90-219 (258)
121 3mq2_A 16S rRNA methyltransfer 99.2 9.3E-11 3.2E-15 108.5 10.6 122 327-454 29-183 (218)
122 1fp1_D Isoliquiritigenin 2'-O- 99.2 2.4E-11 8.1E-16 122.9 7.0 121 326-454 210-359 (372)
123 2nyu_A Putative ribosomal RNA 99.2 1.7E-10 5.8E-15 104.4 11.4 142 321-474 20-189 (196)
124 2nxc_A L11 mtase, ribosomal pr 99.2 1.5E-10 5.1E-15 111.6 11.5 117 327-452 122-241 (254)
125 1fp2_A Isoflavone O-methyltran 99.1 8.4E-11 2.9E-15 117.8 9.7 122 326-454 189-340 (352)
126 2fca_A TRNA (guanine-N(7)-)-me 99.1 1.7E-10 5.8E-15 108.1 11.1 119 327-450 40-174 (213)
127 2fyt_A Protein arginine N-meth 99.1 9.6E-11 3.3E-15 118.1 10.0 99 327-425 66-169 (340)
128 2yxd_A Probable cobalt-precorr 99.1 4.6E-10 1.6E-14 99.3 13.2 118 317-450 29-152 (183)
129 4a6d_A Hydroxyindole O-methylt 99.1 5.4E-10 1.8E-14 112.9 14.5 121 325-452 179-331 (353)
130 1p91_A Ribosomal RNA large sub 99.1 8.7E-11 3E-15 112.1 8.2 90 327-428 87-179 (269)
131 3r0q_C Probable protein argini 99.1 1.4E-10 4.9E-15 118.3 10.1 99 327-426 65-168 (376)
132 3fpf_A Mtnas, putative unchara 99.1 1.1E-10 3.7E-15 117.3 9.0 100 318-427 117-222 (298)
133 4dzr_A Protein-(glutamine-N5) 99.1 5E-11 1.7E-15 108.2 5.8 121 327-451 32-188 (215)
134 3lbf_A Protein-L-isoaspartate 99.1 1.4E-10 4.8E-15 106.5 8.9 97 317-426 71-173 (210)
135 1ixk_A Methyltransferase; open 99.1 6.8E-10 2.3E-14 110.8 14.0 135 312-450 107-270 (315)
136 3uwp_A Histone-lysine N-methyl 99.1 7.2E-11 2.5E-15 123.8 6.9 108 318-431 168-292 (438)
137 3mb5_A SAM-dependent methyltra 99.1 3.6E-10 1.2E-14 107.0 10.8 122 315-451 85-218 (255)
138 1af7_A Chemotaxis receptor met 99.1 1.3E-10 4.6E-15 114.8 8.1 96 327-426 107-251 (274)
139 1yb2_A Hypothetical protein TA 99.1 3E-10 1E-14 110.1 10.4 119 318-451 105-233 (275)
140 1vbf_A 231AA long hypothetical 99.1 2.2E-10 7.4E-15 106.8 9.0 97 317-427 64-165 (231)
141 1g6q_1 HnRNP arginine N-methyl 99.1 1.7E-10 5.8E-15 115.5 8.8 99 327-425 40-143 (328)
142 3p9n_A Possible methyltransfer 99.1 2E-10 6.7E-15 104.4 8.2 100 327-428 46-154 (189)
143 3p2e_A 16S rRNA methylase; met 99.1 3E-10 1E-14 108.0 9.8 124 327-453 26-183 (225)
144 3gdh_A Trimethylguanosine synt 99.1 1.3E-11 4.3E-16 116.1 0.2 118 327-450 80-214 (241)
145 2qe6_A Uncharacterized protein 99.1 5.3E-10 1.8E-14 109.5 11.2 102 326-430 78-199 (274)
146 2oxt_A Nucleoside-2'-O-methylt 99.1 1.4E-10 4.8E-15 113.8 6.8 99 321-429 72-187 (265)
147 1zg3_A Isoflavanone 4'-O-methy 99.1 2.5E-10 8.5E-15 114.7 8.6 120 327-454 195-346 (358)
148 3u81_A Catechol O-methyltransf 99.0 9.7E-10 3.3E-14 102.6 11.6 155 314-477 49-218 (221)
149 1jsx_A Glucose-inhibited divis 99.0 1.1E-09 3.7E-14 100.1 11.6 110 327-451 67-184 (207)
150 1i9g_A Hypothetical protein RV 99.0 7.6E-10 2.6E-14 106.2 10.9 120 317-450 93-225 (280)
151 2wa2_A Non-structural protein 99.0 2.2E-10 7.5E-15 113.1 7.2 95 327-429 84-195 (276)
152 2y1w_A Histone-arginine methyl 99.0 4.5E-10 1.6E-14 113.3 9.4 98 327-426 52-154 (348)
153 3id6_C Fibrillarin-like rRNA/T 99.0 2E-09 6.8E-14 104.2 12.9 124 321-453 74-214 (232)
154 3tfw_A Putative O-methyltransf 99.0 2.5E-09 8.5E-14 102.4 13.1 107 314-428 54-171 (248)
155 3bwc_A Spermidine synthase; SA 99.0 1E-09 3.4E-14 109.0 10.6 122 326-451 96-236 (304)
156 2p41_A Type II methyltransfera 99.0 3.8E-10 1.3E-14 112.8 7.5 118 327-450 84-213 (305)
157 2b3t_A Protein methyltransfera 99.0 1.2E-09 4E-14 105.7 10.6 120 327-452 111-260 (276)
158 3dmg_A Probable ribosomal RNA 99.0 7.4E-10 2.5E-14 114.0 9.4 101 327-427 235-340 (381)
159 2frn_A Hypothetical protein PH 99.0 1.8E-09 6.1E-14 105.6 11.6 114 327-450 127-252 (278)
160 2ozv_A Hypothetical protein AT 99.0 6.1E-09 2.1E-13 100.7 15.1 127 316-451 29-190 (260)
161 3dxy_A TRNA (guanine-N(7)-)-me 99.0 3.1E-10 1.1E-14 107.5 5.8 97 327-426 36-149 (218)
162 1o54_A SAM-dependent O-methylt 99.0 2.2E-09 7.4E-14 103.8 11.4 120 317-451 106-235 (277)
163 3ckk_A TRNA (guanine-N(7)-)-me 99.0 7.3E-10 2.5E-14 106.2 7.7 115 327-446 48-185 (235)
164 3duw_A OMT, O-methyltransferas 99.0 2.3E-09 8E-14 99.4 10.3 107 314-428 49-168 (223)
165 1o9g_A RRNA methyltransferase; 99.0 1.1E-09 3.8E-14 104.1 8.1 111 313-426 38-213 (250)
166 3ntv_A MW1564 protein; rossman 98.9 2.8E-09 9.7E-14 100.7 10.8 106 314-427 62-176 (232)
167 2yxe_A Protein-L-isoaspartate 98.9 2E-09 6.8E-14 99.1 9.1 97 317-427 71-177 (215)
168 2ift_A Putative methylase HI07 98.9 9.9E-10 3.4E-14 101.8 7.0 95 327-427 55-163 (201)
169 1dl5_A Protein-L-isoaspartate 98.9 1E-09 3.5E-14 108.9 7.5 97 317-426 69-174 (317)
170 2yvl_A TRMI protein, hypotheti 98.9 7.1E-09 2.4E-13 97.1 12.8 119 317-450 85-210 (248)
171 3sso_A Methyltransferase; macr 98.9 3.4E-10 1.2E-14 118.3 4.2 94 326-428 217-325 (419)
172 2fhp_A Methylase, putative; al 98.9 8.3E-10 2.8E-14 98.7 5.8 95 327-427 46-154 (187)
173 2h00_A Methyltransferase 10 do 98.9 8.5E-10 2.9E-14 104.8 5.9 141 313-455 50-238 (254)
174 2esr_A Methyltransferase; stru 98.9 8.7E-10 3E-14 98.6 5.5 96 327-428 33-139 (177)
175 3tr6_A O-methyltransferase; ce 98.9 2.4E-09 8.3E-14 99.2 8.6 107 314-428 55-175 (225)
176 2bm8_A Cephalosporin hydroxyla 98.9 8.6E-10 2.9E-14 105.5 5.5 123 314-445 72-207 (236)
177 1ws6_A Methyltransferase; stru 98.9 9.2E-10 3.1E-14 96.8 4.9 95 327-428 43-148 (171)
178 3bzb_A Uncharacterized protein 98.9 7.1E-09 2.4E-13 101.3 11.5 119 327-450 81-232 (281)
179 4dcm_A Ribosomal RNA large sub 98.9 2.5E-09 8.7E-14 109.6 8.7 100 327-427 224-334 (375)
180 2xyq_A Putative 2'-O-methyl tr 98.9 1.3E-08 4.3E-13 101.7 13.3 132 320-470 60-209 (290)
181 2b25_A Hypothetical protein; s 98.9 7.8E-09 2.7E-13 102.9 11.5 113 317-443 99-233 (336)
182 1i1n_A Protein-L-isoaspartate 98.9 2.2E-09 7.7E-14 99.7 6.9 94 321-427 75-182 (226)
183 2yxl_A PH0851 protein, 450AA l 98.9 1.6E-08 5.5E-13 105.6 14.2 157 312-474 248-449 (450)
184 1sqg_A SUN protein, FMU protei 98.9 2.7E-08 9.4E-13 103.1 15.7 159 312-474 235-429 (429)
185 2gpy_A O-methyltransferase; st 98.9 1.6E-09 5.6E-14 101.5 5.9 105 314-428 45-161 (233)
186 1jg1_A PIMT;, protein-L-isoasp 98.9 2.6E-09 8.8E-14 100.7 6.7 97 317-427 85-189 (235)
187 2pjd_A Ribosomal RNA small sub 98.8 2.4E-09 8.1E-14 107.5 6.2 99 327-427 198-303 (343)
188 3c3p_A Methyltransferase; NP_9 98.8 3E-09 1E-13 98.2 6.4 92 327-427 58-160 (210)
189 2fpo_A Methylase YHHF; structu 98.8 3.4E-09 1.1E-13 98.3 6.6 95 327-427 56-160 (202)
190 2pbf_A Protein-L-isoaspartate 98.8 3.5E-09 1.2E-13 98.5 6.6 96 321-427 78-193 (227)
191 4azs_A Methyltransferase WBDD; 98.8 9.9E-10 3.4E-14 118.0 2.7 98 327-427 68-173 (569)
192 1g8a_A Fibrillarin-like PRE-rR 98.8 5.2E-09 1.8E-13 97.5 7.2 93 327-426 75-177 (227)
193 1ne2_A Hypothetical protein TA 98.8 1.7E-08 5.7E-13 92.3 10.5 107 327-446 53-162 (200)
194 3r3h_A O-methyltransferase, SA 98.8 1.1E-08 3.9E-13 98.0 9.7 107 314-428 51-171 (242)
195 3b3j_A Histone-arginine methyl 98.8 4.3E-09 1.5E-13 111.5 7.1 98 327-426 160-262 (480)
196 3ajd_A Putative methyltransfer 98.8 2.5E-08 8.6E-13 97.0 11.9 112 312-427 72-211 (274)
197 1r18_A Protein-L-isoaspartate( 98.8 9E-09 3.1E-13 96.3 7.8 93 321-427 82-194 (227)
198 3giw_A Protein of unknown func 98.8 8E-09 2.7E-13 102.8 7.8 105 325-431 78-204 (277)
199 4hc4_A Protein arginine N-meth 98.8 1.4E-08 4.7E-13 104.9 9.7 99 327-426 85-188 (376)
200 1wy7_A Hypothetical protein PH 98.8 2.1E-07 7.3E-12 85.0 16.6 112 327-449 51-169 (207)
201 1u2z_A Histone-lysine N-methyl 98.8 1.2E-08 4E-13 107.3 9.2 107 317-429 236-361 (433)
202 2vdv_E TRNA (guanine-N(7)-)-me 98.8 1E-08 3.4E-13 97.6 7.9 97 327-426 51-172 (246)
203 2hnk_A SAM-dependent O-methylt 98.8 1.8E-08 6.1E-13 95.1 9.4 106 314-427 51-181 (239)
204 3m6w_A RRNA methylase; rRNA me 98.8 3.3E-08 1.1E-12 104.7 12.0 158 312-475 90-301 (464)
205 3adn_A Spermidine synthase; am 98.7 1.3E-07 4.6E-12 93.9 15.4 119 326-450 84-222 (294)
206 3m4x_A NOL1/NOP2/SUN family pr 98.7 3.8E-08 1.3E-12 104.0 11.6 161 312-476 94-305 (456)
207 2igt_A SAM dependent methyltra 98.7 1.6E-08 5.4E-13 102.1 8.1 122 327-450 155-299 (332)
208 3fzg_A 16S rRNA methylase; met 98.7 3.4E-09 1.2E-13 100.9 2.9 95 327-427 51-152 (200)
209 3dr5_A Putative O-methyltransf 98.7 6.3E-09 2.2E-13 98.6 4.7 95 327-427 58-163 (221)
210 3tma_A Methyltransferase; thum 98.7 3E-08 1E-12 99.6 9.3 127 318-452 198-336 (354)
211 3a27_A TYW2, uncharacterized p 98.7 3.9E-08 1.3E-12 95.9 9.5 98 321-430 117-222 (272)
212 1sui_A Caffeoyl-COA O-methyltr 98.7 1E-08 3.6E-13 98.6 5.3 106 314-427 70-190 (247)
213 2frx_A Hypothetical protein YE 98.7 1.1E-07 3.7E-12 100.8 13.5 159 312-476 104-313 (479)
214 3cbg_A O-methyltransferase; cy 98.7 1.5E-08 5E-13 95.9 6.0 95 327-427 74-182 (232)
215 3tm4_A TRNA (guanine N2-)-meth 98.7 1.3E-07 4.5E-12 96.3 13.2 137 327-476 219-367 (373)
216 2qm3_A Predicted methyltransfe 98.7 5.3E-08 1.8E-12 99.1 10.1 116 327-449 174-303 (373)
217 1iy9_A Spermidine synthase; ro 98.7 5.1E-08 1.7E-12 95.5 9.0 120 326-450 76-213 (275)
218 2o07_A Spermidine synthase; st 98.6 3.6E-08 1.2E-12 98.2 7.5 120 326-450 96-233 (304)
219 3gjy_A Spermidine synthase; AP 98.6 1.7E-07 6E-12 94.7 12.6 119 327-450 91-223 (317)
220 3lec_A NADB-rossmann superfami 98.6 9.4E-08 3.2E-12 92.7 10.2 120 327-455 23-149 (230)
221 1inl_A Spermidine synthase; be 98.6 5.9E-08 2E-12 96.0 8.8 119 327-450 92-229 (296)
222 2avd_A Catechol-O-methyltransf 98.6 2E-08 6.9E-13 93.3 5.1 106 314-427 60-179 (229)
223 1xj5_A Spermidine synthase 1; 98.6 8.2E-08 2.8E-12 97.2 9.7 97 326-426 121-234 (334)
224 1mjf_A Spermidine synthase; sp 98.6 2.1E-07 7.1E-12 91.2 12.1 118 327-450 77-217 (281)
225 1uir_A Polyamine aminopropyltr 98.6 3.3E-08 1.1E-12 98.7 6.2 120 326-450 78-220 (314)
226 2pt6_A Spermidine synthase; tr 98.6 2.4E-07 8E-12 93.0 12.3 119 327-450 118-254 (321)
227 2b2c_A Spermidine synthase; be 98.6 5.2E-08 1.8E-12 97.8 7.2 120 326-450 109-246 (314)
228 3gnl_A Uncharacterized protein 98.6 1.2E-07 4.2E-12 92.7 9.5 120 327-455 23-149 (244)
229 3evf_A RNA-directed RNA polyme 98.6 1.2E-07 4.1E-12 94.4 9.6 145 321-469 72-224 (277)
230 2i7c_A Spermidine synthase; tr 98.6 1.2E-07 4.1E-12 93.2 8.7 120 326-450 79-216 (283)
231 3kr9_A SAM-dependent methyltra 98.6 2.1E-07 7.3E-12 89.8 10.1 119 327-455 17-143 (225)
232 3c3y_A Pfomt, O-methyltransfer 98.5 5.1E-08 1.7E-12 92.8 5.3 106 314-427 61-181 (237)
233 1zq9_A Probable dimethyladenos 98.5 1.9E-07 6.4E-12 91.9 8.4 100 317-424 22-144 (285)
234 2yx1_A Hypothetical protein MJ 98.5 2.9E-07 9.8E-12 92.6 9.8 115 327-455 197-317 (336)
235 2cmg_A Spermidine synthase; tr 98.5 1.5E-07 5.2E-12 92.0 6.6 87 326-426 73-170 (262)
236 1uwv_A 23S rRNA (uracil-5-)-me 98.4 2.3E-06 7.9E-11 88.9 15.1 133 327-473 288-431 (433)
237 2f8l_A Hypothetical protein LM 98.4 1.8E-06 6E-11 86.5 12.8 120 326-447 131-278 (344)
238 1nv8_A HEMK protein; class I a 98.4 4.3E-07 1.5E-11 89.4 8.0 95 327-427 125-249 (284)
239 1yub_A Ermam, rRNA methyltrans 98.4 6.6E-09 2.3E-13 99.3 -5.3 104 317-426 23-144 (245)
240 4dmg_A Putative uncharacterize 98.4 2.1E-06 7E-11 88.8 12.1 119 327-447 216-349 (393)
241 1qam_A ERMC' methyltransferase 98.3 3.7E-07 1.3E-11 87.7 5.8 61 327-389 32-97 (244)
242 2b78_A Hypothetical protein SM 98.3 1.3E-06 4.5E-11 89.5 10.0 122 327-448 214-355 (385)
243 2ih2_A Modification methylase 98.3 5.4E-06 1.8E-10 84.1 14.5 114 327-447 41-186 (421)
244 3k6r_A Putative transferase PH 98.3 1.3E-06 4.5E-11 86.6 9.0 119 321-449 123-251 (278)
245 2h1r_A Dimethyladenosine trans 98.3 1.4E-06 4.7E-11 86.3 8.6 98 317-422 36-154 (299)
246 2as0_A Hypothetical protein PH 98.3 9.9E-07 3.4E-11 90.1 7.6 102 327-428 219-336 (396)
247 3c0k_A UPF0064 protein YCCW; P 98.3 6.8E-07 2.3E-11 91.5 6.4 122 327-448 222-363 (396)
248 1wxx_A TT1595, hypothetical pr 98.3 8.9E-07 3.1E-11 90.3 6.8 121 327-447 211-348 (382)
249 2jjq_A Uncharacterized RNA met 98.2 2.6E-06 8.9E-11 88.9 8.9 105 312-426 279-386 (425)
250 3frh_A 16S rRNA methylase; met 98.2 2.9E-06 1E-10 83.4 8.4 107 314-426 96-205 (253)
251 3v97_A Ribosomal RNA large sub 98.2 8.2E-07 2.8E-11 98.2 4.4 116 327-448 541-675 (703)
252 3lcv_B Sisomicin-gentamicin re 98.1 2.2E-06 7.6E-11 85.3 5.9 108 314-426 122-235 (281)
253 3gru_A Dimethyladenosine trans 98.0 5.9E-06 2E-10 82.5 7.2 78 317-396 44-123 (295)
254 2b9e_A NOL1/NOP2/SUN domain fa 98.0 4.8E-05 1.6E-09 76.1 13.2 161 312-477 91-304 (309)
255 3b5i_A S-adenosyl-L-methionine 98.0 1.8E-05 6E-10 81.7 10.3 47 380-426 143-224 (374)
256 2okc_A Type I restriction enzy 98.0 1E-05 3.5E-10 84.1 8.1 110 314-426 162-306 (445)
257 3gcz_A Polyprotein; flavivirus 98.0 3.5E-06 1.2E-10 84.1 3.9 145 320-469 87-241 (282)
258 4auk_A Ribosomal RNA large sub 98.0 7.7E-05 2.6E-09 77.1 13.8 141 321-477 209-358 (375)
259 3bt7_A TRNA (uracil-5-)-methyl 97.9 3.9E-05 1.3E-09 77.8 10.4 115 327-453 215-349 (369)
260 2efj_A 3,7-dimethylxanthine me 97.9 8.4E-05 2.9E-09 77.0 12.5 49 378-427 140-225 (384)
261 2qfm_A Spermine synthase; sper 97.8 8.6E-05 3E-09 76.5 11.7 145 325-473 188-361 (364)
262 3eld_A Methyltransferase; flav 97.8 4.8E-05 1.7E-09 76.4 8.3 140 326-469 82-231 (300)
263 3tqs_A Ribosomal RNA small sub 97.7 5.7E-05 2E-09 73.6 7.7 73 317-394 23-103 (255)
264 3k0b_A Predicted N6-adenine-sp 97.7 5.1E-05 1.8E-09 78.3 7.2 99 327-426 203-349 (393)
265 3fut_A Dimethyladenosine trans 97.6 7.6E-05 2.6E-09 73.6 7.0 75 317-396 41-119 (271)
266 1m6e_X S-adenosyl-L-methionnin 97.6 8.1E-05 2.8E-09 76.5 7.5 48 378-426 130-208 (359)
267 3ldu_A Putative methylase; str 97.6 8.2E-05 2.8E-09 76.5 7.5 100 326-426 196-343 (385)
268 2r6z_A UPF0341 protein in RSP 97.6 4.7E-05 1.6E-09 74.2 4.9 83 314-399 74-173 (258)
269 2px2_A Genome polyprotein [con 97.6 0.00027 9.3E-09 69.9 10.1 138 321-469 71-223 (269)
270 3ldg_A Putative uncharacterize 97.6 0.00014 4.6E-09 75.1 8.4 98 327-426 196-342 (384)
271 2oyr_A UPF0341 protein YHIQ; a 97.5 5.8E-05 2E-09 74.0 3.7 104 313-421 76-194 (258)
272 3ftd_A Dimethyladenosine trans 97.4 0.0004 1.4E-08 67.2 8.7 65 317-386 25-93 (249)
273 2dul_A N(2),N(2)-dimethylguano 97.4 5.9E-05 2E-09 77.6 2.8 93 327-426 49-163 (378)
274 4gqb_A Protein arginine N-meth 97.3 0.0003 1E-08 77.2 6.7 98 325-424 357-464 (637)
275 2ar0_A M.ecoki, type I restric 97.3 0.0003 1E-08 75.5 6.6 107 314-426 160-311 (541)
276 3ua3_A Protein arginine N-meth 97.2 0.00033 1.1E-08 77.7 6.5 98 326-424 410-531 (745)
277 2qy6_A UPF0209 protein YFCK; s 97.2 0.00052 1.8E-08 67.0 7.1 57 387-450 173-230 (257)
278 3uzu_A Ribosomal RNA small sub 97.2 0.00027 9.2E-09 69.8 4.8 65 317-385 36-106 (279)
279 3v97_A Ribosomal RNA large sub 97.1 0.0009 3.1E-08 74.0 9.0 99 327-426 192-346 (703)
280 3cvo_A Methyltransferase-like 97.0 0.0028 9.7E-08 60.1 9.9 93 326-428 31-155 (202)
281 3axs_A Probable N(2),N(2)-dime 97.0 0.00042 1.4E-08 71.8 4.3 93 327-426 54-157 (392)
282 1m6y_A S-adenosyl-methyltransf 96.9 0.00051 1.7E-08 68.6 4.3 73 317-394 20-105 (301)
283 1qyr_A KSGA, high level kasuga 96.9 0.00051 1.7E-08 66.7 4.1 72 317-395 15-98 (252)
284 2wk1_A NOVP; transferase, O-me 96.9 0.002 6.7E-08 64.1 7.9 117 327-448 108-265 (282)
285 3lkz_A Non-structural protein 96.9 0.0031 1.1E-07 63.6 9.1 111 320-435 91-212 (321)
286 3khk_A Type I restriction-modi 96.9 0.002 6.9E-08 69.3 8.4 107 314-426 236-394 (544)
287 3lkd_A Type I restriction-modi 96.7 0.0042 1.4E-07 66.9 9.8 100 326-426 222-357 (542)
288 3o4f_A Spermidine synthase; am 96.6 0.022 7.6E-07 57.0 13.3 99 324-426 82-197 (294)
289 3ll7_A Putative methyltransfer 96.6 0.00081 2.8E-08 70.2 3.0 66 327-394 95-170 (410)
290 2k4m_A TR8_protein, UPF0146 pr 96.6 0.0034 1.2E-07 57.4 6.4 81 328-428 38-122 (153)
291 3p8z_A Mtase, non-structural p 96.2 0.061 2.1E-06 52.9 13.1 116 320-442 75-201 (267)
292 4fzv_A Putative methyltransfer 96.1 0.024 8.2E-07 58.1 10.7 113 311-427 136-284 (359)
293 3s1s_A Restriction endonucleas 96.1 0.021 7.1E-07 64.5 10.5 100 327-426 323-464 (878)
294 3r24_A NSP16, 2'-O-methyl tran 96.0 0.028 9.7E-07 56.8 10.0 133 327-474 111-259 (344)
295 3c6k_A Spermine synthase; sper 94.8 0.16 5.5E-06 52.5 11.3 120 325-450 205-354 (381)
296 2zig_A TTHA0409, putative modi 94.5 0.026 8.9E-07 55.3 4.3 30 327-356 237-266 (297)
297 2vz8_A Fatty acid synthase; tr 92.9 0.024 8.3E-07 70.8 0.9 43 382-427 1306-1348(2512)
298 1wg8_A Predicted S-adenosylmet 92.7 0.17 5.9E-06 50.5 6.7 37 318-356 17-53 (285)
299 2dph_A Formaldehyde dismutase; 91.7 0.5 1.7E-05 47.7 8.7 102 318-428 180-300 (398)
300 1f8f_A Benzyl alcohol dehydrog 91.6 0.46 1.6E-05 47.4 8.3 96 319-428 186-290 (371)
301 1pl8_A Human sorbitol dehydrog 91.2 0.5 1.7E-05 46.9 8.0 96 318-427 166-273 (356)
302 3vyw_A MNMC2; tRNA wobble urid 90.9 1.5 5E-05 44.1 11.2 65 379-450 177-243 (308)
303 3ufb_A Type I restriction-modi 90.6 1.5 5E-05 46.8 11.5 107 314-426 208-361 (530)
304 4ej6_A Putative zinc-binding d 89.8 0.83 2.8E-05 45.8 8.4 98 317-428 176-285 (370)
305 1g60_A Adenine-specific methyl 89.8 0.27 9.3E-06 47.1 4.5 30 327-356 214-243 (260)
306 1e3j_A NADP(H)-dependent ketos 89.5 1.6 5.5E-05 43.1 10.1 96 318-427 163-271 (352)
307 3s2e_A Zinc-containing alcohol 89.4 0.61 2.1E-05 45.8 6.9 94 320-427 163-263 (340)
308 1pqw_A Polyketide synthase; ro 89.1 1.3 4.5E-05 39.6 8.4 94 319-427 34-137 (198)
309 1kol_A Formaldehyde dehydrogen 89.0 1.2 4E-05 44.8 8.8 101 319-428 181-301 (398)
310 1g55_A DNA cytosine methyltran 88.9 3.2 0.00011 41.5 11.9 139 328-470 4-167 (343)
311 3two_A Mannitol dehydrogenase; 88.5 1.1 3.8E-05 44.1 8.1 92 320-428 173-266 (348)
312 2c7p_A Modification methylase 88.4 11 0.00038 37.5 15.4 138 327-470 12-171 (327)
313 1uuf_A YAHK, zinc-type alcohol 87.0 1 3.5E-05 45.1 6.9 91 320-427 191-288 (369)
314 2j3h_A NADP-dependent oxidored 86.5 1.9 6.6E-05 42.1 8.4 95 318-427 150-255 (345)
315 1v3u_A Leukotriene B4 12- hydr 86.5 1.8 6.3E-05 42.1 8.2 94 319-427 141-244 (333)
316 1cdo_A Alcohol dehydrogenase; 86.2 2.5 8.5E-05 42.0 9.1 95 319-427 188-294 (374)
317 4b7c_A Probable oxidoreductase 85.9 1.8 6.1E-05 42.3 7.8 95 317-427 143-248 (336)
318 4dcm_A Ribosomal RNA large sub 85.8 2.7 9.3E-05 42.6 9.3 110 310-427 24-136 (375)
319 1p0f_A NADP-dependent alcohol 85.6 2.8 9.6E-05 41.6 9.2 95 319-427 187-293 (373)
320 3fpc_A NADP-dependent alcohol 85.1 1.6 5.6E-05 43.0 7.1 97 317-427 160-266 (352)
321 1e3i_A Alcohol dehydrogenase, 85.0 3.1 0.00011 41.4 9.2 95 319-427 191-297 (376)
322 2jhf_A Alcohol dehydrogenase E 84.9 3 0.0001 41.5 9.0 95 319-427 187-293 (374)
323 3pvc_A TRNA 5-methylaminomethy 84.7 1.9 6.6E-05 46.8 8.0 62 385-453 169-231 (689)
324 3goh_A Alcohol dehydrogenase, 84.5 0.84 2.9E-05 44.3 4.6 90 318-426 137-228 (315)
325 2hcy_A Alcohol dehydrogenase 1 84.3 1.5 5.2E-05 43.2 6.5 94 320-427 166-269 (347)
326 1boo_A Protein (N-4 cytosine-s 84.3 1.5 5E-05 43.5 6.4 72 383-454 29-122 (323)
327 2hwk_A Helicase NSP2; rossman 84.3 2 6.8E-05 43.2 7.2 86 386-473 205-298 (320)
328 3gms_A Putative NADPH:quinone 84.3 2.4 8E-05 41.6 7.8 95 318-427 139-243 (340)
329 3uog_A Alcohol dehydrogenase; 84.0 1.5 5E-05 43.7 6.3 94 319-427 185-287 (363)
330 2fzw_A Alcohol dehydrogenase c 84.0 2.9 0.0001 41.4 8.5 95 319-427 186-292 (373)
331 3uko_A Alcohol dehydrogenase c 83.2 3.5 0.00012 41.1 8.7 95 319-427 189-295 (378)
332 1rjw_A ADH-HT, alcohol dehydro 83.0 4.1 0.00014 40.0 8.9 92 320-426 161-260 (339)
333 3qv2_A 5-cytosine DNA methyltr 82.4 14 0.00049 36.8 12.8 123 327-456 11-160 (327)
334 1eg2_A Modification methylase 82.1 2.3 7.9E-05 42.4 6.8 50 406-455 85-143 (319)
335 3ubt_Y Modification methylase 81.4 39 0.0014 32.6 15.3 137 328-470 2-161 (331)
336 3jv7_A ADH-A; dehydrogenase, n 81.3 2.7 9.3E-05 41.2 7.0 94 320-427 168-270 (345)
337 1piw_A Hypothetical zinc-type 81.1 1.1 3.6E-05 44.6 3.9 93 319-426 175-275 (360)
338 3g7u_A Cytosine-specific methy 80.8 15 0.00051 37.3 12.4 138 328-470 4-170 (376)
339 3nx4_A Putative oxidoreductase 80.3 2.9 0.0001 40.4 6.7 94 320-427 142-241 (324)
340 4dvj_A Putative zinc-dependent 80.3 5.3 0.00018 39.7 8.8 86 327-426 173-269 (363)
341 3ps9_A TRNA 5-methylaminomethy 79.9 6 0.0002 42.7 9.6 60 385-451 177-237 (676)
342 2zig_A TTHA0409, putative modi 79.9 0.93 3.2E-05 44.2 3.0 48 407-454 77-138 (297)
343 1yb5_A Quinone oxidoreductase; 79.6 5.3 0.00018 39.5 8.4 94 319-427 166-269 (351)
344 3qwb_A Probable quinone oxidor 79.1 3 0.0001 40.7 6.3 92 320-426 145-246 (334)
345 1rjd_A PPM1P, carboxy methyl t 78.9 1.9 6.6E-05 43.3 5.0 100 326-428 98-233 (334)
346 3dmg_A Probable ribosomal RNA 78.8 3.4 0.00012 42.0 6.9 106 307-427 30-139 (381)
347 3jyn_A Quinone oxidoreductase; 78.7 4.8 0.00016 39.1 7.7 94 319-427 136-239 (325)
348 2eih_A Alcohol dehydrogenase; 77.5 3.9 0.00013 40.1 6.7 93 320-427 163-265 (343)
349 2h6e_A ADH-4, D-arabinose 1-de 77.5 3.2 0.00011 40.8 6.0 92 320-427 168-269 (344)
350 2b5w_A Glucose dehydrogenase; 77.2 4.6 0.00016 39.9 7.2 91 327-428 174-274 (357)
351 3m6i_A L-arabinitol 4-dehydrog 77.2 8.6 0.0003 37.8 9.1 98 317-428 173-284 (363)
352 1jvb_A NAD(H)-dependent alcoho 76.7 5.5 0.00019 39.1 7.5 96 319-428 166-272 (347)
353 1i4w_A Mitochondrial replicati 76.7 2.1 7.3E-05 43.5 4.6 30 327-356 60-91 (353)
354 4eye_A Probable oxidoreductase 76.2 3.6 0.00012 40.4 6.1 93 319-426 155-256 (342)
355 2c0c_A Zinc binding alcohol de 75.8 8.5 0.00029 38.1 8.7 96 318-428 158-262 (362)
356 1vj0_A Alcohol dehydrogenase, 74.8 4.1 0.00014 40.8 6.1 96 319-428 190-299 (380)
357 1zsy_A Mitochondrial 2-enoyl t 74.4 20 0.00067 35.3 10.9 97 319-427 163-270 (357)
358 1iz0_A Quinone oxidoreductase; 73.5 4.7 0.00016 38.7 6.0 87 321-427 123-218 (302)
359 2d8a_A PH0655, probable L-thre 73.2 7 0.00024 38.3 7.2 93 320-427 165-267 (348)
360 3tos_A CALS11; methyltransfera 73.1 11 0.00038 36.6 8.6 58 384-446 179-238 (257)
361 3krt_A Crotonyl COA reductase; 72.5 7.1 0.00024 40.1 7.3 93 320-427 225-344 (456)
362 1qor_A Quinone oxidoreductase; 72.1 7.2 0.00025 37.7 7.0 94 319-427 136-239 (327)
363 4a0s_A Octenoyl-COA reductase/ 70.8 13 0.00045 37.7 8.9 93 320-427 217-336 (447)
364 1xa0_A Putative NADPH dependen 69.8 5.1 0.00018 38.8 5.3 94 320-427 145-246 (328)
365 3fbg_A Putative arginate lyase 69.5 8.1 0.00028 37.9 6.7 88 323-426 150-247 (346)
366 4eez_A Alcohol dehydrogenase 1 68.5 26 0.00089 33.9 10.1 93 320-426 160-262 (348)
367 4dup_A Quinone oxidoreductase; 68.5 4.7 0.00016 39.8 4.8 92 319-427 163-265 (353)
368 2cdc_A Glucose dehydrogenase g 68.1 9.9 0.00034 37.6 7.1 88 327-427 182-278 (366)
369 2j8z_A Quinone oxidoreductase; 67.6 9.5 0.00032 37.6 6.8 94 320-428 159-262 (354)
370 2zb4_A Prostaglandin reductase 67.5 10 0.00035 37.2 7.0 99 317-427 152-260 (357)
371 1tt7_A YHFP; alcohol dehydroge 67.4 4.8 0.00016 39.1 4.5 95 320-428 146-248 (330)
372 3ip1_A Alcohol dehydrogenase, 67.0 20 0.00067 36.0 9.1 94 320-427 210-318 (404)
373 2dq4_A L-threonine 3-dehydroge 65.9 4.5 0.00015 39.6 4.0 92 318-427 160-262 (343)
374 3gaz_A Alcohol dehydrogenase s 64.4 7.6 0.00026 38.1 5.3 91 319-426 146-245 (343)
375 2py6_A Methyltransferase FKBM; 64.0 7.3 0.00025 39.9 5.3 38 318-357 221-262 (409)
376 3gqv_A Enoyl reductase; medium 63.8 19 0.00064 35.8 8.1 88 327-427 166-263 (371)
377 3tqh_A Quinone oxidoreductase; 63.1 12 0.00042 36.1 6.5 94 317-426 146-244 (321)
378 1wly_A CAAR, 2-haloacrylate re 62.8 15 0.00051 35.6 7.1 93 320-427 142-244 (333)
379 2cf5_A Atccad5, CAD, cinnamyl 61.1 11 0.00038 37.1 5.9 91 320-427 176-275 (357)
380 1boo_A Protein (N-4 cytosine-s 61.1 7.5 0.00026 38.4 4.7 41 327-370 254-294 (323)
381 4a2c_A Galactitol-1-phosphate 59.1 65 0.0022 31.0 11.0 97 318-428 155-261 (346)
382 1g60_A Adenine-specific methyl 58.5 13 0.00044 35.2 5.7 46 406-454 53-101 (260)
383 1gu7_A Enoyl-[acyl-carrier-pro 57.6 29 0.00099 33.9 8.2 96 320-427 163-275 (364)
384 2km1_A Protein DRE2; yeast, an 56.6 8 0.00027 34.5 3.5 44 380-425 52-96 (136)
385 3fwz_A Inner membrane protein 55.3 23 0.0008 29.9 6.3 106 328-448 9-120 (140)
386 1yqd_A Sinapyl alcohol dehydro 54.4 12 0.00041 37.1 4.9 91 320-426 183-281 (366)
387 4h0n_A DNMT2; SAH binding, tra 54.0 1.8E+02 0.006 28.9 14.8 121 328-455 5-148 (333)
388 4gua_A Non-structural polyprot 52.5 26 0.00087 38.3 7.1 85 380-468 215-308 (670)
389 3tka_A Ribosomal RNA small sub 52.0 24 0.00081 36.1 6.5 37 318-356 52-91 (347)
390 2oo3_A Protein involved in cat 51.9 65 0.0022 31.8 9.6 113 328-447 94-218 (283)
391 2uyo_A Hypothetical protein ML 51.3 34 0.0012 33.7 7.5 100 326-429 103-220 (310)
392 2vn8_A Reticulon-4-interacting 51.2 34 0.0012 33.8 7.5 92 321-427 181-280 (375)
393 3trk_A Nonstructural polyprote 49.3 28 0.00097 34.7 6.4 87 380-468 204-298 (324)
394 1eg2_A Modification methylase 45.9 15 0.00051 36.4 3.9 30 327-356 244-273 (319)
395 2f1k_A Prephenate dehydrogenas 38.3 1.3E+02 0.0044 27.9 9.0 85 328-424 2-88 (279)
396 3pi7_A NADH oxidoreductase; gr 37.2 29 0.00099 33.8 4.5 86 328-427 167-263 (349)
397 3ggo_A Prephenate dehydrogenas 33.9 1.5E+02 0.0053 28.7 9.1 89 326-424 33-125 (314)
398 4a27_A Synaptic vesicle membra 33.7 41 0.0014 32.9 4.9 91 318-427 137-238 (349)
399 3me5_A Cytosine-specific methy 32.7 2.8E+02 0.0095 29.1 11.3 26 326-351 88-113 (482)
400 1wg8_A Predicted S-adenosylmet 32.2 16 0.00054 36.3 1.6 30 404-433 210-239 (285)
401 3swr_A DNA (cytosine-5)-methyl 30.9 5E+02 0.017 30.0 13.7 126 326-456 540-702 (1002)
402 4hp8_A 2-deoxy-D-gluconate 3-d 30.8 1.5E+02 0.0052 28.2 8.3 70 327-397 10-89 (247)
403 3tka_A Ribosomal RNA small sub 30.2 18 0.0006 37.0 1.6 30 404-433 251-280 (347)
404 3ius_A Uncharacterized conserv 29.9 2.7E+02 0.0091 25.4 9.7 91 327-426 6-101 (286)
405 3l9w_A Glutathione-regulated p 29.8 1.4E+02 0.0046 30.6 8.2 90 328-426 6-101 (413)
406 1m6y_A S-adenosyl-methyltransf 28.2 21 0.0007 35.2 1.6 30 404-433 222-251 (301)
407 2h78_A Hibadh, 3-hydroxyisobut 26.8 4E+02 0.014 24.9 10.5 108 327-447 4-116 (302)
408 1h2b_A Alcohol dehydrogenase; 26.5 1.3E+02 0.0043 29.5 7.0 94 319-427 182-285 (359)
409 3slk_A Polyketide synthase ext 25.9 27 0.00094 38.9 2.3 90 320-427 342-442 (795)
410 2qrv_A DNA (cytosine-5)-methyl 25.4 1.4E+02 0.0049 29.1 7.2 67 326-394 16-90 (295)
411 3k6j_A Protein F01G10.3, confi 24.7 2.3E+02 0.0077 29.7 8.9 97 323-425 51-164 (460)
412 3g0o_A 3-hydroxyisobutyrate de 24.6 4.4E+02 0.015 24.9 10.4 110 327-448 8-122 (303)
413 3qha_A Putative oxidoreductase 24.1 3.2E+02 0.011 25.9 9.3 106 328-447 17-124 (296)
414 2y0c_A BCEC, UDP-glucose dehyd 22.5 2.9E+02 0.0099 28.6 9.2 97 327-426 9-127 (478)
415 3k1t_A Glutamate--cysteine lig 22.3 80 0.0027 33.0 4.6 48 36-86 223-272 (432)
416 2cvz_A Dehydrogenase, 3-hydrox 21.3 4.8E+02 0.016 23.9 10.5 104 328-446 3-108 (289)
417 3ce6_A Adenosylhomocysteinase; 21.0 1.4E+02 0.0049 31.5 6.5 86 327-429 275-363 (494)
No 1
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.64 E-value=2.6e-15 Score=138.29 Aligned_cols=157 Identities=14% Similarity=0.073 Sum_probs=110.1
Q ss_pred hHHHhcC-CCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCCCCccchhe
Q 046488 314 LIPEVLD-IKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFDNTLDLIH 392 (480)
Q Consensus 314 ~I~~vL~-l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFpd~SFDlV~ 392 (480)
.+..++. +.++ .+|||+|||+|.++..+++.+..+++++++. .+...+..+-.+.+..++...+| ++++||+|+
T Consensus 33 ~~~~~~~~~~~~--~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~d~~~~~-~~~~fD~v~ 107 (211)
T 3e23_A 33 TLTKFLGELPAG--AKILELGCGAGYQAEAMLAAGFDVDATDGSP--ELAAEASRRLGRPVRTMLFHQLD-AIDAYDAVW 107 (211)
T ss_dssp HHHHHHTTSCTT--CEEEESSCTTSHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHTSCCEECCGGGCC-CCSCEEEEE
T ss_pred HHHHHHHhcCCC--CcEEEECCCCCHHHHHHHHcCCeEEEECCCH--HHHHHHHHhcCCceEEeeeccCC-CCCcEEEEE
Confidence 3444444 4444 4899999999999999999988999988752 33333322224566667778888 899999999
Q ss_pred ecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCCh------------hhHHHHHHHHHHcC-ceeeEEEEeeccC
Q 046488 393 TTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK------------EDMNDYLEVFKMLK-YKKHKWVVVPKRD 459 (480)
Q Consensus 393 ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~------------edL~~~~~~l~~lG-fkkl~W~~~~k~d 459 (480)
+..+++|+.+.+ +..++.++.|+|||||++++....... -..+.+..+++..| |+.+.........
T Consensus 108 ~~~~l~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~~~ 186 (211)
T 3e23_A 108 AHACLLHVPRDE-LADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESSEGKG 186 (211)
T ss_dssp ECSCGGGSCHHH-HHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEEEEC
T ss_pred ecCchhhcCHHH-HHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEeccCCC
Confidence 999999887332 367999999999999999987432211 13467888999999 9988765543322
Q ss_pred C-CCcceeEEEEEEeCCC
Q 046488 460 K-DDREVFFSAVLEKPPR 476 (480)
Q Consensus 460 ~-~~~E~~lsav~qKP~~ 476 (480)
- .....++.++..||..
T Consensus 187 ~~~~~~~wl~~~~~~~~~ 204 (211)
T 3e23_A 187 FDQELAQFLHVSVRKPEL 204 (211)
T ss_dssp TTSCEEEEEEEEEECCCC
T ss_pred CCCCCceEEEEEEecCcc
Confidence 1 2234455555666543
No 2
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.62 E-value=2.7e-15 Score=142.77 Aligned_cols=131 Identities=17% Similarity=0.217 Sum_probs=96.4
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHH----HHHhCC--CCeeeecccCCCCCCCccch
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEM----IALRGL--VPLYITINQRVPFFDNTLDL 390 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~----iA~rgl--ip~~~~~ae~LPFpd~SFDl 390 (480)
+.+.+.++ .+|||+|||+|.++..+++++..+++++++. .+... +...+. +.+..++++.+||++++||+
T Consensus 31 ~~l~~~~~--~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~--~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~ 106 (260)
T 1vl5_A 31 QIAALKGN--EEVLDVATGGGHVANAFAPFVKKVVAFDLTE--DILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHI 106 (260)
T ss_dssp HHHTCCSC--CEEEEETCTTCHHHHHHGGGSSEEEEEESCH--HHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEE
T ss_pred HHhCCCCC--CEEEEEeCCCCHHHHHHHHhCCEEEEEeCCH--HHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEE
Confidence 34455444 4899999999999999999877888888652 33322 222232 44556778889999999999
Q ss_pred heecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCCh----------------------hhHHHHHHHHHHcCce
Q 046488 391 IHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK----------------------EDMNDYLEVFKMLKYK 448 (480)
Q Consensus 391 V~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~----------------------edL~~~~~~l~~lGfk 448 (480)
|++..+++|+.+. ..+|.|+.|+|||||+|++..+.... .....+.+++++.||+
T Consensus 107 V~~~~~l~~~~d~---~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 183 (260)
T 1vl5_A 107 VTCRIAAHHFPNP---ASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFE 183 (260)
T ss_dssp EEEESCGGGCSCH---HHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCE
T ss_pred EEEhhhhHhcCCH---HHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCe
Confidence 9999999999876 46999999999999999986433211 1124577888999998
Q ss_pred eeEEEE
Q 046488 449 KHKWVV 454 (480)
Q Consensus 449 kl~W~~ 454 (480)
.+.+..
T Consensus 184 ~~~~~~ 189 (260)
T 1vl5_A 184 LEELHC 189 (260)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 766544
No 3
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.62 E-value=2.3e-15 Score=143.41 Aligned_cols=96 Identities=17% Similarity=0.116 Sum_probs=78.2
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhC--CCCeeeecccCCCCCCCccchheecc-cccCccCh
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRG--LVPLYITINQRVPFFDNTLDLIHTTR-FLDGWIDF 403 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rg--lip~~~~~ae~LPFpd~SFDlV~ss~-vL~h~~d~ 403 (480)
.+|||+|||+|.++..+++++..+++++++ ..+.. .+.+. .+.+..++...+|+ +++||+|+|.. +++|+.++
T Consensus 52 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s--~~~~~-~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~ 127 (263)
T 3pfg_A 52 ASLLDVACGTGMHLRHLADSFGTVEGLELS--ADMLA-IARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQ 127 (263)
T ss_dssp CEEEEETCTTSHHHHHHTTTSSEEEEEESC--HHHHH-HHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCHH
T ss_pred CcEEEeCCcCCHHHHHHHHcCCeEEEEECC--HHHHH-HHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCCH
Confidence 489999999999999999998889888875 23333 33332 35566777888888 89999999998 99988765
Q ss_pred hcHHHHHHHHHhcccCCcEEEEe
Q 046488 404 VLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 404 ~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
..+..++.++.|+|||||+|++.
T Consensus 128 ~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 128 AELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEE
Confidence 55578999999999999999996
No 4
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.62 E-value=4.4e-15 Score=137.00 Aligned_cols=148 Identities=16% Similarity=0.127 Sum_probs=104.8
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhCC---CEEEEEecCCCh--hHHHHHHHhC--CCCeeeecccCCCCCCCccc
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREFN---VTLVSAIINLGA--PFNEMIALRG--LVPLYITINQRVPFFDNTLD 389 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~g---V~Vv~vd~d~~~--~~~~~iA~rg--lip~~~~~ae~LPFpd~SFD 389 (480)
+.+.+.++ .+|||+|||+|.++..+++.+ ..+++++++... .+...+...+ .+.+..++.+.+|+++++||
T Consensus 31 ~~~~~~~~--~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 108 (219)
T 3dh0_A 31 KEFGLKEG--MTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVD 108 (219)
T ss_dssp HHHTCCTT--CEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEE
T ss_pred HHhCCCCC--CEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCee
Confidence 34455554 489999999999999998874 688888865211 1112222233 24455667888999999999
Q ss_pred hheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChh----------hHHHHHHHHHHcCceeeEEEEeeccC
Q 046488 390 LIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKE----------DMNDYLEVFKMLKYKKHKWVVVPKRD 459 (480)
Q Consensus 390 lV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~e----------dL~~~~~~l~~lGfkkl~W~~~~k~d 459 (480)
+|++..+++|+.+. ..++.++.|+|||||++++..+..... ..+.+..+++..||+.+......
T Consensus 109 ~v~~~~~l~~~~~~---~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~--- 182 (219)
T 3dh0_A 109 FIFMAFTFHELSEP---LKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVG--- 182 (219)
T ss_dssp EEEEESCGGGCSSH---HHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEET---
T ss_pred EEEeehhhhhcCCH---HHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeC---
Confidence 99999999998765 469999999999999999986543321 24668889999999987653321
Q ss_pred CCCcceeEEEEEEeCCC
Q 046488 460 KDDREVFFSAVLEKPPR 476 (480)
Q Consensus 460 ~~~~E~~lsav~qKP~~ 476 (480)
......+.+||..
T Consensus 183 ----~~~~~~~~~k~~~ 195 (219)
T 3dh0_A 183 ----KYCFGVYAMIVKQ 195 (219)
T ss_dssp ----TTEEEEEEECC--
T ss_pred ----CceEEEEEEeccc
Confidence 1234557788755
No 5
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.61 E-value=5e-15 Score=135.35 Aligned_cols=127 Identities=12% Similarity=0.011 Sum_probs=97.6
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHh-CCCCeeeecccCCCCCCCccchheecccccCccChhc
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALR-GLVPLYITINQRVPFFDNTLDLIHTTRFLDGWIDFVL 405 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~r-glip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d~~~ 405 (480)
.+|||+|||+|.++..|++++..+++++++ ..+......+ ..+.+..++.+.+|+++++||+|++..+++|+...+
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~- 119 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASLGHQIEGLEPA--TRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGE- 119 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHTTCCEEEECCC--HHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTT-
T ss_pred CeEEEecCCCCHHHHHHHhcCCeEEEEeCC--HHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHH-
Confidence 379999999999999999998888888865 2343333332 235566677888999999999999999999986322
Q ss_pred HHHHHHHHHhcccCCcEEEEeeccCCh-------------hhHHHHHHHHHHcCceeeEEEEee
Q 046488 406 LDFILYDWDRVLRPGGLLWIDSFFCAK-------------EDMNDYLEVFKMLKYKKHKWVVVP 456 (480)
Q Consensus 406 l~~~L~EI~RVLKPGG~fiI~~f~~~~-------------edL~~~~~~l~~lGfkkl~W~~~~ 456 (480)
...++.++.|+|||||++++..+.... -..+.+.++++..||+.+......
T Consensus 120 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 183 (203)
T 3h2b_A 120 LPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDP 183 (203)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECT
T ss_pred HHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecC
Confidence 367999999999999999987543321 124678889999999988765543
No 6
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.60 E-value=5.2e-15 Score=137.32 Aligned_cols=119 Identities=13% Similarity=0.013 Sum_probs=90.9
Q ss_pred eEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhC---CCCeeeecccCCCCCCCccchheecccccCccChh
Q 046488 328 IGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRG---LVPLYITINQRVPFFDNTLDLIHTTRFLDGWIDFV 404 (480)
Q Consensus 328 ~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rg---lip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d~~ 404 (480)
+|||||||+|.++..+++++..+++++++ ..+.. .|.+. .+.+..++++.+ +++++||+|++..+++|+.++
T Consensus 45 ~vLDiGcG~G~~~~~l~~~~~~v~gvD~s--~~~~~-~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~~~- 119 (250)
T 2p7i_A 45 NLLELGSFKGDFTSRLQEHFNDITCVEAS--EEAIS-HAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHIDDP- 119 (250)
T ss_dssp CEEEESCTTSHHHHHHTTTCSCEEEEESC--HHHHH-HHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGCSSH-
T ss_pred cEEEECCCCCHHHHHHHHhCCcEEEEeCC--HHHHH-HHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhhcCH-
Confidence 69999999999999999988888888865 23333 33332 344556666666 578999999999999999876
Q ss_pred cHHHHHHHHH-hcccCCcEEEEeeccCCh------------------------------hhHHHHHHHHHHcCceeeEEE
Q 046488 405 LLDFILYDWD-RVLRPGGLLWIDSFFCAK------------------------------EDMNDYLEVFKMLKYKKHKWV 453 (480)
Q Consensus 405 ~l~~~L~EI~-RVLKPGG~fiI~~f~~~~------------------------------edL~~~~~~l~~lGfkkl~W~ 453 (480)
..+|.|+. |+|||||++++....... -..+.+.++++..||+.+.+.
T Consensus 120 --~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 197 (250)
T 2p7i_A 120 --VALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYRS 197 (250)
T ss_dssp --HHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred --HHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEEe
Confidence 46999999 999999999987422110 023467889999999987654
No 7
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.60 E-value=5.6e-16 Score=151.29 Aligned_cols=97 Identities=16% Similarity=0.194 Sum_probs=77.6
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCCCCccchheecccccCccChhcH
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFDNTLDLIHTTRFLDGWIDFVLL 406 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d~~~l 406 (480)
.+|||||||+|.++..|++++..|+++|++. .+..+......+.+..+.++.+|+++++||+|+|..++ ||.+.
T Consensus 41 ~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~--~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~-h~~~~--- 114 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLAEFFERVHAVDPGE--AQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAM-HWFDL--- 114 (257)
T ss_dssp SEEEEESCTTTTTHHHHHTTCSEEEEEESCH--HHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCC-TTCCH---
T ss_pred CCEEEEcCCCCHHHHHHHHhCCEEEEEeCcH--HhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeeh-hHhhH---
Confidence 4799999999999999999999999998762 33322222224556677899999999999999999998 55555
Q ss_pred HHHHHHHHhcccCCcEEEEeecc
Q 046488 407 DFILYDWDRVLRPGGLLWIDSFF 429 (480)
Q Consensus 407 ~~~L~EI~RVLKPGG~fiI~~f~ 429 (480)
..++.|+.|||||||+|++..+.
T Consensus 115 ~~~~~e~~rvLkpgG~l~~~~~~ 137 (257)
T 4hg2_A 115 DRFWAELRRVARPGAVFAAVTYG 137 (257)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCCEEEEEECC
Confidence 46999999999999999887543
No 8
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.60 E-value=1.1e-14 Score=135.41 Aligned_cols=98 Identities=17% Similarity=0.099 Sum_probs=76.4
Q ss_pred CCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHH----HHHhC-CCCeeeecccCCCCCCCccchheecc-cccC
Q 046488 326 IRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEM----IALRG-LVPLYITINQRVPFFDNTLDLIHTTR-FLDG 399 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~----iA~rg-lip~~~~~ae~LPFpd~SFDlV~ss~-vL~h 399 (480)
..+|||+|||+|.++..+++.+..+++++++. .+... ....+ .+.+..++...+|++ ++||+|++.. +++|
T Consensus 38 ~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~--~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~~ 114 (246)
T 1y8c_A 38 FDDYLDLACGTGNLTENLCPKFKNTWAVDLSQ--EMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFDLITCCLDSTNY 114 (246)
T ss_dssp TTEEEEETCTTSTTHHHHGGGSSEEEEECSCH--HHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEEEEEECTTGGGG
T ss_pred CCeEEEeCCCCCHHHHHHHHCCCcEEEEECCH--HHHHHHHHHHhhcCCCeEEEecccccCCcc-CCceEEEEcCccccc
Confidence 35899999999999999999988888888652 22222 22222 345566667788887 8999999998 9999
Q ss_pred ccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 400 WIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 400 ~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
+.++.....++.++.|+|||||++++.
T Consensus 115 ~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 115 IIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp CCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 865444578999999999999999984
No 9
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.58 E-value=2.3e-14 Score=128.16 Aligned_cols=144 Identities=15% Similarity=0.052 Sum_probs=102.9
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhC--CCCeeeecccCCCCCCCccchheec-ccccCccCh
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRG--LVPLYITINQRVPFFDNTLDLIHTT-RFLDGWIDF 403 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rg--lip~~~~~ae~LPFpd~SFDlV~ss-~vL~h~~d~ 403 (480)
.+|||+|||+|.++..+++.+..+++++++ +.....+.+. .+.+..++...+++++++||+|++. .+++++...
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~---~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~~ 124 (195)
T 3cgg_A 48 AKILDAGCGQGRIGGYLSKQGHDVLGTDLD---PILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLAED 124 (195)
T ss_dssp CEEEEETCTTTHHHHHHHHTTCEEEEEESC---HHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSCHH
T ss_pred CeEEEECCCCCHHHHHHHHCCCcEEEEcCC---HHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcChH
Confidence 489999999999999999998889888876 2223333332 2455666777788889999999998 667666433
Q ss_pred hcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEEEEeeccCC-CCcceeEEEEEEeC
Q 046488 404 VLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKWVVVPKRDK-DDREVFFSAVLEKP 474 (480)
Q Consensus 404 ~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W~~~~k~d~-~~~E~~lsav~qKP 474 (480)
....++.++.|+|||||++++..........+.+...++..||+............ .....++..+++|+
T Consensus 125 -~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 125 -GREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFESWDLKPFVQGSEFLVAVFTKK 195 (195)
T ss_dssp -HHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESSTTCCBCCTTCSEEEEEEEEC
T ss_pred -HHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecccccCcCCCCCcEEEEEEecC
Confidence 23679999999999999999875444334556788889999998765433211111 22344667788886
No 10
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.58 E-value=1.7e-14 Score=136.06 Aligned_cols=124 Identities=15% Similarity=0.093 Sum_probs=94.7
Q ss_pred CeEEEECCCCcHHHHHHhhC-CCEEEEEecCCChhHHHHHHHhC-----CCCeeeecccCCCCCCCccchheecccccCc
Q 046488 327 RIGLDFSIGTGTFAARMREF-NVTLVSAIINLGAPFNEMIALRG-----LVPLYITINQRVPFFDNTLDLIHTTRFLDGW 400 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~-gV~Vv~vd~d~~~~~~~~iA~rg-----lip~~~~~ae~LPFpd~SFDlV~ss~vL~h~ 400 (480)
.+|||+|||+|.++..++++ +..+++++++ +.....+.+. .+.+..++...+|+++++||+|++..+++|+
T Consensus 57 ~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s---~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 133 (266)
T 3ujc_A 57 SKVLDIGSGLGGGCMYINEKYGAHTHGIDIC---SNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDAILAL 133 (266)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCCEEEEEESC---HHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESCGGGS
T ss_pred CEEEEECCCCCHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHHHHhc
Confidence 48999999999999999987 8889998876 3333344433 2345566788899999999999999999998
Q ss_pred cChhcHHHHHHHHHhcccCCcEEEEeeccCCh-------------------hhHHHHHHHHHHcCceeeEEEE
Q 046488 401 IDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK-------------------EDMNDYLEVFKMLKYKKHKWVV 454 (480)
Q Consensus 401 ~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~-------------------edL~~~~~~l~~lGfkkl~W~~ 454 (480)
.+.. ...++.++.|+|||||++++..+.... ...+.+.++++..||+.+....
T Consensus 134 ~~~~-~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 205 (266)
T 3ujc_A 134 SLEN-KNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVSKD 205 (266)
T ss_dssp CHHH-HHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred ChHH-HHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 4322 367999999999999999997543222 0134677899999998876543
No 11
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.58 E-value=1.8e-14 Score=136.13 Aligned_cols=132 Identities=14% Similarity=0.238 Sum_probs=97.8
Q ss_pred HHHhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHH----HHHhC--CCCeeeecccCCCCCCCcc
Q 046488 315 IPEVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEM----IALRG--LVPLYITINQRVPFFDNTL 388 (480)
Q Consensus 315 I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~----iA~rg--lip~~~~~ae~LPFpd~SF 388 (480)
+-+.+++.++. +|||+|||+|.++..+++.+..+++++++. .+... +...+ .+.+..++++.+|+++++|
T Consensus 13 ~~~~~~~~~~~--~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 88 (239)
T 1xxl_A 13 MIKTAECRAEH--RVLDIGAGAGHTALAFSPYVQECIGVDATK--EMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSF 88 (239)
T ss_dssp HHHHHTCCTTC--EEEEESCTTSHHHHHHGGGSSEEEEEESCH--HHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCE
T ss_pred HHHHhCcCCCC--EEEEEccCcCHHHHHHHHhCCEEEEEECCH--HHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcE
Confidence 33556666654 899999999999999999888888888652 23222 22223 2445567788899999999
Q ss_pred chheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCCh----------------------hhHHHHHHHHHHcC
Q 046488 389 DLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK----------------------EDMNDYLEVFKMLK 446 (480)
Q Consensus 389 DlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~----------------------edL~~~~~~l~~lG 446 (480)
|+|++..+++|+.+. ..++.++.|+|||||++++..+.... -..+.+.++++..|
T Consensus 89 D~v~~~~~l~~~~~~---~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 165 (239)
T 1xxl_A 89 DIITCRYAAHHFSDV---RKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQ 165 (239)
T ss_dssp EEEEEESCGGGCSCH---HHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTT
T ss_pred EEEEECCchhhccCH---HHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCC
Confidence 999999999999876 46999999999999999986433211 11345778889999
Q ss_pred ceeeEEE
Q 046488 447 YKKHKWV 453 (480)
Q Consensus 447 fkkl~W~ 453 (480)
|..+...
T Consensus 166 f~~~~~~ 172 (239)
T 1xxl_A 166 LAYQDIQ 172 (239)
T ss_dssp EEEEEEE
T ss_pred CcEEEEE
Confidence 9866433
No 12
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.58 E-value=2.2e-14 Score=132.26 Aligned_cols=147 Identities=16% Similarity=0.152 Sum_probs=95.7
Q ss_pred CCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHh----CCCCeeeecccCCCCCCCccchheecccccCcc
Q 046488 326 IRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALR----GLVPLYITINQRVPFFDNTLDLIHTTRFLDGWI 401 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~r----glip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~ 401 (480)
..+|||+|||+|.++..+++.+..+++++++. .+......+ +.+.+..++.+.++ ++++||+|++..+++|+.
T Consensus 52 ~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~ 128 (216)
T 3ofk_A 52 VSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMP--RAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEVLYYLE 128 (216)
T ss_dssp EEEEEEECCTTSHHHHHHGGGEEEEEEEESCH--HHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESCGGGSS
T ss_pred CCcEEEEcCCCCHHHHHHHHcCCEEEEEECCH--HHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccHHHhCC
Confidence 35899999999999999999887888888652 333322222 22445566777787 789999999999999998
Q ss_pred ChhcHHHHHHHHHhcccCCcEEEEee--------ccCChhhHHHHHHHHHHcCceeeEEEEeeccCCCCcceeEEEEEEe
Q 046488 402 DFVLLDFILYDWDRVLRPGGLLWIDS--------FFCAKEDMNDYLEVFKMLKYKKHKWVVVPKRDKDDREVFFSAVLEK 473 (480)
Q Consensus 402 d~~~l~~~L~EI~RVLKPGG~fiI~~--------f~~~~edL~~~~~~l~~lGfkkl~W~~~~k~d~~~~E~~lsav~qK 473 (480)
++..+..++.++.|+|||||++++.. |.. ....+.+..++.. ++..+....... .-..+-++.++++|
T Consensus 129 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~e~~~~~~--~~~~~d~~l~~~~~ 204 (216)
T 3ofk_A 129 DMTQMRTAIDNMVKMLAPGGHLVFGSARDATCRRWGH-VAGAETVITILTE-ALTEVERVQCQG--QSADEDCLLARFRN 204 (216)
T ss_dssp SHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHTTC-SCCHHHHHHHHHH-HSEEEEEEEEEC--SSTTCEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEecCCCcchhhhh-hhhHHHHHHHHHh-hccceEEEeccC--CccccchhHHHHhC
Confidence 77655678999999999999999864 222 1112223334332 133322111111 11234567788999
Q ss_pred CCCCCC
Q 046488 474 PPRPFR 479 (480)
Q Consensus 474 P~~~~~ 479 (480)
|...+.
T Consensus 205 ~~~~~~ 210 (216)
T 3ofk_A 205 PERSSI 210 (216)
T ss_dssp CC----
T ss_pred Cccccc
Confidence 987543
No 13
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.57 E-value=4.8e-14 Score=130.23 Aligned_cols=127 Identities=18% Similarity=0.226 Sum_probs=96.7
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHh----CC-------CCeeeecccCCCCCCCccchheecc
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALR----GL-------VPLYITINQRVPFFDNTLDLIHTTR 395 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~r----gl-------ip~~~~~ae~LPFpd~SFDlV~ss~ 395 (480)
.+|||+|||+|.++..+++.+..+++++++. .+...+..+ +. +.+..++...+|+++++||+|++..
T Consensus 32 ~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 109 (235)
T 3sm3_A 32 DEILDIGCGSGKISLELASKGYSVTGIDINS--EAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQA 109 (235)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEEESCH--HHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEES
T ss_pred CeEEEECCCCCHHHHHHHhCCCeEEEEECCH--HHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEcc
Confidence 4899999999999999999998999988762 232222221 11 2344566788999999999999999
Q ss_pred cccCccChhcHHHHHHHHHhcccCCcEEEEeeccCC--------------------------------------hhhHHH
Q 046488 396 FLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCA--------------------------------------KEDMND 437 (480)
Q Consensus 396 vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~--------------------------------------~edL~~ 437 (480)
+++|+.+......++.++.|+|||||++++..+... .-..+.
T Consensus 110 ~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (235)
T 3sm3_A 110 FLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKE 189 (235)
T ss_dssp CGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHH
T ss_pred hhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHHH
Confidence 999998775445799999999999999998743221 012456
Q ss_pred HHHHHHHcCceeeEEEEe
Q 046488 438 YLEVFKMLKYKKHKWVVV 455 (480)
Q Consensus 438 ~~~~l~~lGfkkl~W~~~ 455 (480)
+.+++++.||+.+.+...
T Consensus 190 l~~ll~~aGf~~~~~~~~ 207 (235)
T 3sm3_A 190 LVFLLTDCRFEIDYFRVK 207 (235)
T ss_dssp HHHHHHTTTEEEEEEEEE
T ss_pred HHHHHHHcCCEEEEEEec
Confidence 888999999998876653
No 14
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.56 E-value=1.4e-14 Score=132.15 Aligned_cols=121 Identities=20% Similarity=0.285 Sum_probs=91.4
Q ss_pred eEEEECCCCcHHHHHHhhC-CCEEEEEecCCChhHHH----HHHHhC---CCCeeeecccCCCCCCCccchheecccccC
Q 046488 328 IGLDFSIGTGTFAARMREF-NVTLVSAIINLGAPFNE----MIALRG---LVPLYITINQRVPFFDNTLDLIHTTRFLDG 399 (480)
Q Consensus 328 ~VLDVGCGtG~fAa~Lae~-gV~Vv~vd~d~~~~~~~----~iA~rg---lip~~~~~ae~LPFpd~SFDlV~ss~vL~h 399 (480)
+|||+|||+|.++..++++ +..+++++++. .+.. .+...+ .+.+..++.+.+|+++++||+|++..+++|
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~--~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 123 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSDFSIRALDFSK--HMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFF 123 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSEEEEEEEESCH--HHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGG
T ss_pred EEEEECCCCCHHHHHHHHcCCCeEEEEECCH--HHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhh
Confidence 8999999999999999987 66788887652 2222 222222 244566778889999999999999999999
Q ss_pred ccChhcHHHHHHHHHhcccCCcEEEEeeccCCh---------------------------hhHHHHHHHHHHcCceeeEE
Q 046488 400 WIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK---------------------------EDMNDYLEVFKMLKYKKHKW 452 (480)
Q Consensus 400 ~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~---------------------------edL~~~~~~l~~lGfkkl~W 452 (480)
+.+. ..++.++.|+|||||++++...+... ...+.+.++++..||+.+..
T Consensus 124 ~~~~---~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 200 (219)
T 3dlc_A 124 WEDV---ATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEI 200 (219)
T ss_dssp CSCH---HHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEE
T ss_pred ccCH---HHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEEE
Confidence 8665 46999999999999999987433221 11245778999999987765
Q ss_pred E
Q 046488 453 V 453 (480)
Q Consensus 453 ~ 453 (480)
.
T Consensus 201 ~ 201 (219)
T 3dlc_A 201 I 201 (219)
T ss_dssp E
T ss_pred E
Confidence 4
No 15
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.56 E-value=6.6e-14 Score=129.19 Aligned_cols=140 Identities=11% Similarity=0.076 Sum_probs=100.1
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhC--CCCeeeecccCCCCCCCccchheecccccCccChh
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRG--LVPLYITINQRVPFFDNTLDLIHTTRFLDGWIDFV 404 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rg--lip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d~~ 404 (480)
.+|||+|||+|.++..+++++..+++++++. .+......+- .+.+..+++..+|++ ++||+|++..+++|+.++.
T Consensus 47 ~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~ 123 (220)
T 3hnr_A 47 GNVLEFGVGTGNLTNKLLLAGRTVYGIEPSR--EMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVSTYAFHHLTDDE 123 (220)
T ss_dssp SEEEEECCTTSHHHHHHHHTTCEEEEECSCH--HHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEESCGGGSCHHH
T ss_pred CeEEEeCCCCCHHHHHHHhCCCeEEEEeCCH--HHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEECcchhcCChHH
Confidence 4899999999999999999998999888652 3333332221 456677778889988 9999999999999987664
Q ss_pred cHHHHHHHHHhcccCCcEEEEeeccCCh-h---------------------------hHHHHHHHHHHcCceeeEEEEee
Q 046488 405 LLDFILYDWDRVLRPGGLLWIDSFFCAK-E---------------------------DMNDYLEVFKMLKYKKHKWVVVP 456 (480)
Q Consensus 405 ~l~~~L~EI~RVLKPGG~fiI~~f~~~~-e---------------------------dL~~~~~~l~~lGfkkl~W~~~~ 456 (480)
. ..++.++.|+|||||++++....... . ..+.+.+++++.||+.......
T Consensus 124 ~-~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~~- 201 (220)
T 3hnr_A 124 K-NVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTRLN- 201 (220)
T ss_dssp H-HHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEECS-
T ss_pred H-HHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEeecc-
Confidence 2 34899999999999999987422111 0 1245778999999964433221
Q ss_pred ccCCCCcceeEEEEEEeCCCCC
Q 046488 457 KRDKDDREVFFSAVLEKPPRPF 478 (480)
Q Consensus 457 k~d~~~~E~~lsav~qKP~~~~ 478 (480)
.....+..+||..++
T Consensus 202 -------~~~w~~~~~~~~~~~ 216 (220)
T 3hnr_A 202 -------HFVWVMEATKQLEHH 216 (220)
T ss_dssp -------SSEEEEEEEECSCCC
T ss_pred -------ceEEEEeehhhhhhh
Confidence 112244567776654
No 16
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.56 E-value=4e-15 Score=138.47 Aligned_cols=131 Identities=9% Similarity=-0.079 Sum_probs=92.2
Q ss_pred cCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHh------------------CCCCeeeecccC
Q 046488 319 LDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALR------------------GLVPLYITINQR 380 (480)
Q Consensus 319 L~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~r------------------glip~~~~~ae~ 380 (480)
+.+.++ .+|||+|||+|.++..|+++|..|+++|++. .+...+.++ ..+.+..+++..
T Consensus 18 l~~~~~--~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~--~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~ 93 (203)
T 1pjz_A 18 LNVVPG--ARVLVPLCGKSQDMSWLSGQGYHVVGAELSE--AAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFA 93 (203)
T ss_dssp HCCCTT--CEEEETTTCCSHHHHHHHHHCCEEEEEEECH--HHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSS
T ss_pred cccCCC--CEEEEeCCCCcHhHHHHHHCCCeEEEEeCCH--HHHHHHHHHccCCcccccccccccccCCccEEEECcccc
Confidence 344444 3899999999999999999999999988763 344333222 134566777888
Q ss_pred CCCCC-CccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEe--eccCC---h----hhHHHHHHHHHHcCceee
Q 046488 381 VPFFD-NTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWID--SFFCA---K----EDMNDYLEVFKMLKYKKH 450 (480)
Q Consensus 381 LPFpd-~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~--~f~~~---~----edL~~~~~~l~~lGfkkl 450 (480)
+|+++ ++||+|++..+++++.+.. ...++.|+.|+|||||++++. .+... . -..+++.++++. ||+..
T Consensus 94 l~~~~~~~fD~v~~~~~l~~l~~~~-~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~ 171 (203)
T 1pjz_A 94 LTARDIGHCAAFYDRAAMIALPADM-RERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVT 171 (203)
T ss_dssp STHHHHHSEEEEEEESCGGGSCHHH-HHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEE
T ss_pred CCcccCCCEEEEEECcchhhCCHHH-HHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEE
Confidence 99886 8999999988888876433 367999999999999984433 22110 0 123556677777 88766
Q ss_pred EEEEe
Q 046488 451 KWVVV 455 (480)
Q Consensus 451 ~W~~~ 455 (480)
.+...
T Consensus 172 ~~~~~ 176 (203)
T 1pjz_A 172 KVGGQ 176 (203)
T ss_dssp EEEES
T ss_pred Eeccc
Confidence 65543
No 17
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.56 E-value=1.5e-14 Score=136.29 Aligned_cols=123 Identities=15% Similarity=0.060 Sum_probs=93.9
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCC--CCCCCccchheecccccCccChh
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRV--PFFDNTLDLIHTTRFLDGWIDFV 404 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~L--PFpd~SFDlV~ss~vL~h~~d~~ 404 (480)
.+|||||||+|.++..+++.+..+++++++ +.+...+.+. +.+...+...+ |+++++||+|++..+++|+.++.
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s---~~~~~~a~~~-~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~~~ 118 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEEGIESIGVDIN---EDMIKFCEGK-FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDPER 118 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHHTCCEEEECSC---HHHHHHHHTT-SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCGGG
T ss_pred CeEEEEeCCCCHHHHHHHhCCCcEEEEECC---HHHHHHHHhh-cceeeccHHHHhhhcCCCCeeEEEECCchhhCCcHH
Confidence 479999999999999999988888888865 3444445554 55555555554 89999999999999999987543
Q ss_pred cHHHHHHHHHhcccCCcEEEEeeccCCh----------------hhHHHHHHHHHHcCceeeEEEE
Q 046488 405 LLDFILYDWDRVLRPGGLLWIDSFFCAK----------------EDMNDYLEVFKMLKYKKHKWVV 454 (480)
Q Consensus 405 ~l~~~L~EI~RVLKPGG~fiI~~f~~~~----------------edL~~~~~~l~~lGfkkl~W~~ 454 (480)
+..++.++.|+|||||++++....... -..+.+..++++.||+.+....
T Consensus 119 -~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~ 183 (240)
T 3dli_A 119 -LFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIEF 183 (240)
T ss_dssp -HHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEEE
T ss_pred -HHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEEE
Confidence 367999999999999999987432211 1135677899999999776544
No 18
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.56 E-value=2.6e-14 Score=133.42 Aligned_cols=121 Identities=15% Similarity=0.052 Sum_probs=94.2
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhC----CCCeeeecccCCCCCCCccchheecccccCccC
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRG----LVPLYITINQRVPFFDNTLDLIHTTRFLDGWID 402 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rg----lip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d 402 (480)
.+|||+|||+|.++..+++++..+++++++ +.....+.+. .+.+..++...+|+++++||+|++..+++|+.+
T Consensus 55 ~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s---~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~ 131 (242)
T 3l8d_A 55 AEVLDVGCGDGYGTYKLSRTGYKAVGVDIS---EVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTEE 131 (242)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEEESC---HHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSSC
T ss_pred CeEEEEcCCCCHHHHHHHHcCCeEEEEECC---HHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhccC
Confidence 389999999999999999999999998876 3333344443 234556778889999999999999999999876
Q ss_pred hhcHHHHHHHHHhcccCCcEEEEeeccCCh-------------------hhHHHHHHHHHHcCceeeEEE
Q 046488 403 FVLLDFILYDWDRVLRPGGLLWIDSFFCAK-------------------EDMNDYLEVFKMLKYKKHKWV 453 (480)
Q Consensus 403 ~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~-------------------edL~~~~~~l~~lGfkkl~W~ 453 (480)
. ..++.++.|+|||||++++..+.... -....+..+++..||+.+...
T Consensus 132 ~---~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 198 (242)
T 3l8d_A 132 P---LRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGI 198 (242)
T ss_dssp H---HHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred H---HHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEee
Confidence 6 46999999999999999987432211 112467889999999987644
No 19
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.56 E-value=2.6e-14 Score=138.48 Aligned_cols=128 Identities=20% Similarity=0.165 Sum_probs=96.1
Q ss_pred CCCCCCCCeEEEECCCCcHHHHHHhhC-CCEEEEEecCCChhHHH----HHHHhCC---CCeeeecccCCCCCCCccchh
Q 046488 320 DIKPGEIRIGLDFSIGTGTFAARMREF-NVTLVSAIINLGAPFNE----MIALRGL---VPLYITINQRVPFFDNTLDLI 391 (480)
Q Consensus 320 ~l~~g~iR~VLDVGCGtG~fAa~Lae~-gV~Vv~vd~d~~~~~~~----~iA~rgl---ip~~~~~ae~LPFpd~SFDlV 391 (480)
.+.++ .+|||||||+|.++..+++. +..+++++++. .+.. .....+. +.+..++...+|+++++||+|
T Consensus 79 ~~~~~--~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v 154 (297)
T 2o57_A 79 VLQRQ--AKGLDLGAGYGGAARFLVRKFGVSIDCLNIAP--VQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFI 154 (297)
T ss_dssp CCCTT--CEEEEETCTTSHHHHHHHHHHCCEEEEEESCH--HHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEE
T ss_pred CCCCC--CEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCH--HHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEE
Confidence 45544 48999999999999999987 88888888752 2222 2222332 445667788899999999999
Q ss_pred eecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCCh-------------------hhHHHHHHHHHHcCceeeEE
Q 046488 392 HTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK-------------------EDMNDYLEVFKMLKYKKHKW 452 (480)
Q Consensus 392 ~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~-------------------edL~~~~~~l~~lGfkkl~W 452 (480)
++..+++|+.+. ..++.|+.|+|||||++++..+.... .....+.++++..||+.+..
T Consensus 155 ~~~~~l~~~~~~---~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 231 (297)
T 2o57_A 155 WSQDAFLHSPDK---LKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRT 231 (297)
T ss_dssp EEESCGGGCSCH---HHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEE
T ss_pred EecchhhhcCCH---HHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEE
Confidence 999999999875 57999999999999999987532211 02345678899999987765
Q ss_pred EE
Q 046488 453 VV 454 (480)
Q Consensus 453 ~~ 454 (480)
..
T Consensus 232 ~~ 233 (297)
T 2o57_A 232 FS 233 (297)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 20
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.56 E-value=5.9e-14 Score=129.95 Aligned_cols=145 Identities=10% Similarity=0.003 Sum_probs=100.0
Q ss_pred CeEEEECCCCcHHHHHHhhCC--CEEEEEecCCChhHHHHHHHhC------------CCCeeeecccCCCCCCCccchhe
Q 046488 327 RIGLDFSIGTGTFAARMREFN--VTLVSAIINLGAPFNEMIALRG------------LVPLYITINQRVPFFDNTLDLIH 392 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~g--V~Vv~vd~d~~~~~~~~iA~rg------------lip~~~~~ae~LPFpd~SFDlV~ 392 (480)
.+|||+|||+|.++..+++++ ..+++++++. .+.. .+.+. .+.+..++...+++++++||+|+
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~--~~~~-~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 31 KKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSY--SVLE-RAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp CEEEEETCTTCHHHHHHHTSTTCCEEEEEESCH--HHHH-HHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred CEEEEecCCCCHHHHHHHhcCCCCEEEEEECCH--HHHH-HHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 489999999999999999875 6888888762 2322 22221 34556666778888899999999
Q ss_pred ecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccC----------------------ChhhHHH-HHHHHHHcCcee
Q 046488 393 TTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFC----------------------AKEDMND-YLEVFKMLKYKK 449 (480)
Q Consensus 393 ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~----------------------~~edL~~-~~~~l~~lGfkk 449 (480)
+..+++|+.++. +..++.++.|+|||||++++..... ..+++.. +..++++.||+.
T Consensus 108 ~~~~l~~~~~~~-~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v 186 (219)
T 3jwg_A 108 VIEVIEHLDENR-LQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSV 186 (219)
T ss_dssp EESCGGGCCHHH-HHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEE
T ss_pred EHHHHHhCCHHH-HHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEE
Confidence 999999986553 3579999999999999776652110 1223332 337888889965
Q ss_pred eEEEEeeccCCCCcceeEEEEEEeCCC
Q 046488 450 HKWVVVPKRDKDDREVFFSAVLEKPPR 476 (480)
Q Consensus 450 l~W~~~~k~d~~~~E~~lsav~qKP~~ 476 (480)
..-.++.. +...+.....||+.|-..
T Consensus 187 ~~~~~g~~-~~~~g~~~qi~~~~~~~~ 212 (219)
T 3jwg_A 187 RFLQIGEI-DDEFGSPTQMGVFTLGAG 212 (219)
T ss_dssp EEEEESCC-CTTSCCSEEEEEEEECC-
T ss_pred EEEecCCc-cccCCCCeEEEEEeccCC
Confidence 44333332 223445567888988653
No 21
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.55 E-value=2.1e-14 Score=135.77 Aligned_cols=96 Identities=13% Similarity=0.073 Sum_probs=77.5
Q ss_pred CCeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChhHHHHHHHh---CCCCeeeecccCCCCCCCccchheecccccCcc
Q 046488 326 IRIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNEMIALR---GLVPLYITINQRVPFFDNTLDLIHTTRFLDGWI 401 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~~~~~iA~r---glip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~ 401 (480)
..+|||+|||+|.++..+++.+. .+++++++. .+...+..+ ..+.+..++++.+|+++++||+|++..+++|+.
T Consensus 45 ~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 122 (253)
T 3g5l_A 45 QKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSE--RMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYIA 122 (253)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCH--HHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGCS
T ss_pred CCEEEEECCCCCHHHHHHHHcCCCEEEEEECCH--HHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhhh
Confidence 35899999999999999999887 888888652 333333332 134456677888999999999999999999986
Q ss_pred ChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 402 DFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 402 d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
+. ..++.++.|+|||||++++.
T Consensus 123 ~~---~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 123 SF---DDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp CH---HHHHHHHHHHEEEEEEEEEE
T ss_pred hH---HHHHHHHHHHcCCCcEEEEE
Confidence 65 57999999999999999986
No 22
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.55 E-value=4.8e-14 Score=134.55 Aligned_cols=131 Identities=25% Similarity=0.336 Sum_probs=96.9
Q ss_pred hcCCCCCCCCeEEEECCCCcHHHHHHhhC-CCEEEEEecCCChhHHH----HHHHhCC---CCeeeecccCCCCCCCccc
Q 046488 318 VLDIKPGEIRIGLDFSIGTGTFAARMREF-NVTLVSAIINLGAPFNE----MIALRGL---VPLYITINQRVPFFDNTLD 389 (480)
Q Consensus 318 vL~l~~g~iR~VLDVGCGtG~fAa~Lae~-gV~Vv~vd~d~~~~~~~----~iA~rgl---ip~~~~~ae~LPFpd~SFD 389 (480)
.+++.++ .+|||||||+|.++..++++ +..+++++++. .+.. .+...+. +.+..++.+.+|+++++||
T Consensus 56 ~~~~~~~--~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD 131 (273)
T 3bus_A 56 LLDVRSG--DRVLDVGCGIGKPAVRLATARDVRVTGISISR--PQVNQANARATAAGLANRVTFSYADAMDLPFEDASFD 131 (273)
T ss_dssp HSCCCTT--CEEEEESCTTSHHHHHHHHHSCCEEEEEESCH--HHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEE
T ss_pred hcCCCCC--CEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCH--HHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCcc
Confidence 3445444 48999999999999999874 78888888753 2222 2222232 4455677888999999999
Q ss_pred hheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCCh----------------------hhHHHHHHHHHHcCc
Q 046488 390 LIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK----------------------EDMNDYLEVFKMLKY 447 (480)
Q Consensus 390 lV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~----------------------edL~~~~~~l~~lGf 447 (480)
+|++..+++|+.+. ..++.++.|+|||||++++..+.... ...+.+..++++.||
T Consensus 132 ~v~~~~~l~~~~~~---~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 208 (273)
T 3bus_A 132 AVWALESLHHMPDR---GRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAEL 208 (273)
T ss_dssp EEEEESCTTTSSCH---HHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTC
T ss_pred EEEEechhhhCCCH---HHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCC
Confidence 99999999998776 46999999999999999987533210 012457788999999
Q ss_pred eeeEEEEe
Q 046488 448 KKHKWVVV 455 (480)
Q Consensus 448 kkl~W~~~ 455 (480)
+.+.+...
T Consensus 209 ~~~~~~~~ 216 (273)
T 3bus_A 209 VVTSTVDI 216 (273)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEC
Confidence 98776553
No 23
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.54 E-value=2.7e-14 Score=134.74 Aligned_cols=128 Identities=18% Similarity=0.146 Sum_probs=93.6
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhC-CCEEEEEecCCChhHHH----HHHHhCC---CCeeeecccCCCCCCCcc
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREF-NVTLVSAIINLGAPFNE----MIALRGL---VPLYITINQRVPFFDNTL 388 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~-gV~Vv~vd~d~~~~~~~----~iA~rgl---ip~~~~~ae~LPFpd~SF 388 (480)
+.+.+.++ .+|||||||+|.++..+++. +..+++++++. .+.. .++..+. +.+..++++.+|+ +++|
T Consensus 30 ~~~~~~~~--~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~--~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~f 104 (256)
T 1nkv_A 30 RVLRMKPG--TRILDLGSGSGEMLCTWARDHGITGTGIDMSS--LFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKC 104 (256)
T ss_dssp HHTCCCTT--CEEEEETCTTCHHHHHHHHHTCCEEEEEESCH--HHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCE
T ss_pred HhcCCCCC--CEEEEECCCCCHHHHHHHHhcCCeEEEEeCCH--HHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCC
Confidence 44555555 38999999999999999876 77888888652 3322 2222332 4455677888888 8999
Q ss_pred chheecccccCccChhcHHHHHHHHHhcccCCcEEEEee--ccCCh-----------------hhHHHHHHHHHHcCcee
Q 046488 389 DLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS--FFCAK-----------------EDMNDYLEVFKMLKYKK 449 (480)
Q Consensus 389 DlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~--f~~~~-----------------edL~~~~~~l~~lGfkk 449 (480)
|+|++..+++|+.+. ..+|.|+.|+|||||++++.. +.... .....+..+++..||+.
T Consensus 105 D~V~~~~~~~~~~~~---~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 181 (256)
T 1nkv_A 105 DVAACVGATWIAGGF---AGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDV 181 (256)
T ss_dssp EEEEEESCGGGTSSS---HHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCC
T ss_pred CEEEECCChHhcCCH---HHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCee
Confidence 999999999888765 469999999999999999864 21110 01356788999999987
Q ss_pred eEE
Q 046488 450 HKW 452 (480)
Q Consensus 450 l~W 452 (480)
+..
T Consensus 182 ~~~ 184 (256)
T 1nkv_A 182 VEM 184 (256)
T ss_dssp CEE
T ss_pred EEE
Confidence 653
No 24
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.54 E-value=4.6e-14 Score=137.77 Aligned_cols=100 Identities=15% Similarity=0.108 Sum_probs=74.5
Q ss_pred CCCCCCCeEEEECCCCcHHHHHHhhC----CCEEEEEecCCChhHHHHHH----HhCC---CCeeeecccCCCCCCCccc
Q 046488 321 IKPGEIRIGLDFSIGTGTFAARMREF----NVTLVSAIINLGAPFNEMIA----LRGL---VPLYITINQRVPFFDNTLD 389 (480)
Q Consensus 321 l~~g~iR~VLDVGCGtG~fAa~Lae~----gV~Vv~vd~d~~~~~~~~iA----~rgl---ip~~~~~ae~LPFpd~SFD 389 (480)
++++. +|||+|||||.++..|+++ |+.++++|++ ..+.+.+. ..+. +.+..+++..+|++ .||
T Consensus 68 ~~~~~--~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s--~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d 141 (261)
T 4gek_A 68 VQPGT--QVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNS--PAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NAS 141 (261)
T ss_dssp CCTTC--EEEEETCTTTHHHHHHHHTCCSSSCEEEEEESC--HHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEE
T ss_pred CCCCC--EEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECC--HHHHHHHHHHHHhhccCceEEEeeccccccccc--ccc
Confidence 45554 8999999999999999875 6788888865 23333221 1222 33455677788874 599
Q ss_pred hheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 390 LIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 390 lV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
+|++..+++|+.+.+ ...+|.|++|+|||||+|++.+
T Consensus 142 ~v~~~~~l~~~~~~~-~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 142 MVVLNFTLQFLEPSE-RQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp EEEEESCGGGSCHHH-HHHHHHHHHHHEEEEEEEEEEE
T ss_pred cceeeeeeeecCchh-HhHHHHHHHHHcCCCcEEEEEe
Confidence 999999998876543 3679999999999999999874
No 25
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.54 E-value=6.6e-14 Score=128.37 Aligned_cols=122 Identities=16% Similarity=0.151 Sum_probs=90.3
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCC---CCCCCc-cchheecccccCccC
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRV---PFFDNT-LDLIHTTRFLDGWID 402 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~L---PFpd~S-FDlV~ss~vL~h~~d 402 (480)
.+|||+|||+|.++..+++++..+++++++ ..+......+..+.........+ |+.++. ||+|++..+++ +.+
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~~~ 130 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADRGIEAVGVDGD--RTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-HQD 130 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTTTCEEEEEESC--HHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-SSC
T ss_pred CEEEEeCCCCCHHHHHHHHCCCEEEEEcCC--HHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh-hhh
Confidence 589999999999999999999899998875 23444444444455555554444 665554 99999999988 544
Q ss_pred hhcHHHHHHHHHhcccCCcEEEEeeccCC-------------------h----------hhHHHHHHHHHHcCceeeEEE
Q 046488 403 FVLLDFILYDWDRVLRPGGLLWIDSFFCA-------------------K----------EDMNDYLEVFKMLKYKKHKWV 453 (480)
Q Consensus 403 ~~~l~~~L~EI~RVLKPGG~fiI~~f~~~-------------------~----------edL~~~~~~l~~lGfkkl~W~ 453 (480)
. ..++.++.|+|||||++++..+... . ...+.+.++++..||+.+...
T Consensus 131 ~---~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 207 (227)
T 3e8s_A 131 I---IELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVSLQ 207 (227)
T ss_dssp C---HHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEEE
T ss_pred H---HHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEEEe
Confidence 4 5699999999999999998743110 0 135678899999999988765
Q ss_pred E
Q 046488 454 V 454 (480)
Q Consensus 454 ~ 454 (480)
.
T Consensus 208 ~ 208 (227)
T 3e8s_A 208 E 208 (227)
T ss_dssp C
T ss_pred c
Confidence 4
No 26
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.54 E-value=4.7e-14 Score=127.40 Aligned_cols=107 Identities=16% Similarity=0.129 Sum_probs=79.6
Q ss_pred HHHhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHH----HHHHhC--CCCeeeecccCCCCCCCcc
Q 046488 315 IPEVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNE----MIALRG--LVPLYITINQRVPFFDNTL 388 (480)
Q Consensus 315 I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~----~iA~rg--lip~~~~~ae~LPFpd~SF 388 (480)
+.+.++..++ .+|||+|||+|.++..+++.+..+++++++. .+.. .+...+ .+.+..++...+|+ +++|
T Consensus 24 l~~~~~~~~~--~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~ 98 (199)
T 2xvm_A 24 VLEAVKVVKP--GKTLDLGCGNGRNSLYLAANGYDVDAWDKNA--MSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQY 98 (199)
T ss_dssp HHHHTTTSCS--CEEEEETCTTSHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCE
T ss_pred HHHHhhccCC--CeEEEEcCCCCHHHHHHHHCCCeEEEEECCH--HHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCc
Confidence 3345554444 3899999999999999999988898888753 2222 222233 24455566777888 8999
Q ss_pred chheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 389 DLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 389 DlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
|+|++..+++|+.+. ....++.++.|+|||||++++..
T Consensus 99 D~v~~~~~l~~~~~~-~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 99 DFILSTVVLMFLEAK-TIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp EEEEEESCGGGSCGG-GHHHHHHHHHHTEEEEEEEEEEE
T ss_pred eEEEEcchhhhCCHH-HHHHHHHHHHHhcCCCeEEEEEE
Confidence 999999999887633 23679999999999999988764
No 27
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.54 E-value=3.2e-14 Score=126.48 Aligned_cols=123 Identities=19% Similarity=0.221 Sum_probs=88.9
Q ss_pred cCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHh-CCCCeeeecccCCCCCCCccchheecccc
Q 046488 319 LDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALR-GLVPLYITINQRVPFFDNTLDLIHTTRFL 397 (480)
Q Consensus 319 L~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~r-glip~~~~~ae~LPFpd~SFDlV~ss~vL 397 (480)
+++.++ .+|||+|||+|.++..+++.+..+++++++ ..+......+ ..+.+..++ +|+++++||+|++..++
T Consensus 13 ~~~~~~--~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s--~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~l 85 (170)
T 3i9f_A 13 IFEGKK--GVIVDYGCGNGFYCKYLLEFATKLYCIDIN--VIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFANSF 85 (170)
T ss_dssp HHSSCC--EEEEEETCTTCTTHHHHHTTEEEEEEECSC--HHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEESCS
T ss_pred cCcCCC--CeEEEECCCCCHHHHHHHhhcCeEEEEeCC--HHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEccch
Confidence 344444 489999999999999999986577777765 2333333332 223333333 88999999999999999
Q ss_pred cCccChhcHHHHHHHHHhcccCCcEEEEeeccCChh----------hHHHHHHHHHHcCceeeEEE
Q 046488 398 DGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKE----------DMNDYLEVFKMLKYKKHKWV 453 (480)
Q Consensus 398 ~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~e----------dL~~~~~~l~~lGfkkl~W~ 453 (480)
+|+.+. ..++.++.|+|||||++++..+..... ..+.+.++++ ||+.+...
T Consensus 86 ~~~~~~---~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~ 146 (170)
T 3i9f_A 86 HDMDDK---QHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRF 146 (170)
T ss_dssp TTCSCH---HHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEE
T ss_pred hcccCH---HHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEcc
Confidence 998765 569999999999999999986544321 1345667776 88876543
No 28
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.53 E-value=6e-14 Score=128.44 Aligned_cols=128 Identities=15% Similarity=0.029 Sum_probs=95.2
Q ss_pred CCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHh-CC--CCeeeecccCCCCCCCccchheecccc
Q 046488 321 IKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALR-GL--VPLYITINQRVPFFDNTLDLIHTTRFL 397 (480)
Q Consensus 321 l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~r-gl--ip~~~~~ae~LPFpd~SFDlV~ss~vL 397 (480)
+.++. +|||+|||+|.++..+++.+..+++++++ +.....+.+ +. +.+..++...+ +++++||+|++..++
T Consensus 44 ~~~~~--~vLdiG~G~G~~~~~l~~~~~~v~~~D~s---~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l 117 (218)
T 3ou2_A 44 GNIRG--DVLELASGTGYWTRHLSGLADRVTALDGS---AEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAHWL 117 (218)
T ss_dssp TTSCS--EEEEESCTTSHHHHHHHHHSSEEEEEESC---HHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEESCG
T ss_pred CCCCC--eEEEECCCCCHHHHHHHhcCCeEEEEeCC---HHHHHHHHhcCCCCeEEEecccccC-CCCCceeEEEEechh
Confidence 54443 89999999999999999988899998875 233333333 31 33455666677 889999999999999
Q ss_pred cCccChhcHHHHHHHHHhcccCCcEEEEeeccCCh-------------------------------hhHHHHHHHHHHcC
Q 046488 398 DGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK-------------------------------EDMNDYLEVFKMLK 446 (480)
Q Consensus 398 ~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~-------------------------------edL~~~~~~l~~lG 446 (480)
+|+.++. +..++.++.|+|||||++++..+.... ...+.+.++++..|
T Consensus 118 ~~~~~~~-~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 196 (218)
T 3ou2_A 118 AHVPDDR-FEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALG 196 (218)
T ss_dssp GGSCHHH-HHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTT
T ss_pred hcCCHHH-HHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCC
Confidence 9987642 367999999999999999987432210 12356788999999
Q ss_pred ceeeEEEEe
Q 046488 447 YKKHKWVVV 455 (480)
Q Consensus 447 fkkl~W~~~ 455 (480)
|+...|...
T Consensus 197 f~v~~~~~~ 205 (218)
T 3ou2_A 197 WSCSVDEVH 205 (218)
T ss_dssp EEEEEEEEE
T ss_pred CEEEeeecc
Confidence 996666653
No 29
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.53 E-value=8e-14 Score=131.38 Aligned_cols=140 Identities=16% Similarity=0.082 Sum_probs=98.7
Q ss_pred hhHHHhcCCCC--CCCCeEEEECCCCcHHHHHHhhCC-CEEEEEecCCChhHHHHHHHhCC-------CCeeeecccCCC
Q 046488 313 FLIPEVLDIKP--GEIRIGLDFSIGTGTFAARMREFN-VTLVSAIINLGAPFNEMIALRGL-------VPLYITINQRVP 382 (480)
Q Consensus 313 ~~I~~vL~l~~--g~iR~VLDVGCGtG~fAa~Lae~g-V~Vv~vd~d~~~~~~~~iA~rgl-------ip~~~~~ae~LP 382 (480)
.++..++.... ....+|||||||+|.++..|++++ ..+++++++. .+.. .+.+.. +.+..++...++
T Consensus 65 ~~~~~l~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~--~~~~-~a~~~~~~~~~~~~~~~~~d~~~~~ 141 (241)
T 2ex4_A 65 KFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPLFREVDMVDITE--DFLV-QAKTYLGEEGKRVRNYFCCGLQDFT 141 (241)
T ss_dssp HHHHGGGC----CCCCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCH--HHHH-HHHHHTGGGGGGEEEEEECCGGGCC
T ss_pred HHHHHHHHhcccCCCCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCH--HHHH-HHHHHhhhcCCceEEEEEcChhhcC
Confidence 34555554321 124589999999999999998874 4788887652 3333 222221 334556678889
Q ss_pred CCCCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCCh------------hhHHHHHHHHHHcCceee
Q 046488 383 FFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK------------EDMNDYLEVFKMLKYKKH 450 (480)
Q Consensus 383 Fpd~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~------------edL~~~~~~l~~lGfkkl 450 (480)
+++++||+|++..+++|+.++. +..++.++.|+|||||++++..+.... ...+.+.++++..||+.+
T Consensus 142 ~~~~~fD~v~~~~~l~~~~~~~-~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~ 220 (241)
T 2ex4_A 142 PEPDSYDVIWIQWVIGHLTDQH-LAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLL 220 (241)
T ss_dssp CCSSCEEEEEEESCGGGSCHHH-HHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEE
T ss_pred CCCCCEEEEEEcchhhhCCHHH-HHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEE
Confidence 9999999999999999887643 357999999999999999996532211 135678889999999988
Q ss_pred EEEEee
Q 046488 451 KWVVVP 456 (480)
Q Consensus 451 ~W~~~~ 456 (480)
.+....
T Consensus 221 ~~~~~~ 226 (241)
T 2ex4_A 221 AEERQE 226 (241)
T ss_dssp EEEECC
T ss_pred EeeecC
Confidence 766543
No 30
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.53 E-value=6.6e-14 Score=130.51 Aligned_cols=132 Identities=13% Similarity=0.070 Sum_probs=98.5
Q ss_pred HHHhcCCCCCCCCeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChhHHHHHHHhCC----CCeeeecccCCCCCCCccc
Q 046488 315 IPEVLDIKPGEIRIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNEMIALRGL----VPLYITINQRVPFFDNTLD 389 (480)
Q Consensus 315 I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~~~~~iA~rgl----ip~~~~~ae~LPFpd~SFD 389 (480)
+...++..++ .+|||+|||+|.++..+++++. .+++++++ +.....+.+.. +.+..++...+|+++++||
T Consensus 35 l~~~~~~~~~--~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s---~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD 109 (243)
T 3bkw_A 35 LRAMLPEVGG--LRIVDLGCGFGWFCRWAHEHGASYVLGLDLS---EKMLARARAAGPDTGITYERADLDKLHLPQDSFD 109 (243)
T ss_dssp HHHHSCCCTT--CEEEEETCTTCHHHHHHHHTTCSEEEEEESC---HHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEE
T ss_pred HHHhccccCC--CEEEEEcCcCCHHHHHHHHCCCCeEEEEcCC---HHHHHHHHHhcccCCceEEEcChhhccCCCCCce
Confidence 4455554444 4899999999999999999887 88888875 33333344332 3445566778899999999
Q ss_pred hheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccC------C---------------h----------------
Q 046488 390 LIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFC------A---------------K---------------- 432 (480)
Q Consensus 390 lV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~------~---------------~---------------- 432 (480)
+|++..+++|+.+. ..++.++.|+|||||++++..... . .
T Consensus 110 ~v~~~~~l~~~~~~---~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (243)
T 3bkw_A 110 LAYSSLALHYVEDV---ARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKG 186 (243)
T ss_dssp EEEEESCGGGCSCH---HHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHS
T ss_pred EEEEeccccccchH---HHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCc
Confidence 99999999988765 579999999999999999863100 0 0
Q ss_pred -----hhHHHHHHHHHHcCceeeEEEE
Q 046488 433 -----EDMNDYLEVFKMLKYKKHKWVV 454 (480)
Q Consensus 433 -----edL~~~~~~l~~lGfkkl~W~~ 454 (480)
...+.+..+++..||+.+.+..
T Consensus 187 ~~~~~~t~~~~~~~l~~aGF~~~~~~~ 213 (243)
T 3bkw_A 187 VVKHHRTVGTTLNALIRSGFAIEHVEE 213 (243)
T ss_dssp CCEEECCHHHHHHHHHHTTCEEEEEEE
T ss_pred eEEEeccHHHHHHHHHHcCCEeeeecc
Confidence 0246688999999999887654
No 31
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.53 E-value=3.4e-14 Score=133.62 Aligned_cols=127 Identities=14% Similarity=0.046 Sum_probs=92.7
Q ss_pred CCeEEEECCCCcHHHHHHhhCC-CEEEEEecCCChhHHHHHHHh----CCCCeeeecccCCCCCCCccchheecccccCc
Q 046488 326 IRIGLDFSIGTGTFAARMREFN-VTLVSAIINLGAPFNEMIALR----GLVPLYITINQRVPFFDNTLDLIHTTRFLDGW 400 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~g-V~Vv~vd~d~~~~~~~~iA~r----glip~~~~~ae~LPFpd~SFDlV~ss~vL~h~ 400 (480)
..+|||||||+|.++..+++++ ..+++++++ ..+...+..+ ..+.+..++.+.+|+++++||+|++..+++|+
T Consensus 94 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 171 (254)
T 1xtp_A 94 TSRALDCGAGIGRITKNLLTKLYATTDLLEPV--KHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIYL 171 (254)
T ss_dssp CSEEEEETCTTTHHHHHTHHHHCSEEEEEESC--HHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGGS
T ss_pred CCEEEEECCCcCHHHHHHHHhhcCEEEEEeCC--HHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhhhC
Confidence 4589999999999999998874 457777765 2333322222 12344556677899999999999999999998
Q ss_pred cChhcHHHHHHHHHhcccCCcEEEEeeccCCh-------------hhHHHHHHHHHHcCceeeEEEEe
Q 046488 401 IDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK-------------EDMNDYLEVFKMLKYKKHKWVVV 455 (480)
Q Consensus 401 ~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~-------------edL~~~~~~l~~lGfkkl~W~~~ 455 (480)
.+.+ +..++.++.|+|||||++++..+.... ...+.+.++++..||+.+.....
T Consensus 172 ~~~~-~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 238 (254)
T 1xtp_A 172 TDAD-FVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAFQ 238 (254)
T ss_dssp CHHH-HHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEEC
T ss_pred CHHH-HHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeeec
Confidence 6432 367999999999999999997532111 12356888999999998876554
No 32
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.53 E-value=4.1e-14 Score=136.44 Aligned_cols=149 Identities=11% Similarity=0.040 Sum_probs=95.7
Q ss_pred CCeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChhHHHHHHH---hC--C-----------------------------
Q 046488 326 IRIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNEMIAL---RG--L----------------------------- 370 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~~~~~iA~---rg--l----------------------------- 370 (480)
..+|||||||+|.++..++..++ .++++|++. .+...+.+ .. .
T Consensus 56 g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~--~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 56 GDTLIDIGSGPTIYQVLAACDSFQDITLSDFTD--RNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp EEEEEESSCTTCCGGGTTGGGTEEEEEEEESCH--HHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CceEEEeCCCccHHHHHHHHhhhcceeeccccH--HHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 35899999999999888877776 477777652 22221111 00 0
Q ss_pred -CC-eeeecccC-CCCC---CCccchheecccccCcc-ChhcHHHHHHHHHhcccCCcEEEEeeccCCh-----------
Q 046488 371 -VP-LYITINQR-VPFF---DNTLDLIHTTRFLDGWI-DFVLLDFILYDWDRVLRPGGLLWIDSFFCAK----------- 432 (480)
Q Consensus 371 -ip-~~~~~ae~-LPFp---d~SFDlV~ss~vL~h~~-d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~----------- 432 (480)
+. +...+... .|++ +++||+|+++.+|+|+. +...+..++.+++|+|||||+|++..+....
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~ 213 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSC 213 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEEC
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeec
Confidence 11 33334333 4553 67999999999998863 3334467999999999999999998532210
Q ss_pred --hhHHHHHHHHHHcCceeeEEEEeec-cCC--CCcceeEEEEEEeCCC
Q 046488 433 --EDMNDYLEVFKMLKYKKHKWVVVPK-RDK--DDREVFFSAVLEKPPR 476 (480)
Q Consensus 433 --edL~~~~~~l~~lGfkkl~W~~~~k-~d~--~~~E~~lsav~qKP~~ 476 (480)
-..+.+.++++..||..+.+..... ... ...+.++..+.+|+..
T Consensus 214 ~~~~~~~l~~~l~~aGF~i~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~ 262 (263)
T 2a14_A 214 VALEKGEVEQAVLDAGFDIEQLLHSPQSYSVTNAANNGVCCIVARKKPG 262 (263)
T ss_dssp CCCCHHHHHHHHHHTTEEEEEEEEECCCCCTTTCCCCCEEEEEEEECC-
T ss_pred cccCHHHHHHHHHHCCCEEEEEeecccccccccCCCCceEEEEEEecCC
Confidence 1345688899999999887655321 111 1123455667899753
No 33
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.52 E-value=6.5e-14 Score=135.18 Aligned_cols=108 Identities=19% Similarity=0.101 Sum_probs=79.3
Q ss_pred HHHhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHH----hCC------CCeeeecccCCC--
Q 046488 315 IPEVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIAL----RGL------VPLYITINQRVP-- 382 (480)
Q Consensus 315 I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~----rgl------ip~~~~~ae~LP-- 382 (480)
+...++..++ .+|||||||+|.++..|++.+..+++++++. .+...+.+ ++. +.+..+....+|
T Consensus 49 l~~~l~~~~~--~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~--~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 124 (293)
T 3thr_A 49 LLGLLRQHGC--HRVLDVACGTGVDSIMLVEEGFSVTSVDASD--KMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKD 124 (293)
T ss_dssp HHHHHHHTTC--CEEEETTCTTSHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHH
T ss_pred HHHHhcccCC--CEEEEecCCCCHHHHHHHHCCCeEEEEECCH--HHHHHHHHhhhhcccccccceeeEeecChhhCccc
Confidence 3344444433 4899999999999999999999999988763 33222211 111 223445566777
Q ss_pred -CCCCccchheec-ccccCccC----hhcHHHHHHHHHhcccCCcEEEEe
Q 046488 383 -FFDNTLDLIHTT-RFLDGWID----FVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 383 -Fpd~SFDlV~ss-~vL~h~~d----~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
+++++||+|+|. .+++|+.+ ......++.++.|+|||||++++.
T Consensus 125 ~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 125 VPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp SCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred cccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 899999999998 89999887 233467999999999999999976
No 34
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.52 E-value=1.5e-13 Score=126.24 Aligned_cols=123 Identities=15% Similarity=0.126 Sum_probs=94.8
Q ss_pred CCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhCCCCeeeecccC--CCCCCCccchheecccccCccCh
Q 046488 326 IRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQR--VPFFDNTLDLIHTTRFLDGWIDF 403 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~--LPFpd~SFDlV~ss~vL~h~~d~ 403 (480)
..+|||+|||+|.++..+++.+..+++++++ +.....+.+....+..++.+. +|+++++||+|++..+++|+.+.
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~---~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~ 109 (230)
T 3cc8_A 33 WKEVLDIGCSSGALGAAIKENGTRVSGIEAF---PEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFDP 109 (230)
T ss_dssp CSEEEEETCTTSHHHHHHHTTTCEEEEEESS---HHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEESCGGGSSCH
T ss_pred CCcEEEeCCCCCHHHHHHHhcCCeEEEEeCC---HHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEECChhhhcCCH
Confidence 3589999999999999999888888888875 334445555555555566544 78889999999999999998776
Q ss_pred hcHHHHHHHHHhcccCCcEEEEeeccC----------------C-----------hhhHHHHHHHHHHcCceeeEEEE
Q 046488 404 VLLDFILYDWDRVLRPGGLLWIDSFFC----------------A-----------KEDMNDYLEVFKMLKYKKHKWVV 454 (480)
Q Consensus 404 ~~l~~~L~EI~RVLKPGG~fiI~~f~~----------------~-----------~edL~~~~~~l~~lGfkkl~W~~ 454 (480)
..++.++.|+|||||++++..... . .-..+.+.++++..||+.+.+..
T Consensus 110 ---~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 184 (230)
T 3cc8_A 110 ---WAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKVDR 184 (230)
T ss_dssp ---HHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred ---HHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEEEe
Confidence 469999999999999999863110 0 01245688899999999876554
No 35
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.52 E-value=9.7e-14 Score=133.83 Aligned_cols=130 Identities=14% Similarity=0.219 Sum_probs=95.9
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHh-CCCCeeeecccCCCCCCCccchheecc
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALR-GLVPLYITINQRVPFFDNTLDLIHTTR 395 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~r-glip~~~~~ae~LPFpd~SFDlV~ss~ 395 (480)
+.+.+.++ .+|||||||+|.++..+++.+..+++++++ ..+......+ ..+.+..++++.+|+ +++||+|++..
T Consensus 51 ~~l~~~~~--~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s--~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~ 125 (279)
T 3ccf_A 51 QLLNPQPG--EFILDLGCGTGQLTEKIAQSGAEVLGTDNA--ATMIEKARQNYPHLHFDVADARNFRV-DKPLDAVFSNA 125 (279)
T ss_dssp HHHCCCTT--CEEEEETCTTSHHHHHHHHTTCEEEEEESC--HHHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEEEEES
T ss_pred HHhCCCCC--CEEEEecCCCCHHHHHHHhCCCeEEEEECC--HHHHHHHHhhCCCCEEEECChhhCCc-CCCcCEEEEcc
Confidence 44455444 489999999999999999988899998875 2333333222 245667777888997 68999999999
Q ss_pred cccCccChhcHHHHHHHHHhcccCCcEEEEeeccCCh----------------------------hhHHHHHHHHHHcCc
Q 046488 396 FLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK----------------------------EDMNDYLEVFKMLKY 447 (480)
Q Consensus 396 vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~----------------------------edL~~~~~~l~~lGf 447 (480)
+++|+.+. ..++.|+.|+|||||++++..+.... ...+.+..+++..||
T Consensus 126 ~l~~~~d~---~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 202 (279)
T 3ccf_A 126 MLHWVKEP---EAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGF 202 (279)
T ss_dssp CGGGCSCH---HHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTE
T ss_pred hhhhCcCH---HHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcCC
Confidence 99988766 46999999999999999986432211 012446778888899
Q ss_pred eeeEEEE
Q 046488 448 KKHKWVV 454 (480)
Q Consensus 448 kkl~W~~ 454 (480)
+.+.+..
T Consensus 203 ~~~~~~~ 209 (279)
T 3ccf_A 203 DVTYAAL 209 (279)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 8766543
No 36
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.52 E-value=1.3e-13 Score=127.24 Aligned_cols=136 Identities=20% Similarity=0.210 Sum_probs=98.9
Q ss_pred hHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCCCCccchhee
Q 046488 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFDNTLDLIHT 393 (480)
Q Consensus 314 ~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFpd~SFDlV~s 393 (480)
++..+....++ .+|||+|||+|.++..++ ..+++++++.. .+.+..++++.+|+++++||+|++
T Consensus 58 ~~~~l~~~~~~--~~vLDiG~G~G~~~~~l~---~~v~~~D~s~~-----------~~~~~~~d~~~~~~~~~~fD~v~~ 121 (215)
T 2zfu_A 58 IARDLRQRPAS--LVVADFGCGDCRLASSIR---NPVHCFDLASL-----------DPRVTVCDMAQVPLEDESVDVAVF 121 (215)
T ss_dssp HHHHHHTSCTT--SCEEEETCTTCHHHHHCC---SCEEEEESSCS-----------STTEEESCTTSCSCCTTCEEEEEE
T ss_pred HHHHHhccCCC--CeEEEECCcCCHHHHHhh---ccEEEEeCCCC-----------CceEEEeccccCCCCCCCEeEEEE
Confidence 34434334333 479999999999999885 46777776642 355667778889999999999999
Q ss_pred cccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEEEEeeccCCCCcceeEEEEEEe
Q 046488 394 TRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKWVVVPKRDKDDREVFFSAVLEK 473 (480)
Q Consensus 394 s~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W~~~~k~d~~~~E~~lsav~qK 473 (480)
..+++ +.+. ..++.++.|+|||||++++..+.......+.+...++..||+.+..... ...+...+++|
T Consensus 122 ~~~l~-~~~~---~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~-------~~~~~~~~~~k 190 (215)
T 2zfu_A 122 CLSLM-GTNI---RDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDLT-------NSHFFLFDFQK 190 (215)
T ss_dssp ESCCC-SSCH---HHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHHHTTEEEEEEECC-------STTCEEEEEEE
T ss_pred ehhcc-ccCH---HHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHHHCCCEEEEEecC-------CCeEEEEEEEe
Confidence 99985 4443 5799999999999999999876543335567888999999987653221 22344567777
Q ss_pred CCC
Q 046488 474 PPR 476 (480)
Q Consensus 474 P~~ 476 (480)
+..
T Consensus 191 ~~~ 193 (215)
T 2zfu_A 191 TGP 193 (215)
T ss_dssp CSS
T ss_pred cCc
Confidence 644
No 37
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.52 E-value=5e-14 Score=135.98 Aligned_cols=124 Identities=20% Similarity=0.175 Sum_probs=93.0
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHH---H-hCC---CCeeeecccCCC-CCCCccchheeccccc
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIA---L-RGL---VPLYITINQRVP-FFDNTLDLIHTTRFLD 398 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA---~-rgl---ip~~~~~ae~LP-Fpd~SFDlV~ss~vL~ 398 (480)
.+|||||||+|.++..+++.+..+++++++. .+...+. . .+. +.+..++.+.++ +++++||+|++..+++
T Consensus 70 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~ 147 (285)
T 4htf_A 70 LRVLDAGGGEGQTAIKMAERGHQVILCDLSA--QMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLE 147 (285)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGG
T ss_pred CEEEEeCCcchHHHHHHHHCCCEEEEEECCH--HHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchhh
Confidence 5899999999999999999999999988762 2322221 1 122 335566677777 8899999999999999
Q ss_pred CccChhcHHHHHHHHHhcccCCcEEEEeeccCCh-------------------------------hhHHHHHHHHHHcCc
Q 046488 399 GWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK-------------------------------EDMNDYLEVFKMLKY 447 (480)
Q Consensus 399 h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~-------------------------------edL~~~~~~l~~lGf 447 (480)
|+.+. ..++.++.|+|||||++++..+.... -..+.+..+++..||
T Consensus 148 ~~~~~---~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf 224 (285)
T 4htf_A 148 WVADP---RSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGW 224 (285)
T ss_dssp GCSCH---HHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTC
T ss_pred cccCH---HHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCC
Confidence 98776 46999999999999999986431110 013567889999999
Q ss_pred eeeEEEEe
Q 046488 448 KKHKWVVV 455 (480)
Q Consensus 448 kkl~W~~~ 455 (480)
+.+.+...
T Consensus 225 ~v~~~~~~ 232 (285)
T 4htf_A 225 QIMGKTGV 232 (285)
T ss_dssp EEEEEEEE
T ss_pred ceeeeeeE
Confidence 98766543
No 38
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.52 E-value=5.2e-14 Score=131.34 Aligned_cols=99 Identities=16% Similarity=0.083 Sum_probs=76.8
Q ss_pred CCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHHHHHHh----CCCCeeeecccCCCCCCCccchheecccccC
Q 046488 326 IRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNEMIALR----GLVPLYITINQRVPFFDNTLDLIHTTRFLDG 399 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA~r----glip~~~~~ae~LPFpd~SFDlV~ss~vL~h 399 (480)
..+|||+|||+|.++..+++. +..+++++++. .+...+..+ +.+.+..++...+|++ ++||+|++..+++|
T Consensus 45 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~ 121 (234)
T 3dtn_A 45 NPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSE--KMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYDMVVSALSIHH 121 (234)
T ss_dssp SCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCH--HHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEEEEEEESCGGG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCH--HHHHHHHHhhccCCCEEEEeCchhccCCC-CCceEEEEeCcccc
Confidence 358999999999999999987 77888888752 333322222 1344556778888887 99999999999999
Q ss_pred ccChhcHHHHHHHHHhcccCCcEEEEeec
Q 046488 400 WIDFVLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 400 ~~d~~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
+.+.. ...++.++.|+|||||++++..+
T Consensus 122 ~~~~~-~~~~l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 122 LEDED-KKELYKRSYSILKESGIFINADL 149 (234)
T ss_dssp SCHHH-HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHH-HHHHHHHHHHhcCCCcEEEEEEe
Confidence 86553 24699999999999999998753
No 39
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.52 E-value=6.6e-14 Score=132.14 Aligned_cols=121 Identities=17% Similarity=0.262 Sum_probs=90.6
Q ss_pred CeEEEECCCCcHHHHHHhhCC-CEEEEEecCCChhHHH----HHHHhCC---CCeeeecccCCCCCCCccchheeccccc
Q 046488 327 RIGLDFSIGTGTFAARMREFN-VTLVSAIINLGAPFNE----MIALRGL---VPLYITINQRVPFFDNTLDLIHTTRFLD 398 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~g-V~Vv~vd~d~~~~~~~----~iA~rgl---ip~~~~~ae~LPFpd~SFDlV~ss~vL~ 398 (480)
.+|||+|||+|.++..+++.+ ..+++++++. .+.. .+...+. +.+..++.+.+|+++++||+|++..+++
T Consensus 48 ~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 125 (257)
T 3f4k_A 48 AKIADIGCGTGGQTLFLADYVKGQITGIDLFP--DFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAIY 125 (257)
T ss_dssp CEEEEETCTTSHHHHHHHHHCCSEEEEEESCH--HHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCSC
T ss_pred CeEEEeCCCCCHHHHHHHHhCCCeEEEEECCH--HHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChHh
Confidence 489999999999999999874 4888888752 2222 2222232 4455677889999999999999999998
Q ss_pred CccChhcHHHHHHHHHhcccCCcEEEEee--ccCCh----------------hhHHHHHHHHHHcCceeeEEE
Q 046488 399 GWIDFVLLDFILYDWDRVLRPGGLLWIDS--FFCAK----------------EDMNDYLEVFKMLKYKKHKWV 453 (480)
Q Consensus 399 h~~d~~~l~~~L~EI~RVLKPGG~fiI~~--f~~~~----------------edL~~~~~~l~~lGfkkl~W~ 453 (480)
|+ +. ..++.++.|+|||||++++.. |.... .....+.++++..||+.+...
T Consensus 126 ~~-~~---~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 194 (257)
T 3f4k_A 126 NI-GF---ERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAHF 194 (257)
T ss_dssp CC-CH---HHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEEE
T ss_pred hc-CH---HHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEEE
Confidence 88 44 569999999999999999875 22221 013457788999999877643
No 40
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.52 E-value=4.7e-14 Score=135.24 Aligned_cols=129 Identities=11% Similarity=0.152 Sum_probs=94.4
Q ss_pred HHhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhC-CCCeeeecccCCCCCCCccchheec
Q 046488 316 PEVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRG-LVPLYITINQRVPFFDNTLDLIHTT 394 (480)
Q Consensus 316 ~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rg-lip~~~~~ae~LPFpd~SFDlV~ss 394 (480)
.+.+++.++ .+|||||||+|.++..+++.+..+++++++ +.+...+.+. .+.+..++++.+|+++++||+|++.
T Consensus 27 ~~~~~~~~~--~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s---~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 101 (261)
T 3ege_A 27 INLLNLPKG--SVIADIGAGTGGYSVALANQGLFVYAVEPS---IVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVISI 101 (261)
T ss_dssp HHHHCCCTT--CEEEEETCTTSHHHHHHHTTTCEEEEECSC---HHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEE
T ss_pred HHHhCCCCC--CEEEEEcCcccHHHHHHHhCCCEEEEEeCC---HHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEEc
Confidence 344554444 489999999999999999988899998875 2222222222 3445567788899999999999999
Q ss_pred ccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCCh---------------------hhHHHHHHHHHHcCceeeEEE
Q 046488 395 RFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK---------------------EDMNDYLEVFKMLKYKKHKWV 453 (480)
Q Consensus 395 ~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~---------------------edL~~~~~~l~~lGfkkl~W~ 453 (480)
.+++|+.+. ..++.++.|+|| ||++++..+.... ...+.+. +++..||..+...
T Consensus 102 ~~l~~~~~~---~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~~ 176 (261)
T 3ege_A 102 LAIHHFSHL---EKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVEAI 176 (261)
T ss_dssp SCGGGCSSH---HHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEEEE
T ss_pred chHhhccCH---HHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCceeEE
Confidence 999999766 569999999999 9988776432110 0123466 8999999876544
Q ss_pred E
Q 046488 454 V 454 (480)
Q Consensus 454 ~ 454 (480)
.
T Consensus 177 ~ 177 (261)
T 3ege_A 177 P 177 (261)
T ss_dssp E
T ss_pred E
Confidence 3
No 41
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.51 E-value=9.4e-14 Score=132.84 Aligned_cols=122 Identities=18% Similarity=0.235 Sum_probs=91.6
Q ss_pred CeEEEECCCCcHHHHHHhhC-CCEEEEEecCCChhHHH----HHHHhCC---CCeeeecccCCCCCCCccchheeccccc
Q 046488 327 RIGLDFSIGTGTFAARMREF-NVTLVSAIINLGAPFNE----MIALRGL---VPLYITINQRVPFFDNTLDLIHTTRFLD 398 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~-gV~Vv~vd~d~~~~~~~----~iA~rgl---ip~~~~~ae~LPFpd~SFDlV~ss~vL~ 398 (480)
.+|||||||+|.++..+++. +..+++++++. .+.. .+...+. +.+..++.+.+|+++++||+|++..+++
T Consensus 48 ~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~ 125 (267)
T 3kkz_A 48 SLIADIGCGTGGQTMVLAGHVTGQVTGLDFLS--GFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAIY 125 (267)
T ss_dssp CEEEEETCTTCHHHHHHHTTCSSEEEEEESCH--HHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCGG
T ss_pred CEEEEeCCCCCHHHHHHHhccCCEEEEEeCCH--HHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCce
Confidence 58999999999999999987 44888888753 2222 2222232 4456677888999999999999999998
Q ss_pred CccChhcHHHHHHHHHhcccCCcEEEEeecc--CCh--h--------------hHHHHHHHHHHcCceeeEEEE
Q 046488 399 GWIDFVLLDFILYDWDRVLRPGGLLWIDSFF--CAK--E--------------DMNDYLEVFKMLKYKKHKWVV 454 (480)
Q Consensus 399 h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~--~~~--e--------------dL~~~~~~l~~lGfkkl~W~~ 454 (480)
|+ +. ..++.++.|+|||||++++.... ... . ....+.+++++.||+.+....
T Consensus 126 ~~-~~---~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 195 (267)
T 3kkz_A 126 NI-GF---ERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVATFI 195 (267)
T ss_dssp GT-CH---HHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEEEE
T ss_pred ec-CH---HHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEEE
Confidence 88 44 56999999999999999987522 111 0 134577889999999876544
No 42
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.51 E-value=1e-13 Score=136.48 Aligned_cols=122 Identities=12% Similarity=0.042 Sum_probs=93.1
Q ss_pred CeEEEECCCCcHHHHHHhhC-CCEEEEEecCCChhHHH----HHHHhC---CCCeeeecccCCCCCCCccchheeccccc
Q 046488 327 RIGLDFSIGTGTFAARMREF-NVTLVSAIINLGAPFNE----MIALRG---LVPLYITINQRVPFFDNTLDLIHTTRFLD 398 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~-gV~Vv~vd~d~~~~~~~----~iA~rg---lip~~~~~ae~LPFpd~SFDlV~ss~vL~ 398 (480)
.+|||+|||+|.++..++++ +..+++++++. .+.. .+...+ .+.+..++.+.+|+++++||+|++..+++
T Consensus 119 ~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 196 (312)
T 3vc1_A 119 DTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSA--AQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNESTM 196 (312)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCCEEEEEESCH--HHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCGG
T ss_pred CEEEEecCCCCHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCchh
Confidence 48999999999999999988 88999988752 2222 222233 24456677889999999999999999999
Q ss_pred CccChhcHHHHHHHHHhcccCCcEEEEeeccCCh--------------------hhHHHHHHHHHHcCceeeEEEE
Q 046488 399 GWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK--------------------EDMNDYLEVFKMLKYKKHKWVV 454 (480)
Q Consensus 399 h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~--------------------edL~~~~~~l~~lGfkkl~W~~ 454 (480)
|+ +. ..++.++.|+|||||++++..+.... ...+.+.+++++.||+.+....
T Consensus 197 ~~-~~---~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~ 268 (312)
T 3vc1_A 197 YV-DL---HDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIVD 268 (312)
T ss_dssp GS-CH---HHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEEE
T ss_pred hC-CH---HHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEEe
Confidence 88 43 57999999999999999987532221 0134577899999998776554
No 43
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.50 E-value=8.9e-14 Score=131.13 Aligned_cols=95 Identities=19% Similarity=0.249 Sum_probs=76.5
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHh-----CCCCeeeecccCCCCCCCccchheecccccCcc
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALR-----GLVPLYITINQRVPFFDNTLDLIHTTRFLDGWI 401 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~r-----glip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~ 401 (480)
.+|||+|||+|.++..+++++..+++++++. .+......+ ..+.+..++.+.+|+++++||+|++..+++|+.
T Consensus 41 ~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 118 (263)
T 2yqz_A 41 PVFLELGVGTGRIALPLIARGYRYIALDADA--AMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWHLVP 118 (263)
T ss_dssp CEEEEETCTTSTTHHHHHTTTCEEEEEESCH--HHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGGCT
T ss_pred CEEEEeCCcCCHHHHHHHHCCCEEEEEECCH--HHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchhhcC
Confidence 4899999999999999999888898988762 333332222 123455667888999999999999999998887
Q ss_pred ChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 402 DFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 402 d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
+. ..++.++.|+|||||++++.
T Consensus 119 ~~---~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 119 DW---PKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp TH---HHHHHHHHHHEEEEEEEEEE
T ss_pred CH---HHHHHHHHHHCCCCcEEEEE
Confidence 65 46999999999999999886
No 44
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.49 E-value=1.7e-13 Score=125.25 Aligned_cols=147 Identities=16% Similarity=0.111 Sum_probs=99.4
Q ss_pred CeEEEECCCCcHH-HHHHhhCCCEEEEEecCCChhHHHH----HHHhC-CCCeeeecccCCCCCCCccchheecccccCc
Q 046488 327 RIGLDFSIGTGTF-AARMREFNVTLVSAIINLGAPFNEM----IALRG-LVPLYITINQRVPFFDNTLDLIHTTRFLDGW 400 (480)
Q Consensus 327 R~VLDVGCGtG~f-Aa~Lae~gV~Vv~vd~d~~~~~~~~----iA~rg-lip~~~~~ae~LPFpd~SFDlV~ss~vL~h~ 400 (480)
.+|||+|||+|.+ ...++..+..+++++++. .+... ....+ .+.+..+++..+|+++++||+|++..+++|+
T Consensus 25 ~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 102 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIFVEDGYKTYGIEISD--LQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFHM 102 (209)
T ss_dssp SEEEEESCCSSSCTHHHHHHTTCEEEEEECCH--HHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGGS
T ss_pred CEEEEECCCCCHHHHHHHHhCCCEEEEEECCH--HHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHHhC
Confidence 4899999999998 456666788888888753 22222 22222 3556667788899999999999999999888
Q ss_pred cChhcHHHHHHHHHhcccCCcEEEEeeccCCh---------------------------hhHHHHHHHHHHcCceeeEEE
Q 046488 401 IDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK---------------------------EDMNDYLEVFKMLKYKKHKWV 453 (480)
Q Consensus 401 ~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~---------------------------edL~~~~~~l~~lGfkkl~W~ 453 (480)
.. .....++.++.|+|||||++++..+.... -..+++..+++.+||....-.
T Consensus 103 ~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~~~~ 181 (209)
T 2p8j_A 103 RK-NDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFKEDR 181 (209)
T ss_dssp CH-HHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEEEEE
T ss_pred CH-HHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceeeeee
Confidence 42 23467999999999999999987432110 012456778888887655322
Q ss_pred EeeccCC--CCcceeEEEEEEeCCC
Q 046488 454 VVPKRDK--DDREVFFSAVLEKPPR 476 (480)
Q Consensus 454 ~~~k~d~--~~~E~~lsav~qKP~~ 476 (480)
.....+. .....|...+.+|-.+
T Consensus 182 ~~~~~~~g~~~~~~f~~~~~~~~~~ 206 (209)
T 2p8j_A 182 VVERINDGLKIKQGYVDYIAEKFSK 206 (209)
T ss_dssp EEEEEETTEEEEEEEEEEEEECCCC
T ss_pred eeehhhcCCcccceeeeeehhhhhh
Confidence 2222122 2246677778887544
No 45
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.49 E-value=1.3e-13 Score=134.51 Aligned_cols=97 Identities=10% Similarity=0.053 Sum_probs=74.4
Q ss_pred eEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHH---h------CCCCeeeecccCCCCCCCccchheeccccc
Q 046488 328 IGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIAL---R------GLVPLYITINQRVPFFDNTLDLIHTTRFLD 398 (480)
Q Consensus 328 ~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~---r------glip~~~~~ae~LPFpd~SFDlV~ss~vL~ 398 (480)
+|||||||+|.++..|++++..+++++++. .+...... + ..+.+..++...+|+ +++||+|+++..+.
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~~ 161 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGWEVTALELST--SVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGSI 161 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTCCEEEEESCH--HHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHHHH
T ss_pred cEEEEeccCCHHHHHHHHcCCeEEEEECCH--HHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCccc
Confidence 799999999999999999998899988762 23222211 1 234566777888888 89999999775555
Q ss_pred CccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 399 GWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 399 h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
|+.++..+..+|.++.|+|||||+|++..
T Consensus 162 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 162 NELDEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp TTSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 55555445789999999999999999863
No 46
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.49 E-value=9e-14 Score=131.25 Aligned_cols=150 Identities=15% Similarity=0.121 Sum_probs=98.4
Q ss_pred CCeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChhHHHHHHH---hCC-------------------------------
Q 046488 326 IRIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNEMIAL---RGL------------------------------- 370 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~~~~~iA~---rgl------------------------------- 370 (480)
..+|||+|||+|.++..+++.+. .+++++++. .+...+.. ...
T Consensus 57 ~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~--~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 57 GELLIDIGSGPTIYQLLSACESFTEIIVSDYTD--QNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp EEEEEEESCTTCCGGGTTGGGTEEEEEEEESCH--HHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHhhcccCeEEEecCCH--HHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 35899999999999999998877 788887652 33222211 111
Q ss_pred -C-CeeeecccCC-CCCC---CccchheecccccCccCh-hcHHHHHHHHHhcccCCcEEEEeeccC-------------
Q 046488 371 -V-PLYITINQRV-PFFD---NTLDLIHTTRFLDGWIDF-VLLDFILYDWDRVLRPGGLLWIDSFFC------------- 430 (480)
Q Consensus 371 -i-p~~~~~ae~L-PFpd---~SFDlV~ss~vL~h~~d~-~~l~~~L~EI~RVLKPGG~fiI~~f~~------------- 430 (480)
+ .+...+...+ ++++ ++||+|++..+++++... .....++.++.|+|||||+|++..+..
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~ 214 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSS 214 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEEC
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccccc
Confidence 3 3444444444 4466 899999999999844321 123679999999999999999875321
Q ss_pred ChhhHHHHHHHHHHcCceeeEEEEeecc-CC--CCcceeEEEEEEeCCCC
Q 046488 431 AKEDMNDYLEVFKMLKYKKHKWVVVPKR-DK--DDREVFFSAVLEKPPRP 477 (480)
Q Consensus 431 ~~edL~~~~~~l~~lGfkkl~W~~~~k~-d~--~~~E~~lsav~qKP~~~ 477 (480)
..-..+.+.++++..||+.+.+...... +. ...+.++..+.+|+..+
T Consensus 215 ~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~ 264 (265)
T 2i62_A 215 LPLGWETVRDAVEEAGYTIEQFEVISQNYSSTTSNNEGLFSLVGRKPGRS 264 (265)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEEEEECCCCCTTTBCCCCEEEEEEECCC--
T ss_pred cccCHHHHHHHHHHCCCEEEEEEEecccCCccccccceEEEEEecccccC
Confidence 1112356888999999998887765421 11 11233555678888653
No 47
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.49 E-value=2.7e-13 Score=132.34 Aligned_cols=129 Identities=13% Similarity=0.132 Sum_probs=92.3
Q ss_pred cCCCCCCCCeEEEECCCCcHHHHHHhhC-CCEEEEEecCCChhHHH----HHHHhCC---CCeeeecccCCCCCCCccch
Q 046488 319 LDIKPGEIRIGLDFSIGTGTFAARMREF-NVTLVSAIINLGAPFNE----MIALRGL---VPLYITINQRVPFFDNTLDL 390 (480)
Q Consensus 319 L~l~~g~iR~VLDVGCGtG~fAa~Lae~-gV~Vv~vd~d~~~~~~~----~iA~rgl---ip~~~~~ae~LPFpd~SFDl 390 (480)
+.+.++ .+|||||||+|.++..++++ |..+++++++. .+.. .+...+. +.+..++...+ +++||+
T Consensus 68 ~~~~~~--~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~ 140 (302)
T 3hem_A 68 LNLEPG--MTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSE--NQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDR 140 (302)
T ss_dssp TCCCTT--CEEEEETCTTSHHHHHHHHHHCCEEEEEECCH--HHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSE
T ss_pred cCCCCc--CEEEEeeccCcHHHHHHHHhCCCEEEEEECCH--HHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccE
Confidence 345555 48999999999999999987 88898888762 2222 2222232 33445555554 899999
Q ss_pred heecccccCccCh------hcHHHHHHHHHhcccCCcEEEEeeccCChh-------------------------------
Q 046488 391 IHTTRFLDGWIDF------VLLDFILYDWDRVLRPGGLLWIDSFFCAKE------------------------------- 433 (480)
Q Consensus 391 V~ss~vL~h~~d~------~~l~~~L~EI~RVLKPGG~fiI~~f~~~~e------------------------------- 433 (480)
|++..+++|+.++ ..+..++.++.|+|||||++++..+.....
T Consensus 141 v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 220 (302)
T 3hem_A 141 IVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRL 220 (302)
T ss_dssp EEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCC
T ss_pred EEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCC
Confidence 9999999999664 334679999999999999999975433211
Q ss_pred -hHHHHHHHHHHcCceeeEEEE
Q 046488 434 -DMNDYLEVFKMLKYKKHKWVV 454 (480)
Q Consensus 434 -dL~~~~~~l~~lGfkkl~W~~ 454 (480)
..+.+...++..||+.+.+..
T Consensus 221 ~s~~~~~~~l~~aGf~~~~~~~ 242 (302)
T 3hem_A 221 PRISQVDYYSSNAGWKVERYHR 242 (302)
T ss_dssp CCHHHHHHHHHHHTCEEEEEEE
T ss_pred CCHHHHHHHHHhCCcEEEEEEe
Confidence 134567788889998776544
No 48
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.49 E-value=1.9e-13 Score=128.10 Aligned_cols=126 Identities=15% Similarity=0.021 Sum_probs=92.1
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHh--C-----CCCeeeecccCCCCCCCccchheecccccC
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALR--G-----LVPLYITINQRVPFFDNTLDLIHTTRFLDG 399 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~r--g-----lip~~~~~ae~LPFpd~SFDlV~ss~vL~h 399 (480)
.+|||+|||+|.++..|++.+..+++++++. .+...+..+ . .+.+..++...++ ++++||+|++..++++
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPERFVVGLDISE--SALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFCA 144 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTEEEEEECSCH--HHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTTT
T ss_pred CCEEEeCCCCCHHHHHHHhCCCeEEEEECCH--HHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhhc
Confidence 3899999999999999999888888888652 332222111 1 1344556666666 5679999999999988
Q ss_pred ccChhcHHHHHHHHHhcccCCcEEEEeeccCCh--------hhHHHHHHHHHHcCceeeEEEEee
Q 046488 400 WIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK--------EDMNDYLEVFKMLKYKKHKWVVVP 456 (480)
Q Consensus 400 ~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~--------edL~~~~~~l~~lGfkkl~W~~~~ 456 (480)
+.+. ....++.++.|+|||||++++..+.... -..+.+.++++..||+.+......
T Consensus 145 ~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 208 (235)
T 3lcc_A 145 IEPE-MRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEENP 208 (235)
T ss_dssp SCGG-GHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEECT
T ss_pred CCHH-HHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEecC
Confidence 8633 2367999999999999999987543221 124678889999999988766543
No 49
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.48 E-value=1.1e-13 Score=135.67 Aligned_cols=140 Identities=12% Similarity=0.047 Sum_probs=100.9
Q ss_pred CeEEEECCCCcHHHHHHh--hC-CCEEEEEecCCChhHHHHHH----HhCC---CCeeeecccCCCCCCCccchheeccc
Q 046488 327 RIGLDFSIGTGTFAARMR--EF-NVTLVSAIINLGAPFNEMIA----LRGL---VPLYITINQRVPFFDNTLDLIHTTRF 396 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~La--e~-gV~Vv~vd~d~~~~~~~~iA----~rgl---ip~~~~~ae~LPFpd~SFDlV~ss~v 396 (480)
.+|||||||+|.++..++ .. +..+++++++. .+..... ..+. +.++.+++..+|++ ++||+|++..+
T Consensus 120 ~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~ 196 (305)
T 3ocj_A 120 CVVASVPCGWMSELLALDYSACPGVQLVGIDYDP--EALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNGL 196 (305)
T ss_dssp CEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCH--HHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCSS
T ss_pred CEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCH--HHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECCh
Confidence 489999999999999985 22 67888888752 2322221 1121 44566778889988 99999999999
Q ss_pred ccCccChhcHHHHHHHHHhcccCCcEEEEeeccCCh------------------------------------hhHHHHHH
Q 046488 397 LDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK------------------------------------EDMNDYLE 440 (480)
Q Consensus 397 L~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~------------------------------------edL~~~~~ 440 (480)
++|+.++.....++.++.|+|||||++++..+.... ...+.+.+
T Consensus 197 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (305)
T 3ocj_A 197 NIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTRA 276 (305)
T ss_dssp GGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHHH
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHHH
Confidence 999987764456899999999999999987532210 12456788
Q ss_pred HHHHcCceeeEEEEeeccCCCCcceeEEEEEEeCC
Q 046488 441 VFKMLKYKKHKWVVVPKRDKDDREVFFSAVLEKPP 475 (480)
Q Consensus 441 ~l~~lGfkkl~W~~~~k~d~~~~E~~lsav~qKP~ 475 (480)
+++..||+.+..... . ...+..++.+||.
T Consensus 277 ~l~~aGF~~v~~~~~----~--~~~~~~v~a~Kpa 305 (305)
T 3ocj_A 277 QLEEAGFTDLRFEDD----R--ARLFPTVIARKPA 305 (305)
T ss_dssp HHHHTTCEEEEEECC----T--TSSSCEEEEECCC
T ss_pred HHHHCCCEEEEEEcc----c--CceeeEEEEecCC
Confidence 999999998776542 1 2344577788983
No 50
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.48 E-value=2.5e-13 Score=130.98 Aligned_cols=127 Identities=14% Similarity=0.144 Sum_probs=89.5
Q ss_pred CCCCCCCCeEEEECCCCcHHHHHHhh-CCCEEEEEecCCChhHHHHH----HHhC---CCCeeeecccCCCCCCCccchh
Q 046488 320 DIKPGEIRIGLDFSIGTGTFAARMRE-FNVTLVSAIINLGAPFNEMI----ALRG---LVPLYITINQRVPFFDNTLDLI 391 (480)
Q Consensus 320 ~l~~g~iR~VLDVGCGtG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~i----A~rg---lip~~~~~ae~LPFpd~SFDlV 391 (480)
++.++ .+|||||||+|.++..+++ .|..+++++++. .+...+ ...+ .+.+..++.+.+| ++||+|
T Consensus 61 ~~~~~--~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~--~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v 133 (287)
T 1kpg_A 61 GLQPG--MTLLDVGCGWGATMMRAVEKYDVNVVGLTLSK--NQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRI 133 (287)
T ss_dssp TCCTT--CEEEEETCTTSHHHHHHHHHHCCEEEEEESCH--HHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEE
T ss_pred CCCCc--CEEEEECCcccHHHHHHHHHcCCEEEEEECCH--HHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEE
Confidence 34444 4899999999999999984 588888888752 222211 1112 2334455566665 899999
Q ss_pred eecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCCh--------------------------------hhHHHHH
Q 046488 392 HTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK--------------------------------EDMNDYL 439 (480)
Q Consensus 392 ~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~--------------------------------edL~~~~ 439 (480)
++..+++|+.+.. ...++.++.|+|||||++++..+.... ...+.+.
T Consensus 134 ~~~~~l~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 212 (287)
T 1kpg_A 134 VSIGAFEHFGHER-YDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQ 212 (287)
T ss_dssp EEESCGGGTCTTT-HHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHH
T ss_pred EEeCchhhcChHH-HHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHH
Confidence 9999999985322 267999999999999999987533211 0234577
Q ss_pred HHHHHcCceeeEEEE
Q 046488 440 EVFKMLKYKKHKWVV 454 (480)
Q Consensus 440 ~~l~~lGfkkl~W~~ 454 (480)
+++++.||+.+.+..
T Consensus 213 ~~l~~aGf~~~~~~~ 227 (287)
T 1kpg_A 213 ECASANGFTVTRVQS 227 (287)
T ss_dssp HHHHTTTCEEEEEEE
T ss_pred HHHHhCCcEEEEEEe
Confidence 888999999887754
No 51
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.48 E-value=4.8e-13 Score=124.53 Aligned_cols=119 Identities=18% Similarity=0.226 Sum_probs=90.7
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCCCCccchheecccccCccChhcH
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFDNTLDLIHTTRFLDGWIDFVLL 406 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d~~~l 406 (480)
.+|||+|||+|.++..+++. ++++++ ..+ ...+.+..+.+..++.+.+|+++++||+|++..+++|+.+.
T Consensus 49 ~~vLDiG~G~G~~~~~l~~~----~~vD~s--~~~-~~~a~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~--- 118 (219)
T 1vlm_A 49 GRGVEIGVGTGRFAVPLKIK----IGVEPS--ERM-AEIARKRGVFVLKGTAENLPLKDESFDFALMVTTICFVDDP--- 118 (219)
T ss_dssp SCEEEETCTTSTTHHHHTCC----EEEESC--HHH-HHHHHHTTCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCH---
T ss_pred CcEEEeCCCCCHHHHHHHHH----hccCCC--HHH-HHHHHhcCCEEEEcccccCCCCCCCeeEEEEcchHhhccCH---
Confidence 47999999999999999876 555544 233 33444445666677788899999999999999999988765
Q ss_pred HHHHHHHHhcccCCcEEEEeeccCCh---------------------hhHHHHHHHHHHcCceeeEEEEe
Q 046488 407 DFILYDWDRVLRPGGLLWIDSFFCAK---------------------EDMNDYLEVFKMLKYKKHKWVVV 455 (480)
Q Consensus 407 ~~~L~EI~RVLKPGG~fiI~~f~~~~---------------------edL~~~~~~l~~lGfkkl~W~~~ 455 (480)
..++.++.|+|||||++++..+.... -..+.+.+++++.||+.+.....
T Consensus 119 ~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 119 ERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQT 188 (219)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEecc
Confidence 46999999999999999987432211 12356888999999998765543
No 52
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.47 E-value=3.3e-13 Score=125.51 Aligned_cols=98 Identities=13% Similarity=0.070 Sum_probs=75.4
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHh-CCCCeeeecccCCCCCCCccchheecc-cccCccChh
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALR-GLVPLYITINQRVPFFDNTLDLIHTTR-FLDGWIDFV 404 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~r-glip~~~~~ae~LPFpd~SFDlV~ss~-vL~h~~d~~ 404 (480)
.+|||+|||+|.++..+++++..+++++++ ..+......+ ..+.+..++...+++ +++||+|+|.. +++|+.++.
T Consensus 42 ~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s--~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~~~ 118 (239)
T 3bxo_A 42 SSLLDVACGTGTHLEHFTKEFGDTAGLELS--EDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKTTE 118 (239)
T ss_dssp CEEEEETCTTSHHHHHHHHHHSEEEEEESC--HHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCSHH
T ss_pred CeEEEecccCCHHHHHHHHhCCcEEEEeCC--HHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCCHH
Confidence 489999999999999999887788888765 2333332222 235556677777887 88999999654 888876655
Q ss_pred cHHHHHHHHHhcccCCcEEEEee
Q 046488 405 LLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 405 ~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
.+..++.++.|+|||||++++..
T Consensus 119 ~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 119 ELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp HHHHHHHHHHHTEEEEEEEEECC
T ss_pred HHHHHHHHHHHhcCCCeEEEEEe
Confidence 55789999999999999999974
No 53
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.47 E-value=2.5e-13 Score=131.94 Aligned_cols=105 Identities=12% Similarity=0.053 Sum_probs=78.7
Q ss_pred hHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC---CCEEEEEecCCChhHHHHHHHh-----C-CCCeeeecccCCCCC
Q 046488 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMREF---NVTLVSAIINLGAPFNEMIALR-----G-LVPLYITINQRVPFF 384 (480)
Q Consensus 314 ~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~~~~~~iA~r-----g-lip~~~~~ae~LPFp 384 (480)
.+..++.+.++ .+|||||||+|.++..+++. +..+++++++. .+...+.+ + .+.+..++++.+|+
T Consensus 13 ~~~~~~~~~~~--~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~---~~~~~a~~~~~~~~~~v~~~~~d~~~~~~- 86 (284)
T 3gu3_A 13 LVNTVWKITKP--VHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGE---TLLAEARELFRLLPYDSEFLEGDATEIEL- 86 (284)
T ss_dssp HHHTTSCCCSC--CEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCH---HHHHHHHHHHHSSSSEEEEEESCTTTCCC-
T ss_pred HHHHHhccCCC--CeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCH---HHHHHHHHHHHhcCCceEEEEcchhhcCc-
Confidence 34444455444 48999999999999999987 57888888762 22222222 1 23445667788888
Q ss_pred CCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 385 DNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 385 d~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
+++||+|++..+++|+.+. ..++.++.|+|||||++++..
T Consensus 87 ~~~fD~v~~~~~l~~~~~~---~~~l~~~~~~LkpgG~l~~~~ 126 (284)
T 3gu3_A 87 NDKYDIAICHAFLLHMTTP---ETMLQKMIHSVKKGGKIICFE 126 (284)
T ss_dssp SSCEEEEEEESCGGGCSSH---HHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCeeEEEECChhhcCCCH---HHHHHHHHHHcCCCCEEEEEe
Confidence 5799999999999998776 469999999999999999764
No 54
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.47 E-value=5.3e-13 Score=124.36 Aligned_cols=96 Identities=17% Similarity=0.143 Sum_probs=73.2
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHH----HHhC-CCCeeeecccCCCCCCCccchheecc-cccCc
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMI----ALRG-LVPLYITINQRVPFFDNTLDLIHTTR-FLDGW 400 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~i----A~rg-lip~~~~~ae~LPFpd~SFDlV~ss~-vL~h~ 400 (480)
.+|||+|||+|.++..+++. ..+++++++. .+...+ ...+ .+.+..++...+|++ ++||+|++.. +++|+
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~ 110 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH-YEVTGVDLSE--EMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDAITILCDSLNYL 110 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT-SEEEEEESCH--HHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGGGC
T ss_pred CeEEEecCCCCHHHHHHhhC-CeEEEEECCH--HHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCchhhc
Confidence 48999999999999999988 7888888652 222221 1122 244556667778876 8999999986 88888
Q ss_pred cChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 401 IDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 401 ~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
.+......++.++.|+|||||++++.
T Consensus 111 ~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 111 QTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp CSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 65555578999999999999999873
No 55
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.47 E-value=2.3e-13 Score=132.18 Aligned_cols=124 Identities=12% Similarity=-0.091 Sum_probs=89.0
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhC-----------------------CCCeeeecccCCCC
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRG-----------------------LVPLYITINQRVPF 383 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rg-----------------------lip~~~~~ae~LPF 383 (480)
.+|||+|||+|..+..|+++|..|+++|++ ..+...+.++. .+.+..+++..+++
T Consensus 70 ~~vLD~GCG~G~~~~~La~~G~~V~gvD~S--~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~ 147 (252)
T 2gb4_A 70 LRVFFPLCGKAIEMKWFADRGHTVVGVEIS--EIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPR 147 (252)
T ss_dssp CEEEETTCTTCTHHHHHHHTTCEEEEECSC--HHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGG
T ss_pred CeEEEeCCCCcHHHHHHHHCCCeEEEEECC--HHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCc
Confidence 489999999999999999999999998865 24433332221 23445677888888
Q ss_pred CC-CccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCCh---------hhHHHHHHHHHHcCceeeEEE
Q 046488 384 FD-NTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK---------EDMNDYLEVFKMLKYKKHKWV 453 (480)
Q Consensus 384 pd-~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~---------edL~~~~~~l~~lGfkkl~W~ 453 (480)
.+ ++||+|++..+++++++.. ...++.++.|+|||||+|++..+.... -..+++..+++. +|+...+.
T Consensus 148 ~~~~~FD~V~~~~~l~~l~~~~-~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~~~~ 225 (252)
T 2gb4_A 148 ANIGKFDRIWDRGALVAINPGD-HDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQCLE 225 (252)
T ss_dssp GCCCCEEEEEESSSTTTSCGGG-HHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEEEEE
T ss_pred ccCCCEEEEEEhhhhhhCCHHH-HHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEEEEe
Confidence 75 8999999988888876433 367999999999999999754321110 123456677766 58776665
Q ss_pred E
Q 046488 454 V 454 (480)
Q Consensus 454 ~ 454 (480)
.
T Consensus 226 ~ 226 (252)
T 2gb4_A 226 E 226 (252)
T ss_dssp E
T ss_pred c
Confidence 4
No 56
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.46 E-value=2.1e-13 Score=130.48 Aligned_cols=122 Identities=17% Similarity=0.151 Sum_probs=90.1
Q ss_pred CeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHH----HHHHhCC--CCeeeecccCCCCCCCccchheeccccc
Q 046488 327 RIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNE----MIALRGL--VPLYITINQRVPFFDNTLDLIHTTRFLD 398 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~----~iA~rgl--ip~~~~~ae~LPFpd~SFDlV~ss~vL~ 398 (480)
.+|||||||+|.++..+++. +..+++++++. .+.. .+...+. +.+..++...+|+++++||+|++..+++
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 116 (276)
T 3mgg_A 39 AKVLEAGCGIGAQTVILAKNNPDAEITSIDISP--ESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVLE 116 (276)
T ss_dssp CEEEETTCTTSHHHHHHHHHCTTSEEEEEESCH--HHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCGG
T ss_pred CeEEEecCCCCHHHHHHHHhCCCCEEEEEECCH--HHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechhh
Confidence 48999999999999999987 67888888762 2222 2222232 3445566888999999999999999999
Q ss_pred CccChhcHHHHHHHHHhcccCCcEEEEeecc-------CChhh---------------------HHHHHHHHHHcCceee
Q 046488 399 GWIDFVLLDFILYDWDRVLRPGGLLWIDSFF-------CAKED---------------------MNDYLEVFKMLKYKKH 450 (480)
Q Consensus 399 h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~-------~~~ed---------------------L~~~~~~l~~lGfkkl 450 (480)
|+.+. ..++.++.|+|||||++++.... ..... ...+..++++.||+.+
T Consensus 117 ~~~~~---~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~v 193 (276)
T 3mgg_A 117 HLQSP---EEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFEKI 193 (276)
T ss_dssp GCSCH---HHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCEEE
T ss_pred hcCCH---HHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCCeE
Confidence 99876 46999999999999999986321 11100 1235678999999877
Q ss_pred EEE
Q 046488 451 KWV 453 (480)
Q Consensus 451 ~W~ 453 (480)
...
T Consensus 194 ~~~ 196 (276)
T 3mgg_A 194 RVE 196 (276)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
No 57
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.46 E-value=4.3e-13 Score=124.17 Aligned_cols=96 Identities=11% Similarity=-0.036 Sum_probs=74.0
Q ss_pred CeEEEECCCCcHHHHHHhhCC--CEEEEEecCCChhHHHHHHHhC------------CCCeeeecccCCCCCCCccchhe
Q 046488 327 RIGLDFSIGTGTFAARMREFN--VTLVSAIINLGAPFNEMIALRG------------LVPLYITINQRVPFFDNTLDLIH 392 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~g--V~Vv~vd~d~~~~~~~~iA~rg------------lip~~~~~ae~LPFpd~SFDlV~ 392 (480)
.+|||+|||+|.++..+++++ ..+++++++. .+.. .+.+. .+.+..++...+++++++||+|+
T Consensus 31 ~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~--~~~~-~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 31 RRVIDLGCGQGNLLKILLKDSFFEQITGVDVSY--RSLE-IAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAAT 107 (217)
T ss_dssp CEEEEETCTTCHHHHHHHHCTTCSEEEEEESCH--HHHH-HHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEE
T ss_pred CEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCH--HHHH-HHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEe
Confidence 489999999999999999875 5888888752 3322 22221 24455566777788889999999
Q ss_pred ecccccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 393 TTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 393 ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
+..+++|+.++. +..++.++.|+|||||++++.
T Consensus 108 ~~~~l~~~~~~~-~~~~l~~~~~~LkpgG~li~~ 140 (217)
T 3jwh_A 108 VIEVIEHLDLSR-LGAFERVLFEFAQPKIVIVTT 140 (217)
T ss_dssp EESCGGGCCHHH-HHHHHHHHHTTTCCSEEEEEE
T ss_pred eHHHHHcCCHHH-HHHHHHHHHHHcCCCEEEEEc
Confidence 999999986543 367999999999999987775
No 58
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.45 E-value=2.5e-13 Score=138.83 Aligned_cols=124 Identities=10% Similarity=0.015 Sum_probs=95.2
Q ss_pred CCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhCCCCeee-----ecccCCCCCCCccchheecccccCc
Q 046488 326 IRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYI-----TINQRVPFFDNTLDLIHTTRFLDGW 400 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rglip~~~-----~~ae~LPFpd~SFDlV~ss~vL~h~ 400 (480)
..+|||||||+|.++..|++++..+++++++ +.....|.+..++... +..+.+|+++++||+|++..+++|+
T Consensus 108 ~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s---~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~ 184 (416)
T 4e2x_A 108 DPFIVEIGCNDGIMLRTIQEAGVRHLGFEPS---SGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYAANTLCHI 184 (416)
T ss_dssp SCEEEEETCTTTTTHHHHHHTTCEEEEECCC---HHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGGGC
T ss_pred CCEEEEecCCCCHHHHHHHHcCCcEEEECCC---HHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEEECChHHhc
Confidence 3489999999999999999999999998875 3334455555444332 3366788999999999999999999
Q ss_pred cChhcHHHHHHHHHhcccCCcEEEEeecc-----------CC-h-----hhHHHHHHHHHHcCceeeEEEEe
Q 046488 401 IDFVLLDFILYDWDRVLRPGGLLWIDSFF-----------CA-K-----EDMNDYLEVFKMLKYKKHKWVVV 455 (480)
Q Consensus 401 ~d~~~l~~~L~EI~RVLKPGG~fiI~~f~-----------~~-~-----edL~~~~~~l~~lGfkkl~W~~~ 455 (480)
.+. ..++.++.|+|||||++++.... .. . -..+.+..++++.||+.+.....
T Consensus 185 ~d~---~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~~~ 253 (416)
T 4e2x_A 185 PYV---QSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQRL 253 (416)
T ss_dssp TTH---HHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCH---HHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEEEc
Confidence 866 56999999999999999986311 00 0 12356888999999998765553
No 59
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.45 E-value=3.4e-13 Score=137.48 Aligned_cols=121 Identities=16% Similarity=0.208 Sum_probs=90.9
Q ss_pred CeEEEECCCCcHHHHHHhhC---CCEEEEEecCCChhHHHHHHHh----------C-----CCCeeeecccCC------C
Q 046488 327 RIGLDFSIGTGTFAARMREF---NVTLVSAIINLGAPFNEMIALR----------G-----LVPLYITINQRV------P 382 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~~~~~~iA~r----------g-----lip~~~~~ae~L------P 382 (480)
.+|||+|||+|.++..|++. +..+++++++. .+ ...+.+ | .+.+..++++.+ |
T Consensus 85 ~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~--~~-l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 85 ATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLD--NQ-LEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp CEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCH--HH-HHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CEEEEecCccCHHHHHHHHHhCCCCEEEEEECCH--HH-HHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 48999999999999998874 56888888752 23 222222 2 344556666666 9
Q ss_pred CCCCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCCh--------------------hhHHHHHHHH
Q 046488 383 FFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK--------------------EDMNDYLEVF 442 (480)
Q Consensus 383 Fpd~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~--------------------edL~~~~~~l 442 (480)
+++++||+|++..+++++.+. ..+|.++.|+|||||+|++..+.... -..+.+.+++
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~---~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 238 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNK---LALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLV 238 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCH---HHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHH
T ss_pred CCCCCEEEEEEccchhcCCCH---HHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHH
Confidence 999999999999999988775 57999999999999999997543221 1125688899
Q ss_pred HHcCceeeEEE
Q 046488 443 KMLKYKKHKWV 453 (480)
Q Consensus 443 ~~lGfkkl~W~ 453 (480)
++.||+.+.+.
T Consensus 239 ~~aGF~~v~~~ 249 (383)
T 4fsd_A 239 AEAGFRDVRLV 249 (383)
T ss_dssp HHTTCCCEEEE
T ss_pred HHCCCceEEEE
Confidence 99999876543
No 60
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.45 E-value=7.2e-13 Score=120.89 Aligned_cols=121 Identities=10% Similarity=-0.006 Sum_probs=85.3
Q ss_pred eEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHH----HHHhC-CCCeeeecccCCCCCCCccchheecccccCccC
Q 046488 328 IGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEM----IALRG-LVPLYITINQRVPFFDNTLDLIHTTRFLDGWID 402 (480)
Q Consensus 328 ~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~----iA~rg-lip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d 402 (480)
+|||+|||+|.++..+++.+..+++++++. .+... ....+ .+.+..+++..+|+++++||+|++.. .|+.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~~~~- 106 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGYEVTAVDQSS--VGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIF--CHLP- 106 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTCEEEEECSSH--HHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEEC--CCCC-
T ss_pred CEEEECCCCCHhHHHHHhCCCeEEEEECCH--HHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEh--hcCC-
Confidence 799999999999999999988998888652 22222 22222 23445566778899999999999853 4553
Q ss_pred hhcHHHHHHHHHhcccCCcEEEEeeccCChh--------------hHHHHHHHHHHcCceeeEEEEe
Q 046488 403 FVLLDFILYDWDRVLRPGGLLWIDSFFCAKE--------------DMNDYLEVFKMLKYKKHKWVVV 455 (480)
Q Consensus 403 ~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~e--------------dL~~~~~~l~~lGfkkl~W~~~ 455 (480)
......++.++.|+|||||++++..+..... ..+.+..+++ ||+.+.....
T Consensus 107 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~~~ 171 (202)
T 2kw5_A 107 SSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIANNL 171 (202)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEEEEE
Confidence 2234679999999999999999975322111 1345667776 9987765443
No 61
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.44 E-value=5.7e-13 Score=125.60 Aligned_cols=95 Identities=16% Similarity=0.050 Sum_probs=75.9
Q ss_pred CeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHHHHHHh-CCCCeeeecccCCCCCCCccchheecccccCccCh
Q 046488 327 RIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNEMIALR-GLVPLYITINQRVPFFDNTLDLIHTTRFLDGWIDF 403 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA~r-glip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d~ 403 (480)
.+|||+|||+|.++..++++ +..+++++++. .+......+ ..+.+..++.+.+| ++++||+|++..+++|+.+.
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~--~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~ 111 (259)
T 2p35_A 35 LNGYDLGCGPGNSTELLTDRYGVNVITGIDSDD--DMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANAVFQWVPDH 111 (259)
T ss_dssp SSEEEETCTTTHHHHHHHHHHCTTSEEEEESCH--HHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEESCGGGSTTH
T ss_pred CEEEEecCcCCHHHHHHHHhCCCCEEEEEECCH--HHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeCchhhCCCH
Confidence 47999999999999999987 77888888652 333333222 23556667788888 89999999999999888665
Q ss_pred hcHHHHHHHHHhcccCCcEEEEee
Q 046488 404 VLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 404 ~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
..++.++.|+|||||++++..
T Consensus 112 ---~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 112 ---LAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp ---HHHHHHHGGGEEEEEEEEEEE
T ss_pred ---HHHHHHHHHhcCCCeEEEEEe
Confidence 569999999999999999874
No 62
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.41 E-value=5.6e-13 Score=122.40 Aligned_cols=96 Identities=22% Similarity=0.237 Sum_probs=75.4
Q ss_pred CCeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChhHHHHHHHh-CCCCeeeecccCCCCCCCccchheecccccCccCh
Q 046488 326 IRIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNEMIALR-GLVPLYITINQRVPFFDNTLDLIHTTRFLDGWIDF 403 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~~~~~iA~r-glip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d~ 403 (480)
..+|||+|||+|.++..+ +. .+++++++ ..+......+ ..+.+..++.+.+|+++++||+|++..+++|+.+.
T Consensus 37 ~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~ 111 (211)
T 2gs9_A 37 GESLLEVGAGTGYWLRRL---PYPQKVGVEPS--EAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVEDV 111 (211)
T ss_dssp CSEEEEETCTTCHHHHHC---CCSEEEEECCC--HHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSCH
T ss_pred CCeEEEECCCCCHhHHhC---CCCeEEEEeCC--HHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcCCH
Confidence 358999999999999988 56 78887765 2333333222 24556667788899999999999999999998765
Q ss_pred hcHHHHHHHHHhcccCCcEEEEeecc
Q 046488 404 VLLDFILYDWDRVLRPGGLLWIDSFF 429 (480)
Q Consensus 404 ~~l~~~L~EI~RVLKPGG~fiI~~f~ 429 (480)
..++.++.|+|||||++++..+.
T Consensus 112 ---~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 112 ---ERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp ---HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ---HHHHHHHHHHcCCCCEEEEEecC
Confidence 46999999999999999997543
No 63
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.41 E-value=1.3e-12 Score=128.17 Aligned_cols=122 Identities=12% Similarity=0.041 Sum_probs=87.7
Q ss_pred CeEEEECCCCcHHHHHHhhC-CCEEEEEecCCChhHHHHH----HHhCC---CCeeeecccCCCCCCCccchheeccccc
Q 046488 327 RIGLDFSIGTGTFAARMREF-NVTLVSAIINLGAPFNEMI----ALRGL---VPLYITINQRVPFFDNTLDLIHTTRFLD 398 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~-gV~Vv~vd~d~~~~~~~~i----A~rgl---ip~~~~~ae~LPFpd~SFDlV~ss~vL~ 398 (480)
.+|||||||+|.++..+++. |..+++++++. .+.... +..+. +.+..++.+.+| ++||+|++..+++
T Consensus 92 ~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~l~ 166 (318)
T 2fk8_A 92 MTLLDIGCGWGTTMRRAVERFDVNVIGLTLSK--NQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEAFE 166 (318)
T ss_dssp CEEEEESCTTSHHHHHHHHHHCCEEEEEESCH--HHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESCGG
T ss_pred CEEEEEcccchHHHHHHHHHCCCEEEEEECCH--HHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeChHH
Confidence 48999999999999999987 88999988762 222221 11122 334455566664 8999999999999
Q ss_pred CccChhcHHHHHHHHHhcccCCcEEEEeeccCChh--------------------------------hHHHHHHHHHHcC
Q 046488 399 GWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKE--------------------------------DMNDYLEVFKMLK 446 (480)
Q Consensus 399 h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~e--------------------------------dL~~~~~~l~~lG 446 (480)
|+.+.. ...++.++.|+|||||++++..+..... ..+.+.++++..|
T Consensus 167 ~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aG 245 (318)
T 2fk8_A 167 HFGHEN-YDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEKAG 245 (318)
T ss_dssp GTCGGG-HHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHHTT
T ss_pred hcCHHH-HHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHHHhCC
Confidence 885322 3679999999999999999875433210 1345677888899
Q ss_pred ceeeEEEE
Q 046488 447 YKKHKWVV 454 (480)
Q Consensus 447 fkkl~W~~ 454 (480)
|+.+.+..
T Consensus 246 f~~~~~~~ 253 (318)
T 2fk8_A 246 FTVPEPLS 253 (318)
T ss_dssp CBCCCCEE
T ss_pred CEEEEEEe
Confidence 98776544
No 64
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.41 E-value=4.2e-13 Score=126.51 Aligned_cols=126 Identities=17% Similarity=0.102 Sum_probs=82.5
Q ss_pred CeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChhHHHHHHHh----C-CCCeeeecccCC--CCCCCccchhee-cccc
Q 046488 327 RIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNEMIALR----G-LVPLYITINQRV--PFFDNTLDLIHT-TRFL 397 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~~~~~iA~r----g-lip~~~~~ae~L--PFpd~SFDlV~s-s~vL 397 (480)
.+|||||||+|.++..+++.+. .+++++++ ..+...+.++ + .+.+..++.+.+ |+++++||+|++ .+.+
T Consensus 62 ~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s--~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~ 139 (236)
T 1zx0_A 62 GRVLEVGFGMAIAASKVQEAPIDEHWIIECN--DGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp EEEEEECCTTSHHHHHHHTSCEEEEEEEECC--HHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CeEEEEeccCCHHHHHHHhcCCCeEEEEcCC--HHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCccc
Confidence 4899999999999999988655 67777765 2333322221 1 133445666677 899999999998 5554
Q ss_pred cCcc--ChhcHHHHHHHHHhcccCCcEEEEeeccCCh-------hhH-----HHHHHHHHHcCce--eeEEEEe
Q 046488 398 DGWI--DFVLLDFILYDWDRVLRPGGLLWIDSFFCAK-------EDM-----NDYLEVFKMLKYK--KHKWVVV 455 (480)
Q Consensus 398 ~h~~--d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~-------edL-----~~~~~~l~~lGfk--kl~W~~~ 455 (480)
+.. .......++.|+.|+|||||+|++.++.... ... +.....+...||. .+.+.+.
T Consensus 140 -~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~i~~~~~ 212 (236)
T 1zx0_A 140 -SEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRRENIRTEVM 212 (236)
T ss_dssp -BGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHTTCCGGGEEEEEE
T ss_pred -chhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHHCCCCCCceeEEEE
Confidence 222 1222346899999999999999986432110 001 2344677888998 3555543
No 65
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.40 E-value=3.3e-13 Score=132.37 Aligned_cols=149 Identities=16% Similarity=0.112 Sum_probs=90.1
Q ss_pred CCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHHHHHHhC----------------------------------
Q 046488 326 IRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNEMIALRG---------------------------------- 369 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA~rg---------------------------------- 369 (480)
..+|||||||+|.++..|+++ +..++++|++ +.+...|.++
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis---~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKWGPSRMVGLDID---SRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKR 123 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHTCCSEEEEEESC---HHHHHHHHHTC---------------------------------
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCC---HHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccc
Confidence 358999999999999999987 6788998876 2333333332
Q ss_pred -------------------------------CCCeeeecccC-----CCCCCCccchheecccccCcc---ChhcHHHHH
Q 046488 370 -------------------------------LVPLYITINQR-----VPFFDNTLDLIHTTRFLDGWI---DFVLLDFIL 410 (480)
Q Consensus 370 -------------------------------lip~~~~~ae~-----LPFpd~SFDlV~ss~vL~h~~---d~~~l~~~L 410 (480)
.+.+..++... +++.+++||+|+|..+++++. .+..+..++
T Consensus 124 ~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l 203 (292)
T 3g07_A 124 SCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMF 203 (292)
T ss_dssp ------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHH
Confidence 12222333222 246789999999999886553 333457899
Q ss_pred HHHHhcccCCcEEEEee--cc---CC---hhhH-----------HHHHHHHHH--cCceeeEEEEeecc-CCCCcceeEE
Q 046488 411 YDWDRVLRPGGLLWIDS--FF---CA---KEDM-----------NDYLEVFKM--LKYKKHKWVVVPKR-DKDDREVFFS 468 (480)
Q Consensus 411 ~EI~RVLKPGG~fiI~~--f~---~~---~edL-----------~~~~~~l~~--lGfkkl~W~~~~k~-d~~~~E~~ls 468 (480)
.+++|+|||||+|++.. |. .. .+.+ +.+.+++.. +||+.+........ ..+-.- ..
T Consensus 204 ~~~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~~~~~~~~g~~r--~i 281 (292)
T 3g07_A 204 RRIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVATPHNTSKGFQR--PV 281 (292)
T ss_dssp HHHHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC-----------C--CC
T ss_pred HHHHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEeccCCCCCCCccc--eE
Confidence 99999999999999862 11 11 1111 235678888 99987654322111 110001 13
Q ss_pred EEEEeCCCCCC
Q 046488 469 AVLEKPPRPFR 479 (480)
Q Consensus 469 av~qKP~~~~~ 479 (480)
.+++|+..++|
T Consensus 282 ~~~~k~~~~~~ 292 (292)
T 3g07_A 282 YLFHKARSPSH 292 (292)
T ss_dssp EEEECCC----
T ss_pred EEEEcCCCCCC
Confidence 46888876654
No 66
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.40 E-value=1.3e-12 Score=126.18 Aligned_cols=97 Identities=13% Similarity=-0.007 Sum_probs=75.2
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHH----HHHHhC-CCCeeeecccCCCCCCCccchheecccccCcc
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNE----MIALRG-LVPLYITINQRVPFFDNTLDLIHTTRFLDGWI 401 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~----~iA~rg-lip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~ 401 (480)
.+|||+|||+|.++..|+++|..+++++++. .+.. .+...+ .+.+..++...+++ +++||+|++..+++|+.
T Consensus 122 ~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~~ 198 (286)
T 3m70_A 122 CKVLDLGCGQGRNSLYLSLLGYDVTSWDHNE--NSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMFLN 198 (286)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGGSC
T ss_pred CcEEEECCCCCHHHHHHHHCCCeEEEEECCH--HHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhhCC
Confidence 4899999999999999999999999988763 2222 222233 23445566777777 89999999999998875
Q ss_pred ChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 402 DFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 402 d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
++. +..++.++.|+|||||++++..
T Consensus 199 ~~~-~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 199 RER-VPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp GGG-HHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHH-HHHHHHHHHHhcCCCcEEEEEE
Confidence 443 4679999999999999987754
No 67
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.39 E-value=6.3e-13 Score=128.98 Aligned_cols=129 Identities=13% Similarity=0.041 Sum_probs=84.7
Q ss_pred CCeEEEECCCCcHHHHHHhh-CCCEEEEEecCCChhHHHHHHH---------------------hCC-------------
Q 046488 326 IRIGLDFSIGTGTFAARMRE-FNVTLVSAIINLGAPFNEMIAL---------------------RGL------------- 370 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~---------------------rgl------------- 370 (480)
..+|||||||+|.++..++. .+..++++|++ ..+...+.+ .+.
T Consensus 72 ~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s--~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 72 GRTLIDIGSGPTVYQLLSACSHFEDITMTDFL--EVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CSEEEEETCTTCCGGGTTGGGGCSEEEEECSC--HHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCeEEEECCCcChHHHHhhccCCCeEEEeCCC--HHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 35899999999996655544 36788888865 233332211 010
Q ss_pred --CCeeeecccC-CCC-----CCCccchheecccccCccCh-hcHHHHHHHHHhcccCCcEEEEeeccCC----------
Q 046488 371 --VPLYITINQR-VPF-----FDNTLDLIHTTRFLDGWIDF-VLLDFILYDWDRVLRPGGLLWIDSFFCA---------- 431 (480)
Q Consensus 371 --ip~~~~~ae~-LPF-----pd~SFDlV~ss~vL~h~~d~-~~l~~~L~EI~RVLKPGG~fiI~~f~~~---------- 431 (480)
+.+...+++. +|| ++++||+|++..+++++.+. .....+|.|+.|+|||||+|++......
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~ 229 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARL 229 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeee
Confidence 1112224444 664 45679999999999884332 1236799999999999999998632110
Q ss_pred ---hhhHHHHHHHHHHcCceeeEEEEee
Q 046488 432 ---KEDMNDYLEVFKMLKYKKHKWVVVP 456 (480)
Q Consensus 432 ---~edL~~~~~~l~~lGfkkl~W~~~~ 456 (480)
.-..+.+.++++..||+.+.+....
T Consensus 230 ~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 230 TVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp ECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred eeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 1134678889999999988776543
No 68
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.39 E-value=2e-12 Score=116.57 Aligned_cols=128 Identities=11% Similarity=0.015 Sum_probs=79.8
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHH----HHHHhCC--CCeeeecccCCC-CCCCccchheecccccC
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNE----MIALRGL--VPLYITINQRVP-FFDNTLDLIHTTRFLDG 399 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~----~iA~rgl--ip~~~~~ae~LP-Fpd~SFDlV~ss~vL~h 399 (480)
.+|||+|||+|.++..|++++..++++|++. .+.. .+...+. +.+..+..+.++ +.+++||+|+++....+
T Consensus 24 ~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~--~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~~ 101 (185)
T 3mti_A 24 SIVVDATMGNGNDTAFLAGLSKKVYAFDVQE--QALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYLP 101 (185)
T ss_dssp CEEEESCCTTSHHHHHHHTTSSEEEEEESCH--HHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC---
T ss_pred CEEEEEcCCCCHHHHHHHHhCCEEEEEECCH--HHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCCC
Confidence 4899999999999999999888899988763 2222 2222332 334444455543 56889999987632222
Q ss_pred c------cChhcHHHHHHHHHhcccCCcEEEEeeccCCh---hhHHHHHHHHHH---cCceeeEEEEee
Q 046488 400 W------IDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK---EDMNDYLEVFKM---LKYKKHKWVVVP 456 (480)
Q Consensus 400 ~------~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~---edL~~~~~~l~~---lGfkkl~W~~~~ 456 (480)
. ........++.++.|+|||||++++..|.... ++.+.+.+.++. .+|...++....
T Consensus 102 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 170 (185)
T 3mti_A 102 SADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLN 170 (185)
T ss_dssp --------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESS
T ss_pred CcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhc
Confidence 1 01122256899999999999999988664322 222334444444 457766666644
No 69
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.39 E-value=2e-12 Score=126.04 Aligned_cols=122 Identities=13% Similarity=0.008 Sum_probs=79.9
Q ss_pred CCeEEEECCCCcHHHHH----HhhC--CCEE--EEEecCCChhHHHHHHHh----CCCC---ee--eecccCCC------
Q 046488 326 IRIGLDFSIGTGTFAAR----MREF--NVTL--VSAIINLGAPFNEMIALR----GLVP---LY--ITINQRVP------ 382 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~----Lae~--gV~V--v~vd~d~~~~~~~~iA~r----glip---~~--~~~ae~LP------ 382 (480)
..+|||||||+|.++.. ++.+ ++.+ ++++++ ..+.....++ +.++ +. ...++.++
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S--~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPS--AEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSC--HHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCC--HHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 35899999999986643 3332 4543 666654 3444332221 1221 11 12234443
Q ss_pred CCCCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCC---------------------hhhHHHHHHH
Q 046488 383 FFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCA---------------------KEDMNDYLEV 441 (480)
Q Consensus 383 Fpd~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~---------------------~edL~~~~~~ 441 (480)
|++++||+|++..+++|+.+. ..+|.|++|+|||||++++...... .-..+.+..+
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~---~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDI---PATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQM 207 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCH---HHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHH
T ss_pred cCCCceeEEEEeeeeeecCCH---HHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHH
Confidence 779999999999999999877 4699999999999999998632110 0113457789
Q ss_pred HHHcCceeeEE
Q 046488 442 FKMLKYKKHKW 452 (480)
Q Consensus 442 l~~lGfkkl~W 452 (480)
++..||+....
T Consensus 208 l~~aGf~~~~~ 218 (292)
T 2aot_A 208 LDNLGLKYECY 218 (292)
T ss_dssp HHHHTCCEEEE
T ss_pred HHHCCCceEEE
Confidence 99999986653
No 70
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.38 E-value=7.3e-13 Score=129.11 Aligned_cols=95 Identities=17% Similarity=0.191 Sum_probs=74.5
Q ss_pred CCeEEEECCCCcHHHHHHh---hCCCEEEEEecCCChhHHHHH----HHh----CCCCeeeecccCCCCCC------Ccc
Q 046488 326 IRIGLDFSIGTGTFAARMR---EFNVTLVSAIINLGAPFNEMI----ALR----GLVPLYITINQRVPFFD------NTL 388 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~La---e~gV~Vv~vd~d~~~~~~~~i----A~r----glip~~~~~ae~LPFpd------~SF 388 (480)
..+|||||||+|.++..|+ ..+..+++++++. .+...+ ... ..+.+..++++.+|+++ ++|
T Consensus 37 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 37 RKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSA--TMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp CSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCH--HHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCH--HHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 4589999999999999999 4578899988762 222222 111 13445667788899888 899
Q ss_pred chheecccccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 389 DLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 389 DlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
|+|++..+++|+ +. ..++.++.|+|||||++++.
T Consensus 115 D~V~~~~~l~~~-~~---~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 115 DMITAVECAHWF-DF---EKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp EEEEEESCGGGS-CH---HHHHHHHHHHEEEEEEEEEE
T ss_pred eEEeHhhHHHHh-CH---HHHHHHHHHhcCCCcEEEEE
Confidence 999999999888 54 57999999999999999883
No 71
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.37 E-value=1.2e-12 Score=125.03 Aligned_cols=97 Identities=20% Similarity=0.230 Sum_probs=76.3
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCCCCccchheecccccCccChhcH
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFDNTLDLIHTTRFLDGWIDFVLL 406 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d~~~l 406 (480)
.+|||+|||+|.++..+++.+..+++++++. .+......+....+..++.+.+|+++++||+|++..++.|+.+. .
T Consensus 56 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~--~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~--~ 131 (260)
T 2avn_A 56 CRVLDLGGGTGKWSLFLQERGFEVVLVDPSK--EMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVEN--K 131 (260)
T ss_dssp CEEEEETCTTCHHHHHHHTTTCEEEEEESCH--HHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSC--H
T ss_pred CeEEEeCCCcCHHHHHHHHcCCeEEEEeCCH--HHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhcccc--H
Confidence 4899999999999999999988898888752 34333333322235566788899999999999998888777443 2
Q ss_pred HHHHHHHHhcccCCcEEEEee
Q 046488 407 DFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 407 ~~~L~EI~RVLKPGG~fiI~~ 427 (480)
..++.++.|+|||||++++..
T Consensus 132 ~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 132 DKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEEEe
Confidence 679999999999999999864
No 72
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.36 E-value=2.3e-12 Score=123.68 Aligned_cols=99 Identities=16% Similarity=0.070 Sum_probs=73.1
Q ss_pred CeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChhHHHHHH----HhCC---CCeeeecccCCCC-CCCccchheecccc
Q 046488 327 RIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNEMIA----LRGL---VPLYITINQRVPF-FDNTLDLIHTTRFL 397 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~~~~~iA----~rgl---ip~~~~~ae~LPF-pd~SFDlV~ss~vL 397 (480)
.+|||+|||+|.++..+++.+. .+++++++. .+...+. ..+. +.+..+++..+|+ ++++||+|++..++
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 143 (298)
T 1ri5_A 66 DSVLDLGCGKGGDLLKYERAGIGEYYGVDIAE--VSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSF 143 (298)
T ss_dssp CEEEEETCTTTTTHHHHHHHTCSEEEEEESCH--HHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCG
T ss_pred CeEEEECCCCCHHHHHHHHCCCCEEEEEECCH--HHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECchh
Confidence 4899999999999999988765 788888752 2222211 1121 3445566778888 68999999999998
Q ss_pred cCc-cChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 398 DGW-IDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 398 ~h~-~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
++. ........++.++.|+|||||++++..
T Consensus 144 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 144 HYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp GGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 763 233334679999999999999999863
No 73
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.34 E-value=4.6e-12 Score=128.05 Aligned_cols=122 Identities=15% Similarity=0.126 Sum_probs=86.2
Q ss_pred CCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHHHHHH----hC---CCCeeeecccCC--CCCCCccchheec
Q 046488 326 IRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNEMIAL----RG---LVPLYITINQRV--PFFDNTLDLIHTT 394 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA~----rg---lip~~~~~ae~L--PFpd~SFDlV~ss 394 (480)
..+|||||||+|.++..++++ +..++++|+ ..+...... .+ .+.+..++.... |++ ++||+|++.
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 180 PKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL---PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp CSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC---HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC---HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 458999999999999999884 667777774 233222211 12 234455554443 566 899999999
Q ss_pred ccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCCh---------------------------hhHHHHHHHHHHcCc
Q 046488 395 RFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK---------------------------EDMNDYLEVFKMLKY 447 (480)
Q Consensus 395 ~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~---------------------------edL~~~~~~l~~lGf 447 (480)
.++++|.++.. ..+|.++.|+|||||+++|.+..... ...++|.++++..||
T Consensus 256 ~vlh~~~~~~~-~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf 334 (363)
T 3dp7_A 256 QFLDCFSEEEV-ISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGL 334 (363)
T ss_dssp SCSTTSCHHHH-HHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTE
T ss_pred chhhhCCHHHH-HHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCC
Confidence 99999987642 56899999999999999886432211 023467889999999
Q ss_pred eeeEE
Q 046488 448 KKHKW 452 (480)
Q Consensus 448 kkl~W 452 (480)
+.+..
T Consensus 335 ~~v~~ 339 (363)
T 3dp7_A 335 EVEEI 339 (363)
T ss_dssp EESCC
T ss_pred eEEEE
Confidence 87643
No 74
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.34 E-value=7.8e-12 Score=109.11 Aligned_cols=138 Identities=16% Similarity=0.137 Sum_probs=92.0
Q ss_pred CeEEEECCCCcHHHHHHhhC---CCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCC--------CCCCccchheecc
Q 046488 327 RIGLDFSIGTGTFAARMREF---NVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVP--------FFDNTLDLIHTTR 395 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LP--------Fpd~SFDlV~ss~ 395 (480)
.+|||+|||+|.++..+++. +..+++++++. ... ...+.+..++...++ +++++||+|++..
T Consensus 24 ~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~ 96 (180)
T 1ej0_A 24 MTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP------IVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDM 96 (180)
T ss_dssp CEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC------CTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc------cCcEEEEEcccccchhhhhhhccCCCCceeEEEECC
Confidence 48999999999999999886 36888888764 111 023444555566666 7889999999987
Q ss_pred cccCccChh--c------HHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEEEEeeccCCCCcceeE
Q 046488 396 FLDGWIDFV--L------LDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKWVVVPKRDKDDREVFF 467 (480)
Q Consensus 396 vL~h~~d~~--~------l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W~~~~k~d~~~~E~~l 467 (480)
.+++..... . ...++.++.|+|||||.+++..+.... ...+.+.++.. |+.+.+...........|.|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 173 (180)
T 1ej0_A 97 APNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEG--FDEYLREIRSL-FTKVKVRKPDSSRARSREVYI 173 (180)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTT--HHHHHHHHHHH-EEEEEEECCTTSCTTCCEEEE
T ss_pred CccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCc--HHHHHHHHHHh-hhhEEeecCCcccccCceEEE
Confidence 776543320 0 136899999999999999987654332 33444455543 676665433222224568888
Q ss_pred EEEEEeC
Q 046488 468 SAVLEKP 474 (480)
Q Consensus 468 sav~qKP 474 (480)
.+.-.||
T Consensus 174 ~~~~~~~ 180 (180)
T 1ej0_A 174 VATGRKP 180 (180)
T ss_dssp EEEEECC
T ss_pred EEccCCC
Confidence 7766665
No 75
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.34 E-value=4.6e-12 Score=120.90 Aligned_cols=106 Identities=12% Similarity=0.114 Sum_probs=75.1
Q ss_pred hcCCCCCCCCeEEEECCCCcHHHHHHhhC-C--CEEEEEecCCC--------hhHHHHHHHhCC---CCeeeec---ccC
Q 046488 318 VLDIKPGEIRIGLDFSIGTGTFAARMREF-N--VTLVSAIINLG--------APFNEMIALRGL---VPLYITI---NQR 380 (480)
Q Consensus 318 vL~l~~g~iR~VLDVGCGtG~fAa~Lae~-g--V~Vv~vd~d~~--------~~~~~~iA~rgl---ip~~~~~---ae~ 380 (480)
.+.+.++ .+|||||||+|.++..++++ | ..+++++++.. ..+...+...+. +.+...+ ...
T Consensus 38 ~~~~~~~--~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 115 (275)
T 3bkx_A 38 AWQVKPG--EKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDL 115 (275)
T ss_dssp HHTCCTT--CEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCC
T ss_pred HcCCCCC--CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhcc
Confidence 3455555 48999999999999999987 4 78899988642 112222222222 3344444 567
Q ss_pred CCCCCCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeec
Q 046488 381 VPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 381 LPFpd~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
+|+++++||+|++..+++|+.++. .++..+.++++|||++++..+
T Consensus 116 ~~~~~~~fD~v~~~~~l~~~~~~~---~~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 116 GPIADQHFDRVVLAHSLWYFASAN---ALALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp GGGTTCCCSEEEEESCGGGSSCHH---HHHHHHHHHTTTCSEEEEEEE
T ss_pred CCCCCCCEEEEEEccchhhCCCHH---HHHHHHHHHhCCCCEEEEEEe
Confidence 889999999999999999988764 366666666667999999754
No 76
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.32 E-value=5.9e-12 Score=116.11 Aligned_cols=97 Identities=20% Similarity=0.294 Sum_probs=73.3
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHH----HHh-CCCCeeeecccCCCCCCCccchheecccccCcc
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMI----ALR-GLVPLYITINQRVPFFDNTLDLIHTTRFLDGWI 401 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~i----A~r-glip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~ 401 (480)
.+|||+|||+|.++..+++++..+++++++. .+...+ ... ..+.+..++...+++++++||+|++..+++++.
T Consensus 40 ~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~ 117 (227)
T 1ve3_A 40 GKVLDLACGVGGFSFLLEDYGFEVVGVDISE--DMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHFE 117 (227)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGCC
T ss_pred CeEEEEeccCCHHHHHHHHcCCEEEEEECCH--HHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhCC
Confidence 4899999999999999999888888888652 222221 111 235556677778899999999999998854443
Q ss_pred ChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 402 DFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 402 d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
... ...++.++.|+|||||++++.
T Consensus 118 ~~~-~~~~l~~~~~~L~~gG~l~~~ 141 (227)
T 1ve3_A 118 PLE-LNQVFKEVRRVLKPSGKFIMY 141 (227)
T ss_dssp HHH-HHHHHHHHHHHEEEEEEEEEE
T ss_pred HHH-HHHHHHHHHHHcCCCcEEEEE
Confidence 222 367999999999999999886
No 77
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.31 E-value=1.5e-11 Score=121.04 Aligned_cols=126 Identities=15% Similarity=0.180 Sum_probs=90.5
Q ss_pred CCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChh--HHHHHHHhCC---CCeeeecccCCCCCCCccchheeccccc
Q 046488 326 IRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAP--FNEMIALRGL---VPLYITINQRVPFFDNTLDLIHTTRFLD 398 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~--~~~~iA~rgl---ip~~~~~ae~LPFpd~SFDlV~ss~vL~ 398 (480)
..+|||+|||+|.++..++++ +..+++++++ ... +...+...+. +.+..++....|++++ ||+|++..+++
T Consensus 166 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~l~ 243 (335)
T 2r3s_A 166 PLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPNFLH 243 (335)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEESCGG
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcchhc
Confidence 358999999999999999886 6788888865 211 1122222232 4455566666677665 99999999999
Q ss_pred CccChhcHHHHHHHHHhcccCCcEEEEeeccCChh------------------------hHHHHHHHHHHcCceeeEEEE
Q 046488 399 GWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKE------------------------DMNDYLEVFKMLKYKKHKWVV 454 (480)
Q Consensus 399 h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~e------------------------dL~~~~~~l~~lGfkkl~W~~ 454 (480)
+|.++. ...++.++.|+|||||++++.++..... ..+++.+++++.||+.+.+..
T Consensus 244 ~~~~~~-~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~~~ 322 (335)
T 2r3s_A 244 HFDVAT-CEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQLHS 322 (335)
T ss_dssp GSCHHH-HHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEEEC
T ss_pred cCCHHH-HHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeEEE
Confidence 996553 2679999999999999988875433210 134678899999999887643
No 78
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.31 E-value=3.1e-12 Score=116.49 Aligned_cols=101 Identities=15% Similarity=0.108 Sum_probs=75.5
Q ss_pred CeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChhHHHHHHHh----CCCCeeeecccCCCCCCCccchheecccccCcc
Q 046488 327 RIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNEMIALR----GLVPLYITINQRVPFFDNTLDLIHTTRFLDGWI 401 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~~~~~iA~r----glip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~ 401 (480)
.+|||+|||+|.++..+++.+. .+++++++. .+......+ ..+.+..+++..+|+++++||+|++..+++++.
T Consensus 44 ~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~--~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~ 121 (215)
T 2pxx_A 44 DRILVLGCGNSALSYELFLGGFPNVTSVDYSS--VVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDALL 121 (215)
T ss_dssp CCEEEETCTTCSHHHHHHHTTCCCEEEEESCH--HHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHHHT
T ss_pred CeEEEECCCCcHHHHHHHHcCCCcEEEEeCCH--HHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhhhc
Confidence 4799999999999999999876 788887652 333222222 234556667778899999999999988776543
Q ss_pred ------------ChhcHHHHHHHHHhcccCCcEEEEeecc
Q 046488 402 ------------DFVLLDFILYDWDRVLRPGGLLWIDSFF 429 (480)
Q Consensus 402 ------------d~~~l~~~L~EI~RVLKPGG~fiI~~f~ 429 (480)
.......++.++.|+|||||++++..+.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 122 AGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp TTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 1123367999999999999999997654
No 79
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.31 E-value=2.6e-11 Score=114.87 Aligned_cols=117 Identities=9% Similarity=-0.004 Sum_probs=83.3
Q ss_pred CeEEEECCCCcHHHHHHhh--CCCEEEEEecCCChhHHH----HHHHhCC--CCeeeecccCCCCC---CCccchheecc
Q 046488 327 RIGLDFSIGTGTFAARMRE--FNVTLVSAIINLGAPFNE----MIALRGL--VPLYITINQRVPFF---DNTLDLIHTTR 395 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae--~gV~Vv~vd~d~~~~~~~----~iA~rgl--ip~~~~~ae~LPFp---d~SFDlV~ss~ 395 (480)
.+|||+|||+|.++..|+. .+..+++++++. .+.. .+...+. +.++.++++.++++ +++||+|++..
T Consensus 72 ~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 72 NTICDVGAGAGFPSLPIKICFPHLHVTIVDSLN--KRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARA 149 (240)
T ss_dssp CEEEEECSSSCTTHHHHHHHCTTCEEEEEESCH--HHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEEC
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCH--HHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEec
Confidence 4899999999999999984 467888888653 2222 2222333 44555667777765 78999999865
Q ss_pred cccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEE
Q 046488 396 FLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKW 452 (480)
Q Consensus 396 vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W 452 (480)
+ .+. ..++.++.|+|||||+|++..-....+++..+...++..||.....
T Consensus 150 ~----~~~---~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~ 199 (240)
T 1xdz_A 150 V----ARL---SVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENI 199 (240)
T ss_dssp C----SCH---HHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEE
T ss_pred c----CCH---HHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEE
Confidence 2 232 5699999999999999988643334556667778889999976543
No 80
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.31 E-value=2.3e-11 Score=108.04 Aligned_cols=125 Identities=18% Similarity=0.043 Sum_probs=82.9
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHHHHH---HhCCCC---eeeec-ccCCCCCCCc
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNEMIA---LRGLVP---LYITI-NQRVPFFDNT 387 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA---~rglip---~~~~~-ae~LPFpd~S 387 (480)
+.+.+.++ .+|||+|||+|.++..+++. +..+++++++. .+...+. .+..++ .+.++ .+.+|..+++
T Consensus 19 ~~~~~~~~--~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~--~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 94 (178)
T 3hm2_A 19 SALAPKPH--ETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISE--ERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDN 94 (178)
T ss_dssp HHHCCCTT--EEEEEESTTTTHHHHHHHTTSSSEEEEEECSCH--HHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSC
T ss_pred HHhcccCC--CeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCH--HHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCC
Confidence 34455544 48999999999999999987 67788887652 2222221 122222 33333 3455554589
Q ss_pred cchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEEEE
Q 046488 388 LDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKWVV 454 (480)
Q Consensus 388 FDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W~~ 454 (480)
||+|++..++++ . .++.++.|+|||||++++.... .+....+...++..|+.......
T Consensus 95 ~D~i~~~~~~~~---~----~~l~~~~~~L~~gG~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 152 (178)
T 3hm2_A 95 PDVIFIGGGLTA---P----GVFAAAWKRLPVGGRLVANAVT--VESEQMLWALRKQFGGTISSFAI 152 (178)
T ss_dssp CSEEEECC-TTC---T----THHHHHHHTCCTTCEEEEEECS--HHHHHHHHHHHHHHCCEEEEEEE
T ss_pred CCEEEECCcccH---H----HHHHHHHHhcCCCCEEEEEeec--cccHHHHHHHHHHcCCeeEEEEe
Confidence 999999988866 2 3899999999999999986543 23445566777887876554443
No 81
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.30 E-value=3.8e-12 Score=119.46 Aligned_cols=112 Identities=12% Similarity=0.046 Sum_probs=81.2
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHh-CCCCeeeecc-cCCCCC-CCccchheecccccCccCh
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALR-GLVPLYITIN-QRVPFF-DNTLDLIHTTRFLDGWIDF 403 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~r-glip~~~~~a-e~LPFp-d~SFDlV~ss~vL~h~~d~ 403 (480)
.+|||+|||+|.++..+++.+..+++++++. .+......+ ..+.+..++. +.+|++ +++||+|++.. +.
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~------~~ 121 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQAARWAAYDFSP--ELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRR------GP 121 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGGSSEEEEEESCH--HHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEES------CC
T ss_pred CeEEEeCCCCCHHHHHHHHcCCEEEEEECCH--HHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCC------CH
Confidence 4899999999999999999988999988752 333333332 2345556665 789999 99999999862 22
Q ss_pred hcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEE
Q 046488 404 VLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKW 452 (480)
Q Consensus 404 ~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W 452 (480)
..++.++.|+|||||+++...-+. ....+...++..||.....
T Consensus 122 ---~~~l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~l~~~Gf~~~~~ 164 (226)
T 3m33_A 122 ---TSVILRLPELAAPDAHFLYVGPRL---NVPEVPERLAAVGWDIVAE 164 (226)
T ss_dssp ---SGGGGGHHHHEEEEEEEEEEESSS---CCTHHHHHHHHTTCEEEEE
T ss_pred ---HHHHHHHHHHcCCCcEEEEeCCcC---CHHHHHHHHHHCCCeEEEE
Confidence 248999999999999988332221 2234667788889876554
No 82
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.30 E-value=1.8e-11 Score=112.22 Aligned_cols=130 Identities=13% Similarity=0.128 Sum_probs=88.3
Q ss_pred CeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChhHHH----HHHHhCC--CCeeeecccCCCCCCCccchheecccccC
Q 046488 327 RIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNE----MIALRGL--VPLYITINQRVPFFDNTLDLIHTTRFLDG 399 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~~~~----~iA~rgl--ip~~~~~ae~LPFpd~SFDlV~ss~vL~h 399 (480)
.+|||+|||+|.++..+++.+. .+++++++. .+.. .+...+. +.+..++. +++.+++||+|++...+++
T Consensus 62 ~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~v~~~~~d~--~~~~~~~fD~i~~~~~~~~ 137 (205)
T 3grz_A 62 LTVADVGTGSGILAIAAHKLGAKSVLATDISD--ESMTAAEENAALNGIYDIALQKTSL--LADVDGKFDLIVANILAEI 137 (205)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEESCH--HHHHHHHHHHHHTTCCCCEEEESST--TTTCCSCEEEEEEESCHHH
T ss_pred CEEEEECCCCCHHHHHHHHCCCCEEEEEECCH--HHHHHHHHHHHHcCCCceEEEeccc--cccCCCCceEEEECCcHHH
Confidence 4899999999999999998865 788888652 2222 2222232 33333433 4456799999999876643
Q ss_pred ccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEEEEeeccCCCCcceeEEEEEEeCCC
Q 046488 400 WIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKWVVVPKRDKDDREVFFSAVLEKPPR 476 (480)
Q Consensus 400 ~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W~~~~k~d~~~~E~~lsav~qKP~~ 476 (480)
+ ..++.++.|+|||||++++..+.. .+.+.+.+.++..||+.+..... ++ +.+.+.++|.+
T Consensus 138 ~------~~~l~~~~~~L~~gG~l~~~~~~~--~~~~~~~~~~~~~Gf~~~~~~~~-------~~-w~~~~~~~~~~ 198 (205)
T 3grz_A 138 L------LDLIPQLDSHLNEDGQVIFSGIDY--LQLPKIEQALAENSFQIDLKMRA-------GR-WIGLAISRKHE 198 (205)
T ss_dssp H------HHHGGGSGGGEEEEEEEEEEEEEG--GGHHHHHHHHHHTTEEEEEEEEE-------TT-EEEEEEEECC-
T ss_pred H------HHHHHHHHHhcCCCCEEEEEecCc--ccHHHHHHHHHHcCCceEEeecc-------CC-EEEEEEecccc
Confidence 2 468999999999999999976543 34566778889999987654321 23 33556666655
No 83
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.30 E-value=4.5e-11 Score=109.77 Aligned_cols=120 Identities=13% Similarity=0.067 Sum_probs=83.1
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhCC--CEEEEEecCCChhHHH----HHHHhCC--CCeeeecccCCCCCCCcc
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREFN--VTLVSAIINLGAPFNE----MIALRGL--VPLYITINQRVPFFDNTL 388 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~g--V~Vv~vd~d~~~~~~~----~iA~rgl--ip~~~~~ae~LPFpd~SF 388 (480)
..+.+.++ .+|||+|||+|.++..+++.+ ..+++++++. .+.. .+...+. +.+..++........++|
T Consensus 34 ~~l~~~~~--~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 109 (204)
T 3e05_A 34 SKLRLQDD--LVMWDIGAGSASVSIEASNLMPNGRIFALERNP--QYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDP 109 (204)
T ss_dssp HHTTCCTT--CEEEEETCTTCHHHHHHHHHCTTSEEEEEECCH--HHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCC
T ss_pred HHcCCCCC--CEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCH--HHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCC
Confidence 44555555 489999999999999999876 7888888652 2222 2222232 334445543333344789
Q ss_pred chheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCce
Q 046488 389 DLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYK 448 (480)
Q Consensus 389 DlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfk 448 (480)
|+|++...+. + ...++.++.|+|||||++++.... .+..+.+.+.+++.||.
T Consensus 110 D~i~~~~~~~---~---~~~~l~~~~~~LkpgG~l~~~~~~--~~~~~~~~~~l~~~g~~ 161 (204)
T 3e05_A 110 DRVFIGGSGG---M---LEEIIDAVDRRLKSEGVIVLNAVT--LDTLTKAVEFLEDHGYM 161 (204)
T ss_dssp SEEEESCCTT---C---HHHHHHHHHHHCCTTCEEEEEECB--HHHHHHHHHHHHHTTCE
T ss_pred CEEEECCCCc---C---HHHHHHHHHHhcCCCeEEEEEecc--cccHHHHHHHHHHCCCc
Confidence 9999887664 2 256999999999999999986432 34456677888999983
No 84
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.30 E-value=8.5e-13 Score=125.87 Aligned_cols=118 Identities=15% Similarity=0.037 Sum_probs=74.9
Q ss_pred CeEEEECCCCcHHHHHHhhCC-CEEEEEecCCChhHHHHHHHh----CCC--Ceeeeccc--CCCCCCCccchhee----
Q 046488 327 RIGLDFSIGTGTFAARMREFN-VTLVSAIINLGAPFNEMIALR----GLV--PLYITINQ--RVPFFDNTLDLIHT---- 393 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~g-V~Vv~vd~d~~~~~~~~iA~r----gli--p~~~~~ae--~LPFpd~SFDlV~s---- 393 (480)
.+|||||||+|.++..+++++ ..+++++++ ..+. ..|++ ... .+..+.++ ..++++++||.|+.
T Consensus 62 ~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~--~~~~-~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~ 138 (236)
T 3orh_A 62 GRVLEVGFGMAIAASKVQEAPIDEHWIIECN--DGVF-QRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp EEEEEECCTTSHHHHHHTTSCEEEEEEEECC--HHHH-HHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred CeEEEECCCccHHHHHHHHhCCcEEEEEeCC--HHHH-HHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeee
Confidence 489999999999999999874 456666655 2333 23322 222 22334433 34688999999874
Q ss_pred -cccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChh----------h--HHHHHHHHHHcCceee
Q 046488 394 -TRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKE----------D--MNDYLEVFKMLKYKKH 450 (480)
Q Consensus 394 -s~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~e----------d--L~~~~~~l~~lGfkkl 450 (480)
...+.|+.+. ..++.|+.|||||||+|++.+.....+ . .+.+...+.+.||+..
T Consensus 139 ~~~~~~~~~~~---~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~eaGF~~~ 205 (236)
T 3orh_A 139 LSEETWHTHQF---NFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRRE 205 (236)
T ss_dssp CBGGGTTTHHH---HHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHHTCCGG
T ss_pred cccchhhhcch---hhhhhhhhheeCCCCEEEEEecCCchhhhhhhhhhhhhhhHHHHHHHHHHcCCeEE
Confidence 3444455444 579999999999999998864211110 1 1234456777899743
No 85
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.29 E-value=1.7e-11 Score=122.94 Aligned_cols=123 Identities=20% Similarity=0.110 Sum_probs=84.9
Q ss_pred CCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHH----HHHHhC---CCCeeeecccCCCCCCCccchheeccc
Q 046488 326 IRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNE----MIALRG---LVPLYITINQRVPFFDNTLDLIHTTRF 396 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~----~iA~rg---lip~~~~~ae~LPFpd~SFDlV~ss~v 396 (480)
..+|||||||+|.++..++++ +..++++|+ ..+.. .+...+ .+.+..++... +++. .||+|++..+
T Consensus 183 ~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~---~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~v 257 (374)
T 1qzz_A 183 VRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL---AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV-TADVVLLSFV 257 (374)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC---HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-CEEEEEEESC
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC---HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-CCCEEEEecc
Confidence 358999999999999999886 567777774 23322 222233 23444454332 3443 3999999999
Q ss_pred ccCccChhcHHHHHHHHHhcccCCcEEEEeec--cCChh----------------------hHHHHHHHHHHcCceeeEE
Q 046488 397 LDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF--FCAKE----------------------DMNDYLEVFKMLKYKKHKW 452 (480)
Q Consensus 397 L~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f--~~~~e----------------------dL~~~~~~l~~lGfkkl~W 452 (480)
+++|.+... ..++.++.|+|||||+++|.++ ..+.. ..+++.++++..||+.+.+
T Consensus 258 l~~~~~~~~-~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~ 336 (374)
T 1qzz_A 258 LLNWSDEDA-LTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASE 336 (374)
T ss_dssp GGGSCHHHH-HHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEE
T ss_pred ccCCCHHHH-HHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEE
Confidence 999976532 4699999999999999998766 32210 2345778999999998765
Q ss_pred EE
Q 046488 453 VV 454 (480)
Q Consensus 453 ~~ 454 (480)
..
T Consensus 337 ~~ 338 (374)
T 1qzz_A 337 RT 338 (374)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 86
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.28 E-value=9.5e-12 Score=117.22 Aligned_cols=98 Identities=19% Similarity=0.198 Sum_probs=71.3
Q ss_pred CCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHH----HHHhC-CCCeeeecccCCCCCCCccchheecccccCc
Q 046488 326 IRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEM----IALRG-LVPLYITINQRVPFFDNTLDLIHTTRFLDGW 400 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~----iA~rg-lip~~~~~ae~LPFpd~SFDlV~ss~vL~h~ 400 (480)
..+|||+|||+|.++..|+++|..+++++++. .+... ....+ .+.+..++...++++ ++||+|++.....++
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~--~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~ 118 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAERGYEVVGLDLHE--EMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMY 118 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGG
T ss_pred CCEEEEeCCCCCHHHHHHHHCCCeEEEEECCH--HHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCchhc
Confidence 35899999999999999999999999988752 23222 22222 244556667777765 789999986543333
Q ss_pred cChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 401 IDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 401 ~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
.+......++.++.|+|||||++++.
T Consensus 119 ~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 119 FDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 33334478999999999999999874
No 87
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.28 E-value=5.4e-11 Score=110.98 Aligned_cols=127 Identities=10% Similarity=-0.058 Sum_probs=87.2
Q ss_pred HHHhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHH----HHHhCC---CCeeeecccCCCCCCCc
Q 046488 315 IPEVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEM----IALRGL---VPLYITINQRVPFFDNT 387 (480)
Q Consensus 315 I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~----iA~rgl---ip~~~~~ae~LPFpd~S 387 (480)
+-..+.+.++ .+|||+|||+|.++..+++++..+++++++. .+... ++..+. +.+..+++.........
T Consensus 47 ~l~~l~~~~~--~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~--~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~ 122 (204)
T 3njr_A 47 TLAALAPRRG--ELLWDIGGGSGSVSVEWCLAGGRAITIEPRA--DRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPL 122 (204)
T ss_dssp HHHHHCCCTT--CEEEEETCTTCHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCC
T ss_pred HHHhcCCCCC--CEEEEecCCCCHHHHHHHHcCCEEEEEeCCH--HHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCC
Confidence 3345556555 4899999999999999999888899988763 22221 222222 33445555553223467
Q ss_pred cchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEEEEe
Q 046488 388 LDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKWVVV 455 (480)
Q Consensus 388 FDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W~~~ 455 (480)
||+|++...+ + .. ++.++.|+|||||++++.... .+++..+.+.++..|++...+...
T Consensus 123 ~D~v~~~~~~----~---~~-~l~~~~~~LkpgG~lv~~~~~--~~~~~~~~~~l~~~g~~i~~i~~~ 180 (204)
T 3njr_A 123 PEAVFIGGGG----S---QA-LYDRLWEWLAPGTRIVANAVT--LESETLLTQLHARHGGQLLRIDIA 180 (204)
T ss_dssp CSEEEECSCC----C---HH-HHHHHHHHSCTTCEEEEEECS--HHHHHHHHHHHHHHCSEEEEEEEE
T ss_pred CCEEEECCcc----c---HH-HHHHHHHhcCCCcEEEEEecC--cccHHHHHHHHHhCCCcEEEEEee
Confidence 9999986643 2 25 899999999999999986432 455667778888889876665554
No 88
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.28 E-value=3.6e-11 Score=107.04 Aligned_cols=120 Identities=16% Similarity=0.149 Sum_probs=81.9
Q ss_pred HHhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHH----HHHHhCC---CCeeeecccCCCCCC-Cc
Q 046488 316 PEVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNE----MIALRGL---VPLYITINQRVPFFD-NT 387 (480)
Q Consensus 316 ~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~----~iA~rgl---ip~~~~~ae~LPFpd-~S 387 (480)
.+.+.+.++ .+|||+|||+|.++..+++.+..+++++.+. .+.. .+...+. +.+..++... ++++ ++
T Consensus 26 ~~~~~~~~~--~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~--~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~ 100 (192)
T 1l3i_A 26 MCLAEPGKN--DVAVDVGCGTGGVTLELAGRVRRVYAIDRNP--EAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPD 100 (192)
T ss_dssp HHHHCCCTT--CEEEEESCTTSHHHHHHHTTSSEEEEEESCH--HHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCC
T ss_pred HHhcCCCCC--CEEEEECCCCCHHHHHHHHhcCEEEEEECCH--HHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCC
Confidence 344555555 4899999999999999998877888888652 2222 1222222 2333344333 3333 58
Q ss_pred cchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCce
Q 046488 388 LDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYK 448 (480)
Q Consensus 388 FDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfk 448 (480)
||+|++...++++ ..++.++.|+|||||++++..+. .+....+.+.++..||.
T Consensus 101 ~D~v~~~~~~~~~------~~~l~~~~~~l~~gG~l~~~~~~--~~~~~~~~~~l~~~g~~ 153 (192)
T 1l3i_A 101 IDIAVVGGSGGEL------QEILRIIKDKLKPGGRIIVTAIL--LETKFEAMECLRDLGFD 153 (192)
T ss_dssp EEEEEESCCTTCH------HHHHHHHHHTEEEEEEEEEEECB--HHHHHHHHHHHHHTTCC
T ss_pred CCEEEECCchHHH------HHHHHHHHHhcCCCcEEEEEecC--cchHHHHHHHHHHCCCc
Confidence 9999998776432 46899999999999999886543 34556677888999983
No 89
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.27 E-value=1.4e-11 Score=114.40 Aligned_cols=138 Identities=13% Similarity=0.150 Sum_probs=88.3
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCC-------C----Cccchheecc
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFF-------D----NTLDLIHTTR 395 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFp-------d----~SFDlV~ss~ 395 (480)
.+|||+|||+|.++..+++++..++++|++...+ ...+.+..++....+.. . ++||+|+|..
T Consensus 27 ~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~-------~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~ 99 (191)
T 3dou_A 27 DAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEE-------IAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDA 99 (191)
T ss_dssp CEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCC-------CTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECC
T ss_pred CEEEEEeecCCHHHHHHHHcCCcEEEEecccccc-------CCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCC
Confidence 4899999999999999999988899998764211 11344555665554421 1 4999999864
Q ss_pred cccC---c-cC----hhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEEEEeeccCCCCcceeE
Q 046488 396 FLDG---W-ID----FVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKWVVVPKRDKDDREVFF 467 (480)
Q Consensus 396 vL~h---~-~d----~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W~~~~k~d~~~~E~~l 467 (480)
.... + .+ ......++.++.|+|||||.|++..|.... ...+...++. .|.++.+...........|.|+
T Consensus 100 ~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~--~~~~~~~l~~-~F~~v~~~kP~asR~~s~E~y~ 176 (191)
T 3dou_A 100 MAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM--TNDFIAIWRK-NFSSYKISKPPASRGSSSEIYI 176 (191)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH--HHHHHHHHGG-GEEEEEEECC------CCEEEE
T ss_pred CcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC--HHHHHHHHHH-hcCEEEEECCCCccCCCceEEE
Confidence 3211 1 01 111246899999999999999987765443 3345555554 3777765443222225689999
Q ss_pred EEEEEeC
Q 046488 468 SAVLEKP 474 (480)
Q Consensus 468 sav~qKP 474 (480)
.+.-.|.
T Consensus 177 v~~~~~~ 183 (191)
T 3dou_A 177 MFFGFKA 183 (191)
T ss_dssp EEEEECC
T ss_pred EEeeecc
Confidence 8766554
No 90
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.27 E-value=4e-11 Score=106.86 Aligned_cols=127 Identities=17% Similarity=0.142 Sum_probs=82.2
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCCh--hHHHHHHHhCC----CCeeeecccCCCCCCCccch
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGA--PFNEMIALRGL----VPLYITINQRVPFFDNTLDL 390 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~--~~~~~iA~rgl----ip~~~~~ae~LPFpd~SFDl 390 (480)
+.+...++ .+|||+|||+|.++..+++.+..+++++++... .+...+...+. +.+..++... ++++++||+
T Consensus 46 ~~~~~~~~--~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~ 122 (194)
T 1dus_A 46 ENVVVDKD--DDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKDRKYNK 122 (194)
T ss_dssp HHCCCCTT--CEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTTSCEEE
T ss_pred HHcccCCC--CeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc-ccccCCceE
Confidence 44455444 489999999999999999888888888876311 11112222232 3334444443 445789999
Q ss_pred heecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeE
Q 046488 391 IHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHK 451 (480)
Q Consensus 391 V~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~ 451 (480)
|++...+++.. ..+..++.++.|+|||||++++..+.. .....+.+.+++. |..+.
T Consensus 123 v~~~~~~~~~~--~~~~~~l~~~~~~L~~gG~l~~~~~~~--~~~~~~~~~l~~~-~~~~~ 178 (194)
T 1dus_A 123 IITNPPIRAGK--EVLHRIIEEGKELLKDNGEIWVVIQTK--QGAKSLAKYMKDV-FGNVE 178 (194)
T ss_dssp EEECCCSTTCH--HHHHHHHHHHHHHEEEEEEEEEEEEST--HHHHHHHHHHHHH-HSCCE
T ss_pred EEECCCcccch--hHHHHHHHHHHHHcCCCCEEEEEECCC--CChHHHHHHHHHH-hcceE
Confidence 99987765422 223679999999999999999976543 2233355555554 54444
No 91
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.27 E-value=3.7e-11 Score=120.54 Aligned_cols=125 Identities=19% Similarity=0.204 Sum_probs=88.6
Q ss_pred CCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCC--hhHHHHHHHhCC---CCeeeecccCCCCCCCccchheeccccc
Q 046488 326 IRIGLDFSIGTGTFAARMREF--NVTLVSAIINLG--APFNEMIALRGL---VPLYITINQRVPFFDNTLDLIHTTRFLD 398 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~--~~~~~~iA~rgl---ip~~~~~ae~LPFpd~SFDlV~ss~vL~ 398 (480)
..+|||||||+|.++..++++ +..++++|+ .. ..+...++..+. +.+..++....|+++. |+|++..+++
T Consensus 191 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--D~v~~~~vlh 267 (359)
T 1x19_A 191 VKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA--DAVLFCRILY 267 (359)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC--SEEEEESCGG
T ss_pred CCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC--CEEEEechhc
Confidence 358999999999999999886 567777775 21 112222222232 4455566666677665 9999999999
Q ss_pred CccChhcHHHHHHHHHhcccCCcEEEEeeccCC-------------------h------hhHHHHHHHHHHcCceeeEEE
Q 046488 399 GWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCA-------------------K------EDMNDYLEVFKMLKYKKHKWV 453 (480)
Q Consensus 399 h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~-------------------~------edL~~~~~~l~~lGfkkl~W~ 453 (480)
+|.+.. ...++.++.|+|||||+++|.++... . -..++|.+++++.||+.+.+.
T Consensus 268 ~~~d~~-~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v~~~ 346 (359)
T 1x19_A 268 SANEQL-STIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYKDVTMV 346 (359)
T ss_dssp GSCHHH-HHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEEEEE
T ss_pred cCCHHH-HHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCceEEEE
Confidence 997643 26799999999999999988653211 1 123467889999999987754
Q ss_pred E
Q 046488 454 V 454 (480)
Q Consensus 454 ~ 454 (480)
.
T Consensus 347 ~ 347 (359)
T 1x19_A 347 R 347 (359)
T ss_dssp E
T ss_pred e
Confidence 4
No 92
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.26 E-value=2.1e-11 Score=120.91 Aligned_cols=123 Identities=12% Similarity=0.073 Sum_probs=86.9
Q ss_pred CCCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHH----HHHHhCC---CCeeeecccCCCCCCCccchheecc
Q 046488 325 EIRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNE----MIALRGL---VPLYITINQRVPFFDNTLDLIHTTR 395 (480)
Q Consensus 325 ~iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~----~iA~rgl---ip~~~~~ae~LPFpd~SFDlV~ss~ 395 (480)
...+|||||||+|.++..++++ +..++++|+ ..+.. .+...+. +.+..++.. .|++. +||+|++..
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~ 243 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL---QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSA 243 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC---HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEES
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC---HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEeh
Confidence 3468999999999999999875 566777664 22222 2222232 444445543 35555 899999999
Q ss_pred cccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChh-------------------hHHHHHHHHHHcCceeeEEE
Q 046488 396 FLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKE-------------------DMNDYLEVFKMLKYKKHKWV 453 (480)
Q Consensus 396 vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~e-------------------dL~~~~~~l~~lGfkkl~W~ 453 (480)
++++|.++.. ..++.+++|+|||||+++|.++..... ..++|.++++..||+.+...
T Consensus 244 vlh~~~~~~~-~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 319 (332)
T 3i53_A 244 VLHDWDDLSA-VAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAH 319 (332)
T ss_dssp CGGGSCHHHH-HHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred hhccCCHHHH-HHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 9999987632 679999999999999999876433220 13468889999999987644
No 93
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.26 E-value=3.9e-12 Score=126.59 Aligned_cols=98 Identities=12% Similarity=0.012 Sum_probs=66.4
Q ss_pred CeEEEECCCCcHHHHHHhhC-CCEEEEEecCCChhHHHHH----HHhCC--------CCeeeecc------cCC--CCCC
Q 046488 327 RIGLDFSIGTGTFAARMREF-NVTLVSAIINLGAPFNEMI----ALRGL--------VPLYITIN------QRV--PFFD 385 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~-gV~Vv~vd~d~~~~~~~~i----A~rgl--------ip~~~~~a------e~L--PFpd 385 (480)
.+|||||||+|..+..++.. +..++++|++. .+...+ ...+. +.+.+.++ +.| ++++
T Consensus 50 ~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~--~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 50 RKVLAIDFGNGADLEKYFYGEIALLVATDPDA--DAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp CEEEETTCTTTTTHHHHHHTTCSEEEEEESCH--HHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CeEEEEecCCcHhHHHHHhcCCCeEEEEECCH--HHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 58999999999866655554 46888888763 333222 11221 11223322 333 4778
Q ss_pred CccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 386 NTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 386 ~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
++||+|+|..++++..+......++.++.|+|||||+|++.
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~ 168 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLIT 168 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 99999999999876433223468999999999999999886
No 94
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.25 E-value=2e-11 Score=120.16 Aligned_cols=104 Identities=9% Similarity=0.005 Sum_probs=74.2
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCC-----CCCccchh
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPF-----FDNTLDLI 391 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPF-----pd~SFDlV 391 (480)
+.+++.++ .+|||||||+|.++..|++++..|++++++ ..+...+..+-.........+.++. .+++||+|
T Consensus 39 ~~l~l~~g--~~VLDlGcGtG~~a~~La~~g~~V~gvD~S--~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~V 114 (261)
T 3iv6_A 39 FLENIVPG--STVAVIGASTRFLIEKALERGASVTVFDFS--QRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFV 114 (261)
T ss_dssp HTTTCCTT--CEEEEECTTCHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEE
T ss_pred HhcCCCCc--CEEEEEeCcchHHHHHHHhcCCEEEEEECC--HHHHHHHHHHHHhccceeeeeecccccccccCCCccEE
Confidence 34455555 489999999999999999999999998865 2343333222111122233333333 36799999
Q ss_pred eecccccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 392 HTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 392 ~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
++..+++|+...+ +..++.++.|+| |||.++++
T Consensus 115 v~~~~l~~~~~~~-~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 115 LNDRLINRFTTEE-ARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp EEESCGGGSCHHH-HHHHHHHHHHHH-TTSEEEEE
T ss_pred EEhhhhHhCCHHH-HHHHHHHHHHhC-cCcEEEEE
Confidence 9999999886543 367999999999 99999987
No 95
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.25 E-value=5e-11 Score=119.06 Aligned_cols=132 Identities=20% Similarity=0.123 Sum_probs=88.3
Q ss_pred hcCCCCCCCCeEEEECCCCcHHHHHHhhC--CCEEEEEec-CCChhHHHHHHHhCC---CCeeeecccCCCCCCCccchh
Q 046488 318 VLDIKPGEIRIGLDFSIGTGTFAARMREF--NVTLVSAII-NLGAPFNEMIALRGL---VPLYITINQRVPFFDNTLDLI 391 (480)
Q Consensus 318 vL~l~~g~iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~-d~~~~~~~~iA~rgl---ip~~~~~ae~LPFpd~SFDlV 391 (480)
.+++.++ .+|||||||+|.++..++++ ++.++++++ .....+...+...+. +.+..++... +++. .||+|
T Consensus 178 ~~~~~~~--~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v 253 (360)
T 1tw3_A 178 AYDWTNV--RHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-KADAI 253 (360)
T ss_dssp HSCCTTC--SEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-CEEEE
T ss_pred hCCCccC--cEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-CccEE
Confidence 3444433 58999999999999999876 567777774 111112222233332 3444454332 3444 39999
Q ss_pred eecccccCccChhcHHHHHHHHHhcccCCcEEEEeecc-CChh----------------------hHHHHHHHHHHcCce
Q 046488 392 HTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFF-CAKE----------------------DMNDYLEVFKMLKYK 448 (480)
Q Consensus 392 ~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~-~~~e----------------------dL~~~~~~l~~lGfk 448 (480)
++..++++|.+... ..++.++.|+|||||++++.++. .+.. ..++|.++++..||+
T Consensus 254 ~~~~vl~~~~~~~~-~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 332 (360)
T 1tw3_A 254 ILSFVLLNWPDHDA-VRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLV 332 (360)
T ss_dssp EEESCGGGSCHHHH-HHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEE
T ss_pred EEcccccCCCHHHH-HHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCe
Confidence 99999999976532 46999999999999999987654 2110 124577899999999
Q ss_pred eeEEEE
Q 046488 449 KHKWVV 454 (480)
Q Consensus 449 kl~W~~ 454 (480)
.+.+..
T Consensus 333 ~~~~~~ 338 (360)
T 1tw3_A 333 VEEVRQ 338 (360)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 876544
No 96
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.25 E-value=1e-10 Score=112.29 Aligned_cols=141 Identities=11% Similarity=0.129 Sum_probs=90.4
Q ss_pred CCchhhh-hHHHhcCCC-CCCCCeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChhHHH----HHHHhCC---CCeeee
Q 046488 307 TNLTADF-LIPEVLDIK-PGEIRIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNE----MIALRGL---VPLYIT 376 (480)
Q Consensus 307 ~~~~ad~-~I~~vL~l~-~g~iR~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~~~~----~iA~rgl---ip~~~~ 376 (480)
+..+.|. ++...+.+. ++ .+|||+|||+|.++..+++++. .+++++++. .+.. .+...+. +.++.+
T Consensus 31 ~~~~~d~~ll~~~~~~~~~~--~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~--~~~~~a~~n~~~~~~~~~v~~~~~ 106 (259)
T 3lpm_A 31 FSFSIDAVLLAKFSYLPIRK--GKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQE--RLADMAKRSVAYNQLEDQIEIIEY 106 (259)
T ss_dssp BCCCHHHHHHHHHCCCCSSC--CEEEETTCTTTHHHHHHHTTCCCEEEEECCSH--HHHHHHHHHHHHTTCTTTEEEECS
T ss_pred ccCcHHHHHHHHHhcCCCCC--CEEEEcCCchhHHHHHHHHhcCCcEEEEECCH--HHHHHHHHHHHHCCCcccEEEEEC
Confidence 4444554 344555555 44 4899999999999999998854 788887652 2222 2222232 344555
Q ss_pred cccCCC--CCCCccchheecccccCc-----c------------ChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHH
Q 046488 377 INQRVP--FFDNTLDLIHTTRFLDGW-----I------------DFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMND 437 (480)
Q Consensus 377 ~ae~LP--Fpd~SFDlV~ss~vL~h~-----~------------d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~ 437 (480)
++..++ +++++||+|+++-.+... . ....+..++.++.|+|||||++++.. ..+.+.+
T Consensus 107 D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~---~~~~~~~ 183 (259)
T 3lpm_A 107 DLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH---RPERLLD 183 (259)
T ss_dssp CGGGGGGTSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE---CTTTHHH
T ss_pred cHHHhhhhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE---cHHHHHH
Confidence 555554 568999999996333211 0 11234579999999999999999842 3345566
Q ss_pred HHHHHHHcCceeeEEEE
Q 046488 438 YLEVFKMLKYKKHKWVV 454 (480)
Q Consensus 438 ~~~~l~~lGfkkl~W~~ 454 (480)
+...++..||.......
T Consensus 184 ~~~~l~~~~~~~~~~~~ 200 (259)
T 3lpm_A 184 IIDIMRKYRLEPKRIQF 200 (259)
T ss_dssp HHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHCCCceEEEEE
Confidence 77788888887665443
No 97
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.25 E-value=4.2e-11 Score=109.05 Aligned_cols=138 Identities=14% Similarity=0.145 Sum_probs=86.1
Q ss_pred CCCCCCCeEEEECCCCcHHHHHHhhC----CCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCC--------------
Q 046488 321 IKPGEIRIGLDFSIGTGTFAARMREF----NVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVP-------------- 382 (480)
Q Consensus 321 l~~g~iR~VLDVGCGtG~fAa~Lae~----gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LP-------------- 382 (480)
+.++ .+|||+|||+|.++..++++ +..+++++++.... ...+.+..++...++
T Consensus 20 ~~~~--~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~-------~~~v~~~~~d~~~~~~~~~~~~~~i~~~~ 90 (201)
T 2plw_A 20 LKKN--KIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDP-------IPNVYFIQGEIGKDNMNNIKNINYIDNMN 90 (201)
T ss_dssp CCTT--EEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCC-------CTTCEEEECCTTTTSSCCC----------
T ss_pred CCCC--CEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCC-------CCCceEEEccccchhhhhhcccccccccc
Confidence 3444 48999999999999999876 36788888764211 112444555555555
Q ss_pred -----------CCCCccchheecccccCcc----Chh----cHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHH
Q 046488 383 -----------FFDNTLDLIHTTRFLDGWI----DFV----LLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFK 443 (480)
Q Consensus 383 -----------Fpd~SFDlV~ss~vL~h~~----d~~----~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~ 443 (480)
+++++||+|++..++++.. +.. ....++.++.|+|||||+|++..+.. ++...+...++
T Consensus 91 ~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~--~~~~~l~~~l~ 168 (201)
T 2plw_A 91 NNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLG--SQTNNLKTYLK 168 (201)
T ss_dssp -CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS--TTHHHHHHHHH
T ss_pred chhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCC--CCHHHHHHHHH
Confidence 6788999999977654321 111 01247899999999999999866543 23344455555
Q ss_pred HcCceeeEEEEeeccCCCCcceeEEEE
Q 046488 444 MLKYKKHKWVVVPKRDKDDREVFFSAV 470 (480)
Q Consensus 444 ~lGfkkl~W~~~~k~d~~~~E~~lsav 470 (480)
. .|..+.+...........|.|+.+.
T Consensus 169 ~-~f~~v~~~~~~~~r~~s~e~y~v~~ 194 (201)
T 2plw_A 169 G-MFQLVHTTKPKASRNESREIYLVCK 194 (201)
T ss_dssp T-TEEEEEECCCC-----CCEEEEEEE
T ss_pred H-HHheEEEECCcccCCcCceEEEEEe
Confidence 5 3666554322111114568887654
No 98
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.25 E-value=9e-12 Score=117.13 Aligned_cols=101 Identities=11% Similarity=-0.027 Sum_probs=73.0
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhC---CCCeeeecccCCCCCC-----Cccchheeccccc
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRG---LVPLYITINQRVPFFD-----NTLDLIHTTRFLD 398 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rg---lip~~~~~ae~LPFpd-----~SFDlV~ss~vL~ 398 (480)
.+|||+|||+|.++..|++.+..+++++++. .+......+. .+.+..++...+++.. ..||+|++..+++
T Consensus 58 ~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~~ 135 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQFFPRVIGLDVSK--SALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGFH 135 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHHSSCEEEEESCH--HHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSST
T ss_pred CeEEEEcCCCCHHHHHHHHhCCCEEEEECCH--HHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcchhh
Confidence 4799999999999999999877888888652 3333322221 2344555555555432 3499999999998
Q ss_pred CccChhcHHHHHHHHHhcccCCcEEEEeeccC
Q 046488 399 GWIDFVLLDFILYDWDRVLRPGGLLWIDSFFC 430 (480)
Q Consensus 399 h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~ 430 (480)
|+.+. ....++.++.|+|||||++++.++..
T Consensus 136 ~~~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 136 HIPVE-KRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp TSCGG-GHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred cCCHH-HHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 87633 23679999999999999988876543
No 99
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.25 E-value=3.8e-11 Score=116.58 Aligned_cols=124 Identities=13% Similarity=0.072 Sum_probs=82.2
Q ss_pred cCCCCCCCCeEEEECCCCcHHHHHHhhC-C--CEEEEEecCCChhHHHHHHH----hCCCCeeeec---ccCCCCCCCcc
Q 046488 319 LDIKPGEIRIGLDFSIGTGTFAARMREF-N--VTLVSAIINLGAPFNEMIAL----RGLVPLYITI---NQRVPFFDNTL 388 (480)
Q Consensus 319 L~l~~g~iR~VLDVGCGtG~fAa~Lae~-g--V~Vv~vd~d~~~~~~~~iA~----rglip~~~~~---ae~LPFpd~SF 388 (480)
|.++||+ +|||+|||+|.++..+++. | -.|++++++ +.+...+.. ++.+..+..+ .+..++.++++
T Consensus 73 l~ikpG~--~VldlG~G~G~~~~~la~~VG~~G~V~avD~s--~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~v 148 (233)
T 4df3_A 73 LPVKEGD--RILYLGIASGTTASHMSDIIGPRGRIYGVEFA--PRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGV 148 (233)
T ss_dssp CCCCTTC--EEEEETCTTSHHHHHHHHHHCTTCEEEEEECC--HHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCE
T ss_pred cCCCCCC--EEEEecCcCCHHHHHHHHHhCCCceEEEEeCC--HHHHHHHHHhhHhhcCeeEEEEeccCccccccccceE
Confidence 4577886 8999999999999999985 3 356666654 344443322 2233334433 45578889999
Q ss_pred chheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccC-------ChhhHHHHHHHHHHcCceeeE
Q 046488 389 DLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFC-------AKEDMNDYLEVFKMLKYKKHK 451 (480)
Q Consensus 389 DlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~-------~~edL~~~~~~l~~lGfkkl~ 451 (480)
|+|++... +..+. ..++.++.|+|||||++++..... ..+..+...+.++..||+.+.
T Consensus 149 DvVf~d~~--~~~~~---~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e 213 (233)
T 4df3_A 149 DGLYADVA--QPEQA---AIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKD 213 (233)
T ss_dssp EEEEECCC--CTTHH---HHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEE
T ss_pred EEEEEecc--CChhH---HHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEE
Confidence 99986432 22222 568999999999999998863222 122234455677888998654
No 100
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.24 E-value=2.6e-11 Score=110.35 Aligned_cols=149 Identities=16% Similarity=0.110 Sum_probs=91.3
Q ss_pred CCCCCCCeEEEECCCCcHHHHHHhhC---CCEEEEEecCCChhHHH----HHHHhCC---CCeeeecccCCC-CCCCccc
Q 046488 321 IKPGEIRIGLDFSIGTGTFAARMREF---NVTLVSAIINLGAPFNE----MIALRGL---VPLYITINQRVP-FFDNTLD 389 (480)
Q Consensus 321 l~~g~iR~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~~~~~----~iA~rgl---ip~~~~~ae~LP-Fpd~SFD 389 (480)
++++. +|||+|||+|.++..++++ +..+++++++. .+.. .+...+. +.+..++++.++ +.+++||
T Consensus 20 ~~~~~--~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD 95 (197)
T 3eey_A 20 VKEGD--TVVDATCGNGNDTAFLASLVGENGRVFGFDIQD--KAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVK 95 (197)
T ss_dssp CCTTC--EEEESCCTTSHHHHHHHHHHCTTCEEEEECSCH--HHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEE
T ss_pred CCCCC--EEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCH--HHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCce
Confidence 44553 8999999999999999886 24788887652 2222 2222222 344556666665 7789999
Q ss_pred hheecccccCc------cChhcHHHHHHHHHhcccCCcEEEEeeccCCh---hhHHHHHHHHHH---cCceeeEEEEeec
Q 046488 390 LIHTTRFLDGW------IDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK---EDMNDYLEVFKM---LKYKKHKWVVVPK 457 (480)
Q Consensus 390 lV~ss~vL~h~------~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~---edL~~~~~~l~~---lGfkkl~W~~~~k 457 (480)
+|++...+... ........++.++.|+|||||++++..|.... ++...+.+.++. .+|....+....+
T Consensus 96 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~~ 175 (197)
T 3eey_A 96 AVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQ 175 (197)
T ss_dssp EEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETTC
T ss_pred EEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEeccC
Confidence 99987655221 11112246999999999999999988654322 123334444443 4577666666544
Q ss_pred cCCCCcceeEEEEEEeCCCC
Q 046488 458 RDKDDREVFFSAVLEKPPRP 477 (480)
Q Consensus 458 ~d~~~~E~~lsav~qKP~~~ 477 (480)
.+. .. + ..|.||-..+
T Consensus 176 ~~~--pp-~-~~~~~~~~~~ 191 (197)
T 3eey_A 176 ANC--PP-I-LVCIEKISEG 191 (197)
T ss_dssp CSC--CC-E-EEEEEECCSS
T ss_pred ccC--CC-e-EEEEEEcccc
Confidence 221 22 2 3456665553
No 101
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.24 E-value=7.3e-12 Score=125.56 Aligned_cols=122 Identities=14% Similarity=0.007 Sum_probs=83.8
Q ss_pred CCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHHHH--HHhC---CCCeeeecccCCCCCCCccchheeccccc
Q 046488 326 IRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNEMI--ALRG---LVPLYITINQRVPFFDNTLDLIHTTRFLD 398 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~i--A~rg---lip~~~~~ae~LPFpd~SFDlV~ss~vL~ 398 (480)
..+|||||||+|.++..++++ ++.++++++. ....+. ...+ .+.+..++.. .+++ +||+|++..+++
T Consensus 185 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~---~~~~~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~vlh 258 (348)
T 3lst_A 185 TGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA---EVVARHRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKRILH 258 (348)
T ss_dssp SEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH---HHHTTCCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEESCGG
T ss_pred CceEEEECCccCHHHHHHHHHCCCCEEEEecCH---HHhhcccccccCCCCCeEEEecCCC-CCCC--CCcEEEEehhcc
Confidence 458999999999999999885 5566666642 221100 0001 1333444442 3444 899999999999
Q ss_pred CccChhcHHHHHHHHHhcccCCcEEEEeeccCCh----------------------hhHHHHHHHHHHcCceeeEEEE
Q 046488 399 GWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK----------------------EDMNDYLEVFKMLKYKKHKWVV 454 (480)
Q Consensus 399 h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~----------------------edL~~~~~~l~~lGfkkl~W~~ 454 (480)
+|.+.+. ..+|.+++|+|||||+++|.++.... ...++|.++++..||+.+....
T Consensus 259 ~~~d~~~-~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 259 NWGDEDS-VRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDRVVG 335 (348)
T ss_dssp GSCHHHH-HHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred CCCHHHH-HHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEEEE
Confidence 9987642 57999999999999999987543221 0134688999999999876543
No 102
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.24 E-value=4.9e-11 Score=118.80 Aligned_cols=140 Identities=14% Similarity=0.080 Sum_probs=93.9
Q ss_pred CCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCC-hhHHHHHHHhCC---CCeeeecccCCC-CCCCccchheeccccc
Q 046488 326 IRIGLDFSIGTGTFAARMREF--NVTLVSAIINLG-APFNEMIALRGL---VPLYITINQRVP-FFDNTLDLIHTTRFLD 398 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~-~~~~~~iA~rgl---ip~~~~~ae~LP-Fpd~SFDlV~ss~vL~ 398 (480)
..+|||||||+|.++..++++ +..++++++... ..+...+...+. +.+..++....+ +.++.||+|++..+++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vlh 259 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCLH 259 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCGG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEecccc
Confidence 458999999999999999886 567777775211 111122222232 344445544444 3567799999999999
Q ss_pred CccChhcHHHHHHHHHhcccCCcEEEEeeccCCh------------------------hhHHHHHHHHHHcCceeeEEEE
Q 046488 399 GWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK------------------------EDMNDYLEVFKMLKYKKHKWVV 454 (480)
Q Consensus 399 h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~------------------------edL~~~~~~l~~lGfkkl~W~~ 454 (480)
+|.+.. ...++.++.|+|||||++++.++.... ...++|.+++++.||+.+.-..
T Consensus 260 ~~~~~~-~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 338 (352)
T 3mcz_A 260 YFDARE-AREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGERSI 338 (352)
T ss_dssp GSCHHH-HHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred cCCHHH-HHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeeecc
Confidence 997653 367999999999999999987532111 0134578899999999776222
Q ss_pred eeccCCCCcceeEEEEEEeCC
Q 046488 455 VPKRDKDDREVFFSAVLEKPP 475 (480)
Q Consensus 455 ~~k~d~~~~E~~lsav~qKP~ 475 (480)
+ .+...+.+||.
T Consensus 339 g---------~~~l~~a~kp~ 350 (352)
T 3mcz_A 339 G---------RYTLLIGQRSS 350 (352)
T ss_dssp T---------TEEEEEEECCC
T ss_pred C---------ceEEEEEecCC
Confidence 1 13345678884
No 103
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.23 E-value=3.3e-11 Score=122.29 Aligned_cols=123 Identities=11% Similarity=0.045 Sum_probs=86.7
Q ss_pred CCCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCCCCccchheecccccCccC
Q 046488 325 EIRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFDNTLDLIHTTRFLDGWID 402 (480)
Q Consensus 325 ~iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d 402 (480)
...+|||||||+|.++..++++ +..++++++ ..+.........+.+..++... |++++ |+|++.+++|+|.+
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~ 276 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYPSINAINFDL---PHVIQDAPAFSGVEHLGGDMFD-GVPKG--DAIFIKWICHDWSD 276 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC---HHHHTTCCCCTTEEEEECCTTT-CCCCC--SEEEEESCGGGBCH
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh---HHHHHhhhhcCCCEEEecCCCC-CCCCC--CEEEEechhhcCCH
Confidence 3468999999999999999885 567777764 2222211111234455555544 66655 99999999999987
Q ss_pred hhcHHHHHHHHHhcccCCcEEEEeeccCChh---------------------------hHHHHHHHHHHcCceeeEEEE
Q 046488 403 FVLLDFILYDWDRVLRPGGLLWIDSFFCAKE---------------------------DMNDYLEVFKMLKYKKHKWVV 454 (480)
Q Consensus 403 ~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~e---------------------------dL~~~~~~l~~lGfkkl~W~~ 454 (480)
... ..+|++++|+|||||+++|.++..... ..++|.++++..||+.+....
T Consensus 277 ~~~-~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~ 354 (368)
T 3reo_A 277 EHC-LKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVAS 354 (368)
T ss_dssp HHH-HHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEEEEEE
T ss_pred HHH-HHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCeeeEEEE
Confidence 642 579999999999999999875432110 124578899999999876544
No 104
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.23 E-value=7.5e-11 Score=106.62 Aligned_cols=118 Identities=18% Similarity=0.112 Sum_probs=86.0
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCCCCccchheecccccCccCh---
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFDNTLDLIHTTRFLDGWIDF--- 403 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d~--- 403 (480)
.+|||+|||+|.++..+++++ .+++++++. .+... ...+.+..+++.. ++++++||+|+++..+++..+.
T Consensus 25 ~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~--~~~~~---~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~~~~~~~ 97 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRKRN-TVVSTDLNI--RALES---HRGGNLVRADLLC-SINQESVDVVVFNPPYVPDTDDPII 97 (170)
T ss_dssp CEEEEETCTTCHHHHHHTTTS-EEEEEESCH--HHHHT---CSSSCEEECSTTT-TBCGGGCSEEEECCCCBTTCCCTTT
T ss_pred CeEEEeccCccHHHHHHHhcC-cEEEEECCH--HHHhc---ccCCeEEECChhh-hcccCCCCEEEECCCCccCCccccc
Confidence 389999999999999999998 888888652 33322 4446666777655 7778999999998777654332
Q ss_pred ---hcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEEEE
Q 046488 404 ---VLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKWVV 454 (480)
Q Consensus 404 ---~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W~~ 454 (480)
.....++.++.+.| |||++++.... ....+.+.++++..||+......
T Consensus 98 ~~~~~~~~~~~~~~~~l-pgG~l~~~~~~--~~~~~~l~~~l~~~gf~~~~~~~ 148 (170)
T 3q87_B 98 GGGYLGREVIDRFVDAV-TVGMLYLLVIE--ANRPKEVLARLEERGYGTRILKV 148 (170)
T ss_dssp BCCGGGCHHHHHHHHHC-CSSEEEEEEEG--GGCHHHHHHHHHHTTCEEEEEEE
T ss_pred cCCcchHHHHHHHHhhC-CCCEEEEEEec--CCCHHHHHHHHHHCCCcEEEEEe
Confidence 01135889999999 99999886532 23345677888999998765443
No 105
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.23 E-value=3.9e-11 Score=107.74 Aligned_cols=107 Identities=12% Similarity=0.101 Sum_probs=75.3
Q ss_pred CCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhC--CCCeeeecccCCCC---CCCccchheec
Q 046488 320 DIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRG--LVPLYITINQRVPF---FDNTLDLIHTT 394 (480)
Q Consensus 320 ~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rg--lip~~~~~ae~LPF---pd~SFDlV~ss 394 (480)
++++| .+|||+|||+. .+++ +..+...+.++- .+.+..++++.+|+ ++++||+|+|.
T Consensus 9 g~~~g--~~vL~~~~g~v--------------~vD~--s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~ 70 (176)
T 2ld4_A 9 GISAG--QFVAVVWDKSS--------------PVEA--LKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSG 70 (176)
T ss_dssp TCCTT--SEEEEEECTTS--------------CHHH--HHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEEC
T ss_pred CCCCC--CEEEEecCCce--------------eeeC--CHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEEC
Confidence 34555 48999999961 1222 233433333321 35566677888887 89999999999
Q ss_pred ccccCc-cChhcHHHHHHHHHhcccCCcEEEEeeccCCh-------hhHHHHHHHHHHcCc
Q 046488 395 RFLDGW-IDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK-------EDMNDYLEVFKMLKY 447 (480)
Q Consensus 395 ~vL~h~-~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~-------edL~~~~~~l~~lGf 447 (480)
.+++|+ .+. ..++.|++|+|||||+|++.+..... ...+.+.+.++..||
T Consensus 71 ~~l~~~~~~~---~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 71 LVPGSTTLHS---AEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp CSTTCCCCCC---HHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC
T ss_pred ChhhhcccCH---HHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC
Confidence 999888 554 57999999999999999986421110 124678889999999
No 106
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.22 E-value=5.3e-11 Score=119.08 Aligned_cols=136 Identities=15% Similarity=0.103 Sum_probs=87.8
Q ss_pred CeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChhHHHHHHHhCCCCe--e-eecccCCC---CCCCccchheecccccC
Q 046488 327 RIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNEMIALRGLVPL--Y-ITINQRVP---FFDNTLDLIHTTRFLDG 399 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~~~~~iA~rglip~--~-~~~ae~LP---Fpd~SFDlV~ss~vL~h 399 (480)
++|||+|||||.|+..|+++|. .|+++|++. .++.. +.+..... + ...++.++ ++..+||+|++..++++
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~--~mL~~-a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~s 163 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQNGAKLVYAVDVGT--NQLVW-KLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFIS 163 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEECSSS--SCSCH-HHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSC
T ss_pred cEEEecCCCccHHHHHHHhCCCCEEEEEECCH--HHHHH-HHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHhh
Confidence 5899999999999999998875 788888753 23222 22211111 1 11122222 34557999999877764
Q ss_pred ccChhcHHHHHHHHHhcccCCcEEEEe---eccCChh----------------hHHHHHHHHHHcCceeeEEEEeeccCC
Q 046488 400 WIDFVLLDFILYDWDRVLRPGGLLWID---SFFCAKE----------------DMNDYLEVFKMLKYKKHKWVVVPKRDK 460 (480)
Q Consensus 400 ~~d~~~l~~~L~EI~RVLKPGG~fiI~---~f~~~~e----------------dL~~~~~~l~~lGfkkl~W~~~~k~d~ 460 (480)
+ ..+|.|+.|+|||||++++. .|...++ .++.+.+.++..||....+...+-...
T Consensus 164 l------~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi~g~ 237 (291)
T 3hp7_A 164 L------NLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPIQGG 237 (291)
T ss_dssp G------GGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECSSCCG
T ss_pred H------HHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
Confidence 3 24899999999999999886 3432221 124577888999999887776554433
Q ss_pred -CCcceeEEEEEEe
Q 046488 461 -DDREVFFSAVLEK 473 (480)
Q Consensus 461 -~~~E~~lsav~qK 473 (480)
++-|.++ .++|
T Consensus 238 ~gn~e~l~--~~~~ 249 (291)
T 3hp7_A 238 HGNIEFLA--HLEK 249 (291)
T ss_dssp GGCCCEEE--EEEE
T ss_pred CcCHHHHH--Hhhh
Confidence 4556433 3455
No 107
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.22 E-value=1.9e-10 Score=107.04 Aligned_cols=144 Identities=16% Similarity=0.028 Sum_probs=89.2
Q ss_pred CeEEEECCC-CcHHHHHHhhC-CCEEEEEecCCCh--hHHHHHHHhCC-CCeeeeccc-CCCCCCCccchheecccccCc
Q 046488 327 RIGLDFSIG-TGTFAARMREF-NVTLVSAIINLGA--PFNEMIALRGL-VPLYITINQ-RVPFFDNTLDLIHTTRFLDGW 400 (480)
Q Consensus 327 R~VLDVGCG-tG~fAa~Lae~-gV~Vv~vd~d~~~--~~~~~iA~rgl-ip~~~~~ae-~LPFpd~SFDlV~ss~vL~h~ 400 (480)
.+|||+||| +|.++..+++. +..+++++++... .+...+...+. +.+..+++. ..++++++||+|++.-.+.+.
T Consensus 57 ~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~~~~ 136 (230)
T 3evz_A 57 EVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPYYDK 136 (230)
T ss_dssp CEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCCC--
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCCcCC
Confidence 489999999 99999999988 7888888876311 11112222332 344455532 346678999999987554432
Q ss_pred cC----------------hhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEEEEeeccCCCCcc
Q 046488 401 ID----------------FVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKWVVVPKRDKDDRE 464 (480)
Q Consensus 401 ~d----------------~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W~~~~k~d~~~~E 464 (480)
.+ ......++.++.|+|||||++++.... .....+.+.+.++..||......... + ..
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~-~~~~~~~~~~~l~~~g~~~~~~~~~~--g---~~ 210 (230)
T 3evz_A 137 PLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPD-KEKLLNVIKERGIKLGYSVKDIKFKV--G---TR 210 (230)
T ss_dssp -------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEES-CHHHHHHHHHHHHHTTCEEEEEEECC--C---C-
T ss_pred ccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecc-cHhHHHHHHHHHHHcCCceEEEEecC--C---Ce
Confidence 22 011256899999999999999885211 22445667788899998644433321 1 22
Q ss_pred eeEEEEEEeCCC
Q 046488 465 VFFSAVLEKPPR 476 (480)
Q Consensus 465 ~~lsav~qKP~~ 476 (480)
+....+++|+..
T Consensus 211 ~~~~l~f~~~~~ 222 (230)
T 3evz_A 211 WRHSLIFFKGIS 222 (230)
T ss_dssp CEEEEEEECCC-
T ss_pred EEEEEEEecccc
Confidence 333456676543
No 108
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.22 E-value=1.1e-10 Score=118.32 Aligned_cols=123 Identities=15% Similarity=0.165 Sum_probs=88.3
Q ss_pred CCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHH----HHHHhCC---CCeeeecccCCCCCCCccchheeccc
Q 046488 326 IRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNE----MIALRGL---VPLYITINQRVPFFDNTLDLIHTTRF 396 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~----~iA~rgl---ip~~~~~ae~LPFpd~SFDlV~ss~v 396 (480)
..+|||||||+|.++..++++ +..++++|+ ..+.. .+...+. +.+..++.. .|++. .||+|++..+
T Consensus 203 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~v 277 (369)
T 3gwz_A 203 AATAVDIGGGRGSLMAAVLDAFPGLRGTLLER---PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GADVYLIKHV 277 (369)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC---HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEESC
T ss_pred CcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC---HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-CceEEEhhhh
Confidence 468999999999999999886 567777765 12222 2222232 444455544 46666 8999999999
Q ss_pred ccCccChhcHHHHHHHHHhcccCCcEEEEeeccCCh---------------------hhHHHHHHHHHHcCceeeEEEE
Q 046488 397 LDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK---------------------EDMNDYLEVFKMLKYKKHKWVV 454 (480)
Q Consensus 397 L~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~---------------------edL~~~~~~l~~lGfkkl~W~~ 454 (480)
+++|.++.. ..+|.++.|+|||||+++|.++.... ...++|.++++..||+.+....
T Consensus 278 lh~~~d~~~-~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 355 (369)
T 3gwz_A 278 LHDWDDDDV-VRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERSLP 355 (369)
T ss_dssp GGGSCHHHH-HHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEEEE
T ss_pred hccCCHHHH-HHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEEEE
Confidence 999976642 46999999999999999987543322 1134678899999999887543
No 109
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.21 E-value=1.6e-10 Score=129.50 Aligned_cols=95 Identities=14% Similarity=0.088 Sum_probs=75.5
Q ss_pred CeEEEECCCCcHHHHHHhhCC---CEEEEEecCCChhHHHHHHHh-----------CC--CCeeeecccCCCCCCCccch
Q 046488 327 RIGLDFSIGTGTFAARMREFN---VTLVSAIINLGAPFNEMIALR-----------GL--VPLYITINQRVPFFDNTLDL 390 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~g---V~Vv~vd~d~~~~~~~~iA~r-----------gl--ip~~~~~ae~LPFpd~SFDl 390 (480)
.+|||||||+|.++..|++++ ..++++|++. .+ ...|.+ +. +.++.+++..+|+++++||+
T Consensus 723 ~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~--em-Le~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 723 STLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISP--KG-LARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp SEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCH--HH-HHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCH--HH-HHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 489999999999999999986 6899988763 23 223322 22 44566778899999999999
Q ss_pred heecccccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 391 IHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 391 V~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
|++..+++|+.++. ...++.++.|+|||| ++++.
T Consensus 800 VV~~eVLeHL~dp~-l~~~L~eI~RvLKPG-~LIIS 833 (950)
T 3htx_A 800 GTCLEVIEHMEEDQ-ACEFGEKVLSLFHPK-LLIVS 833 (950)
T ss_dssp EEEESCGGGSCHHH-HHHHHHHHHHTTCCS-EEEEE
T ss_pred EEEeCchhhCChHH-HHHHHHHHHHHcCCC-EEEEE
Confidence 99999999988654 256899999999999 76765
No 110
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.21 E-value=4.1e-11 Score=112.68 Aligned_cols=120 Identities=12% Similarity=0.067 Sum_probs=77.5
Q ss_pred CeEEEECCCCcHHHHHHhhC---CCEEEEEecCCC--hhHHHHHHHh-CCCCeeeecccC---CCCCCCccchheecccc
Q 046488 327 RIGLDFSIGTGTFAARMREF---NVTLVSAIINLG--APFNEMIALR-GLVPLYITINQR---VPFFDNTLDLIHTTRFL 397 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~--~~~~~~iA~r-glip~~~~~ae~---LPFpd~SFDlV~ss~vL 397 (480)
.+|||+|||+|.++..|+++ +..+++++++.. ..+. ..+.+ ..+.+..+++.. +|+.+++||+|++...
T Consensus 79 ~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~-~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~- 156 (233)
T 2ipx_A 79 AKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLI-NLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVA- 156 (233)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHH-HHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECCC-
T ss_pred CEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHH-HHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcCC-
Confidence 48999999999999999886 257888776521 1122 23333 334455555444 6777899999998543
Q ss_pred cCccChhcHHHHHHHHHhcccCCcEEEEeeccC------Chhh-HHHHHHHHHHcCceeeEE
Q 046488 398 DGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFC------AKED-MNDYLEVFKMLKYKKHKW 452 (480)
Q Consensus 398 ~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~------~~ed-L~~~~~~l~~lGfkkl~W 452 (480)
.+.....++.++.|+|||||++++..... .... +....+.++..||+.+..
T Consensus 157 ----~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 214 (233)
T 2ipx_A 157 ----QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQ 214 (233)
T ss_dssp ----CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEE
T ss_pred ----CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEE
Confidence 22211446889999999999999853211 1111 112246778889987763
No 111
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.20 E-value=1.1e-10 Score=108.24 Aligned_cols=122 Identities=16% Similarity=0.185 Sum_probs=81.3
Q ss_pred CeEEEECCCCcHHHHHHhhC--CCEEEEEecCCCh--hHHHHHHHhCC--CCeeeecccCCC--CCCCccchheeccccc
Q 046488 327 RIGLDFSIGTGTFAARMREF--NVTLVSAIINLGA--PFNEMIALRGL--VPLYITINQRVP--FFDNTLDLIHTTRFLD 398 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~--~~~~~iA~rgl--ip~~~~~ae~LP--Fpd~SFDlV~ss~vL~ 398 (480)
.+|||+|||+|.++..+++. +..+++++++... .+...+...+. +.++.+++..++ +++++||+|++....
T Consensus 43 ~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~~- 121 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFSD- 121 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESCC-
T ss_pred CeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECCC-
Confidence 48999999999999999886 5788888875311 11122223333 334556666777 889999999987643
Q ss_pred CccChh------cHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeE
Q 046488 399 GWIDFV------LLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHK 451 (480)
Q Consensus 399 h~~d~~------~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~ 451 (480)
+|.... ....++.++.|+|||||.+++..- .....+...+.++..||....
T Consensus 122 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~--~~~~~~~~~~~~~~~g~~~~~ 178 (214)
T 1yzh_A 122 PWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD--NRGLFEYSLVSFSQYGMKLNG 178 (214)
T ss_dssp CCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES--CHHHHHHHHHHHHHHTCEEEE
T ss_pred CccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC--CHHHHHHHHHHHHHCCCeeee
Confidence 332210 114699999999999999988531 112234456677788887543
No 112
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.20 E-value=1.1e-10 Score=115.48 Aligned_cols=124 Identities=10% Similarity=-0.009 Sum_probs=87.1
Q ss_pred CeEEEECCCCcHHHHHHhhC--CCEEEEEecC-CChhHHHHHHHh---CCCCeeeecccCCCCCCCccchheecccccCc
Q 046488 327 RIGLDFSIGTGTFAARMREF--NVTLVSAIIN-LGAPFNEMIALR---GLVPLYITINQRVPFFDNTLDLIHTTRFLDGW 400 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d-~~~~~~~~iA~r---glip~~~~~ae~LPFpd~SFDlV~ss~vL~h~ 400 (480)
.+|||+|||+|.++..++++ +..++++|+. ....+...+... ..+.+..++... |++ ++||+|++..++++|
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~~~ 246 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIGDL 246 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESCGGGC
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchhccCC
Confidence 68999999999999999876 5677777761 122222222222 234555555444 555 689999999999999
Q ss_pred cChhcHHHHHHHHHhcccCCcEEEEeeccCCh----------------------hhHHHHHHHHHHcCceeeEEE
Q 046488 401 IDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK----------------------EDMNDYLEVFKMLKYKKHKWV 453 (480)
Q Consensus 401 ~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~----------------------edL~~~~~~l~~lGfkkl~W~ 453 (480)
.+... ..++.++.|+|||||++++.+..... ...++|.+++++.||+.+...
T Consensus 247 ~~~~~-~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 320 (334)
T 2ip2_A 247 DEAAS-LRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIV 320 (334)
T ss_dssp CHHHH-HHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred CHHHH-HHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEE
Confidence 76542 57999999999999999987543211 013457889999999977643
No 113
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.20 E-value=2.5e-11 Score=114.23 Aligned_cols=97 Identities=9% Similarity=0.031 Sum_probs=64.4
Q ss_pred CCCCCCCCeEEEECCCCcHHHHHHhhCC--CEEEEEecCCChhHH---HHHHHhC-CCCeeeecccC----CCCCCCccc
Q 046488 320 DIKPGEIRIGLDFSIGTGTFAARMREFN--VTLVSAIINLGAPFN---EMIALRG-LVPLYITINQR----VPFFDNTLD 389 (480)
Q Consensus 320 ~l~~g~iR~VLDVGCGtG~fAa~Lae~g--V~Vv~vd~d~~~~~~---~~iA~rg-lip~~~~~ae~----LPFpd~SFD 389 (480)
.+.++ .+|||+|||+|.++..+++.. ..++++|++. .+. ...+.+. .+....+++.. .|+. ++||
T Consensus 54 ~~~~g--~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~--~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~-~~fD 128 (210)
T 1nt2_A 54 KLRGD--ERVLYLGAASGTTVSHLADIVDEGIIYAVEYSA--KPFEKLLELVRERNNIIPLLFDASKPWKYSGIV-EKVD 128 (210)
T ss_dssp CCCSS--CEEEEETCTTSHHHHHHHHHTTTSEEEEECCCH--HHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTC-CCEE
T ss_pred CCCCC--CEEEEECCcCCHHHHHHHHHcCCCEEEEEECCH--HHHHHHHHHHhcCCCeEEEEcCCCCchhhcccc-ccee
Confidence 34444 489999999999999998762 5788887652 321 2233332 23333444443 3554 8999
Q ss_pred hheecccccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 390 LIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 390 lV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
+|++.. .. +.....++.|+.|+|||||+|++.
T Consensus 129 ~V~~~~-~~----~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 129 LIYQDI-AQ----KNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp EEEECC-CS----TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEec-cC----hhHHHHHHHHHHHHhCCCCEEEEE
Confidence 999862 21 222245699999999999999987
No 114
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.20 E-value=1.7e-10 Score=108.58 Aligned_cols=117 Identities=9% Similarity=0.064 Sum_probs=77.1
Q ss_pred CeEEEECCCCcHHHHHHhhC-C-CEEEEEecCCChhHHHHHHHh----CCCCeeeecccC----CCCCCCccchheeccc
Q 046488 327 RIGLDFSIGTGTFAARMREF-N-VTLVSAIINLGAPFNEMIALR----GLVPLYITINQR----VPFFDNTLDLIHTTRF 396 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~-g-V~Vv~vd~d~~~~~~~~iA~r----glip~~~~~ae~----LPFpd~SFDlV~ss~v 396 (480)
.+|||+|||+|.++..|++. + ..+++++++. .+...+... ..+....+++.. +++. ++||+|+
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~---- 148 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIADKGIVYAIEYAP--RIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIY---- 148 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTTTSEEEEEESCH--HHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEE----
T ss_pred CEEEEEcccCCHHHHHHHHHcCCcEEEEEECCH--HHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEE----
Confidence 48999999999999999987 3 6788887652 333322111 123344555665 7776 8999998
Q ss_pred ccCccChhcHHHHHHHHHhcccCCcEEEEeeccCC--h-----hh-H-HHHHHHHHHcCceeeEEE
Q 046488 397 LDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCA--K-----ED-M-NDYLEVFKMLKYKKHKWV 453 (480)
Q Consensus 397 L~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~--~-----ed-L-~~~~~~l~~lGfkkl~W~ 453 (480)
+++.++.....++.++.|+|||||++++. +... . .. . +.+. .++..||+.+...
T Consensus 149 -~~~~~~~~~~~~l~~~~~~LkpgG~l~i~-~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~ 211 (230)
T 1fbn_A 149 -EDVAQPNQAEILIKNAKWFLKKGGYGMIA-IKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEV 211 (230)
T ss_dssp -ECCCSTTHHHHHHHHHHHHEEEEEEEEEE-EEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEE
T ss_pred -EecCChhHHHHHHHHHHHhCCCCcEEEEE-EecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEE
Confidence 23344433356799999999999999986 3211 1 11 1 3344 7788899876544
No 115
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.19 E-value=8.8e-11 Score=112.79 Aligned_cols=132 Identities=15% Similarity=0.131 Sum_probs=82.0
Q ss_pred CeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChhHHHHHHHhCCCCee--------eecccCC---CCCCCccchheec
Q 046488 327 RIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNEMIALRGLVPLY--------ITINQRV---PFFDNTLDLIHTT 394 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~~~~~iA~rglip~~--------~~~ae~L---PFpd~SFDlV~ss 394 (480)
.+|||||||||.++..|+++|. .++++|++.. +... |.+...... ....+.+ ++.+.+||+++++
T Consensus 39 ~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~--ml~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~ 115 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTN--QLAW-KIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFIS 115 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEECSSCC--CCCH-HHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSC
T ss_pred CEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHH--HHHH-HHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhh
Confidence 5899999999999999999875 8888887642 2222 222211110 0011222 2455677777654
Q ss_pred ccccCccChhcHHHHHHHHHhcccCCcEEEEe---eccCCh----------------hhHHHHHHHHHHcCceeeEEEEe
Q 046488 395 RFLDGWIDFVLLDFILYDWDRVLRPGGLLWID---SFFCAK----------------EDMNDYLEVFKMLKYKKHKWVVV 455 (480)
Q Consensus 395 ~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~---~f~~~~----------------edL~~~~~~l~~lGfkkl~W~~~ 455 (480)
. ..++.|+.|+|||||+|++. .|.... ...+++.++++..||+...+...
T Consensus 116 l-----------~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~ 184 (232)
T 3opn_A 116 L-----------DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFS 184 (232)
T ss_dssp G-----------GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEEC
T ss_pred H-----------HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEc
Confidence 2 24899999999999999886 121111 12345778999999998877665
Q ss_pred eccCC-CCcceeEEEEEEeC
Q 046488 456 PKRDK-DDREVFFSAVLEKP 474 (480)
Q Consensus 456 ~k~d~-~~~E~~lsav~qKP 474 (480)
.-... ++-|.++ .++|.
T Consensus 185 pi~g~~gn~e~l~--~~~~~ 202 (232)
T 3opn_A 185 PIKGGAGNVEFLV--HLLKD 202 (232)
T ss_dssp SSCBTTTBCCEEE--EEEES
T ss_pred cCCCCCCCHHHHH--HHhhc
Confidence 44322 3344332 35664
No 116
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.18 E-value=3.8e-11 Score=121.37 Aligned_cols=100 Identities=18% Similarity=0.214 Sum_probs=73.2
Q ss_pred CeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChhHHHH-HHHhCC---CCeeeecccCCCCCCCccchheecccccCcc
Q 046488 327 RIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNEM-IALRGL---VPLYITINQRVPFFDNTLDLIHTTRFLDGWI 401 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~~~~~-iA~rgl---ip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~ 401 (480)
.+|||||||+|.++..+++.|. .+++++++.......+ +...+. +.+..+..+.+++++++||+|++..+..++.
T Consensus 68 ~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~~l~ 147 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLF 147 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBBTBT
T ss_pred CEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccccccc
Confidence 4899999999999999999865 8899887621111122 222332 4456677888999999999999966544443
Q ss_pred ChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 402 DFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 402 d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
....+..++.++.|+|||||+++..
T Consensus 148 ~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 148 YESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp BTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred CchhHHHHHHHHHHhCCCCCEEccc
Confidence 3333467999999999999998754
No 117
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.18 E-value=5.5e-11 Score=120.65 Aligned_cols=122 Identities=12% Similarity=0.022 Sum_probs=86.6
Q ss_pred CCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCCCCccchheecccccCccCh
Q 046488 326 IRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFDNTLDLIHTTRFLDGWIDF 403 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d~ 403 (480)
..+|||||||+|.++..++++ +..++++|+ ..+.........+.+..++... |++++ |+|++.+++|+|.+.
T Consensus 202 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d~ 275 (364)
T 3p9c_A 202 LGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL---PHVISEAPQFPGVTHVGGDMFK-EVPSG--DTILMKWILHDWSDQ 275 (364)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC---HHHHTTCCCCTTEEEEECCTTT-CCCCC--SEEEEESCGGGSCHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC---HHHHHhhhhcCCeEEEeCCcCC-CCCCC--CEEEehHHhccCCHH
Confidence 468999999999999999875 567777664 2222211111234455566555 77765 999999999999765
Q ss_pred hcHHHHHHHHHhcccCCcEEEEeeccCChh---------------------------hHHHHHHHHHHcCceeeEEEE
Q 046488 404 VLLDFILYDWDRVLRPGGLLWIDSFFCAKE---------------------------DMNDYLEVFKMLKYKKHKWVV 454 (480)
Q Consensus 404 ~~l~~~L~EI~RVLKPGG~fiI~~f~~~~e---------------------------dL~~~~~~l~~lGfkkl~W~~ 454 (480)
.. ..+|++++|+|||||+++|.++..... ..++|.+++++.||+.+....
T Consensus 276 ~~-~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~ 352 (364)
T 3p9c_A 276 HC-ATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKSTY 352 (364)
T ss_dssp HH-HHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEEEEE
T ss_pred HH-HHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceEEEEE
Confidence 42 679999999999999999875432110 023577899999999887544
No 118
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.18 E-value=1.3e-10 Score=112.41 Aligned_cols=121 Identities=12% Similarity=-0.008 Sum_probs=83.8
Q ss_pred CCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChh--HHHHHHHhCC--CCeeeecccCCCCC---CCccchheeccc
Q 046488 326 IRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAP--FNEMIALRGL--VPLYITINQRVPFF---DNTLDLIHTTRF 396 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~--~~~~iA~rgl--ip~~~~~ae~LPFp---d~SFDlV~ss~v 396 (480)
..+|||||||+|..+..|+.. +..+++++++...- +...+...+. +.++.+.++.++.. +++||+|++..+
T Consensus 81 ~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a~ 160 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARAV 160 (249)
T ss_dssp SCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEESS
T ss_pred CCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEECCc
Confidence 358999999999999998875 67888888653111 1122223343 34555667777653 589999998543
Q ss_pred ccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEEE
Q 046488 397 LDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKWV 453 (480)
Q Consensus 397 L~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W~ 453 (480)
. + +..++.++.|+|||||+|++..-....+++..+...++.+||+.....
T Consensus 161 -~---~---~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~ 210 (249)
T 3g89_A 161 -A---P---LCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVL 210 (249)
T ss_dssp -C---C---HHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEE
T ss_pred -C---C---HHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEE
Confidence 2 2 246899999999999998875433345666677788889999866533
No 119
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.17 E-value=3.6e-11 Score=118.07 Aligned_cols=99 Identities=15% Similarity=0.031 Sum_probs=71.7
Q ss_pred CeEEEECCCCcHHHHHHhhC-CCEEEEEecCCChhHHHHHH----Hh-------C--CCCeeeecccCCC----CC--CC
Q 046488 327 RIGLDFSIGTGTFAARMREF-NVTLVSAIINLGAPFNEMIA----LR-------G--LVPLYITINQRVP----FF--DN 386 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~-gV~Vv~vd~d~~~~~~~~iA----~r-------g--lip~~~~~ae~LP----Fp--d~ 386 (480)
.+|||+|||+|.++..+++. +..++++|++. .+..... .. + .+.+..++++.++ ++ ++
T Consensus 36 ~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~--~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 36 ITVLDLGCGKGGDLLKWKKGRINKLVCTDIAD--VSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp CEEEEETCTTTTTHHHHHHTTCSEEEEEESCH--HHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CEEEEECCCCcHHHHHHHhcCCCEEEEEeCCH--HHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 48999999999999999876 56788888652 3322221 11 1 2344556666665 64 55
Q ss_pred ccchheecccccCc-cChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 387 TLDLIHTTRFLDGW-IDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 387 SFDlV~ss~vL~h~-~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
+||+|+|..++++. .+......++.++.|+|||||+|++..
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 99999999988765 444444679999999999999999874
No 120
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.17 E-value=3.2e-10 Score=106.84 Aligned_cols=120 Identities=12% Similarity=0.056 Sum_probs=84.3
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhC---CCEEEEEecCCChhHHH----HHHHh-C--CCCeeeecccCCCCCCC
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREF---NVTLVSAIINLGAPFNE----MIALR-G--LVPLYITINQRVPFFDN 386 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~~~~~----~iA~r-g--lip~~~~~ae~LPFpd~ 386 (480)
..+.+.++. +|||+|||+|.++..+++. +..+++++++. .+.. .+... + .+.+..++...+|++++
T Consensus 90 ~~~~~~~~~--~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~--~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~ 165 (258)
T 2pwy_A 90 TLLDLAPGM--RVLEAGTGSGGLTLFLARAVGEKGLVESYEARP--HHLAQAERNVRAFWQVENVRFHLGKLEEAELEEA 165 (258)
T ss_dssp HHTTCCTTC--EEEEECCTTSHHHHHHHHHHCTTSEEEEEESCH--HHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTT
T ss_pred HHcCCCCCC--EEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCH--HHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCC
Confidence 445555554 8999999999999999987 57888888652 2222 22222 3 23445566667788889
Q ss_pred ccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceee
Q 046488 387 TLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKH 450 (480)
Q Consensus 387 SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl 450 (480)
+||+|++ ++.+. ..++.++.|+|||||++++... ..+.+..+.+.++..||..+
T Consensus 166 ~~D~v~~-----~~~~~---~~~l~~~~~~L~~gG~l~~~~~--~~~~~~~~~~~l~~~gf~~~ 219 (258)
T 2pwy_A 166 AYDGVAL-----DLMEP---WKVLEKAALALKPDRFLVAYLP--NITQVLELVRAAEAHPFRLE 219 (258)
T ss_dssp CEEEEEE-----ESSCG---GGGHHHHHHHEEEEEEEEEEES--CHHHHHHHHHHHTTTTEEEE
T ss_pred CcCEEEE-----CCcCH---HHHHHHHHHhCCCCCEEEEEeC--CHHHHHHHHHHHHHCCCceE
Confidence 9999997 23444 2489999999999999988642 23455666777788898753
No 121
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.17 E-value=9.3e-11 Score=108.51 Aligned_cols=122 Identities=16% Similarity=0.105 Sum_probs=82.0
Q ss_pred CeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHHHH---HH-----hC--CCCeeeecccCCCCCCCccchheec
Q 046488 327 RIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNEMI---AL-----RG--LVPLYITINQRVPFFDNTLDLIHTT 394 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~i---A~-----rg--lip~~~~~ae~LPFpd~SFDlV~ss 394 (480)
.+|||+|||+|.++..|+++ +..+++++++. .+...+ +. .+ .+.+..++++.+|+++++ |.|...
T Consensus 29 ~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~--~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~ 105 (218)
T 3mq2_A 29 DVVLDVGTGDGKHPYKVARQNPSRLVVALDADK--SRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVL 105 (218)
T ss_dssp EEEEEESCTTCHHHHHHHHHCTTEEEEEEESCG--GGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEE
T ss_pred CEEEEecCCCCHHHHHHHHHCCCCEEEEEECCH--HHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEE
Confidence 48999999999999999987 67888888763 333322 21 12 234456778889998887 877732
Q ss_pred c---ccc--CccChhcHHHHHHHHHhcccCCcEEEEee----ccCCh-----------hhH-HHHHHHHHHcCceeeEEE
Q 046488 395 R---FLD--GWIDFVLLDFILYDWDRVLRPGGLLWIDS----FFCAK-----------EDM-NDYLEVFKMLKYKKHKWV 453 (480)
Q Consensus 395 ~---vL~--h~~d~~~l~~~L~EI~RVLKPGG~fiI~~----f~~~~-----------edL-~~~~~~l~~lGfkkl~W~ 453 (480)
. .++ |+.++ ..++.++.|+|||||++++.. |.... +.. +.+.+.++..||+...-.
T Consensus 106 ~~~~~~~~~~~~~~---~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~~ 182 (218)
T 3mq2_A 106 MPWGSLLRGVLGSS---PEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADCR 182 (218)
T ss_dssp SCCHHHHHHHHTSS---SHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred ccchhhhhhhhccH---HHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCceeee
Confidence 2 111 33343 359999999999999999852 22111 112 337788999999866544
Q ss_pred E
Q 046488 454 V 454 (480)
Q Consensus 454 ~ 454 (480)
.
T Consensus 183 ~ 183 (218)
T 3mq2_A 183 Y 183 (218)
T ss_dssp E
T ss_pred c
Confidence 3
No 122
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.17 E-value=2.4e-11 Score=122.91 Aligned_cols=121 Identities=15% Similarity=0.075 Sum_probs=84.8
Q ss_pred CCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHHHHHHh-CCCCeeeecccCCCCCCCccchheecccccCccC
Q 046488 326 IRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNEMIALR-GLVPLYITINQRVPFFDNTLDLIHTTRFLDGWID 402 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA~r-glip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d 402 (480)
..+|||||||+|.++..++++ ++.++++|+ ..+.. .+.+ ..+.+..++... |+++ ||+|++..+++||.+
T Consensus 210 ~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~---~~~~~-~a~~~~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~d 282 (372)
T 1fp1_D 210 ISTLVDVGGGSGRNLELIISKYPLIKGINFDL---PQVIE-NAPPLSGIEHVGGDMFA-SVPQ--GDAMILKAVCHNWSD 282 (372)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC---HHHHT-TCCCCTTEEEEECCTTT-CCCC--EEEEEEESSGGGSCH
T ss_pred CCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh---HHHHH-hhhhcCCCEEEeCCccc-CCCC--CCEEEEecccccCCH
Confidence 358999999999999999986 466666664 22322 2211 224445555544 6655 999999999999987
Q ss_pred hhcHHHHHHHHHhcccCCcEEEEeeccCCh--------------------------hhHHHHHHHHHHcCceeeEEEE
Q 046488 403 FVLLDFILYDWDRVLRPGGLLWIDSFFCAK--------------------------EDMNDYLEVFKMLKYKKHKWVV 454 (480)
Q Consensus 403 ~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~--------------------------edL~~~~~~l~~lGfkkl~W~~ 454 (480)
+.. ..+|.++.|+|||||+++|.++.... ...++|.++++..||+.+.+..
T Consensus 283 ~~~-~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 359 (372)
T 1fp1_D 283 EKC-IEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVAC 359 (372)
T ss_dssp HHH-HHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEEEEE
T ss_pred HHH-HHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCceEEEEE
Confidence 642 47999999999999999987432110 0124577889999998876543
No 123
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.16 E-value=1.7e-10 Score=104.41 Aligned_cols=142 Identities=15% Similarity=0.133 Sum_probs=82.9
Q ss_pred CCCCCCCeEEEECCCCcHHHHHHhhC-C----------CEEEEEecCCChhHHHHHHHhCCCCee-eecccCCC------
Q 046488 321 IKPGEIRIGLDFSIGTGTFAARMREF-N----------VTLVSAIINLGAPFNEMIALRGLVPLY-ITINQRVP------ 382 (480)
Q Consensus 321 l~~g~iR~VLDVGCGtG~fAa~Lae~-g----------V~Vv~vd~d~~~~~~~~iA~rglip~~-~~~ae~LP------ 382 (480)
+.++ .+|||+|||+|.++..++++ + ..+++++++.... ...+... .++....+
T Consensus 20 ~~~~--~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-------~~~~~~~~~~d~~~~~~~~~~~ 90 (196)
T 2nyu_A 20 LRPG--LRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-------LEGATFLCPADVTDPRTSQRIL 90 (196)
T ss_dssp CCTT--CEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-------CTTCEEECSCCTTSHHHHHHHH
T ss_pred CCCC--CEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhccc-------CCCCeEEEeccCCCHHHHHHHH
Confidence 3444 48999999999999999886 4 6788888764211 0122333 33332222
Q ss_pred --CCCCccchheecccccC---c-cChh----cHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEE
Q 046488 383 --FFDNTLDLIHTTRFLDG---W-IDFV----LLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKW 452 (480)
Q Consensus 383 --Fpd~SFDlV~ss~vL~h---~-~d~~----~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W 452 (480)
+++++||+|+|..+++. + .+.. ....++.++.|+|||||+|++..+... +...+...+... |..+.+
T Consensus 91 ~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~--~~~~~~~~l~~~-f~~v~~ 167 (196)
T 2nyu_A 91 EVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGS--QSRRLQRRLTEE-FQNVRI 167 (196)
T ss_dssp HHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSG--GGHHHHHHHHHH-EEEEEE
T ss_pred HhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCc--cHHHHHHHHHHH-hcceEE
Confidence 45679999998654432 2 1211 013689999999999999999766543 333444444442 666654
Q ss_pred EEeeccCCCCcceeEEEEEEeC
Q 046488 453 VVVPKRDKDDREVFFSAVLEKP 474 (480)
Q Consensus 453 ~~~~k~d~~~~E~~lsav~qKP 474 (480)
...........|.|+.+...|-
T Consensus 168 ~~~~~~~~~~~e~~~v~~g~~~ 189 (196)
T 2nyu_A 168 IKPEASRKESSEVYFLATQYHG 189 (196)
T ss_dssp ECCC--------EEEEEEEECC
T ss_pred ECCcccCccCceEEEEeeecCC
Confidence 3321111234688877665553
No 124
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.15 E-value=1.5e-10 Score=111.64 Aligned_cols=117 Identities=12% Similarity=0.098 Sum_probs=82.0
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChh--HHHHHHHhCC-CCeeeecccCCCCCCCccchheecccccCccCh
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAP--FNEMIALRGL-VPLYITINQRVPFFDNTLDLIHTTRFLDGWIDF 403 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~--~~~~iA~rgl-ip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d~ 403 (480)
.+|||+|||+|.++..+++.|..+++++++.... +...+...+. +.+..+.... ++++++||+|+++...++
T Consensus 122 ~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~-~~~~~~fD~Vv~n~~~~~---- 196 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA-ALPFGPFDLLVANLYAEL---- 196 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH-HGGGCCEEEEEEECCHHH----
T ss_pred CEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhh-cCcCCCCCEEEECCcHHH----
Confidence 4899999999999999999888888888764221 1122222232 3344444332 255789999998654322
Q ss_pred hcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEE
Q 046488 404 VLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKW 452 (480)
Q Consensus 404 ~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W 452 (480)
+..++.++.|+|||||+++++.+.. .+.+.+.+.+++.||+....
T Consensus 197 --~~~~l~~~~~~LkpgG~lils~~~~--~~~~~v~~~l~~~Gf~~~~~ 241 (254)
T 2nxc_A 197 --HAALAPRYREALVPGGRALLTGILK--DRAPLVREAMAGAGFRPLEE 241 (254)
T ss_dssp --HHHHHHHHHHHEEEEEEEEEEEEEG--GGHHHHHHHHHHTTCEEEEE
T ss_pred --HHHHHHHHHHHcCCCCEEEEEeecc--CCHHHHHHHHHHCCCEEEEE
Confidence 2568999999999999999976553 34566778889999987654
No 125
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.14 E-value=8.4e-11 Score=117.85 Aligned_cols=122 Identities=16% Similarity=0.084 Sum_probs=84.7
Q ss_pred CCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCCCCccchheecccccCccCh
Q 046488 326 IRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFDNTLDLIHTTRFLDGWIDF 403 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d~ 403 (480)
..+|||||||+|.++..++++ +..++++|+ ..+.........+.+..++... ++++ ||+|++..+++||.+.
T Consensus 189 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~---~~~~~~a~~~~~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~d~ 262 (352)
T 1fp2_A 189 LESIVDVGGGTGTTAKIICETFPKLKCIVFDR---PQVVENLSGSNNLTYVGGDMFT-SIPN--ADAVLLKYILHNWTDK 262 (352)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC---HHHHTTCCCBTTEEEEECCTTT-CCCC--CSEEEEESCGGGSCHH
T ss_pred CceEEEeCCCccHHHHHHHHHCCCCeEEEeeC---HHHHhhcccCCCcEEEeccccC-CCCC--ccEEEeehhhccCCHH
Confidence 358999999999999999876 567777774 2232211111224444555433 5553 9999999999999765
Q ss_pred hcHHHHHHHHHhcccC---CcEEEEeeccCCh-------------------------hhHHHHHHHHHHcCceeeEEEE
Q 046488 404 VLLDFILYDWDRVLRP---GGLLWIDSFFCAK-------------------------EDMNDYLEVFKMLKYKKHKWVV 454 (480)
Q Consensus 404 ~~l~~~L~EI~RVLKP---GG~fiI~~f~~~~-------------------------edL~~~~~~l~~lGfkkl~W~~ 454 (480)
.. ..+|+++.|+||| ||+++|.++.... ...++|.++++..||+.+....
T Consensus 263 ~~-~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 340 (352)
T 1fp2_A 263 DC-LRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYKISP 340 (352)
T ss_dssp HH-HHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEEEEEE
T ss_pred HH-HHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCeeEEEe
Confidence 42 4799999999999 9999987543211 0124677899999998776443
No 126
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.14 E-value=1.7e-10 Score=108.10 Aligned_cols=119 Identities=13% Similarity=0.137 Sum_probs=78.0
Q ss_pred CeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHH----HHHHhCC--CCeeeecccCCC--CCCCccchheeccc
Q 046488 327 RIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNE----MIALRGL--VPLYITINQRVP--FFDNTLDLIHTTRF 396 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~----~iA~rgl--ip~~~~~ae~LP--Fpd~SFDlV~ss~v 396 (480)
.+|||||||+|.++..|++. +..+++++++. .+.. .+...+. +.++.+++..++ +++++||.|++.+.
T Consensus 40 ~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~--~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQNPDINYIGIELFK--SVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHHCTTSEEEEECSCH--HHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred ceEEEEecCCCHHHHHHHHHCCCCCEEEEEech--HHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 47999999999999999986 67888888653 3322 2222333 334456666676 78999999987543
Q ss_pred ccCccChh------cHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceee
Q 046488 397 LDGWIDFV------LLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKH 450 (480)
Q Consensus 397 L~h~~d~~------~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl 450 (480)
. +|.... ....++.++.|+|||||.|++..- .....+...+.++..||...
T Consensus 118 ~-p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td--~~~~~~~~~~~~~~~g~~~~ 174 (213)
T 2fca_A 118 D-PWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD--NRGLFEYSLKSFSEYGLLLT 174 (213)
T ss_dssp C-CCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES--CHHHHHHHHHHHHHHTCEEE
T ss_pred C-CCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC--CHHHHHHHHHHHHHCCCccc
Confidence 2 332210 014689999999999999988531 11112344566677787643
No 127
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.14 E-value=9.6e-11 Score=118.13 Aligned_cols=99 Identities=18% Similarity=0.165 Sum_probs=70.1
Q ss_pred CeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChh-HHHHHHHhC---CCCeeeecccCCCCCCCccchheecccccCcc
Q 046488 327 RIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAP-FNEMIALRG---LVPLYITINQRVPFFDNTLDLIHTTRFLDGWI 401 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~-~~~~iA~rg---lip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~ 401 (480)
.+|||||||+|.++..+++.|. .+++++++.... +...+...+ .+.+..++++.+++++++||+|++..+...+.
T Consensus 66 ~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~ 145 (340)
T 2fyt_A 66 KVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGYFLL 145 (340)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBTTBT
T ss_pred CEEEEeeccCcHHHHHHHHcCCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchhhcc
Confidence 4899999999999999998875 788888762111 111222223 24455677888999999999999866322222
Q ss_pred ChhcHHHHHHHHHhcccCCcEEEE
Q 046488 402 DFVLLDFILYDWDRVLRPGGLLWI 425 (480)
Q Consensus 402 d~~~l~~~L~EI~RVLKPGG~fiI 425 (480)
....+..++.++.|+|||||+++.
T Consensus 146 ~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 146 FESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp TTCHHHHHHHHHHHHEEEEEEEES
T ss_pred CHHHHHHHHHHHHhhcCCCcEEEc
Confidence 222336799999999999999873
No 128
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.14 E-value=4.6e-10 Score=99.29 Aligned_cols=118 Identities=9% Similarity=0.051 Sum_probs=82.5
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHH----HHHHhCC--CCeeeecccCCCCCCCccch
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNE----MIALRGL--VPLYITINQRVPFFDNTLDL 390 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~----~iA~rgl--ip~~~~~ae~LPFpd~SFDl 390 (480)
+.+.+.++ .+|||+|||+|.++..+++.+..+++++++. .+.. .+...+. +.+..++... ++++++||+
T Consensus 29 ~~~~~~~~--~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~--~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~ 103 (183)
T 2yxd_A 29 GKLNLNKD--DVVVDVGCGSGGMTVEIAKRCKFVYAIDYLD--GAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKLEFNK 103 (183)
T ss_dssp HHHCCCTT--CEEEEESCCCSHHHHHHHTTSSEEEEEECSH--HHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGCCCSE
T ss_pred HHcCCCCC--CEEEEeCCCCCHHHHHHHhcCCeEEEEeCCH--HHHHHHHHHHHHcCCCcEEEEECCccc-cccCCCCcE
Confidence 44455444 4899999999999999998777888888762 2222 2222232 3344455444 677789999
Q ss_pred heecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceee
Q 046488 391 IHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKH 450 (480)
Q Consensus 391 V~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl 450 (480)
|++..+ .+ ...++.++.|+ |||++++... ..+....+.+.++..||.-.
T Consensus 104 i~~~~~----~~---~~~~l~~~~~~--~gG~l~~~~~--~~~~~~~~~~~l~~~g~~~~ 152 (183)
T 2yxd_A 104 AFIGGT----KN---IEKIIEILDKK--KINHIVANTI--VLENAAKIINEFESRGYNVD 152 (183)
T ss_dssp EEECSC----SC---HHHHHHHHHHT--TCCEEEEEES--CHHHHHHHHHHHHHTTCEEE
T ss_pred EEECCc----cc---HHHHHHHHhhC--CCCEEEEEec--ccccHHHHHHHHHHcCCeEE
Confidence 999876 22 25689999999 9999998753 34456667888899997533
No 129
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.12 E-value=5.4e-10 Score=112.94 Aligned_cols=121 Identities=15% Similarity=0.188 Sum_probs=84.4
Q ss_pred CCCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHHHHHHh-------CCCCeeeecccCCCCCCCccchheecc
Q 046488 325 EIRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNEMIALR-------GLVPLYITINQRVPFFDNTLDLIHTTR 395 (480)
Q Consensus 325 ~iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA~r-------glip~~~~~ae~LPFpd~SFDlV~ss~ 395 (480)
..++|||||||+|.++..++++ ++.++..+. +.. ...|.+ ..+.++.++....|++ .+|++++.+
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl---p~v-~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~ 252 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI---PEV-VWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILAR 252 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC---HHH-HHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEES
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC---HHH-HHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeee
Confidence 3468999999999999999987 455555543 222 222222 1234444554334444 479999999
Q ss_pred cccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChh-----------------------hHHHHHHHHHHcCceeeEE
Q 046488 396 FLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKE-----------------------DMNDYLEVFKMLKYKKHKW 452 (480)
Q Consensus 396 vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~e-----------------------dL~~~~~~l~~lGfkkl~W 452 (480)
+||+|.++.. ..+|++++++|+|||+++|.+..-..+ ..++|.+++++.||+.++.
T Consensus 253 vlh~~~d~~~-~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~v 331 (353)
T 4a6d_A 253 VLHDWADGKC-SHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQF 331 (353)
T ss_dssp SGGGSCHHHH-HHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEEE
T ss_pred ecccCCHHHH-HHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEEE
Confidence 9999987653 568999999999999999875432110 1246888999999998864
No 130
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.12 E-value=8.7e-11 Score=112.10 Aligned_cols=90 Identities=21% Similarity=0.288 Sum_probs=69.0
Q ss_pred CeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHHHHHHhC-CCCeeeecccCCCCCCCccchheecccccCccCh
Q 046488 327 RIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNEMIALRG-LVPLYITINQRVPFFDNTLDLIHTTRFLDGWIDF 403 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA~rg-lip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d~ 403 (480)
.+|||+|||+|.++..+++. +..+++++++ ..+......+. .+.+..++.+.+|+++++||+|++..+.
T Consensus 87 ~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s--~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~------ 158 (269)
T 1p91_A 87 TAVLDIGCGEGYYTHAFADALPEITTFGLDVS--KVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP------ 158 (269)
T ss_dssp CEEEEETCTTSTTHHHHHHTCTTSEEEEEESC--HHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC------
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCeEEEEeCC--HHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh------
Confidence 48999999999999999987 7788888865 23333333332 2445566778899999999999986541
Q ss_pred hcHHHHHHHHHhcccCCcEEEEeec
Q 046488 404 VLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 404 ~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
.++.|+.|+|||||++++...
T Consensus 159 ----~~l~~~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 159 ----CKAEELARVVKPGGWVITATP 179 (269)
T ss_dssp ----CCHHHHHHHEEEEEEEEEEEE
T ss_pred ----hhHHHHHHhcCCCcEEEEEEc
Confidence 158999999999999988743
No 131
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.12 E-value=1.4e-10 Score=118.34 Aligned_cols=99 Identities=16% Similarity=0.205 Sum_probs=72.5
Q ss_pred CeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChhHHHH-HHHhCC---CCeeeecccCCCCCCCccchheecccccCcc
Q 046488 327 RIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNEM-IALRGL---VPLYITINQRVPFFDNTLDLIHTTRFLDGWI 401 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~~~~~-iA~rgl---ip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~ 401 (480)
.+|||||||+|.++..++++|. .+++++++.......+ +...+. +.++.++++.++++ ++||+|++..+.+...
T Consensus 65 ~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~~~l~ 143 (376)
T 3r0q_C 65 KTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMGYFLL 143 (376)
T ss_dssp CEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCBTTBT
T ss_pred CEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChhhccc
Confidence 5899999999999999999877 8899987621122222 233332 34556778888877 8999999965444443
Q ss_pred ChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 402 DFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 402 d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
....+..++.+++|+|||||++++.
T Consensus 144 ~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 144 RESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp TTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred chHHHHHHHHHHHhhCCCCeEEEEe
Confidence 3333467999999999999999875
No 132
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.12 E-value=1.1e-10 Score=117.33 Aligned_cols=100 Identities=9% Similarity=0.064 Sum_probs=69.4
Q ss_pred hcCCCCCCCCeEEEECCCCcHHHHH-Hhh-CCCEEEEEecCCCh--hHHHHHHHhCC--CCeeeecccCCCCCCCccchh
Q 046488 318 VLDIKPGEIRIGLDFSIGTGTFAAR-MRE-FNVTLVSAIINLGA--PFNEMIALRGL--VPLYITINQRVPFFDNTLDLI 391 (480)
Q Consensus 318 vL~l~~g~iR~VLDVGCGtG~fAa~-Lae-~gV~Vv~vd~d~~~--~~~~~iA~rgl--ip~~~~~ae~LPFpd~SFDlV 391 (480)
++.++++. +|||||||+|.+++. +++ .|..|++++++... .+...+++.+. +.+..+++..+| +++||+|
T Consensus 117 la~l~~g~--rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV 192 (298)
T 3fpf_A 117 LGRFRRGE--RAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVL 192 (298)
T ss_dssp HTTCCTTC--EEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEE
T ss_pred HcCCCCcC--EEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEE
Confidence 56677765 899999999987654 454 38889998876311 11222233343 344556666665 8999999
Q ss_pred eecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 392 HTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 392 ~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
++... ..+. ..++.|+.|+|||||++++..
T Consensus 193 ~~~a~---~~d~---~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 193 MVAAL---AEPK---RRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp EECTT---CSCH---HHHHHHHHHHCCTTCEEEEEE
T ss_pred EECCC---ccCH---HHHHHHHHHHcCCCcEEEEEc
Confidence 97544 2333 579999999999999999875
No 133
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.11 E-value=5e-11 Score=108.20 Aligned_cols=121 Identities=12% Similarity=0.054 Sum_probs=71.5
Q ss_pred CeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChh--HHHHHHHhC-CCCeeeecccCCCCCC-----Cccchheeccc
Q 046488 327 RIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAP--FNEMIALRG-LVPLYITINQRVPFFD-----NTLDLIHTTRF 396 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~--~~~~iA~rg-lip~~~~~ae~LPFpd-----~SFDlV~ss~v 396 (480)
.+|||+|||+|.++..+++. +..+++++++...- +...+...+ .+.+..+++.. ++++ ++||+|++.-.
T Consensus 32 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~fD~i~~npp 110 (215)
T 4dzr_A 32 TRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-WLIERAERGRPWHAIVSNPP 110 (215)
T ss_dssp EEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHH-HHHHHHHTTCCBSEEEECCC
T ss_pred CEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhhhhhhccCcccEEEECCC
Confidence 58999999999999999987 56888888763211 111111112 13334444444 6666 99999999543
Q ss_pred ccC------ccChh-----------------cHHHHHHHHHhcccCCcE-EEEeeccCChhhHHHHHHHHH--HcCceee
Q 046488 397 LDG------WIDFV-----------------LLDFILYDWDRVLRPGGL-LWIDSFFCAKEDMNDYLEVFK--MLKYKKH 450 (480)
Q Consensus 397 L~h------~~d~~-----------------~l~~~L~EI~RVLKPGG~-fiI~~f~~~~edL~~~~~~l~--~lGfkkl 450 (480)
+++ +.... ....++.++.|+|||||+ +++..- ....+.+.++++ ..||..+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---~~~~~~~~~~l~~~~~gf~~~ 187 (215)
T 4dzr_A 111 YIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG---HNQADEVARLFAPWRERGFRV 187 (215)
T ss_dssp CCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT---TSCHHHHHHHTGGGGGGTEEC
T ss_pred CCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC---CccHHHHHHHHHHhhcCCceE
Confidence 322 11110 014688999999999999 555322 223345666777 7788765
Q ss_pred E
Q 046488 451 K 451 (480)
Q Consensus 451 ~ 451 (480)
.
T Consensus 188 ~ 188 (215)
T 4dzr_A 188 R 188 (215)
T ss_dssp C
T ss_pred E
Confidence 4
No 134
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.11 E-value=1.4e-10 Score=106.47 Aligned_cols=97 Identities=18% Similarity=0.071 Sum_probs=70.8
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHH----HHHHhCC--CCeeeecccCCCCCCCccch
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNE----MIALRGL--VPLYITINQRVPFFDNTLDL 390 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~----~iA~rgl--ip~~~~~ae~LPFpd~SFDl 390 (480)
+.+.+.++ .+|||+|||+|.++..+++.+..+++++++. .+.. .+...+. +.+..++....+..+++||+
T Consensus 71 ~~l~~~~~--~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~--~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~ 146 (210)
T 3lbf_A 71 ELLELTPQ--SRVLEIGTGSGYQTAILAHLVQHVCSVERIK--GLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDA 146 (210)
T ss_dssp HHTTCCTT--CEEEEECCTTSHHHHHHHHHSSEEEEEESCH--HHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEE
T ss_pred HhcCCCCC--CEEEEEcCCCCHHHHHHHHhCCEEEEEecCH--HHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccE
Confidence 45555555 4899999999999999999888888888762 2222 2222232 33445566666667899999
Q ss_pred heecccccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 391 IHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 391 V~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
|++..+++++.+ ++.++|||||++++.
T Consensus 147 i~~~~~~~~~~~---------~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 147 IIVTAAPPEIPT---------ALMTQLDEGGILVLP 173 (210)
T ss_dssp EEESSBCSSCCT---------HHHHTEEEEEEEEEE
T ss_pred EEEccchhhhhH---------HHHHhcccCcEEEEE
Confidence 999988877653 578999999999885
No 135
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.10 E-value=6.8e-10 Score=110.79 Aligned_cols=135 Identities=18% Similarity=0.163 Sum_probs=84.7
Q ss_pred hhhHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC---CCEEEEEecCCChhHHH----HHHHhCC--CCeeeecccCCC
Q 046488 312 DFLIPEVLDIKPGEIRIGLDFSIGTGTFAARMREF---NVTLVSAIINLGAPFNE----MIALRGL--VPLYITINQRVP 382 (480)
Q Consensus 312 d~~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~~~~~----~iA~rgl--ip~~~~~ae~LP 382 (480)
..++..++++.++. +|||+|||+|..+..+++. +..+++++++. .+.. .+...+. +.+..+++..++
T Consensus 107 s~l~~~~l~~~~g~--~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~--~~l~~a~~~~~~~g~~~v~~~~~D~~~~~ 182 (315)
T 1ixk_A 107 SMYPPVALDPKPGE--IVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDE--NRLRETRLNLSRLGVLNVILFHSSSLHIG 182 (315)
T ss_dssp HHHHHHHHCCCTTC--EEEECCSSCSHHHHHHHHHTTTCSEEEEECSCH--HHHHHHHHHHHHHTCCSEEEESSCGGGGG
T ss_pred HHHHHHHhCCCCCC--EEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCH--HHHHHHHHHHHHhCCCeEEEEECChhhcc
Confidence 33455677777664 8999999999999999874 35788887652 2222 2222233 234445566676
Q ss_pred CCCCccchheec------ccccCccC------hh-------cHHHHHHHHHhcccCCcEEEEeecc-CChhhHHHHHHHH
Q 046488 383 FFDNTLDLIHTT------RFLDGWID------FV-------LLDFILYDWDRVLRPGGLLWIDSFF-CAKEDMNDYLEVF 442 (480)
Q Consensus 383 Fpd~SFDlV~ss------~vL~h~~d------~~-------~l~~~L~EI~RVLKPGG~fiI~~f~-~~~edL~~~~~~l 442 (480)
..+++||+|++. .++.+.++ .. ....+|.++.|+|||||+++++... ...+....+..++
T Consensus 183 ~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l 262 (315)
T 1ixk_A 183 ELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWAL 262 (315)
T ss_dssp GGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHH
T ss_pred cccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHH
Confidence 667899999973 22322111 00 0136899999999999999987532 2233333455667
Q ss_pred HHcCceee
Q 046488 443 KMLKYKKH 450 (480)
Q Consensus 443 ~~lGfkkl 450 (480)
++.||+.+
T Consensus 263 ~~~~~~~~ 270 (315)
T 1ixk_A 263 DNFDVELL 270 (315)
T ss_dssp HHSSEEEE
T ss_pred hcCCCEEe
Confidence 77787644
No 136
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.10 E-value=7.2e-11 Score=123.84 Aligned_cols=108 Identities=13% Similarity=0.065 Sum_probs=74.2
Q ss_pred hcCCCCCCCCeEEEECCCCcHHHHHHhhC-CCE-EEEEecCCChh--HHHHH-------HHhC----CCCeeeecccCCC
Q 046488 318 VLDIKPGEIRIGLDFSIGTGTFAARMREF-NVT-LVSAIINLGAP--FNEMI-------ALRG----LVPLYITINQRVP 382 (480)
Q Consensus 318 vL~l~~g~iR~VLDVGCGtG~fAa~Lae~-gV~-Vv~vd~d~~~~--~~~~i-------A~rg----lip~~~~~ae~LP 382 (480)
.+.+.++. +|||||||+|.++..++.. +.. +++++++.... +..++ +..| .+.++.+++..+|
T Consensus 168 ~l~l~~gd--~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp 245 (438)
T 3uwp_A 168 EIKMTDDD--LFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEE 245 (438)
T ss_dssp HHCCCTTC--EEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHH
T ss_pred hcCCCCCC--EEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCc
Confidence 44566664 8999999999999988854 654 88888752111 11111 1112 2456677888888
Q ss_pred CCC--CccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCC
Q 046488 383 FFD--NTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCA 431 (480)
Q Consensus 383 Fpd--~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~ 431 (480)
|.+ ..||+|+++..+ ++.+. ...|.|++|+|||||+|++...++.
T Consensus 246 ~~d~~~~aDVVf~Nn~~-F~pdl---~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 246 WRERIANTSVIFVNNFA-FGPEV---DHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp HHHHHHTCSEEEECCTT-CCHHH---HHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred cccccCCccEEEEcccc-cCchH---HHHHHHHHHcCCCCcEEEEeecccC
Confidence 865 589999987654 34333 5689999999999999998855443
No 137
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.09 E-value=3.6e-10 Score=107.03 Aligned_cols=122 Identities=17% Similarity=0.254 Sum_probs=83.2
Q ss_pred HHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC---CCEEEEEecCCChhHHH----HHHHhCC---CCeeeecccCCCCC
Q 046488 315 IPEVLDIKPGEIRIGLDFSIGTGTFAARMREF---NVTLVSAIINLGAPFNE----MIALRGL---VPLYITINQRVPFF 384 (480)
Q Consensus 315 I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~~~~~----~iA~rgl---ip~~~~~ae~LPFp 384 (480)
+-..+.+.++. +|||+|||+|.++..+++. +..+++++++. .+.. .++..+. +.+..++... +++
T Consensus 85 i~~~~~~~~~~--~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~--~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~ 159 (255)
T 3mb5_A 85 IVAYAGISPGD--FIVEAGVGSGALTLFLANIVGPEGRVVSYEIRE--DFAKLAWENIKWAGFDDRVTIKLKDIYE-GIE 159 (255)
T ss_dssp HHHHTTCCTTC--EEEEECCTTSHHHHHHHHHHCTTSEEEEECSCH--HHHHHHHHHHHHHTCTTTEEEECSCGGG-CCC
T ss_pred HHHhhCCCCCC--EEEEecCCchHHHHHHHHHhCCCeEEEEEecCH--HHHHHHHHHHHHcCCCCceEEEECchhh-ccC
Confidence 33455565554 8999999999999999987 67888887652 2222 2222232 3334444443 377
Q ss_pred CCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcC--ceeeE
Q 046488 385 DNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLK--YKKHK 451 (480)
Q Consensus 385 d~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lG--fkkl~ 451 (480)
+++||+|++ +..++. .++.++.|+|||||++++... ..+....+.+.++..| |..+.
T Consensus 160 ~~~~D~v~~-----~~~~~~---~~l~~~~~~L~~gG~l~~~~~--~~~~~~~~~~~l~~~g~~f~~~~ 218 (255)
T 3mb5_A 160 EENVDHVIL-----DLPQPE---RVVEHAAKALKPGGFFVAYTP--CSNQVMRLHEKLREFKDYFMKPR 218 (255)
T ss_dssp CCSEEEEEE-----CSSCGG---GGHHHHHHHEEEEEEEEEEES--SHHHHHHHHHHHHHTGGGBSCCE
T ss_pred CCCcCEEEE-----CCCCHH---HHHHHHHHHcCCCCEEEEEEC--CHHHHHHHHHHHHHcCCCccccE
Confidence 899999997 334442 489999999999999988532 2345566778888888 86553
No 138
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.09 E-value=1.3e-10 Score=114.83 Aligned_cols=96 Identities=17% Similarity=0.148 Sum_probs=68.6
Q ss_pred CeEEEECCCCcH----HHHHHhhC------CCEEEEEecCCChhHHHHHHHhCC--------------------------
Q 046488 327 RIGLDFSIGTGT----FAARMREF------NVTLVSAIINLGAPFNEMIALRGL-------------------------- 370 (480)
Q Consensus 327 R~VLDVGCGtG~----fAa~Lae~------gV~Vv~vd~d~~~~~~~~iA~rgl-------------------------- 370 (480)
.+|||+|||||. +|..|++. +..++++|++. .+. ..|+++.
T Consensus 107 ~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~--~~L-~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~ 183 (274)
T 1af7_A 107 YRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDT--EVL-EKARSGIYRLSELKTLSPQQLQRYFMRGTGPHE 183 (274)
T ss_dssp EEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCH--HHH-HHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSC
T ss_pred cEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCH--HHH-HHHHhcCCchhhhhcCCHHHHHHHhhccccCCC
Confidence 479999999998 66667664 36788888762 333 3344432
Q ss_pred ------------CCeeeecccCCCCC-CCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 371 ------------VPLYITINQRVPFF-DNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 371 ------------ip~~~~~ae~LPFp-d~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
+.+...+....||+ ++.||+|+|..+++++.+.. ...++.+++++|||||+|++.
T Consensus 184 ~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~-~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 184 GLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTT-QEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp SEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHH-HHHHHHHHGGGEEEEEEEEEC
T ss_pred CceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHH-HHHHHHHHHHHhCCCcEEEEE
Confidence 11222334445665 68899999999998886543 368999999999999999884
No 139
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.09 E-value=3e-10 Score=110.06 Aligned_cols=119 Identities=11% Similarity=0.016 Sum_probs=81.3
Q ss_pred hcCCCCCCCCeEEEECCCCcHHHHHHhhC---CCEEEEEecCCChhHHHHH----HHh-CC--CCeeeecccCCCCCCCc
Q 046488 318 VLDIKPGEIRIGLDFSIGTGTFAARMREF---NVTLVSAIINLGAPFNEMI----ALR-GL--VPLYITINQRVPFFDNT 387 (480)
Q Consensus 318 vL~l~~g~iR~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~~~~~~i----A~r-gl--ip~~~~~ae~LPFpd~S 387 (480)
.+.+.++ .+|||+|||+|.++..+++. +..+++++++. .+...+ ... +. +.+..+++.. ++++++
T Consensus 105 ~~~~~~~--~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~ 179 (275)
T 1yb2_A 105 RCGLRPG--MDILEVGVGSGNMSSYILYALNGKGTLTVVERDE--DNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQM 179 (275)
T ss_dssp -CCCCTT--CEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCH--HHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCC
T ss_pred HcCCCCc--CEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCH--HHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCC
Confidence 3445554 48999999999999999886 67888887652 222221 111 21 3334455544 677889
Q ss_pred cchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeE
Q 046488 388 LDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHK 451 (480)
Q Consensus 388 FDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~ 451 (480)
||+|++ +++++. .++.++.|+|||||++++... ..+..+.+.+.++..||..+.
T Consensus 180 fD~Vi~-----~~~~~~---~~l~~~~~~LkpgG~l~i~~~--~~~~~~~~~~~l~~~Gf~~~~ 233 (275)
T 1yb2_A 180 YDAVIA-----DIPDPW---NHVQKIASMMKPGSVATFYLP--NFDQSEKTVLSLSASGMHHLE 233 (275)
T ss_dssp EEEEEE-----CCSCGG---GSHHHHHHTEEEEEEEEEEES--SHHHHHHHHHHSGGGTEEEEE
T ss_pred ccEEEE-----cCcCHH---HHHHHHHHHcCCCCEEEEEeC--CHHHHHHHHHHHHHCCCeEEE
Confidence 999997 344443 589999999999999988642 233445666778888998654
No 140
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.09 E-value=2.2e-10 Score=106.76 Aligned_cols=97 Identities=19% Similarity=0.157 Sum_probs=69.1
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhC-----CCCeeeecccCCCCCCCccchh
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRG-----LVPLYITINQRVPFFDNTLDLI 391 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rg-----lip~~~~~ae~LPFpd~SFDlV 391 (480)
+.+.+.++. +|||+|||+|.++..+++.+..+++++++. .+. ..+.+. .+.+..++.......+++||+|
T Consensus 64 ~~~~~~~~~--~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~--~~~-~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 138 (231)
T 1vbf_A 64 DELDLHKGQ--KVLEIGTGIGYYTALIAEIVDKVVSVEINE--KMY-NYASKLLSYYNNIKLILGDGTLGYEEEKPYDRV 138 (231)
T ss_dssp HHTTCCTTC--EEEEECCTTSHHHHHHHHHSSEEEEEESCH--HHH-HHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEE
T ss_pred HhcCCCCCC--EEEEEcCCCCHHHHHHHHHcCEEEEEeCCH--HHH-HHHHHHHhhcCCeEEEECCcccccccCCCccEE
Confidence 445555553 899999999999999999888888888752 232 222221 3344455544423357899999
Q ss_pred eecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 392 HTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 392 ~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
++..+++|+. .++.|+|||||++++..
T Consensus 139 ~~~~~~~~~~---------~~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 139 VVWATAPTLL---------CKPYEQLKEGGIMILPI 165 (231)
T ss_dssp EESSBBSSCC---------HHHHHTEEEEEEEEEEE
T ss_pred EECCcHHHHH---------HHHHHHcCCCcEEEEEE
Confidence 9999887654 36889999999998863
No 141
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.08 E-value=1.7e-10 Score=115.48 Aligned_cols=99 Identities=20% Similarity=0.277 Sum_probs=71.3
Q ss_pred CeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChhHHH-HHHHhCC---CCeeeecccCCCCCCCccchheecccccCcc
Q 046488 327 RIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNE-MIALRGL---VPLYITINQRVPFFDNTLDLIHTTRFLDGWI 401 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~~~~-~iA~rgl---ip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~ 401 (480)
.+|||+|||+|.++..+++.|. .+++++++....... .++..+. +.+..++++.+++++++||+|++.....++.
T Consensus 40 ~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~ 119 (328)
T 1g6q_1 40 KIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYFLL 119 (328)
T ss_dssp CEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBTTBS
T ss_pred CEEEEecCccHHHHHHHHHCCCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchhhcc
Confidence 4899999999999999998875 788888762111111 2222332 3455677888899889999999875444433
Q ss_pred ChhcHHHHHHHHHhcccCCcEEEE
Q 046488 402 DFVLLDFILYDWDRVLRPGGLLWI 425 (480)
Q Consensus 402 d~~~l~~~L~EI~RVLKPGG~fiI 425 (480)
....+..++.++.|+|||||+++.
T Consensus 120 ~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 120 YESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cHHHHHHHHHHHHhhcCCCeEEEE
Confidence 333346799999999999999874
No 142
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.08 E-value=2e-10 Score=104.45 Aligned_cols=100 Identities=16% Similarity=0.075 Sum_probs=68.8
Q ss_pred CeEEEECCCCcHHHHHHhhCCC-EEEEEecCCCh--hHHHHHHHhCC--CCeeeecccCCC--CCCCccchheecccccC
Q 046488 327 RIGLDFSIGTGTFAARMREFNV-TLVSAIINLGA--PFNEMIALRGL--VPLYITINQRVP--FFDNTLDLIHTTRFLDG 399 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~--~~~~~iA~rgl--ip~~~~~ae~LP--Fpd~SFDlV~ss~vL~h 399 (480)
.+|||+|||+|.++..+++++. .+++++++... .+...+...+. +.+..+++..++ +++++||+|++...+++
T Consensus 46 ~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~ 125 (189)
T 3p9n_A 46 LAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPYNV 125 (189)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCTTS
T ss_pred CEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCCCc
Confidence 4899999999999998887764 68888865311 11122223332 344555554443 45899999999877654
Q ss_pred ccChhcHHHHHHHHHh--cccCCcEEEEeec
Q 046488 400 WIDFVLLDFILYDWDR--VLRPGGLLWIDSF 428 (480)
Q Consensus 400 ~~d~~~l~~~L~EI~R--VLKPGG~fiI~~f 428 (480)
..+ .+..++.++.| +|||||++++...
T Consensus 126 ~~~--~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 126 DSA--DVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp CHH--HHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred chh--hHHHHHHHHHhcCccCCCeEEEEEec
Confidence 322 23679999999 9999999999653
No 143
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.08 E-value=3e-10 Score=108.03 Aligned_cols=124 Identities=14% Similarity=0.174 Sum_probs=73.0
Q ss_pred CeEEEECCCCcHHHHHHhh--CCCEEEEEecCCChhHHHHH--HH-----hCC--CCeeeecccCCCCCCCccchheecc
Q 046488 327 RIGLDFSIGTGTFAARMRE--FNVTLVSAIINLGAPFNEMI--AL-----RGL--VPLYITINQRVPFFDNTLDLIHTTR 395 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae--~gV~Vv~vd~d~~~~~~~~i--A~-----rgl--ip~~~~~ae~LPFpd~SFDlV~ss~ 395 (480)
.+|||||||+|.++..|++ .+..++++|++. ..+.+.. |. .+. +.+..++++.+|. ..||.|.+..
T Consensus 26 ~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~-~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~--~~~d~v~~i~ 102 (225)
T 3p2e_A 26 RVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVK-ENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPF--ELKNIADSIS 102 (225)
T ss_dssp EEEEEETCTTSHHHHHHHHTCTTEEEEEECSCC-GGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCG--GGTTCEEEEE
T ss_pred CEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCH-HHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhh--hccCeEEEEE
Confidence 4899999999999999984 467788888762 1222211 12 222 2234456777753 3335444443
Q ss_pred cccCccCh-----hcHHHHHHHHHhcccCCcEEEEee-ccCC---------------hhhH--HHHHHHHHHcCceeeEE
Q 046488 396 FLDGWIDF-----VLLDFILYDWDRVLRPGGLLWIDS-FFCA---------------KEDM--NDYLEVFKMLKYKKHKW 452 (480)
Q Consensus 396 vL~h~~d~-----~~l~~~L~EI~RVLKPGG~fiI~~-f~~~---------------~edL--~~~~~~l~~lGfkkl~W 452 (480)
+..+|... .....++.|+.|+|||||+|++.. .... .+.. .++.+.++..||.....
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~~ 182 (225)
T 3p2e_A 103 ILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDDV 182 (225)
T ss_dssp EESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEEEEE
T ss_pred EeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCeeee
Confidence 33333211 001358999999999999998821 1000 0001 13677888899986554
Q ss_pred E
Q 046488 453 V 453 (480)
Q Consensus 453 ~ 453 (480)
.
T Consensus 183 ~ 183 (225)
T 3p2e_A 183 K 183 (225)
T ss_dssp E
T ss_pred e
Confidence 3
No 144
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.08 E-value=1.3e-11 Score=116.09 Aligned_cols=118 Identities=10% Similarity=0.021 Sum_probs=80.6
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHH----HHHHhCC---CCeeeecccCCCCCCCccchheecccccC
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNE----MIALRGL---VPLYITINQRVPFFDNTLDLIHTTRFLDG 399 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~----~iA~rgl---ip~~~~~ae~LPFpd~SFDlV~ss~vL~h 399 (480)
.+|||+|||+|.++..+++.+..+++++++. .+.. .+...+. +.+..+++..++ ++++||+|++...+++
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~~ 156 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTGMRVIAIDIDP--VKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWGG 156 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCSS
T ss_pred CEEEECccccCHHHHHHHHcCCEEEEEECCH--HHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcCC
Confidence 4899999999999999999998899888763 2222 2222232 345556666666 6789999999988877
Q ss_pred ccChhcHHHHHHHHHhcccCCcEEEEee----------ccCChhhHHHHHHHHHHcCceee
Q 046488 400 WIDFVLLDFILYDWDRVLRPGGLLWIDS----------FFCAKEDMNDYLEVFKMLKYKKH 450 (480)
Q Consensus 400 ~~d~~~l~~~L~EI~RVLKPGG~fiI~~----------f~~~~edL~~~~~~l~~lGfkkl 450 (480)
..... ..+.++.|+|||||++++.. +.....+++.+..++..-|.-.+
T Consensus 157 ~~~~~---~~~~~~~~~L~pgG~~i~~~~~~~~~~~~~~lp~~~~~~~~~~~l~~~g~~~i 214 (241)
T 3gdh_A 157 PDYAT---AETFDIRTMMSPDGFEIFRLSKKITNNIVYFLPRNADIDQVASLAGPGGQVEI 214 (241)
T ss_dssp GGGGG---SSSBCTTTSCSSCHHHHHHHHHHHCSCEEEEEETTBCHHHHHHTTCTTCCEEE
T ss_pred cchhh---hHHHHHHhhcCCcceeHHHHHHhhCCceEEECCCCCCHHHHHHHhccCCCEEE
Confidence 65543 36789999999999977652 22222234555555555554433
No 145
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.06 E-value=5.3e-10 Score=109.46 Aligned_cols=102 Identities=14% Similarity=0.053 Sum_probs=71.3
Q ss_pred CCeEEEECCCC---cHHHHHHhhC--CCEEEEEecCCChhHHHHHHHh----CCCCeeeecccCC-----------CCCC
Q 046488 326 IRIGLDFSIGT---GTFAARMREF--NVTLVSAIINLGAPFNEMIALR----GLVPLYITINQRV-----------PFFD 385 (480)
Q Consensus 326 iR~VLDVGCGt---G~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA~r----glip~~~~~ae~L-----------PFpd 385 (480)
.++|||||||+ |.++..+.+. +..++++|++ ..+......+ +.+.++.++.... .++.
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~s--p~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~ 155 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDID--PMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDF 155 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESS--HHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCT
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECC--hHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCC
Confidence 46899999999 9988776653 5788888865 2333322111 2234444544321 1233
Q ss_pred CccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccC
Q 046488 386 NTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFC 430 (480)
Q Consensus 386 ~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~ 430 (480)
++||+|++..+++|+.+. ....+|.++.|+|||||+|++.++..
T Consensus 156 ~~~d~v~~~~vlh~~~d~-~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 156 SRPAAIMLVGMLHYLSPD-VVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp TSCCEEEETTTGGGSCTT-THHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCCEEEEEechhhhCCcH-HHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 589999999999998764 23679999999999999999987654
No 146
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.06 E-value=1.4e-10 Score=113.80 Aligned_cols=99 Identities=8% Similarity=-0.069 Sum_probs=65.2
Q ss_pred CCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhC---------CCCee--eecccCCCCCCCccc
Q 046488 321 IKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRG---------LVPLY--ITINQRVPFFDNTLD 389 (480)
Q Consensus 321 l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rg---------lip~~--~~~ae~LPFpd~SFD 389 (480)
+.++ .+|||+|||+|.++..++++ ..|+++|++.. ... +.+. .+.+. .+++..+| +++||
T Consensus 72 ~~~g--~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~m---~~~-a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD 142 (265)
T 2oxt_A 72 VELT--GRVVDLGCGRGGWSYYAASR-PHVMDVRAYTL---GVG-GHEVPRITESYGWNIVKFKSRVDIHTLP--VERTD 142 (265)
T ss_dssp CCCC--EEEEEESCTTSHHHHHHHTS-TTEEEEEEECC---CCS-SCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCS
T ss_pred CCCC--CEEEEeCcCCCHHHHHHHHc-CcEEEEECchh---hhh-hhhhhhhhhccCCCeEEEecccCHhHCC--CCCCc
Confidence 4444 48999999999999999988 56777776531 000 1001 12334 44555555 88999
Q ss_pred hheecccccCccCh----hcHHHHHHHHHhcccCCc--EEEEeecc
Q 046488 390 LIHTTRFLDGWIDF----VLLDFILYDWDRVLRPGG--LLWIDSFF 429 (480)
Q Consensus 390 lV~ss~vL~h~~d~----~~l~~~L~EI~RVLKPGG--~fiI~~f~ 429 (480)
+|+|..+ .+.... .....+|.++.|+||||| .|++..|.
T Consensus 143 ~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 143 VIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred EEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 9999766 322221 100137899999999999 99987665
No 147
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.05 E-value=2.5e-10 Score=114.66 Aligned_cols=120 Identities=13% Similarity=0.026 Sum_probs=83.7
Q ss_pred CeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHHHHHHh-CCCCeeeecccCCCCCCCccchheecccccCccCh
Q 046488 327 RIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNEMIALR-GLVPLYITINQRVPFFDNTLDLIHTTRFLDGWIDF 403 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA~r-glip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d~ 403 (480)
.+|||||||+|.++..++++ +..++++++. .+.. .+.+ ..+.+..++... |++ .||+|++..++++|.+.
T Consensus 195 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~---~~~~-~a~~~~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d~ 267 (358)
T 1zg3_A 195 ESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQP---QVVG-NLTGNENLNFVGGDMFK-SIP--SADAVLLKWVLHDWNDE 267 (358)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTSEEEEEECH---HHHS-SCCCCSSEEEEECCTTT-CCC--CCSEEEEESCGGGSCHH
T ss_pred CEEEEECCCcCHHHHHHHHHCCCCeEEEeccH---HHHh-hcccCCCcEEEeCccCC-CCC--CceEEEEcccccCCCHH
Confidence 58999999999999999886 5677776641 2221 1111 123444455444 665 49999999999999875
Q ss_pred hcHHHHHHHHHhcccC---CcEEEEeeccCCh--------h------------------hHHHHHHHHHHcCceeeEEEE
Q 046488 404 VLLDFILYDWDRVLRP---GGLLWIDSFFCAK--------E------------------DMNDYLEVFKMLKYKKHKWVV 454 (480)
Q Consensus 404 ~~l~~~L~EI~RVLKP---GG~fiI~~f~~~~--------e------------------dL~~~~~~l~~lGfkkl~W~~ 454 (480)
.. ..+|+++.|+||| ||+++|.++.... . ..++|.++++..||+.+....
T Consensus 268 ~~-~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 346 (358)
T 1zg3_A 268 QS-LKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITP 346 (358)
T ss_dssp HH-HHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEEEEE
T ss_pred HH-HHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCeeEEEe
Confidence 42 4799999999999 9999987543211 0 124577899999998776433
No 148
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.05 E-value=9.7e-10 Score=102.63 Aligned_cols=155 Identities=19% Similarity=0.304 Sum_probs=89.6
Q ss_pred hHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC---CCEEEEEecCCCh--hHHHHHHHhCC---CCeeeecc-cCCCCC
Q 046488 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMREF---NVTLVSAIINLGA--PFNEMIALRGL---VPLYITIN-QRVPFF 384 (480)
Q Consensus 314 ~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~--~~~~~iA~rgl---ip~~~~~a-e~LPFp 384 (480)
++..++...++ .+|||+|||+|.++..+++. +..+++++++... .+...+...+. +.+..+++ +.++..
T Consensus 49 ~l~~l~~~~~~--~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~ 126 (221)
T 3u81_A 49 IMDAVIREYSP--SLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQL 126 (221)
T ss_dssp HHHHHHHHHCC--SEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGT
T ss_pred HHHHHHHhcCC--CEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHH
Confidence 44445444333 48999999999999999984 6788888875211 11122223343 34445553 334443
Q ss_pred C-----CccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHc-CceeeEEEEeecc
Q 046488 385 D-----NTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKML-KYKKHKWVVVPKR 458 (480)
Q Consensus 385 d-----~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~l-Gfkkl~W~~~~k~ 458 (480)
+ ++||+|++....+++.+. ..++.++ |+|||||++++++..... ...+.+.++.. +|...........
T Consensus 127 ~~~~~~~~fD~V~~d~~~~~~~~~---~~~~~~~-~~LkpgG~lv~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~ 200 (221)
T 3u81_A 127 KKKYDVDTLDMVFLDHWKDRYLPD---TLLLEKC-GLLRKGTVLLADNVIVPG--TPDFLAYVRGSSSFECTHYSSYLEY 200 (221)
T ss_dssp TTTSCCCCCSEEEECSCGGGHHHH---HHHHHHT-TCCCTTCEEEESCCCCCC--CHHHHHHHHHCTTEEEEEEEEEETT
T ss_pred HHhcCCCceEEEEEcCCcccchHH---HHHHHhc-cccCCCeEEEEeCCCCcc--hHHHHHHHhhCCCceEEEccccccc
Confidence 3 799999988766655433 2467777 999999999998654332 23344444432 3433322211111
Q ss_pred CCCCcceeEEEEEEeCCCC
Q 046488 459 DKDDREVFFSAVLEKPPRP 477 (480)
Q Consensus 459 d~~~~E~~lsav~qKP~~~ 477 (480)
....+.+..++++.|-.+
T Consensus 201 -~~~~dG~~~~~~~g~~~~ 218 (221)
T 3u81_A 201 -MKVVDGLEKAIYQGPSSP 218 (221)
T ss_dssp -TTEEEEEEEEEECCCCCC
T ss_pred -CCCCCceEEEEEeCCCCC
Confidence 123445667778776543
No 149
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.04 E-value=1.1e-09 Score=100.14 Aligned_cols=110 Identities=7% Similarity=0.000 Sum_probs=72.4
Q ss_pred CeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHH----HHHHhCC--CCeeeecccCCCCCCCccchheeccccc
Q 046488 327 RIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNE----MIALRGL--VPLYITINQRVPFFDNTLDLIHTTRFLD 398 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~----~iA~rgl--ip~~~~~ae~LPFpd~SFDlV~ss~vL~ 398 (480)
.+|||+|||+|.++..++.. +..+++++++. .+.. .+...+. +.+..++...++ ++++||+|++.. +
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~-~- 141 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLG--KRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRA-F- 141 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHCTTSEEEEEESCH--HHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSC-S-
T ss_pred CeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCH--HHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEec-c-
Confidence 48999999999999999875 67888888652 2222 2222232 334445555555 568999999753 2
Q ss_pred CccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeE
Q 046488 399 GWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHK 451 (480)
Q Consensus 399 h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~ 451 (480)
.+. ..++.++.++|||||++++.......+++. ++++ ||+.+.
T Consensus 142 --~~~---~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~---~~~~--g~~~~~ 184 (207)
T 1jsx_A 142 --ASL---NDMVSWCHHLPGEQGRFYALKGQMPEDEIA---LLPE--EYQVES 184 (207)
T ss_dssp --SSH---HHHHHHHTTSEEEEEEEEEEESSCCHHHHH---TSCT--TEEEEE
T ss_pred --CCH---HHHHHHHHHhcCCCcEEEEEeCCCchHHHH---HHhc--CCceee
Confidence 222 469999999999999998864333333333 2332 777554
No 150
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.04 E-value=7.6e-10 Score=106.19 Aligned_cols=120 Identities=17% Similarity=0.150 Sum_probs=81.3
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhC---CCEEEEEecCCChhHHH----HHHHh-C----CCCeeeecccCCCCC
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREF---NVTLVSAIINLGAPFNE----MIALR-G----LVPLYITINQRVPFF 384 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~~~~~----~iA~r-g----lip~~~~~ae~LPFp 384 (480)
..+.+.++. +|||+|||+|.++..+++. +..+++++.+. .+.. .++.. + .+.+..+++..++++
T Consensus 93 ~~~~~~~~~--~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~--~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~ 168 (280)
T 1i9g_A 93 HEGDIFPGA--RVLEAGAGSGALTLSLLRAVGPAGQVISYEQRA--DHAEHARRNVSGCYGQPPDNWRLVVSDLADSELP 168 (280)
T ss_dssp HHTTCCTTC--EEEEECCTTSHHHHHHHHHHCTTSEEEEECSCH--HHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCC
T ss_pred HHcCCCCCC--EEEEEcccccHHHHHHHHHhCCCCEEEEEeCCH--HHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCC
Confidence 445566554 8999999999999999885 56888887652 2222 22222 3 234455667777888
Q ss_pred CCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHH-cCceee
Q 046488 385 DNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKM-LKYKKH 450 (480)
Q Consensus 385 d~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~-lGfkkl 450 (480)
+++||+|++. ..++. .++.++.|+|||||++++... ..+.+..+.+.++. .+|...
T Consensus 169 ~~~~D~v~~~-----~~~~~---~~l~~~~~~L~pgG~l~~~~~--~~~~~~~~~~~l~~~~~f~~~ 225 (280)
T 1i9g_A 169 DGSVDRAVLD-----MLAPW---EVLDAVSRLLVAGGVLMVYVA--TVTQLSRIVEALRAKQCWTEP 225 (280)
T ss_dssp TTCEEEEEEE-----SSCGG---GGHHHHHHHEEEEEEEEEEES--SHHHHHHHHHHHHHHSSBCCC
T ss_pred CCceeEEEEC-----CcCHH---HHHHHHHHhCCCCCEEEEEeC--CHHHHHHHHHHHHhcCCcCCc
Confidence 9999999972 23332 489999999999999988543 23444555555555 677643
No 151
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.04 E-value=2.2e-10 Score=113.14 Aligned_cols=95 Identities=7% Similarity=-0.090 Sum_probs=63.8
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhC---------CCCee--eecccCCCCCCCccchheecc
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRG---------LVPLY--ITINQRVPFFDNTLDLIHTTR 395 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rg---------lip~~--~~~ae~LPFpd~SFDlV~ss~ 395 (480)
.+|||+|||+|.++..++++ ..|+++|++.. ..+ +.+. .+.+. .++++.+| +++||+|+|..
T Consensus 84 ~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~m---~~~-a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd~ 156 (276)
T 2wa2_A 84 GTVVDLGCGRGSWSYYAASQ-PNVREVKAYTL---GTS-GHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLCDI 156 (276)
T ss_dssp EEEEEESCTTCHHHHHHHTS-TTEEEEEEECC---CCT-TSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEECC
T ss_pred CEEEEeccCCCHHHHHHHHc-CCEEEEECchh---hhh-hhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEECC
Confidence 48999999999999999988 56777776531 110 1111 12334 44566665 88999999976
Q ss_pred cccCccC----hhcHHHHHHHHHhcccCCc--EEEEeecc
Q 046488 396 FLDGWID----FVLLDFILYDWDRVLRPGG--LLWIDSFF 429 (480)
Q Consensus 396 vL~h~~d----~~~l~~~L~EI~RVLKPGG--~fiI~~f~ 429 (480)
+ ..... ......+|.++.|+||||| .|++..|.
T Consensus 157 ~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 157 G-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred C-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 6 22211 1100137899999999999 99987665
No 152
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.03 E-value=4.5e-10 Score=113.26 Aligned_cols=98 Identities=14% Similarity=0.150 Sum_probs=71.1
Q ss_pred CeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChhHHH-HHHHhCC---CCeeeecccCCCCCCCccchheecccccCcc
Q 046488 327 RIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNE-MIALRGL---VPLYITINQRVPFFDNTLDLIHTTRFLDGWI 401 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~~~~-~iA~rgl---ip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~ 401 (480)
.+|||||||+|.++..+++.+. .+++++++....... .++..+. +.+..++.+.++++ ++||+|++...++|+.
T Consensus 52 ~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~~~~~~ 130 (348)
T 2y1w_A 52 KIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLF 130 (348)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECCCBTTBT
T ss_pred CEEEEcCCCccHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeCchhcCC
Confidence 4899999999999999998865 888888763111111 2222232 34556667777765 6899999988888776
Q ss_pred ChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 402 DFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 402 d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
... +...+.++.|+|||||++++.
T Consensus 131 ~~~-~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 131 NER-MLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp TTS-HHHHHHHGGGGEEEEEEEESC
T ss_pred hHH-HHHHHHHHHhhcCCCeEEEEe
Confidence 443 245788999999999999864
No 153
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.02 E-value=2e-09 Score=104.20 Aligned_cols=124 Identities=13% Similarity=0.090 Sum_probs=75.8
Q ss_pred CCCCCCCeEEEECCCCcHHHHHHhhC---CCEEEEEecCCChhHH---HHHHHh-CCCCeeeecccCCC---CCCCccch
Q 046488 321 IKPGEIRIGLDFSIGTGTFAARMREF---NVTLVSAIINLGAPFN---EMIALR-GLVPLYITINQRVP---FFDNTLDL 390 (480)
Q Consensus 321 l~~g~iR~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~~~~---~~iA~r-glip~~~~~ae~LP---Fpd~SFDl 390 (480)
+++|. +|||+|||+|.++..+++. .-.|++++.+. .+. ...+.+ ..+....+++.... ...++||+
T Consensus 74 l~~g~--~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~--~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~ 149 (232)
T 3id6_C 74 IRKGT--KVLYLGAASGTTISHVSDIIELNGKAYGVEFSP--RVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDV 149 (232)
T ss_dssp CCTTC--EEEEETCTTSHHHHHHHHHHTTTSEEEEEECCH--HHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEE
T ss_pred CCCCC--EEEEEeecCCHHHHHHHHHhCCCCEEEEEECcH--HHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEE
Confidence 55664 8999999999999999875 33777777652 232 223333 33444555544322 22578999
Q ss_pred heecccccCccChhcHHHHHHHHHhcccCCcEEEEeec-cC-----Ch-hhHHHHHHHHHHcCceeeEEE
Q 046488 391 IHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF-FC-----AK-EDMNDYLEVFKMLKYKKHKWV 453 (480)
Q Consensus 391 V~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f-~~-----~~-edL~~~~~~l~~lGfkkl~W~ 453 (480)
|++.... ++.. ..++..+.|+|||||+|++.-. .| .. +..+.....++..||+.+.-.
T Consensus 150 I~~d~a~---~~~~--~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~ 214 (232)
T 3id6_C 150 LYVDIAQ---PDQT--DIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQII 214 (232)
T ss_dssp EEECCCC---TTHH--HHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEE
T ss_pred EEecCCC---hhHH--HHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEe
Confidence 9987543 2221 3345566779999999998621 11 11 112345567777798876543
No 154
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.01 E-value=2.5e-09 Score=102.42 Aligned_cols=107 Identities=18% Similarity=0.112 Sum_probs=69.2
Q ss_pred hHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC---CCEEEEEecCCCh--hHHHHHHHhCC---CCeeeecccC-CCCC
Q 046488 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMREF---NVTLVSAIINLGA--PFNEMIALRGL---VPLYITINQR-VPFF 384 (480)
Q Consensus 314 ~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~--~~~~~iA~rgl---ip~~~~~ae~-LPFp 384 (480)
++..++.+.++ .+|||||||+|.++..|++. +..+++++++... .+...++..+. +.+..+++.. ++..
T Consensus 54 ~l~~l~~~~~~--~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~ 131 (248)
T 3tfw_A 54 FLALLVRLTQA--KRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESL 131 (248)
T ss_dssp HHHHHHHHHTC--SEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTC
T ss_pred HHHHHHhhcCC--CEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhc
Confidence 34444444444 48999999999999999987 6788888875211 11122222232 3344555333 4543
Q ss_pred C--CccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeec
Q 046488 385 D--NTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 385 d--~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
+ ++||+|++.... .. ...++.++.|+|||||++++++.
T Consensus 132 ~~~~~fD~V~~d~~~---~~---~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 132 GECPAFDLIFIDADK---PN---NPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp CSCCCCSEEEECSCG---GG---HHHHHHHHHHTCCTTCEEEEECC
T ss_pred CCCCCeEEEEECCch---HH---HHHHHHHHHHhcCCCeEEEEeCC
Confidence 3 499999975421 11 24689999999999999998753
No 155
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.01 E-value=1e-09 Score=109.04 Aligned_cols=122 Identities=12% Similarity=-0.037 Sum_probs=79.3
Q ss_pred CCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHHHHHHhC-----------CCCeeeecccCCCC--CCCccch
Q 046488 326 IRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNEMIALRG-----------LVPLYITINQRVPF--FDNTLDL 390 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA~rg-----------lip~~~~~ae~LPF--pd~SFDl 390 (480)
..+|||||||+|.++..++++ ...+++++++ +.....+++. .+.++.+++..++. ++++||+
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid---~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTVEHCDLVDID---GEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTCCEEEEEESC---HHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECC---HHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 358999999999999999987 3477787766 2222232221 23445555555544 4889999
Q ss_pred heecccccCccChhcH--HHHHHHHHhcccCCcEEEEeecc--CChhhHHHHHHHHHHcCceeeE
Q 046488 391 IHTTRFLDGWIDFVLL--DFILYDWDRVLRPGGLLWIDSFF--CAKEDMNDYLEVFKMLKYKKHK 451 (480)
Q Consensus 391 V~ss~vL~h~~d~~~l--~~~L~EI~RVLKPGG~fiI~~f~--~~~edL~~~~~~l~~lGfkkl~ 451 (480)
|++......++.. .+ ..++.++.|+|||||++++..-. ......+.+.+.++..||..+.
T Consensus 173 Ii~d~~~~~~~~~-~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~ 236 (304)
T 3bwc_A 173 VIIDTTDPAGPAS-KLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQ 236 (304)
T ss_dssp EEEECC----------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEE
T ss_pred EEECCCCccccch-hhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEE
Confidence 9986554333221 11 35899999999999999886321 1223456677888999998664
No 156
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.00 E-value=3.8e-10 Score=112.81 Aligned_cols=118 Identities=11% Similarity=-0.030 Sum_probs=69.8
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEec----CCChhHHHHHHHhC----CCCeeee-cccCCCCCCCccchheecccc
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAII----NLGAPFNEMIALRG----LVPLYIT-INQRVPFFDNTLDLIHTTRFL 397 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~----d~~~~~~~~iA~rg----lip~~~~-~ae~LPFpd~SFDlV~ss~vL 397 (480)
.+|||+|||+|.++..+++++ .|+++++ ... .......+. .+.+..+ ++..+ ++++||+|+|..++
T Consensus 84 ~~VLDlGcG~G~~s~~la~~~-~V~gvD~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~D~~~l--~~~~fD~V~sd~~~ 158 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGLK-NVREVKGLTKGGPG--HEEPIPMSTYGWNLVRLQSGVDVFFI--PPERCDTLLCDIGE 158 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTST-TEEEEEEECCCSTT--SCCCCCCCSTTGGGEEEECSCCTTTS--CCCCCSEEEECCCC
T ss_pred CEEEEEcCCCCHHHHHHHhcC-CEEEEeccccCchh--HHHHHHhhhcCCCCeEEEeccccccC--CcCCCCEEEECCcc
Confidence 489999999999999999883 5667665 111 000000011 1223334 34444 46799999997665
Q ss_pred c--Cc-cChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceee
Q 046488 398 D--GW-IDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKH 450 (480)
Q Consensus 398 ~--h~-~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl 450 (480)
+ ++ .+......+|.++.|+|||||.|++..+.....+...+...++.. |..+
T Consensus 159 ~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~~~~~~~~~l~~l~~~-f~~v 213 (305)
T 2p41_A 159 SSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNPYMSSVIEKMEALQRK-HGGA 213 (305)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCCCSHHHHHHHHHHHHH-HCCE
T ss_pred ccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCCCCchHHHHHHHHHHH-cCCE
Confidence 3 22 122111148999999999999999866654434444444333332 4443
No 157
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.00 E-value=1.2e-09 Score=105.74 Aligned_cols=120 Identities=12% Similarity=0.041 Sum_probs=77.9
Q ss_pred CeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHH----HHHHhCC--CCeeeecccCCCCCCCccchheecc---
Q 046488 327 RIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNE----MIALRGL--VPLYITINQRVPFFDNTLDLIHTTR--- 395 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~----~iA~rgl--ip~~~~~ae~LPFpd~SFDlV~ss~--- 395 (480)
.+|||+|||+|.++..+++. +..+++++++. .+.. .+...+. +.+..++... ++++++||+|+++-
T Consensus 111 ~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~--~~l~~a~~n~~~~~~~~v~~~~~d~~~-~~~~~~fD~Iv~npPy~ 187 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASERPDCEIIAVDRMP--DAVSLAQRNAQHLAIKNIHILQSDWFS-ALAGQQFAMIVSNPPYI 187 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHHCTTSEEEEECSSH--HHHHHHHHHHHHHTCCSEEEECCSTTG-GGTTCCEEEEEECCCCB
T ss_pred CEEEEecCCccHHHHHHHHhCCCCEEEEEECCH--HHHHHHHHHHHHcCCCceEEEEcchhh-hcccCCccEEEECCCCC
Confidence 48999999999999999865 67888887652 2222 2222232 3334444333 34478999999973
Q ss_pred ----------cccCccCh---------hcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEE
Q 046488 396 ----------FLDGWIDF---------VLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKW 452 (480)
Q Consensus 396 ----------vL~h~~d~---------~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W 452 (480)
++.|.+.. .....++.++.++|||||++++..-... .+.+.++++..||..+..
T Consensus 188 ~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---~~~~~~~l~~~Gf~~v~~ 260 (276)
T 2b3t_A 188 DEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQ---GEAVRQAFILAGYHDVET 260 (276)
T ss_dssp CTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSC---HHHHHHHHHHTTCTTCCE
T ss_pred CccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchH---HHHHHHHHHHCCCcEEEE
Confidence 22222210 1235689999999999999998643322 345667788889976543
No 158
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.99 E-value=7.4e-10 Score=114.00 Aligned_cols=101 Identities=16% Similarity=0.153 Sum_probs=74.1
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChh--HHHHHHHhC-CCCeeeecccCCCCCCCccchheecccccCcc--
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAP--FNEMIALRG-LVPLYITINQRVPFFDNTLDLIHTTRFLDGWI-- 401 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~--~~~~iA~rg-lip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~-- 401 (480)
.+|||+|||+|.++..+++++..+++++++...- +...+...+ .+.++.+++..+++++++||+|+++..+++..
T Consensus 235 ~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~~~ 314 (381)
T 3dmg_A 235 RQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVGGAV 314 (381)
T ss_dssp CEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCTTCSS
T ss_pred CEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhhcccc
Confidence 4899999999999999999998999988763111 111222222 24456667777777789999999988776521
Q ss_pred ChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 402 DFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 402 d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
.......++.++.|+|||||++++..
T Consensus 315 ~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 315 ILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp CCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 12233679999999999999999864
No 159
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.99 E-value=1.8e-09 Score=105.56 Aligned_cols=114 Identities=13% Similarity=0.168 Sum_probs=80.0
Q ss_pred CeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChhHHH----HHHHhCC---CCeeeecccCCCCCCCccchheeccccc
Q 046488 327 RIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNE----MIALRGL---VPLYITINQRVPFFDNTLDLIHTTRFLD 398 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~~~~----~iA~rgl---ip~~~~~ae~LPFpd~SFDlV~ss~vL~ 398 (480)
.+|||+|||+|.++..+++.+. .+++++.+. .+.. .+...+. +.+..+++..++. +++||+|++...
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~--~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p-- 201 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDP--YTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV-- 201 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCCEEEEECCCH--HHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC--
T ss_pred CEEEEecccCCHHHHHHHHhCCCEEEEEECCH--HHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc--
Confidence 3899999999999999998876 488887652 2222 2222333 2245566777766 889999998432
Q ss_pred CccChhcHHHHHHHHHhcccCCcEEEEeeccCC----hhhHHHHHHHHHHcCceee
Q 046488 399 GWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCA----KEDMNDYLEVFKMLKYKKH 450 (480)
Q Consensus 399 h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~----~edL~~~~~~l~~lGfkkl 450 (480)
... ..++.++.|+|||||++++..+... .+..+.+.+.++..||+-.
T Consensus 202 --~~~---~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~ 252 (278)
T 2frn_A 202 --VRT---HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVE 252 (278)
T ss_dssp --SSG---GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEE
T ss_pred --hhH---HHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeE
Confidence 111 3489999999999999998765431 2345667888899998643
No 160
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.99 E-value=6.1e-09 Score=100.68 Aligned_cols=127 Identities=9% Similarity=0.032 Sum_probs=78.8
Q ss_pred HHhcCCCCCCCCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHHHHHHhC--------C---CCeeeecccCC-
Q 046488 316 PEVLDIKPGEIRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNEMIALRG--------L---VPLYITINQRV- 381 (480)
Q Consensus 316 ~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA~rg--------l---ip~~~~~ae~L- 381 (480)
...+...++ .+|||+|||+|.++..++++ +..+++++++. .+ ...|.+. . +.++.++...+
T Consensus 29 ~~~~~~~~~--~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~--~~-~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~ 103 (260)
T 2ozv_A 29 ASLVADDRA--CRIADLGAGAGAAGMAVAARLEKAEVTLYERSQ--EM-AEFARRSLELPDNAAFSARIEVLEADVTLRA 103 (260)
T ss_dssp HHTCCCCSC--EEEEECCSSSSHHHHHHHHHCTTEEEEEEESSH--HH-HHHHHHHTTSGGGTTTGGGEEEEECCTTCCH
T ss_pred HHHhcccCC--CEEEEeCChHhHHHHHHHHhCCCCeEEEEECCH--HH-HHHHHHHHHhhhhCCCcceEEEEeCCHHHHh
Confidence 344444443 48999999999999999987 46788888652 22 2222221 1 23444555554
Q ss_pred ------CCCCCccchheecccccCc---------------cChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHH
Q 046488 382 ------PFFDNTLDLIHTTRFLDGW---------------IDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLE 440 (480)
Q Consensus 382 ------PFpd~SFDlV~ss~vL~h~---------------~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~ 440 (480)
++++++||+|+++--+... .....+..++.++.++|||||+|++.. ..+.+..+.+
T Consensus 104 ~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~---~~~~~~~~~~ 180 (260)
T 2ozv_A 104 KARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS---RPQSVAEIIA 180 (260)
T ss_dssp HHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE---CGGGHHHHHH
T ss_pred hhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE---cHHHHHHHHH
Confidence 3678999999997222111 111224678999999999999998753 2234555666
Q ss_pred HHHHcCceeeE
Q 046488 441 VFKMLKYKKHK 451 (480)
Q Consensus 441 ~l~~lGfkkl~ 451 (480)
.++.. |....
T Consensus 181 ~l~~~-~~~~~ 190 (260)
T 2ozv_A 181 ACGSR-FGGLE 190 (260)
T ss_dssp HHTTT-EEEEE
T ss_pred HHHhc-CCceE
Confidence 66553 55443
No 161
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.99 E-value=3.1e-10 Score=107.45 Aligned_cols=97 Identities=14% Similarity=0.112 Sum_probs=66.6
Q ss_pred CeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHH----HHHHhCC--CCeeeecccC-CC--CCCCccchheecc
Q 046488 327 RIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNE----MIALRGL--VPLYITINQR-VP--FFDNTLDLIHTTR 395 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~----~iA~rgl--ip~~~~~ae~-LP--Fpd~SFDlV~ss~ 395 (480)
.+|||||||+|.++..+++. +..+++++++. ++.. .+...+. +.++.+++.. ++ +++++||.|++.+
T Consensus 36 ~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~--~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 36 PVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHS--PGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CEEEEESCTTCHHHHHHHHHCTTSEEEEECSCH--HHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CeEEEEeeeChHHHHHHHHHCCCCeEEEEEecH--HHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 48999999999999999976 56788887652 3322 2233333 2334455544 34 7899999999865
Q ss_pred cccCccChhcH------HHHHHHHHhcccCCcEEEEe
Q 046488 396 FLDGWIDFVLL------DFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 396 vL~h~~d~~~l------~~~L~EI~RVLKPGG~fiI~ 426 (480)
.. +|...... ..++.++.|+|||||+|++.
T Consensus 114 ~~-p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~ 149 (218)
T 3dxy_A 114 PD-PWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMA 149 (218)
T ss_dssp CC-CCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEE
T ss_pred CC-CccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEE
Confidence 43 34322110 24899999999999999885
No 162
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.98 E-value=2.2e-09 Score=103.77 Aligned_cols=120 Identities=17% Similarity=0.191 Sum_probs=80.1
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhC---CCEEEEEecCCChhHHH----HHHHhCC---CCeeeecccCCCCCCC
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREF---NVTLVSAIINLGAPFNE----MIALRGL---VPLYITINQRVPFFDN 386 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~~~~~----~iA~rgl---ip~~~~~ae~LPFpd~ 386 (480)
..+.+.++. +|||+|||+|.++..+++. +..+++++.+. .+.. .+...+. +.+..++.... ++++
T Consensus 106 ~~~~~~~~~--~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~ 180 (277)
T 1o54_A 106 MMLDVKEGD--RIIDTGVGSGAMCAVLARAVGSSGKVFAYEKRE--EFAKLAESNLTKWGLIERVTIKVRDISEG-FDEK 180 (277)
T ss_dssp HHTTCCTTC--EEEEECCTTSHHHHHHHHHTTTTCEEEEECCCH--HHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCC
T ss_pred HHhCCCCCC--EEEEECCcCCHHHHHHHHHhCCCcEEEEEECCH--HHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCC
Confidence 344555554 8999999999999999886 56788877652 2222 1222232 23334444444 6778
Q ss_pred ccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeE
Q 046488 387 TLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHK 451 (480)
Q Consensus 387 SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~ 451 (480)
+||+|++. .+++ ..++.++.|+|||||++++... ..+.+..+.+.++..||..+.
T Consensus 181 ~~D~V~~~-----~~~~---~~~l~~~~~~L~pgG~l~~~~~--~~~~~~~~~~~l~~~gf~~~~ 235 (277)
T 1o54_A 181 DVDALFLD-----VPDP---WNYIDKCWEALKGGGRFATVCP--TTNQVQETLKKLQELPFIRIE 235 (277)
T ss_dssp SEEEEEEC-----CSCG---GGTHHHHHHHEEEEEEEEEEES--SHHHHHHHHHHHHHSSEEEEE
T ss_pred ccCEEEEC-----CcCH---HHHHHHHHHHcCCCCEEEEEeC--CHHHHHHHHHHHHHCCCceeE
Confidence 99999973 3333 2489999999999999988642 234456667778888997543
No 163
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.97 E-value=7.3e-10 Score=106.19 Aligned_cols=115 Identities=16% Similarity=0.193 Sum_probs=71.9
Q ss_pred CeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHH----HHHH------hCC--CCeeeecccC-CC--CCCCccc
Q 046488 327 RIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNE----MIAL------RGL--VPLYITINQR-VP--FFDNTLD 389 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~----~iA~------rgl--ip~~~~~ae~-LP--Fpd~SFD 389 (480)
.+|||||||+|.++..|++. +..+++++++. .+.. .+.. .+. +.++.+++.. +| |++++||
T Consensus 48 ~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~--~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 48 VEFADIGCGYGGLLVELSPLFPDTLILGLEIRV--KVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp EEEEEETCTTCHHHHHHGGGSTTSEEEEEESCH--HHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CeEEEEccCCcHHHHHHHHHCCCCeEEEEECCH--HHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 47999999999999999986 56788888752 2322 1111 122 3345566655 77 8899999
Q ss_pred hheecccccCccCh------hcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcC
Q 046488 390 LIHTTRFLDGWIDF------VLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLK 446 (480)
Q Consensus 390 lV~ss~vL~h~~d~------~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lG 446 (480)
.|++.+.- +|... .....++.++.|+|||||.|++..-. ..-.....+.+...+
T Consensus 126 ~v~~~~~d-p~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~--~~~~~~~~~~l~~~~ 185 (235)
T 3ckk_A 126 KMFFLFPD-PHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV--LELHDWMCTHFEEHP 185 (235)
T ss_dssp EEEEESCC------------CCCHHHHHHHHHHEEEEEEEEEEESC--HHHHHHHHHHHHTST
T ss_pred EEEEeCCC-chhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC--HHHHHHHHHHHHHCC
Confidence 99865432 23210 00135899999999999999885311 111233445555554
No 164
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.95 E-value=2.3e-09 Score=99.39 Aligned_cols=107 Identities=13% Similarity=0.041 Sum_probs=68.3
Q ss_pred hHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC---CCEEEEEecCCCh--hHHHHHHHhCC---CCeeeeccc-CCC-C
Q 046488 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMREF---NVTLVSAIINLGA--PFNEMIALRGL---VPLYITINQ-RVP-F 383 (480)
Q Consensus 314 ~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~--~~~~~iA~rgl---ip~~~~~ae-~LP-F 383 (480)
++..++.+.++ .+|||+|||+|.++..+++. +..+++++++... .+...+...+. +.+..+++. .++ +
T Consensus 49 ~l~~l~~~~~~--~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 126 (223)
T 3duw_A 49 FLQLLVQIQGA--RNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQI 126 (223)
T ss_dssp HHHHHHHHHTC--SEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHH
T ss_pred HHHHHHHhhCC--CEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHH
Confidence 44444444444 48999999999999999987 6788888865211 11122223343 334444432 222 1
Q ss_pred C---CCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeec
Q 046488 384 F---DNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 384 p---d~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
+ .++||+|++..... . ...++.++.|+|||||++++.+.
T Consensus 127 ~~~~~~~fD~v~~d~~~~---~---~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 127 ENEKYEPFDFIFIDADKQ---N---NPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp HHTTCCCCSEEEECSCGG---G---HHHHHHHHHHTCCTTCEEEEESC
T ss_pred HhcCCCCcCEEEEcCCcH---H---HHHHHHHHHHhcCCCcEEEEeCC
Confidence 1 26799999765421 1 24689999999999999998753
No 165
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.95 E-value=1.1e-09 Score=104.09 Aligned_cols=111 Identities=10% Similarity=-0.008 Sum_probs=69.4
Q ss_pred hhHHHhcCC-CCCCCCeEEEECCCCcHHHHHHhhC----CCEEEEEecCCChhHHHHHHHh---CC--------------
Q 046488 313 FLIPEVLDI-KPGEIRIGLDFSIGTGTFAARMREF----NVTLVSAIINLGAPFNEMIALR---GL-------------- 370 (480)
Q Consensus 313 ~~I~~vL~l-~~g~iR~VLDVGCGtG~fAa~Lae~----gV~Vv~vd~d~~~~~~~~iA~r---gl-------------- 370 (480)
..+..++.. ......+|||+|||+|.++..+++. +..++++|++. .+.. .|++ ..
T Consensus 38 ~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~--~~l~-~A~~~~~~~~~~~~~~~~~~~~~ 114 (250)
T 1o9g_A 38 EIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDP--APLE-LAAKNLALLSPAGLTARELERRE 114 (250)
T ss_dssp HHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCH--HHHH-HHHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCH--HHHH-HHHHHHHHhhhccccccchhhhh
Confidence 345555542 2223358999999999999999876 56788888652 2222 2211 11
Q ss_pred -------------------CC-------------eeeecccC-CCC----CCCccchheecccccCccC------hhcHH
Q 046488 371 -------------------VP-------------LYITINQR-VPF----FDNTLDLIHTTRFLDGWID------FVLLD 407 (480)
Q Consensus 371 -------------------ip-------------~~~~~ae~-LPF----pd~SFDlV~ss~vL~h~~d------~~~l~ 407 (480)
+. +..++... ++. .+++||+|+|.-.+.+..+ .....
T Consensus 115 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~ 194 (250)
T 1o9g_A 115 QSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVA 194 (250)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHH
T ss_pred hhhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHH
Confidence 22 44444333 211 3458999999765443322 12335
Q ss_pred HHHHHHHhcccCCcEEEEe
Q 046488 408 FILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 408 ~~L~EI~RVLKPGG~fiI~ 426 (480)
.++.++.|+|||||++++.
T Consensus 195 ~~l~~~~~~LkpgG~l~~~ 213 (250)
T 1o9g_A 195 GLLRSLASALPAHAVIAVT 213 (250)
T ss_dssp HHHHHHHHHSCTTCEEEEE
T ss_pred HHHHHHHHhcCCCcEEEEe
Confidence 7999999999999999985
No 166
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.95 E-value=2.8e-09 Score=100.68 Aligned_cols=106 Identities=13% Similarity=0.120 Sum_probs=70.5
Q ss_pred hHHHhcCCCCCCCCeEEEECCCCcHHHHHHhh--CCCEEEEEecCCCh--hHHHHHHHhC---CCCeeeecc-cCCC-CC
Q 046488 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMRE--FNVTLVSAIINLGA--PFNEMIALRG---LVPLYITIN-QRVP-FF 384 (480)
Q Consensus 314 ~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae--~gV~Vv~vd~d~~~--~~~~~iA~rg---lip~~~~~a-e~LP-Fp 384 (480)
++..++.+.++ .+|||+|||+|.++..|++ .+..+++++++... .+...+...+ .+.+..+++ +.+| ..
T Consensus 62 ~l~~~~~~~~~--~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 139 (232)
T 3ntv_A 62 LIKQLIRMNNV--KNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVN 139 (232)
T ss_dssp HHHHHHHHHTC--CEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHT
T ss_pred HHHHHHhhcCC--CEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhc
Confidence 34444444443 4899999999999999998 46788888865211 1112222233 234555554 3455 55
Q ss_pred CCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 385 DNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 385 d~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
+++||+|++..... . ...++.++.|+|||||++++++
T Consensus 140 ~~~fD~V~~~~~~~---~---~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 140 DKVYDMIFIDAAKA---Q---SKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp TSCEEEEEEETTSS---S---HHHHHHHHGGGEEEEEEEEEEC
T ss_pred cCCccEEEEcCcHH---H---HHHHHHHHHHhcCCCeEEEEee
Confidence 89999999754321 2 2568999999999999999974
No 167
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.94 E-value=2e-09 Score=99.14 Aligned_cols=97 Identities=27% Similarity=0.207 Sum_probs=66.3
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhCC---CEEEEEecCCChhHHH----HHHHhCC--CCeeeecccCCCCC-CC
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREFN---VTLVSAIINLGAPFNE----MIALRGL--VPLYITINQRVPFF-DN 386 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~g---V~Vv~vd~d~~~~~~~----~iA~rgl--ip~~~~~ae~LPFp-d~ 386 (480)
+.+.+.++. +|||+|||+|.++..+++.+ ..+++++++. .+.. .....+. +.+..++.. .+++ ++
T Consensus 71 ~~~~~~~~~--~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~--~~~~~a~~~~~~~~~~~v~~~~~d~~-~~~~~~~ 145 (215)
T 2yxe_A 71 ELLDLKPGM--KVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIP--ELAEKAERTLRKLGYDNVIVIVGDGT-LGYEPLA 145 (215)
T ss_dssp HHTTCCTTC--EEEEECCTTSHHHHHHHHHHCTTSEEEEEESCH--HHHHHHHHHHHHHTCTTEEEEESCGG-GCCGGGC
T ss_pred HhhCCCCCC--EEEEECCCccHHHHHHHHHhCCCCEEEEEeCCH--HHHHHHHHHHHHcCCCCeEEEECCcc-cCCCCCC
Confidence 445555553 89999999999999998864 6888888652 2222 1222232 333344432 2333 78
Q ss_pred ccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 387 TLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 387 SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
+||+|++..+++++. .++.|+|||||++++..
T Consensus 146 ~fD~v~~~~~~~~~~---------~~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 146 PYDRIYTTAAGPKIP---------EPLIRQLKDGGKLLMPV 177 (215)
T ss_dssp CEEEEEESSBBSSCC---------HHHHHTEEEEEEEEEEE
T ss_pred CeeEEEECCchHHHH---------HHHHHHcCCCcEEEEEE
Confidence 999999999887654 47899999999998864
No 168
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.94 E-value=9.9e-10 Score=101.83 Aligned_cols=95 Identities=8% Similarity=0.089 Sum_probs=64.1
Q ss_pred CeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChhHHH----HHHHhCC----CCeeeecccCC-CC-CCCc-cchheec
Q 046488 327 RIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNE----MIALRGL----VPLYITINQRV-PF-FDNT-LDLIHTT 394 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~~~~----~iA~rgl----ip~~~~~ae~L-PF-pd~S-FDlV~ss 394 (480)
.+|||+|||+|.++..++.++. .+++++++. .+.. .+...+. +.+..+++..+ +. ++++ ||+|++.
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~--~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQAKKVTFLELDK--TVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEECSCH--HHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CeEEEcCCccCHHHHHHHHccCCEEEEEECCH--HHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 3899999999999998777764 788887652 2322 2222232 23444554443 32 4788 9999987
Q ss_pred ccccCccChhcHHHHHHHH--HhcccCCcEEEEee
Q 046488 395 RFLDGWIDFVLLDFILYDW--DRVLRPGGLLWIDS 427 (480)
Q Consensus 395 ~vL~h~~d~~~l~~~L~EI--~RVLKPGG~fiI~~ 427 (480)
..++ ... ...++.++ .|+|||||++++..
T Consensus 133 ~~~~-~~~---~~~~l~~~~~~~~LkpgG~l~i~~ 163 (201)
T 2ift_A 133 PPFH-FNL---AEQAISLLCENNWLKPNALIYVET 163 (201)
T ss_dssp CCSS-SCH---HHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CCCC-Ccc---HHHHHHHHHhcCccCCCcEEEEEE
Confidence 6643 222 25688888 78999999998864
No 169
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.94 E-value=1e-09 Score=108.91 Aligned_cols=97 Identities=23% Similarity=0.132 Sum_probs=68.6
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhCCC---EEEEEecCCChhHHH----HHHHhCC--CCeeeecccCCCCCCCc
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREFNV---TLVSAIINLGAPFNE----MIALRGL--VPLYITINQRVPFFDNT 387 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV---~Vv~vd~d~~~~~~~----~iA~rgl--ip~~~~~ae~LPFpd~S 387 (480)
+.+.+.++. +|||+|||+|.++..+++.+. .+++++++. .+.. .++..+. +.+..++....+..+++
T Consensus 69 ~~l~~~~~~--~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~--~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~ 144 (317)
T 1dl5_A 69 EWVGLDKGM--RVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSR--KICEIAKRNVERLGIENVIFVCGDGYYGVPEFSP 144 (317)
T ss_dssp HHTTCCTTC--EEEEECCTTSHHHHHHHHHHCTTCEEEEEESCH--HHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCC
T ss_pred HhcCCCCcC--EEEEecCCchHHHHHHHHhcCCCCEEEEEECCH--HHHHHHHHHHHHcCCCCeEEEECChhhccccCCC
Confidence 455666654 899999999999999988643 488887652 2222 2222232 33445556665556789
Q ss_pred cchheecccccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 388 LDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 388 FDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
||+|++..+++|+. .++.++|||||++++.
T Consensus 145 fD~Iv~~~~~~~~~---------~~~~~~LkpgG~lvi~ 174 (317)
T 1dl5_A 145 YDVIFVTVGVDEVP---------ETWFTQLKEGGRVIVP 174 (317)
T ss_dssp EEEEEECSBBSCCC---------HHHHHHEEEEEEEEEE
T ss_pred eEEEEEcCCHHHHH---------HHHHHhcCCCcEEEEE
Confidence 99999999887654 4678999999999885
No 170
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.93 E-value=7.1e-09 Score=97.06 Aligned_cols=119 Identities=13% Similarity=0.059 Sum_probs=76.4
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHH----HHHHhCC---CCeeeecccCCCCCCCccc
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNE----MIALRGL---VPLYITINQRVPFFDNTLD 389 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~----~iA~rgl---ip~~~~~ae~LPFpd~SFD 389 (480)
..+++.++. +|||+|||+|.++..+++.+..+++++++. .+.. ..+..+. +....++.....+++++||
T Consensus 85 ~~~~~~~~~--~vldiG~G~G~~~~~l~~~~~~v~~vD~~~--~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 160 (248)
T 2yvl_A 85 LKLNLNKEK--RVLEFGTGSGALLAVLSEVAGEVWTFEAVE--EFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFH 160 (248)
T ss_dssp HHTTCCTTC--EEEEECCTTSHHHHHHHHHSSEEEEECSCH--HHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBS
T ss_pred HhcCCCCCC--EEEEeCCCccHHHHHHHHhCCEEEEEecCH--HHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCccc
Confidence 344455553 899999999999999988777888887652 2222 2222232 2233444444433678999
Q ss_pred hheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceee
Q 046488 390 LIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKH 450 (480)
Q Consensus 390 lV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl 450 (480)
+|++. ..++ ..++.++.++|||||++++.... .+.+..+...++.. |..+
T Consensus 161 ~v~~~-----~~~~---~~~l~~~~~~L~~gG~l~~~~~~--~~~~~~~~~~l~~~-f~~~ 210 (248)
T 2yvl_A 161 AAFVD-----VREP---WHYLEKVHKSLMEGAPVGFLLPT--ANQVIKLLESIENY-FGNL 210 (248)
T ss_dssp EEEEC-----SSCG---GGGHHHHHHHBCTTCEEEEEESS--HHHHHHHHHHSTTT-EEEE
T ss_pred EEEEC-----CcCH---HHHHHHHHHHcCCCCEEEEEeCC--HHHHHHHHHHHHhh-CCcc
Confidence 99973 2333 24899999999999999886422 23444555555554 6644
No 171
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.93 E-value=3.4e-10 Score=118.28 Aligned_cols=94 Identities=15% Similarity=0.042 Sum_probs=70.4
Q ss_pred CCeEEEECCC------CcHHHHHHhhC---CCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCC------CCccch
Q 046488 326 IRIGLDFSIG------TGTFAARMREF---NVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFF------DNTLDL 390 (480)
Q Consensus 326 iR~VLDVGCG------tG~fAa~Lae~---gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFp------d~SFDl 390 (480)
..+||||||| ||..+..+++. +..++++|++.. + .+....+.++.++++.+||. +++||+
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~--m---~~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDl 291 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDK--S---HVDELRIRTIQGDQNDAEFLDRIARRYGPFDI 291 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCC--G---GGCBTTEEEEECCTTCHHHHHHHHHHHCCEEE
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHH--H---hhcCCCcEEEEecccccchhhhhhcccCCccE
Confidence 3589999999 77777666653 678899888753 2 11223456677888889998 899999
Q ss_pred heecccccCccChhcHHHHHHHHHhcccCCcEEEEeec
Q 046488 391 IHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 391 V~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
|++.. .+++.+. ..+|.|++|+|||||+|++.++
T Consensus 292 Visdg-sH~~~d~---~~aL~el~rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 292 VIDDG-SHINAHV---RTSFAALFPHVRPGGLYVIEDM 325 (419)
T ss_dssp EEECS-CCCHHHH---HHHHHHHGGGEEEEEEEEEECG
T ss_pred EEECC-cccchhH---HHHHHHHHHhcCCCeEEEEEec
Confidence 99864 3444333 5799999999999999999753
No 172
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.93 E-value=8.3e-10 Score=98.67 Aligned_cols=95 Identities=14% Similarity=0.043 Sum_probs=64.0
Q ss_pred CeEEEECCCCcHHHHHHhhCC-CEEEEEecCCChhHHH----HHHHhCC---CCeeeecccC----CCCCCCccchheec
Q 046488 327 RIGLDFSIGTGTFAARMREFN-VTLVSAIINLGAPFNE----MIALRGL---VPLYITINQR----VPFFDNTLDLIHTT 394 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~g-V~Vv~vd~d~~~~~~~----~iA~rgl---ip~~~~~ae~----LPFpd~SFDlV~ss 394 (480)
.+|||+|||+|.++..+++++ ..+++++++. .+.. .+...+. +.++.+++.. +++.+++||+|++.
T Consensus 46 ~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~--~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~ 123 (187)
T 2fhp_A 46 GMALDLYSGSGGLAIEAVSRGMDKSICIEKNF--AALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLD 123 (187)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEEESCH--HHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCEEEeCCccCHHHHHHHHcCCCEEEEEECCH--HHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEEC
Confidence 489999999999999888875 5788888762 2222 2222232 3344444332 34457899999987
Q ss_pred ccccCccChhcHHHHHHHH--HhcccCCcEEEEee
Q 046488 395 RFLDGWIDFVLLDFILYDW--DRVLRPGGLLWIDS 427 (480)
Q Consensus 395 ~vL~h~~d~~~l~~~L~EI--~RVLKPGG~fiI~~ 427 (480)
..++ .... ..++..+ .|+|||||++++..
T Consensus 124 ~~~~-~~~~---~~~~~~l~~~~~L~~gG~l~~~~ 154 (187)
T 2fhp_A 124 PPYA-KQEI---VSQLEKMLERQLLTNEAVIVCET 154 (187)
T ss_dssp CCGG-GCCH---HHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CCCC-chhH---HHHHHHHHHhcccCCCCEEEEEe
Confidence 6643 2222 3466777 99999999998864
No 173
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.92 E-value=8.5e-10 Score=104.77 Aligned_cols=141 Identities=9% Similarity=0.085 Sum_probs=80.1
Q ss_pred hhHHHhcCCCCC---CCCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHH----HHHHhCC---CCeeeecccC
Q 046488 313 FLIPEVLDIKPG---EIRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNE----MIALRGL---VPLYITINQR 380 (480)
Q Consensus 313 ~~I~~vL~l~~g---~iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~----~iA~rgl---ip~~~~~ae~ 380 (480)
.++..++...+. ...+|||+|||+|.++..++++ +..+++++++. .+.. .+...+. +.++.++++.
T Consensus 50 ~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~--~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 127 (254)
T 2h00_A 50 HWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDD--MCFNYAKKNVEQNNLSDLIKVVKVPQKT 127 (254)
T ss_dssp HHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCH--HHHHHHHHHHHHTTCTTTEEEEECCTTC
T ss_pred HHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCH--HHHHHHHHHHHHcCCCccEEEEEcchhh
Confidence 355556653321 2358999999999999988875 67888888753 2222 2222232 3344555443
Q ss_pred C---CCC---CCccchheecccccCcc-C-----------hhcHHHHHHHHHhcccCCcEEEEee--------------c
Q 046488 381 V---PFF---DNTLDLIHTTRFLDGWI-D-----------FVLLDFILYDWDRVLRPGGLLWIDS--------------F 428 (480)
Q Consensus 381 L---PFp---d~SFDlV~ss~vL~h~~-d-----------~~~l~~~L~EI~RVLKPGG~fiI~~--------------f 428 (480)
. +++ +++||+|++.-.+++.. + ......++.+++|+|||||.+.+.. +
T Consensus 128 ~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g~ 207 (254)
T 2h00_A 128 LLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRW 207 (254)
T ss_dssp SSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBSC
T ss_pred hhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceEE
Confidence 2 455 37999999974433221 0 0001245778889999988765531 0
Q ss_pred c----CChhhHHHHHHHHHHcCceeeEEEEe
Q 046488 429 F----CAKEDMNDYLEVFKMLKYKKHKWVVV 455 (480)
Q Consensus 429 ~----~~~edL~~~~~~l~~lGfkkl~W~~~ 455 (480)
. .....++.+.++++..||+.+.....
T Consensus 208 ~~~~~~~~~~~~~~~~~l~~~Gf~~v~~~~~ 238 (254)
T 2h00_A 208 YSCMLGKKCSLAPLKEELRIQGVPKVTYTEF 238 (254)
T ss_dssp EEEEESSTTSHHHHHHHHHHTTCSEEEEEEE
T ss_pred EEECCCChhHHHHHHHHHHHcCCCceEEEEE
Confidence 0 11122356778899999988765543
No 174
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.91 E-value=8.7e-10 Score=98.56 Aligned_cols=96 Identities=14% Similarity=0.082 Sum_probs=63.4
Q ss_pred CeEEEECCCCcHHHHHHhhCC-CEEEEEecCCChhHHHH----HHHhCC---CCeeeecccC-CCCCCCccchheecccc
Q 046488 327 RIGLDFSIGTGTFAARMREFN-VTLVSAIINLGAPFNEM----IALRGL---VPLYITINQR-VPFFDNTLDLIHTTRFL 397 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~g-V~Vv~vd~d~~~~~~~~----iA~rgl---ip~~~~~ae~-LPFpd~SFDlV~ss~vL 397 (480)
.+|||+|||+|.++..+++++ ..+++++++. .+... +...+. +.+..+++.. ++..+++||+|++...+
T Consensus 33 ~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~--~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~ 110 (177)
T 2esr_A 33 GRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNR--KAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPY 110 (177)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCCEEEEECCCH--HHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSS
T ss_pred CeEEEeCCCCCHHHHHHHHcCCCEEEEEECCH--HHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCC
Confidence 489999999999999999885 4788887652 22221 111221 2334444333 55566789999987554
Q ss_pred cCccChhcHHHHHHHHH--hcccCCcEEEEeec
Q 046488 398 DGWIDFVLLDFILYDWD--RVLRPGGLLWIDSF 428 (480)
Q Consensus 398 ~h~~d~~~l~~~L~EI~--RVLKPGG~fiI~~f 428 (480)
+. .. ...++..+. |+|||||++++...
T Consensus 111 ~~-~~---~~~~~~~l~~~~~L~~gG~l~~~~~ 139 (177)
T 2esr_A 111 AK-ET---IVATIEALAAKNLLSEQVMVVCETD 139 (177)
T ss_dssp HH-HH---HHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred Cc-ch---HHHHHHHHHhCCCcCCCcEEEEEEC
Confidence 21 11 244667776 99999999998643
No 175
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.91 E-value=2.4e-09 Score=99.23 Aligned_cols=107 Identities=21% Similarity=0.196 Sum_probs=68.7
Q ss_pred hHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC---CCEEEEEecCCCh--hHHHHHHHhCC---CCeeeecc-cCCCCC
Q 046488 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMREF---NVTLVSAIINLGA--PFNEMIALRGL---VPLYITIN-QRVPFF 384 (480)
Q Consensus 314 ~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~--~~~~~iA~rgl---ip~~~~~a-e~LPFp 384 (480)
++..++...++ .+|||+|||+|.++..+++. +..+++++++... .+...+...+. +.+..+++ +.++..
T Consensus 55 ~l~~l~~~~~~--~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 132 (225)
T 3tr6_A 55 LLALLVKLMQA--KKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAEL 132 (225)
T ss_dssp HHHHHHHHHTC--SEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHH
T ss_pred HHHHHHHhhCC--CEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHh
Confidence 44444444444 38999999999999999986 6788888875211 11122222332 33444443 333322
Q ss_pred C-----CccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeec
Q 046488 385 D-----NTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 385 d-----~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
. ++||+|++... .. ....++.++.|+|||||++++.+.
T Consensus 133 ~~~~~~~~fD~v~~~~~----~~--~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 133 IHAGQAWQYDLIYIDAD----KA--NTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp HTTTCTTCEEEEEECSC----GG--GHHHHHHHHHHHEEEEEEEEEECS
T ss_pred hhccCCCCccEEEECCC----HH--HHHHHHHHHHHhcCCCcEEEEeCC
Confidence 2 89999996442 11 125689999999999999999753
No 176
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.90 E-value=8.6e-10 Score=105.47 Aligned_cols=123 Identities=11% Similarity=0.016 Sum_probs=77.4
Q ss_pred hHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC------CCEEEEEecCCChhHHHHHHHhCCCCeeeecccC---CCCC
Q 046488 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMREF------NVTLVSAIINLGAPFNEMIALRGLVPLYITINQR---VPFF 384 (480)
Q Consensus 314 ~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~------gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~---LPFp 384 (480)
.+.+++...++ .+|||||||+|..+..|++. +..+++++++...-...+ .....+.++.+++.. +++.
T Consensus 72 ~l~~~l~~~~~--~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~-~~~~~v~~~~gD~~~~~~l~~~ 148 (236)
T 2bm8_A 72 VYHDMLWELRP--RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA-SDMENITLHQGDCSDLTTFEHL 148 (236)
T ss_dssp HHHHHHHHHCC--SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG-GGCTTEEEEECCSSCSGGGGGG
T ss_pred HHHHHHHhcCC--CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh-ccCCceEEEECcchhHHHHHhh
Confidence 34445543333 48999999999999999875 678888887642111000 111235556666655 4665
Q ss_pred CC-ccchheecccccCccChhcHHHHHHHHHh-cccCCcEEEEeeccC--ChhhHHHHHHHHHHc
Q 046488 385 DN-TLDLIHTTRFLDGWIDFVLLDFILYDWDR-VLRPGGLLWIDSFFC--AKEDMNDYLEVFKML 445 (480)
Q Consensus 385 d~-SFDlV~ss~vL~h~~d~~~l~~~L~EI~R-VLKPGG~fiI~~f~~--~~edL~~~~~~l~~l 445 (480)
++ +||+|++... |. + ...++.++.| +|||||++++.++.. .....+.+.++++..
T Consensus 149 ~~~~fD~I~~d~~--~~-~---~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~ 207 (236)
T 2bm8_A 149 REMAHPLIFIDNA--HA-N---TFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAF 207 (236)
T ss_dssp SSSCSSEEEEESS--CS-S---HHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTT
T ss_pred ccCCCCEEEECCc--hH-h---HHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhC
Confidence 54 7999997654 31 2 2568999998 999999999975311 011112455666665
No 177
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.89 E-value=9.2e-10 Score=96.78 Aligned_cols=95 Identities=12% Similarity=0.033 Sum_probs=63.3
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHH----HHHHhC-CCCeeeecccC-CCC---CCCccchheecccc
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNE----MIALRG-LVPLYITINQR-VPF---FDNTLDLIHTTRFL 397 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~----~iA~rg-lip~~~~~ae~-LPF---pd~SFDlV~ss~vL 397 (480)
.+|||+|||+|.++..+++++..+++++++. .+.. .+...+ .+.+..+++.. ++. .+++||+|++...+
T Consensus 43 ~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~--~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~ 120 (171)
T 1ws6_A 43 GRFLDPFAGSGAVGLEAASEGWEAVLVEKDP--EAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPY 120 (171)
T ss_dssp CEEEEETCSSCHHHHHHHHTTCEEEEECCCH--HHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCT
T ss_pred CeEEEeCCCcCHHHHHHHHCCCeEEEEeCCH--HHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCCC
Confidence 4899999999999999999888888887652 2222 222233 23444444333 332 23489999998765
Q ss_pred cCccChhcHHHHHHHHH--hcccCCcEEEEeec
Q 046488 398 DGWIDFVLLDFILYDWD--RVLRPGGLLWIDSF 428 (480)
Q Consensus 398 ~h~~d~~~l~~~L~EI~--RVLKPGG~fiI~~f 428 (480)
+ ... ..++.++. |+|||||++++...
T Consensus 121 ~--~~~---~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 121 A--MDL---AALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp T--SCT---THHHHHHHHHTCEEEEEEEEEEEE
T ss_pred c--hhH---HHHHHHHHhhcccCCCcEEEEEeC
Confidence 4 222 23666666 99999999988653
No 178
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.89 E-value=7.1e-09 Score=101.29 Aligned_cols=119 Identities=7% Similarity=-0.009 Sum_probs=74.8
Q ss_pred CeEEEECCCCcHHHHHHhhCCC-EEEEEec-CCChhHHHHH---H------HhC-------CCCeee-eccc---CCCC-
Q 046488 327 RIGLDFSIGTGTFAARMREFNV-TLVSAII-NLGAPFNEMI---A------LRG-------LVPLYI-TINQ---RVPF- 383 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~-d~~~~~~~~i---A------~rg-------lip~~~-~~ae---~LPF- 383 (480)
.+|||+|||+|.++..++..|. .++++++ +. .+...+ + ..+ .+.+.. .+.. .++.
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~--~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 158 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAGADQVVATDYPDP--EILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRC 158 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTTCSEEEEEECSCH--HHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHH
T ss_pred CeEEEecccccHHHHHHHHcCCCEEEEEeCCCH--HHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhh
Confidence 4899999999999999998876 7888887 42 222211 1 111 122221 1221 1211
Q ss_pred -CCCccchheecccccCccChhcHHHHHHHHHhccc---C--CcEEEEe-eccCC--hhhHHHHHHHHHHcC-ceee
Q 046488 384 -FDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLR---P--GGLLWID-SFFCA--KEDMNDYLEVFKMLK-YKKH 450 (480)
Q Consensus 384 -pd~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLK---P--GG~fiI~-~f~~~--~edL~~~~~~l~~lG-fkkl 450 (480)
++++||+|+++.+++|..+. ..++.++.|+|| | ||.+++. ..... .+....+.+.++..| |+..
T Consensus 159 ~~~~~fD~Ii~~dvl~~~~~~---~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~~~~~~~~~~~l~~~G~f~v~ 232 (281)
T 3bzb_A 159 TGLQRFQVVLLADLLSFHQAH---DALLRSVKMLLALPANDPTAVALVTFTHHRPHLAERDLAFFRLVNADGALIAE 232 (281)
T ss_dssp HSCSSBSEEEEESCCSCGGGH---HHHHHHHHHHBCCTTTCTTCEEEEEECC--------CTHHHHHHHHSTTEEEE
T ss_pred ccCCCCCEEEEeCcccChHHH---HHHHHHHHHHhcccCCCCCCEEEEEEEeeecccchhHHHHHHHHHhcCCEEEE
Confidence 46899999999988775544 569999999999 9 9987664 11111 111234566788889 8654
No 179
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.89 E-value=2.5e-09 Score=109.64 Aligned_cols=100 Identities=11% Similarity=-0.017 Sum_probs=67.3
Q ss_pred CeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChh--HHHHHHHhCC-----CCeeeecccCCCCCCCccchheecccc
Q 046488 327 RIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAP--FNEMIALRGL-----VPLYITINQRVPFFDNTLDLIHTTRFL 397 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~--~~~~iA~rgl-----ip~~~~~ae~LPFpd~SFDlV~ss~vL 397 (480)
.+|||+|||+|.++..++++ +..+++++++.... +...+...+. +.+..+++.. ++++++||+|++.-.+
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~nppf 302 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCNPPF 302 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEECCCC
T ss_pred CeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEECCCc
Confidence 58999999999999999987 67888888763111 1112222231 2224454444 6778999999998777
Q ss_pred cCc--cChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 398 DGW--IDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 398 ~h~--~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
++. ........++.++.|+|||||.+++..
T Consensus 303 h~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 303 HQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp -------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 642 222222468999999999999999864
No 180
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.89 E-value=1.3e-08 Score=101.74 Aligned_cols=132 Identities=15% Similarity=0.092 Sum_probs=85.4
Q ss_pred CCCCCCCCeEEEECC------CCcHHHHHHhhC---CCEEEEEecCCChhHHHHHHHhCCCCe-eeecccCCCCCCCccc
Q 046488 320 DIKPGEIRIGLDFSI------GTGTFAARMREF---NVTLVSAIINLGAPFNEMIALRGLVPL-YITINQRVPFFDNTLD 389 (480)
Q Consensus 320 ~l~~g~iR~VLDVGC------GtG~fAa~Lae~---gV~Vv~vd~d~~~~~~~~iA~rglip~-~~~~ae~LPFpd~SFD 389 (480)
.++++ .+|||+|| |+|+ ..++++ +..++++|++.. + ..+.+ +.+++..++++ ++||
T Consensus 60 ~l~~g--~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~------v---~~v~~~i~gD~~~~~~~-~~fD 125 (290)
T 2xyq_A 60 AVPYN--MRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF------V---SDADSTLIGDCATVHTA-NKWD 125 (290)
T ss_dssp CCCTT--CEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC------B---CSSSEEEESCGGGCCCS-SCEE
T ss_pred CCCCC--CEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC------C---CCCEEEEECccccCCcc-Cccc
Confidence 35555 38999999 4476 333332 468889887643 1 24667 77887777765 7899
Q ss_pred hheecccccC---c-----cChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEEEEeeccCCC
Q 046488 390 LIHTTRFLDG---W-----IDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKWVVVPKRDKD 461 (480)
Q Consensus 390 lV~ss~vL~h---~-----~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W~~~~k~d~~ 461 (480)
+|++...... + .....+..++.++.|+|||||+|++..+..... +.+.+.++..||..+... ..+. .
T Consensus 126 ~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~~--~~l~~~l~~~GF~~v~~~-asr~--~ 200 (290)
T 2xyq_A 126 LIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWN--ADLYKLMGHFSWWTAFVT-NVNA--S 200 (290)
T ss_dssp EEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCC--HHHHHHHTTEEEEEEEEE-GGGT--T
T ss_pred EEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCCH--HHHHHHHHHcCCcEEEEE-EcCC--C
Confidence 9998643211 1 011223468999999999999999976654332 356678888888876654 2222 2
Q ss_pred CcceeEEEE
Q 046488 462 DREVFFSAV 470 (480)
Q Consensus 462 ~~E~~lsav 470 (480)
..|.|+.+.
T Consensus 201 s~e~~lv~~ 209 (290)
T 2xyq_A 201 SSEAFLIGA 209 (290)
T ss_dssp SSCEEEEEE
T ss_pred chheEEecC
Confidence 367776544
No 181
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.88 E-value=7.8e-09 Score=102.89 Aligned_cols=113 Identities=14% Similarity=0.150 Sum_probs=69.0
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhC-C--CEEEEEecCCChhHHH----HHHHh-------------CCCCeeee
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREF-N--VTLVSAIINLGAPFNE----MIALR-------------GLVPLYIT 376 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~-g--V~Vv~vd~d~~~~~~~----~iA~r-------------glip~~~~ 376 (480)
..+.+.++. +|||+|||+|.++..+++. | ..+++++++. .+.. .++.. ..+.+..+
T Consensus 99 ~~l~~~~g~--~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~--~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~ 174 (336)
T 2b25_A 99 SMMDINPGD--TVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRK--DHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK 174 (336)
T ss_dssp HHHTCCTTC--EEEEECCTTSHHHHHHHHHHCTTCEEEEEESSH--HHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES
T ss_pred HhcCCCCCC--EEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCH--HHHHHHHHHHHHhhcccccccccccCCceEEEEC
Confidence 445666664 8999999999999999886 4 6788888652 2222 22211 12344555
Q ss_pred cccCC--CCCCCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHH
Q 046488 377 INQRV--PFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFK 443 (480)
Q Consensus 377 ~ae~L--PFpd~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~ 443 (480)
++..+ ++++++||+|++.. .++. .++.++.|+|||||++++... ..+++..+.+.++
T Consensus 175 d~~~~~~~~~~~~fD~V~~~~-----~~~~---~~l~~~~~~LkpgG~lv~~~~--~~~~~~~~~~~l~ 233 (336)
T 2b25_A 175 DISGATEDIKSLTFDAVALDM-----LNPH---VTLPVFYPHLKHGGVCAVYVV--NITQVIELLDGIR 233 (336)
T ss_dssp CTTCCC-------EEEEEECS-----SSTT---TTHHHHGGGEEEEEEEEEEES--SHHHHHHHHHHHH
T ss_pred ChHHcccccCCCCeeEEEECC-----CCHH---HHHHHHHHhcCCCcEEEEEeC--CHHHHHHHHHHHH
Confidence 55554 67788999999743 2222 279999999999999987533 2334444444444
No 182
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.87 E-value=2.2e-09 Score=99.74 Aligned_cols=94 Identities=17% Similarity=0.155 Sum_probs=65.6
Q ss_pred CCCCCCCeEEEECCCCcHHHHHHhhC-C--CEEEEEecCCChhHHH----HHHHhC-------CCCeeeecccCCCCCCC
Q 046488 321 IKPGEIRIGLDFSIGTGTFAARMREF-N--VTLVSAIINLGAPFNE----MIALRG-------LVPLYITINQRVPFFDN 386 (480)
Q Consensus 321 l~~g~iR~VLDVGCGtG~fAa~Lae~-g--V~Vv~vd~d~~~~~~~----~iA~rg-------lip~~~~~ae~LPFpd~ 386 (480)
+.++ .+|||+|||+|.++..+++. + ..+++++++. .+.. .+...+ .+.+..++....+..++
T Consensus 75 ~~~~--~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~--~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 150 (226)
T 1i1n_A 75 LHEG--AKALDVGSGSGILTACFARMVGCTGKVIGIDHIK--ELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEA 150 (226)
T ss_dssp SCTT--CEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCH--HHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGC
T ss_pred CCCC--CEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCH--HHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCC
Confidence 4444 48999999999999999876 3 5788887652 2222 222212 23444555555666688
Q ss_pred ccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 387 TLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 387 SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
+||+|++...+.+ ++.++.|+|||||++++..
T Consensus 151 ~fD~i~~~~~~~~---------~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 151 PYDAIHVGAAAPV---------VPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp CEEEEEECSBBSS---------CCHHHHHTEEEEEEEEEEE
T ss_pred CcCEEEECCchHH---------HHHHHHHhcCCCcEEEEEE
Confidence 9999998877643 3568899999999998863
No 183
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.87 E-value=1.6e-08 Score=105.63 Aligned_cols=157 Identities=20% Similarity=0.256 Sum_probs=94.7
Q ss_pred hhhHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC--C-CEEEEEecCCChhHHH----HHHHhCC--CCeeeecccCCC
Q 046488 312 DFLIPEVLDIKPGEIRIGLDFSIGTGTFAARMREF--N-VTLVSAIINLGAPFNE----MIALRGL--VPLYITINQRVP 382 (480)
Q Consensus 312 d~~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~--g-V~Vv~vd~d~~~~~~~----~iA~rgl--ip~~~~~ae~LP 382 (480)
..++..+++..++. +|||+|||+|..+..+++. + ..+++++++. .+.. .+...|. +.+..+++..++
T Consensus 248 s~l~~~~l~~~~g~--~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~--~~l~~~~~~~~~~g~~~v~~~~~D~~~~~ 323 (450)
T 2yxl_A 248 SAVASIVLDPKPGE--TVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDK--MRMKRLKDFVKRMGIKIVKPLVKDARKAP 323 (450)
T ss_dssp HHHHHHHHCCCTTC--EEEESSCTTCHHHHHHHHHTTTCSEEEEECSCH--HHHHHHHHHHHHTTCCSEEEECSCTTCCS
T ss_pred hHHHHHhcCCCCcC--EEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCH--HHHHHHHHHHHHcCCCcEEEEEcChhhcc
Confidence 34555677777664 8999999999999999874 3 5788877652 2222 2222233 223345556665
Q ss_pred --CCCCccchhee------cccccCccCh------hcH-------HHHHHHHHhcccCCcEEEEeeccCCh-hhHHHHHH
Q 046488 383 --FFDNTLDLIHT------TRFLDGWIDF------VLL-------DFILYDWDRVLRPGGLLWIDSFFCAK-EDMNDYLE 440 (480)
Q Consensus 383 --Fpd~SFDlV~s------s~vL~h~~d~------~~l-------~~~L~EI~RVLKPGG~fiI~~f~~~~-edL~~~~~ 440 (480)
+++++||+|++ ..++.+.++. ..+ ..++.++.++|||||+++++...-.. +..+.+..
T Consensus 324 ~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~ 403 (450)
T 2yxl_A 324 EIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRW 403 (450)
T ss_dssp SSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHH
T ss_pred hhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHH
Confidence 66689999995 2233322221 111 45899999999999999987543322 23334455
Q ss_pred HHHHc-CceeeE-------------EEEeeccCCCCcceeEEEEEEeC
Q 046488 441 VFKML-KYKKHK-------------WVVVPKRDKDDREVFFSAVLEKP 474 (480)
Q Consensus 441 ~l~~l-Gfkkl~-------------W~~~~k~d~~~~E~~lsav~qKP 474 (480)
+++.. +|+... ..+.+.. ...+.|+.|+++|.
T Consensus 404 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~--~~~dGff~a~l~k~ 449 (450)
T 2yxl_A 404 FLNVHPEFKLVPLKSPYDPGFLEGTMRAWPHR--HSTIGFFYALLEKS 449 (450)
T ss_dssp HHHHCSSCEECCCCSSSEECSSTTCEEECHHH--HSSCCEEEEEEECC
T ss_pred HHHhCCCCEEeecccccccccCCCeEEECCCC--CCCCceEEEEEEEC
Confidence 66664 565332 1111111 23578899999883
No 184
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.87 E-value=2.7e-08 Score=103.08 Aligned_cols=159 Identities=16% Similarity=0.086 Sum_probs=95.2
Q ss_pred hhhHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhCC--CEEEEEecCCChh--HHHHHHHhCC-CCeeeecccCCC--CC
Q 046488 312 DFLIPEVLDIKPGEIRIGLDFSIGTGTFAARMREFN--VTLVSAIINLGAP--FNEMIALRGL-VPLYITINQRVP--FF 384 (480)
Q Consensus 312 d~~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~g--V~Vv~vd~d~~~~--~~~~iA~rgl-ip~~~~~ae~LP--Fp 384 (480)
...+..+++..++. +|||+|||+|..+..+++.. ..+++++++...- ....+...|. +.+..+++..++ ++
T Consensus 235 s~~~~~~l~~~~g~--~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~ 312 (429)
T 1sqg_A 235 AQGCMTWLAPQNGE--HILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCG 312 (429)
T ss_dssp HHTHHHHHCCCTTC--EEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHT
T ss_pred HHHHHHHcCCCCcC--eEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcc
Confidence 33455677766664 89999999999999999863 5788888764321 2222222232 333445566665 66
Q ss_pred CCccchheec------ccccCccCh------hcH-------HHHHHHHHhcccCCcEEEEeeccCC-hhhHHHHHHHHHH
Q 046488 385 DNTLDLIHTT------RFLDGWIDF------VLL-------DFILYDWDRVLRPGGLLWIDSFFCA-KEDMNDYLEVFKM 444 (480)
Q Consensus 385 d~SFDlV~ss------~vL~h~~d~------~~l-------~~~L~EI~RVLKPGG~fiI~~f~~~-~edL~~~~~~l~~ 444 (480)
+++||+|++. .++.+.++. ..+ ..++.++.++|||||+++++...-. .+..+.+...++.
T Consensus 313 ~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~ 392 (429)
T 1sqg_A 313 EQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQR 392 (429)
T ss_dssp TCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHh
Confidence 7899999852 233322221 001 3689999999999999998753222 2223334455555
Q ss_pred c-CceeeE--------EEEeeccCCCCcceeEEEEEEeC
Q 046488 445 L-KYKKHK--------WVVVPKRDKDDREVFFSAVLEKP 474 (480)
Q Consensus 445 l-Gfkkl~--------W~~~~k~d~~~~E~~lsav~qKP 474 (480)
. +|+.+. +...+.. ...+.|+.|+++|.
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~P~~--~~~dGff~a~l~k~ 429 (429)
T 1sqg_A 393 TADAELCETGTPEQPGKQNLPGA--EEGDGFFYAKLIKK 429 (429)
T ss_dssp CTTCEECSSBCSSSBSEEECCCT--TSCCSEEEEEEEC-
T ss_pred CCCCEEeCCCCCCCCeEEECCCC--CCCCceEEEEEEEC
Confidence 3 354322 2222322 23577999999984
No 185
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.87 E-value=1.6e-09 Score=101.48 Aligned_cols=105 Identities=19% Similarity=0.206 Sum_probs=70.7
Q ss_pred hHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHH----HHHHhCC---CCeeeecccC-CCC
Q 046488 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNE----MIALRGL---VPLYITINQR-VPF 383 (480)
Q Consensus 314 ~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~----~iA~rgl---ip~~~~~ae~-LPF 383 (480)
++..++...++ .+|||+|||+|.++..+++. +..+++++++. .+.. .+...+. +.+..+++.. +|.
T Consensus 45 ~l~~~~~~~~~--~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~--~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 120 (233)
T 2gpy_A 45 SLLHLLKMAAP--ARILEIGTAIGYSAIRMAQALPEATIVSIERDE--RRYEEAHKHVKALGLESRIELLFGDALQLGEK 120 (233)
T ss_dssp HHHHHHHHHCC--SEEEEECCTTSHHHHHHHHHCTTCEEEEECCCH--HHHHHHHHHHHHTTCTTTEEEECSCGGGSHHH
T ss_pred HHHHHHhccCC--CEEEEecCCCcHHHHHHHHHCCCCEEEEEECCH--HHHHHHHHHHHHcCCCCcEEEEECCHHHHHHh
Confidence 44455554444 48999999999999999986 57888887652 2222 2222232 3334444333 354
Q ss_pred C--CCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeec
Q 046488 384 F--DNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 384 p--d~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
. +++||+|++..... + ...++.++.++|||||++++.++
T Consensus 121 ~~~~~~fD~I~~~~~~~---~---~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 121 LELYPLFDVLFIDAAKG---Q---YRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp HTTSCCEEEEEEEGGGS---C---HHHHHHHHGGGEEEEEEEEEETT
T ss_pred cccCCCccEEEECCCHH---H---HHHHHHHHHHHcCCCeEEEEEcC
Confidence 4 68999999876543 2 25689999999999999999754
No 186
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.85 E-value=2.6e-09 Score=100.66 Aligned_cols=97 Identities=23% Similarity=0.178 Sum_probs=65.9
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhCC-CEEEEEecCCChhHHH----HHHHhCC--CCeeeecccCCCCCCCc-c
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREFN-VTLVSAIINLGAPFNE----MIALRGL--VPLYITINQRVPFFDNT-L 388 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~g-V~Vv~vd~d~~~~~~~----~iA~rgl--ip~~~~~ae~LPFpd~S-F 388 (480)
+.+.+.++. +|||+|||+|.++..+++.+ ..+++++++. .+.. ..+..+. +.+..++. ..+++++. |
T Consensus 85 ~~l~~~~~~--~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~--~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~f 159 (235)
T 1jg1_A 85 EIANLKPGM--NILEVGTGSGWNAALISEIVKTDVYTIERIP--ELVEFAKRNLERAGVKNVHVILGDG-SKGFPPKAPY 159 (235)
T ss_dssp HHHTCCTTC--CEEEECCTTSHHHHHHHHHHCSCEEEEESCH--HHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGCCE
T ss_pred HhcCCCCCC--EEEEEeCCcCHHHHHHHHHhCCEEEEEeCCH--HHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCCCc
Confidence 445565553 79999999999999999874 6788887652 2222 2222232 22333443 45666655 9
Q ss_pred chheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 389 DLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 389 DlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
|+|++..+++++. .++.++|||||++++..
T Consensus 160 D~Ii~~~~~~~~~---------~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 160 DVIIVTAGAPKIP---------EPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp EEEEECSBBSSCC---------HHHHHTEEEEEEEEEEE
T ss_pred cEEEECCcHHHHH---------HHHHHhcCCCcEEEEEE
Confidence 9999988876543 37889999999998863
No 187
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.84 E-value=2.4e-09 Score=107.54 Aligned_cols=99 Identities=16% Similarity=0.193 Sum_probs=66.3
Q ss_pred CeEEEECCCCcHHHHHHhhCC--CEEEEEecCCCh--hHHHHHHHhCC-CCeeeecccCCCCCCCccchheecccccCcc
Q 046488 327 RIGLDFSIGTGTFAARMREFN--VTLVSAIINLGA--PFNEMIALRGL-VPLYITINQRVPFFDNTLDLIHTTRFLDGWI 401 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~g--V~Vv~vd~d~~~--~~~~~iA~rgl-ip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~ 401 (480)
.+|||+|||+|.++..+++++ ..+++++++... .+...+...+. ..+..++. +++.+++||+|+++..+++..
T Consensus 198 ~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~--~~~~~~~fD~Iv~~~~~~~g~ 275 (343)
T 2pjd_A 198 GKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNV--FSEVKGRFDMIISNPPFHDGM 275 (343)
T ss_dssp SBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECST--TTTCCSCEEEEEECCCCCSSS
T ss_pred CeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccc--cccccCCeeEEEECCCcccCc
Confidence 379999999999999998874 467777765211 11112222222 12223333 345588999999998876421
Q ss_pred --ChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 402 --DFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 402 --d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
.......++.++.|+|||||.+++..
T Consensus 276 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 276 QTSLDAAQTLIRGAVRHLNSGGELRIVA 303 (343)
T ss_dssp HHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 12223679999999999999999864
No 188
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.84 E-value=3e-09 Score=98.16 Aligned_cols=92 Identities=16% Similarity=0.042 Sum_probs=63.8
Q ss_pred CeEEEECCCCcHHHHHHhhC---CCEEEEEecCCChhHHH----HHHHhCC---CCeeeecc-cCCCCCCCccchheecc
Q 046488 327 RIGLDFSIGTGTFAARMREF---NVTLVSAIINLGAPFNE----MIALRGL---VPLYITIN-QRVPFFDNTLDLIHTTR 395 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~~~~~----~iA~rgl---ip~~~~~a-e~LPFpd~SFDlV~ss~ 395 (480)
.+|||+|||+|.++..+++. +..+++++++. .+.. .+...+. +.+..+++ +.+|..++ ||+|++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~--~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISISSRVVMIDPDR--DNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCH--HHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCH--HHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 48999999999999999876 56888888652 2222 2222232 33445553 33466567 99999863
Q ss_pred cccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 396 FLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 396 vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
. ..+. ..++.++.|+|||||++++.+
T Consensus 135 ~---~~~~---~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 135 D---VFNG---ADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp T---TSCH---HHHHHHHGGGEEEEEEEEEES
T ss_pred C---hhhh---HHHHHHHHHhcCCCeEEEEEC
Confidence 2 1222 568999999999999999875
No 189
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.83 E-value=3.4e-09 Score=98.32 Aligned_cols=95 Identities=8% Similarity=0.026 Sum_probs=64.7
Q ss_pred CeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChhHHH----HHHHhCC--CCeeeecccC-CCCCCCccchheeccccc
Q 046488 327 RIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNE----MIALRGL--VPLYITINQR-VPFFDNTLDLIHTTRFLD 398 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~~~~----~iA~rgl--ip~~~~~ae~-LPFpd~SFDlV~ss~vL~ 398 (480)
.+|||+|||+|.++..++.++. .+++++.+. .+.. .+...+. +.+..+++.. +++.+++||+|++...++
T Consensus 56 ~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~--~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLEALSRYAAGATLIEMDR--AVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEECSCH--HHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS
T ss_pred CeEEEeCCCcCHHHHHHHhcCCCEEEEEECCH--HHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC
Confidence 4899999999999998877764 788887652 3322 2222232 3344455444 677788999999876543
Q ss_pred CccChhcHHHHHHHHHh--cccCCcEEEEee
Q 046488 399 GWIDFVLLDFILYDWDR--VLRPGGLLWIDS 427 (480)
Q Consensus 399 h~~d~~~l~~~L~EI~R--VLKPGG~fiI~~ 427 (480)
.... ..++.++.+ +|||||++++..
T Consensus 134 -~~~~---~~~l~~l~~~~~L~pgG~l~i~~ 160 (202)
T 2fpo_A 134 -RGLL---EETINLLEDNGWLADEALIYVES 160 (202)
T ss_dssp -TTTH---HHHHHHHHHTTCEEEEEEEEEEE
T ss_pred -CCcH---HHHHHHHHhcCccCCCcEEEEEE
Confidence 2222 457888855 699999998864
No 190
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.83 E-value=3.5e-09 Score=98.49 Aligned_cols=96 Identities=18% Similarity=0.036 Sum_probs=66.1
Q ss_pred CCCCCCCeEEEECCCCcHHHHHHhhCC-------CEEEEEecCCCh--hHHHHHHHhC-------CCCeeeecccCCC--
Q 046488 321 IKPGEIRIGLDFSIGTGTFAARMREFN-------VTLVSAIINLGA--PFNEMIALRG-------LVPLYITINQRVP-- 382 (480)
Q Consensus 321 l~~g~iR~VLDVGCGtG~fAa~Lae~g-------V~Vv~vd~d~~~--~~~~~iA~rg-------lip~~~~~ae~LP-- 382 (480)
+.++ .+|||+|||+|.++..+++.. ..+++++++... .+...++..+ .+.+..++....+
T Consensus 78 ~~~~--~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 155 (227)
T 2pbf_A 78 LKPG--SRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEE 155 (227)
T ss_dssp SCTT--CEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHH
T ss_pred CCCC--CEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccc
Confidence 5555 489999999999999998863 378888865211 1112222223 2344455555554
Q ss_pred --CCCCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 383 --FFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 383 --Fpd~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
+.+++||+|++...+++ ++.++.++|||||++++..
T Consensus 156 ~~~~~~~fD~I~~~~~~~~---------~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 156 EKKELGLFDAIHVGASASE---------LPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp HHHHHCCEEEEEECSBBSS---------CCHHHHHHEEEEEEEEEEE
T ss_pred cCccCCCcCEEEECCchHH---------HHHHHHHhcCCCcEEEEEE
Confidence 56789999999877754 3578899999999998863
No 191
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.81 E-value=9.9e-10 Score=118.02 Aligned_cols=98 Identities=12% Similarity=-0.009 Sum_probs=73.5
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHH---HHHH-hCCC--CeeeecccCC--CCCCCccchheeccccc
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNE---MIAL-RGLV--PLYITINQRV--PFFDNTLDLIHTTRFLD 398 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~---~iA~-rgli--p~~~~~ae~L--PFpd~SFDlV~ss~vL~ 398 (480)
.+|||||||+|.++..|+++|..|+++|+.. .+.. ..|. .+.. ....+.++.+ ++.+++||+|+|+.+|+
T Consensus 68 ~~vLDvGCG~G~~~~~la~~ga~V~giD~~~--~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~e 145 (569)
T 4azs_A 68 LNVLDLGCAQGFFSLSLASKGATIVGIDFQQ--ENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVFH 145 (569)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCHH
T ss_pred CeEEEECCCCcHHHHHHHhCCCEEEEECCCH--HHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcchh
Confidence 4799999999999999999999999998752 2221 1222 3433 3445667777 67889999999999999
Q ss_pred CccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 399 GWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 399 h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
|+.++..+ ..+..+.+.|+++|..++..
T Consensus 146 hv~~~~~~-~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 146 HIVHLHGI-DEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp HHHHHHCH-HHHHHHHHHHHHHSSEEEEE
T ss_pred cCCCHHHH-HHHHHHHHHhccccceeeEE
Confidence 99876542 34566888899998877654
No 192
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.81 E-value=5.2e-09 Score=97.48 Aligned_cols=93 Identities=12% Similarity=0.079 Sum_probs=61.3
Q ss_pred CeEEEECCCCcHHHHHHhhC-C--CEEEEEecCCChhHHHHH---HHh-CCCCeeeecccCC---CCCCCccchheeccc
Q 046488 327 RIGLDFSIGTGTFAARMREF-N--VTLVSAIINLGAPFNEMI---ALR-GLVPLYITINQRV---PFFDNTLDLIHTTRF 396 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~-g--V~Vv~vd~d~~~~~~~~i---A~r-glip~~~~~ae~L---PFpd~SFDlV~ss~v 396 (480)
.+|||+|||+|.++..++++ | ..+++++.+. .+...+ +.+ ..+.+..+++... +..+++||+|++...
T Consensus 75 ~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~--~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~ 152 (227)
T 1g8a_A 75 KSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSP--RVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA 152 (227)
T ss_dssp CEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCH--HHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC
T ss_pred CEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCH--HHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCC
Confidence 48999999999999999876 2 5788887652 222221 211 2334445554442 223468999997543
Q ss_pred ccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 397 LDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 397 L~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
..+. ...++.++.|+|||||++++.
T Consensus 153 ---~~~~--~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 153 ---QPTQ--AKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp ---STTH--HHHHHHHHHHHEEEEEEEEEE
T ss_pred ---CHhH--HHHHHHHHHHhcCCCCEEEEE
Confidence 1222 134599999999999999886
No 193
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.81 E-value=1.7e-08 Score=92.28 Aligned_cols=107 Identities=12% Similarity=0.007 Sum_probs=70.2
Q ss_pred CeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChhHHHHHHHhC--CCCeeeecccCCCCCCCccchheecccccCccCh
Q 046488 327 RIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNEMIALRG--LVPLYITINQRVPFFDNTLDLIHTTRFLDGWIDF 403 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~~~~~iA~rg--lip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d~ 403 (480)
.+|||+|||+|.++..+++.+. .+++++++ +.....+.+. .+.+..+++..+| ++||+|++...++++.+.
T Consensus 53 ~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~---~~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~~ 126 (200)
T 1ne2_A 53 RSVIDAGTGNGILACGSYLLGAESVTAFDID---PDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPPFGSVVKH 126 (200)
T ss_dssp SEEEEETCTTCHHHHHHHHTTBSEEEEEESC---HHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCCC------
T ss_pred CEEEEEeCCccHHHHHHHHcCCCEEEEEECC---HHHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCCchhccCc
Confidence 4899999999999999998865 58888875 2333333333 3556666666665 799999999888777543
Q ss_pred hcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcC
Q 046488 404 VLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLK 446 (480)
Q Consensus 404 ~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lG 446 (480)
.. ..++.++.|+| |+.+++. .......+.+.++..|
T Consensus 127 ~~-~~~l~~~~~~~--g~~~~~~----~~~~~~~~~~~~~~~g 162 (200)
T 1ne2_A 127 SD-RAFIDKAFETS--MWIYSIG----NAKARDFLRREFSARG 162 (200)
T ss_dssp -C-HHHHHHHHHHE--EEEEEEE----EGGGHHHHHHHHHHHE
T ss_pred hh-HHHHHHHHHhc--CcEEEEE----cCchHHHHHHHHHHCC
Confidence 22 46899999999 5544332 2233455566677766
No 194
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.81 E-value=1.1e-08 Score=98.03 Aligned_cols=107 Identities=14% Similarity=0.083 Sum_probs=71.6
Q ss_pred hHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC---CCEEEEEecCC--ChhHHHHHHHhCC---CCeeeecccC-CCCC
Q 046488 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMREF---NVTLVSAIINL--GAPFNEMIALRGL---VPLYITINQR-VPFF 384 (480)
Q Consensus 314 ~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~--~~~~~~~iA~rgl---ip~~~~~ae~-LPFp 384 (480)
++..++.+.++ ++|||||||+|..+..|++. +..+++++++. ...+...+...+. +.+..+++.. ++..
T Consensus 51 ~l~~l~~~~~~--~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~ 128 (242)
T 3r3h_A 51 FMQMLIRLTRA--KKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSL 128 (242)
T ss_dssp HHHHHHHHHTC--SEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHH
T ss_pred HHHHHHhhcCc--CEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHH
Confidence 44444443333 48999999999999999984 56788888753 2234444544443 3445555433 3432
Q ss_pred -----CCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeec
Q 046488 385 -----DNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 385 -----d~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
+++||+|++.... . ....++.++.|+|||||++++++.
T Consensus 129 ~~~~~~~~fD~V~~d~~~----~--~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 129 LNEGGEHQFDFIFIDADK----T--NYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp HHHHCSSCEEEEEEESCG----G--GHHHHHHHHHHHEEEEEEEEEECS
T ss_pred hhccCCCCEeEEEEcCCh----H--HhHHHHHHHHHhcCCCeEEEEECC
Confidence 5899999976431 1 124689999999999999999753
No 195
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.80 E-value=4.3e-09 Score=111.49 Aligned_cols=98 Identities=13% Similarity=0.121 Sum_probs=69.2
Q ss_pred CeEEEECCCCcHHHHHHhhCC-CEEEEEecCCChh-HHHHHHHhCC---CCeeeecccCCCCCCCccchheecccccCcc
Q 046488 327 RIGLDFSIGTGTFAARMREFN-VTLVSAIINLGAP-FNEMIALRGL---VPLYITINQRVPFFDNTLDLIHTTRFLDGWI 401 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~g-V~Vv~vd~d~~~~-~~~~iA~rgl---ip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~ 401 (480)
.+|||||||+|.++..+++.+ ..+++++++.... +...++..+. +.+..++.+.++++ +.||+|++...++++.
T Consensus 160 ~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~~~~~ 238 (480)
T 3b3j_A 160 KIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLF 238 (480)
T ss_dssp CEEEEESCSTTHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCHHHHT
T ss_pred CEEEEecCcccHHHHHHHHcCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCchHhcC
Confidence 489999999999999999875 4788888652101 1112222232 34556667777765 5899999987777775
Q ss_pred ChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 402 DFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 402 d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
.... ...+.++.|+|||||++++.
T Consensus 239 ~e~~-~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 239 NERM-LESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp CHHH-HHHHHHGGGGEEEEEEEESC
T ss_pred cHHH-HHHHHHHHHhcCCCCEEEEE
Confidence 4433 45778999999999999854
No 196
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.80 E-value=2.5e-08 Score=97.03 Aligned_cols=112 Identities=16% Similarity=0.114 Sum_probs=71.1
Q ss_pred hhhHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC--C-CEEEEEecCCChhHHH----HHHHhCC--CCeeeecccCCC
Q 046488 312 DFLIPEVLDIKPGEIRIGLDFSIGTGTFAARMREF--N-VTLVSAIINLGAPFNE----MIALRGL--VPLYITINQRVP 382 (480)
Q Consensus 312 d~~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~--g-V~Vv~vd~d~~~~~~~----~iA~rgl--ip~~~~~ae~LP 382 (480)
..++..+++..++. +|||+|||+|.++..+++. + ..+++++.+. .+.. .+...+. +.+..+++..++
T Consensus 72 s~l~~~~l~~~~g~--~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~--~~l~~~~~~~~~~g~~~v~~~~~D~~~~~ 147 (274)
T 3ajd_A 72 SMIPPIVLNPREDD--FILDMCAAPGGKTTHLAQLMKNKGTIVAVEISK--TRTKALKSNINRMGVLNTIIINADMRKYK 147 (274)
T ss_dssp GGHHHHHHCCCTTC--EEEETTCTTCHHHHHHHHHTTTCSEEEEEESCH--HHHHHHHHHHHHTTCCSEEEEESCHHHHH
T ss_pred HHHHHHHhCCCCcC--EEEEeCCCccHHHHHHHHHcCCCCEEEEECCCH--HHHHHHHHHHHHhCCCcEEEEeCChHhcc
Confidence 33455677776664 8999999999999999873 4 6788888652 2222 2222232 233445555555
Q ss_pred C----CCCccchheecc------cccC---ccC------hhcHHHHHHHHHhcccCCcEEEEee
Q 046488 383 F----FDNTLDLIHTTR------FLDG---WID------FVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 383 F----pd~SFDlV~ss~------vL~h---~~d------~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
. .+++||+|++.- ++.+ |.. ......++.++.++|||||+++++.
T Consensus 148 ~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~st 211 (274)
T 3ajd_A 148 DYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYST 211 (274)
T ss_dssp HHHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 4 377999999751 1110 100 0112568999999999999999875
No 197
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.78 E-value=9e-09 Score=96.26 Aligned_cols=93 Identities=17% Similarity=0.200 Sum_probs=63.8
Q ss_pred CCCCCCCeEEEECCCCcHHHHHHhhC-C-------CEEEEEecCCChhHHH----HHHHh-------CCCCeeeecccCC
Q 046488 321 IKPGEIRIGLDFSIGTGTFAARMREF-N-------VTLVSAIINLGAPFNE----MIALR-------GLVPLYITINQRV 381 (480)
Q Consensus 321 l~~g~iR~VLDVGCGtG~fAa~Lae~-g-------V~Vv~vd~d~~~~~~~----~iA~r-------glip~~~~~ae~L 381 (480)
+.++ .+|||+|||+|.++..+++. + ..+++++++. .+.. .++.. ..+.+..++...
T Consensus 82 ~~~~--~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~--~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~- 156 (227)
T 1r18_A 82 LKPG--ARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQA--ELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK- 156 (227)
T ss_dssp CCTT--CEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCH--HHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-
T ss_pred CCCC--CEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCH--HHHHHHHHHHHhcCccccCCCceEEEECCccc-
Confidence 4444 38999999999999999874 4 3788887652 2222 22221 134444555444
Q ss_pred CCCC-CccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 382 PFFD-NTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 382 PFpd-~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
++++ ++||+|++...++++ +.++.++|||||++++..
T Consensus 157 ~~~~~~~fD~I~~~~~~~~~---------~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 157 GYPPNAPYNAIHVGAAAPDT---------PTELINQLASGGRLIVPV 194 (227)
T ss_dssp CCGGGCSEEEEEECSCBSSC---------CHHHHHTEEEEEEEEEEE
T ss_pred CCCcCCCccEEEECCchHHH---------HHHHHHHhcCCCEEEEEE
Confidence 5555 899999998887653 368899999999998853
No 198
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.78 E-value=8e-09 Score=102.84 Aligned_cols=105 Identities=14% Similarity=-0.022 Sum_probs=67.3
Q ss_pred CCCeEEEECCCC--cHHHHHHhhC---CCEEEEEecCCChhHHHHHHH--hC----CCCeeeecccCC------CCCCCc
Q 046488 325 EIRIGLDFSIGT--GTFAARMREF---NVTLVSAIINLGAPFNEMIAL--RG----LVPLYITINQRV------PFFDNT 387 (480)
Q Consensus 325 ~iR~VLDVGCGt--G~fAa~Lae~---gV~Vv~vd~d~~~~~~~~iA~--rg----lip~~~~~ae~L------PFpd~S 387 (480)
.++.|||||||+ +.+...++.+ +..|+++|.+ ..++..... .+ .+.++.++...+ |..+++
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~s--p~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~ 155 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDND--PIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDT 155 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECC--HHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTT
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCC--hHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccc
Confidence 468999999997 3344444332 6788888754 234332211 11 133445555543 222566
Q ss_pred cc-----hheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCC
Q 046488 388 LD-----LIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCA 431 (480)
Q Consensus 388 FD-----lV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~ 431 (480)
|| .|+++.+|||+.+......++.++.++|+|||+|+++++...
T Consensus 156 ~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 156 LDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp CCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred cCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 77 477888888877754335799999999999999999876543
No 199
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.78 E-value=1.4e-08 Score=104.88 Aligned_cols=99 Identities=19% Similarity=0.180 Sum_probs=68.6
Q ss_pred CeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChhHHHHHHH-hCC---CCeeeecccCCCCCCCccchheecccccCcc
Q 046488 327 RIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNEMIAL-RGL---VPLYITINQRVPFFDNTLDLIHTTRFLDGWI 401 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~~~~~iA~-rgl---ip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~ 401 (480)
++|||||||||.++..+++.|. .|++++.+.......++++ .+. +.++.+..+.+.++ +.||+|+|-..-..+.
T Consensus 85 k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~~l~ 163 (376)
T 4hc4_A 85 KTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGYGLL 163 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBTTBT
T ss_pred CEEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeeccccccc
Confidence 4899999999999998888875 6888886643333333333 333 34556667888776 6799999843322222
Q ss_pred ChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 402 DFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 402 d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
....+..++...+|.|||||.++-.
T Consensus 164 ~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 164 HESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp TTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred ccchhhhHHHHHHhhCCCCceECCc
Confidence 2233567899999999999998753
No 200
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.78 E-value=2.1e-07 Score=84.97 Aligned_cols=112 Identities=8% Similarity=0.022 Sum_probs=74.1
Q ss_pred CeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChhHHHHHHHh-----C-CCCeeeecccCCCCCCCccchheecccccC
Q 046488 327 RIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNEMIALR-----G-LVPLYITINQRVPFFDNTLDLIHTTRFLDG 399 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~~~~~iA~r-----g-lip~~~~~ae~LPFpd~SFDlV~ss~vL~h 399 (480)
.+|||+|||+|.++..+++.+. .+++++++. .+.. .+.+ + .+.+..+++..+| ++||+|++.-.++.
T Consensus 51 ~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~--~~~~-~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~ 124 (207)
T 1wy7_A 51 KVVADLGAGTGVLSYGALLLGAKEVICVEVDK--EAVD-VLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFGS 124 (207)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCSEEEEEESCH--HHHH-HHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCSS
T ss_pred CEEEEeeCCCCHHHHHHHHcCCCEEEEEECCH--HHHH-HHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCcc
Confidence 4899999999999999998865 588888652 2322 2222 2 2334455566654 58999999877665
Q ss_pred ccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCcee
Q 046488 400 WIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKK 449 (480)
Q Consensus 400 ~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkk 449 (480)
+..... ..++.++.++| ||.+++ . ....+..+.+...++..||+-
T Consensus 125 ~~~~~~-~~~l~~~~~~l--~~~~~~-~-~~~~~~~~~~~~~l~~~g~~~ 169 (207)
T 1wy7_A 125 QRKHAD-RPFLLKAFEIS--DVVYSI-H-LAKPEVRRFIEKFSWEHGFVV 169 (207)
T ss_dssp SSTTTT-HHHHHHHHHHC--SEEEEE-E-ECCHHHHHHHHHHHHHTTEEE
T ss_pred ccCCch-HHHHHHHHHhc--CcEEEE-E-eCCcCCHHHHHHHHHHCCCeE
Confidence 543222 56899999999 554433 2 123344455667788889864
No 201
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.78 E-value=1.2e-08 Score=107.30 Aligned_cols=107 Identities=16% Similarity=0.052 Sum_probs=67.6
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhC-C-CEEEEEecCCCh--hH-------HHHHHHhC----CCCeeeeccc--
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREF-N-VTLVSAIINLGA--PF-------NEMIALRG----LVPLYITINQ-- 379 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~-g-V~Vv~vd~d~~~--~~-------~~~iA~rg----lip~~~~~ae-- 379 (480)
+.+.+.++ .+|||+|||+|.++..+++. + ..+++++++... .+ ...+...| .+.+..+...
T Consensus 236 ~~l~l~~g--~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~ 313 (433)
T 1u2z_A 236 QQCQLKKG--DTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVD 313 (433)
T ss_dssp HHTTCCTT--CEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTT
T ss_pred HhcCCCCC--CEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccc
Confidence 34455555 48999999999999999985 4 468888865311 11 11122223 1222333221
Q ss_pred CCCC--CCCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeecc
Q 046488 380 RVPF--FDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFF 429 (480)
Q Consensus 380 ~LPF--pd~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~ 429 (480)
..+| .+++||+|+++.++ +..+ +..+|.|+.|+|||||++++...+
T Consensus 314 ~~~~~~~~~~FDvIvvn~~l-~~~d---~~~~L~el~r~LKpGG~lVi~d~f 361 (433)
T 1u2z_A 314 NNRVAELIPQCDVILVNNFL-FDED---LNKKVEKILQTAKVGCKIISLKSL 361 (433)
T ss_dssp CHHHHHHGGGCSEEEECCTT-CCHH---HHHHHHHHHTTCCTTCEEEESSCS
T ss_pred ccccccccCCCCEEEEeCcc-cccc---HHHHHHHHHHhCCCCeEEEEeecc
Confidence 1123 35799999987655 2222 256899999999999999987533
No 202
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.77 E-value=1e-08 Score=97.61 Aligned_cols=97 Identities=15% Similarity=0.222 Sum_probs=63.3
Q ss_pred CeEEEECCCCcHHHHHHhhCC--CEEEEEecCCChhHHH----HHHHh--------CC--CCeeeecccC-CC--CCCCc
Q 046488 327 RIGLDFSIGTGTFAARMREFN--VTLVSAIINLGAPFNE----MIALR--------GL--VPLYITINQR-VP--FFDNT 387 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~g--V~Vv~vd~d~~~~~~~----~iA~r--------gl--ip~~~~~ae~-LP--Fpd~S 387 (480)
.+|||||||+|.++..+++.+ ..+++++++. .+.. .+... +. +.++.+++.. ++ |++++
T Consensus 51 ~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~--~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSPAFPEDLILGMEIRV--QVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp EEEEEETCTTSHHHHHHHHHSTTSEEEEEESCH--HHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCH--HHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 489999999999999999874 5788888653 2222 12221 32 3344455444 66 88899
Q ss_pred cchheecccccCccCh------hcHHHHHHHHHhcccCCcEEEEe
Q 046488 388 LDLIHTTRFLDGWIDF------VLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 388 FDlV~ss~vL~h~~d~------~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
||.|+.... ..|... .....++.++.|+|||||+|++.
T Consensus 129 ~d~v~~~~p-~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 129 LSKMFFCFP-DPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp EEEEEEESC-CCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred cCEEEEECC-CcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 999985321 122110 00025899999999999999884
No 203
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.77 E-value=1.8e-08 Score=95.14 Aligned_cols=106 Identities=15% Similarity=0.127 Sum_probs=67.9
Q ss_pred hHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC---CCEEEEEecCCCh--hHHHHHHHhCC---CCeeeecccC-CC--
Q 046488 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMREF---NVTLVSAIINLGA--PFNEMIALRGL---VPLYITINQR-VP-- 382 (480)
Q Consensus 314 ~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~--~~~~~iA~rgl---ip~~~~~ae~-LP-- 382 (480)
++..++.+.++ .+|||+|||+|.++..+++. +..+++++.+... .+...+...+. +.+..+++.. ++
T Consensus 51 ~l~~l~~~~~~--~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~ 128 (239)
T 2hnk_A 51 FLNILTKISGA--KRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVL 128 (239)
T ss_dssp HHHHHHHHHTC--SEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHH
T ss_pred HHHHHHHhhCc--CEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHH
Confidence 44445544444 48999999999999999886 5688888865211 11112222232 2333333211 22
Q ss_pred ------------CCC--CccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 383 ------------FFD--NTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 383 ------------Fpd--~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
|++ ++||+|++.....+ ...++.++.++|||||++++..
T Consensus 129 ~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~------~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 129 IDSKSAPSWASDFAFGPSSIDLFFLDADKEN------YPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp HHCSSCCGGGTTTCCSTTCEEEEEECSCGGG------HHHHHHHHHHHEEEEEEEEEEC
T ss_pred HhhcccccccccccCCCCCcCEEEEeCCHHH------HHHHHHHHHHHcCCCeEEEEEc
Confidence 444 89999998754321 2468999999999999999975
No 204
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.76 E-value=3.3e-08 Score=104.67 Aligned_cols=158 Identities=17% Similarity=0.186 Sum_probs=93.7
Q ss_pred hhhHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC---CCEEEEEecCCChhHHH----HHHHhCC-CCeeeecccCCC-
Q 046488 312 DFLIPEVLDIKPGEIRIGLDFSIGTGTFAARMREF---NVTLVSAIINLGAPFNE----MIALRGL-VPLYITINQRVP- 382 (480)
Q Consensus 312 d~~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~~~~~----~iA~rgl-ip~~~~~ae~LP- 382 (480)
..++..+++..++. +|||+|||+|..+..++++ ...+++++++. .+.. .+...|. +.+..+++..++
T Consensus 90 s~l~a~~L~~~~g~--~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~--~~l~~a~~n~~r~G~~v~~~~~Da~~l~~ 165 (464)
T 3m6w_A 90 AQAVGVLLDPKPGE--RVLDLAAAPGGKTTHLAARMGGKGLLLANEVDG--KRVRGLLENVERWGAPLAVTQAPPRALAE 165 (464)
T ss_dssp THHHHHHHCCCTTC--EEEESSCTTCHHHHHHHHHTTTCSEEEEECSCH--HHHHHHHHHHHHHCCCCEEECSCHHHHHH
T ss_pred HHHHHHhcCcCCCC--EEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCH--HHHHHHHHHHHHcCCeEEEEECCHHHhhh
Confidence 33555677777664 8999999999999999875 24777777652 2222 2222233 233344455555
Q ss_pred CCCCccchhee----c--ccccCccCh------h-------cHHHHHHHHHhcccCCcEEEEeecc-CChhhHHHHHHHH
Q 046488 383 FFDNTLDLIHT----T--RFLDGWIDF------V-------LLDFILYDWDRVLRPGGLLWIDSFF-CAKEDMNDYLEVF 442 (480)
Q Consensus 383 Fpd~SFDlV~s----s--~vL~h~~d~------~-------~l~~~L~EI~RVLKPGG~fiI~~f~-~~~edL~~~~~~l 442 (480)
+.+++||+|++ + .++.+.++. . ....+|.++.++|||||+++++.-. ...+.-+.+..++
T Consensus 166 ~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l 245 (464)
T 3m6w_A 166 AFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFL 245 (464)
T ss_dssp HHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHH
T ss_pred hccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHH
Confidence 45789999995 1 222221111 0 0146899999999999999986422 2223333444555
Q ss_pred HHc-CceeeEE------------------------EEeeccCCCCcceeEEEEEEeCC
Q 046488 443 KML-KYKKHKW------------------------VVVPKRDKDDREVFFSAVLEKPP 475 (480)
Q Consensus 443 ~~l-Gfkkl~W------------------------~~~~k~d~~~~E~~lsav~qKP~ 475 (480)
++. +|+.+.. ...+.. ...+.|+.|+++|.-
T Consensus 246 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~--~~~dGfF~A~l~k~~ 301 (464)
T 3m6w_A 246 KAHPEFRLEDARLHPLFAPGVPEWGEGNPELLKTARLWPHR--LEGEGHFLARFRKEG 301 (464)
T ss_dssp HHCTTEEEECCCCSTTSEECCGGGTTTCGGGGGSEEECTTT--SSSSCEEEEEEEECS
T ss_pred HHCCCcEEEecccccccccCcccccccccccCCeEEECCCC--CCceeEEEEEEEECC
Confidence 554 3443221 111111 346889999999974
No 205
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.75 E-value=1.3e-07 Score=93.91 Aligned_cols=119 Identities=18% Similarity=0.138 Sum_probs=71.0
Q ss_pred CCeEEEECCCCcHHHHHHhhC-C-CEEEEEecCCChhHHHHHHHh------------CCCCeeeeccc-CCCCCCCccch
Q 046488 326 IRIGLDFSIGTGTFAARMREF-N-VTLVSAIINLGAPFNEMIALR------------GLVPLYITINQ-RVPFFDNTLDL 390 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~-g-V~Vv~vd~d~~~~~~~~iA~r------------glip~~~~~ae-~LPFpd~SFDl 390 (480)
.++|||||||+|.++..++++ + ..+++++++.. + ..+|++ ..+.+..+++. -++..+++||+
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~--v-i~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAG--V-VSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTT--H-HHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHH--H-HHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccE
Confidence 468999999999999999987 3 46777777642 2 222221 13455556543 34556889999
Q ss_pred heecccccCccChhcH--HHHHHHHHhcccCCcEEEEee---ccCChhhHHHHHHHHHHcCceee
Q 046488 391 IHTTRFLDGWIDFVLL--DFILYDWDRVLRPGGLLWIDS---FFCAKEDMNDYLEVFKMLKYKKH 450 (480)
Q Consensus 391 V~ss~vL~h~~d~~~l--~~~L~EI~RVLKPGG~fiI~~---f~~~~edL~~~~~~l~~lGfkkl 450 (480)
|++...- ++.....+ ..++.++.|+|||||++++.. +... +.+..+...++.. |..+
T Consensus 161 Ii~D~~~-p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~-~~~~~~~~~l~~~-F~~v 222 (294)
T 3adn_A 161 IISDCTD-PIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQ-EEAIDSHRKLSHY-FSDV 222 (294)
T ss_dssp EEECC-----------CCHHHHHHHHHTEEEEEEEEEEEEECSSCC-HHHHHHHHHHHHH-CSEE
T ss_pred EEECCCC-ccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccch-HHHHHHHHHHHHH-CCCe
Confidence 9985432 22222111 458999999999999998863 3322 3344444445443 4443
No 206
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.74 E-value=3.8e-08 Score=103.98 Aligned_cols=161 Identities=18% Similarity=0.172 Sum_probs=96.1
Q ss_pred hhhHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC---CCEEEEEecCCCh--hHHHHHHHhCCCC--eeeecccCCC-C
Q 046488 312 DFLIPEVLDIKPGEIRIGLDFSIGTGTFAARMREF---NVTLVSAIINLGA--PFNEMIALRGLVP--LYITINQRVP-F 383 (480)
Q Consensus 312 d~~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~--~~~~~iA~rglip--~~~~~ae~LP-F 383 (480)
..++..+|+..++. +|||+|||+|..+..++++ ...+++++++... .+.+.+.+.|.-. +..+++..++ +
T Consensus 94 s~l~~~~L~~~~g~--~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~ 171 (456)
T 3m4x_A 94 AMIVGTAAAAKPGE--KVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPH 171 (456)
T ss_dssp THHHHHHHCCCTTC--EEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHH
T ss_pred HHHHHHHcCCCCCC--EEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhh
Confidence 33556677777765 8999999999999998875 3577787765211 1122233334322 2334444444 3
Q ss_pred CCCccchheecc------cccC-------ccChh------cHHHHHHHHHhcccCCcEEEEeecc-CChhhHHHHHHHHH
Q 046488 384 FDNTLDLIHTTR------FLDG-------WIDFV------LLDFILYDWDRVLRPGGLLWIDSFF-CAKEDMNDYLEVFK 443 (480)
Q Consensus 384 pd~SFDlV~ss~------vL~h-------~~d~~------~l~~~L~EI~RVLKPGG~fiI~~f~-~~~edL~~~~~~l~ 443 (480)
.+++||+|++.- ++.. |.... ....+|.++.++|||||+++++.-. ...+.-+.+..+++
T Consensus 172 ~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~ 251 (456)
T 3m4x_A 172 FSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPEENEEIISWLVE 251 (456)
T ss_dssp HTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHH
T ss_pred ccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccccCHHHHHHHHH
Confidence 578999999631 2211 11000 0126899999999999999886422 22333344566777
Q ss_pred HcCceeeEE-----------------------EEeeccCCCCcceeEEEEEEeCCC
Q 046488 444 MLKYKKHKW-----------------------VVVPKRDKDDREVFFSAVLEKPPR 476 (480)
Q Consensus 444 ~lGfkkl~W-----------------------~~~~k~d~~~~E~~lsav~qKP~~ 476 (480)
+.+|+-+.. ...+.. ...+.|+.|+++|.-.
T Consensus 252 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~--~~~dGFF~A~l~k~~~ 305 (456)
T 3m4x_A 252 NYPVTIEEIPLTQSVSSGRSEWGSVAGLEKTIRIWPHK--DQGEGHFVAKLTFHGQ 305 (456)
T ss_dssp HSSEEEECCCCSSCCEECCGGGSSSTTGGGSEEECTTT--SSSSCEEEEEEEECSC
T ss_pred hCCCEEEeccccccccccccccccccccCCeEEECCCC--CCCcCeEEEEEEECCC
Confidence 766543321 111111 3468899999999654
No 207
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.73 E-value=1.6e-08 Score=102.13 Aligned_cols=122 Identities=16% Similarity=0.044 Sum_probs=74.3
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHH----HHHHhCC----CCeeeecccCCC-C---CCCccchheec
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNE----MIALRGL----VPLYITINQRVP-F---FDNTLDLIHTT 394 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~----~iA~rgl----ip~~~~~ae~LP-F---pd~SFDlV~ss 394 (480)
.+|||+|||+|.++..++..|..+++++++. .+.. .+...+. +.++.+++..+. . .+++||+|++.
T Consensus 155 ~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~--~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~d 232 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAAGAEVTHVDASK--KAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTD 232 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCEEEEECSCH--HHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEEC
T ss_pred CcEEEcccccCHHHHHHHHcCCEEEEEECCH--HHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEEC
Confidence 4899999999999999999888888887652 2222 2233332 334444443322 1 16789999983
Q ss_pred c---cccC----ccChhcHHHHHHHHHhcccCCcEEEEeeccCCh---hhHHH-HHHHHHHcCceee
Q 046488 395 R---FLDG----WIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK---EDMND-YLEVFKMLKYKKH 450 (480)
Q Consensus 395 ~---vL~h----~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~---edL~~-~~~~l~~lGfkkl 450 (480)
- .... +........++.++.++|||||+|++....... +.+.. +.+.++..|++-.
T Consensus 233 PP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 233 PPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp CCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 2 1110 001112356899999999999998776543332 22222 3345556777543
No 208
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.72 E-value=3.4e-09 Score=100.90 Aligned_cols=95 Identities=13% Similarity=0.071 Sum_probs=66.8
Q ss_pred CeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHH---HHHHhCCCC--eeeecccCCCCCCCccchheecccccC
Q 046488 327 RIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNE---MIALRGLVP--LYITINQRVPFFDNTLDLIHTTRFLDG 399 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~---~iA~rglip--~~~~~ae~LPFpd~SFDlV~ss~vL~h 399 (480)
.+|||+|||+|.+|..++.. ++.++++|++. .+.+ ..+.+.++. +.+.+... ..+.++||+|.+..++|+
T Consensus 51 ~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~--~~leiar~~~~~~g~~~~v~~~d~~~-~~~~~~~DvVLa~k~LHl 127 (200)
T 3fzg_A 51 SSILDFGCGFNPLALYQWNENEKIIYHAYDIDR--AEIAFLSSIIGKLKTTIKYRFLNKES-DVYKGTYDVVFLLKMLPV 127 (200)
T ss_dssp SEEEEETCTTHHHHHHHHCSSCCCEEEEECSCH--HHHHHHHHHHHHSCCSSEEEEECCHH-HHTTSEEEEEEEETCHHH
T ss_pred CeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCH--HHHHHHHHHHHhcCCCccEEEecccc-cCCCCCcChhhHhhHHHh
Confidence 48999999999999999776 67888887763 3322 122222332 33333222 246889999999999998
Q ss_pred ccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 400 WIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 400 ~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
+.+. +.++..+.+.|||||+|+-..
T Consensus 128 L~~~---~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 128 LKQQ---DVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHHT---TCCHHHHHHTCEEEEEEEEEE
T ss_pred hhhh---HHHHHHHHHHhCCCCEEEEeC
Confidence 8333 347779999999999987643
No 209
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.72 E-value=6.3e-09 Score=98.64 Aligned_cols=95 Identities=15% Similarity=0.131 Sum_probs=63.2
Q ss_pred CeEEEECCCCcHHHHHHhhC---CCEEEEEecCCCh--hHHHHHHHhCC----CCeeeecc-cCCC-CCCCccchheecc
Q 046488 327 RIGLDFSIGTGTFAARMREF---NVTLVSAIINLGA--PFNEMIALRGL----VPLYITIN-QRVP-FFDNTLDLIHTTR 395 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~--~~~~~iA~rgl----ip~~~~~a-e~LP-Fpd~SFDlV~ss~ 395 (480)
.+|||+|||+|..+..|++. +..+++++++... .+...+...+. +.+..+++ +-++ +++++||+|++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~ 137 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQV 137 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcC
Confidence 38999999999999999874 5688888765311 11122223232 22334443 2333 3478999999754
Q ss_pred cccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 396 FLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 396 vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
... + ...++.++.|+|||||++++++
T Consensus 138 ~~~---~---~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 138 SPM---D---LKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp CTT---T---HHHHHHHHHHHEEEEEEEEETT
T ss_pred cHH---H---HHHHHHHHHHHcCCCcEEEEeC
Confidence 322 1 2458999999999999999975
No 210
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.71 E-value=3e-08 Score=99.64 Aligned_cols=127 Identities=17% Similarity=0.098 Sum_probs=80.8
Q ss_pred hcCCCCCCCCeEEEECCCCcHHHHHHhhCC---CEEEEEecCCCh--hHHHHHHHhC--CCCeeeecccCCCCCCCccch
Q 046488 318 VLDIKPGEIRIGLDFSIGTGTFAARMREFN---VTLVSAIINLGA--PFNEMIALRG--LVPLYITINQRVPFFDNTLDL 390 (480)
Q Consensus 318 vL~l~~g~iR~VLDVGCGtG~fAa~Lae~g---V~Vv~vd~d~~~--~~~~~iA~rg--lip~~~~~ae~LPFpd~SFDl 390 (480)
++...++ .+|||+|||+|.++..++..+ ..++++|++... .+...+...+ .+.+..+++..++.+.+.||+
T Consensus 198 ~~~~~~~--~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~ 275 (354)
T 3tma_A 198 LADARPG--MRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDR 275 (354)
T ss_dssp HTTCCTT--CCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSE
T ss_pred HhCCCCC--CEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCE
Confidence 3344444 479999999999999998854 788888876311 1222223334 255666778888888889999
Q ss_pred heecccccCcc-Ch----hcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEE
Q 046488 391 IHTTRFLDGWI-DF----VLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKW 452 (480)
Q Consensus 391 V~ss~vL~h~~-d~----~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W 452 (480)
|++.--+.... +. .....++.++.|+|||||.+++... .. ..+.+..+ .||+..+-
T Consensus 276 Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~---~~--~~~~~~~~-~g~~~~~~ 336 (354)
T 3tma_A 276 ILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL---RP--ALLKRALP-PGFALRHA 336 (354)
T ss_dssp EEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES---CH--HHHHHHCC-TTEEEEEE
T ss_pred EEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC---CH--HHHHHHhh-cCcEEEEE
Confidence 99953322111 11 1114689999999999999998632 11 11233444 78776543
No 211
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.70 E-value=3.9e-08 Score=95.90 Aligned_cols=98 Identities=15% Similarity=0.135 Sum_probs=68.0
Q ss_pred CCCCCCCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHH----HHHHhCC--CCeeeecccCCCCCCCccchhe
Q 046488 321 IKPGEIRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNE----MIALRGL--VPLYITINQRVPFFDNTLDLIH 392 (480)
Q Consensus 321 l~~g~iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~----~iA~rgl--ip~~~~~ae~LPFpd~SFDlV~ 392 (480)
+.++ .+|||+|||+|.++..++++ +..+++++++. .+.. .+...+. +.++.+++..++. +++||+|+
T Consensus 117 ~~~~--~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~--~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi 191 (272)
T 3a27_A 117 SNEN--EVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNP--TAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVI 191 (272)
T ss_dssp CCTT--CEEEETTCTTTTTHHHHHHHTCCSEEEEEECCH--HHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEE
T ss_pred cCCC--CEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCH--HHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEE
Confidence 4444 48999999999999999987 34788888652 2222 2222332 2344566666654 77999999
Q ss_pred ecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccC
Q 046488 393 TTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFC 430 (480)
Q Consensus 393 ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~ 430 (480)
+.... .. ..++.++.|+|||||++++..+..
T Consensus 192 ~d~p~----~~---~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 192 MGYVH----KT---HKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp ECCCS----SG---GGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ECCcc----cH---HHHHHHHHHHcCCCCEEEEEEcCc
Confidence 76543 22 348999999999999999886654
No 212
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.69 E-value=1e-08 Score=98.57 Aligned_cols=106 Identities=11% Similarity=0.035 Sum_probs=69.1
Q ss_pred hHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC---CCEEEEEecCCChh--HHHHHHHhCC---CCeeeeccc-CCCC-
Q 046488 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMREF---NVTLVSAIINLGAP--FNEMIALRGL---VPLYITINQ-RVPF- 383 (480)
Q Consensus 314 ~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~~--~~~~iA~rgl---ip~~~~~ae-~LPF- 383 (480)
++..++.+.++ ++|||||||+|..+..+++. +..+++++++.... +...+...+. +.+..+++. .+|.
T Consensus 70 ll~~l~~~~~~--~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l 147 (247)
T 1sui_A 70 FLSMLLKLINA--KNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEM 147 (247)
T ss_dssp HHHHHHHHTTC--CEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHH
T ss_pred HHHHHHHhhCc--CEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHH
Confidence 44444444333 48999999999999999875 67888888764211 1122223333 334445432 2343
Q ss_pred -----CCCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 384 -----FDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 384 -----pd~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
++++||+|++.... .+ ...++.++.|+|||||++++++
T Consensus 148 ~~~~~~~~~fD~V~~d~~~---~~---~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 148 IKDEKNHGSYDFIFVDADK---DN---YLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp HHSGGGTTCBSEEEECSCS---TT---HHHHHHHHHHHBCTTCCEEEEC
T ss_pred HhccCCCCCEEEEEEcCch---HH---HHHHHHHHHHhCCCCeEEEEec
Confidence 26899999976432 11 2568999999999999999875
No 213
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.69 E-value=1.1e-07 Score=100.82 Aligned_cols=159 Identities=18% Similarity=0.130 Sum_probs=92.4
Q ss_pred hhhHHHhcCCC--CCCCCeEEEECCCCcHHHHHHhhC---CCEEEEEecCCChhHHH----HHHHhCC--CCeeeecccC
Q 046488 312 DFLIPEVLDIK--PGEIRIGLDFSIGTGTFAARMREF---NVTLVSAIINLGAPFNE----MIALRGL--VPLYITINQR 380 (480)
Q Consensus 312 d~~I~~vL~l~--~g~iR~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~~~~~----~iA~rgl--ip~~~~~ae~ 380 (480)
..++..+|... ++. +|||+|||+|..+..|++. +..+++++++. .+.. .+...|. +.+..+++..
T Consensus 104 s~l~~~~L~~~~~~g~--~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~--~~l~~~~~n~~r~g~~nv~~~~~D~~~ 179 (479)
T 2frx_A 104 SMLPVAALFADGNAPQ--RVMDVAAAPGSKTTQISARMNNEGAILANEFSA--SRVKVLHANISRCGISNVALTHFDGRV 179 (479)
T ss_dssp HHHHHHHHTTTTCCCS--EEEESSCTTSHHHHHHHHHTTTCSEEEEECSSH--HHHHHHHHHHHHHTCCSEEEECCCSTT
T ss_pred HHHHHHHhCcccCCCC--EEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCH--HHHHHHHHHHHHcCCCcEEEEeCCHHH
Confidence 33445566665 554 8999999999999999875 35778877652 2222 2222343 2234455666
Q ss_pred CCC-CCCccchheec------ccccC-------ccChh------cHHHHHHHHHhcccCCcEEEEeecc-CChhhHHHHH
Q 046488 381 VPF-FDNTLDLIHTT------RFLDG-------WIDFV------LLDFILYDWDRVLRPGGLLWIDSFF-CAKEDMNDYL 439 (480)
Q Consensus 381 LPF-pd~SFDlV~ss------~vL~h-------~~d~~------~l~~~L~EI~RVLKPGG~fiI~~f~-~~~edL~~~~ 439 (480)
++. .+++||+|++. .++.+ |.... ....+|.++.|+|||||+++++... ...++-+.+.
T Consensus 180 ~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~ 259 (479)
T 2frx_A 180 FGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCL 259 (479)
T ss_dssp HHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHH
T ss_pred hhhhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCHHHHH
Confidence 654 57899999972 22222 21110 0135899999999999999987532 1222223334
Q ss_pred HHHHHcC-ceee-E-----------------EEEeeccCCCCcceeEEEEEEeCCC
Q 046488 440 EVFKMLK-YKKH-K-----------------WVVVPKRDKDDREVFFSAVLEKPPR 476 (480)
Q Consensus 440 ~~l~~lG-fkkl-~-----------------W~~~~k~d~~~~E~~lsav~qKP~~ 476 (480)
.++++.+ +..+ . ..+.+.. ...+.|+.|+++|...
T Consensus 260 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~r~~P~~--~~~dGfF~A~l~k~~~ 313 (479)
T 2frx_A 260 WLKETYPDAVEFLPLGDLFPGANKALTEEGFLHVFPQI--YDCEGFFVARLRKTQA 313 (479)
T ss_dssp HHHHHSTTTEEECCCTTSSTTGGGGBCTTSCEEECTTT--TTSCCEEEEEEEECSC
T ss_pred HHHHHCCCceecccccccccccccccccCCeEEECCCC--CCcCccEEEEEEEcCC
Confidence 4555543 2111 0 1111111 2357899999998653
No 214
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.68 E-value=1.5e-08 Score=95.93 Aligned_cols=95 Identities=18% Similarity=0.110 Sum_probs=63.8
Q ss_pred CeEEEECCCCcHHHHHHhhC---CCEEEEEecCCCh--hHHHHHHHhCC---CCeeeecc----cCCCCCC--Cccchhe
Q 046488 327 RIGLDFSIGTGTFAARMREF---NVTLVSAIINLGA--PFNEMIALRGL---VPLYITIN----QRVPFFD--NTLDLIH 392 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~--~~~~~iA~rgl---ip~~~~~a----e~LPFpd--~SFDlV~ 392 (480)
++|||+|||+|.++..+++. +..+++++++... .+...+...+. +.+..+.+ ..+++.+ ++||+|+
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V~ 153 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLIF 153 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEEE
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEEE
Confidence 48999999999999999875 5678888865211 11112222233 33344442 3455555 8999999
Q ss_pred ecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 393 TTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 393 ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
+.... . ....++.++.|+|||||++++++
T Consensus 154 ~d~~~----~--~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 154 IDADK----R--NYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp ECSCG----G--GHHHHHHHHHHTEEEEEEEEEEC
T ss_pred ECCCH----H--HHHHHHHHHHHHcCCCeEEEEeC
Confidence 76431 1 12568999999999999999975
No 215
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.68 E-value=1.3e-07 Score=96.33 Aligned_cols=137 Identities=10% Similarity=-0.016 Sum_probs=84.7
Q ss_pred CeEEEECCCCcHHHHHHhhCCC--EEEEEecCCCh--hHHHHHHHhCC---CCeeeecccCCCCCCCccchheecccccC
Q 046488 327 RIGLDFSIGTGTFAARMREFNV--TLVSAIINLGA--PFNEMIALRGL---VPLYITINQRVPFFDNTLDLIHTTRFLDG 399 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV--~Vv~vd~d~~~--~~~~~iA~rgl---ip~~~~~ae~LPFpd~SFDlV~ss~vL~h 399 (480)
.+|||+|||+|.++..++..+. .+++++++... .+...+...|. +.+..+++..+|+++++||+|+++-.+..
T Consensus 219 ~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPyg~ 298 (373)
T 3tm4_A 219 GSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPYGL 298 (373)
T ss_dssp CCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCCC-
T ss_pred CEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCCCCc
Confidence 4799999999999999999866 78888876311 11222223332 45666778889999999999999644322
Q ss_pred cc----Ch-hcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEEEEeeccCCCCcceeEEEEEEeC
Q 046488 400 WI----DF-VLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKWVVVPKRDKDDREVFFSAVLEKP 474 (480)
Q Consensus 400 ~~----d~-~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W~~~~k~d~~~~E~~lsav~qKP 474 (480)
.. .. .....++.++.|+| ||.+++.. +.. +.+.+.++..||+..+-...... .+-+-++|+|
T Consensus 299 r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~--~~~---~~~~~~~~~~G~~~~~~~~~~nG------~l~~~~~~~~ 365 (373)
T 3tm4_A 299 KIGKKSMIPDLYMKFFNELAKVL--EKRGVFIT--TEK---KAIEEAIAENGFEIIHHRVIGHG------GLMVHLYVVK 365 (373)
T ss_dssp -----CCHHHHHHHHHHHHHHHE--EEEEEEEE--SCH---HHHHHHHHHTTEEEEEEEEEEET------TEEEEEEEEE
T ss_pred ccCcchhHHHHHHHHHHHHHHHc--CCeEEEEE--CCH---HHHHHHHHHcCCEEEEEEEEEcC------CEEEEEEecc
Confidence 11 11 11145889999999 44444321 122 33445778889886654333221 1225567777
Q ss_pred CC
Q 046488 475 PR 476 (480)
Q Consensus 475 ~~ 476 (480)
..
T Consensus 366 ~~ 367 (373)
T 3tm4_A 366 LE 367 (373)
T ss_dssp ET
T ss_pred Cc
Confidence 55
No 216
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.68 E-value=5.3e-08 Score=99.06 Aligned_cols=116 Identities=5% Similarity=-0.097 Sum_probs=75.5
Q ss_pred CeEEEECCCCcHHHHHHhhCC--CEEEEEecCCChhHHH----HHHHhCC--CCeeeecccC-CCC-CCCccchheeccc
Q 046488 327 RIGLDFSIGTGTFAARMREFN--VTLVSAIINLGAPFNE----MIALRGL--VPLYITINQR-VPF-FDNTLDLIHTTRF 396 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~g--V~Vv~vd~d~~~~~~~----~iA~rgl--ip~~~~~ae~-LPF-pd~SFDlV~ss~v 396 (480)
.+|||+| |+|.++..++..+ ..+++++++. .+.. .+...|. +.++.+++.. +|. .+++||+|++...
T Consensus 174 ~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~--~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 174 KDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDE--RLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp CEEEEES-CTTCHHHHHHHHTCCSEEEEECSCH--HHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCH--HHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC
Confidence 5899999 9999999998875 4788887652 2222 2223343 4455566665 775 5679999999765
Q ss_pred ccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhH---HHHHHHHH-HcCcee
Q 046488 397 LDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDM---NDYLEVFK-MLKYKK 449 (480)
Q Consensus 397 L~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL---~~~~~~l~-~lGfkk 449 (480)
++... +..++.++.|+|||||++++.......... ..+.+.+. ..|+..
T Consensus 251 ~~~~~----~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 303 (373)
T 2qm3_A 251 ETLEA----IRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVI 303 (373)
T ss_dssp SSHHH----HHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHHHTSCCEE
T ss_pred CchHH----HHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHHHhcCcch
Confidence 43321 257999999999999954333322211222 44556666 778754
No 217
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.66 E-value=5.1e-08 Score=95.53 Aligned_cols=120 Identities=11% Similarity=-0.040 Sum_probs=75.5
Q ss_pred CCeEEEECCCCcHHHHHHhhC-C-CEEEEEecCCChhHHHHHHHhC-----------CCCeeeecccC-CCCCCCccchh
Q 046488 326 IRIGLDFSIGTGTFAARMREF-N-VTLVSAIINLGAPFNEMIALRG-----------LVPLYITINQR-VPFFDNTLDLI 391 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~-g-V~Vv~vd~d~~~~~~~~iA~rg-----------lip~~~~~ae~-LPFpd~SFDlV 391 (480)
.++|||+|||+|.++..++++ + ..++.++++ +.....|++. .+.++.+++.. ++..+++||+|
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid---~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~I 152 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHPSVKKATLVDID---GKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI 152 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCTTCSEEEEEESC---HHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred CCEEEEECCchHHHHHHHHhCCCCceEEEEECC---HHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEE
Confidence 468999999999999999987 4 477777766 2333333221 23344555333 44557899999
Q ss_pred eecccccCccChhc--HHHHHHHHHhcccCCcEEEEeecc--CChhhHHHHHHHHHHcCceee
Q 046488 392 HTTRFLDGWIDFVL--LDFILYDWDRVLRPGGLLWIDSFF--CAKEDMNDYLEVFKMLKYKKH 450 (480)
Q Consensus 392 ~ss~vL~h~~d~~~--l~~~L~EI~RVLKPGG~fiI~~f~--~~~edL~~~~~~l~~lGfkkl 450 (480)
++.... ++..... ...++.++.|+|||||.+++.... ...+.+..+.+.+++. |...
T Consensus 153 i~d~~~-~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v 213 (275)
T 1iy9_A 153 MVDSTE-PVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEI-FPIT 213 (275)
T ss_dssp EESCSS-CCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT-CSEE
T ss_pred EECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHh-CCCe
Confidence 985432 3321100 135899999999999999886321 1233345556666665 5543
No 218
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.64 E-value=3.6e-08 Score=98.24 Aligned_cols=120 Identities=12% Similarity=0.035 Sum_probs=72.0
Q ss_pred CCeEEEECCCCcHHHHHHhhCC--CEEEEEecCCChhHHHHHHHh-----------CCCCeeeecccC-CCCCCCccchh
Q 046488 326 IRIGLDFSIGTGTFAARMREFN--VTLVSAIINLGAPFNEMIALR-----------GLVPLYITINQR-VPFFDNTLDLI 391 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~g--V~Vv~vd~d~~~~~~~~iA~r-----------glip~~~~~ae~-LPFpd~SFDlV 391 (480)
.++|||||||+|.++..++++. ..+++++++. .....|++ ..+.++.+++.. ++..+++||+|
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~---~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDE---DVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCH---HHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCEEEEECCCchHHHHHHHHcCCCCEEEEEECCH---HHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence 3689999999999999999873 5777777652 22222222 123344555333 55567899999
Q ss_pred eecccccCccChh--cHHHHHHHHHhcccCCcEEEEee--ccCChhhHHHHHHHHHHcCceee
Q 046488 392 HTTRFLDGWIDFV--LLDFILYDWDRVLRPGGLLWIDS--FFCAKEDMNDYLEVFKMLKYKKH 450 (480)
Q Consensus 392 ~ss~vL~h~~d~~--~l~~~L~EI~RVLKPGG~fiI~~--f~~~~edL~~~~~~l~~lGfkkl 450 (480)
++.... ++.... ....++.++.|+|||||++++.. .+...+....+.+.++.. |...
T Consensus 173 i~d~~~-~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-f~~v 233 (304)
T 2o07_A 173 ITDSSD-PMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSL-FPVV 233 (304)
T ss_dssp EEECC------------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHH-CSEE
T ss_pred EECCCC-CCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHh-CCCc
Confidence 985432 222110 01358999999999999999864 222233334444444443 4433
No 219
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.64 E-value=1.7e-07 Score=94.74 Aligned_cols=119 Identities=15% Similarity=0.086 Sum_probs=74.2
Q ss_pred CeEEEECCCCcHHHHHHhh-C-CCEEEEEecCCChhHHHHHHHhC-------CCCeeeecccCC--CCCCCccchheecc
Q 046488 327 RIGLDFSIGTGTFAARMRE-F-NVTLVSAIINLGAPFNEMIALRG-------LVPLYITINQRV--PFFDNTLDLIHTTR 395 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae-~-gV~Vv~vd~d~~~~~~~~iA~rg-------lip~~~~~ae~L--PFpd~SFDlV~ss~ 395 (480)
.+|||||||+|.++..+++ . ++.++.++++ +....+|++. .+.++++++..+ .+++++||+|++..
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEid---p~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~ 167 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELD---AELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDV 167 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESC---HHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECC
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECC---HHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECC
Confidence 3899999999999999998 3 6778787766 3444444432 133445554332 34678999999854
Q ss_pred cccCccChhcH--HHHHHHHHhcccCCcEEEEeeccCCh-hhHHHHHHHHHHcCceee
Q 046488 396 FLDGWIDFVLL--DFILYDWDRVLRPGGLLWIDSFFCAK-EDMNDYLEVFKMLKYKKH 450 (480)
Q Consensus 396 vL~h~~d~~~l--~~~L~EI~RVLKPGG~fiI~~f~~~~-edL~~~~~~l~~lGfkkl 450 (480)
.. ++..+..+ ..++.++.|+|||||+|++....... ..+..+...++.. |..+
T Consensus 168 ~~-~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~v-F~~v 223 (317)
T 3gjy_A 168 FA-GAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEV-FEHV 223 (317)
T ss_dssp ST-TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHH-CSEE
T ss_pred CC-ccccchhhhHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHH-CCce
Confidence 32 22211111 46999999999999999886543222 2233444444443 5443
No 220
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.64 E-value=9.4e-08 Score=92.67 Aligned_cols=120 Identities=11% Similarity=0.009 Sum_probs=80.8
Q ss_pred CeEEEECCCCcHHHHHHhhCCC--EEEEEecCCCh--hHHHHHHHhCC---CCeeeecccCCCCCCCccchheecccccC
Q 046488 327 RIGLDFSIGTGTFAARMREFNV--TLVSAIINLGA--PFNEMIALRGL---VPLYITINQRVPFFDNTLDLIHTTRFLDG 399 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV--~Vv~vd~d~~~--~~~~~iA~rgl---ip~~~~~ae~LPFpd~SFDlV~ss~vL~h 399 (480)
.+|||||||+|.++..++..+. .|+++|.+..+ .+...++..+. +.+..++......+++.||+|+.....-
T Consensus 23 ~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmGg- 101 (230)
T 3lec_A 23 ARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGMGG- 101 (230)
T ss_dssp EEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECH-
T ss_pred CEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCCch-
Confidence 4899999999999999999863 46777765321 12233444443 3445565444444555899988655432
Q ss_pred ccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEEEEe
Q 046488 400 WIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKWVVV 455 (480)
Q Consensus 400 ~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W~~~ 455 (480)
..+..++.+..+.|+++|+|++.... ....+.+.+...||.-..-...
T Consensus 102 ----~lI~~IL~~~~~~l~~~~~lIlqp~~----~~~~lr~~L~~~Gf~i~~E~lv 149 (230)
T 3lec_A 102 ----RLIADILNNDIDKLQHVKTLVLQPNN----REDDLRKWLAANDFEIVAEDIL 149 (230)
T ss_dssp ----HHHHHHHHHTGGGGTTCCEEEEEESS----CHHHHHHHHHHTTEEEEEEEEE
T ss_pred ----HHHHHHHHHHHHHhCcCCEEEEECCC----ChHHHHHHHHHCCCEEEEEEEE
Confidence 22356899999999999999997632 2455667788889987665544
No 221
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.63 E-value=5.9e-08 Score=96.04 Aligned_cols=119 Identities=11% Similarity=-0.017 Sum_probs=71.3
Q ss_pred CeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHHHHHHhC-----------CCCeeeecccC-CCCCCCccchhe
Q 046488 327 RIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNEMIALRG-----------LVPLYITINQR-VPFFDNTLDLIH 392 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA~rg-----------lip~~~~~ae~-LPFpd~SFDlV~ 392 (480)
.+|||+|||+|.++..++++ ...+++++++. .....+++. .+.++.+++.. ++..+++||+|+
T Consensus 92 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~---~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 92 KKVLIIGGGDGGTLREVLKHDSVEKAILCEVDG---LVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp CEEEEEECTTCHHHHHHTTSTTCSEEEEEESCH---HHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCH---HHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 58999999999999999987 35777877652 222222221 23344454332 455678999999
Q ss_pred ecccccCccC-hh--cHHHHHHHHHhcccCCcEEEEeecc--CChhhHHHHHHHHHHcCceee
Q 046488 393 TTRFLDGWID-FV--LLDFILYDWDRVLRPGGLLWIDSFF--CAKEDMNDYLEVFKMLKYKKH 450 (480)
Q Consensus 393 ss~vL~h~~d-~~--~l~~~L~EI~RVLKPGG~fiI~~f~--~~~edL~~~~~~l~~lGfkkl 450 (480)
+... .+|.. .. ....++.++.|+|||||.+++.... ...+....+.+.+++. |..+
T Consensus 169 ~d~~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v 229 (296)
T 1inl_A 169 IDST-DPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKV-FPIT 229 (296)
T ss_dssp EEC-----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHH-CSEE
T ss_pred EcCC-CcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHH-CCce
Confidence 7432 23111 10 0146899999999999999886311 1233344455555554 5443
No 222
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.63 E-value=2e-08 Score=93.25 Aligned_cols=106 Identities=15% Similarity=0.113 Sum_probs=67.0
Q ss_pred hHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC---CCEEEEEecCCCh--hHHHHHHHhCC---CCeeeeccc----CC
Q 046488 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMREF---NVTLVSAIINLGA--PFNEMIALRGL---VPLYITINQ----RV 381 (480)
Q Consensus 314 ~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~--~~~~~iA~rgl---ip~~~~~ae----~L 381 (480)
++..++.+.++ .+|||+|||+|.++..+++. +..+++++++... .+...+...+. +.+..+++. .+
T Consensus 60 ~l~~l~~~~~~--~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~ 137 (229)
T 2avd_A 60 LLANLARLIQA--KKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDEL 137 (229)
T ss_dssp HHHHHHHHTTC--CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHH
T ss_pred HHHHHHHhcCC--CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHH
Confidence 44444444444 48999999999999999985 5688888876421 11122222332 333444322 12
Q ss_pred CCCC--CccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 382 PFFD--NTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 382 PFpd--~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
+... ++||+|++.... . ....++.++.|+|||||++++.+
T Consensus 138 ~~~~~~~~~D~v~~d~~~----~--~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 138 LAAGEAGTFDVAVVDADK----E--NCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp HHTTCTTCEEEEEECSCS----T--THHHHHHHHHHHEEEEEEEEEEC
T ss_pred HhcCCCCCccEEEECCCH----H--HHHHHHHHHHHHcCCCeEEEEEC
Confidence 2111 789999985431 1 12468999999999999999975
No 223
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.62 E-value=8.2e-08 Score=97.23 Aligned_cols=97 Identities=15% Similarity=0.069 Sum_probs=64.1
Q ss_pred CCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHHHHHHh-----------CCCCeeeecccC-CC-CCCCccch
Q 046488 326 IRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNEMIALR-----------GLVPLYITINQR-VP-FFDNTLDL 390 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA~r-----------glip~~~~~ae~-LP-Fpd~SFDl 390 (480)
.++|||||||+|.++..++++ ...+++++++. .....|++ ..+.++.+++.. ++ +++++||+
T Consensus 121 ~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~---~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 121 PKKVLVIGGGDGGVLREVARHASIEQIDMCEIDK---MVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp CCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCH---HHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCEEEEECCCccHHHHHHHHcCCCCEEEEEECCH---HHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 368999999999999999987 35778887652 22222222 123344555333 22 35789999
Q ss_pred heecccccCccChhc--HHHHHHHHHhcccCCcEEEEe
Q 046488 391 IHTTRFLDGWIDFVL--LDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 391 V~ss~vL~h~~d~~~--l~~~L~EI~RVLKPGG~fiI~ 426 (480)
|++... .++..... ...++.++.|+|||||+|++.
T Consensus 198 Ii~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 198 VIVDSS-DPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEECCC-CTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCC-CccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 998543 22211110 156999999999999999985
No 224
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.62 E-value=2.1e-07 Score=91.23 Aligned_cols=118 Identities=11% Similarity=0.027 Sum_probs=71.4
Q ss_pred CeEEEECCCCcHHHHHHhhCC-CEEEEEecCCChhHHHHHHHhC-----------------CCCeeeecccC-CCCCCCc
Q 046488 327 RIGLDFSIGTGTFAARMREFN-VTLVSAIINLGAPFNEMIALRG-----------------LVPLYITINQR-VPFFDNT 387 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~g-V~Vv~vd~d~~~~~~~~iA~rg-----------------lip~~~~~ae~-LPFpd~S 387 (480)
.+|||||||+|.++..+++++ ..+++++++ +.....|++. .+.+..+++.. ++. +++
T Consensus 77 ~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid---~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 77 KRVLVIGGGDGGTVREVLQHDVDEVIMVEID---EDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp CEEEEEECTTSHHHHHHTTSCCSEEEEEESC---HHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CeEEEEcCCcCHHHHHHHhCCCCEEEEEECC---HHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 589999999999999999874 467777765 2223333221 12233344322 333 789
Q ss_pred cchheecccccCccChhcH--HHHHHHHHhcccCCcEEEEeec--cCChhhHHHHHHHHHHcCceee
Q 046488 388 LDLIHTTRFLDGWIDFVLL--DFILYDWDRVLRPGGLLWIDSF--FCAKEDMNDYLEVFKMLKYKKH 450 (480)
Q Consensus 388 FDlV~ss~vL~h~~d~~~l--~~~L~EI~RVLKPGG~fiI~~f--~~~~edL~~~~~~l~~lGfkkl 450 (480)
||+|++.... ++.....+ ..++.++.|+|||||.+++..- +...+.+..+.+.++.. |...
T Consensus 153 fD~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-f~~v 217 (281)
T 1mjf_A 153 FDVIIADSTD-PVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKV-FDRV 217 (281)
T ss_dssp EEEEEEECCC-CC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHH-CSEE
T ss_pred eeEEEECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHH-CCce
Confidence 9999985442 33221111 4689999999999999988631 12233344555555554 5443
No 225
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.61 E-value=3.3e-08 Score=98.69 Aligned_cols=120 Identities=13% Similarity=-0.044 Sum_probs=75.0
Q ss_pred CCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHHHHHHh------------CCCCeeeecccC-CCCCCCccch
Q 046488 326 IRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNEMIALR------------GLVPLYITINQR-VPFFDNTLDL 390 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA~r------------glip~~~~~ae~-LPFpd~SFDl 390 (480)
.++|||||||+|.++..++++ +..+++++++. .....|++ ..+.++.+++.. ++..+++||+
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~---~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDG---ELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDV 154 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCH---HHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCH---HHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccE
Confidence 358999999999999999987 45777777662 22222221 123344555433 4556889999
Q ss_pred heecccccCc---cChhc--HHHHHHHHHhcccCCcEEEEeecc---CChhhHHHHHHHHHHcCceee
Q 046488 391 IHTTRFLDGW---IDFVL--LDFILYDWDRVLRPGGLLWIDSFF---CAKEDMNDYLEVFKMLKYKKH 450 (480)
Q Consensus 391 V~ss~vL~h~---~d~~~--l~~~L~EI~RVLKPGG~fiI~~f~---~~~edL~~~~~~l~~lGfkkl 450 (480)
|++.... ++ ..... ...++.++.|+|||||.+++.... ...+....+.+.++.. |...
T Consensus 155 Ii~d~~~-~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~-F~~v 220 (314)
T 1uir_A 155 VIIDLTD-PVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREA-FRYV 220 (314)
T ss_dssp EEEECCC-CBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTT-CSEE
T ss_pred EEECCCC-cccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHH-CCce
Confidence 9986543 44 21111 156899999999999999886321 1123344555666665 5433
No 226
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.60 E-value=2.4e-07 Score=93.05 Aligned_cols=119 Identities=16% Similarity=0.103 Sum_probs=74.7
Q ss_pred CeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHHHHHHhC-----------CCCeeeecccC-CCCCCCccchhe
Q 046488 327 RIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNEMIALRG-----------LVPLYITINQR-VPFFDNTLDLIH 392 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA~rg-----------lip~~~~~ae~-LPFpd~SFDlV~ 392 (480)
.+|||||||+|.++..++++ +..+++++++ +.....|++. .+.+..+++.. ++..+++||+|+
T Consensus 118 ~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis---~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 118 KNVLVVGGGDGGIIRELCKYKSVENIDICEID---ETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp CEEEEEECTTCHHHHHHTTCTTCCEEEEEESC---HHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CEEEEEcCCccHHHHHHHHcCCCCEEEEEECC---HHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 58999999999999999987 4577888766 2333333321 12234444322 344578999999
Q ss_pred ecccccCccChhcH--HHHHHHHHhcccCCcEEEEeec--cCChhhHHHHHHHHHHcCceee
Q 046488 393 TTRFLDGWIDFVLL--DFILYDWDRVLRPGGLLWIDSF--FCAKEDMNDYLEVFKMLKYKKH 450 (480)
Q Consensus 393 ss~vL~h~~d~~~l--~~~L~EI~RVLKPGG~fiI~~f--~~~~edL~~~~~~l~~lGfkkl 450 (480)
+... .++.....+ ..++.++.|+|||||++++... +...+.+..+.+.++.. |...
T Consensus 195 ~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v 254 (321)
T 2pt6_A 195 VDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKL-FKKV 254 (321)
T ss_dssp EECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTT-CSEE
T ss_pred ECCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHH-CCCe
Confidence 8542 233221111 4689999999999999988531 12333455555666665 4443
No 227
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.59 E-value=5.2e-08 Score=97.79 Aligned_cols=120 Identities=13% Similarity=0.051 Sum_probs=70.8
Q ss_pred CCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHHHHHHhCC-----------CCeeeecccC-CCCCCCccchh
Q 046488 326 IRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNEMIALRGL-----------VPLYITINQR-VPFFDNTLDLI 391 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA~rgl-----------ip~~~~~ae~-LPFpd~SFDlV 391 (480)
.++|||||||+|.++..++++ ...+++++++ +.....|++.. +.+..+++.. ++..+++||+|
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid---~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 185 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESVEKVTMCEID---EMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVI 185 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTCCEEEEECSC---HHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECC---HHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEE
Confidence 358999999999999999987 3577777765 33333333321 2233344322 44467899999
Q ss_pred eecccccCccChhcH--HHHHHHHHhcccCCcEEEEee--ccCChhhHHHHHHHHHHcCceee
Q 046488 392 HTTRFLDGWIDFVLL--DFILYDWDRVLRPGGLLWIDS--FFCAKEDMNDYLEVFKMLKYKKH 450 (480)
Q Consensus 392 ~ss~vL~h~~d~~~l--~~~L~EI~RVLKPGG~fiI~~--f~~~~edL~~~~~~l~~lGfkkl 450 (480)
++... .++.....+ ..++.++.|+|||||++++.. .+...+....+.+.++.+ |...
T Consensus 186 i~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~v-F~~v 246 (314)
T 2b2c_A 186 ITDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKI-FPAV 246 (314)
T ss_dssp EECCC--------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHH-CSEE
T ss_pred EEcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHH-CCcc
Confidence 98543 333222111 468999999999999999863 112233344455555554 5433
No 228
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.59 E-value=1.2e-07 Score=92.66 Aligned_cols=120 Identities=11% Similarity=-0.012 Sum_probs=79.0
Q ss_pred CeEEEECCCCcHHHHHHhhCCC--EEEEEecCCCh--hHHHHHHHhCC---CCeeeecccCCCCCCCccchheecccccC
Q 046488 327 RIGLDFSIGTGTFAARMREFNV--TLVSAIINLGA--PFNEMIALRGL---VPLYITINQRVPFFDNTLDLIHTTRFLDG 399 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV--~Vv~vd~d~~~--~~~~~iA~rgl---ip~~~~~ae~LPFpd~SFDlV~ss~vL~h 399 (480)
.+|||||||+|.++..|+..+. .+++++++..+ .+...++..+. +.+..++......+++.||+|+.....-
T Consensus 23 ~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmGg- 101 (244)
T 3gnl_A 23 ERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMGG- 101 (244)
T ss_dssp EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECH-
T ss_pred CEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCCch-
Confidence 3899999999999999999863 56777765321 12223334443 3445555444444444699988654432
Q ss_pred ccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEEEEe
Q 046488 400 WIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKWVVV 455 (480)
Q Consensus 400 ~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W~~~ 455 (480)
..+..++.+..+.|+++|+|++..-. ....+.+.+...||.-..-...
T Consensus 102 ----~lI~~IL~~~~~~L~~~~~lIlq~~~----~~~~lr~~L~~~Gf~i~~E~lv 149 (244)
T 3gnl_A 102 ----TLIRTILEEGAAKLAGVTKLILQPNI----AAWQLREWSEQNNWLITSEAIL 149 (244)
T ss_dssp ----HHHHHHHHHTGGGGTTCCEEEEEESS----CHHHHHHHHHHHTEEEEEEEEE
T ss_pred ----HHHHHHHHHHHHHhCCCCEEEEEcCC----ChHHHHHHHHHCCCEEEEEEEE
Confidence 22356899999999999999997532 3345666778889986654443
No 229
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.59 E-value=1.2e-07 Score=94.37 Aligned_cols=145 Identities=10% Similarity=0.017 Sum_probs=83.7
Q ss_pred CCCCCCCeEEEECCCCcHHHHHHhhC-CCE-EEEEecCCChhHHH-HHHHhC-CCCeeeecccCCCCCCCccchheeccc
Q 046488 321 IKPGEIRIGLDFSIGTGTFAARMREF-NVT-LVSAIINLGAPFNE-MIALRG-LVPLYITINQRVPFFDNTLDLIHTTRF 396 (480)
Q Consensus 321 l~~g~iR~VLDVGCGtG~fAa~Lae~-gV~-Vv~vd~d~~~~~~~-~iA~rg-lip~~~~~ae~LPFpd~SFDlV~ss~v 396 (480)
++++. +|||+|||+|.|+..++++ ++. +.++++...-+... .....+ .+-...+.++...+.++.||+|+|..+
T Consensus 72 l~~~~--~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~a 149 (277)
T 3evf_A 72 VKLEG--RVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIG 149 (277)
T ss_dssp SCCCE--EEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC
T ss_pred CCCCC--EEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCc
Confidence 55553 7999999999999988875 443 33333321000000 000000 011122334556788899999999765
Q ss_pred cc---CccChhcHHHHHHHHHhcccCC-cEEEEeeccCChhhHHHHHHHHHHcCceeeEEEEeeccCCCCcceeEEE
Q 046488 397 LD---GWIDFVLLDFILYDWDRVLRPG-GLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKWVVVPKRDKDDREVFFSA 469 (480)
Q Consensus 397 L~---h~~d~~~l~~~L~EI~RVLKPG-G~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W~~~~k~d~~~~E~~lsa 469 (480)
.. ++.|......+|..+.++|||| |.|++.-|..-.++...+...+++. |+++.+..- -......|+|+.+
T Consensus 150 pnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~~~lk~~-F~~V~~~KP-aSR~~S~E~Y~V~ 224 (277)
T 3evf_A 150 ESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLEKLELLQRR-FGGTVIRNP-LSRNSTHEMYYVS 224 (277)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHH-HCCEEECCT-TSCTTCCCEEEES
T ss_pred cCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccHHHHHHHHHHh-cCCEEEEeC-CCCCCCCceEEEE
Confidence 43 1333321123578889999999 9999966654345555555555554 777665443 2222567888864
No 230
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.56 E-value=1.2e-07 Score=93.15 Aligned_cols=120 Identities=16% Similarity=0.095 Sum_probs=74.6
Q ss_pred CCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHHHHHHhC-----------CCCeeeecccC-CCCCCCccchh
Q 046488 326 IRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNEMIALRG-----------LVPLYITINQR-VPFFDNTLDLI 391 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA~rg-----------lip~~~~~ae~-LPFpd~SFDlV 391 (480)
.++|||+|||+|.++..++++ +..+++++++ +.....+++. .+.+..+++.. ++..+++||+|
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid---~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYKSVENIDICEID---ETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 155 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESC---HHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECC---HHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEE
Confidence 368999999999999999987 3577777766 3333333332 12234444332 33347899999
Q ss_pred eecccccCccChhcH--HHHHHHHHhcccCCcEEEEeec--cCChhhHHHHHHHHHHcCceee
Q 046488 392 HTTRFLDGWIDFVLL--DFILYDWDRVLRPGGLLWIDSF--FCAKEDMNDYLEVFKMLKYKKH 450 (480)
Q Consensus 392 ~ss~vL~h~~d~~~l--~~~L~EI~RVLKPGG~fiI~~f--~~~~edL~~~~~~l~~lGfkkl 450 (480)
++... .++.....+ ..++.++.|+|||||.+++... +...+....+...++.. |...
T Consensus 156 i~d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~-F~~v 216 (283)
T 2i7c_A 156 IVDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKL-FKKV 216 (283)
T ss_dssp EEECC-CTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTT-CSEE
T ss_pred EEcCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHH-CCce
Confidence 98543 233222222 4699999999999999988631 12233344455555554 5543
No 231
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.56 E-value=2.1e-07 Score=89.77 Aligned_cols=119 Identities=12% Similarity=0.035 Sum_probs=77.6
Q ss_pred CeEEEECCCCcHHHHHHhhCCC--EEEEEecCCCh--hHHHHHHHhCC---CCeeeec-ccCCCCCCCccchheeccccc
Q 046488 327 RIGLDFSIGTGTFAARMREFNV--TLVSAIINLGA--PFNEMIALRGL---VPLYITI-NQRVPFFDNTLDLIHTTRFLD 398 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV--~Vv~vd~d~~~--~~~~~iA~rgl---ip~~~~~-ae~LPFpd~SFDlV~ss~vL~ 398 (480)
.+|||||||+|.++..++..+. .|++++.+..+ .+...++..+. +.+..++ .+.++.. ..||+|+....-
T Consensus 17 ~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~-~~~D~IviaG~G- 94 (225)
T 3kr9_A 17 AILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEET-DQVSVITIAGMG- 94 (225)
T ss_dssp EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGG-GCCCEEEEEEEC-
T ss_pred CEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccC-cCCCEEEEcCCC-
Confidence 3899999999999999999763 56777765321 12223333443 2344444 3444432 269998865432
Q ss_pred CccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEEEEe
Q 046488 399 GWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKWVVV 455 (480)
Q Consensus 399 h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W~~~ 455 (480)
...+..++.+..+.|+|+|+|++..- .....+...+...||.-..-...
T Consensus 95 ----g~~i~~Il~~~~~~L~~~~~lVlq~~----~~~~~vr~~L~~~Gf~i~~e~lv 143 (225)
T 3kr9_A 95 ----GRLIARILEEGLGKLANVERLILQPN----NREDDLRIWLQDHGFQIVAESIL 143 (225)
T ss_dssp ----HHHHHHHHHHTGGGCTTCCEEEEEES----SCHHHHHHHHHHTTEEEEEEEEE
T ss_pred ----hHHHHHHHHHHHHHhCCCCEEEEECC----CCHHHHHHHHHHCCCEEEEEEEE
Confidence 12235689999999999999998654 23345667788889987654443
No 232
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.54 E-value=5.1e-08 Score=92.79 Aligned_cols=106 Identities=11% Similarity=0.018 Sum_probs=67.5
Q ss_pred hHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC---CCEEEEEecCCCh--hHHHHHHHhCC---CCeeeecc-cCCCC-
Q 046488 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMREF---NVTLVSAIINLGA--PFNEMIALRGL---VPLYITIN-QRVPF- 383 (480)
Q Consensus 314 ~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~--~~~~~iA~rgl---ip~~~~~a-e~LPF- 383 (480)
++..++...++ ++|||||||+|..+..+++. +..+++++++... .+...+...+. +.+..+++ +.++.
T Consensus 61 ~l~~l~~~~~~--~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l 138 (237)
T 3c3y_A 61 LMSFVLKLVNA--KKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNL 138 (237)
T ss_dssp HHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHH
T ss_pred HHHHHHHhhCC--CEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHH
Confidence 44444444333 48999999999999999875 5688888865211 11122223333 23444442 22332
Q ss_pred -----CCCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 384 -----FDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 384 -----pd~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
++++||+|++... ... ...++.++.|+|||||++++++
T Consensus 139 ~~~~~~~~~fD~I~~d~~----~~~--~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 139 LQGQESEGSYDFGFVDAD----KPN--YIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp HHSTTCTTCEEEEEECSC----GGG--HHHHHHHHHHHEEEEEEEEEEC
T ss_pred HhccCCCCCcCEEEECCc----hHH--HHHHHHHHHHhcCCCeEEEEec
Confidence 2689999997532 211 2568999999999999999875
No 233
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.51 E-value=1.9e-07 Score=91.85 Aligned_cols=100 Identities=14% Similarity=0.181 Sum_probs=63.0
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHh----C---CCCeeeecccCCCCCCCccc
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALR----G---LVPLYITINQRVPFFDNTLD 389 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~r----g---lip~~~~~ae~LPFpd~SFD 389 (480)
+.+++.++ .+|||||||+|.++..|++++..+++++++. .+......+ + .+.++.+++..++++ +||
T Consensus 22 ~~~~~~~~--~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~--~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~--~fD 95 (285)
T 1zq9_A 22 DKAALRPT--DVVLEVGPGTGNMTVKLLEKAKKVVACELDP--RLVAELHKRVQGTPVASKLQVLVGDVLKTDLP--FFD 95 (285)
T ss_dssp HHTCCCTT--CEEEEECCTTSTTHHHHHHHSSEEEEEESCH--HHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--CCS
T ss_pred HhcCCCCC--CEEEEEcCcccHHHHHHHhhCCEEEEEECCH--HHHHHHHHHHHhcCCCCceEEEEcceecccch--hhc
Confidence 34445444 4899999999999999999888888888762 332222211 1 234455667666765 799
Q ss_pred hheecccccCccChhcHHHHH--------------HHH--HhcccCCcEEE
Q 046488 390 LIHTTRFLDGWIDFVLLDFIL--------------YDW--DRVLRPGGLLW 424 (480)
Q Consensus 390 lV~ss~vL~h~~d~~~l~~~L--------------~EI--~RVLKPGG~fi 424 (480)
+|+++..+ +|..+. +..++ .|+ +|+|||||.++
T Consensus 96 ~vv~nlpy-~~~~~~-~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 96 TCVANLPY-QISSPF-VFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp EEEEECCG-GGHHHH-HHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred EEEEecCc-ccchHH-HHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 99986432 232221 01122 344 47999999863
No 234
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.50 E-value=2.9e-07 Score=92.57 Aligned_cols=115 Identities=13% Similarity=0.108 Sum_probs=73.1
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCCh--hHHHHHHHhCC---CCeeeecccCCCCCCCccchheecccccCcc
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGA--PFNEMIALRGL---VPLYITINQRVPFFDNTLDLIHTTRFLDGWI 401 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~--~~~~~iA~rgl---ip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~ 401 (480)
.+|||+|||+|.++.. ++.+..+++++.+..+ .+...+...+. +.++.+++..+. ++||+|++.--. .
T Consensus 197 ~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~--~- 269 (336)
T 2yx1_A 197 DVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPK--F- 269 (336)
T ss_dssp CEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTT--T-
T ss_pred CEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcH--h-
Confidence 4899999999999999 8766788888876311 11222333332 334455555554 899999974211 1
Q ss_pred ChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHc-CceeeEEEEe
Q 046488 402 DFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKML-KYKKHKWVVV 455 (480)
Q Consensus 402 d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~l-Gfkkl~W~~~ 455 (480)
. ..++.++.++|+|||++++..+... .+...+.++.. |++...+...
T Consensus 270 -~---~~~l~~~~~~L~~gG~l~~~~~~~~---~~~~~~~l~~~~~~~i~~~~~v 317 (336)
T 2yx1_A 270 -A---HKFIDKALDIVEEGGVIHYYTIGKD---FDKAIKLFEKKCDCEVLEKRIV 317 (336)
T ss_dssp -G---GGGHHHHHHHEEEEEEEEEEEEESS---SHHHHHHHHHHSEEEEEEEEEE
T ss_pred -H---HHHHHHHHHHcCCCCEEEEEEeecC---chHHHHHHHHhcCCcEEEEEEE
Confidence 1 2479999999999999988766554 22333444444 5654444433
No 235
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.47 E-value=1.5e-07 Score=91.95 Aligned_cols=87 Identities=9% Similarity=-0.063 Sum_probs=60.1
Q ss_pred CCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhC-----------CCCeeeecccCCCCCCCccchheec
Q 046488 326 IRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRG-----------LVPLYITINQRVPFFDNTLDLIHTT 394 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rg-----------lip~~~~~ae~LPFpd~SFDlV~ss 394 (480)
.++|||||||+|.++..+++++..++.++++ +.....|++. .+.+..+++..+. ++||+|++.
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~~~~v~~veid---~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d 146 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKYDTHIDFVQAD---EKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL 146 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTSSCEEEEECSC---HHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES
T ss_pred CCEEEEEeCCcCHHHHHHHhCCCEEEEEECC---HHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC
Confidence 4689999999999999888776566666655 2222222221 2333445554443 889999985
Q ss_pred ccccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 395 RFLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 395 ~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
. .++. .++.++.|+|||||.+++.
T Consensus 147 ~-----~dp~---~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 147 Q-----EPDI---HRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp S-----CCCH---HHHHHHHTTEEEEEEEEEE
T ss_pred C-----CChH---HHHHHHHHhcCCCcEEEEE
Confidence 2 2342 3899999999999999885
No 236
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.44 E-value=2.3e-06 Score=88.91 Aligned_cols=133 Identities=16% Similarity=0.180 Sum_probs=80.8
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHH----HHHHhCC--CCeeeecccC----CCCCCCccchheeccc
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNE----MIALRGL--VPLYITINQR----VPFFDNTLDLIHTTRF 396 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~----~iA~rgl--ip~~~~~ae~----LPFpd~SFDlV~ss~v 396 (480)
.+|||+|||+|.++..|++.+..+++++.+. .+.. .+...+. +.+..+++.. +|+++++||+|++.--
T Consensus 288 ~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~--~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPP 365 (433)
T 1uwv_A 288 DRVLDLFCGMGNFTLPLATQAASVVGVEGVP--ALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPA 365 (433)
T ss_dssp CEEEEESCTTTTTHHHHHTTSSEEEEEESCH--HHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECCC
T ss_pred CEEEECCCCCCHHHHHHHhhCCEEEEEeCCH--HHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEECCC
Confidence 4899999999999999999888898988763 2222 2222232 3345555444 5678889999997321
Q ss_pred ccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEEEEeeccCC-CCcceeEEEEEEe
Q 046488 397 LDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKWVVVPKRDK-DDREVFFSAVLEK 473 (480)
Q Consensus 397 L~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W~~~~k~d~-~~~E~~lsav~qK 473 (480)
. .....++..+. -++|++.++++ |....+.+-...+...||+-........... ..-|. .++++|
T Consensus 366 r------~g~~~~~~~l~-~~~p~~ivyvs---c~p~tlard~~~l~~~Gy~~~~~~~~d~Fp~t~HvE~--v~ll~r 431 (433)
T 1uwv_A 366 R------AGAAGVMQQII-KLEPIRIVYVS---CNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLES--MVLFSR 431 (433)
T ss_dssp T------TCCHHHHHHHH-HHCCSEEEEEE---SCHHHHHHHHHHHHHTTCEEEEEEEECCSTTSSCCEE--EEEEEC
T ss_pred C------ccHHHHHHHHH-hcCCCeEEEEE---CChHHHHhhHHHHHHCCcEEEEEEEeccCCCCCeEEE--EEEEEE
Confidence 1 11123444444 37999998884 4455554444566667887655444332222 22343 455655
No 237
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.41 E-value=1.8e-06 Score=86.53 Aligned_cols=120 Identities=14% Similarity=0.026 Sum_probs=72.0
Q ss_pred CCeEEEECCCCcHHHHHHhhCC-------CEEEEEecCCChh--HHHHHHHhCC-CCeeeecccCCCCCCCccchheecc
Q 046488 326 IRIGLDFSIGTGTFAARMREFN-------VTLVSAIINLGAP--FNEMIALRGL-VPLYITINQRVPFFDNTLDLIHTTR 395 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~g-------V~Vv~vd~d~~~~--~~~~iA~rgl-ip~~~~~ae~LPFpd~SFDlV~ss~ 395 (480)
..+|||+|||+|.++..++++. ..+++++++...- +...+...+. +.+..+++.. +.+++.||+|+++-
T Consensus 131 ~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~-~~~~~~fD~Ii~NP 209 (344)
T 2f8l_A 131 NVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLA-NLLVDPVDVVISDL 209 (344)
T ss_dssp EEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTS-CCCCCCEEEEEEEC
T ss_pred CCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCC-ccccCCccEEEECC
Confidence 3589999999999998887652 6778888763111 1112222333 2334444322 34568899999986
Q ss_pred cccCccChhc--------------H-HHHHHHHHhcccCCcEEEEee---ccCChhhHHHHHHHHHHcCc
Q 046488 396 FLDGWIDFVL--------------L-DFILYDWDRVLRPGGLLWIDS---FFCAKEDMNDYLEVFKMLKY 447 (480)
Q Consensus 396 vL~h~~d~~~--------------l-~~~L~EI~RVLKPGG~fiI~~---f~~~~edL~~~~~~l~~lGf 447 (480)
-+.++...+. . ..++.++.+.|||||++++.. ++... ....+.+.+...|+
T Consensus 210 Pfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~-~~~~ir~~l~~~~~ 278 (344)
T 2f8l_A 210 PVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTS-DFAKVDKFIKKNGH 278 (344)
T ss_dssp CCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGST-THHHHHHHHHHHEE
T ss_pred CCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCc-hHHHHHHHHHhCCe
Confidence 6544432210 0 147999999999999988763 33222 22444455555444
No 238
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.41 E-value=4.3e-07 Score=89.36 Aligned_cols=95 Identities=13% Similarity=0.106 Sum_probs=61.5
Q ss_pred CeEEEECCCCcHHHHHHhhC-CCEEEEEecCCChhHHH----HHHHhCC---CCeeeecccCCCCCCCcc---chheec-
Q 046488 327 RIGLDFSIGTGTFAARMREF-NVTLVSAIINLGAPFNE----MIALRGL---VPLYITINQRVPFFDNTL---DLIHTT- 394 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~-gV~Vv~vd~d~~~~~~~----~iA~rgl---ip~~~~~ae~LPFpd~SF---DlV~ss- 394 (480)
.+|||+|||+|.++..++.. +..+++++++. .+.. .+...+. +.++.++... +++ ++| |+|+++
T Consensus 125 ~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~--~al~~A~~n~~~~~l~~~v~~~~~D~~~-~~~-~~f~~~D~IvsnP 200 (284)
T 1nv8_A 125 KTVADIGTGSGAIGVSVAKFSDAIVFATDVSS--KAVEIARKNAERHGVSDRFFVRKGEFLE-PFK-EKFASIEMILSNP 200 (284)
T ss_dssp CEEEEESCTTSHHHHHHHHHSSCEEEEEESCH--HHHHHHHHHHHHTTCTTSEEEEESSTTG-GGG-GGTTTCCEEEECC
T ss_pred CEEEEEeCchhHHHHHHHHCCCCEEEEEECCH--HHHHHHHHHHHHcCCCCceEEEECcchh-hcc-cccCCCCEEEEcC
Confidence 37999999999999999987 77888888753 2222 2222232 3344454333 222 589 999996
Q ss_pred -----------ccccCccC------hhcHHHHHHHHH-hcccCCcEEEEee
Q 046488 395 -----------RFLDGWID------FVLLDFILYDWD-RVLRPGGLLWIDS 427 (480)
Q Consensus 395 -----------~vL~h~~d------~~~l~~~L~EI~-RVLKPGG~fiI~~ 427 (480)
.+. |.+. .+. ..++.++. ++|||||++++..
T Consensus 201 Pyi~~~~~l~~~v~-~ep~~al~~~~dg-l~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 201 PYVKSSAHLPKDVL-FEPPEALFGGEDG-LDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp CCBCGGGSCTTSCC-CSCHHHHBCTTTS-CHHHHHHHHHCCCTTCEEEEEC
T ss_pred CCCCcccccChhhc-cCcHHHhcCCCcH-HHHHHHHHHhcCCCCCEEEEEE
Confidence 111 2111 000 15899999 9999999998853
No 239
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.39 E-value=6.6e-09 Score=99.26 Aligned_cols=104 Identities=14% Similarity=0.065 Sum_probs=64.6
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChh--HHHHHHHhCCCCeeeecccCCCCCC-Cccchhee
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAP--FNEMIALRGLVPLYITINQRVPFFD-NTLDLIHT 393 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~--~~~~iA~rglip~~~~~ae~LPFpd-~SFDlV~s 393 (480)
+.+++.++ .+|||+|||+|.++..+++++..+++++++.... +.........+.+..+++..+++++ ++| .|++
T Consensus 23 ~~~~~~~~--~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f-~vv~ 99 (245)
T 1yub_A 23 KQLNLKET--DTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRY-KIVG 99 (245)
T ss_dssp HHCCCCSS--EEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEE-EEEE
T ss_pred HhcCCCCC--CEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCCc-EEEE
Confidence 44455444 4899999999999999999888888888763211 1111110112334556678888874 789 5555
Q ss_pred cc-----------cccCccChhcHHHHH----HHHHhcccCCcEEEEe
Q 046488 394 TR-----------FLDGWIDFVLLDFIL----YDWDRVLRPGGLLWID 426 (480)
Q Consensus 394 s~-----------vL~h~~d~~~l~~~L----~EI~RVLKPGG~fiI~ 426 (480)
+- .+.|+.... .++ .++.|+|||||.+.+.
T Consensus 100 n~Py~~~~~~~~~~~~~~~~~~---~~lm~q~e~a~rll~~~G~l~v~ 144 (245)
T 1yub_A 100 NIPYHLSTQIIKKVVFESRASD---IYLIVEEGFYKRTLDIHRTLGLL 144 (245)
T ss_dssp ECCSSSCHHHHHHHHHHCCCEE---EEEEEESSHHHHHHCGGGSHHHH
T ss_pred eCCccccHHHHHHHHhCCCCCe---EEEEeeHHHHHHHhCCCCchhhh
Confidence 31 112222221 244 6699999999987653
No 240
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.36 E-value=2.1e-06 Score=88.84 Aligned_cols=119 Identities=16% Similarity=0.003 Sum_probs=70.8
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHH----HHHHhCCC-CeeeecccC-CCCCCCccchheecccccCc
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNE----MIALRGLV-PLYITINQR-VPFFDNTLDLIHTTRFLDGW 400 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~----~iA~rgli-p~~~~~ae~-LPFpd~SFDlV~ss~vL~h~ 400 (480)
.+|||+|||||.++..++..|..|+++|++. .+.. .++..+.- .+..+++.. ++...+.||+|++.--....
T Consensus 216 ~~VLDlg~GtG~~sl~~a~~ga~V~avDis~--~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~ 293 (393)
T 4dmg_A 216 ERVLDVYSYVGGFALRAARKGAYALAVDKDL--EALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLVK 293 (393)
T ss_dssp CEEEEESCTTTHHHHHHHHTTCEEEEEESCH--HHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCCS
T ss_pred CeEEEcccchhHHHHHHHHcCCeEEEEECCH--HHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCCC
Confidence 4899999999999999999988888888653 2322 23333432 233344322 33324449999974221000
Q ss_pred cC------hhcHHHHHHHHHhcccCCcEEEEeeccCC--hhhH-HHHHHHHHHcCc
Q 046488 401 ID------FVLLDFILYDWDRVLRPGGLLWIDSFFCA--KEDM-NDYLEVFKMLKY 447 (480)
Q Consensus 401 ~d------~~~l~~~L~EI~RVLKPGG~fiI~~f~~~--~edL-~~~~~~l~~lGf 447 (480)
.. ......++.++.|+|||||++++...... .++. +.+...+...|.
T Consensus 294 ~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~ 349 (393)
T 4dmg_A 294 RPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGR 349 (393)
T ss_dssp SGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCC
Confidence 00 01124688999999999999986543222 2222 334455555554
No 241
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.35 E-value=3.7e-07 Score=87.69 Aligned_cols=61 Identities=8% Similarity=0.046 Sum_probs=43.4
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHh----CCCCeeeecccCCCCCC-Cccc
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALR----GLVPLYITINQRVPFFD-NTLD 389 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~r----glip~~~~~ae~LPFpd-~SFD 389 (480)
.+|||+|||+|.++..|++++..+++++++. .+...+..+ ..+.++.+++..+++++ ..|+
T Consensus 32 ~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~--~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~~~ 97 (244)
T 1qam_A 32 DNIFEIGSGKGHFTLELVQRCNFVTAIEIDH--KLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSYK 97 (244)
T ss_dssp CEEEEECCTTSHHHHHHHHHSSEEEEECSCH--HHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCCE
T ss_pred CEEEEEeCCchHHHHHHHHcCCeEEEEECCH--HHHHHHHHhhccCCCeEEEEChHHhCCcccCCCeE
Confidence 4899999999999999999888888888762 333322221 23445667788888875 4564
No 242
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.34 E-value=1.3e-06 Score=89.54 Aligned_cols=122 Identities=11% Similarity=-0.011 Sum_probs=74.1
Q ss_pred CeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChh--HHHHHHHhCC----CCeeeecccC-CCC---CCCccchheecc
Q 046488 327 RIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAP--FNEMIALRGL----VPLYITINQR-VPF---FDNTLDLIHTTR 395 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~--~~~~iA~rgl----ip~~~~~ae~-LPF---pd~SFDlV~ss~ 395 (480)
.+|||+|||+|.++..++..|. .|++++++..+- +...++..+. +.++.+++.. ++. ..++||+|++.-
T Consensus 214 ~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DP 293 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDP 293 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEECC
Confidence 4899999999999999998775 788888764322 2222333332 2234444332 332 256899999842
Q ss_pred cc-----cCccC-hhcHHHHHHHHHhcccCCcEEEEeeccCC--hhhH-HHHHHHHHHcCce
Q 046488 396 FL-----DGWID-FVLLDFILYDWDRVLRPGGLLWIDSFFCA--KEDM-NDYLEVFKMLKYK 448 (480)
Q Consensus 396 vL-----~h~~d-~~~l~~~L~EI~RVLKPGG~fiI~~f~~~--~edL-~~~~~~l~~lGfk 448 (480)
-. ....+ ...+..++.++.++|+|||++++...... .+.. +.+.+.+...|.+
T Consensus 294 P~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 294 PSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp CCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCCE
T ss_pred CCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCc
Confidence 11 11111 11224577888999999999998753322 2222 3345666677766
No 243
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.34 E-value=5.4e-06 Score=84.05 Aligned_cols=114 Identities=21% Similarity=0.148 Sum_probs=70.1
Q ss_pred CeEEEECCCCcHHHHHHhhC---CCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCCCCccchheeccccc--C--
Q 046488 327 RIGLDFSIGTGTFAARMREF---NVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFDNTLDLIHTTRFLD--G-- 399 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFpd~SFDlV~ss~vL~--h-- 399 (480)
.+|||+|||+|.++..++++ +..+++++++..+.. .| ..+.+..++...++ +++.||+|+++=-+. .
T Consensus 41 ~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~---~a--~~~~~~~~D~~~~~-~~~~fD~Ii~NPPy~~~~~~ 114 (421)
T 2ih2_A 41 GRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALD---LP--PWAEGILADFLLWE-PGEAFDLILGNPPYGIVGEA 114 (421)
T ss_dssp CEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCC---CC--TTEEEEESCGGGCC-CSSCEEEEEECCCCCCBSCT
T ss_pred CEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHH---hC--CCCcEEeCChhhcC-ccCCCCEEEECcCccCcccc
Confidence 38999999999999999874 567888887642211 11 22344555544443 357899999951111 0
Q ss_pred ------ccChh----------------cHHHHHHHHHhcccCCcEEEEee---ccCChhhHHHHHHHHHHcCc
Q 046488 400 ------WIDFV----------------LLDFILYDWDRVLRPGGLLWIDS---FFCAKEDMNDYLEVFKMLKY 447 (480)
Q Consensus 400 ------~~d~~----------------~l~~~L~EI~RVLKPGG~fiI~~---f~~~~edL~~~~~~l~~lGf 447 (480)
+.+.. ....++..+.++|||||++++.. |... ...+.+.+.+...|+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~-~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 115 SKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVL-EDFALLREFLAREGK 186 (421)
T ss_dssp TTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTC-GGGHHHHHHHHHHSE
T ss_pred cccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcC-ccHHHHHHHHHhcCC
Confidence 11110 01256889999999999988752 3322 223445566666666
No 244
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.31 E-value=1.3e-06 Score=86.61 Aligned_cols=119 Identities=17% Similarity=0.194 Sum_probs=76.9
Q ss_pred CCCCCCCeEEEECCCCcHHHHHHhhCC-CEEEEEecCCCh--hHHHHHHHhCC---CCeeeecccCCCCCCCccchheec
Q 046488 321 IKPGEIRIGLDFSIGTGTFAARMREFN-VTLVSAIINLGA--PFNEMIALRGL---VPLYITINQRVPFFDNTLDLIHTT 394 (480)
Q Consensus 321 l~~g~iR~VLDVGCGtG~fAa~Lae~g-V~Vv~vd~d~~~--~~~~~iA~rgl---ip~~~~~ae~LPFpd~SFDlV~ss 394 (480)
+++|+ +|||+|||+|.|+..++.+| ..|++++++..+ -+.+.+...+. +.++.+++..++ ..+.||.|++.
T Consensus 123 ~~~g~--~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~-~~~~~D~Vi~~ 199 (278)
T 3k6r_A 123 AKPDE--LVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP-GENIADRILMG 199 (278)
T ss_dssp CCTTC--EEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-CCSCEEEEEEC
T ss_pred cCCCC--EEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc-cccCCCEEEEC
Confidence 34564 89999999999999999886 578888876321 11223333343 234456666665 36789998864
Q ss_pred ccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCCh----hhHHHHHHHHHHcCcee
Q 046488 395 RFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAK----EDMNDYLEVFKMLKYKK 449 (480)
Q Consensus 395 ~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~----edL~~~~~~l~~lGfkk 449 (480)
.- ... ..++.++.++|||||++.+..+.... +..+.+...++..|++-
T Consensus 200 ~p-----~~~--~~~l~~a~~~lk~gG~ih~~~~~~e~~~~~~~~e~i~~~~~~~g~~v 251 (278)
T 3k6r_A 200 YV-----VRT--HEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDV 251 (278)
T ss_dssp CC-----SSG--GGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEE
T ss_pred CC-----CcH--HHHHHHHHHHcCCCCEEEEEeeecccccchhHHHHHHHHHHHcCCcE
Confidence 21 111 23788889999999998765443222 12355667788888763
No 245
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.29 E-value=1.4e-06 Score=86.31 Aligned_cols=98 Identities=15% Similarity=0.156 Sum_probs=60.2
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHH----HHHhCC--CCeeeecccCCCCCCCccch
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEM----IALRGL--VPLYITINQRVPFFDNTLDL 390 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~----iA~rgl--ip~~~~~ae~LPFpd~SFDl 390 (480)
+.+++.++ .+|||+|||+|.++..|++++..+++++++. .+... ....+. +.++.+++..+++ .+||+
T Consensus 36 ~~~~~~~~--~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~--~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~--~~~D~ 109 (299)
T 2h1r_A 36 YAAKIKSS--DIVLEIGCGTGNLTVKLLPLAKKVITIDIDS--RMISEVKKRCLYEGYNNLEVYEGDAIKTVF--PKFDV 109 (299)
T ss_dssp HHHCCCTT--CEEEEECCTTSTTHHHHTTTSSEEEEECSCH--HHHHHHHHHHHHTTCCCEEC----CCSSCC--CCCSE
T ss_pred HhcCCCCc--CEEEEEcCcCcHHHHHHHhcCCEEEEEECCH--HHHHHHHHHHHHcCCCceEEEECchhhCCc--ccCCE
Confidence 34455444 4899999999999999999888898888763 22222 222222 3344566666665 48999
Q ss_pred heecccccCccChhcHHHHH---------------HHHHhcccCCcE
Q 046488 391 IHTTRFLDGWIDFVLLDFIL---------------YDWDRVLRPGGL 422 (480)
Q Consensus 391 V~ss~vL~h~~d~~~l~~~L---------------~EI~RVLKPGG~ 422 (480)
|+++... +|..+. +..++ ..+.|+++|+|.
T Consensus 110 Vv~n~py-~~~~~~-~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G~ 154 (299)
T 2h1r_A 110 CTANIPY-KISSPL-IFKLISHRPLFKCAVLMFQKEFAERMLANVGD 154 (299)
T ss_dssp EEEECCG-GGHHHH-HHHHHHCSSCCSEEEEEEEHHHHHHHTCCTTS
T ss_pred EEEcCCc-ccccHH-HHHHHhcCCccceeeehHHHHHHHHHhcCCCC
Confidence 9986443 343332 12333 346788888884
No 246
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.28 E-value=9.9e-07 Score=90.13 Aligned_cols=102 Identities=15% Similarity=0.039 Sum_probs=64.0
Q ss_pred CeEEEECCCCcHHHHHHhhCCC-EEEEEecCCCh--hHHHHHHHhCC---CCeeeecccCC-CC---CCCccchheeccc
Q 046488 327 RIGLDFSIGTGTFAARMREFNV-TLVSAIINLGA--PFNEMIALRGL---VPLYITINQRV-PF---FDNTLDLIHTTRF 396 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~--~~~~~iA~rgl---ip~~~~~ae~L-PF---pd~SFDlV~ss~v 396 (480)
.+|||+|||+|.++..++..|. .+++++++..+ .+...+...+. +.++.+++..+ +. .+++||+|++.--
T Consensus 219 ~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP 298 (396)
T 2as0_A 219 DRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDPP 298 (396)
T ss_dssp CEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEECCC
Confidence 4899999999999999999865 78888875311 11122233332 23344443333 21 3679999998421
Q ss_pred ccCccC------hhcHHHHHHHHHhcccCCcEEEEeec
Q 046488 397 LDGWID------FVLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 397 L~h~~d------~~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
...... ......++.++.++|||||++++...
T Consensus 299 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 299 AFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp CSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 111000 01235689999999999999888753
No 247
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.28 E-value=6.8e-07 Score=91.47 Aligned_cols=122 Identities=15% Similarity=-0.050 Sum_probs=72.1
Q ss_pred CeEEEECCCCcHHHHHHhhCCC-EEEEEecCCCh--hHHHHHHHhCC----CCeeeecccCC-CC---CCCccchheecc
Q 046488 327 RIGLDFSIGTGTFAARMREFNV-TLVSAIINLGA--PFNEMIALRGL----VPLYITINQRV-PF---FDNTLDLIHTTR 395 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~--~~~~~iA~rgl----ip~~~~~ae~L-PF---pd~SFDlV~ss~ 395 (480)
.+|||+|||+|.++..++..|. .+++++++..+ .+...+...+. +.++.+++..+ +. .+++||+|++.-
T Consensus 222 ~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dp 301 (396)
T 3c0k_A 222 KRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDP 301 (396)
T ss_dssp CEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEECC
Confidence 4899999999999999999864 78888876311 11122222232 22344443332 21 257899999852
Q ss_pred ccc-----Ccc-ChhcHHHHHHHHHhcccCCcEEEEeeccCC--hhhH-HHHHHHHHHcCce
Q 046488 396 FLD-----GWI-DFVLLDFILYDWDRVLRPGGLLWIDSFFCA--KEDM-NDYLEVFKMLKYK 448 (480)
Q Consensus 396 vL~-----h~~-d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~--~edL-~~~~~~l~~lGfk 448 (480)
-.. ++. .......++.++.++|||||++++...... .++. +.+.+.+...|+.
T Consensus 302 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 363 (396)
T 3c0k_A 302 PKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRD 363 (396)
T ss_dssp SSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCC
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCe
Confidence 110 000 012235689999999999999998643221 2222 3344566666743
No 248
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.27 E-value=8.9e-07 Score=90.26 Aligned_cols=121 Identities=17% Similarity=0.016 Sum_probs=71.4
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCCh--hHHHHHHHhCC--CCeeeecccCC-CC---CCCccchheeccccc
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGA--PFNEMIALRGL--VPLYITINQRV-PF---FDNTLDLIHTTRFLD 398 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~--~~~~~iA~rgl--ip~~~~~ae~L-PF---pd~SFDlV~ss~vL~ 398 (480)
.+|||+|||+|.++..++..+..+++++++..+ .+...+...+. +.++.+++..+ +. .+++||+|++.--..
T Consensus 211 ~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~ 290 (382)
T 1wxx_A 211 ERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPPAF 290 (382)
T ss_dssp EEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred CeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCCCC
Confidence 489999999999999999876677888765211 11122233333 23444444332 21 267999999742111
Q ss_pred CccC------hhcHHHHHHHHHhcccCCcEEEEeeccCC--hhhH-HHHHHHHHHcCc
Q 046488 399 GWID------FVLLDFILYDWDRVLRPGGLLWIDSFFCA--KEDM-NDYLEVFKMLKY 447 (480)
Q Consensus 399 h~~d------~~~l~~~L~EI~RVLKPGG~fiI~~f~~~--~edL-~~~~~~l~~lGf 447 (480)
.... ......++.++.++|||||++++...... .+.. +.+.+.+...|.
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~ 348 (382)
T 1wxx_A 291 AKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHR 348 (382)
T ss_dssp CCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTC
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCC
Confidence 1000 01235689999999999999988753322 2222 234456666653
No 249
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.21 E-value=2.6e-06 Score=88.86 Aligned_cols=105 Identities=15% Similarity=0.187 Sum_probs=64.1
Q ss_pred hhhHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCCh--hHHHHHHHhCC-CCeeeecccCCCCCCCcc
Q 046488 312 DFLIPEVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGA--PFNEMIALRGL-VPLYITINQRVPFFDNTL 388 (480)
Q Consensus 312 d~~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~--~~~~~iA~rgl-ip~~~~~ae~LPFpd~SF 388 (480)
+.++..++.+.++ .+|||+|||+|.++..|++.+..+++++.+..+ .+...+...+. +.+..++++.++. .+|
T Consensus 279 e~l~~~~~~~~~~--~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~--~~f 354 (425)
T 2jjq_A 279 VNLVRKVSELVEG--EKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSV--KGF 354 (425)
T ss_dssp HHHHHHHHHHCCS--SEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCC--TTC
T ss_pred HHHHHHhhccCCC--CEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCc--cCC
Confidence 3344444443333 489999999999999999988889888876311 11112222232 3344555655542 289
Q ss_pred chheecccccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 389 DLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 389 DlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
|+|++.--.... . ..++..+ +.|+|||.++++
T Consensus 355 D~Vv~dPPr~g~---~--~~~~~~l-~~l~p~givyvs 386 (425)
T 2jjq_A 355 DTVIVDPPRAGL---H--PRLVKRL-NREKPGVIVYVS 386 (425)
T ss_dssp SEEEECCCTTCS---C--HHHHHHH-HHHCCSEEEEEE
T ss_pred CEEEEcCCccch---H--HHHHHHH-HhcCCCcEEEEE
Confidence 999974321111 1 2245555 469999999885
No 250
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.19 E-value=2.9e-06 Score=83.40 Aligned_cols=107 Identities=14% Similarity=-0.056 Sum_probs=69.3
Q ss_pred hHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChh-HHHHHHHhCCCCee--eecccCCCCCCCccch
Q 046488 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAP-FNEMIALRGLVPLY--ITINQRVPFFDNTLDL 390 (480)
Q Consensus 314 ~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~-~~~~iA~rglip~~--~~~ae~LPFpd~SFDl 390 (480)
+...++.. +...+|||+|||+|.++..+. .+..++++|++...- .....+...+.+.. +.+...-|. ..+||+
T Consensus 96 fY~~i~~~--~~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~-~~~~Dv 171 (253)
T 3frh_A 96 LYDFIFSA--ETPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPP-AEAGDL 171 (253)
T ss_dssp HHHHHTSS--CCCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCC-CCBCSE
T ss_pred HHHHHhcC--CCCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCC-CCCcch
Confidence 34456666 335689999999999999888 566788888763111 11222333334433 334444444 459999
Q ss_pred heecccccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 391 IHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 391 V~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
|++.-+++++.+... . ...++...|+|+|.++-.
T Consensus 172 vLllk~lh~LE~q~~-~-~~~~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 172 ALIFKLLPLLEREQA-G-SAMALLQSLNTPRMAVSF 205 (253)
T ss_dssp EEEESCHHHHHHHST-T-HHHHHHHHCBCSEEEEEE
T ss_pred HHHHHHHHHhhhhch-h-hHHHHHHHhcCCCEEEEc
Confidence 999877777754332 3 444889999999987754
No 251
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.17 E-value=8.2e-07 Score=98.18 Aligned_cols=116 Identities=18% Similarity=0.106 Sum_probs=71.6
Q ss_pred CeEEEECCCCcHHHHHHhhCCCE-EEEEecCCChhHHH----HHHHhCC----CCeeeeccc-CCCCCCCccchheeccc
Q 046488 327 RIGLDFSIGTGTFAARMREFNVT-LVSAIINLGAPFNE----MIALRGL----VPLYITINQ-RVPFFDNTLDLIHTTRF 396 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~-Vv~vd~d~~~~~~~----~iA~rgl----ip~~~~~ae-~LPFpd~SFDlV~ss~v 396 (480)
.+|||+|||||.++..++..|.. |+++|++. .+.. .++..+. +.++.+++. -++..+++||+|++.--
T Consensus 541 ~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~--~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 541 KDFLNLFSYTGSATVHAGLGGARSTTTVDMSR--TYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCSEEEEEESCH--HHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CcEEEeeechhHHHHHHHHCCCCEEEEEeCCH--HHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 48999999999999999987764 88887653 2222 2333332 223444433 35556789999998421
Q ss_pred -cc-------CccChhcHHHHHHHHHhcccCCcEEEEeeccC-ChhhHHHHHHHHHHcCce
Q 046488 397 -LD-------GWIDFVLLDFILYDWDRVLRPGGLLWIDSFFC-AKEDMNDYLEVFKMLKYK 448 (480)
Q Consensus 397 -L~-------h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~-~~edL~~~~~~l~~lGfk 448 (480)
+. .+........++.++.++|||||+++++.-.. ...+ .+.++..|++
T Consensus 619 ~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~----~~~l~~~g~~ 675 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD----LDGLAKLGLK 675 (703)
T ss_dssp SBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCC----HHHHHHTTEE
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccC----HHHHHHcCCc
Confidence 10 01111123568999999999999999864211 1112 2455666765
No 252
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.12 E-value=2.2e-06 Score=85.26 Aligned_cols=108 Identities=12% Similarity=0.024 Sum_probs=71.2
Q ss_pred hHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHH---HHHHhCCCCeeeec-ccCCCCCCCc
Q 046488 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNE---MIALRGLVPLYITI-NQRVPFFDNT 387 (480)
Q Consensus 314 ~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~---~iA~rglip~~~~~-ae~LPFpd~S 387 (480)
+...++..-+. ..+|||+|||+|-++..++.. ...++++|+|. .+.+ ..+...+++..... -....-+...
T Consensus 122 fY~~i~~~i~~-p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~--~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~ 198 (281)
T 3lcv_B 122 FYRELFRHLPR-PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDA--RLVGFVDEALTRLNVPHRTNVADLLEDRLDEP 198 (281)
T ss_dssp HHHHHGGGSCC-CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBH--HHHHHHHHHHHHTTCCEEEEECCTTTSCCCSC
T ss_pred HHHHHHhccCC-CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCH--HHHHHHHHHHHhcCCCceEEEeeecccCCCCC
Confidence 34445553332 568999999999999988765 45777777763 2322 22233334433322 2233446888
Q ss_pred cchheecccccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 388 LDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 388 FDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
||+|++.-+++++.+... +..+ ++...|+|||.|+-.
T Consensus 199 ~DvaL~lkti~~Le~q~k-g~g~-~ll~aL~~~~vvVSf 235 (281)
T 3lcv_B 199 ADVTLLLKTLPCLETQQR-GSGW-EVIDIVNSPNIVVTF 235 (281)
T ss_dssp CSEEEETTCHHHHHHHST-THHH-HHHHHSSCSEEEEEE
T ss_pred cchHHHHHHHHHhhhhhh-HHHH-HHHHHhCCCCEEEec
Confidence 999999999888765442 3455 999999999998764
No 253
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.04 E-value=5.9e-06 Score=82.52 Aligned_cols=78 Identities=10% Similarity=0.114 Sum_probs=55.7
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCCh--hHHHHHHHhCCCCeeeecccCCCCCCCccchheec
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGA--PFNEMIALRGLVPLYITINQRVPFFDNTLDLIHTT 394 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~--~~~~~iA~rglip~~~~~ae~LPFpd~SFDlV~ss 394 (480)
+.+++.++ .+|||||||+|.++..|++++..+++++++... .+...++....+.++.+++..+++++.+||+|+++
T Consensus 44 ~~l~~~~~--~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~fD~Iv~N 121 (295)
T 3gru_A 44 ESANLTKD--DVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLDFNKVVAN 121 (295)
T ss_dssp HHTTCCTT--CEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSCCSEEEEE
T ss_pred HhcCCCCc--CEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCCccEEEEe
Confidence 34455555 389999999999999999988888888876321 11112222234566778888899999999999976
Q ss_pred cc
Q 046488 395 RF 396 (480)
Q Consensus 395 ~v 396 (480)
..
T Consensus 122 lP 123 (295)
T 3gru_A 122 LP 123 (295)
T ss_dssp CC
T ss_pred Cc
Confidence 44
No 254
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.01 E-value=4.8e-05 Score=76.13 Aligned_cols=161 Identities=16% Similarity=0.172 Sum_probs=85.7
Q ss_pred hhhHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC---CCEEEEEecCCCh--hHHHHHHHhCC--CCeeeecccCCCCC
Q 046488 312 DFLIPEVLDIKPGEIRIGLDFSIGTGTFAARMREF---NVTLVSAIINLGA--PFNEMIALRGL--VPLYITINQRVPFF 384 (480)
Q Consensus 312 d~~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d~~~--~~~~~iA~rgl--ip~~~~~ae~LPFp 384 (480)
..++..+|.+.++. +|||+|||+|..+..+++. ...+++++.+... .....+...|. +.+..+++..++..
T Consensus 91 s~l~~~~l~~~~g~--~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~ 168 (309)
T 2b9e_A 91 SCLPAMLLDPPPGS--HVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPS 168 (309)
T ss_dssp GGHHHHHHCCCTTC--EEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTT
T ss_pred HHHHHHHhCCCCCC--EEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCcc
Confidence 33555677777775 8999999999999999874 3578888765211 11122222243 23344555555543
Q ss_pred C---Cccchheec------ccccCccC--------hhc-------HHHHHHHHHhcccCCcEEEEeec-cCChhhHHHHH
Q 046488 385 D---NTLDLIHTT------RFLDGWID--------FVL-------LDFILYDWDRVLRPGGLLWIDSF-FCAKEDMNDYL 439 (480)
Q Consensus 385 d---~SFDlV~ss------~vL~h~~d--------~~~-------l~~~L~EI~RVLKPGG~fiI~~f-~~~~edL~~~~ 439 (480)
+ ++||.|++. .++...++ ... ...+|..+.+.|+ ||+++.+.- ....+..+.+.
T Consensus 169 ~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~~Ene~~v~ 247 (309)
T 2b9e_A 169 DPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQEENEDVVR 247 (309)
T ss_dssp CGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCGGGTHHHHH
T ss_pred ccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCChHHhHHHHH
Confidence 2 579999962 22221111 011 1236778888887 999887642 11223333344
Q ss_pred HHHHHc-C-ceee----EEEE---------------eeccCCCCcceeEEEEEEeCCCC
Q 046488 440 EVFKML-K-YKKH----KWVV---------------VPKRDKDDREVFFSAVLEKPPRP 477 (480)
Q Consensus 440 ~~l~~l-G-fkkl----~W~~---------------~~k~d~~~~E~~lsav~qKP~~~ 477 (480)
.++++. + |+.. .|.. .+.. ...+.|+.|+++|...+
T Consensus 248 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~--~~~dGfF~A~l~k~~~~ 304 (309)
T 2b9e_A 248 DALQQNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPET--TLSSGFFVAVIERVEVP 304 (309)
T ss_dssp HHHTTSTTTEEECCCCTTCCCBCCSSSTTGGGSEEECHHH--HSSCSEEEEEEEEC---
T ss_pred HHHHhCCCcEEEeccccccccccccccCCCCCeEEECCCC--CCCCCeEEEEEEECCCC
Confidence 455543 2 4322 1210 0000 13478999999986543
No 255
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.01 E-value=1.8e-05 Score=81.73 Aligned_cols=47 Identities=21% Similarity=0.200 Sum_probs=36.3
Q ss_pred CCCCCCCccchheecccccCccC-hh----------------------------------cHHHHHHHHHhcccCCcEEE
Q 046488 380 RVPFFDNTLDLIHTTRFLDGWID-FV----------------------------------LLDFILYDWDRVLRPGGLLW 424 (480)
Q Consensus 380 ~LPFpd~SFDlV~ss~vL~h~~d-~~----------------------------------~l~~~L~EI~RVLKPGG~fi 424 (480)
.-.||++|||+||++.+||.+.+ ++ ++..+|....|.|||||+++
T Consensus 143 ~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL~pGG~mv 222 (374)
T 3b5i_A 143 RRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEVKRGGAMF 222 (374)
T ss_dssp SCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred cccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEE
Confidence 34589999999999999853331 11 23457889999999999999
Q ss_pred Ee
Q 046488 425 ID 426 (480)
Q Consensus 425 I~ 426 (480)
+.
T Consensus 223 l~ 224 (374)
T 3b5i_A 223 LV 224 (374)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 256
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=97.99 E-value=1e-05 Score=84.14 Aligned_cols=110 Identities=15% Similarity=0.062 Sum_probs=65.8
Q ss_pred hHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC---------------CCEEEEEecCCChh--HHHHHHHhCC----CC
Q 046488 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMREF---------------NVTLVSAIINLGAP--FNEMIALRGL----VP 372 (480)
Q Consensus 314 ~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~---------------gV~Vv~vd~d~~~~--~~~~iA~rgl----ip 372 (480)
++-+++...++ .+|||.|||+|.|...++++ +..+.+++++...- +.......+. ..
T Consensus 162 ~mv~~l~~~~~--~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~ 239 (445)
T 2okc_A 162 AMVDCINPQMG--ETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSP 239 (445)
T ss_dssp HHHHHHCCCTT--CCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCS
T ss_pred HHHHHhCCCCC--CEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCC
Confidence 33345543333 47999999999998877653 24577877663111 1111223332 23
Q ss_pred eeeecccCCCCCCCccchheecccccCccChh--------------cHHHHHHHHHhcccCCcEEEEe
Q 046488 373 LYITINQRVPFFDNTLDLIHTTRFLDGWIDFV--------------LLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 373 ~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d~~--------------~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
+..+++...+.. ..||+|+++--+.+..... .-..++..+.+.|||||++++.
T Consensus 240 i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V 306 (445)
T 2okc_A 240 IVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVV 306 (445)
T ss_dssp EEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEE
Confidence 455554444443 4899999975443321100 0025899999999999998765
No 257
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.97 E-value=3.5e-06 Score=84.07 Aligned_cols=145 Identities=12% Similarity=0.019 Sum_probs=80.9
Q ss_pred CCCCCCCCeEEEECCCCcHHHHHHhhC-CCE-EEEEecCCChhHHHHHHHhCCCCe--eeecccCCCCCCCccchheecc
Q 046488 320 DIKPGEIRIGLDFSIGTGTFAARMREF-NVT-LVSAIINLGAPFNEMIALRGLVPL--YITINQRVPFFDNTLDLIHTTR 395 (480)
Q Consensus 320 ~l~~g~iR~VLDVGCGtG~fAa~Lae~-gV~-Vv~vd~d~~~~~~~~iA~rglip~--~~~~ae~LPFpd~SFDlV~ss~ 395 (480)
-++++. +|||+|||+|.|+.+++++ ++. ++++++....+........-...+ ....++-..++++.+|+|+|..
T Consensus 87 ~Lk~~~--~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDm 164 (282)
T 3gcz_A 87 YVKPTG--IVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGDTLLCDI 164 (282)
T ss_dssp SCCCCE--EEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCSEEEECC
T ss_pred CCCCCC--EEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCcCEEEecC
Confidence 355554 8999999999999988864 543 445554311000000000000011 1111233446678999999977
Q ss_pred cccCcc----ChhcHHHHHHHHHhcccCC--cEEEEeeccCChhhHHHHHHHHHHcCceeeEEEEeeccCCCCcceeEEE
Q 046488 396 FLDGWI----DFVLLDFILYDWDRVLRPG--GLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKWVVVPKRDKDDREVFFSA 469 (480)
Q Consensus 396 vL~h~~----d~~~l~~~L~EI~RVLKPG--G~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W~~~~k~d~~~~E~~lsa 469 (480)
+.. .. |......+|.=+.++|||| |.|++--|..-.++...+...+++. |.++.+..- -......|+|+.+
T Consensus 165 Apn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~~l~~~lk~~-F~~V~~~KP-aSR~~S~E~Y~V~ 241 (282)
T 3gcz_A 165 GES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLIMEELSRLQLK-HGGGLVRVP-LSRNSTHEMYWVS 241 (282)
T ss_dssp CCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHHHHHHHHHHHH-HCCEEECCT-TSCTTCCCEEEET
T ss_pred ccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccHHHHHHHHHHh-cCCEEEEcC-CCcccCcceeEEE
Confidence 654 21 2211112455567899999 9998866654344545555555553 776665443 2222567888864
No 258
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.96 E-value=7.7e-05 Score=77.11 Aligned_cols=141 Identities=9% Similarity=-0.005 Sum_probs=84.7
Q ss_pred CCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCCCCccchheecccccCc
Q 046488 321 IKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFDNTLDLIHTTRFLDGW 400 (480)
Q Consensus 321 l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFpd~SFDlV~ss~vL~h~ 400 (480)
+++|. +|||+||.+|+|+..|+++|..|+++|... +...+...+.+....+++..+..+.+.||+|+|..+..
T Consensus 209 l~~G~--~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~---l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~~-- 281 (375)
T 4auk_A 209 LANGM--WAVDLGACPGGWTYQLVKRNMWVYSVDNGP---MAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVEK-- 281 (375)
T ss_dssp SCTTC--EEEEETCTTCHHHHHHHHTTCEEEEECSSC---CCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEECCSSC--
T ss_pred CCCCC--EEEEeCcCCCHHHHHHHHCCCEEEEEEhhh---cChhhccCCCeEEEeCccccccCCCCCcCEEEEcCCCC--
Confidence 44554 899999999999999999999999998653 22333344555555666666666778999999976542
Q ss_pred cChhcHHHHHHHHHhcccCC---cEEEEeeccC-C-hhh----HHHHHHHHHHcCceeeEEEEeeccCCCCcceeEEEEE
Q 046488 401 IDFVLLDFILYDWDRVLRPG---GLLWIDSFFC-A-KED----MNDYLEVFKMLKYKKHKWVVVPKRDKDDREVFFSAVL 471 (480)
Q Consensus 401 ~d~~~l~~~L~EI~RVLKPG---G~fiI~~f~~-~-~ed----L~~~~~~l~~lGfkkl~W~~~~k~d~~~~E~~lsav~ 471 (480)
+. .++.-+.+.|..| +.++...+-- . .+. +..+...++..|+...-. . .+.-.++.|+ ++.+
T Consensus 282 --p~---~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~~l~~~~~~i~~~l~~~g~~~~l~-a-khL~hdReEi--TV~~ 352 (375)
T 4auk_A 282 --PA---KVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQ-A-RQLYHDREEV--TVHV 352 (375)
T ss_dssp --HH---HHHHHHHHHHHTTSCSEEEEEEECCSSSHHHHHHHHHHHHHHHHHHTTCCEEEE-E-ECCTTCSSEE--EEEE
T ss_pred --hH---HhHHHHHHHHhccccceEEEEEEecccchHHHHHHHHHHHHHHHHhcCcchhhe-e-hhhccCCcEE--EEEE
Confidence 22 2444444544444 5443332211 1 122 234556777778763211 1 1111134664 6678
Q ss_pred EeCCCC
Q 046488 472 EKPPRP 477 (480)
Q Consensus 472 qKP~~~ 477 (480)
+||..+
T Consensus 353 rk~~as 358 (375)
T 4auk_A 353 RRIWAA 358 (375)
T ss_dssp EECCC-
T ss_pred Eechhc
Confidence 998763
No 259
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.90 E-value=3.9e-05 Score=77.83 Aligned_cols=115 Identities=13% Similarity=0.083 Sum_probs=65.1
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChh--HHHHHHHhCC--CCeeeecccCC-C-CCC--------------C
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAP--FNEMIALRGL--VPLYITINQRV-P-FFD--------------N 386 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~--~~~~iA~rgl--ip~~~~~ae~L-P-Fpd--------------~ 386 (480)
.+|||+|||+|.++..|++....|++++.+..+- +...++..+. +.++.++++.+ + +.. .
T Consensus 215 ~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~ 294 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSY 294 (369)
T ss_dssp SEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGGC
T ss_pred CEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccccccC
Confidence 4799999999999999998777888887653111 1122223332 22334443332 1 111 4
Q ss_pred ccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEEE
Q 046488 387 TLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKWV 453 (480)
Q Consensus 387 SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W~ 453 (480)
+||+|+.. ++.. -+..++.++|+|+|.+++.. |....+.+-...+.. ||+-....
T Consensus 295 ~fD~Vv~d------PPr~---g~~~~~~~~l~~~g~ivyvs--c~p~t~ard~~~l~~-~y~~~~~~ 349 (369)
T 3bt7_A 295 QCETIFVD------PPRS---GLDSETEKMVQAYPRILYIS--CNPETLCKNLETLSQ-THKVERLA 349 (369)
T ss_dssp CEEEEEEC------CCTT---CCCHHHHHHHTTSSEEEEEE--SCHHHHHHHHHHHHH-HEEEEEEE
T ss_pred CCCEEEEC------cCcc---ccHHHHHHHHhCCCEEEEEE--CCHHHHHHHHHHHhh-CcEEEEEE
Confidence 79999852 1111 14567888888999987753 344444322222332 56544433
No 260
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.88 E-value=8.4e-05 Score=77.03 Aligned_cols=49 Identities=16% Similarity=0.242 Sum_probs=34.9
Q ss_pred ccCCCCCCCccchheecccccCcc-Ch-hcH-----------------------------------HHHHHHHHhcccCC
Q 046488 378 NQRVPFFDNTLDLIHTTRFLDGWI-DF-VLL-----------------------------------DFILYDWDRVLRPG 420 (480)
Q Consensus 378 ae~LPFpd~SFDlV~ss~vL~h~~-d~-~~l-----------------------------------~~~L~EI~RVLKPG 420 (480)
...-.||++|||+||++.+|| |. +. +.+ ..+|.-..|+||||
T Consensus 140 Fy~rlfp~~S~d~v~Ss~aLH-Wls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL~pG 218 (384)
T 2efj_A 140 FYSRLFPEESMHFLHSCYCLH-WLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEELISR 218 (384)
T ss_dssp TTSCCSCTTCEEEEEEESCTT-BCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred hhhccCCCCceEEEEecceee-ecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 445678999999999999985 63 21 111 11255558999999
Q ss_pred cEEEEee
Q 046488 421 GLLWIDS 427 (480)
Q Consensus 421 G~fiI~~ 427 (480)
|++++.-
T Consensus 219 G~mvl~~ 225 (384)
T 2efj_A 219 GRMLLTF 225 (384)
T ss_dssp EEEEEEE
T ss_pred CeEEEEE
Confidence 9999874
No 261
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=97.84 E-value=8.6e-05 Score=76.49 Aligned_cols=145 Identities=12% Similarity=-0.022 Sum_probs=78.7
Q ss_pred CCCeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChhHHHHHHHhCC---------------CCeeeecccCC-C---CC
Q 046488 325 EIRIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNEMIALRGL---------------VPLYITINQRV-P---FF 384 (480)
Q Consensus 325 ~iR~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~~~~~iA~rgl---------------ip~~~~~ae~L-P---Fp 384 (480)
..++|||||||+|.++..+++++. .++.++++ +.....|++.. +.++.+++..+ . -.
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID---~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~ 264 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEID---QMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 264 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESC---HHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECC---HHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhcc
Confidence 457999999999999999988753 56666665 33344443321 22333442221 1 13
Q ss_pred CCccchheecccccCcc-Chh--cHHHHHHHH----HhcccCCcEEEEeeccCChhh-HHHHHHHHHHcCceeeEEEE-e
Q 046488 385 DNTLDLIHTTRFLDGWI-DFV--LLDFILYDW----DRVLRPGGLLWIDSFFCAKED-MNDYLEVFKMLKYKKHKWVV-V 455 (480)
Q Consensus 385 d~SFDlV~ss~vL~h~~-d~~--~l~~~L~EI----~RVLKPGG~fiI~~f~~~~ed-L~~~~~~l~~lGfkkl~W~~-~ 455 (480)
++.||+|++.-.-.+.. .+. .-..++.++ .|+|+|||.+++..-.....+ +..+...++++ |..+.... .
T Consensus 265 ~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~~~l~~~-F~~v~~~~~~ 343 (364)
T 2qfm_A 265 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRL-YCPVEFSKEI 343 (364)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTS-SSCEEEEEEE
T ss_pred CCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHHHh-CCceEEeeEe
Confidence 67899999753220111 110 002456666 899999999988632211222 33344445553 66665521 1
Q ss_pred eccCCCCcceeEEEEEEe
Q 046488 456 PKRDKDDREVFFSAVLEK 473 (480)
Q Consensus 456 ~k~d~~~~E~~lsav~qK 473 (480)
.-...=.+.|.+..+|+|
T Consensus 344 ~~vPsy~~~w~f~~~~k~ 361 (364)
T 2qfm_A 344 VCVPSYLELWVFYTVWKK 361 (364)
T ss_dssp ECCGGGSSCEEEEEEEEC
T ss_pred eecCCchhheEeEEeecc
Confidence 111111125666666655
No 262
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.77 E-value=4.8e-05 Score=76.41 Aligned_cols=140 Identities=11% Similarity=0.064 Sum_probs=76.9
Q ss_pred CCeEEEECCCCcHHHHHHhhC-CCE-EEEEecCCCh---hHHHHHHHhCCCCeeeecccCCCCCCCccchheecccccCc
Q 046488 326 IRIGLDFSIGTGTFAARMREF-NVT-LVSAIINLGA---PFNEMIALRGLVPLYITINQRVPFFDNTLDLIHTTRFLDGW 400 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~-gV~-Vv~vd~d~~~---~~~~~iA~rglip~~~~~ae~LPFpd~SFDlV~ss~vL~h~ 400 (480)
.++|||+||++|+|+..++++ ++. ++++++.... +...+......+. .....+-.-+..+.+|+|+|..+-. -
T Consensus 82 g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~-~~~~~di~~l~~~~~DlVlsD~APn-s 159 (300)
T 3eld_A 82 TGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVK-FKDKSNVFTMPTEPSDTLLCDIGES-S 159 (300)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEE-EECSCCTTTSCCCCCSEEEECCCCC-C
T ss_pred CCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEE-eecCceeeecCCCCcCEEeecCcCC-C
Confidence 358999999999999999985 543 4455442110 0000000000000 1111223345678999999976544 2
Q ss_pred c----ChhcHHHHHHHHHhcccCC-cEEEEeeccCChhhHHHHHHHHHHcCceeeEEEEeeccCCCCcceeEEE
Q 046488 401 I----DFVLLDFILYDWDRVLRPG-GLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKWVVVPKRDKDDREVFFSA 469 (480)
Q Consensus 401 ~----d~~~l~~~L~EI~RVLKPG-G~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W~~~~k~d~~~~E~~lsa 469 (480)
. |......+|.=+.++|||| |.|++--|..-.++...+...+++. |..+.+..- -......|+|+..
T Consensus 160 G~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~~ll~~lk~~-F~~V~~~KP-aSR~~S~E~Y~V~ 231 (300)
T 3eld_A 160 SNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLERLQLR-FGGGIVRVP-FSRNSTHEMYYIS 231 (300)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHHHHHHHHHHH-HCCEEECCT-TSCTTCCCEEEES
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHHHHHHHHHHh-CCcEEEEeC-CCCCCChHHeeec
Confidence 1 1111122455557899999 9999876654344545555555553 676665443 2222457888753
No 263
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.71 E-value=5.7e-05 Score=73.60 Aligned_cols=73 Identities=10% Similarity=0.120 Sum_probs=49.7
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHh----CCCCeeeecccCCCCCC----Ccc
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALR----GLVPLYITINQRVPFFD----NTL 388 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~r----glip~~~~~ae~LPFpd----~SF 388 (480)
+.+++.++ .+|||||||+|.++..|++++..+++++++. .+...+..+ ..+.++.+++..+++++ +.|
T Consensus 23 ~~~~~~~~--~~VLEIG~G~G~lt~~La~~~~~V~avEid~--~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~ 98 (255)
T 3tqs_A 23 SAIHPQKT--DTLVEIGPGRGALTDYLLTECDNLALVEIDR--DLVAFLQKKYNQQKNITIYQNDALQFDFSSVKTDKPL 98 (255)
T ss_dssp HHHCCCTT--CEEEEECCTTTTTHHHHTTTSSEEEEEECCH--HHHHHHHHHHTTCTTEEEEESCTTTCCGGGSCCSSCE
T ss_pred HhcCCCCc--CEEEEEcccccHHHHHHHHhCCEEEEEECCH--HHHHHHHHHHhhCCCcEEEEcchHhCCHHHhccCCCe
Confidence 44455555 4899999999999999999988888888763 333322211 23456677788887754 568
Q ss_pred chheec
Q 046488 389 DLIHTT 394 (480)
Q Consensus 389 DlV~ss 394 (480)
| |+++
T Consensus 99 ~-vv~N 103 (255)
T 3tqs_A 99 R-VVGN 103 (255)
T ss_dssp E-EEEE
T ss_pred E-EEec
Confidence 8 4443
No 264
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=97.68 E-value=5.1e-05 Score=78.33 Aligned_cols=99 Identities=11% Similarity=0.040 Sum_probs=62.7
Q ss_pred CeEEEECCCCcHHHHHHhhC--C--------------------------------------CEEEEEecCCCh--hHHHH
Q 046488 327 RIGLDFSIGTGTFAARMREF--N--------------------------------------VTLVSAIINLGA--PFNEM 364 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~--g--------------------------------------V~Vv~vd~d~~~--~~~~~ 364 (480)
..|||.+||+|+++..++.. + ..++++|.+..+ .+...
T Consensus 203 ~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~N 282 (393)
T 3k0b_A 203 RPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQN 282 (393)
T ss_dssp SCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHH
T ss_pred CeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHHH
Confidence 57999999999998776653 2 347888766311 11122
Q ss_pred HHHhCC---CCeeeecccCCCCCCCccchheeccccc-CccChhcHHHHHHHHHhcccC--CcEEEEe
Q 046488 365 IALRGL---VPLYITINQRVPFFDNTLDLIHTTRFLD-GWIDFVLLDFILYDWDRVLRP--GGLLWID 426 (480)
Q Consensus 365 iA~rgl---ip~~~~~ae~LPFpd~SFDlV~ss~vL~-h~~d~~~l~~~L~EI~RVLKP--GG~fiI~ 426 (480)
+...|. +.+..+++..++.+ .+||+|+++--+. .+.+...+..++.++.++||+ ||.+++.
T Consensus 283 a~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ii 349 (393)
T 3k0b_A 283 AVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVL 349 (393)
T ss_dssp HHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEE
T ss_pred HHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEE
Confidence 233333 44566777777765 4899999872221 122223345677888888887 8888774
No 265
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.62 E-value=7.6e-05 Score=73.56 Aligned_cols=75 Identities=13% Similarity=0.074 Sum_probs=52.1
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHh---CCCCeeeecccCCCCCCC-ccchhe
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALR---GLVPLYITINQRVPFFDN-TLDLIH 392 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~r---glip~~~~~ae~LPFpd~-SFDlV~ 392 (480)
+.+++.++ +|||||||+|.++..|++++..+++++++. .+......+ ..+.++.+++..+++++. .||.|+
T Consensus 41 ~~~~~~~~---~VLEIG~G~G~lt~~L~~~~~~V~avEid~--~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~~~iv 115 (271)
T 3fut_A 41 EAARPFTG---PVFEVGPGLGALTRALLEAGAEVTAIEKDL--RLRPVLEETLSGLPVRLVFQDALLYPWEEVPQGSLLV 115 (271)
T ss_dssp HHHCCCCS---CEEEECCTTSHHHHHHHHTTCCEEEEESCG--GGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTTEEEE
T ss_pred HhcCCCCC---eEEEEeCchHHHHHHHHHcCCEEEEEECCH--HHHHHHHHhcCCCCEEEEECChhhCChhhccCccEEE
Confidence 34445444 799999999999999999988888888763 333322221 234566777888888753 688888
Q ss_pred eccc
Q 046488 393 TTRF 396 (480)
Q Consensus 393 ss~v 396 (480)
++.-
T Consensus 116 ~NlP 119 (271)
T 3fut_A 116 ANLP 119 (271)
T ss_dssp EEEC
T ss_pred ecCc
Confidence 7643
No 266
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.62 E-value=8.1e-05 Score=76.47 Aligned_cols=48 Identities=25% Similarity=0.299 Sum_probs=36.8
Q ss_pred ccCCCCCCCccchheecccccCccCh-------------------------------hcHHHHHHHHHhcccCCcEEEEe
Q 046488 378 NQRVPFFDNTLDLIHTTRFLDGWIDF-------------------------------VLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 378 ae~LPFpd~SFDlV~ss~vL~h~~d~-------------------------------~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
...-.||++|||+||++.+|| |... .++..+|.-..|.|+|||++++.
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLH-Wls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~ 208 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLM-WLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLT 208 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTT-BCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEE
T ss_pred hhhccCCCCceEEEEehhhhh-hcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 445789999999999999985 5321 01234588889999999999886
No 267
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=97.61 E-value=8.2e-05 Score=76.50 Aligned_cols=100 Identities=12% Similarity=0.064 Sum_probs=64.3
Q ss_pred CCeEEEECCCCcHHHHHHhhCC----------------------------------------CEEEEEecCCCh--hHHH
Q 046488 326 IRIGLDFSIGTGTFAARMREFN----------------------------------------VTLVSAIINLGA--PFNE 363 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~g----------------------------------------V~Vv~vd~d~~~--~~~~ 363 (480)
...|||.+||+|+|+..++..+ ..++++|.+..+ .+..
T Consensus 196 ~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~ 275 (385)
T 3ldu_A 196 GRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARE 275 (385)
T ss_dssp TSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHH
Confidence 3579999999999988776542 457888776311 1122
Q ss_pred HHHHhCC---CCeeeecccCCCCCCCccchheeccccc-CccChhcHHHHHHHHHhcccC--CcEEEEe
Q 046488 364 MIALRGL---VPLYITINQRVPFFDNTLDLIHTTRFLD-GWIDFVLLDFILYDWDRVLRP--GGLLWID 426 (480)
Q Consensus 364 ~iA~rgl---ip~~~~~ae~LPFpd~SFDlV~ss~vL~-h~~d~~~l~~~L~EI~RVLKP--GG~fiI~ 426 (480)
.+...|. +.+..+++..++.+ .+||+|+++--+. .+.+...+..++.++.++||+ ||.+++.
T Consensus 276 Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ii 343 (385)
T 3ldu_A 276 NAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLI 343 (385)
T ss_dssp HHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEE
T ss_pred HHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEE
Confidence 2233343 34455667777764 5899999854332 122233456788888889987 8888774
No 268
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.58 E-value=4.7e-05 Score=74.18 Aligned_cols=83 Identities=14% Similarity=0.106 Sum_probs=52.2
Q ss_pred hHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCC-h----hHHHHHHHh--------CCCCeeeecccC
Q 046488 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLG-A----PFNEMIALR--------GLVPLYITINQR 380 (480)
Q Consensus 314 ~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~-~----~~~~~iA~r--------glip~~~~~ae~ 380 (480)
.+.+.+.+.++ .+|||+|||+|.++..|++.+..|++++.+.. + .+. ..|.+ ..+.++.++++.
T Consensus 74 ~l~~a~~~~~~--~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l-~~a~~n~~~~~~~~ri~~~~~d~~~ 150 (258)
T 2r6z_A 74 LIAKAVNHTAH--PTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGI-RRALLNPETQDTAARINLHFGNAAE 150 (258)
T ss_dssp HHHHHTTGGGC--CCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHH-HHHHHSHHHHHHHTTEEEEESCHHH
T ss_pred HHHHHhCcCCc--CeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHH-HHHHhHHHhhCCccCeEEEECCHHH
Confidence 44455544333 37999999999999999999888888887620 0 222 22221 224455565444
Q ss_pred -CC-CCC--CccchheecccccC
Q 046488 381 -VP-FFD--NTLDLIHTTRFLDG 399 (480)
Q Consensus 381 -LP-Fpd--~SFDlV~ss~vL~h 399 (480)
++ +++ ++||+|++.-.+.+
T Consensus 151 ~l~~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 151 QMPALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHHHHHHCCCSEEEECCCC--
T ss_pred HHHhhhccCCCccEEEECCCCCC
Confidence 34 455 89999998765543
No 269
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.57 E-value=0.00027 Score=69.90 Aligned_cols=138 Identities=12% Similarity=-0.048 Sum_probs=74.2
Q ss_pred CCCCCCCeEEEECCCCcHHHHHHhhC-CC-EEEEEe--cCC-ChhHHHHHHHhCCCCeee---e-cccCCCCCCCccchh
Q 046488 321 IKPGEIRIGLDFSIGTGTFAARMREF-NV-TLVSAI--INL-GAPFNEMIALRGLVPLYI---T-INQRVPFFDNTLDLI 391 (480)
Q Consensus 321 l~~g~iR~VLDVGCGtG~fAa~Lae~-gV-~Vv~vd--~d~-~~~~~~~iA~rglip~~~---~-~ae~LPFpd~SFDlV 391 (480)
++++. +|||+||+.|+|+.+.+++ ++ .+.+.+ .+. ..++.. .--++.++. + +... ..+..+|+|
T Consensus 71 ikpg~--~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~---~~~Gv~~i~~~~G~Df~~--~~~~~~DvV 143 (269)
T 2px2_A 71 VQPIG--KVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM---QSYGWNIVTMKSGVDVFY--KPSEISDTL 143 (269)
T ss_dssp CCCCE--EEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC---CSTTGGGEEEECSCCGGG--SCCCCCSEE
T ss_pred CCCCC--EEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcc---cCCCceEEEeeccCCccC--CCCCCCCEE
Confidence 55664 8999999999999999986 44 222332 220 011100 001112221 3 3333 335689999
Q ss_pred eecccccCcc----ChhcHHHHHHHHHhcccCCc-EEEEeeccCChhhHHHHHHHHHHcCceeeEEEEeeccCC-CCcce
Q 046488 392 HTTRFLDGWI----DFVLLDFILYDWDRVLRPGG-LLWIDSFFCAKEDMNDYLEVFKMLKYKKHKWVVVPKRDK-DDREV 465 (480)
Q Consensus 392 ~ss~vL~h~~----d~~~l~~~L~EI~RVLKPGG-~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W~~~~k~d~-~~~E~ 465 (480)
+|..+=. -. |......+|.=+.++|+||| .|++-.|....++..++.+.+++. |..++- ...... ...|+
T Consensus 144 LSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg~~~~~~~~l~~lk~~-F~~vkv--k~paSR~~S~E~ 219 (269)
T 2px2_A 144 LCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCPYMPKVIEKLESLQRR-FGGGLV--RVPLSRNSNHEM 219 (269)
T ss_dssp EECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHHHHHHHH-HCCEEE--CCTTSCTTCCCE
T ss_pred EeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCCCchHHHHHHHHHHHH-cCCEEE--ECCCCCCCCccE
Confidence 9865432 11 11111124544558999999 888866663335555544444443 666552 222222 55798
Q ss_pred eEEE
Q 046488 466 FFSA 469 (480)
Q Consensus 466 ~lsa 469 (480)
|+.+
T Consensus 220 YlVa 223 (269)
T 2px2_A 220 YWVS 223 (269)
T ss_dssp EEET
T ss_pred EEEe
Confidence 8864
No 270
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.57 E-value=0.00014 Score=75.08 Aligned_cols=98 Identities=15% Similarity=0.060 Sum_probs=63.5
Q ss_pred CeEEEECCCCcHHHHHHhhC--C--------------------------------------CEEEEEecCCCh--hHHHH
Q 046488 327 RIGLDFSIGTGTFAARMREF--N--------------------------------------VTLVSAIINLGA--PFNEM 364 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~--g--------------------------------------V~Vv~vd~d~~~--~~~~~ 364 (480)
..+||.+||+|+++..++.. + ..++++|.+..+ .+...
T Consensus 196 ~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~N 275 (384)
T 3ldg_A 196 KPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARKN 275 (384)
T ss_dssp SCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHH
T ss_pred CeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHHH
Confidence 57999999999998776643 2 347888766311 11122
Q ss_pred HHHhCC---CCeeeecccCCCCCCCccchheec--ccccCccChhcHHHHHHHHHhcccC--CcEEEEe
Q 046488 365 IALRGL---VPLYITINQRVPFFDNTLDLIHTT--RFLDGWIDFVLLDFILYDWDRVLRP--GGLLWID 426 (480)
Q Consensus 365 iA~rgl---ip~~~~~ae~LPFpd~SFDlV~ss--~vL~h~~d~~~l~~~L~EI~RVLKP--GG~fiI~ 426 (480)
+...|. +.+..+++..++.+ .+||+|+++ +... +.+...+..++.++.++||+ ||.+++.
T Consensus 276 a~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~r-l~~~~~l~~ly~~lg~~lk~~~g~~~~ii 342 (384)
T 3ldg_A 276 AREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGER-LLDDKAVDILYNEMGETFAPLKTWSQFIL 342 (384)
T ss_dssp HHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTT-TSCHHHHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred HHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhc-cCCHHHHHHHHHHHHHHHhhCCCcEEEEE
Confidence 223343 34555667777765 489999986 3221 33334456788888888887 9988774
No 271
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.46 E-value=5.8e-05 Score=74.03 Aligned_cols=104 Identities=10% Similarity=-0.058 Sum_probs=63.1
Q ss_pred hhHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCCh-----hHHHHHHHh---------CCCCeeeecc
Q 046488 313 FLIPEVLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGA-----PFNEMIALR---------GLVPLYITIN 378 (480)
Q Consensus 313 ~~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~-----~~~~~iA~r---------glip~~~~~a 378 (480)
..+.+.+.+.++...+|||+|||+|..+..++++|..|++++.+... ..... +.+ ..+.++.+++
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~-a~~~~~~~~~l~~~i~~~~~D~ 154 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLAR-GYADAEIGGWLQERLQLIHASS 154 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHH-HHHCTTTHHHHHHHEEEEESCH
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHH-HHhhHhhhhhhhcCEEEEECCH
Confidence 34556777766522489999999999999999988889888865310 01111 111 1133455553
Q ss_pred cC-CCCCCCccchheecccccCccChhcHHHHHHHHHhcccCCc
Q 046488 379 QR-VPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGG 421 (480)
Q Consensus 379 e~-LPFpd~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG 421 (480)
.. ++.....||+|++.-.+.+ ... ..++.+..|+||+.+
T Consensus 155 ~~~L~~~~~~fDvV~lDP~y~~-~~~---saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 155 LTALTDITPRPQVVYLDPMFPH-KQK---SALVKKEMRVFQSLV 194 (258)
T ss_dssp HHHSTTCSSCCSEEEECCCCCC-CCC--------HHHHHHHHHS
T ss_pred HHHHHhCcccCCEEEEcCCCCC-ccc---chHHHHHHHHHHHhh
Confidence 33 4433347999998765543 222 347788889998876
No 272
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.39 E-value=0.0004 Score=67.15 Aligned_cols=65 Identities=15% Similarity=0.112 Sum_probs=44.3
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhCC-CEEEEEecCCChhHHHHHHHhC---CCCeeeecccCCCCCCC
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREFN-VTLVSAIINLGAPFNEMIALRG---LVPLYITINQRVPFFDN 386 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~g-V~Vv~vd~d~~~~~~~~iA~rg---lip~~~~~ae~LPFpd~ 386 (480)
+.+++.++ .+|||||||+|.++..|++++ ..+++++++ +.....+.+. .+.++.+++..+++++.
T Consensus 25 ~~~~~~~~--~~VLDiG~G~G~lt~~L~~~~~~~v~avEid---~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~ 93 (249)
T 3ftd_A 25 EELNIEEG--NTVVEVGGGTGNLTKVLLQHPLKKLYVIELD---REMVENLKSIGDERLEVINEDASKFPFCSL 93 (249)
T ss_dssp HHTTCCTT--CEEEEEESCHHHHHHHHTTSCCSEEEEECCC---HHHHHHHTTSCCTTEEEECSCTTTCCGGGS
T ss_pred HhcCCCCc--CEEEEEcCchHHHHHHHHHcCCCeEEEEECC---HHHHHHHHhccCCCeEEEEcchhhCChhHc
Confidence 34444444 489999999999999999985 788888876 2333333332 23455677888888753
No 273
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.38 E-value=5.9e-05 Score=77.57 Aligned_cols=93 Identities=17% Similarity=0.045 Sum_probs=58.8
Q ss_pred CeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChh--HHHHHHHh---------------CC--CCeeeecccCCC-CC
Q 046488 327 RIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAP--FNEMIALR---------------GL--VPLYITINQRVP-FF 384 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~--~~~~iA~r---------------gl--ip~~~~~ae~LP-Fp 384 (480)
.+|||+|||+|.++..++++ +..+++++.+..+- +...+... +. +.++.+++..+. ..
T Consensus 49 ~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~~ 128 (378)
T 2dul_A 49 KIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAER 128 (378)
T ss_dssp SEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHHS
T ss_pred CEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHhc
Confidence 48999999999999999886 46788887663211 11223333 32 223344433221 11
Q ss_pred CCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 385 DNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 385 d~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
.+.||+|+.. ..... ..++..+.+.|||||+++++
T Consensus 129 ~~~fD~I~lD----P~~~~---~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 129 HRYFHFIDLD----PFGSP---MEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp TTCEEEEEEC----CSSCC---HHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCCEEEeC----CCCCH---HHHHHHHHHhcCCCCEEEEE
Confidence 4679999942 21121 35889999999999998876
No 274
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.26 E-value=0.0003 Score=77.24 Aligned_cols=98 Identities=15% Similarity=0.125 Sum_probs=60.0
Q ss_pred CCCeEEEECCCCcHH---HHHHhhC-C--CEEEEEecCCChhH-HHHHHHhCC---CCeeeecccCCCCCCCccchheec
Q 046488 325 EIRIGLDFSIGTGTF---AARMREF-N--VTLVSAIINLGAPF-NEMIALRGL---VPLYITINQRVPFFDNTLDLIHTT 394 (480)
Q Consensus 325 ~iR~VLDVGCGtG~f---Aa~Lae~-g--V~Vv~vd~d~~~~~-~~~iA~rgl---ip~~~~~ae~LPFpd~SFDlV~ss 394 (480)
...+|||||||+|-+ +...+++ + +.|.++.-+..+.. ...+...+. |.++.+..+.+-.| +.+|+|++-
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVSE 435 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVSE 435 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEECC
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEEE
Confidence 345799999999987 4444443 3 35666664422221 222233332 55667777877655 679999983
Q ss_pred ccccCccChhcHHHHHHHHHhcccCCcEEE
Q 046488 395 RFLDGWIDFVLLDFILYDWDRVLRPGGLLW 424 (480)
Q Consensus 395 ~vL~h~~d~~~l~~~L~EI~RVLKPGG~fi 424 (480)
.. ......+.+..++.-.+|.|||||.++
T Consensus 436 wM-G~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 436 LL-GSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CC-BTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred cC-cccccccCCHHHHHHHHHhcCCCcEEc
Confidence 32 222223333457888899999999865
No 275
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.25 E-value=0.0003 Score=75.48 Aligned_cols=107 Identities=13% Similarity=0.074 Sum_probs=64.0
Q ss_pred hHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC--------------------CCEEEEEecCCChhHHHHHHH-----h
Q 046488 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMREF--------------------NVTLVSAIINLGAPFNEMIAL-----R 368 (480)
Q Consensus 314 ~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~--------------------gV~Vv~vd~d~~~~~~~~iA~-----r 368 (480)
++-+++...++ .+|||.+||+|.|...++++ ...+.+++++. ....+|+ .
T Consensus 160 ~mv~~l~p~~~--~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~---~~~~lA~~nl~l~ 234 (541)
T 2ar0_A 160 TIIHLLKPQPR--EVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVP---GTRRLALMNCLLH 234 (541)
T ss_dssp HHHHHHCCCTT--CCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCH---HHHHHHHHHHHTT
T ss_pred HHHHHhccCCC--CeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCH---HHHHHHHHHHHHh
Confidence 33455544444 47999999999998776542 13577887763 2222322 2
Q ss_pred CC-------CCeeeecccCC-CCCCCccchheecccccC--cc----------ChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 369 GL-------VPLYITINQRV-PFFDNTLDLIHTTRFLDG--WI----------DFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 369 gl-------ip~~~~~ae~L-PFpd~SFDlV~ss~vL~h--~~----------d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
+. ..+..+++-.. ++..+.||+|+++=-+.. +. .... ..++..+.+.|||||++.+.
T Consensus 235 gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~-~~Fl~~~l~~Lk~gGr~a~V 311 (541)
T 2ar0_A 235 DIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQ-LCFMQHIIETLHPGGRAAVV 311 (541)
T ss_dssp TCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHH-HHHHHHHHHHEEEEEEEEEE
T ss_pred CCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchH-HHHHHHHHHHhCCCCEEEEE
Confidence 32 23344443222 245678999998633221 11 0111 35889999999999998775
No 276
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.21 E-value=0.00033 Score=77.70 Aligned_cols=98 Identities=16% Similarity=0.095 Sum_probs=61.6
Q ss_pred CCeEEEECCCCcHHHH---HHh---h---------CCCEEEEEecCCChh-HHHHHHHhC---CCCeeeecccCCCCC--
Q 046488 326 IRIGLDFSIGTGTFAA---RMR---E---------FNVTLVSAIINLGAP-FNEMIALRG---LVPLYITINQRVPFF-- 384 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa---~La---e---------~gV~Vv~vd~d~~~~-~~~~iA~rg---lip~~~~~ae~LPFp-- 384 (480)
...|||||||+|.+.. ..+ . ..+.|++++.+..+. .+......+ .+.++.+..+.+..+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 3589999999999842 222 1 123677776542111 122222233 366677778877764
Q ss_pred ---CCccchheecccccCccChhcHHHHHHHHHhcccCCcEEE
Q 046488 385 ---DNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLW 424 (480)
Q Consensus 385 ---d~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fi 424 (480)
.+.+|+|++-.. -...+.+.....|.-+.|.|||||.++
T Consensus 490 ~~~~ekVDIIVSElm-Gsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 490 DRGFEQPDIIVSELL-GSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HTTCCCCSEEEECCC-BTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cCCCCcccEEEEecc-ccccchhccHHHHHHHHHhCCCCcEEE
Confidence 688999998433 223344434567888899999999865
No 277
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.20 E-value=0.00052 Score=67.00 Aligned_cols=57 Identities=16% Similarity=0.128 Sum_probs=35.2
Q ss_pred ccchheecccccCccChhc-HHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceee
Q 046488 387 TLDLIHTTRFLDGWIDFVL-LDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKH 450 (480)
Q Consensus 387 SFDlV~ss~vL~h~~d~~~-l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl 450 (480)
.||+|+... +..-..++. -..+|.++.|+|||||+|+. |... . .+...+...||...
T Consensus 173 ~~D~iflD~-fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t--ysaa-~---~vrr~L~~aGF~v~ 230 (257)
T 2qy6_A 173 KVDAWFLDG-FAPAKNPDMWTQNLFNAMARLARPGGTLAT--FTSA-G---FVRRGLQEAGFTMQ 230 (257)
T ss_dssp CEEEEEECS-SCTTTCGGGCCHHHHHHHHHHEEEEEEEEE--SCCB-H---HHHHHHHHHTEEEE
T ss_pred eEEEEEECC-CCcccChhhcCHHHHHHHHHHcCCCcEEEE--EeCC-H---HHHHHHHHCCCEEE
Confidence 799999732 221111110 14589999999999999774 3322 2 34456667799743
No 278
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.18 E-value=0.00027 Score=69.77 Aligned_cols=65 Identities=14% Similarity=0.107 Sum_probs=43.9
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCE----EEEEecCCChhHHHHHHHh--CCCCeeeecccCCCCCC
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREFNVT----LVSAIINLGAPFNEMIALR--GLVPLYITINQRVPFFD 385 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~----Vv~vd~d~~~~~~~~iA~r--glip~~~~~ae~LPFpd 385 (480)
+.+++.++ .+|||||||+|.++..|++++.. +++++++. .+......+ ..+.++.+++..++|++
T Consensus 36 ~~~~~~~~--~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~--~~l~~a~~~~~~~v~~i~~D~~~~~~~~ 106 (279)
T 3uzu_A 36 AAIRPERG--ERMVEIGPGLGALTGPVIARLATPGSPLHAVELDR--DLIGRLEQRFGELLELHAGDALTFDFGS 106 (279)
T ss_dssp HHHCCCTT--CEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCH--HHHHHHHHHHGGGEEEEESCGGGCCGGG
T ss_pred HhcCCCCc--CEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCH--HHHHHHHHhcCCCcEEEECChhcCChhH
Confidence 34455555 38999999999999999987655 88887652 333322222 23556677788888765
No 279
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.13 E-value=0.0009 Score=73.99 Aligned_cols=99 Identities=11% Similarity=-0.046 Sum_probs=57.3
Q ss_pred CeEEEECCCCcHHHHHHhhC--------------------------------------------CCEEEEEecCCChh--
Q 046488 327 RIGLDFSIGTGTFAARMREF--------------------------------------------NVTLVSAIINLGAP-- 360 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~--------------------------------------------gV~Vv~vd~d~~~~-- 360 (480)
..|||.+||+|+++..++.. ...+++++.+..+-
T Consensus 192 ~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~~ 271 (703)
T 3v97_A 192 TPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQR 271 (703)
T ss_dssp SCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHHHH
T ss_pred CeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHHHH
Confidence 47999999999998766542 14678888763211
Q ss_pred HHHHHHHhCC---CCeeeecccCC--CCCCCccchheec--ccccCccChhcHHHHH---HHHHhcccCCcEEEEe
Q 046488 361 FNEMIALRGL---VPLYITINQRV--PFFDNTLDLIHTT--RFLDGWIDFVLLDFIL---YDWDRVLRPGGLLWID 426 (480)
Q Consensus 361 ~~~~iA~rgl---ip~~~~~ae~L--PFpd~SFDlV~ss--~vL~h~~d~~~l~~~L---~EI~RVLKPGG~fiI~ 426 (480)
+...+...|. +.+..+++..+ |+.+++||+|+++ +... +.+...+..++ .++.+.+.|||.+++.
T Consensus 272 A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~R-lg~~~~l~~ly~~l~~~lk~~~~g~~~~il 346 (703)
T 3v97_A 272 ARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGER-LDSEPALIALHSLLGRIMKNQFGGWNLSLF 346 (703)
T ss_dssp HHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC----CCHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCcccc-ccchhHHHHHHHHHHHHHHhhCCCCeEEEE
Confidence 1122223333 33445555555 5555689999997 3221 22222223344 4555556689999885
No 280
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.01 E-value=0.0028 Score=60.11 Aligned_cols=93 Identities=12% Similarity=-0.030 Sum_probs=57.7
Q ss_pred CCeEEEECCCCcHHHHHHhhC-CCEEEEEecCCCh--hHHHHHHHhCC-----CCeeeecccC---------------CC
Q 046488 326 IRIGLDFSIGTGTFAARMREF-NVTLVSAIINLGA--PFNEMIALRGL-----VPLYITINQR---------------VP 382 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~-gV~Vv~vd~d~~~--~~~~~iA~rgl-----ip~~~~~ae~---------------LP 382 (480)
.++||++||| ..+..|++. +-.+++++.+... .+...++..+. +.+.++.+.. ++
T Consensus 31 a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~ 108 (202)
T 3cvo_A 31 AEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYP 108 (202)
T ss_dssp CSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTT
T ss_pred CCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHH
Confidence 3589999985 566677765 5688888765321 12233444453 3344444221 23
Q ss_pred --------C-CCCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeec
Q 046488 383 --------F-FDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 383 --------F-pd~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
. ..++||+|+...-. . ...+..+.+.|||||+++++++
T Consensus 109 ~~~~~i~~~~~~~~fDlIfIDg~k-----~---~~~~~~~l~~l~~GG~Iv~DNv 155 (202)
T 3cvo_A 109 DYPLAVWRTEGFRHPDVVLVDGRF-----R---VGCALATAFSITRPVTLLFDDY 155 (202)
T ss_dssp HHHHGGGGCTTCCCCSEEEECSSS-----H---HHHHHHHHHHCSSCEEEEETTG
T ss_pred HHhhhhhccccCCCCCEEEEeCCC-----c---hhHHHHHHHhcCCCeEEEEeCC
Confidence 2 23789999975421 1 2467778899999999988873
No 281
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=96.99 E-value=0.00042 Score=71.82 Aligned_cols=93 Identities=13% Similarity=-0.005 Sum_probs=58.2
Q ss_pred CeEEEECCCCcHHHHHHhhC--C-CEEEEEecCCChh--HHHHHHHhCC----CCeeeecccC-CC-CCCCccchheecc
Q 046488 327 RIGLDFSIGTGTFAARMREF--N-VTLVSAIINLGAP--FNEMIALRGL----VPLYITINQR-VP-FFDNTLDLIHTTR 395 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~--g-V~Vv~vd~d~~~~--~~~~iA~rgl----ip~~~~~ae~-LP-Fpd~SFDlV~ss~ 395 (480)
.+|||++||+|.++..++.+ | ..+++++.+..+. +.+.+...+. +.++.+++.. +. -..+.||+|++.=
T Consensus 54 ~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lDP 133 (392)
T 3axs_A 54 VKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLDP 133 (392)
T ss_dssp EEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEECC
T ss_pred CEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEECC
Confidence 48999999999999999884 5 4577777652111 1123333343 2233344322 21 2256899999643
Q ss_pred cccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 396 FLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 396 vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
.... ..++..+.+.|+|||+++++
T Consensus 134 ----~g~~---~~~l~~a~~~Lk~gGll~~t 157 (392)
T 3axs_A 134 ----FGTP---VPFIESVALSMKRGGILSLT 157 (392)
T ss_dssp ----SSCC---HHHHHHHHHHEEEEEEEEEE
T ss_pred ----CcCH---HHHHHHHHHHhCCCCEEEEE
Confidence 1111 34888999999999998886
No 282
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=96.93 E-value=0.00051 Score=68.63 Aligned_cols=73 Identities=21% Similarity=0.254 Sum_probs=47.4
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhHHHHHHHh------CCCCeeeecccCCCC--CC-
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPFNEMIALR------GLVPLYITINQRVPF--FD- 385 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA~r------glip~~~~~ae~LPF--pd- 385 (480)
+.|.+.++. +|||+|||+|.++..++++ +..++++|.+. .+.. .|.+ ..+.++.++...++. .+
T Consensus 20 ~~L~~~~g~--~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~--~al~-~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~ 94 (301)
T 1m6y_A 20 EFLKPEDEK--IILDCTVGEGGHSRAILEHCPGCRIIGIDVDS--EVLR-IAEEKLKEFSDRVSLFKVSYREADFLLKTL 94 (301)
T ss_dssp HHHCCCTTC--EEEETTCTTSHHHHHHHHHCTTCEEEEEESCH--HHHH-HHHHHTGGGTTTEEEEECCGGGHHHHHHHT
T ss_pred HhcCCCCCC--EEEEEeCCcCHHHHHHHHHCCCCEEEEEECCH--HHHH-HHHHHHHhcCCcEEEEECCHHHHHHHHHhc
Confidence 344555553 8999999999999999986 57888888762 3332 2222 123455566666542 11
Q ss_pred --Cccchheec
Q 046488 386 --NTLDLIHTT 394 (480)
Q Consensus 386 --~SFDlV~ss 394 (480)
++||.|++.
T Consensus 95 g~~~~D~Vl~D 105 (301)
T 1m6y_A 95 GIEKVDGILMD 105 (301)
T ss_dssp TCSCEEEEEEE
T ss_pred CCCCCCEEEEc
Confidence 579998864
No 283
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=96.92 E-value=0.00051 Score=66.71 Aligned_cols=72 Identities=7% Similarity=0.020 Sum_probs=44.6
Q ss_pred HhcCCCCCCCCeEEEECCCCcHHHHHHhhCCCE--EEEEecCCChhHHHHHHHhCC-----CCeeeecccCCCCCCC---
Q 046488 317 EVLDIKPGEIRIGLDFSIGTGTFAARMREFNVT--LVSAIINLGAPFNEMIALRGL-----VPLYITINQRVPFFDN--- 386 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~--Vv~vd~d~~~~~~~~iA~rgl-----ip~~~~~ae~LPFpd~--- 386 (480)
+.+++.++. +|||||||+|.++. ++. +.. +++++++. .+ ...+.+.. +.++.+++..+++++.
T Consensus 15 ~~~~~~~~~--~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~--~~-~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~~ 87 (252)
T 1qyr_A 15 SAINPQKGQ--AMVEIGPGLAALTE-PVG-ERLDQLTVIELDR--DL-AARLQTHPFLGPKLTIYQQDAMTFNFGELAEK 87 (252)
T ss_dssp HHHCCCTTC--CEEEECCTTTTTHH-HHH-TTCSCEEEECCCH--HH-HHHHHTCTTTGGGEEEECSCGGGCCHHHHHHH
T ss_pred HhcCCCCcC--EEEEECCCCcHHHH-hhh-CCCCeEEEEECCH--HH-HHHHHHHhccCCceEEEECchhhCCHHHhhcc
Confidence 344555553 79999999999999 754 456 77877652 33 33444432 3445667777776542
Q ss_pred --ccchheecc
Q 046488 387 --TLDLIHTTR 395 (480)
Q Consensus 387 --SFDlV~ss~ 395 (480)
..|.|+++-
T Consensus 88 ~~~~~~vvsNl 98 (252)
T 1qyr_A 88 MGQPLRVFGNL 98 (252)
T ss_dssp HTSCEEEEEEC
T ss_pred cCCceEEEECC
Confidence 345666543
No 284
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.87 E-value=0.002 Score=64.07 Aligned_cols=117 Identities=15% Similarity=0.048 Sum_probs=73.2
Q ss_pred CeEEEECCCCcHHHHHHhhC-------CCEEEEEecCCC----------------------------hhHHHHHHHhCC-
Q 046488 327 RIGLDFSIGTGTFAARMREF-------NVTLVSAIINLG----------------------------APFNEMIALRGL- 370 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~-------gV~Vv~vd~d~~----------------------------~~~~~~iA~rgl- 370 (480)
.+||++|+.+|..+..|++. +-.+++++.... ..+...+++.|.
T Consensus 108 g~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl~ 187 (282)
T 2wk1_A 108 GDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDLL 187 (282)
T ss_dssp CEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTCC
T ss_pred CcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCCC
Confidence 37999999999987776531 345666653211 001223333333
Q ss_pred ---CCeeeec-ccCCC-CCCCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHc
Q 046488 371 ---VPLYITI-NQRVP-FFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKML 445 (480)
Q Consensus 371 ---ip~~~~~-ae~LP-Fpd~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~l 445 (480)
+.++.++ .+.|| +++++||+|+...-. .... ..+|..+.+.|+|||+++++++.......+.+.++.+..
T Consensus 188 ~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~---y~~~--~~~Le~~~p~L~pGGiIv~DD~~~~~G~~~Av~Ef~~~~ 262 (282)
T 2wk1_A 188 DEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL---YEST--WDTLTNLYPKVSVGGYVIVDDYMMCPPCKDAVDEYRAKF 262 (282)
T ss_dssp STTEEEEESCHHHHSTTCCCCCEEEEEECCCS---HHHH--HHHHHHHGGGEEEEEEEEESSCTTCHHHHHHHHHHHHHT
T ss_pred cCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc---cccH--HHHHHHHHhhcCCCEEEEEcCCCCCHHHHHHHHHHHHhc
Confidence 3455565 34455 346789999975432 1111 357899999999999999998743344556677888877
Q ss_pred Cce
Q 046488 446 KYK 448 (480)
Q Consensus 446 Gfk 448 (480)
|.+
T Consensus 263 ~i~ 265 (282)
T 2wk1_A 263 DIA 265 (282)
T ss_dssp TCC
T ss_pred CCc
Confidence 643
No 285
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.86 E-value=0.0031 Score=63.60 Aligned_cols=111 Identities=12% Similarity=-0.052 Sum_probs=61.2
Q ss_pred CCCCCCCCeEEEECCCCcHHHHHHhhC-CCE-EEEEecCCC-h--hHHHHHHHhCCCCeeee-cccCCCCCCCccchhee
Q 046488 320 DIKPGEIRIGLDFSIGTGTFAARMREF-NVT-LVSAIINLG-A--PFNEMIALRGLVPLYIT-INQRVPFFDNTLDLIHT 393 (480)
Q Consensus 320 ~l~~g~iR~VLDVGCGtG~fAa~Lae~-gV~-Vv~vd~d~~-~--~~~~~iA~rglip~~~~-~ae~LPFpd~SFDlV~s 393 (480)
.+.++. +|||+||++|+|+.+.+.. |+. |+++++... + |...+...-.++.+..+ +...++- ..+|+|+|
T Consensus 91 ~l~~~~--~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~--~~~D~ivc 166 (321)
T 3lkz_A 91 FLEPVG--KVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPS--ECCDTLLC 166 (321)
T ss_dssp SCCCCE--EEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCC--CCCSEEEE
T ss_pred CCCCCC--EEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCC--CCCCEEEE
Confidence 366664 8999999999999977765 665 667765321 1 11100000011222222 2344443 66999999
Q ss_pred cccccCccChh----cHHHHHHHHHhcccCC-cEEEEeeccCChhhH
Q 046488 394 TRFLDGWIDFV----LLDFILYDWDRVLRPG-GLLWIDSFFCAKEDM 435 (480)
Q Consensus 394 s~vL~h~~d~~----~l~~~L~EI~RVLKPG-G~fiI~~f~~~~edL 435 (480)
.-. .--..+. .--.+|.=+.+.|++| |-|++--+..-.++.
T Consensus 167 Dig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~~~v 212 (321)
T 3lkz_A 167 DIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYMPKV 212 (321)
T ss_dssp CCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTSHHH
T ss_pred ECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCChHH
Confidence 665 2222211 1112455556888999 888885444433444
No 286
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=96.85 E-value=0.002 Score=69.26 Aligned_cols=107 Identities=20% Similarity=0.155 Sum_probs=62.2
Q ss_pred hHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC-----------------CCEEEEEecCCChhHHHHHH-----HhCCC
Q 046488 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMREF-----------------NVTLVSAIINLGAPFNEMIA-----LRGLV 371 (480)
Q Consensus 314 ~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~-----------------gV~Vv~vd~d~~~~~~~~iA-----~rgli 371 (480)
++-+++...++ +|||.+||+|.|...+++. ...+.+++++. ....+| ..+.-
T Consensus 236 lmv~ll~p~~~---~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~---~~~~lA~~Nl~l~gi~ 309 (544)
T 3khk_A 236 LIVEMLEPYKG---RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNP---TTWKLAAMNMVIRGID 309 (544)
T ss_dssp HHHHHHCCCSE---EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCH---HHHHHHHHHHHHTTCC
T ss_pred HHHHHHhcCCC---eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCH---HHHHHHHHHHHHhCCC
Confidence 44455554333 7999999999987765431 35667777652 222222 33321
Q ss_pred -Ce--eeec-ccCCCCCCCccchheec--ccccCccC-----------------------hh-cHHHHHHHHHhcccCCc
Q 046488 372 -PL--YITI-NQRVPFFDNTLDLIHTT--RFLDGWID-----------------------FV-LLDFILYDWDRVLRPGG 421 (480)
Q Consensus 372 -p~--~~~~-ae~LPFpd~SFDlV~ss--~vL~h~~d-----------------------~~-~l~~~L~EI~RVLKPGG 421 (480)
.+ ..++ ...-.+.+..||+|+++ +....|.. .. .--.++..+.+.|||||
T Consensus 310 ~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gG 389 (544)
T 3khk_A 310 FNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTG 389 (544)
T ss_dssp CBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEE
T ss_pred cccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCc
Confidence 12 3343 22334567899999985 22212211 00 00147899999999999
Q ss_pred EEEEe
Q 046488 422 LLWID 426 (480)
Q Consensus 422 ~fiI~ 426 (480)
++.+.
T Consensus 390 r~aiV 394 (544)
T 3khk_A 390 SMALL 394 (544)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 97665
No 287
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=96.75 E-value=0.0042 Score=66.87 Aligned_cols=100 Identities=15% Similarity=0.079 Sum_probs=60.1
Q ss_pred CCeEEEECCCCcHHHHHHhhC-----CCEEEEEecCCChhH--HHHHHHhCCC----CeeeecccCC--C-CCCCccchh
Q 046488 326 IRIGLDFSIGTGTFAARMREF-----NVTLVSAIINLGAPF--NEMIALRGLV----PLYITINQRV--P-FFDNTLDLI 391 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~-----gV~Vv~vd~d~~~~~--~~~iA~rgli----p~~~~~ae~L--P-Fpd~SFDlV 391 (480)
..+|||.+||+|+|...++++ ...+.+++++...-. ...+...|.- .+..++.-.. | +.+..||+|
T Consensus 222 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~I 301 (542)
T 3lkd_A 222 GFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGV 301 (542)
T ss_dssp TCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSEE
T ss_pred CCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccEE
Confidence 458999999999988776654 567888887632111 1122233431 2334443222 4 457899999
Q ss_pred eecccc-cCcc------------------C--hhcHHHHHHHHHhccc-CCcEEEEe
Q 046488 392 HTTRFL-DGWI------------------D--FVLLDFILYDWDRVLR-PGGLLWID 426 (480)
Q Consensus 392 ~ss~vL-~h~~------------------d--~~~l~~~L~EI~RVLK-PGG~fiI~ 426 (480)
+++==+ ..|. . ... -.++..+.+.|| |||++.+.
T Consensus 302 vaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~-~~Fl~~~l~~Lk~~gGr~a~V 357 (542)
T 3lkd_A 302 LMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKAD-FAFLLHGYYHLKQDNGVMAIV 357 (542)
T ss_dssp EECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCH-HHHHHHHHHTBCTTTCEEEEE
T ss_pred EecCCcCCccccchhhhhhhhhhhhhhcCCCchhh-HHHHHHHHHHhCCCceeEEEE
Confidence 985111 1121 0 001 237899999999 99998664
No 288
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=96.62 E-value=0.022 Score=56.96 Aligned_cols=99 Identities=19% Similarity=0.127 Sum_probs=61.7
Q ss_pred CCCCeEEEECCCCcHHHHHHhhC-CC-EEEEEecCCChhHHHHHHHh------------CCCCeeeec-ccCCCCCCCcc
Q 046488 324 GEIRIGLDFSIGTGTFAARMREF-NV-TLVSAIINLGAPFNEMIALR------------GLVPLYITI-NQRVPFFDNTL 388 (480)
Q Consensus 324 g~iR~VLDVGCGtG~fAa~Lae~-gV-~Vv~vd~d~~~~~~~~iA~r------------glip~~~~~-ae~LPFpd~SF 388 (480)
.+.++||=||.|.|..+..+.++ ++ .++.+++| +....++++ ..+.++.++ .+-+--.+++|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID---~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~y 158 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEID---AGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTF 158 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESC---HHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCC---HHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccC
Confidence 34578999999999999999886 43 44455554 333333222 123344555 23344567899
Q ss_pred chheecccccCccChhc--HHHHHHHHHhcccCCcEEEEe
Q 046488 389 DLIHTTRFLDGWIDFVL--LDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 389 DlV~ss~vL~h~~d~~~--l~~~L~EI~RVLKPGG~fiI~ 426 (480)
|+|+.... ........ -..++..+.|+|+|||.++..
T Consensus 159 DvIi~D~~-dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 159 DVIISDCT-DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp EEEEESCC-CCCCTTCCSSCCHHHHHHHHTEEEEEEEEEE
T ss_pred CEEEEeCC-CcCCCchhhcCHHHHHHHHHHhCCCCEEEEe
Confidence 99996432 22111100 024899999999999998874
No 289
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=96.61 E-value=0.00081 Score=70.21 Aligned_cols=66 Identities=15% Similarity=-0.039 Sum_probs=45.1
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHH----HHHHh--CC--CCeeeecccC-CCC-CCCccchheec
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNE----MIALR--GL--VPLYITINQR-VPF-FDNTLDLIHTT 394 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~----~iA~r--gl--ip~~~~~ae~-LPF-pd~SFDlV~ss 394 (480)
.+|||+|||+|..+..|++.+..|++++.+. .+.. .+... |. +.++.+++.. ++. ++++||+|++.
T Consensus 95 ~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~--~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 95 TKVVDLTGGLGIDFIALMSKASQGIYIERND--ETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp CEEEESSCSSSHHHHHHHTTCSEEEEEESCH--HHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CEEEEeCCCchHHHHHHHhcCCEEEEEECCH--HHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 4899999999999999999888999988763 2222 22222 33 3445555444 343 35689999984
No 290
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=96.56 E-value=0.0034 Score=57.43 Aligned_cols=81 Identities=17% Similarity=0.108 Sum_probs=52.6
Q ss_pred eEEEECCCCc-HHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCCC--CccchheecccccCccCh
Q 046488 328 IGLDFSIGTG-TFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFD--NTLDLIHTTRFLDGWIDF 403 (480)
Q Consensus 328 ~VLDVGCGtG-~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFpd--~SFDlV~ss~vL~h~~d~ 403 (480)
+|||||||.| ..|..|++ .|+.|+++|++..+. .++.++.-. |..+ ..||+|++.+ ++
T Consensus 38 rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av-----------~~v~dDiF~-P~~~~Y~~~DLIYsir------PP 99 (153)
T 2k4m_A 38 RVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHG-----------GIVRDDITS-PRMEIYRGAALIYSIR------PP 99 (153)
T ss_dssp EEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSST-----------TEECCCSSS-CCHHHHTTEEEEEEES------CC
T ss_pred cEEEEccCCChHHHHHHHHhCCCeEEEEECCcccc-----------ceEEccCCC-CcccccCCcCEEEEcC------CC
Confidence 8999999999 69999997 899999998764221 144444322 3333 4799998644 23
Q ss_pred hcHHHHHHHHHhcccCCcEEEEeec
Q 046488 404 VLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 404 ~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
.+|...+.++.+-. |.-++|..+
T Consensus 100 ~El~~~i~~lA~~v--~adliI~pL 122 (153)
T 2k4m_A 100 AEIHSSLMRVADAV--GARLIIKPL 122 (153)
T ss_dssp TTTHHHHHHHHHHH--TCEEEEECB
T ss_pred HHHHHHHHHHHHHc--CCCEEEEcC
Confidence 33355666666543 455666543
No 291
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.17 E-value=0.061 Score=52.87 Aligned_cols=116 Identities=16% Similarity=0.047 Sum_probs=62.6
Q ss_pred CCCCCCCCeEEEECCCCcHHHHHHhhC-CCE-EEEEecCC-Ch--hHHHHHHHhC--CCCeeee-cccCCCCCCCccchh
Q 046488 320 DIKPGEIRIGLDFSIGTGTFAARMREF-NVT-LVSAIINL-GA--PFNEMIALRG--LVPLYIT-INQRVPFFDNTLDLI 391 (480)
Q Consensus 320 ~l~~g~iR~VLDVGCGtG~fAa~Lae~-gV~-Vv~vd~d~-~~--~~~~~iA~rg--lip~~~~-~ae~LPFpd~SFDlV 391 (480)
.++++. +|||+||++|+|+.+.+.+ |+. |+++++.. .+ |...+ .-| ++.+..+ +...++ ...+|.|
T Consensus 75 ~l~~g~--~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~--s~gwn~v~fk~gvDv~~~~--~~~~Dtl 148 (267)
T 3p8z_A 75 MVIPEG--RVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMS--TYGWNIVKLMSGKDVFYLP--PEKCDTL 148 (267)
T ss_dssp SSCCCE--EEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCC--CTTTTSEEEECSCCGGGCC--CCCCSEE
T ss_pred CCCCCC--EEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhh--hcCcCceEEEeccceeecC--CccccEE
Confidence 466664 8999999999999977765 654 66666532 11 11100 011 1222223 233343 3669999
Q ss_pred eecccccCcc---ChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHH
Q 046488 392 HTTRFLDGWI---DFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVF 442 (480)
Q Consensus 392 ~ss~vL~h~~---d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l 442 (480)
+|...=..-. +...--.+|.=+.+.|++ |-|++--+.....+..+..+.+
T Consensus 149 lcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~p~v~e~l~~l 201 (267)
T 3p8z_A 149 LCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYMPTVIEHLERL 201 (267)
T ss_dssp EECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCSHHHHHHHHHH
T ss_pred EEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCChhHHHHHHHH
Confidence 9965432111 111111255555788898 7888755554444443333333
No 292
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.14 E-value=0.024 Score=58.06 Aligned_cols=113 Identities=19% Similarity=0.116 Sum_probs=66.1
Q ss_pred hhhhHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhCCC--EEEEEecCCChhHHHH---HHHh-CC------CCee--ee
Q 046488 311 ADFLIPEVLDIKPGEIRIGLDFSIGTGTFAARMREFNV--TLVSAIINLGAPFNEM---IALR-GL------VPLY--IT 376 (480)
Q Consensus 311 ad~~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV--~Vv~vd~d~~~~~~~~---iA~r-gl------ip~~--~~ 376 (480)
+..+...+|+.++|+ +|||+.+|.|+=+.+|++.+- .+++.+.+ ...... ...+ +. ..+. ..
T Consensus 136 aS~l~~~~L~~~pg~--~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~--~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~ 211 (359)
T 4fzv_A 136 ASLLPVLALGLQPGD--IVLDLCAAPGGKTLALLQTGCCRNLAANDLS--PSRIARLQKILHSYVPEEIRDGNQVRVTSW 211 (359)
T ss_dssp GGHHHHHHHCCCTTE--EEEESSCTTCHHHHHHHHTTCEEEEEEECSC--HHHHHHHHHHHHHHSCTTTTTSSSEEEECC
T ss_pred HHHHHHHHhCCCCCC--EEEEecCCccHHHHHHHHhcCCCcEEEEcCC--HHHHHHHHHHHHHhhhhhhccCCceEEEeC
Confidence 344555678888876 899999999999988888744 35555543 222211 1111 11 1222 22
Q ss_pred cccCCC-CCCCccchhee----cc---cccC--------ccCh------hcHHHHHHHHHhcccCCcEEEEee
Q 046488 377 INQRVP-FFDNTLDLIHT----TR---FLDG--------WIDF------VLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 377 ~ae~LP-Fpd~SFDlV~s----s~---vL~h--------~~d~------~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
++..++ +..+.||.|++ +. .+.. |... ..-..+|....+.|||||+++.+.
T Consensus 212 D~~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsT 284 (359)
T 4fzv_A 212 DGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYST 284 (359)
T ss_dssp CGGGHHHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred chhhcchhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Confidence 333332 45689999984 33 1111 1100 001357888899999999988763
No 293
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=96.07 E-value=0.021 Score=64.55 Aligned_cols=100 Identities=10% Similarity=-0.113 Sum_probs=57.4
Q ss_pred CeEEEECCCCcHHHHHHhhCC-----CEEEEEecCCChhHHH--HHHHh-----CCCC--eee-ecccC-CCCCCCccch
Q 046488 327 RIGLDFSIGTGTFAARMREFN-----VTLVSAIINLGAPFNE--MIALR-----GLVP--LYI-TINQR-VPFFDNTLDL 390 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~g-----V~Vv~vd~d~~~~~~~--~iA~r-----glip--~~~-~~ae~-LPFpd~SFDl 390 (480)
.+|||.|||+|.|+..++++. ..+.+++++...-... +.... ..+. .+. ++... -+.....||+
T Consensus 323 ~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kFDV 402 (878)
T 3s1s_A 323 EVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANVSV 402 (878)
T ss_dssp CEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTEEE
T ss_pred CEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCCCE
Confidence 489999999999999888752 4577887763221111 11111 1111 111 22222 2345678999
Q ss_pred heecccccC-ccCh-------------------------hcHHHHHHHHHhcccCCcEEEEe
Q 046488 391 IHTTRFLDG-WIDF-------------------------VLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 391 V~ss~vL~h-~~d~-------------------------~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
|+++==+.. +... .....++..+.+.|||||++.+.
T Consensus 403 VIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfI 464 (878)
T 3s1s_A 403 VVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAI 464 (878)
T ss_dssp EEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEE
T ss_pred EEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEE
Confidence 998522211 1100 01134678899999999998775
No 294
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=95.97 E-value=0.028 Score=56.82 Aligned_cols=133 Identities=15% Similarity=0.070 Sum_probs=75.4
Q ss_pred CeEEEECC------CCcHHHHH-HhhCCCEEEEEecCCChhHHHHHHHhCCCC-eeeecccCCCCCCCccchheeccccc
Q 046488 327 RIGLDFSI------GTGTFAAR-MREFNVTLVSAIINLGAPFNEMIALRGLVP-LYITINQRVPFFDNTLDLIHTTRFLD 398 (480)
Q Consensus 327 R~VLDVGC------GtG~fAa~-Lae~gV~Vv~vd~d~~~~~~~~iA~rglip-~~~~~ae~LPFpd~SFDlV~ss~vL~ 398 (480)
.+|||+|+ -.|++..+ +...|..++++|+..-.. ..+ .+.+++..+.. .+.||+|+|..+=.
T Consensus 111 mrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~s---------da~~~IqGD~~~~~~-~~k~DLVISDMAPN 180 (344)
T 3r24_A 111 MRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVS---------DADSTLIGDCATVHT-ANKWDLIISDMYDP 180 (344)
T ss_dssp CEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBC---------SSSEEEESCGGGEEE-SSCEEEEEECCCCT
T ss_pred CEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCccccc---------CCCeEEEcccccccc-CCCCCEEEecCCCC
Confidence 48999996 56775332 323345788988763211 112 24566544332 47899999854311
Q ss_pred --CccC--h----hcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEEEEeeccCCCCcceeEEEE
Q 046488 399 --GWID--F----VLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKWVVVPKRDKDDREVFFSAV 470 (480)
Q Consensus 399 --h~~d--~----~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W~~~~k~d~~~~E~~lsav 470 (480)
...+ . ...+.++.=+.++|+|||.|++--|....+ +.+.++.+ .|+.++-.. ........|+|+.++
T Consensus 181 tTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~--~~L~~lrk--~F~~VK~fK-~ASRa~SsEvYLVG~ 255 (344)
T 3r24_A 181 RTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWN--ADLYKLMG--HFSWWTAFV-TNVNASSSEAFLIGA 255 (344)
T ss_dssp TSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCC--HHHHHHHT--TEEEEEEEE-EGGGTTSSCEEEEEE
T ss_pred cCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCH--HHHHHHHh--hCCeEEEEC-CCCCCCCeeEEEEee
Confidence 1111 1 112344444567999999999877765553 23444443 477654332 111125679999887
Q ss_pred EEeC
Q 046488 471 LEKP 474 (480)
Q Consensus 471 ~qKP 474 (480)
--|-
T Consensus 256 gfKg 259 (344)
T 3r24_A 256 NYLG 259 (344)
T ss_dssp EECS
T ss_pred eccC
Confidence 6554
No 295
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=94.81 E-value=0.16 Score=52.54 Aligned_cols=120 Identities=15% Similarity=0.061 Sum_probs=68.5
Q ss_pred CCCeEEEECCCCcHHHHHHhhCCC-EEEEEecCCChhHHHHHHHhCC---------------CCeeeecc----cCCCCC
Q 046488 325 EIRIGLDFSIGTGTFAARMREFNV-TLVSAIINLGAPFNEMIALRGL---------------VPLYITIN----QRVPFF 384 (480)
Q Consensus 325 ~iR~VLDVGCGtG~fAa~Lae~gV-~Vv~vd~d~~~~~~~~iA~rgl---------------ip~~~~~a----e~LPFp 384 (480)
+.++||=||.|.|..+..+.++.. .+..+++| +....++++-. +.++++++ ++.+-.
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEID---p~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~ 281 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEID---QMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 281 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESC---HHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccC---HHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhc
Confidence 357999999999999999988643 34445554 44444444321 11223331 122223
Q ss_pred CCccchheecccccCc--cCh----h--cHHHHHHHHHhcccCCcEEEEee--ccCChhhHHHHHHHHHHcCceee
Q 046488 385 DNTLDLIHTTRFLDGW--IDF----V--LLDFILYDWDRVLRPGGLLWIDS--FFCAKEDMNDYLEVFKMLKYKKH 450 (480)
Q Consensus 385 d~SFDlV~ss~vL~h~--~d~----~--~l~~~L~EI~RVLKPGG~fiI~~--f~~~~edL~~~~~~l~~lGfkkl 450 (480)
.+.||+|+.... ... .++ . --..++..+.|+|+|||.++... .+ ..+.+..+.+.++++ |..+
T Consensus 282 ~~~yDvIIvDl~-D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~-~~~~~~~i~~tl~~v-F~~v 354 (381)
T 3c6k_A 282 GREFDYVINDLT-AVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVN-LTEALSLYEEQLGRL-YCPV 354 (381)
T ss_dssp TCCEEEEEEECC-SSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETT-CHHHHHHHHHHHTTS-SSCE
T ss_pred cCceeEEEECCC-CCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCc-chhHHHHHHHHHHHh-CCcc
Confidence 568999996421 111 011 0 01346788999999999987642 11 134445566666665 4433
No 296
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.51 E-value=0.026 Score=55.33 Aligned_cols=30 Identities=20% Similarity=0.159 Sum_probs=27.6
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecC
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIIN 356 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d 356 (480)
.+|||.+||+|+++..+++.|..+++++++
T Consensus 237 ~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~ 266 (297)
T 2zig_A 237 DVVLDPFAGTGTTLIAAARWGRRALGVELV 266 (297)
T ss_dssp CEEEETTCTTTHHHHHHHHTTCEEEEEESC
T ss_pred CEEEECCCCCCHHHHHHHHcCCeEEEEeCC
Confidence 389999999999999999999999999876
No 297
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=92.88 E-value=0.024 Score=70.78 Aligned_cols=43 Identities=21% Similarity=0.193 Sum_probs=15.4
Q ss_pred CCCCCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 382 PFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 382 PFpd~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
+|...+||+|+++.+++-..+. ...|..+++.|||||++++..
T Consensus 1306 ~~~~~~ydlvia~~vl~~t~~~---~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1306 PGSLGKADLLVCNCALATLGDP---AVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp C-----CCEEEEECC-----------------------CCEEEEEE
T ss_pred cCCCCceeEEEEcccccccccH---HHHHHHHHHhcCCCcEEEEEe
Confidence 4567889999999988644333 468999999999999988753
No 298
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=92.74 E-value=0.17 Score=50.45 Aligned_cols=37 Identities=19% Similarity=0.327 Sum_probs=30.9
Q ss_pred hcCCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecC
Q 046488 318 VLDIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIIN 356 (480)
Q Consensus 318 vL~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d 356 (480)
.|.++++. .+||.+||.|..+..+++++..++++|.|
T Consensus 17 ~L~~~~gg--~~VD~T~G~GGHS~~il~~~g~VigiD~D 53 (285)
T 1wg8_A 17 LLAVRPGG--VYVDATLGGAGHARGILERGGRVIGLDQD 53 (285)
T ss_dssp HHTCCTTC--EEEETTCTTSHHHHHHHHTTCEEEEEESC
T ss_pred hhCCCCCC--EEEEeCCCCcHHHHHHHHCCCEEEEEeCC
Confidence 44566654 89999999999999999987789998876
No 299
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=91.66 E-value=0.5 Score=47.73 Aligned_cols=102 Identities=17% Similarity=0.082 Sum_probs=59.5
Q ss_pred hcCCCCCCCCeEEEECCCC-cHHHHHHhhC-CC-EEEEEecCCChhHHHHHHHhCCCCeeeecc-cCC------C-CCCC
Q 046488 318 VLDIKPGEIRIGLDFSIGT-GTFAARMREF-NV-TLVSAIINLGAPFNEMIALRGLVPLYITIN-QRV------P-FFDN 386 (480)
Q Consensus 318 vL~l~~g~iR~VLDVGCGt-G~fAa~Lae~-gV-~Vv~vd~d~~~~~~~~iA~rglip~~~~~a-e~L------P-Fpd~ 386 (480)
..++++|+ +||-+|+|. |.++..+++. |. .++.++.+ +.....+++-+.. .+... +.+ . ....
T Consensus 180 ~~~~~~g~--~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~---~~~~~~a~~lGa~-~i~~~~~~~~~~~~~~~~~g~ 253 (398)
T 2dph_A 180 SAGVKPGS--HVYIAGAGPVGRCAAAGARLLGAACVIVGDQN---PERLKLLSDAGFE-TIDLRNSAPLRDQIDQILGKP 253 (398)
T ss_dssp HTTCCTTC--EEEEECCSHHHHHHHHHHHHHTCSEEEEEESC---HHHHHHHHTTTCE-EEETTSSSCHHHHHHHHHSSS
T ss_pred HcCCCCCC--EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC---HHHHHHHHHcCCc-EEcCCCcchHHHHHHHHhCCC
Confidence 44566665 899999986 8888888774 87 78887754 2333344443332 22211 111 0 1123
Q ss_pred ccchheecccccC--------ccChhcHHHHHHHHHhcccCCcEEEEeec
Q 046488 387 TLDLIHTTRFLDG--------WIDFVLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 387 SFDlV~ss~vL~h--------~~d~~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
.||+|+-.-.-.. ..++ ...+.+..+.|||||++++...
T Consensus 254 g~Dvvid~~g~~~~~~~~~~~~~~~---~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 254 EVDCGVDAVGFEAHGLGDEANTETP---NGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp CEEEEEECSCTTCBCSGGGTTSBCT---THHHHHHHHHEEEEEEEECCSC
T ss_pred CCCEEEECCCCcccccccccccccc---HHHHHHHHHHHhcCCEEEEecc
Confidence 6898884332110 0011 1368999999999999876543
No 300
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=91.62 E-value=0.46 Score=47.37 Aligned_cols=96 Identities=14% Similarity=0.051 Sum_probs=56.8
Q ss_pred cCCCCCCCCeEEEECCCC-cHHHHHHhhC-CC-EEEEEecCCChhHHHHHHHhCCCCeeeecc-----cCC-CCCCCccc
Q 046488 319 LDIKPGEIRIGLDFSIGT-GTFAARMREF-NV-TLVSAIINLGAPFNEMIALRGLVPLYITIN-----QRV-PFFDNTLD 389 (480)
Q Consensus 319 L~l~~g~iR~VLDVGCGt-G~fAa~Lae~-gV-~Vv~vd~d~~~~~~~~iA~rglip~~~~~a-----e~L-PFpd~SFD 389 (480)
.++++++ +||-+|+|. |.++..+++. |. .++.++.+ +.....+++-+....+... +.+ ...++.||
T Consensus 186 ~~~~~g~--~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~---~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D 260 (371)
T 1f8f_A 186 LKVTPAS--SFVTWGAGAVGLSALLAAKVCGASIIIAVDIV---ESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVN 260 (371)
T ss_dssp TCCCTTC--EEEEESCSHHHHHHHHHHHHHTCSEEEEEESC---HHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEE
T ss_pred cCCCCCC--EEEEECCCHHHHHHHHHHHHcCCCeEEEECCC---HHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCc
Confidence 3456664 899999886 7788888764 77 57777644 2233333332233222211 111 01123688
Q ss_pred hheecccccCccChhcHHHHHHHHHhcccCCcEEEEeec
Q 046488 390 LIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 390 lV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
+|+-.-. . ...+.+..+.|||||++++...
T Consensus 261 ~vid~~g-----~----~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 261 FALESTG-----S----PEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp EEEECSC-----C----HHHHHHHHHTEEEEEEEEECCC
T ss_pred EEEECCC-----C----HHHHHHHHHHHhcCCEEEEeCC
Confidence 8874322 1 2378899999999999987643
No 301
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=91.15 E-value=0.5 Score=46.88 Aligned_cols=96 Identities=14% Similarity=0.048 Sum_probs=57.3
Q ss_pred hcCCCCCCCCeEEEECCCC-cHHHHHHhh-CCC-EEEEEecCCChhHHHHHHHhCCCCeeeecc--------cCC-CCCC
Q 046488 318 VLDIKPGEIRIGLDFSIGT-GTFAARMRE-FNV-TLVSAIINLGAPFNEMIALRGLVPLYITIN--------QRV-PFFD 385 (480)
Q Consensus 318 vL~l~~g~iR~VLDVGCGt-G~fAa~Lae-~gV-~Vv~vd~d~~~~~~~~iA~rglip~~~~~a--------e~L-PFpd 385 (480)
..++++|+ +||-+|+|. |.++..+++ .|. .++.++.+ +.....+++-+....+... +.+ ....
T Consensus 166 ~~~~~~g~--~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~---~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~ 240 (356)
T 1pl8_A 166 RGGVTLGH--KVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLS---ATRLSKAKEIGADLVLQISKESPQEIARKVEGQLG 240 (356)
T ss_dssp HHTCCTTC--EEEEECCSHHHHHHHHHHHHTTCSEEEEEESC---HHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHT
T ss_pred hcCCCCCC--EEEEECCCHHHHHHHHHHHHcCCCEEEEECCC---HHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhC
Confidence 34566665 799999875 777777776 487 78777654 2333344443333222211 010 0001
Q ss_pred CccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 386 NTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 386 ~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
+.||+|+-.-. . ...+.+..++|||||++++..
T Consensus 241 ~g~D~vid~~g-----~----~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 241 CKPEVTIECTG-----A----EASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp SCCSEEEECSC-----C----HHHHHHHHHHSCTTCEEEECS
T ss_pred CCCCEEEECCC-----C----hHHHHHHHHHhcCCCEEEEEe
Confidence 45888874321 1 236888999999999998764
No 302
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=90.93 E-value=1.5 Score=44.14 Aligned_cols=65 Identities=11% Similarity=0.008 Sum_probs=41.0
Q ss_pred cCCCC-CCCccchheecccccCccChhcH-HHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceee
Q 046488 379 QRVPF-FDNTLDLIHTTRFLDGWIDFVLL-DFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKH 450 (480)
Q Consensus 379 e~LPF-pd~SFDlV~ss~vL~h~~d~~~l-~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl 450 (480)
+.++- .+..||+|+-. .|..-.+++.+ +.+|..|+|.++|||.|.- |. ... .+...+..+||.--
T Consensus 177 ~~l~~l~~~~~Da~flD-gFsP~kNPeLWs~e~f~~l~~~~~pgg~laT--Yt-aag---~VRR~L~~aGF~V~ 243 (308)
T 3vyw_A 177 KRIKEVENFKADAVFHD-AFSPYKNPELWTLDFLSLIKERIDEKGYWVS--YS-SSL---SVRKSLLTLGFKVG 243 (308)
T ss_dssp HHGGGCCSCCEEEEEEC-CSCTTTSGGGGSHHHHHHHHTTEEEEEEEEE--SC-CCH---HHHHHHHHTTCEEE
T ss_pred HHHhhhcccceeEEEeC-CCCcccCcccCCHHHHHHHHHHhCCCcEEEE--Ee-CcH---HHHHHHHHCCCEEE
Confidence 33442 35589999863 34433333211 3599999999999998653 33 332 34457888999844
No 303
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=90.57 E-value=1.5 Score=46.83 Aligned_cols=107 Identities=23% Similarity=0.228 Sum_probs=58.3
Q ss_pred hHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC---------------CCEEEEEecCCChhHHHHH-----HHhCCC--
Q 046488 314 LIPEVLDIKPGEIRIGLDFSIGTGTFAARMREF---------------NVTLVSAIINLGAPFNEMI-----ALRGLV-- 371 (480)
Q Consensus 314 ~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~---------------gV~Vv~vd~d~~~~~~~~i-----A~rgli-- 371 (480)
++-+++...++. +|+|-.||||+|.....++ ...+.|.+.+. ....+ ...|.-
T Consensus 208 lmv~l~~p~~~~--~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~---~~~~la~mNl~lhg~~~~ 282 (530)
T 3ufb_A 208 FMVEVMDPQLGE--SVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKS---LPYLLVQMNLLLHGLEYP 282 (530)
T ss_dssp HHHHHHCCCTTC--CEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSH---HHHHHHHHHHHHHTCSCC
T ss_pred HHHHhhccCCCC--EEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccH---HHHHHHHHHHHhcCCccc
Confidence 455666655553 7999999999997655431 23466776652 22222 234432
Q ss_pred CeeeecccCCCC----CCCccchheeccccc--Cc-------c-----ChhcHHHHHHHHHhccc-------CCcEEEEe
Q 046488 372 PLYITINQRVPF----FDNTLDLIHTTRFLD--GW-------I-----DFVLLDFILYDWDRVLR-------PGGLLWID 426 (480)
Q Consensus 372 p~~~~~ae~LPF----pd~SFDlV~ss~vL~--h~-------~-----d~~~l~~~L~EI~RVLK-------PGG~fiI~ 426 (480)
.+..++.-..|+ ....||+|+++==+. .+ . .... -.++.-+.+.|| |||++.+.
T Consensus 283 ~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~-~~Fl~~~l~~Lk~~~~~l~~gGr~avV 361 (530)
T 3ufb_A 283 RIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETA-MLFLQLIMRKLKRPGHGSDNGGRAAVV 361 (530)
T ss_dssp EEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHH-HHHHHHHHHHBCCTTSSSSSCCEEEEE
T ss_pred cccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhH-HHHHHHHHHHhhhhhhccCCCceEEEE
Confidence 223333323332 245799999862221 10 0 0111 235666777776 79998765
No 304
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=89.83 E-value=0.83 Score=45.76 Aligned_cols=98 Identities=13% Similarity=0.106 Sum_probs=58.6
Q ss_pred HhcCCCCCCCCeEEEECCCC-cHHHHHHhh-CCC-EEEEEecCCChhHHHHHHHhCCCCeeeec-----cc---C-CCCC
Q 046488 317 EVLDIKPGEIRIGLDFSIGT-GTFAARMRE-FNV-TLVSAIINLGAPFNEMIALRGLVPLYITI-----NQ---R-VPFF 384 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGt-G~fAa~Lae-~gV-~Vv~vd~d~~~~~~~~iA~rglip~~~~~-----ae---~-LPFp 384 (480)
+...+++|+ +||=+|+|. |.++..+++ .|+ .++.++.+ +.....+++-+....+.. .+ . ....
T Consensus 176 ~~~~~~~g~--~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~---~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~ 250 (370)
T 4ej6_A 176 DLSGIKAGS--TVAILGGGVIGLLTVQLARLAGATTVILSTRQ---ATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLV 250 (370)
T ss_dssp HHHTCCTTC--EEEEECCSHHHHHHHHHHHHTTCSEEEEECSC---HHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSS
T ss_pred HhcCCCCCC--EEEEECCCHHHHHHHHHHHHcCCCEEEEECCC---HHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhcc
Confidence 344567775 788899865 677777776 487 77776543 233334444333332221 11 1 1122
Q ss_pred CCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeec
Q 046488 385 DNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 385 d~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
++.||+|+-.-. . ...+.+..+.|+|||++++...
T Consensus 251 ~gg~Dvvid~~G-----~----~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 251 PGGVDVVIECAG-----V----AETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp TTCEEEEEECSC-----C----HHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCCEEEECCC-----C----HHHHHHHHHHhccCCEEEEEec
Confidence 347898884321 1 2478999999999999988643
No 305
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=89.78 E-value=0.27 Score=47.10 Aligned_cols=30 Identities=23% Similarity=0.379 Sum_probs=27.5
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecC
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIIN 356 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d 356 (480)
..|||..||+|+.+.+..+.|..+++++++
T Consensus 214 ~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~ 243 (260)
T 1g60_A 214 DLVLDCFMGSGTTAIVAKKLGRNFIGCDMN 243 (260)
T ss_dssp CEEEESSCTTCHHHHHHHHTTCEEEEEESC
T ss_pred CEEEECCCCCCHHHHHHHHcCCeEEEEeCC
Confidence 389999999999999999999999999876
No 306
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=89.52 E-value=1.6 Score=43.07 Aligned_cols=96 Identities=11% Similarity=0.104 Sum_probs=56.2
Q ss_pred hcCCCCCCCCeEEEECCCC-cHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeecc--cCCC------CC---
Q 046488 318 VLDIKPGEIRIGLDFSIGT-GTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITIN--QRVP------FF--- 384 (480)
Q Consensus 318 vL~l~~g~iR~VLDVGCGt-G~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~a--e~LP------Fp--- 384 (480)
..++++|+ +||-+|+|. |.++..+++ .|..++.++.+ +.....+++-+....+... +.+. ..
T Consensus 163 ~~~~~~g~--~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~---~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~ 237 (352)
T 1e3j_A 163 RAGVQLGT--TVLVIGAGPIGLVSVLAAKAYGAFVVCTARS---PRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAI 237 (352)
T ss_dssp HHTCCTTC--EEEEECCSHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHS
T ss_pred hcCCCCCC--EEEEECCCHHHHHHHHHHHHcCCEEEEEcCC---HHHHHHHHHhCCCEEEcCcccccHHHHHHHHhcccc
Confidence 34566665 799999874 677777776 48887776643 2333334443333322211 1110 11
Q ss_pred CCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 385 DNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 385 d~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
.+.+|+|+-... . ...+.+..+.|+|||++++..
T Consensus 238 g~g~D~vid~~g-----~----~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 238 GDLPNVTIDCSG-----N----EKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp SSCCSEEEECSC-----C----HHHHHHHHHHSCTTCEEEECS
T ss_pred CCCCCEEEECCC-----C----HHHHHHHHHHHhcCCEEEEEe
Confidence 245787774321 1 236888999999999988764
No 307
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=89.41 E-value=0.61 Score=45.77 Aligned_cols=94 Identities=15% Similarity=0.131 Sum_probs=56.5
Q ss_pred CCCCCCCCeEEEECCCC-cHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeeccc-C----CCCCCCccchhe
Q 046488 320 DIKPGEIRIGLDFSIGT-GTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITINQ-R----VPFFDNTLDLIH 392 (480)
Q Consensus 320 ~l~~g~iR~VLDVGCGt-G~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae-~----LPFpd~SFDlV~ 392 (480)
.+++|+ +||-+|+|. |.++..+++ .|..++.++.+ +.....+++-+....+...+ . +--..+.+|+|+
T Consensus 163 ~~~~g~--~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~---~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vi 237 (340)
T 3s2e_A 163 DTRPGQ--WVVISGIGGLGHVAVQYARAMGLRVAAVDID---DAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVL 237 (340)
T ss_dssp TCCTTS--EEEEECCSTTHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEE
T ss_pred CCCCCC--EEEEECCCHHHHHHHHHHHHCCCeEEEEeCC---HHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEE
Confidence 455664 788899875 888888876 48888887754 23333444433333332111 0 000112577766
Q ss_pred ecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 393 TTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 393 ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
-... . ...+.+..+.|+|||++++..
T Consensus 238 d~~g-----~----~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 238 VTAV-----S----PKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp ESSC-----C----HHHHHHHHHHEEEEEEEEECS
T ss_pred EeCC-----C----HHHHHHHHHHhccCCEEEEeC
Confidence 3211 1 347899999999999988763
No 308
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=89.12 E-value=1.3 Score=39.63 Aligned_cols=94 Identities=15% Similarity=0.063 Sum_probs=52.9
Q ss_pred cCCCCCCCCeEEEECC--CCcHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeecc-----cCC-C-CCCCcc
Q 046488 319 LDIKPGEIRIGLDFSI--GTGTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITIN-----QRV-P-FFDNTL 388 (480)
Q Consensus 319 L~l~~g~iR~VLDVGC--GtG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~a-----e~L-P-Fpd~SF 388 (480)
.+++++ ++||.+|+ |.|..++.++. .|..++.++.+ .... ..+++-+.....+.. +.+ . ...+.+
T Consensus 34 ~~~~~g--~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~--~~~~-~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~ 108 (198)
T 1pqw_A 34 GRLSPG--ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGS--DAKR-EMLSRLGVEYVGDSRSVDFADEILELTDGYGV 108 (198)
T ss_dssp SCCCTT--CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESS--HHHH-HHHHTTCCSEEEETTCSTHHHHHHHHTTTCCE
T ss_pred hCCCCC--CEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCC--HHHH-HHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCC
Confidence 345555 48999995 55666555554 58888877654 1222 223332222222211 000 0 112458
Q ss_pred chheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 389 DLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 389 DlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
|+|+.+.. . ..+.+..+.|||||++++..
T Consensus 109 D~vi~~~g------~----~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 109 DVVLNSLA------G----EAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp EEEEECCC------T----HHHHHHHHTEEEEEEEEECS
T ss_pred eEEEECCc------h----HHHHHHHHHhccCCEEEEEc
Confidence 88875321 1 26889999999999988764
No 309
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=89.05 E-value=1.2 Score=44.80 Aligned_cols=101 Identities=15% Similarity=0.106 Sum_probs=58.7
Q ss_pred cCCCCCCCCeEEEECCCC-cHHHHHHhh-CCC-EEEEEecCCChhHHHHHHHhCCCCeeeecccC------CC--CCCCc
Q 046488 319 LDIKPGEIRIGLDFSIGT-GTFAARMRE-FNV-TLVSAIINLGAPFNEMIALRGLVPLYITINQR------VP--FFDNT 387 (480)
Q Consensus 319 L~l~~g~iR~VLDVGCGt-G~fAa~Lae-~gV-~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~------LP--Fpd~S 387 (480)
.++++|+ +||-+|+|. |.++..+++ .|. .++.++.+ +...+.+++-+.. .+...+. +. ...+.
T Consensus 181 ~~~~~g~--~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~---~~~~~~a~~lGa~-~i~~~~~~~~~~~v~~~t~g~g 254 (398)
T 1kol_A 181 AGVGPGS--TVYVAGAGPVGLAAAASARLLGAAVVIVGDLN---PARLAHAKAQGFE-IADLSLDTPLHEQIAALLGEPE 254 (398)
T ss_dssp TTCCTTC--EEEEECCSHHHHHHHHHHHHTTCSEEEEEESC---HHHHHHHHHTTCE-EEETTSSSCHHHHHHHHHSSSC
T ss_pred cCCCCCC--EEEEECCcHHHHHHHHHHHHCCCCeEEEEcCC---HHHHHHHHHcCCc-EEccCCcchHHHHHHHHhCCCC
Confidence 4566665 799999875 778888876 477 57777644 2333344443333 2221111 10 12246
Q ss_pred cchheeccccc---------CccChhcHHHHHHHHHhcccCCcEEEEeec
Q 046488 388 LDLIHTTRFLD---------GWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 388 FDlV~ss~vL~---------h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
+|+|+-.-.-. |+.++ ...+.+..++|||||++++...
T Consensus 255 ~Dvvid~~G~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 255 VDCAVDAVGFEARGHGHEGAKHEAP---ATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp EEEEEECCCTTCBCSSTTGGGSBCT---THHHHHHHHHEEEEEEEEECSC
T ss_pred CCEEEECCCCcccccccccccccch---HHHHHHHHHHHhcCCEEEEecc
Confidence 88888433211 22222 2378999999999999987653
No 310
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=88.88 E-value=3.2 Score=41.50 Aligned_cols=139 Identities=13% Similarity=0.122 Sum_probs=71.5
Q ss_pred eEEEECCCCcHHHHHHhhCCC--E-EEEEecCCChhHHHHHHHh-CCCCeeeecccCCC---CCCCccchheeccc---c
Q 046488 328 IGLDFSIGTGTFAARMREFNV--T-LVSAIINLGAPFNEMIALR-GLVPLYITINQRVP---FFDNTLDLIHTTRF---L 397 (480)
Q Consensus 328 ~VLDVGCGtG~fAa~Lae~gV--~-Vv~vd~d~~~~~~~~iA~r-glip~~~~~ae~LP---Fpd~SFDlV~ss~v---L 397 (480)
+|||+-||.|.++..+.+.|+ . +.+++.+ ..+....... .....+.++...+. ++...+|+|+...= +
T Consensus 4 ~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d--~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~f 81 (343)
T 1g55_A 4 RVLELYSGVGGMHHALRESCIPAQVVAAIDVN--TVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPF 81 (343)
T ss_dssp EEEEETCTTCHHHHHHHHHTCSEEEEEEECCC--HHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC----
T ss_pred eEEEeCcCccHHHHHHHHCCCCceEEEEEeCC--HHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcch
Confidence 799999999999999998883 3 4455443 3333333322 12334445444432 11225899987522 1
Q ss_pred cCccC----hhcHHHHHHHHHhcc---c--CCcEEE--EeeccCChhhHHHHHHHHHHcCceeeEEEEeeccC----CCC
Q 046488 398 DGWID----FVLLDFILYDWDRVL---R--PGGLLW--IDSFFCAKEDMNDYLEVFKMLKYKKHKWVVVPKRD----KDD 462 (480)
Q Consensus 398 ~h~~d----~~~l~~~L~EI~RVL---K--PGG~fi--I~~f~~~~edL~~~~~~l~~lGfkkl~W~~~~k~d----~~~ 462 (480)
..... .+....++.|+.|++ + |--.++ +..+. ....++.+.+.++.+||. +.|.+..-.+ +.+
T Consensus 82 S~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~l~-~~~~~~~i~~~l~~~GY~-v~~~vl~a~~~GvPQ~R 159 (343)
T 1g55_A 82 TRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFE-VSSTRDLLIQTIENCGFQ-YQEFLLSPTSLGIPNSR 159 (343)
T ss_dssp --------------CHHHHHHHHGGGCSSCCSEEEEEEETTGG-GSHHHHHHHHHHHHTTEE-EEEEEECGGGGTCSCCC
T ss_pred hhcCCcCCccCccchHHHHHHHHHHHhcCCCCEEEEeCCcccc-CHHHHHHHHHHHHHCCCe-eEEEEEEHHHCCCCCcc
Confidence 11100 010123555555554 5 654333 22332 234456778888999996 4565543322 234
Q ss_pred cceeEEEE
Q 046488 463 REVFFSAV 470 (480)
Q Consensus 463 ~E~~lsav 470 (480)
.-+|+.++
T Consensus 160 ~R~~iv~~ 167 (343)
T 1g55_A 160 LRYFLIAK 167 (343)
T ss_dssp CEEEEEEE
T ss_pred cEEEEEEE
Confidence 44555553
No 311
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=88.47 E-value=1.1 Score=44.11 Aligned_cols=92 Identities=20% Similarity=0.138 Sum_probs=56.3
Q ss_pred CCCCCCCCeEEEECCCC-cHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCCCCccchheecccc
Q 046488 320 DIKPGEIRIGLDFSIGT-GTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFDNTLDLIHTTRFL 397 (480)
Q Consensus 320 ~l~~g~iR~VLDVGCGt-G~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFpd~SFDlV~ss~vL 397 (480)
++++|+ +||-+|+|. |.++..+++ .|..++.++.+. ... ..+++-+....+...+.+ .+.+|+|+-.-.
T Consensus 173 ~~~~g~--~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~--~~~-~~~~~lGa~~v~~~~~~~---~~~~D~vid~~g- 243 (348)
T 3two_A 173 KVTKGT--KVGVAGFGGLGSMAVKYAVAMGAEVSVFARNE--HKK-QDALSMGVKHFYTDPKQC---KEELDFIISTIP- 243 (348)
T ss_dssp TCCTTC--EEEEESCSHHHHHHHHHHHHTTCEEEEECSSS--TTH-HHHHHTTCSEEESSGGGC---CSCEEEEEECCC-
T ss_pred CCCCCC--EEEEECCcHHHHHHHHHHHHCCCeEEEEeCCH--HHH-HHHHhcCCCeecCCHHHH---hcCCCEEEECCC-
Confidence 566665 788899875 777777776 488888877553 222 233343333332222222 126888874322
Q ss_pred cCccChhcHHHHHHHHHhcccCCcEEEEeec
Q 046488 398 DGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 398 ~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
.. ..+.+..+.|||||++++...
T Consensus 244 ----~~----~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 244 ----TH----YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp ----SC----CCHHHHHTTEEEEEEEEECCC
T ss_pred ----cH----HHHHHHHHHHhcCCEEEEECC
Confidence 12 147888999999999988643
No 312
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=88.38 E-value=11 Score=37.47 Aligned_cols=138 Identities=14% Similarity=0.131 Sum_probs=71.3
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEE-EecCCChhHHHHHHHh-CCCCeeeecccCCCC-CCCccchheecccccC----
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVS-AIINLGAPFNEMIALR-GLVPLYITINQRVPF-FDNTLDLIHTTRFLDG---- 399 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~-vd~d~~~~~~~~iA~r-glip~~~~~ae~LPF-pd~SFDlV~ss~vL~h---- 399 (480)
.+|||+-||.|.++..+.+.|..++. ++.+ ..+....... .... .++...+.- .-..+|+|+...=-..
T Consensus 12 ~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d--~~a~~t~~~N~~~~~--~~Di~~~~~~~~~~~D~l~~gpPCQ~fS~a 87 (327)
T 2c7p_A 12 LRFIDLFAGLGGFRLALESCGAECVYSNEWD--KYAQEVYEMNFGEKP--EGDITQVNEKTIPDHDILCAGFPCQAFSIS 87 (327)
T ss_dssp CEEEEETCTTTHHHHHHHHTTCEEEEEECCC--HHHHHHHHHHHSCCC--BSCGGGSCGGGSCCCSEEEEECCCTTTCTT
T ss_pred CcEEEECCCcCHHHHHHHHCCCeEEEEEeCC--HHHHHHHHHHcCCCC--cCCHHHcCHhhCCCCCEEEECCCCCCcchh
Confidence 47999999999999999999987643 3333 3333322222 1111 333222211 1124899986421111
Q ss_pred -----ccC-hhcHHHHHHHHHhcccCCcEEEEe---eccCC--hhhHHHHHHHHHHcCceeeEEEEeeccC----CCCcc
Q 046488 400 -----WID-FVLLDFILYDWDRVLRPGGLLWID---SFFCA--KEDMNDYLEVFKMLKYKKHKWVVVPKRD----KDDRE 464 (480)
Q Consensus 400 -----~~d-~~~l~~~L~EI~RVLKPGG~fiI~---~f~~~--~edL~~~~~~l~~lGfkkl~W~~~~k~d----~~~~E 464 (480)
..+ +..+-.-+.++.+.+||- +|++- ++... ...++.+...++.+||. +.|.+..-.+ +.+.-
T Consensus 88 g~~~g~~d~r~~L~~~~~r~i~~~~P~-~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~-v~~~vl~a~~~GvPQ~R~R 165 (327)
T 2c7p_A 88 GKQKGFEDSRGTLFFDIARIVREKKPK-VVFMENVKNFASHDNGNTLEVVKNTMNELDYS-FHAKVLNALDYGIPQKRER 165 (327)
T ss_dssp SCCCGGGSTTSCHHHHHHHHHHHHCCS-EEEEEEEGGGGTGGGGHHHHHHHHHHHHTTBC-CEEEEEEGGGGTCSBCCEE
T ss_pred cccCCCcchhhHHHHHHHHHHHhccCc-EEEEeCcHHHHhccccHHHHHHHHHHHhCCCE-EEEEEEEHHHcCCCccceE
Confidence 112 111222233344446886 33443 23322 23456788889999996 5566543322 13445
Q ss_pred eeEEEE
Q 046488 465 VFFSAV 470 (480)
Q Consensus 465 ~~lsav 470 (480)
+|+.++
T Consensus 166 ~~iv~~ 171 (327)
T 2c7p_A 166 IYMICF 171 (327)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 555554
No 313
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=87.02 E-value=1 Score=45.15 Aligned_cols=91 Identities=16% Similarity=0.171 Sum_probs=54.9
Q ss_pred CCCCCCCCeEEEECCCC-cHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeec-----ccCCCCCCCccchhe
Q 046488 320 DIKPGEIRIGLDFSIGT-GTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITI-----NQRVPFFDNTLDLIH 392 (480)
Q Consensus 320 ~l~~g~iR~VLDVGCGt-G~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~-----ae~LPFpd~SFDlV~ 392 (480)
++++|+ +||-+|+|. |.++..+++ .|..++.++.+. ...+.+..-| ....+.. .+.+. +.+|+|+
T Consensus 191 ~~~~g~--~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~--~~~~~a~~lG-a~~vi~~~~~~~~~~~~---~g~Dvvi 262 (369)
T 1uuf_A 191 QAGPGK--KVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSE--AKREAAKALG-ADEVVNSRNADEMAAHL---KSFDFIL 262 (369)
T ss_dssp TCCTTC--EEEEECCSHHHHHHHHHHHHTTCEEEEEESSG--GGHHHHHHHT-CSEEEETTCHHHHHTTT---TCEEEEE
T ss_pred CCCCCC--EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHcC-CcEEeccccHHHHHHhh---cCCCEEE
Confidence 566665 799999874 777777776 488887777542 2222222223 2222221 22222 4688887
Q ss_pred ecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 393 TTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 393 ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
-.-. .. ..+.+..+.|||||.+++..
T Consensus 263 d~~g-----~~----~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 263 NTVA-----AP----HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp ECCS-----SC----CCHHHHHTTEEEEEEEEECC
T ss_pred ECCC-----CH----HHHHHHHHHhccCCEEEEec
Confidence 4322 11 14778889999999988754
No 314
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=86.50 E-value=1.9 Score=42.12 Aligned_cols=95 Identities=12% Similarity=0.023 Sum_probs=55.2
Q ss_pred hcCCCCCCCCeEEEECC--CCcHHHHHHhh-CCCEEEEEecCCChhHHHHHHH-hCCCCeeeecccCCCC-------CCC
Q 046488 318 VLDIKPGEIRIGLDFSI--GTGTFAARMRE-FNVTLVSAIINLGAPFNEMIAL-RGLVPLYITINQRVPF-------FDN 386 (480)
Q Consensus 318 vL~l~~g~iR~VLDVGC--GtG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~-rglip~~~~~ae~LPF-------pd~ 386 (480)
..++++++ +||-+|+ |.|..+..++. .|..++.++.+ +.....++ +-+.....+....-.+ ..+
T Consensus 150 ~~~~~~g~--~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~---~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~ 224 (345)
T 2j3h_A 150 VCSPKEGE--TVYVSAASGAVGQLVGQLAKMMGCYVVGSAGS---KEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPN 224 (345)
T ss_dssp TSCCCTTC--EEEESSTTSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTT
T ss_pred HhCCCCCC--EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCC
Confidence 34455664 8999997 56777776665 58888877654 22223333 3223322221110000 124
Q ss_pred ccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 387 TLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 387 SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
.+|+|+.+.. ...+.+..+.|+|||++++..
T Consensus 225 ~~d~vi~~~g----------~~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 225 GIDIYFENVG----------GKMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp CEEEEEESSC----------HHHHHHHHTTEEEEEEEEECC
T ss_pred CCcEEEECCC----------HHHHHHHHHHHhcCCEEEEEc
Confidence 5887774322 126888999999999988754
No 315
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=86.45 E-value=1.8 Score=42.13 Aligned_cols=94 Identities=11% Similarity=-0.041 Sum_probs=53.8
Q ss_pred cCCCCCCCCeEEEECC--CCcHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeeccc--CC-----CCCCCcc
Q 046488 319 LDIKPGEIRIGLDFSI--GTGTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITINQ--RV-----PFFDNTL 388 (480)
Q Consensus 319 L~l~~g~iR~VLDVGC--GtG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae--~L-----PFpd~SF 388 (480)
.+++++ ++||-+|+ |.|..++.++. .|..++.++.+. ...+.. ++-+.....+... .+ -...+.+
T Consensus 141 ~~~~~g--~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~--~~~~~~-~~~g~~~~~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 141 CGVKGG--ETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSD--EKIAYL-KQIGFDAAFNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp SCCCSS--CEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSH--HHHHHH-HHTTCSEEEETTSCSCHHHHHHHHCTTCE
T ss_pred hCCCCC--CEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCH--HHHHHH-HhcCCcEEEecCCHHHHHHHHHHHhCCCC
Confidence 345555 48999998 56666665554 588888776542 222222 3322222222111 00 0011468
Q ss_pred chheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 389 DLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 389 DlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
|+|+.+.. ...+.+..+.|||||++++..
T Consensus 216 d~vi~~~g----------~~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 216 DCYFDNVG----------GEFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EEEEESSC----------HHHHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCC----------hHHHHHHHHHHhcCCEEEEEe
Confidence 88775332 125788899999999988764
No 316
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=86.18 E-value=2.5 Score=42.03 Aligned_cols=95 Identities=13% Similarity=0.053 Sum_probs=54.4
Q ss_pred cCCCCCCCCeEEEECCCC-cHHHHHHhh-CCC-EEEEEecCCChhHHHHHHHhCCCCeeeeccc---CC-----CCCCCc
Q 046488 319 LDIKPGEIRIGLDFSIGT-GTFAARMRE-FNV-TLVSAIINLGAPFNEMIALRGLVPLYITINQ---RV-----PFFDNT 387 (480)
Q Consensus 319 L~l~~g~iR~VLDVGCGt-G~fAa~Lae-~gV-~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae---~L-----PFpd~S 387 (480)
.++.+|+ +||-+|+|. |.++..+++ .|. .++.++.+. .. ...+++-+....+...+ .+ ....+.
T Consensus 188 ~~~~~g~--~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~--~~-~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g 262 (374)
T 1cdo_A 188 AKVEPGS--TCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNP--DK-FEKAKVFGATDFVNPNDHSEPISQVLSKMTNGG 262 (374)
T ss_dssp TCCCTTC--EEEEECCSHHHHHHHHHHHHTTCSEEEEECSCG--GG-HHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSC
T ss_pred cCCCCCC--EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCH--HH-HHHHHHhCCceEEeccccchhHHHHHHHHhCCC
Confidence 3455664 799999864 667777776 487 677776442 22 23333333332222111 00 001135
Q ss_pred cchheecccccCccChhcHHHHHHHHHhcccCC-cEEEEee
Q 046488 388 LDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPG-GLLWIDS 427 (480)
Q Consensus 388 FDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPG-G~fiI~~ 427 (480)
+|+|+-.-. . ...+.+..+.|||| |++++..
T Consensus 263 ~D~vid~~g-----~----~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 263 VDFSLECVG-----N----VGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp BSEEEECSC-----C----HHHHHHHHHTBCTTTCEEEECS
T ss_pred CCEEEECCC-----C----HHHHHHHHHHhhcCCcEEEEEc
Confidence 787774221 1 23688999999999 9988764
No 317
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=85.91 E-value=1.8 Score=42.25 Aligned_cols=95 Identities=13% Similarity=-0.040 Sum_probs=57.0
Q ss_pred HhcCCCCCCCCeEEEECC--CCcHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeec--------ccCCCCCC
Q 046488 317 EVLDIKPGEIRIGLDFSI--GTGTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITI--------NQRVPFFD 385 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGC--GtG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~--------ae~LPFpd 385 (480)
+...+++++ +||-+|+ |.|..+..++. .|..++.++.+. ...+.++++-+....+.. ..++. .
T Consensus 143 ~~~~~~~g~--~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~ 216 (336)
T 4b7c_A 143 DVGQPKNGE--TVVISGAAGAVGSVAGQIARLKGCRVVGIAGGA--EKCRFLVEELGFDGAIDYKNEDLAAGLKREC--P 216 (336)
T ss_dssp HTTCCCTTC--EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH--HHHHHHHHTTCCSEEEETTTSCHHHHHHHHC--T
T ss_pred HhcCCCCCC--EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHHcCCCEEEECCCHHHHHHHHHhc--C
Confidence 344566664 8999998 56777776665 588888877541 222223233333332221 11111 3
Q ss_pred CccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 386 NTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 386 ~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
+.+|+|+.+-. ...+.+..+.|+|||++++..
T Consensus 217 ~~~d~vi~~~g----------~~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 217 KGIDVFFDNVG----------GEILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp TCEEEEEESSC----------HHHHHHHHTTEEEEEEEEECC
T ss_pred CCceEEEECCC----------cchHHHHHHHHhhCCEEEEEe
Confidence 46888874322 126889999999999998764
No 318
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=85.78 E-value=2.7 Score=42.59 Aligned_cols=110 Identities=13% Similarity=0.092 Sum_probs=62.9
Q ss_pred hhhhhHHHhc-CCCCCCCCeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHH-HHHHHhCCCCeeeecccCCCCCCCc
Q 046488 310 TADFLIPEVL-DIKPGEIRIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFN-EMIALRGLVPLYITINQRVPFFDNT 387 (480)
Q Consensus 310 ~ad~~I~~vL-~l~~g~iR~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~-~~iA~rglip~~~~~ae~LPFpd~S 387 (480)
.+|.|+-+-+ ++..+ .+||.+|-+.|.++..|+..+++.++ +--.++.+. ...+..+.-+..+.....+.-....
T Consensus 24 a~d~~ll~~~~~~~~~--~~~~~~~d~~gal~~~~~~~~~~~~~-ds~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 100 (375)
T 4dcm_A 24 AADEYLLQQLDDTEIR--GPVLILNDAFGALSCALAEHKPYSIG-DSYISELATRENLRLNGIDESSVKFLDSTADYPQQ 100 (375)
T ss_dssp HHHHHHHHTTTTCCCC--SCEEEECCSSSHHHHHTGGGCCEEEE-SCHHHHHHHHHHHHHTTCCGGGSEEEETTSCCCSS
T ss_pred hHHHHHHHhhhhccCC--CCEEEECCCCCHHHHhhccCCceEEE-hHHHHHHHHHHHHHHcCCCccceEecccccccccC
Confidence 4566654332 23222 36999999999999999877776542 100111111 1233333322111122223334567
Q ss_pred cchheecccccCcc-ChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 388 LDLIHTTRFLDGWI-DFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 388 FDlV~ss~vL~h~~-d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
||+|+. .++ ....+...|.++...|+||+.+++.+
T Consensus 101 ~~~v~~-----~lpk~~~~l~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 101 PGVVLI-----KVPKTLALLEQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp CSEEEE-----ECCSCHHHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred CCEEEE-----EcCCCHHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 898874 233 33345678899999999999987764
No 319
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=85.58 E-value=2.8 Score=41.64 Aligned_cols=95 Identities=11% Similarity=-0.021 Sum_probs=55.2
Q ss_pred cCCCCCCCCeEEEECCCC-cHHHHHHhhC-CC-EEEEEecCCChhHHHHHHHhCCCCeeeeccc---CC-----CCCCCc
Q 046488 319 LDIKPGEIRIGLDFSIGT-GTFAARMREF-NV-TLVSAIINLGAPFNEMIALRGLVPLYITINQ---RV-----PFFDNT 387 (480)
Q Consensus 319 L~l~~g~iR~VLDVGCGt-G~fAa~Lae~-gV-~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae---~L-----PFpd~S 387 (480)
.++++|+ +||-+|+|. |.++..+++. |. .++.++.+. .. ...+++-+....+...+ .+ ...++.
T Consensus 187 ~~~~~g~--~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~--~~-~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg 261 (373)
T 1p0f_A 187 AKVTPGS--TCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHK--DK-FPKAIELGATECLNPKDYDKPIYEVICEKTNGG 261 (373)
T ss_dssp TCCCTTC--EEEEECCSHHHHHHHHHHHHHTCSEEEEECSCG--GG-HHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSC
T ss_pred cCCCCCC--EEEEECCCHHHHHHHHHHHHcCCCeEEEECCCH--HH-HHHHHHcCCcEEEecccccchHHHHHHHHhCCC
Confidence 3456665 799999874 6777777764 87 677776442 22 23333433332222110 00 011236
Q ss_pred cchheecccccCccChhcHHHHHHHHHhcccCC-cEEEEee
Q 046488 388 LDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPG-GLLWIDS 427 (480)
Q Consensus 388 FDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPG-G~fiI~~ 427 (480)
||+|+-.-. . ...+.+..+.|+|| |++++..
T Consensus 262 ~Dvvid~~g-----~----~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 262 VDYAVECAG-----R----IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp BSEEEECSC-----C----HHHHHHHHHTBCTTTCEEEECC
T ss_pred CCEEEECCC-----C----HHHHHHHHHHHhcCCCEEEEEc
Confidence 888874221 1 23688999999999 9988754
No 320
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=85.13 E-value=1.6 Score=43.00 Aligned_cols=97 Identities=16% Similarity=0.115 Sum_probs=57.2
Q ss_pred HhcCCCCCCCCeEEEECCCC-cHHHHHHhhC-CC-EEEEEecCCChhHHHHHHHhCCCCeeeec-cc----CC--CCCCC
Q 046488 317 EVLDIKPGEIRIGLDFSIGT-GTFAARMREF-NV-TLVSAIINLGAPFNEMIALRGLVPLYITI-NQ----RV--PFFDN 386 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGt-G~fAa~Lae~-gV-~Vv~vd~d~~~~~~~~iA~rglip~~~~~-ae----~L--PFpd~ 386 (480)
+...+++|+ +||=+|+|. |.++..+++. |. .++.++.+ +.....+++-+....+.. .+ .+ -...+
T Consensus 160 ~~~~~~~g~--~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~---~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~ 234 (352)
T 3fpc_A 160 ELANIKLGD--TVCVIGIGPVGLMSVAGANHLGAGRIFAVGSR---KHCCDIALEYGATDIINYKNGDIVEQILKATDGK 234 (352)
T ss_dssp HHTTCCTTC--CEEEECCSHHHHHHHHHHHTTTCSSEEEECCC---HHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTC
T ss_pred HhcCCCCCC--EEEEECCCHHHHHHHHHHHHcCCcEEEEECCC---HHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCC
Confidence 345566665 788889875 7777777775 77 67777643 232334443233322221 11 00 01234
Q ss_pred ccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 387 TLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 387 SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
.||+|+-... .. ..+.+..+.|+|||++++..
T Consensus 235 g~D~v~d~~g-----~~----~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 235 GVDKVVIAGG-----DV----HTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp CEEEEEECSS-----CT----THHHHHHHHEEEEEEEEECC
T ss_pred CCCEEEECCC-----Ch----HHHHHHHHHHhcCCEEEEec
Confidence 6888874321 22 26899999999999988753
No 321
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=85.00 E-value=3.1 Score=41.38 Aligned_cols=95 Identities=15% Similarity=-0.017 Sum_probs=54.5
Q ss_pred cCCCCCCCCeEEEECCCC-cHHHHHHhh-CCC-EEEEEecCCChhHHHHHHHhCCCCeeeeccc---CC-----CCCCCc
Q 046488 319 LDIKPGEIRIGLDFSIGT-GTFAARMRE-FNV-TLVSAIINLGAPFNEMIALRGLVPLYITINQ---RV-----PFFDNT 387 (480)
Q Consensus 319 L~l~~g~iR~VLDVGCGt-G~fAa~Lae-~gV-~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae---~L-----PFpd~S 387 (480)
.++++|+ +||-+|+|. |.++..+++ .|. .++.++.+. .. ...+++-+....+...+ .+ -..++.
T Consensus 191 ~~~~~g~--~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~--~~-~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g 265 (376)
T 1e3i_A 191 AKVTPGS--TCAVFGLGCVGLSAIIGCKIAGASRIIAIDING--EK-FPKAKALGATDCLNPRELDKPVQDVITELTAGG 265 (376)
T ss_dssp SCCCTTC--EEEEECCSHHHHHHHHHHHHTTCSEEEEECSCG--GG-HHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSC
T ss_pred cCCCCCC--EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCH--HH-HHHHHHhCCcEEEccccccchHHHHHHHHhCCC
Confidence 3455664 799999874 677777776 487 677776542 22 23333333332222111 00 001136
Q ss_pred cchheecccccCccChhcHHHHHHHHHhcccCC-cEEEEee
Q 046488 388 LDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPG-GLLWIDS 427 (480)
Q Consensus 388 FDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPG-G~fiI~~ 427 (480)
+|+|+-.-. . ...+.+..+.|+|| |++++..
T Consensus 266 ~Dvvid~~G-----~----~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 266 VDYSLDCAG-----T----AQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp BSEEEESSC-----C----HHHHHHHHHTBCTTTCEEEECC
T ss_pred ccEEEECCC-----C----HHHHHHHHHHhhcCCCEEEEEC
Confidence 787773221 1 23788999999999 9988753
No 322
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=84.91 E-value=3 Score=41.48 Aligned_cols=95 Identities=11% Similarity=-0.021 Sum_probs=54.6
Q ss_pred cCCCCCCCCeEEEECCCC-cHHHHHHhh-CCC-EEEEEecCCChhHHHHHHHhCCCCeeeeccc---CC-----CCCCCc
Q 046488 319 LDIKPGEIRIGLDFSIGT-GTFAARMRE-FNV-TLVSAIINLGAPFNEMIALRGLVPLYITINQ---RV-----PFFDNT 387 (480)
Q Consensus 319 L~l~~g~iR~VLDVGCGt-G~fAa~Lae-~gV-~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae---~L-----PFpd~S 387 (480)
.++++++ +||-+|+|. |.++..+++ .|. .++.++.+. ... ..+++-+....+...+ .+ ...++.
T Consensus 187 ~~~~~g~--~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~--~~~-~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g 261 (374)
T 2jhf_A 187 AKVTQGS--TCAVFGLGGVGLSVIMGCKAAGAARIIGVDINK--DKF-AKAKEVGATECVNPQDYKKPIQEVLTEMSNGG 261 (374)
T ss_dssp TCCCTTC--EEEEECCSHHHHHHHHHHHHTTCSEEEEECSCG--GGH-HHHHHTTCSEEECGGGCSSCHHHHHHHHTTSC
T ss_pred cCCCCCC--EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCH--HHH-HHHHHhCCceEecccccchhHHHHHHHHhCCC
Confidence 3456664 799999865 667777776 487 677776442 222 2333333332222111 00 011236
Q ss_pred cchheecccccCccChhcHHHHHHHHHhcccCC-cEEEEee
Q 046488 388 LDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPG-GLLWIDS 427 (480)
Q Consensus 388 FDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPG-G~fiI~~ 427 (480)
+|+|+-.-. . ...+.+..+.|||| |++++..
T Consensus 262 ~D~vid~~g-----~----~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 262 VDFSFEVIG-----R----LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp BSEEEECSC-----C----HHHHHHHHHHBCTTTCEEEECS
T ss_pred CcEEEECCC-----C----HHHHHHHHHHhhcCCcEEEEec
Confidence 888774221 1 23688999999999 9988754
No 323
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=84.66 E-value=1.9 Score=46.78 Aligned_cols=62 Identities=16% Similarity=0.144 Sum_probs=37.6
Q ss_pred CCccchheecccccCccChhc-HHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEEE
Q 046488 385 DNTLDLIHTTRFLDGWIDFVL-LDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKWV 453 (480)
Q Consensus 385 d~SFDlV~ss~vL~h~~d~~~-l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W~ 453 (480)
+..||+++... +..-.+++. -..+|.++.|++||||.+.- +.+. ......+...||...++.
T Consensus 169 ~~~~da~flD~-f~p~~np~~w~~~~~~~l~~~~~~g~~~~t--~~~~----~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 169 NNQVDAWFLDG-FAPAKNPDMWNEQLFNAMARMTRPGGTFST--FTAA----GFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp TTCEEEEEECS-SCC--CCTTCSHHHHHHHHHHEEEEEEEEE--SCCC----HHHHHHHHHTTCEEEEEE
T ss_pred CCceeEEEECC-CCCCCChhhhhHHHHHHHHHHhCCCCEEEe--ccCc----HHHHHHHHhCCeEEEecc
Confidence 57899998633 222111110 13589999999999998654 2222 234556778899755443
No 324
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=84.46 E-value=0.84 Score=44.27 Aligned_cols=90 Identities=10% Similarity=-0.054 Sum_probs=52.3
Q ss_pred hcCCCCCCCCeEEEECCC-CcHHHHHHhhC-CCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCCCCccchheecc
Q 046488 318 VLDIKPGEIRIGLDFSIG-TGTFAARMREF-NVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFDNTLDLIHTTR 395 (480)
Q Consensus 318 vL~l~~g~iR~VLDVGCG-tG~fAa~Lae~-gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFpd~SFDlV~ss~ 395 (480)
..++++|+ +||=+|+| .|.++..+++. |+.++.++ +.. ..+ .+++-+....+.+.+++ .+.+|+|+-.-
T Consensus 137 ~~~~~~g~--~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~--~~~-~~~~lGa~~v~~d~~~v---~~g~Dvv~d~~ 207 (315)
T 3goh_A 137 KIPLTKQR--EVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASL--SQA-LAAKRGVRHLYREPSQV---TQKYFAIFDAV 207 (315)
T ss_dssp TSCCCSCC--EEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSC--CHH-HHHHHTEEEEESSGGGC---CSCEEEEECC-
T ss_pred hcCCCCCC--EEEEECCCHHHHHHHHHHHHcCCEEEEEE-Chh--hHH-HHHHcCCCEEEcCHHHh---CCCccEEEECC
Confidence 34455664 89999986 37777777764 88888887 532 222 22332222222113344 56788887422
Q ss_pred cccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 396 FLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 396 vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
. .. .+.+..+.|+|||+++..
T Consensus 208 g-----~~-----~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 208 N-----SQ-----NAAALVPSLKANGHIICI 228 (315)
T ss_dssp ----------------TTGGGEEEEEEEEEE
T ss_pred C-----ch-----hHHHHHHHhcCCCEEEEE
Confidence 1 11 246778999999998875
No 325
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=84.32 E-value=1.5 Score=43.15 Aligned_cols=94 Identities=11% Similarity=0.065 Sum_probs=54.5
Q ss_pred CCCCCCCCeEEEECC--CCcHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeecc--cCCC-----CCCCccc
Q 046488 320 DIKPGEIRIGLDFSI--GTGTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITIN--QRVP-----FFDNTLD 389 (480)
Q Consensus 320 ~l~~g~iR~VLDVGC--GtG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~a--e~LP-----Fpd~SFD 389 (480)
++++++ +||-+|+ |.|..++.++. .|..++.++.+.. .. ..+++-+.....+.. +.+. ..++.+|
T Consensus 166 ~~~~g~--~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~--~~-~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D 240 (347)
T 2hcy_A 166 NLMAGH--WVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEG--KE-ELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAH 240 (347)
T ss_dssp TCCTTC--EEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTT--HH-HHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEE
T ss_pred CCCCCC--EEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHH--HH-HHHHHcCCceEEecCccHhHHHHHHHHhCCCCC
Confidence 455554 8999998 56777666655 5888888775532 22 233332222222211 1100 0012578
Q ss_pred hheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 390 LIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 390 lV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
+|+.+.. . ...+.+..+.|+|||++++..
T Consensus 241 ~vi~~~g-----~----~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 241 GVINVSV-----S----EAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp EEEECSS-----C----HHHHHHHTTSEEEEEEEEECC
T ss_pred EEEECCC-----c----HHHHHHHHHHHhcCCEEEEEe
Confidence 7775332 1 237899999999999988754
No 326
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=84.31 E-value=1.5 Score=43.54 Aligned_cols=72 Identities=13% Similarity=0.140 Sum_probs=42.9
Q ss_pred CCCCccchheec--cccc---CccC------hhcHHHHHHHHHhcccCCcEEEEeecc---CC-----hhhHHHHHHHHH
Q 046488 383 FFDNTLDLIHTT--RFLD---GWID------FVLLDFILYDWDRVLRPGGLLWIDSFF---CA-----KEDMNDYLEVFK 443 (480)
Q Consensus 383 Fpd~SFDlV~ss--~vL~---h~~d------~~~l~~~L~EI~RVLKPGG~fiI~~f~---~~-----~edL~~~~~~l~ 443 (480)
+++++||+|++. +... .+.+ ...+...+.++.|+|||||.+++..-. .. ...+..+.++++
T Consensus 29 l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~~~~~~~~~~i~~~~~ 108 (323)
T 1boo_A 29 FPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVPARSIYNFRVLIRMID 108 (323)
T ss_dssp SCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTEEEECCHHHHHHHHHHH
T ss_pred CCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCCcccccchHHHHHHHHH
Confidence 447788888875 1111 1110 012467899999999999999885211 11 112445556778
Q ss_pred HcCceee---EEEE
Q 046488 444 MLKYKKH---KWVV 454 (480)
Q Consensus 444 ~lGfkkl---~W~~ 454 (480)
..||.-. -|..
T Consensus 109 ~~Gf~~~~~iiW~k 122 (323)
T 1boo_A 109 EVGFFLAEDFYWFN 122 (323)
T ss_dssp TTCCEEEEEEEEEC
T ss_pred hCCCEEEEEEEEec
Confidence 8898643 4754
No 327
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=84.30 E-value=2 Score=43.21 Aligned_cols=86 Identities=15% Similarity=0.150 Sum_probs=53.8
Q ss_pred Cccchheecccc----cCcc---Ch-hcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeEEEEeec
Q 046488 386 NTLDLIHTTRFL----DGWI---DF-VLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHKWVVVPK 457 (480)
Q Consensus 386 ~SFDlV~ss~vL----~h~~---d~-~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~W~~~~k 457 (480)
+.+|+|++..+- +|+. |. ..+..++.-..++|+|||.|++-.|.-.+..-+.++..+++ -|+..+-..-.-
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR-~F~~Vr~vKP~A 283 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYADRASESIIGAIAR-QFKFSRVCKPKS 283 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHT-TEEEEEEECCTT
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHH-hcceeeeeCCCC
Confidence 669999985432 2211 21 22345777888999999999998876553334556666666 377765433222
Q ss_pred cCCCCcceeEEEEEEe
Q 046488 458 RDKDDREVFFSAVLEK 473 (480)
Q Consensus 458 ~d~~~~E~~lsav~qK 473 (480)
. ....|+|+.|.--|
T Consensus 284 S-R~StEvf~La~gf~ 298 (320)
T 2hwk_A 284 S-LEETEVLFVFIGYD 298 (320)
T ss_dssp C-CSTTCEEEEEEEEC
T ss_pred c-cccceEEEEEEeec
Confidence 2 23689999876533
No 328
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=84.28 E-value=2.4 Score=41.63 Aligned_cols=95 Identities=17% Similarity=0.125 Sum_probs=54.3
Q ss_pred hcCCCCCCCCeEEEECCC--CcHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeecc-cCC------CCCCCc
Q 046488 318 VLDIKPGEIRIGLDFSIG--TGTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITIN-QRV------PFFDNT 387 (480)
Q Consensus 318 vL~l~~g~iR~VLDVGCG--tG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~a-e~L------PFpd~S 387 (480)
...+++|+ +||-+|+| .|..+..+++ .|..++.++.+.. ..+.+..-| ....+... +.+ -...+.
T Consensus 139 ~~~~~~g~--~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~--~~~~~~~lg-a~~~~~~~~~~~~~~~~~~~~~~g 213 (340)
T 3gms_A 139 TLNLQRND--VLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNK--HTEELLRLG-AAYVIDTSTAPLYETVMELTNGIG 213 (340)
T ss_dssp TSCCCTTC--EEEESSTTSHHHHHHHHHHHHHTCEEEEEESSST--THHHHHHHT-CSEEEETTTSCHHHHHHHHTTTSC
T ss_pred hcccCCCC--EEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHH--HHHHHHhCC-CcEEEeCCcccHHHHHHHHhCCCC
Confidence 34566664 89999987 5777777766 4888888876532 222222223 22222210 000 012346
Q ss_pred cchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 388 LDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 388 FDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
+|+|+-.-. . ..+.+..+.|||||.+++..
T Consensus 214 ~Dvvid~~g-----~-----~~~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 214 ADAAIDSIG-----G-----PDGNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp EEEEEESSC-----H-----HHHHHHHHTEEEEEEEEECC
T ss_pred CcEEEECCC-----C-----hhHHHHHHHhcCCCEEEEEe
Confidence 888874322 1 13445568999999998864
No 329
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=84.04 E-value=1.5 Score=43.67 Aligned_cols=94 Identities=12% Similarity=-0.051 Sum_probs=55.3
Q ss_pred cCCCCCCCCeEEEECCCC-cHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeecc-cCC------CCCCCccc
Q 046488 319 LDIKPGEIRIGLDFSIGT-GTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITIN-QRV------PFFDNTLD 389 (480)
Q Consensus 319 L~l~~g~iR~VLDVGCGt-G~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~a-e~L------PFpd~SFD 389 (480)
..+++|+ +||=+|+|. |.++..+++ .|+.++.++.+ +.....+++-+....+... +.+ -.....+|
T Consensus 185 ~~~~~g~--~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~---~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D 259 (363)
T 3uog_A 185 GHLRAGD--RVVVQGTGGVALFGLQIAKATGAEVIVTSSS---REKLDRAFALGADHGINRLEEDWVERVYALTGDRGAD 259 (363)
T ss_dssp TCCCTTC--EEEEESSBHHHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEE
T ss_pred cCCCCCC--EEEEECCCHHHHHHHHHHHHcCCEEEEEecC---chhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCce
Confidence 4456665 899999775 667777766 48888887754 2222333332333332210 000 01234689
Q ss_pred hheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 390 LIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 390 lV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
+|+-... .. .+.+..+.|+|||.+++..
T Consensus 260 ~vid~~g-----~~-----~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 260 HILEIAG-----GA-----GLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp EEEEETT-----SS-----CHHHHHHHEEEEEEEEEEC
T ss_pred EEEECCC-----hH-----HHHHHHHHhhcCCEEEEEe
Confidence 8875322 11 4778889999999998763
No 330
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=84.01 E-value=2.9 Score=41.43 Aligned_cols=95 Identities=14% Similarity=0.075 Sum_probs=54.0
Q ss_pred cCCCCCCCCeEEEECCCC-cHHHHHHhhC-CC-EEEEEecCCChhHHHHHHHhCCCCeeeeccc---CC-----CCCCCc
Q 046488 319 LDIKPGEIRIGLDFSIGT-GTFAARMREF-NV-TLVSAIINLGAPFNEMIALRGLVPLYITINQ---RV-----PFFDNT 387 (480)
Q Consensus 319 L~l~~g~iR~VLDVGCGt-G~fAa~Lae~-gV-~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae---~L-----PFpd~S 387 (480)
.++++|+ +||-+|+|. |.++..+++. |. .++.++.+. ...+ .+++-+....+...+ .+ ...++.
T Consensus 186 ~~~~~g~--~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~--~~~~-~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g 260 (373)
T 2fzw_A 186 AKLEPGS--VCAVFGLGGVGLAVIMGCKVAGASRIIGVDINK--DKFA-RAKEFGATECINPQDFSKPIQEVLIEMTDGG 260 (373)
T ss_dssp TCCCTTC--EEEEECCSHHHHHHHHHHHHHTCSEEEEECSCG--GGHH-HHHHHTCSEEECGGGCSSCHHHHHHHHTTSC
T ss_pred cCCCCCC--EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCH--HHHH-HHHHcCCceEeccccccccHHHHHHHHhCCC
Confidence 3455664 799999864 6677777764 87 677776442 2222 233322222222110 00 011236
Q ss_pred cchheecccccCccChhcHHHHHHHHHhcccCC-cEEEEee
Q 046488 388 LDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPG-GLLWIDS 427 (480)
Q Consensus 388 FDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPG-G~fiI~~ 427 (480)
+|+|+-... . ...+.+..+.|||| |++++..
T Consensus 261 ~D~vid~~g-----~----~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 261 VDYSFECIG-----N----VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp BSEEEECSC-----C----HHHHHHHHHTBCTTTCEEEECS
T ss_pred CCEEEECCC-----c----HHHHHHHHHhhccCCcEEEEEe
Confidence 888774321 1 23688999999999 9988754
No 331
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=83.23 E-value=3.5 Score=41.10 Aligned_cols=95 Identities=17% Similarity=0.115 Sum_probs=56.7
Q ss_pred cCCCCCCCCeEEEECCCC-cHHHHHHhhC-CC-EEEEEecCCChhHHHHHHHhCCCCeeeeccc-CCC-------CCCCc
Q 046488 319 LDIKPGEIRIGLDFSIGT-GTFAARMREF-NV-TLVSAIINLGAPFNEMIALRGLVPLYITINQ-RVP-------FFDNT 387 (480)
Q Consensus 319 L~l~~g~iR~VLDVGCGt-G~fAa~Lae~-gV-~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae-~LP-------Fpd~S 387 (480)
..+++|+ +||=+|+|. |.++..+++. |+ .++.++.+. .....+++-+....+...+ .-. ..++.
T Consensus 189 ~~~~~g~--~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~---~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg 263 (378)
T 3uko_A 189 AKVEPGS--NVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDS---KKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGG 263 (378)
T ss_dssp TCCCTTC--CEEEECCSHHHHHHHHHHHHHTCSCEEEECSCT---THHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSC
T ss_pred cCCCCCC--EEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCH---HHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCC
Confidence 3456664 788899873 7777777764 87 687776553 2333455433333322110 000 11236
Q ss_pred cchheecccccCccChhcHHHHHHHHHhcccCC-cEEEEee
Q 046488 388 LDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPG-GLLWIDS 427 (480)
Q Consensus 388 FDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPG-G~fiI~~ 427 (480)
||+|+-... . ...+.+..+.|||| |++++..
T Consensus 264 ~D~vid~~g-----~----~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 264 VDYSFECIG-----N----VSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp BSEEEECSC-----C----HHHHHHHHHTBCTTTCEEEECS
T ss_pred CCEEEECCC-----C----HHHHHHHHHHhhccCCEEEEEc
Confidence 888874321 2 23789999999997 9988764
No 332
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=82.95 E-value=4.1 Score=39.96 Aligned_cols=92 Identities=17% Similarity=0.107 Sum_probs=53.7
Q ss_pred CCCCCCCCeEEEECCC-CcHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCC------CCccchh
Q 046488 320 DIKPGEIRIGLDFSIG-TGTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFF------DNTLDLI 391 (480)
Q Consensus 320 ~l~~g~iR~VLDVGCG-tG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFp------d~SFDlV 391 (480)
++++++ +||-+|+| .|..+..+++ .|..++.++.+ +.....+++-+.....+... -.+. .+.+|+|
T Consensus 161 ~~~~g~--~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~lGa~~~~d~~~-~~~~~~~~~~~~~~d~v 234 (339)
T 1rjw_A 161 GAKPGE--WVAIYGIGGLGHVAVQYAKAMGLNVVAVDIG---DEKLELAKELGADLVVNPLK-EDAAKFMKEKVGGVHAA 234 (339)
T ss_dssp TCCTTC--EEEEECCSTTHHHHHHHHHHTTCEEEEECSC---HHHHHHHHHTTCSEEECTTT-SCHHHHHHHHHSSEEEE
T ss_pred CCCCCC--EEEEECCCHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHHCCCCEEecCCC-ccHHHHHHHHhCCCCEE
Confidence 566664 89999986 4777776665 48888877644 22223333323332222110 0000 0357877
Q ss_pred eecccccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 392 HTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 392 ~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
+-... . ...+.+..+.|+|||++++.
T Consensus 235 id~~g-----~----~~~~~~~~~~l~~~G~~v~~ 260 (339)
T 1rjw_A 235 VVTAV-----S----KPAFQSAYNSIRRGGACVLV 260 (339)
T ss_dssp EESSC-----C----HHHHHHHHHHEEEEEEEEEC
T ss_pred EECCC-----C----HHHHHHHHHHhhcCCEEEEe
Confidence 64321 1 23688999999999998875
No 333
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=82.43 E-value=14 Score=36.81 Aligned_cols=123 Identities=11% Similarity=0.088 Sum_probs=68.8
Q ss_pred CeEEEECCCCcHHHHHHhhCCC--EEE--EEecCCChhHHHHHHHhCCCCeeeecccCCC---CCCCccchheecccccC
Q 046488 327 RIGLDFSIGTGTFAARMREFNV--TLV--SAIINLGAPFNEMIALRGLVPLYITINQRVP---FFDNTLDLIHTTRFLDG 399 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV--~Vv--~vd~d~~~~~~~~iA~rglip~~~~~ae~LP---Fpd~SFDlV~ss~vL~h 399 (480)
-+++|+-||.|.+...+.+.|+ .++ +++.+ ..+.......-....+.++...+. ++...+|+++.+.-=..
T Consensus 11 ~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d--~~a~~ty~~N~~~~~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ~ 88 (327)
T 3qv2_A 11 VNVIEFFSGIGGLRSSYERSSININATFIPFDIN--EIANKIYSKNFKEEVQVKNLDSISIKQIESLNCNTWFMSPPCQP 88 (327)
T ss_dssp EEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCC--HHHHHHHHHHHCCCCBCCCTTTCCHHHHHHTCCCEEEECCCCTT
T ss_pred CEEEEECCChhHHHHHHHHcCCCceEEEEEEECC--HHHHHHHHHHCCCCcccCChhhcCHHHhccCCCCEEEecCCccC
Confidence 3799999999999999998885 444 55544 233333322211113334433332 12236899985421111
Q ss_pred c-----------cChhcHHHHHHHHHh-cc-----cCCcEEEEee---ccCChhhHHHHHHHHHHcCceeeEEEEee
Q 046488 400 W-----------IDFVLLDFILYDWDR-VL-----RPGGLLWIDS---FFCAKEDMNDYLEVFKMLKYKKHKWVVVP 456 (480)
Q Consensus 400 ~-----------~d~~~l~~~L~EI~R-VL-----KPGG~fiI~~---f~~~~edL~~~~~~l~~lGfkkl~W~~~~ 456 (480)
+ .+.. ..++.|+.| ++ ||- +|++-. +.. ....+.+.+.++.+||. +.|.+..
T Consensus 89 fs~S~ag~~~~~~d~r--~~L~~~~~r~~i~~~~~~P~-~~~lENV~gl~~-~~~~~~i~~~l~~~GY~-v~~~vl~ 160 (327)
T 3qv2_A 89 YNNSIMSKHKDINDPR--AKSVLHLYRDILPYLINKPK-HIFIENVPLFKE-SLVFKEIYNILIKNQYY-IKDIICS 160 (327)
T ss_dssp CSHHHHTTTCTTTCGG--GHHHHHHHHTTGGGCSSCCS-EEEEEECGGGGG-SHHHHHHHHHHHHTTCE-EEEEEEC
T ss_pred cccccCCCCCCCcccc--chhHHHHHHHHHHHhccCCC-EEEEEchhhhcC-hHHHHHHHHHHHhCCCE-EEEEEEe
Confidence 1 1221 457888888 65 453 334432 222 23456788889999997 5566543
No 334
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=82.09 E-value=2.3 Score=42.36 Aligned_cols=50 Identities=18% Similarity=0.163 Sum_probs=30.5
Q ss_pred HHHHHHHHHhcccCCcEEEEee-ccCC----hhhHHHHHHHHHHcC-cee---eEEEEe
Q 046488 406 LDFILYDWDRVLRPGGLLWIDS-FFCA----KEDMNDYLEVFKMLK-YKK---HKWVVV 455 (480)
Q Consensus 406 l~~~L~EI~RVLKPGG~fiI~~-f~~~----~edL~~~~~~l~~lG-fkk---l~W~~~ 455 (480)
+...|.|+.|+|+|||.+++.. +... ...+..+...+...| |.- +-|...
T Consensus 85 ~~~~l~~~~rvLk~~G~i~i~~~~~~~~~~~~~~l~~l~~~i~~~G~~~~~~~IIW~K~ 143 (319)
T 1eg2_A 85 AKRWLAEAERVLSPTGSIAIFGGLQYQGEAGSGDLISIISHMRQNSKMLLANLIIWNYP 143 (319)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEECSCCCCCTTBCCHHHHHHHHHHHCCCEEEEEEEEECS
T ss_pred HHHHHHHHHHHcCCCeEEEEEcCcccccccccccHHHHHHHHhCcccceeEEEEEEECC
Confidence 3568899999999999998863 2111 122344455555556 543 447643
No 335
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=81.39 E-value=39 Score=32.55 Aligned_cols=137 Identities=12% Similarity=0.181 Sum_probs=74.8
Q ss_pred eEEEECCCCcHHHHHHhhCCCEEE-EEecCCChhHHHHHHHhCCCCeeeecccCCCCC-CCccchheecc---ccc----
Q 046488 328 IGLDFSIGTGTFAARMREFNVTLV-SAIINLGAPFNEMIALRGLVPLYITINQRVPFF-DNTLDLIHTTR---FLD---- 398 (480)
Q Consensus 328 ~VLDVGCGtG~fAa~Lae~gV~Vv-~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFp-d~SFDlV~ss~---vL~---- 398 (480)
+|||+=||.|.+...|.+.|+.++ +++.+. .+.......-....+.++...+... -..+|+++... .++
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~--~a~~ty~~N~~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS~ag~ 79 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDK--SIWKTYESNHSAKLIKGDISKISSDEFPKCDGIIGGPPSQSWSEGGS 79 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCT--TTHHHHHHHCCSEEEESCGGGCCGGGSCCCSEEECCCCGGGTEETTE
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCH--HHHHHHHHHCCCCcccCChhhCCHhhCCcccEEEecCCCCCcCCCCC
Confidence 699999999999999988898775 344442 3333333332223444443333211 12588888532 111
Q ss_pred --CccChhcHHHHHHHHHhc---ccCCcEEEEe---eccC--ChhhHHHHHHHHHHcCceeeEEEEeeccC----CCCcc
Q 046488 399 --GWIDFVLLDFILYDWDRV---LRPGGLLWID---SFFC--AKEDMNDYLEVFKMLKYKKHKWVVVPKRD----KDDRE 464 (480)
Q Consensus 399 --h~~d~~~l~~~L~EI~RV---LKPGG~fiI~---~f~~--~~edL~~~~~~l~~lGfkkl~W~~~~k~d----~~~~E 464 (480)
...+.. ..++.|+.|+ +||- +|++- ++.. ....++.+...++.+||. +.|.+..-.+ +.+.-
T Consensus 80 ~~g~~d~R--~~L~~~~~r~i~~~~Pk-~~~~ENV~gl~~~~~~~~~~~i~~~l~~~GY~-v~~~vlna~~yGvPQ~R~R 155 (331)
T 3ubt_Y 80 LRGIDDPR--GKLFYEYIRILKQKKPI-FFLAENVKGMMAQRHNKAVQEFIQEFDNAGYD-VHIILLNANDYGVAQDRKR 155 (331)
T ss_dssp ECCTTCGG--GHHHHHHHHHHHHHCCS-EEEEEECCGGGGCTTSHHHHHHHHHHHHHTEE-EEEEEEEGGGTTCSBCCEE
T ss_pred ccCCCCch--hHHHHHHHHHHhccCCe-EEEeeeecccccccccchhhhhhhhhccCCcE-EEEEecccccCCCCcccce
Confidence 112221 3455555555 6886 33443 2332 234467788889999997 5566543322 23444
Q ss_pred eeEEEE
Q 046488 465 VFFSAV 470 (480)
Q Consensus 465 ~~lsav 470 (480)
+|+.++
T Consensus 156 vfivg~ 161 (331)
T 3ubt_Y 156 VFYIGF 161 (331)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 555543
No 336
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=81.35 E-value=2.7 Score=41.18 Aligned_cols=94 Identities=7% Similarity=0.024 Sum_probs=55.8
Q ss_pred CCCCCCCCeEEEECCCC-cHHHHHHhhC--CCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCC------CCCCccch
Q 046488 320 DIKPGEIRIGLDFSIGT-GTFAARMREF--NVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVP------FFDNTLDL 390 (480)
Q Consensus 320 ~l~~g~iR~VLDVGCGt-G~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LP------Fpd~SFDl 390 (480)
.+++++ +||=+|+|. |.++..+++. +..++.++.+ +.....+++-+....+...+.+. .....+|+
T Consensus 168 ~~~~g~--~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~---~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~ 242 (345)
T 3jv7_A 168 LLGPGS--TAVVIGVGGLGHVGIQILRAVSAARVIAVDLD---DDRLALAREVGADAAVKSGAGAADAIRELTGGQGATA 242 (345)
T ss_dssp GCCTTC--EEEEECCSHHHHHHHHHHHHHCCCEEEEEESC---HHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEE
T ss_pred CCCCCC--EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC---HHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeE
Confidence 355664 789999875 7777777764 6778877654 33334444434433332111000 01235777
Q ss_pred heecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 391 IHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 391 V~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
|+-.- .. ...+.+..+.|+|||++++..
T Consensus 243 v~d~~-----G~----~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 243 VFDFV-----GA----QSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp EEESS-----CC----HHHHHHHHHHEEEEEEEEECS
T ss_pred EEECC-----CC----HHHHHHHHHHHhcCCEEEEEC
Confidence 76322 12 237899999999999998764
No 337
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=81.06 E-value=1.1 Score=44.60 Aligned_cols=93 Identities=15% Similarity=0.097 Sum_probs=53.8
Q ss_pred cCCCCCCCCeEEEECCCC-cHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeec------ccCCCCCCCccch
Q 046488 319 LDIKPGEIRIGLDFSIGT-GTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITI------NQRVPFFDNTLDL 390 (480)
Q Consensus 319 L~l~~g~iR~VLDVGCGt-G~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~------ae~LPFpd~SFDl 390 (480)
.++++|+ +||-+|+|. |.++..+++ .|..++.++.+.. ..+.+..-| ....+.. .+.+. +.||+
T Consensus 175 ~~~~~g~--~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~--~~~~~~~lG-a~~v~~~~~~~~~~~~~~---~~~D~ 246 (360)
T 1piw_A 175 NGCGPGK--KVGIVGLGGIGSMGTLISKAMGAETYVISRSSR--KREDAMKMG-ADHYIATLEEGDWGEKYF---DTFDL 246 (360)
T ss_dssp TTCSTTC--EEEEECCSHHHHHHHHHHHHHTCEEEEEESSST--THHHHHHHT-CSEEEEGGGTSCHHHHSC---SCEEE
T ss_pred cCCCCCC--EEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH--HHHHHHHcC-CCEEEcCcCchHHHHHhh---cCCCE
Confidence 4566664 899999863 677777776 4888888775432 222222223 2322221 11222 46888
Q ss_pred heecccccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 391 IHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 391 V~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
|+-...-. ... .+.+..+.|||||+++..
T Consensus 247 vid~~g~~---~~~----~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 247 IVVCASSL---TDI----DFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp EEECCSCS---TTC----CTTTGGGGEEEEEEEEEC
T ss_pred EEECCCCC---cHH----HHHHHHHHhcCCCEEEEe
Confidence 87533210 011 466778999999998864
No 338
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=80.76 E-value=15 Score=37.31 Aligned_cols=138 Identities=14% Similarity=-0.000 Sum_probs=72.9
Q ss_pred eEEEECCCCcHHHHHHhhCCCEEE-EEecCCChhHHHHHHHh-CCCCeeeecccCCC--------CCCCccchheeccc-
Q 046488 328 IGLDFSIGTGTFAARMREFNVTLV-SAIINLGAPFNEMIALR-GLVPLYITINQRVP--------FFDNTLDLIHTTRF- 396 (480)
Q Consensus 328 ~VLDVGCGtG~fAa~Lae~gV~Vv-~vd~d~~~~~~~~iA~r-glip~~~~~ae~LP--------Fpd~SFDlV~ss~v- 396 (480)
+|+|+-||.|.++..+.+.|..++ +++.+ ..+....... .....+.++...+. .....+|+|+..-=
T Consensus 4 ~vidLFsG~GGlslG~~~aG~~~v~avE~d--~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpPC 81 (376)
T 3g7u_A 4 NVIDLFSGVGGLSLGAARAGFDVKMAVEID--QHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPPC 81 (376)
T ss_dssp EEEEETCTTSHHHHHHHHHTCEEEEEECSC--HHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCCC
T ss_pred eEEEEccCcCHHHHHHHHCCCcEEEEEeCC--HHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCCC
Confidence 699999999999999998888765 44443 3343333322 12233344433332 13467999986421
Q ss_pred --ccCc----cChhcHHHHHHH---HHhcccCCcEEEEe---eccCCh--hhHHHHHHHHHHcCceeeEEEEeeccC---
Q 046488 397 --LDGW----IDFVLLDFILYD---WDRVLRPGGLLWID---SFFCAK--EDMNDYLEVFKMLKYKKHKWVVVPKRD--- 459 (480)
Q Consensus 397 --L~h~----~d~~~l~~~L~E---I~RVLKPGG~fiI~---~f~~~~--edL~~~~~~l~~lGfkkl~W~~~~k~d--- 459 (480)
++.. .++. ...++.| +.+.+||.-. ++- ++.... ..++.+. .++.+||.-..|.+..-.+
T Consensus 82 Q~fS~ag~~~~~d~-r~~L~~~~~~~v~~~~P~~~-v~ENV~gl~s~~~~~~~~~i~-~l~~~GY~v~~~~vl~a~dyGv 158 (376)
T 3g7u_A 82 QGFSSIGKGNPDDS-RNQLYMHFYRLVSELQPLFF-LAENVPGIMQEKYSGIRNKAF-NLVSGDYDILDPIKVKASDYGA 158 (376)
T ss_dssp CTTC-------CHH-HHHHHHHHHHHHHHHCCSEE-EEEECTTTTCGGGHHHHHHHH-HHHHTTEEECCCEEEEGGGGTC
T ss_pred CCcccccCCCCCCc-hHHHHHHHHHHHHHhCCCEE-EEecchHhhccCcHHHHHHHH-HHHcCCCccCcEEEEEHhhCCC
Confidence 1111 0111 1234444 4445678543 332 232211 2345666 8899999864566543322
Q ss_pred -CCCcceeEEEE
Q 046488 460 -KDDREVFFSAV 470 (480)
Q Consensus 460 -~~~~E~~lsav 470 (480)
+.+.-+|+.++
T Consensus 159 PQ~R~R~~iig~ 170 (376)
T 3g7u_A 159 PTIRTRYFFIGV 170 (376)
T ss_dssp SBCCEEEEEEEE
T ss_pred CCCCcEEEEEEE
Confidence 23445555554
No 339
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=80.34 E-value=2.9 Score=40.42 Aligned_cols=94 Identities=12% Similarity=-0.013 Sum_probs=54.9
Q ss_pred CCCCCCCCeEEEECC--CCcHHHHHHhhC-CCEEEEEecCCChhHHHHHHHhCCCCeeeeccc---CCCCCCCccchhee
Q 046488 320 DIKPGEIRIGLDFSI--GTGTFAARMREF-NVTLVSAIINLGAPFNEMIALRGLVPLYITINQ---RVPFFDNTLDLIHT 393 (480)
Q Consensus 320 ~l~~g~iR~VLDVGC--GtG~fAa~Lae~-gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae---~LPFpd~SFDlV~s 393 (480)
.+.+++.+ ||=.|+ |.|.++..+++. |..++.++.+. ... ..+++-+....+...+ ......+.+|+|+-
T Consensus 142 ~~~~~~g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~--~~~-~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d 217 (324)
T 3nx4_A 142 GIRPQDGE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRE--STH-GYLKSLGANRILSRDEFAESRPLEKQLWAGAID 217 (324)
T ss_dssp TCCGGGCC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCG--GGH-HHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEE
T ss_pred ccCCCCCe-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCH--HHH-HHHHhcCCCEEEecCCHHHHHhhcCCCccEEEE
Confidence 34444334 898886 567888888764 88888877542 222 2333322332222111 11122356887763
Q ss_pred cccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 394 TRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 394 s~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
.- . ...+.+..+.|+|||++++..
T Consensus 218 ~~------g----~~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 218 TV------G----DKVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp SS------C----HHHHHHHHHTEEEEEEEEECC
T ss_pred CC------C----cHHHHHHHHHHhcCCEEEEEe
Confidence 21 1 127899999999999998763
No 340
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=80.33 E-value=5.3 Score=39.72 Aligned_cols=86 Identities=13% Similarity=0.082 Sum_probs=53.8
Q ss_pred CeEEEEC-C-CCcHHHHHHhhC--CCEEEEEecCCChhHHHHHHHhCCCCeeeec-------ccCCCCCCCccchheecc
Q 046488 327 RIGLDFS-I-GTGTFAARMREF--NVTLVSAIINLGAPFNEMIALRGLVPLYITI-------NQRVPFFDNTLDLIHTTR 395 (480)
Q Consensus 327 R~VLDVG-C-GtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~-------ae~LPFpd~SFDlV~ss~ 395 (480)
.+||=+| + |.|.++..+++. |..++.++.+ +.....+++-+....+.. ...+ ..+.+|+|+-..
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~---~~~~~~~~~lGad~vi~~~~~~~~~v~~~--~~~g~Dvvid~~ 247 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATASR---PETQEWVKSLGAHHVIDHSKPLAAEVAAL--GLGAPAFVFSTT 247 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSS---HHHHHHHHHTTCSEEECTTSCHHHHHHTT--CSCCEEEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCC---HHHHHHHHHcCCCEEEeCCCCHHHHHHHh--cCCCceEEEECC
Confidence 4799888 4 458888888874 7888887754 233334444333333321 1122 345788877422
Q ss_pred cccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 396 FLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 396 vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
. . ...+.+..+.|+|||.+++.
T Consensus 248 g-----~----~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 248 H-----T----DKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp C-----H----HHHHHHHHHHSCTTCEEEEC
T ss_pred C-----c----hhhHHHHHHHhcCCCEEEEE
Confidence 1 1 23789999999999998875
No 341
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=79.93 E-value=6 Score=42.67 Aligned_cols=60 Identities=17% Similarity=0.156 Sum_probs=36.8
Q ss_pred CCccchheecccccCccChhc-HHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeE
Q 046488 385 DNTLDLIHTTRFLDGWIDFVL-LDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHK 451 (480)
Q Consensus 385 d~SFDlV~ss~vL~h~~d~~~-l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~ 451 (480)
+..||+++... |..-.+++. -..+|.+|.|++||||.+.- |... ..+...+...||...+
T Consensus 177 ~~~~d~~~~D~-f~p~~np~~w~~~~~~~l~~~~~~g~~~~t--~~~~----~~vr~~L~~aGf~v~~ 237 (676)
T 3ps9_A 177 NQKVDAWFLDG-FAPAKNPDMWTQNLFNAMARLARPGGTLAT--FTSA----GFVRRGLQDAGFTMQK 237 (676)
T ss_dssp TTCEEEEEECC-SCGGGCGGGSCHHHHHHHHHHEEEEEEEEE--SCCC----HHHHHHHHHHTCEEEE
T ss_pred CCcccEEEECC-CCCcCChhhhhHHHHHHHHHHhCCCCEEEe--ccCc----HHHHHHHHhCCeEEEe
Confidence 46799998632 322222211 14589999999999998654 2222 2344566777886443
No 342
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=79.86 E-value=0.93 Score=44.19 Aligned_cols=48 Identities=23% Similarity=0.249 Sum_probs=30.6
Q ss_pred HHHHHHHHhcccCCcEEEEee--cc-CC---h----hhH-HHHHHHHHHcCceee---EEEE
Q 046488 407 DFILYDWDRVLRPGGLLWIDS--FF-CA---K----EDM-NDYLEVFKMLKYKKH---KWVV 454 (480)
Q Consensus 407 ~~~L~EI~RVLKPGG~fiI~~--f~-~~---~----edL-~~~~~~l~~lGfkkl---~W~~ 454 (480)
..++.|+.|+|||||.+++.. .. .. . -.+ ..+..+++..||... -|..
T Consensus 77 ~~~~~~~~rvLk~~G~l~i~~~d~~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~~iiW~K 138 (297)
T 2zig_A 77 DRVWREVFRLLVPGGRLVIVVGDVAVARRRFGRHLVFPLHADIQVRCRKLGFDNLNPIIWHK 138 (297)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECCEEEECC----EEEECHHHHHHHHHHHTTCEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCcEEEEEECCCccccccCCcccccccHHHHHHHHHHcCCeeeccEEEeC
Confidence 457889999999999988752 11 00 0 011 345667888898643 3754
No 343
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=79.56 E-value=5.3 Score=39.53 Aligned_cols=94 Identities=16% Similarity=0.175 Sum_probs=53.5
Q ss_pred cCCCCCCCCeEEEECC--CCcHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeeccc-----CCC--CCCCcc
Q 046488 319 LDIKPGEIRIGLDFSI--GTGTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITINQ-----RVP--FFDNTL 388 (480)
Q Consensus 319 L~l~~g~iR~VLDVGC--GtG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae-----~LP--Fpd~SF 388 (480)
.++++++ +||-+|+ |.|..+..++. .|..++.++.+ +.....+++-+.....+..+ .+- ...+.+
T Consensus 166 ~~~~~g~--~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~ 240 (351)
T 1yb5_A 166 ACVKAGE--SVLVHGASGGVGLAACQIARAYGLKILGTAGT---EEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGI 240 (351)
T ss_dssp SCCCTTC--EEEEETCSSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCE
T ss_pred hCCCCcC--EEEEECCCChHHHHHHHHHHHCCCEEEEEeCC---hhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCc
Confidence 3455554 8999997 55666666654 58888877754 22222333323332222111 000 112358
Q ss_pred chheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 389 DLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 389 DlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
|+|+.+.. ...+.+..+.|+|||++++..
T Consensus 241 D~vi~~~G----------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 241 DIIIEMLA----------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EEEEESCH----------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEEEECCC----------hHHHHHHHHhccCCCEEEEEe
Confidence 87774322 125778899999999988753
No 344
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=79.06 E-value=3 Score=40.71 Aligned_cols=92 Identities=13% Similarity=0.024 Sum_probs=54.2
Q ss_pred CCCCCCCCeEEEECC--CCcHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeecc-cCC------CCCCCccc
Q 046488 320 DIKPGEIRIGLDFSI--GTGTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITIN-QRV------PFFDNTLD 389 (480)
Q Consensus 320 ~l~~g~iR~VLDVGC--GtG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~a-e~L------PFpd~SFD 389 (480)
.+++|+ +||-+|+ |.|..+..+++ .|..++.++.+ +.....+++-+....+... +.+ -...+.+|
T Consensus 145 ~~~~g~--~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D 219 (334)
T 3qwb_A 145 HVKKGD--YVLLFAAAGGVGLILNQLLKMKGAHTIAVAST---DEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVD 219 (334)
T ss_dssp CCCTTC--EEEESSTTBHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEE
T ss_pred cCCCCC--EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCce
Confidence 455554 8999994 45667776665 48888887754 2223344443333332211 100 01234688
Q ss_pred hheecccccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 390 LIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 390 lV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
+|+..-. . ..+....+.|||||.+++.
T Consensus 220 ~vid~~g-----~-----~~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 220 ASFDSVG-----K-----DTFEISLAALKRKGVFVSF 246 (334)
T ss_dssp EEEECCG-----G-----GGHHHHHHHEEEEEEEEEC
T ss_pred EEEECCC-----h-----HHHHHHHHHhccCCEEEEE
Confidence 8875332 1 1577888999999998875
No 345
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=78.89 E-value=1.9 Score=43.28 Aligned_cols=100 Identities=9% Similarity=-0.022 Sum_probs=57.6
Q ss_pred CCeEEEECCCCcHHHHHHhhC--CCEEEEEecCCChhH-HHHHHHhC-----------------------CCCeee----
Q 046488 326 IRIGLDFSIGTGTFAARMREF--NVTLVSAIINLGAPF-NEMIALRG-----------------------LVPLYI---- 375 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d~~~~~-~~~iA~rg-----------------------lip~~~---- 375 (480)
.+.|+.+|||..+.+.+|... ++.++.+|.-..-.. ...+...+ ....+-
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL~ 177 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDLN 177 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCTT
T ss_pred CcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCCC
Confidence 568999999999999999873 666766663110001 11111110 000111
Q ss_pred --ec----ccCCCCCCCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeec
Q 046488 376 --TI----NQRVPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 376 --~~----ae~LPFpd~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
++ ....+ ..+...++++-.++..+... ....++..+.+.+ |||.+++.+.
T Consensus 178 d~~w~~~ll~~~~-d~~~Ptl~iaEgvL~YL~~~-~~~~ll~~ia~~~-~~~~~v~~e~ 233 (334)
T 1rjd_A 178 DITETTRLLDVCT-KREIPTIVISECLLCYMHNN-ESQLLINTIMSKF-SHGLWISYDP 233 (334)
T ss_dssp CHHHHHHHHHTTC-CTTSCEEEEEESCGGGSCHH-HHHHHHHHHHHHC-SSEEEEEEEE
T ss_pred CcHHHHHHHHhcC-CCCCCEEEEEcchhhCCCHH-HHHHHHHHHHhhC-CCcEEEEEec
Confidence 11 12334 34566777877777666543 3467778787776 7888765443
No 346
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=78.77 E-value=3.4 Score=42.04 Aligned_cols=106 Identities=16% Similarity=0.102 Sum_probs=63.7
Q ss_pred CCchhhhhHHHhcCCCCCCCCeEEEECCCCcHHHHHHhhC-CCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCCC
Q 046488 307 TNLTADFLIPEVLDIKPGEIRIGLDFSIGTGTFAARMREF-NVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFD 385 (480)
Q Consensus 307 ~~~~ad~~I~~vL~l~~g~iR~VLDVGCGtG~fAa~Lae~-gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFpd 385 (480)
++.-++.|+-+.+.... .+||+++-+.|.++..+... .++++ . ++.+.....++.|.-. .. ...+..++
T Consensus 30 ~~~~~~~~l~~~~~~~~---~~~l~~n~~~g~~~~~~~~~~~~~~~--~--~~~~~~~~l~~~~~~~-~~--~~~~~~~~ 99 (381)
T 3dmg_A 30 YRDPVHDLLQKTVEPFG---ERALDLNPGVGWGSLPLEGRMAVERL--E--TSRAAFRCLTASGLQA-RL--ALPWEAAA 99 (381)
T ss_dssp SSCHHHHHHHTTCCCCS---SEEEESSCTTSTTTGGGBTTBEEEEE--E--CBHHHHHHHHHTTCCC-EE--CCGGGSCT
T ss_pred CCChHHHHHHHHHHHhC---CcEEEecCCCCccccccCCCCceEEE--e--CcHHHHHHHHHcCCCc-cc--cCCccCCc
Confidence 44455656655444322 47999999999888777633 33333 2 2334444444444422 11 11222356
Q ss_pred CccchheecccccCccCh---hcHHHHHHHHHhcccCCcEEEEee
Q 046488 386 NTLDLIHTTRFLDGWIDF---VLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 386 ~SFDlV~ss~vL~h~~d~---~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
..||+|+. .|+.. ..++..|.++.+.|+|||.+++.+
T Consensus 100 ~~~d~v~~-----~~Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~g 139 (381)
T 3dmg_A 100 GAYDLVVL-----ALPAGRGTAYVQASLVAAARALRMGGRLYLAG 139 (381)
T ss_dssp TCEEEEEE-----ECCGGGCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCEEEE-----ECCcchhHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 78998773 34421 234678999999999999998864
No 347
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=78.70 E-value=4.8 Score=39.12 Aligned_cols=94 Identities=19% Similarity=0.111 Sum_probs=54.6
Q ss_pred cCCCCCCCCeEEEEC--CCCcHHHHHHhhC-CCEEEEEecCCChhHHHHHHHhCCCCeeeecc-c----CC--CCCCCcc
Q 046488 319 LDIKPGEIRIGLDFS--IGTGTFAARMREF-NVTLVSAIINLGAPFNEMIALRGLVPLYITIN-Q----RV--PFFDNTL 388 (480)
Q Consensus 319 L~l~~g~iR~VLDVG--CGtG~fAa~Lae~-gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~a-e----~L--PFpd~SF 388 (480)
.++++|+ +||-+| .|.|..+..+++. |..++.++.+ +.....+++-+....+... + .+ -...+.+
T Consensus 136 ~~~~~g~--~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~ 210 (325)
T 3jyn_A 136 YQVKPGE--IILFHAAAGGVGSLACQWAKALGAKLIGTVSS---PEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKC 210 (325)
T ss_dssp SCCCTTC--EEEESSTTSHHHHHHHHHHHHHTCEEEEEESS---HHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCE
T ss_pred cCCCCCC--EEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCc
Confidence 3455564 899998 3567777777664 8888887754 2222233332222222211 0 00 0123468
Q ss_pred chheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 389 DLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 389 DlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
|+|+..-. . . .+.+..+.|+|||++++..
T Consensus 211 Dvvid~~g-----~-~----~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 211 PVVYDGVG-----Q-D----TWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp EEEEESSC-----G-G----GHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCC-----h-H----HHHHHHHHhcCCCEEEEEe
Confidence 88875322 1 1 5778899999999998864
No 348
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=77.50 E-value=3.9 Score=40.12 Aligned_cols=93 Identities=13% Similarity=0.090 Sum_probs=53.9
Q ss_pred CCCCCCCCeEEEECC--CCcHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeeccc-----CCC--CCCCccc
Q 046488 320 DIKPGEIRIGLDFSI--GTGTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITINQ-----RVP--FFDNTLD 389 (480)
Q Consensus 320 ~l~~g~iR~VLDVGC--GtG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae-----~LP--Fpd~SFD 389 (480)
+++++ .+||-+|+ |.|..+..++. .|..++.++.+. ...+.+..-| ....++... .+- ...+.+|
T Consensus 163 ~~~~g--~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~--~~~~~~~~~g-a~~~~d~~~~~~~~~~~~~~~~~~~d 237 (343)
T 2eih_A 163 GVRPG--DDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSE--DKLRRAKALG-ADETVNYTHPDWPKEVRRLTGGKGAD 237 (343)
T ss_dssp CCCTT--CEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSH--HHHHHHHHHT-CSEEEETTSTTHHHHHHHHTTTTCEE
T ss_pred CCCCC--CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHhcC-CCEEEcCCcccHHHHHHHHhCCCCce
Confidence 44555 48999998 67777777765 588888777542 2222222223 222222111 000 1124688
Q ss_pred hheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 390 LIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 390 lV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
+|+.... .. .+.+..+.|+|||++++..
T Consensus 238 ~vi~~~g------~~----~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 238 KVVDHTG------AL----YFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp EEEESSC------SS----SHHHHHHHEEEEEEEEESS
T ss_pred EEEECCC------HH----HHHHHHHhhccCCEEEEEe
Confidence 8875432 11 4778889999999988753
No 349
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=77.46 E-value=3.2 Score=40.76 Aligned_cols=92 Identities=11% Similarity=0.098 Sum_probs=54.1
Q ss_pred CCCCCCCCeEEEECCCC-cHHHHHHhh-C--CCEEEEEecCCChhHHHHHHHhCCCCeeeec------ccCCCCCCCccc
Q 046488 320 DIKPGEIRIGLDFSIGT-GTFAARMRE-F--NVTLVSAIINLGAPFNEMIALRGLVPLYITI------NQRVPFFDNTLD 389 (480)
Q Consensus 320 ~l~~g~iR~VLDVGCGt-G~fAa~Lae-~--gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~------ae~LPFpd~SFD 389 (480)
++ +|+ +||-+|+|. |.++..+++ . |..++.++.+ +.....+++-+....+.. .+.+. ..+.||
T Consensus 168 ~~-~g~--~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~---~~~~~~~~~lGa~~vi~~~~~~~~~~~~~-~g~g~D 240 (344)
T 2h6e_A 168 KF-AEP--VVIVNGIGGLAVYTIQILKALMKNITIVGISRS---KKHRDFALELGADYVSEMKDAESLINKLT-DGLGAS 240 (344)
T ss_dssp TC-SSC--EEEEECCSHHHHHHHHHHHHHCTTCEEEEECSC---HHHHHHHHHHTCSEEECHHHHHHHHHHHH-TTCCEE
T ss_pred CC-CCC--EEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCC---HHHHHHHHHhCCCEEeccccchHHHHHhh-cCCCcc
Confidence 55 554 899999864 667777765 5 8888777643 222233333222222221 11111 123688
Q ss_pred hheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 390 LIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 390 lV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
+|+-.-. . ...+.+..++|||||.+++..
T Consensus 241 ~vid~~g-----~----~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 241 IAIDLVG-----T----EETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp EEEESSC-----C----HHHHHHHHHHEEEEEEEEECC
T ss_pred EEEECCC-----C----hHHHHHHHHHhhcCCEEEEeC
Confidence 8874322 1 236889999999999988753
No 350
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=77.20 E-value=4.6 Score=39.87 Aligned_cols=91 Identities=12% Similarity=-0.026 Sum_probs=52.6
Q ss_pred CeEEEECCCC-cHHH-HHHh-hC-CCE-EEEEecCCChhHHHHHHHhCCCCeeeecccCCCCC-----CCccchheeccc
Q 046488 327 RIGLDFSIGT-GTFA-ARMR-EF-NVT-LVSAIINLGAPFNEMIALRGLVPLYITINQRVPFF-----DNTLDLIHTTRF 396 (480)
Q Consensus 327 R~VLDVGCGt-G~fA-a~La-e~-gV~-Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFp-----d~SFDlV~ss~v 396 (480)
.+||-+|+|. |.++ ..++ +. |.. ++.++.+...+.....+++-+.... ... .-.+. .+.||+|+-.-.
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~~-~~~~~~i~~~~gg~Dvvid~~g 251 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-DSR-QTPVEDVPDVYEQMDFIYEATG 251 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-ETT-TSCGGGHHHHSCCEEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-CCC-ccCHHHHHHhCCCCCEEEECCC
Confidence 3899999753 6777 7777 54 876 8887765320012233444333222 211 10110 236888773221
Q ss_pred ccCccChhcHHHHHHHHHhcccCCcEEEEeec
Q 046488 397 LDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 397 L~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
. ...+.+..++|||||.++....
T Consensus 252 -----~----~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 252 -----F----PKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp -----C----HHHHHHHHHHEEEEEEEEECCC
T ss_pred -----C----hHHHHHHHHHHhcCCEEEEEeC
Confidence 1 2368899999999999887643
No 351
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=77.15 E-value=8.6 Score=37.83 Aligned_cols=98 Identities=11% Similarity=0.010 Sum_probs=55.6
Q ss_pred HhcCCCCCCCCeEEEECCCC-cHHHHHHhhC-CCE-EEEEecCCChhHHHHHHHhCCCCee-ee--------cccCC--C
Q 046488 317 EVLDIKPGEIRIGLDFSIGT-GTFAARMREF-NVT-LVSAIINLGAPFNEMIALRGLVPLY-IT--------INQRV--P 382 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGCGt-G~fAa~Lae~-gV~-Vv~vd~d~~~~~~~~iA~rglip~~-~~--------~ae~L--P 382 (480)
+..++.+|+ +||=+|+|. |.++..+++. |.. ++.++.+ +.....+++-....+ .. ..+.+ -
T Consensus 173 ~~~~~~~g~--~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~---~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~ 247 (363)
T 3m6i_A 173 QRAGVRLGD--PVLICGAGPIGLITMLCAKAAGACPLVITDID---EGRLKFAKEICPEVVTHKVERLSAEESAKKIVES 247 (363)
T ss_dssp HHHTCCTTC--CEEEECCSHHHHHHHHHHHHTTCCSEEEEESC---HHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHH
T ss_pred HHcCCCCCC--EEEEECCCHHHHHHHHHHHHcCCCEEEEECCC---HHHHHHHHHhchhcccccccccchHHHHHHHHHH
Confidence 344566765 688889865 7777777764 876 7766644 222233332211111 00 01110 0
Q ss_pred CCCCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeec
Q 046488 383 FFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 383 Fpd~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
.....+|+|+-.-. . ...+.+..+.|+|||++++...
T Consensus 248 t~g~g~Dvvid~~g-----~----~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 248 FGGIEPAVALECTG-----V----ESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp TSSCCCSEEEECSC-----C----HHHHHHHHHHSCTTCEEEECCC
T ss_pred hCCCCCCEEEECCC-----C----hHHHHHHHHHhcCCCEEEEEcc
Confidence 12456888874321 2 2368899999999999988643
No 352
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=76.71 E-value=5.5 Score=39.10 Aligned_cols=96 Identities=15% Similarity=0.188 Sum_probs=54.3
Q ss_pred cCCCCCCCCeEEEECCC--CcHHHHHHhh-C-CCEEEEEecCCChhHHHHHHHhCCCCeeeeccc-C----C-CCCC-Cc
Q 046488 319 LDIKPGEIRIGLDFSIG--TGTFAARMRE-F-NVTLVSAIINLGAPFNEMIALRGLVPLYITINQ-R----V-PFFD-NT 387 (480)
Q Consensus 319 L~l~~g~iR~VLDVGCG--tG~fAa~Lae-~-gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae-~----L-PFpd-~S 387 (480)
.++++++ +||-+|+| .|..+..++. . |..++.++.+. ...+.+..-| ......... . + .... +.
T Consensus 166 ~~~~~g~--~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~--~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 240 (347)
T 1jvb_A 166 ASLDPTK--TLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVRE--EAVEAAKRAG-ADYVINASMQDPLAEIRRITESKG 240 (347)
T ss_dssp TTCCTTC--EEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSH--HHHHHHHHHT-CSEEEETTTSCHHHHHHHHTTTSC
T ss_pred cCCCCCC--EEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCH--HHHHHHHHhC-CCEEecCCCccHHHHHHHHhcCCC
Confidence 3455554 89999998 5556555554 5 88888777542 2222222223 222222111 0 0 0111 46
Q ss_pred cchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeec
Q 046488 388 LDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 388 FDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
+|+|+.... . ...+.+..+.|+|||.+++...
T Consensus 241 ~d~vi~~~g-----~----~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 241 VDAVIDLNN-----S----EKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp EEEEEESCC-----C----HHHHTTGGGGEEEEEEEEECCS
T ss_pred ceEEEECCC-----C----HHHHHHHHHHHhcCCEEEEECC
Confidence 888874322 1 2368889999999999887643
No 353
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=76.65 E-value=2.1 Score=43.54 Aligned_cols=30 Identities=17% Similarity=-0.048 Sum_probs=25.5
Q ss_pred CeEEEECCCCcHHHHHHhhC--CCEEEEEecC
Q 046488 327 RIGLDFSIGTGTFAARMREF--NVTLVSAIIN 356 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~--gV~Vv~vd~d 356 (480)
.+|||||.|.|.++..|.++ +..++.+.+|
T Consensus 60 ~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D 91 (353)
T 1i4w_A 60 LKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKR 91 (353)
T ss_dssp CEEEEESCTTCHHHHHHHHHHCCSEEEEECCC
T ss_pred CEEEEECCCCCHHHHHHHhhCCCCEEEEEecC
Confidence 58999999999999999975 4577777766
No 354
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=76.25 E-value=3.6 Score=40.44 Aligned_cols=93 Identities=15% Similarity=0.145 Sum_probs=53.8
Q ss_pred cCCCCCCCCeEEEECC--CCcHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCC------CCCCCccc
Q 046488 319 LDIKPGEIRIGLDFSI--GTGTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRV------PFFDNTLD 389 (480)
Q Consensus 319 L~l~~g~iR~VLDVGC--GtG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~L------PFpd~SFD 389 (480)
..+++|+ +||=+|+ |.|..+..+++ .|..++.++.+. ...+ .+++-+........+.+ -.....+|
T Consensus 155 ~~~~~g~--~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~--~~~~-~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~D 229 (342)
T 4eye_A 155 GQLRAGE--TVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRT--AATE-FVKSVGADIVLPLEEGWAKAVREATGGAGVD 229 (342)
T ss_dssp SCCCTTC--EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSG--GGHH-HHHHHTCSEEEESSTTHHHHHHHHTTTSCEE
T ss_pred cCCCCCC--EEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH--HHHH-HHHhcCCcEEecCchhHHHHHHHHhCCCCce
Confidence 3455564 8999997 56777777766 488888877542 2222 23332222222111110 01233688
Q ss_pred hheecccccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 390 LIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 390 lV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
+|+-.-. . ..+.+..+.|+|||.+++.
T Consensus 230 vvid~~g-----~-----~~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 230 MVVDPIG-----G-----PAFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp EEEESCC------------CHHHHHHTEEEEEEEEEC
T ss_pred EEEECCc-----h-----hHHHHHHHhhcCCCEEEEE
Confidence 8875322 1 1477888999999999875
No 355
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=75.83 E-value=8.5 Score=38.15 Aligned_cols=96 Identities=14% Similarity=0.072 Sum_probs=56.6
Q ss_pred hcCCCCCCCCeEEEEC--CCCcHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeecc-----cCCC-CCCCcc
Q 046488 318 VLDIKPGEIRIGLDFS--IGTGTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITIN-----QRVP-FFDNTL 388 (480)
Q Consensus 318 vL~l~~g~iR~VLDVG--CGtG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~a-----e~LP-Fpd~SF 388 (480)
...+++++ +||-+| .|.|..+..++. .|..++.++.+ +.....+++-+........ +.+. ...+.+
T Consensus 158 ~~~~~~g~--~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~---~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~ 232 (362)
T 2c0c_A 158 LGGLSEGK--KVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSS---DEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGV 232 (362)
T ss_dssp HTCCCTTC--EEEETTTTBTTHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCE
T ss_pred hcCCCCCC--EEEEeCCCcHHHHHHHHHHHhCCCEEEEEECC---HHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCC
Confidence 34566664 899999 467888877776 48888877754 2222333333333222210 0000 012458
Q ss_pred chheecccccCccChhcHHHHHHHHHhcccCCcEEEEeec
Q 046488 389 DLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 389 DlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
|+|+-... . ..+.++.+.|+|||.+++...
T Consensus 233 D~vid~~g-----~-----~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 233 DVVYESVG-----G-----AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp EEEEECSC-----T-----HHHHHHHHHEEEEEEEEECCC
T ss_pred CEEEECCC-----H-----HHHHHHHHHHhcCCEEEEEeC
Confidence 88874322 1 268889999999999887643
No 356
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=74.85 E-value=4.1 Score=40.77 Aligned_cols=96 Identities=16% Similarity=0.134 Sum_probs=55.8
Q ss_pred cC-CCCCCCCeEEEECCC-CcHHHHHHhh-CC-CEEEEEecCCChhHHHHHHHhCCCCeeeecc--------cCC-C-CC
Q 046488 319 LD-IKPGEIRIGLDFSIG-TGTFAARMRE-FN-VTLVSAIINLGAPFNEMIALRGLVPLYITIN--------QRV-P-FF 384 (480)
Q Consensus 319 L~-l~~g~iR~VLDVGCG-tG~fAa~Lae-~g-V~Vv~vd~d~~~~~~~~iA~rglip~~~~~a--------e~L-P-Fp 384 (480)
.+ +++|+ +||-+|+| .|.++..+++ .| ..++.++.+ +.....+++-+....+... +.+ . ..
T Consensus 190 ~~~~~~g~--~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~---~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~ 264 (380)
T 1vj0_A 190 YPESFAGK--TVVIQGAGPLGLFGVVIARSLGAENVIVIAGS---PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITH 264 (380)
T ss_dssp CSSCCBTC--EEEEECCSHHHHHHHHHHHHTTBSEEEEEESC---HHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTT
T ss_pred cCCCCCCC--EEEEECcCHHHHHHHHHHHHcCCceEEEEcCC---HHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhC
Confidence 45 55664 89999966 3667777776 48 488887754 2233334443333222211 111 0 12
Q ss_pred CCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeec
Q 046488 385 DNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 385 d~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
...+|+|+-.-. .. ..+.+..+.|||||++++...
T Consensus 265 g~g~Dvvid~~g-----~~----~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 265 GRGADFILEATG-----DS----RALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp TSCEEEEEECSS-----CT----THHHHHHHHEEEEEEEEECCC
T ss_pred CCCCcEEEECCC-----CH----HHHHHHHHHHhcCCEEEEEec
Confidence 236888874321 11 268889999999999887654
No 357
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=74.43 E-value=20 Score=35.27 Aligned_cols=97 Identities=11% Similarity=-0.043 Sum_probs=53.1
Q ss_pred cCCCCCCCCeEEEECC--CCcHHHHHHhhC-CCEEEEEecCC-ChhHHHHHHHhCCCCeeeec-------ccCCCCCCCc
Q 046488 319 LDIKPGEIRIGLDFSI--GTGTFAARMREF-NVTLVSAIINL-GAPFNEMIALRGLVPLYITI-------NQRVPFFDNT 387 (480)
Q Consensus 319 L~l~~g~iR~VLDVGC--GtG~fAa~Lae~-gV~Vv~vd~d~-~~~~~~~iA~rglip~~~~~-------ae~LPFpd~S 387 (480)
.++++|+ +||=+|+ |.|.++..+++. |..++.+.-.. ..+.....+++-+....+.. ..++--..+.
T Consensus 163 ~~~~~g~--~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~ 240 (357)
T 1zsy_A 163 EQLQPGD--SVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQ 240 (357)
T ss_dssp SCCCTTC--EEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCC
T ss_pred hccCCCC--EEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCC
Confidence 3566665 8999996 568888888874 88776655221 11112233444333332221 1111101113
Q ss_pred cchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 388 LDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 388 FDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
+|+|+-.- ... .+.+..+.|||||++++..
T Consensus 241 ~Dvvid~~-----g~~-----~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 241 PRLALNCV-----GGK-----SSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp CSEEEESS-----CHH-----HHHHHHTTSCTTCEEEECC
T ss_pred ceEEEECC-----CcH-----HHHHHHHhhCCCCEEEEEe
Confidence 78776321 111 3456889999999988753
No 358
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=73.52 E-value=4.7 Score=38.69 Aligned_cols=87 Identities=20% Similarity=0.096 Sum_probs=52.4
Q ss_pred CCCCCCCeEEEECC--CCcHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeec------ccCCCCCCCccchh
Q 046488 321 IKPGEIRIGLDFSI--GTGTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITI------NQRVPFFDNTLDLI 391 (480)
Q Consensus 321 l~~g~iR~VLDVGC--GtG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~------ae~LPFpd~SFDlV 391 (480)
+++|+ +||-+|+ |.|..+..+++ .|..++.++.+. ...+ .+++-+....... .+.+ +.+|+|
T Consensus 123 ~~~g~--~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~--~~~~-~~~~~ga~~~~~~~~~~~~~~~~----~~~d~v 193 (302)
T 1iz0_A 123 ARPGE--KVLVQAAAGALGTAAVQVARAMGLRVLAAASRP--EKLA-LPLALGAEEAATYAEVPERAKAW----GGLDLV 193 (302)
T ss_dssp CCTTC--EEEESSTTBHHHHHHHHHHHHTTCEEEEEESSG--GGSH-HHHHTTCSEEEEGGGHHHHHHHT----TSEEEE
T ss_pred CCCCC--EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--HHHH-HHHhcCCCEEEECCcchhHHHHh----cCceEE
Confidence 55564 8999997 56777777765 588888877542 2222 2233222222221 1122 568888
Q ss_pred eecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 392 HTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 392 ~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
+. .. . . .+.+..+.|+|||+++...
T Consensus 194 id-~g-----~-~----~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 194 LE-VR-----G-K----EVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp EE-CS-----C-T----THHHHHTTEEEEEEEEEC-
T ss_pred EE-CC-----H-H----HHHHHHHhhccCCEEEEEe
Confidence 75 22 1 1 4788899999999988753
No 359
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=73.19 E-value=7 Score=38.33 Aligned_cols=93 Identities=15% Similarity=0.071 Sum_probs=52.8
Q ss_pred CCCCCCCCeEEEECCCC-cHHHHHHhh-CCC-EEEEEecCCChhHHHHHHHhCCCCeeeecc-c----CCC--CCCCccc
Q 046488 320 DIKPGEIRIGLDFSIGT-GTFAARMRE-FNV-TLVSAIINLGAPFNEMIALRGLVPLYITIN-Q----RVP--FFDNTLD 389 (480)
Q Consensus 320 ~l~~g~iR~VLDVGCGt-G~fAa~Lae-~gV-~Vv~vd~d~~~~~~~~iA~rglip~~~~~a-e----~LP--Fpd~SFD 389 (480)
++ +|+ +||-+|+|. |..+..+++ .|. .++.++.+ +.....+++-+....+... + .+- .....+|
T Consensus 165 ~~-~g~--~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~---~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D 238 (348)
T 2d8a_A 165 PI-SGK--SVLITGAGPLGLLGIAVAKASGAYPVIVSEPS---DFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVD 238 (348)
T ss_dssp CC-TTC--CEEEECCSHHHHHHHHHHHHTTCCSEEEECSC---HHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEE
T ss_pred CC-CCC--EEEEECCCHHHHHHHHHHHHcCCCEEEEECCC---HHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCC
Confidence 45 554 799999863 666776665 487 78777654 2222233332222222211 0 000 1123588
Q ss_pred hheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 390 LIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 390 lV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
+|+-.-. . ...+.+..+.|+|||+++...
T Consensus 239 ~vid~~g-----~----~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 239 VFLEFSG-----A----PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp EEEECSC-----C----HHHHHHHHHHEEEEEEEEECC
T ss_pred EEEECCC-----C----HHHHHHHHHHHhcCCEEEEEc
Confidence 8874322 1 236889999999999988753
No 360
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=73.14 E-value=11 Score=36.64 Aligned_cols=58 Identities=12% Similarity=0.004 Sum_probs=39.0
Q ss_pred CCCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeeccC--ChhhHHHHHHHHHHcC
Q 046488 384 FDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFC--AKEDMNDYLEVFKMLK 446 (480)
Q Consensus 384 pd~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~~--~~edL~~~~~~l~~lG 446 (480)
+..+||+||.-.-. -... ..++..+...|+|||+++++++.. -....+.+.++++..+
T Consensus 179 ~~~~~dlv~ID~D~---Y~~t--~~~le~~~p~l~~GGvIv~DD~~~~~w~G~~~A~~ef~~~~~ 238 (257)
T 3tos_A 179 PQTVIALAYFDLDL---YEPT--KAVLEAIRPYLTKGSIVAFDELDNPKWPGENIAMRKVLGLDH 238 (257)
T ss_dssp TTCCEEEEEECCCC---HHHH--HHHHHHHGGGEEEEEEEEESSTTCTTCTHHHHHHHHHTCTTS
T ss_pred CCCceEEEEEcCcc---cchH--HHHHHHHHHHhCCCcEEEEcCCCCCCChHHHHHHHHHHhhCC
Confidence 46689999975432 1121 347888999999999999998742 1234455667766644
No 361
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=72.47 E-value=7.1 Score=40.08 Aligned_cols=93 Identities=15% Similarity=0.096 Sum_probs=54.1
Q ss_pred CCCCCCCCeEEEECC--CCcHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeec-ccCCC-------------
Q 046488 320 DIKPGEIRIGLDFSI--GTGTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITI-NQRVP------------- 382 (480)
Q Consensus 320 ~l~~g~iR~VLDVGC--GtG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~-ae~LP------------- 382 (480)
.+++|+ +||=+|+ |.|.++..+++ .|..++.++.+ +.....+++-+....+.. .+.+.
T Consensus 225 ~~~~g~--~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~---~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~ 299 (456)
T 3krt_A 225 GMKQGD--NVLIWGASGGLGSYATQFALAGGANPICVVSS---PQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEW 299 (456)
T ss_dssp CCCTTC--EEEETTTTSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHH
T ss_pred CCCCCC--EEEEECCCCHHHHHHHHHHHHcCCeEEEEECC---HHHHHHHHhhCCcEEEecCcCcccccccccccchHHH
Confidence 455564 8999997 45777777776 48888777633 222333333223322221 11111
Q ss_pred ----------CCCCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 383 ----------FFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 383 ----------Fpd~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
.....+|+|+-.-. ...+.+..++|||||.+++..
T Consensus 300 ~~~~~~i~~~t~g~g~Dvvid~~G----------~~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 300 KRFGKRIRELTGGEDIDIVFEHPG----------RETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHHHHTSCCEEEEEECSC----------HHHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHHHHhCCCCCcEEEEcCC----------chhHHHHHHHhhCCcEEEEEe
Confidence 11246787764221 136888899999999998753
No 362
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=72.13 E-value=7.2 Score=37.73 Aligned_cols=94 Identities=15% Similarity=0.059 Sum_probs=52.9
Q ss_pred cCCCCCCCCeEEEEC--CCCcHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeecc-----cCCC--CCCCcc
Q 046488 319 LDIKPGEIRIGLDFS--IGTGTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITIN-----QRVP--FFDNTL 388 (480)
Q Consensus 319 L~l~~g~iR~VLDVG--CGtG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~a-----e~LP--Fpd~SF 388 (480)
.+++++ ++||-+| .|.|..+..++. .|..++.++.+. ........-| ........ +.+- ...+.+
T Consensus 136 ~~~~~g--~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~--~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (327)
T 1qor_A 136 YEIKPD--EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTA--QKAQSALKAG-AWQVINYREEDLVERLKEITGGKKV 210 (327)
T ss_dssp SCCCTT--CEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSH--HHHHHHHHHT-CSEEEETTTSCHHHHHHHHTTTCCE
T ss_pred hCCCCC--CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHcC-CCEEEECCCccHHHHHHHHhCCCCc
Confidence 345555 4899999 456666666655 588888776542 2222222223 22222210 0000 112358
Q ss_pred chheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 389 DLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 389 DlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
|+|+.+.. . ..+.+..+.|+|||++++..
T Consensus 211 D~vi~~~g------~----~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 211 RVVYDSVG------R----DTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp EEEEECSC------G----GGHHHHHHTEEEEEEEEECC
T ss_pred eEEEECCc------h----HHHHHHHHHhcCCCEEEEEe
Confidence 88875432 1 25788899999999988754
No 363
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=70.75 E-value=13 Score=37.73 Aligned_cols=93 Identities=17% Similarity=0.099 Sum_probs=53.1
Q ss_pred CCCCCCCCeEEEECC--CCcHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeec-ccCCCC------------
Q 046488 320 DIKPGEIRIGLDFSI--GTGTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITI-NQRVPF------------ 383 (480)
Q Consensus 320 ~l~~g~iR~VLDVGC--GtG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~-ae~LPF------------ 383 (480)
.+++|+ +||=+|+ |.|..+..+++ .|..++.++.+ +.....+++-+....+.. ...+..
T Consensus 217 ~~~~g~--~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~---~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~ 291 (447)
T 4a0s_A 217 QMKQGD--IVLIWGASGGLGSYAIQFVKNGGGIPVAVVSS---AQKEAAVRALGCDLVINRAELGITDDIADDPRRVVET 291 (447)
T ss_dssp CCCTTC--EEEETTTTSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHH
T ss_pred CCCCCC--EEEEECCCCHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHhcCCCEEEecccccccccccccccccchh
Confidence 455554 8999997 45677777766 48888777643 222333344333322221 111100
Q ss_pred -----------CCCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 384 -----------FDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 384 -----------pd~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
..+.+|+|+-.-. ...+.+..+.|+|||.+++..
T Consensus 292 ~~~~~~~v~~~~g~g~Dvvid~~G----------~~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 292 GRKLAKLVVEKAGREPDIVFEHTG----------RVTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHSSCCSEEEECSC----------HHHHHHHHHHSCTTCEEEESC
T ss_pred hhHHHHHHHHHhCCCceEEEECCC----------chHHHHHHHHHhcCCEEEEEe
Confidence 0245787774322 125788889999999988753
No 364
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=69.81 E-value=5.1 Score=38.82 Aligned_cols=94 Identities=14% Similarity=0.028 Sum_probs=52.9
Q ss_pred CCCCCCCCeEEEECC--CCcHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeecc----cC-CCCCCCccchh
Q 046488 320 DIKPGEIRIGLDFSI--GTGTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITIN----QR-VPFFDNTLDLI 391 (480)
Q Consensus 320 ~l~~g~iR~VLDVGC--GtG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~a----e~-LPFpd~SFDlV 391 (480)
++.+++ .+||-+|+ |.|.++..+++ .|..++.++.+. ...+ .+++-+....+... +. .....+.+|+|
T Consensus 145 ~~~~g~-~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~--~~~~-~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~v 220 (328)
T 1xa0_A 145 GLTPER-GPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKA--AEHD-YLRVLGAKEVLAREDVMAERIRPLDKQRWAAA 220 (328)
T ss_dssp TCCGGG-CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCT--TCHH-HHHHTTCSEEEECC---------CCSCCEEEE
T ss_pred CCCCCC-ceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCH--HHHH-HHHHcCCcEEEecCCcHHHHHHHhcCCcccEE
Confidence 355542 15999997 56778877776 488888777542 2222 22332232222211 00 11123468887
Q ss_pred eecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 392 HTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 392 ~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
+-.-. .. .+.+..+.|+|||++++..
T Consensus 221 id~~g-----~~-----~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 221 VDPVG-----GR-----TLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp EECST-----TT-----THHHHHHTEEEEEEEEECS
T ss_pred EECCc-----HH-----HHHHHHHhhccCCEEEEEe
Confidence 74321 11 4778889999999988764
No 365
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=69.48 E-value=8.1 Score=37.91 Aligned_cols=88 Identities=13% Similarity=0.132 Sum_probs=50.7
Q ss_pred CCCCCeEEEEC-CC-CcHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeecc-------cCCCCCCCccchhe
Q 046488 323 PGEIRIGLDFS-IG-TGTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITIN-------QRVPFFDNTLDLIH 392 (480)
Q Consensus 323 ~g~iR~VLDVG-CG-tG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~a-------e~LPFpd~SFDlV~ 392 (480)
+|+ +||=+| +| .|.++..+++ .|..++.++.+ +.....+++-+....+... ..+ ..+.||+|+
T Consensus 150 ~g~--~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~---~~~~~~~~~lGa~~vi~~~~~~~~~~~~~--~~~g~Dvv~ 222 (346)
T 3fbg_A 150 EGK--TLLIINGAGGVGSIATQIAKAYGLRVITTASR---NETIEWTKKMGADIVLNHKESLLNQFKTQ--GIELVDYVF 222 (346)
T ss_dssp TTC--EEEEESTTSHHHHHHHHHHHHTTCEEEEECCS---HHHHHHHHHHTCSEEECTTSCHHHHHHHH--TCCCEEEEE
T ss_pred CCC--EEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHhcCCcEEEECCccHHHHHHHh--CCCCccEEE
Confidence 454 788884 43 4677777766 48888887653 2223333332222222211 111 234688877
Q ss_pred ecccccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 393 TTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 393 ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
-... . ...+.+..+.|||||.++..
T Consensus 223 d~~g------~---~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 223 CTFN------T---DMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp ESSC------H---HHHHHHHHHHEEEEEEEEES
T ss_pred ECCC------c---hHHHHHHHHHhccCCEEEEE
Confidence 4221 1 23678999999999998653
No 366
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=68.55 E-value=26 Score=33.93 Aligned_cols=93 Identities=14% Similarity=0.106 Sum_probs=52.7
Q ss_pred CCCCCCCCeEEEECCCCc-HHHHHHhh-C-CCEEEEEecCCChhHHHHHHHhCCCCeeeecc-----cCCC--CCCCccc
Q 046488 320 DIKPGEIRIGLDFSIGTG-TFAARMRE-F-NVTLVSAIINLGAPFNEMIALRGLVPLYITIN-----QRVP--FFDNTLD 389 (480)
Q Consensus 320 ~l~~g~iR~VLDVGCGtG-~fAa~Lae-~-gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~a-----e~LP--Fpd~SFD 389 (480)
.+++|+ +||=+|+|.+ .+++.++. . +..++.++.+ +.....+++.+....+... +.+- ....-+|
T Consensus 160 ~~~~g~--~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~---~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d 234 (348)
T 4eez_A 160 GVKPGD--WQVIFGAGGLGNLAIQYAKNVFGAKVIAVDIN---QDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQ 234 (348)
T ss_dssp TCCTTC--EEEEECCSHHHHHHHHHHHHTSCCEEEEEESC---HHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEE
T ss_pred CCCCCC--EEEEEcCCCccHHHHHHHHHhCCCEEEEEECc---HHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCce
Confidence 456665 7888999864 45555554 3 7788888754 3333445554444333211 1100 1222344
Q ss_pred hheecccccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 390 LIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 390 lV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
.++... .. ...+....+.|||||.+++.
T Consensus 235 ~~~~~~-----~~----~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 235 SAIVCA-----VA----RIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp EEEECC-----SC----HHHHHHHHHTEEEEEEEEEC
T ss_pred EEEEec-----cC----cchhheeheeecCCceEEEE
Confidence 444211 11 34789999999999998875
No 367
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=68.53 E-value=4.7 Score=39.84 Aligned_cols=92 Identities=17% Similarity=0.023 Sum_probs=53.0
Q ss_pred cCCCCCCCCeEEEEC--CCCcHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeec--------ccCCCCCCCc
Q 046488 319 LDIKPGEIRIGLDFS--IGTGTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITI--------NQRVPFFDNT 387 (480)
Q Consensus 319 L~l~~g~iR~VLDVG--CGtG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~--------ae~LPFpd~S 387 (480)
..+++++ +||-+| .|.|..+..+++ .|..++.++.+ +.....+++-+....+.. ...+. .+.
T Consensus 163 ~~~~~g~--~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~---~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~--~~g 235 (353)
T 4dup_A 163 AGLTEGE--SVLIHGGTSGIGTTAIQLARAFGAEVYATAGS---TGKCEACERLGAKRGINYRSEDFAAVIKAET--GQG 235 (353)
T ss_dssp TCCCTTC--EEEESSTTSHHHHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHTCSEEEETTTSCHHHHHHHHH--SSC
T ss_pred cCCCCCC--EEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCC---HHHHHHHHhcCCCEEEeCCchHHHHHHHHHh--CCC
Confidence 3455554 899885 345777776665 48888887754 222223333222222221 11111 346
Q ss_pred cchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 388 LDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 388 FDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
+|+|+..-. .. .+.+..+.|+|||.+++..
T Consensus 236 ~Dvvid~~g-----~~-----~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 236 VDIILDMIG-----AA-----YFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp EEEEEESCC-----GG-----GHHHHHHTEEEEEEEEECC
T ss_pred ceEEEECCC-----HH-----HHHHHHHHhccCCEEEEEE
Confidence 888875332 11 4778889999999988753
No 368
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=68.14 E-value=9.9 Score=37.58 Aligned_cols=88 Identities=14% Similarity=0.091 Sum_probs=49.5
Q ss_pred CeEEEECCCC-cHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCCC------Cccchheeccccc
Q 046488 327 RIGLDFSIGT-GTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFD------NTLDLIHTTRFLD 398 (480)
Q Consensus 327 R~VLDVGCGt-G~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFpd------~SFDlV~ss~vL~ 398 (480)
.+||-+|+|. |..+..+++ .|..++.++.+.........+++-+.... + .. .+.+ +.+|+|+....
T Consensus 182 ~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v-~--~~-~~~~~~~~~~~~~d~vid~~g-- 255 (366)
T 2cdc_A 182 RKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY-N--SS-NGYDKLKDSVGKFDVIIDATG-- 255 (366)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE-E--CT-TCSHHHHHHHCCEEEEEECCC--
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee-c--hH-HHHHHHHHhCCCCCEEEECCC--
Confidence 4899999842 555555554 48888887754310012223333222222 2 21 2211 45888875332
Q ss_pred CccChhcHHHHH-HHHHhcccCCcEEEEee
Q 046488 399 GWIDFVLLDFIL-YDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 399 h~~d~~~l~~~L-~EI~RVLKPGG~fiI~~ 427 (480)
.. ..+ .+..+.|+|||.+++..
T Consensus 256 ---~~----~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 256 ---AD----VNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp ---CC----THHHHHHGGGEEEEEEEEECS
T ss_pred ---Ch----HHHHHHHHHHHhcCCEEEEEe
Confidence 11 156 88999999999988764
No 369
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=67.61 E-value=9.5 Score=37.61 Aligned_cols=94 Identities=13% Similarity=0.007 Sum_probs=52.3
Q ss_pred CCCCCCCCeEEEECC--CCcHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeecc-----cCC--CCCCCccc
Q 046488 320 DIKPGEIRIGLDFSI--GTGTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITIN-----QRV--PFFDNTLD 389 (480)
Q Consensus 320 ~l~~g~iR~VLDVGC--GtG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~a-----e~L--PFpd~SFD 389 (480)
++++++ +||-+|+ |.|..++.++. .|..++.++.+. ...+.+..-| ........ +.+ -...+.+|
T Consensus 159 ~~~~g~--~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~--~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~d 233 (354)
T 2j8z_A 159 NVQAGD--YVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQ--KKLQMAEKLG-AAAGFNYKKEDFSEATLKFTKGAGVN 233 (354)
T ss_dssp CCCTTC--EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH--HHHHHHHHHT-CSEEEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCCCC--EEEEECCccHHHHHHHHHHHHcCCEEEEEeCCH--HHHHHHHHcC-CcEEEecCChHHHHHHHHHhcCCCce
Confidence 455554 8999984 56666666654 588888777542 2222222222 22222211 000 01124588
Q ss_pred hheecccccCccChhcHHHHHHHHHhcccCCcEEEEeec
Q 046488 390 LIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 390 lV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
+|+.... .. .+.+..++|+|||.+++...
T Consensus 234 ~vi~~~G-----~~-----~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 234 LILDCIG-----GS-----YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp EEEESSC-----GG-----GHHHHHHHEEEEEEEEECCC
T ss_pred EEEECCC-----ch-----HHHHHHHhccCCCEEEEEec
Confidence 8774332 11 46788899999999887643
No 370
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=67.53 E-value=10 Score=37.17 Aligned_cols=99 Identities=9% Similarity=-0.021 Sum_probs=54.7
Q ss_pred HhcCCCCCCCCeEEEECC--CCcHHHHHHhh-CCC-EEEEEecCCChhHHHHHHHhCCCCeeeeccc-----CC-CCCCC
Q 046488 317 EVLDIKPGEIRIGLDFSI--GTGTFAARMRE-FNV-TLVSAIINLGAPFNEMIALRGLVPLYITINQ-----RV-PFFDN 386 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVGC--GtG~fAa~Lae-~gV-~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae-----~L-PFpd~ 386 (480)
+..+++++...+||-.|+ |.|..+..++. .|. .++.++.+. .....+..+-+.....+... .+ ....+
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~--~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~ 229 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTH--EKCILLTSELGFDAAINYKKDNVAEQLRESCPA 229 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCH--HHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTT
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCH--HHHHHHHHHcCCceEEecCchHHHHHHHHhcCC
Confidence 344566661148999997 55666666554 588 888777541 22223332222222222110 00 00112
Q ss_pred ccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 387 TLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 387 SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
.+|+|+.... ...+.+..+.|+|||++++..
T Consensus 230 ~~d~vi~~~G----------~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 230 GVDVYFDNVG----------GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp CEEEEEESCC----------HHHHHHHHHTEEEEEEEEECC
T ss_pred CCCEEEECCC----------HHHHHHHHHHhccCcEEEEEC
Confidence 5787774332 136889999999999988754
No 371
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=67.37 E-value=4.8 Score=39.09 Aligned_cols=95 Identities=14% Similarity=0.053 Sum_probs=53.9
Q ss_pred CCCCCCCCeEEEECC--CCcHHHHHHhhC-CCEEEEEecCCChhHHHHHHHhCCCCeeeec--c--cC-CCCCCCccchh
Q 046488 320 DIKPGEIRIGLDFSI--GTGTFAARMREF-NVTLVSAIINLGAPFNEMIALRGLVPLYITI--N--QR-VPFFDNTLDLI 391 (480)
Q Consensus 320 ~l~~g~iR~VLDVGC--GtG~fAa~Lae~-gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~--a--e~-LPFpd~SFDlV 391 (480)
++++++ .+||=+|+ |.|.++..+++. |..++.++.+.. ..+.+..-| ....+.. . +. .....+.+|+|
T Consensus 146 ~~~~g~-~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~--~~~~~~~lG-a~~v~~~~~~~~~~~~~~~~~~~d~v 221 (330)
T 1tt7_A 146 GLSPEK-GSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNRE--AADYLKQLG-ASEVISREDVYDGTLKALSKQQWQGA 221 (330)
T ss_dssp TCCGGG-CCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSS--THHHHHHHT-CSEEEEHHHHCSSCCCSSCCCCEEEE
T ss_pred CcCCCC-ceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH--HHHHHHHcC-CcEEEECCCchHHHHHHhhcCCccEE
Confidence 355542 15999997 567777777764 888877775432 222222223 2222221 1 11 11223468887
Q ss_pred eecccccCccChhcHHHHHHHHHhcccCCcEEEEeec
Q 046488 392 HTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 392 ~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
+-.-. . ..+.+..+.|+|||++++...
T Consensus 222 id~~g-----~-----~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 222 VDPVG-----G-----KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp EESCC-----T-----HHHHHHHTTEEEEEEEEECCC
T ss_pred EECCc-----H-----HHHHHHHHhhcCCCEEEEEec
Confidence 74321 1 258889999999999887643
No 372
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=67.01 E-value=20 Score=36.05 Aligned_cols=94 Identities=12% Similarity=0.005 Sum_probs=50.0
Q ss_pred CCCCCCCCeEEEECCCC-cHHHHHHhh-CCC-EEEEEecCCChhHHHHHHHhCCCCeeeec-cc-------CCCCCCCcc
Q 046488 320 DIKPGEIRIGLDFSIGT-GTFAARMRE-FNV-TLVSAIINLGAPFNEMIALRGLVPLYITI-NQ-------RVPFFDNTL 388 (480)
Q Consensus 320 ~l~~g~iR~VLDVGCGt-G~fAa~Lae-~gV-~Vv~vd~d~~~~~~~~iA~rglip~~~~~-ae-------~LPFpd~SF 388 (480)
.+++|+ +||=+|+|. |.++..+++ .|. .++.++.+ +.....+++-+....+.. .+ ++ .....+
T Consensus 210 ~~~~g~--~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~---~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~-t~g~g~ 283 (404)
T 3ip1_A 210 GIRPGD--NVVILGGGPIGLAAVAILKHAGASKVILSEPS---EVRRNLAKELGADHVIDPTKENFVEAVLDY-TNGLGA 283 (404)
T ss_dssp CCCTTC--EEEEECCSHHHHHHHHHHHHTTCSEEEEECSC---HHHHHHHHHHTCSEEECTTTSCHHHHHHHH-TTTCCC
T ss_pred CCCCCC--EEEEECCCHHHHHHHHHHHHcCCCEEEEECCC---HHHHHHHHHcCCCEEEcCCCCCHHHHHHHH-hCCCCC
Confidence 355554 788899864 667777776 488 78777644 233333433233322221 00 11 123468
Q ss_pred chheecccccCccChhcHHHHHHHHH----hcccCCcEEEEee
Q 046488 389 DLIHTTRFLDGWIDFVLLDFILYDWD----RVLRPGGLLWIDS 427 (480)
Q Consensus 389 DlV~ss~vL~h~~d~~~l~~~L~EI~----RVLKPGG~fiI~~ 427 (480)
|+|+-.-. .. ...+..+. ++++|||++++..
T Consensus 284 D~vid~~g-----~~---~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 284 KLFLEATG-----VP---QLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp SEEEECSS-----CH---HHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred CEEEECCC-----Cc---HHHHHHHHHHHHhccCCCcEEEEeC
Confidence 88874221 12 11344444 4459999998864
No 373
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=65.93 E-value=4.5 Score=39.63 Aligned_cols=92 Identities=17% Similarity=0.147 Sum_probs=52.1
Q ss_pred hcCCCCCCCCeEEEECCCC-cHHHHHHhh-CCC-EEEEEecCCChhHHHHHHHhCCCCeeeecc--------cCCCCCCC
Q 046488 318 VLDIKPGEIRIGLDFSIGT-GTFAARMRE-FNV-TLVSAIINLGAPFNEMIALRGLVPLYITIN--------QRVPFFDN 386 (480)
Q Consensus 318 vL~l~~g~iR~VLDVGCGt-G~fAa~Lae-~gV-~Vv~vd~d~~~~~~~~iA~rglip~~~~~a--------e~LPFpd~ 386 (480)
..++ +|+ +||-+|+|. |.++..+++ .|. .++.++.+ +.....+++ .....+... .++. .+
T Consensus 160 ~~~~-~g~--~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~---~~~~~~~~~-la~~v~~~~~~~~~~~~~~~~--~~ 230 (343)
T 2dq4_A 160 GSGV-SGK--SVLITGAGPIGLMAAMVVRASGAGPILVSDPN---PYRLAFARP-YADRLVNPLEEDLLEVVRRVT--GS 230 (343)
T ss_dssp TTCC-TTS--CEEEECCSHHHHHHHHHHHHTTCCSEEEECSC---HHHHGGGTT-TCSEEECTTTSCHHHHHHHHH--SS
T ss_pred hCCC-CCC--EEEEECCCHHHHHHHHHHHHcCCCEEEEECCC---HHHHHHHHH-hHHhccCcCccCHHHHHHHhc--CC
Confidence 3445 554 799999853 667777766 488 78877643 222222222 111111110 0111 23
Q ss_pred ccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 387 TLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 387 SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
.+|+|+-... . ...+.+..+.|+|||++++..
T Consensus 231 g~D~vid~~g-----~----~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 231 GVEVLLEFSG-----N----EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp CEEEEEECSC-----C----HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCEEEECCC-----C----HHHHHHHHHHHhcCCEEEEEe
Confidence 5787774321 1 236889999999999988753
No 374
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=64.40 E-value=7.6 Score=38.14 Aligned_cols=91 Identities=12% Similarity=-0.035 Sum_probs=52.2
Q ss_pred cCCCCCCCCeEEEECC--CCcHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCC------CCCCccc
Q 046488 319 LDIKPGEIRIGLDFSI--GTGTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVP------FFDNTLD 389 (480)
Q Consensus 319 L~l~~g~iR~VLDVGC--GtG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LP------Fpd~SFD 389 (480)
..+++|+ +||=+|+ |.|.++..+++ .|..++.+ .+ ... ...+++-+... +...+.+. .....+|
T Consensus 146 ~~~~~g~--~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~--~~~-~~~~~~lGa~~-i~~~~~~~~~~~~~~~~~g~D 218 (343)
T 3gaz_A 146 AQVQDGQ--TVLIQGGGGGVGHVAIQIALARGARVFAT-AR--GSD-LEYVRDLGATP-IDASREPEDYAAEHTAGQGFD 218 (343)
T ss_dssp TCCCTTC--EEEEETTTSHHHHHHHHHHHHTTCEEEEE-EC--HHH-HHHHHHHTSEE-EETTSCHHHHHHHHHTTSCEE
T ss_pred cCCCCCC--EEEEecCCCHHHHHHHHHHHHCCCEEEEE-eC--HHH-HHHHHHcCCCE-eccCCCHHHHHHHHhcCCCce
Confidence 3455564 8999994 45777777766 48888776 33 122 23333322222 22111000 1234688
Q ss_pred hheecccccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 390 LIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 390 lV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
+|+-.-. . ..+.+..+.|+|||.+++.
T Consensus 219 ~vid~~g-----~-----~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 219 LVYDTLG-----G-----PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp EEEESSC-----T-----HHHHHHHHHEEEEEEEEES
T ss_pred EEEECCC-----c-----HHHHHHHHHHhcCCeEEEE
Confidence 8774221 1 2688889999999998875
No 375
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=63.99 E-value=7.3 Score=39.89 Aligned_cols=38 Identities=13% Similarity=-0.001 Sum_probs=28.8
Q ss_pred hcCCCCCCCCeEEEECCCCcHHHHHHh-hC-C--CEEEEEecCC
Q 046488 318 VLDIKPGEIRIGLDFSIGTGTFAARMR-EF-N--VTLVSAIINL 357 (480)
Q Consensus 318 vL~l~~g~iR~VLDVGCGtG~fAa~La-e~-g--V~Vv~vd~d~ 357 (480)
++.+.++. +|+|||++.|.++..++ .. + ..++++.|+.
T Consensus 221 i~~l~~~~--~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p 262 (409)
T 2py6_A 221 LLRFSDSE--KMVDCGASIGESLAGLIGVTKGKFERVWMIEPDR 262 (409)
T ss_dssp SCCCCSSC--EEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCH
T ss_pred ccccCCCC--EEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCH
Confidence 44555554 89999999999999887 33 2 5789998763
No 376
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=63.76 E-value=19 Score=35.78 Aligned_cols=88 Identities=14% Similarity=0.024 Sum_probs=51.4
Q ss_pred CeEEEECC--CCcHHHHHHhhC-CCEEEEEecCCChhHHHHHHHhCCCCeeeecc-cC----C-CCCCCccchheecccc
Q 046488 327 RIGLDFSI--GTGTFAARMREF-NVTLVSAIINLGAPFNEMIALRGLVPLYITIN-QR----V-PFFDNTLDLIHTTRFL 397 (480)
Q Consensus 327 R~VLDVGC--GtG~fAa~Lae~-gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~a-e~----L-PFpd~SFDlV~ss~vL 397 (480)
.+||=+|+ |.|.++..+++. |..++.+. + +.....+++-+....+... +. + -..++.+|+|+-.-.
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~---~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g- 240 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLRLSGYIPIATC-S---PHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCIT- 240 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-C---GGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSC-
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-C---HHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCC-
Confidence 47999998 378888888764 88887764 3 2223344443333333211 00 0 011234888773221
Q ss_pred cCccChhcHHHHHHHHHhcc-cCCcEEEEee
Q 046488 398 DGWIDFVLLDFILYDWDRVL-RPGGLLWIDS 427 (480)
Q Consensus 398 ~h~~d~~~l~~~L~EI~RVL-KPGG~fiI~~ 427 (480)
. ...+....+.| |+||+++...
T Consensus 241 ----~----~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 241 ----N----VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp ----S----HHHHHHHHHHSCTTCEEEEESS
T ss_pred ----c----hHHHHHHHHHhhcCCCEEEEEe
Confidence 2 23688888999 7999988753
No 377
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=63.07 E-value=12 Score=36.11 Aligned_cols=94 Identities=12% Similarity=0.053 Sum_probs=53.4
Q ss_pred HhcCCCCCCCCeEEEEC-C-CCcHHHHHHhhC-CCEEEEEecCCChhHHHHHHHhCCCCeeeec-ccC-CCCCCCccchh
Q 046488 317 EVLDIKPGEIRIGLDFS-I-GTGTFAARMREF-NVTLVSAIINLGAPFNEMIALRGLVPLYITI-NQR-VPFFDNTLDLI 391 (480)
Q Consensus 317 ~vL~l~~g~iR~VLDVG-C-GtG~fAa~Lae~-gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~-ae~-LPFpd~SFDlV 391 (480)
+..++++|+ +||=+| + |.|.++..+++. |..++.++- ... ...+++-+....+.. .+. +.-.-+.+|+|
T Consensus 146 ~~~~~~~g~--~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~---~~~-~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v 219 (321)
T 3tqh_A 146 NQAEVKQGD--VVLIHAGAGGVGHLAIQLAKQKGTTVITTAS---KRN-HAFLKALGAEQCINYHEEDFLLAISTPVDAV 219 (321)
T ss_dssp HHTTCCTTC--EEEESSTTSHHHHHHHHHHHHTTCEEEEEEC---HHH-HHHHHHHTCSEEEETTTSCHHHHCCSCEEEE
T ss_pred HhcCCCCCC--EEEEEcCCcHHHHHHHHHHHHcCCEEEEEec---cch-HHHHHHcCCCEEEeCCCcchhhhhccCCCEE
Confidence 345566775 788886 4 457788777764 888877652 122 333443333333221 111 10001458877
Q ss_pred eecccccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 392 HTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 392 ~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
+-.-. . ..+.+..+.|+|||+++..
T Consensus 220 ~d~~g------~----~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 220 IDLVG------G----DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EESSC------H----HHHHHHGGGEEEEEEEEEC
T ss_pred EECCC------c----HHHHHHHHhccCCCEEEEe
Confidence 74221 1 1348899999999998875
No 378
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=62.80 E-value=15 Score=35.61 Aligned_cols=93 Identities=18% Similarity=0.158 Sum_probs=52.5
Q ss_pred CCCCCCCCeEEEECC--CCcHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeecc-----cCCC--CCCCccc
Q 046488 320 DIKPGEIRIGLDFSI--GTGTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITIN-----QRVP--FFDNTLD 389 (480)
Q Consensus 320 ~l~~g~iR~VLDVGC--GtG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~a-----e~LP--Fpd~SFD 389 (480)
+++++ ++||-+|+ |.|..+..++. .|..++.++.+. ........-| .....+.. +.+- .....+|
T Consensus 142 ~~~~g--~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~--~~~~~~~~~g-~~~~~d~~~~~~~~~i~~~~~~~~~d 216 (333)
T 1wly_A 142 KVKPG--DYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTE--EKAETARKLG-CHHTINYSTQDFAEVVREITGGKGVD 216 (333)
T ss_dssp CCCTT--CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSH--HHHHHHHHHT-CSEEEETTTSCHHHHHHHHHTTCCEE
T ss_pred CCCCC--CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHcC-CCEEEECCCHHHHHHHHHHhCCCCCe
Confidence 45555 48999995 66777666654 588888877542 2222222223 22222211 0000 1123588
Q ss_pred hheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 390 LIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 390 lV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
+|+.+.. . . .+.+..+.|+|||+++...
T Consensus 217 ~vi~~~g-----~-~----~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 217 VVYDSIG-----K-D----TLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp EEEECSC-----T-T----THHHHHHTEEEEEEEEECC
T ss_pred EEEECCc-----H-H----HHHHHHHhhccCCEEEEEe
Confidence 8874332 1 1 5788899999999988754
No 379
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=61.11 E-value=11 Score=37.12 Aligned_cols=91 Identities=18% Similarity=0.148 Sum_probs=51.7
Q ss_pred CCC-CCCCCeEEEECCC-CcHHHHHHhhC-CCEEEEEecCCChhHHHHHHH-hCCCCeeeec-----ccCCCCCCCccch
Q 046488 320 DIK-PGEIRIGLDFSIG-TGTFAARMREF-NVTLVSAIINLGAPFNEMIAL-RGLVPLYITI-----NQRVPFFDNTLDL 390 (480)
Q Consensus 320 ~l~-~g~iR~VLDVGCG-tG~fAa~Lae~-gV~Vv~vd~d~~~~~~~~iA~-rglip~~~~~-----ae~LPFpd~SFDl 390 (480)
++. +|+ +||=+|+| .|.++..+++. |..++.++.+. .....+. +-+....+.. ..++. +.+|+
T Consensus 176 ~~~~~g~--~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~---~~~~~~~~~lGa~~vi~~~~~~~~~~~~---~g~D~ 247 (357)
T 2cf5_A 176 GLKQPGL--RGGILGLGGVGHMGVKIAKAMGHHVTVISSSN---KKREEALQDLGADDYVIGSDQAKMSELA---DSLDY 247 (357)
T ss_dssp STTSTTC--EEEEECCSHHHHHHHHHHHHHTCEEEEEESST---THHHHHHTTSCCSCEEETTCHHHHHHST---TTEEE
T ss_pred CCCCCCC--EEEEECCCHHHHHHHHHHHHCCCeEEEEeCCh---HHHHHHHHHcCCceeeccccHHHHHHhc---CCCCE
Confidence 455 564 78889876 35666666654 88888777553 2222333 3222222221 11121 35888
Q ss_pred heecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 391 IHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 391 V~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
|+-.-. ... .+.+..+.|||||++++..
T Consensus 248 vid~~g-----~~~----~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 248 VIDTVP-----VHH----ALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp EEECCC-----SCC----CSHHHHTTEEEEEEEEECS
T ss_pred EEECCC-----ChH----HHHHHHHHhccCCEEEEeC
Confidence 874322 111 3567789999999988764
No 380
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=61.10 E-value=7.5 Score=38.36 Aligned_cols=41 Identities=12% Similarity=0.004 Sum_probs=33.1
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHhCC
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALRGL 370 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rgl 370 (480)
..|||-=||+|+.+.+....|...++++++ +....++.++.
T Consensus 254 ~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~---~~~~~~~~~r~ 294 (323)
T 1boo_A 254 DLVVDIFGGSNTTGLVAERESRKWISFEMK---PEYVAASAFRF 294 (323)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCEEEEEESC---HHHHHHHHGGG
T ss_pred CEEEECCCCCCHHHHHHHHcCCCEEEEeCC---HHHHHHHHHHH
Confidence 389999999999999999889999999876 44555666553
No 381
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=59.09 E-value=65 Score=31.01 Aligned_cols=97 Identities=11% Similarity=-0.127 Sum_probs=52.3
Q ss_pred hcCCCCCCCCeEEEECCCC-cHHHHHHhh-CCCEE-EEEecCCChhHHHHHHHhCCCCeeeeccc-CC------CCCCCc
Q 046488 318 VLDIKPGEIRIGLDFSIGT-GTFAARMRE-FNVTL-VSAIINLGAPFNEMIALRGLVPLYITINQ-RV------PFFDNT 387 (480)
Q Consensus 318 vL~l~~g~iR~VLDVGCGt-G~fAa~Lae-~gV~V-v~vd~d~~~~~~~~iA~rglip~~~~~ae-~L------PFpd~S 387 (480)
...+.+++ +||=.|+|. |.++..+++ .|..+ +.++.+ +.....+++-+....+...+ .. -...+-
T Consensus 155 ~~~~~~g~--~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~---~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g 229 (346)
T 4a2c_A 155 LAQGCENK--NVIIIGAGTIGLLAIQCAVALGAKSVTAIDIS---SEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRF 229 (346)
T ss_dssp HTTCCTTS--EEEEECCSHHHHHHHHHHHHTTCSEEEEEESC---HHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCS
T ss_pred HhccCCCC--EEEEECCCCcchHHHHHHHHcCCcEEEEEech---HHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCC
Confidence 33455664 788899875 445666665 36554 444433 23334445433333322111 00 012234
Q ss_pred cchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeec
Q 046488 388 LDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSF 428 (480)
Q Consensus 388 FDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f 428 (480)
+|+|+-... . ...+....++|||||.+++...
T Consensus 230 ~d~v~d~~G-----~----~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 230 NQLILETAG-----V----PQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp SEEEEECSC-----S----HHHHHHHHHHCCTTCEEEECCC
T ss_pred ccccccccc-----c----cchhhhhhheecCCeEEEEEec
Confidence 565553211 1 2478889999999999988643
No 382
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=58.54 E-value=13 Score=35.24 Aligned_cols=46 Identities=11% Similarity=-0.063 Sum_probs=30.2
Q ss_pred HHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceee---EEEE
Q 046488 406 LDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKH---KWVV 454 (480)
Q Consensus 406 l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl---~W~~ 454 (480)
+...+.++.|+|||||.+++.. .......+...+...||.-. -|..
T Consensus 53 ~~~~l~~~~~~Lk~~g~i~v~~---~d~~~~~~~~~~~~~gf~~~~~iiW~K 101 (260)
T 1g60_A 53 TYRWIDKVLDKLDKDGSLYIFN---TPFNCAFICQYLVSKGMIFQNWITWDK 101 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEE---CHHHHHHHHHHHHHTTCEEEEEEEECC
T ss_pred HHHHHHHHHHHhcCCeEEEEEc---CcHHHHHHHHHHHhhccceeEEEEEEe
Confidence 3568899999999999988853 11122334556677788543 3654
No 383
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=57.64 E-value=29 Score=33.94 Aligned_cols=96 Identities=15% Similarity=0.087 Sum_probs=51.9
Q ss_pred CCCCC-CCCeEEEECC--CCcHHHHHHhhC-CCEEEEEecCCCh-hHHHHHHHhCCCCeeeecc----cC----CC-C--
Q 046488 320 DIKPG-EIRIGLDFSI--GTGTFAARMREF-NVTLVSAIINLGA-PFNEMIALRGLVPLYITIN----QR----VP-F-- 383 (480)
Q Consensus 320 ~l~~g-~iR~VLDVGC--GtG~fAa~Lae~-gV~Vv~vd~d~~~-~~~~~iA~rglip~~~~~a----e~----LP-F-- 383 (480)
++++| + +||=+|+ |.|.++..+++. |..++.++-+... ......+++-+....+... +. +- .
T Consensus 163 ~~~~g~~--~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~ 240 (364)
T 1gu7_A 163 KLTPGKD--WFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIK 240 (364)
T ss_dssp CCCTTTC--EEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHH
T ss_pred ccCCCCc--EEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhh
Confidence 45566 4 7998886 567788888764 8888777633321 1111222232222222211 11 10 0
Q ss_pred -CCCccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 384 -FDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 384 -pd~SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
..+.+|+|+-.-. .. .+.+..+.|+|||+++...
T Consensus 241 ~~~~g~Dvvid~~G-----~~-----~~~~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 241 QSGGEAKLALNCVG-----GK-----SSTGIARKLNNNGLMLTYG 275 (364)
T ss_dssp HHTCCEEEEEESSC-----HH-----HHHHHHHTSCTTCEEEECC
T ss_pred ccCCCceEEEECCC-----ch-----hHHHHHHHhccCCEEEEec
Confidence 1235887773221 11 2337789999999988754
No 384
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=56.56 E-value=8 Score=34.53 Aligned_cols=44 Identities=11% Similarity=0.104 Sum_probs=29.8
Q ss_pred CCCCCCCccchheecccccCccChhcH-HHHHHHHHhcccCCcEEEE
Q 046488 380 RVPFFDNTLDLIHTTRFLDGWIDFVLL-DFILYDWDRVLRPGGLLWI 425 (480)
Q Consensus 380 ~LPFpd~SFDlV~ss~vL~h~~d~~~l-~~~L~EI~RVLKPGG~fiI 425 (480)
...+++++||.|+-..--.. +...+ ..++.-+.+.|||||.|..
T Consensus 52 ~VsLp~stYD~V~~lt~~~~--~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 52 SITLENAKYETVHYLTPEAQ--TDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCCCSSSCCSEEEECCCSS--CSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred cccCCcccccEEEEecCCcc--chhhcCHHHHHHHHHHhCCCCEEEe
Confidence 45577999999995321110 10111 4589999999999999875
No 385
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=55.29 E-value=23 Score=29.89 Aligned_cols=106 Identities=9% Similarity=-0.045 Sum_probs=55.6
Q ss_pred eEEEECCCC-cH-HHHHHhhCCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCC----CCCCccchheecccccCcc
Q 046488 328 IGLDFSIGT-GT-FAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVP----FFDNTLDLIHTTRFLDGWI 401 (480)
Q Consensus 328 ~VLDVGCGt-G~-fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LP----Fpd~SFDlV~ss~vL~h~~ 401 (480)
+|+=+|+|. |. ++..|.+.|..++.++.+. .....+. +.++..+.++..... ..-..+|+|++.. .
T Consensus 9 ~viIiG~G~~G~~la~~L~~~g~~v~vid~~~--~~~~~~~-~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~-----~ 80 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLASDIPLVVIETSR--TRVDELR-ERGVRAVLGNAANEEIMQLAHLECAKWLILTI-----P 80 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEESCH--HHHHHHH-HTTCEEEESCTTSHHHHHHTTGGGCSEEEECC-----S
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCH--HHHHHHH-HcCCCEEECCCCCHHHHHhcCcccCCEEEEEC-----C
Confidence 588888874 33 4455666788888887652 2333333 344555555422110 1123567766432 2
Q ss_pred ChhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCce
Q 046488 402 DFVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYK 448 (480)
Q Consensus 402 d~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfk 448 (480)
++.. ...+....|-+.|+..++.... . ....+.++++|..
T Consensus 81 ~~~~-n~~~~~~a~~~~~~~~iiar~~---~---~~~~~~l~~~G~d 120 (140)
T 3fwz_A 81 NGYE-AGEIVASARAKNPDIEIIARAH---Y---DDEVAYITERGAN 120 (140)
T ss_dssp CHHH-HHHHHHHHHHHCSSSEEEEEES---S---HHHHHHHHHTTCS
T ss_pred ChHH-HHHHHHHHHHHCCCCeEEEEEC---C---HHHHHHHHHCCCC
Confidence 2221 2235567788889988665321 1 1233455666654
No 386
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=54.44 E-value=12 Score=37.08 Aligned_cols=91 Identities=19% Similarity=0.116 Sum_probs=50.4
Q ss_pred CCC-CCCCCeEEEECCCC-cHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeec-----ccCCCCCCCccchh
Q 046488 320 DIK-PGEIRIGLDFSIGT-GTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITI-----NQRVPFFDNTLDLI 391 (480)
Q Consensus 320 ~l~-~g~iR~VLDVGCGt-G~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~-----ae~LPFpd~SFDlV 391 (480)
.+. +|+ +||=+|+|. |.++..+++ .|..++.++.+. .....+.++-+....+.. ..++. +.+|+|
T Consensus 183 ~~~~~g~--~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~--~~~~~~~~~lGa~~v~~~~~~~~~~~~~---~~~D~v 255 (366)
T 1yqd_A 183 GLDEPGK--HIGIVGLGGLGHVAVKFAKAFGSKVTVISTSP--SKKEEALKNFGADSFLVSRDQEQMQAAA---GTLDGI 255 (366)
T ss_dssp TCCCTTC--EEEEECCSHHHHHHHHHHHHTTCEEEEEESCG--GGHHHHHHTSCCSEEEETTCHHHHHHTT---TCEEEE
T ss_pred CcCCCCC--EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHhcCCceEEeccCHHHHHHhh---CCCCEE
Confidence 455 554 788898753 556666665 488887776542 222222223223222221 11121 358888
Q ss_pred eecccccCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 392 HTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 392 ~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
+-.-.. .. .+.+..+.|+|||+++..
T Consensus 256 id~~g~-----~~----~~~~~~~~l~~~G~iv~~ 281 (366)
T 1yqd_A 256 IDTVSA-----VH----PLLPLFGLLKSHGKLILV 281 (366)
T ss_dssp EECCSS-----CC----CSHHHHHHEEEEEEEEEC
T ss_pred EECCCc-----HH----HHHHHHHHHhcCCEEEEE
Confidence 753221 11 356677899999998875
No 387
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=53.96 E-value=1.8e+02 Score=28.88 Aligned_cols=121 Identities=13% Similarity=0.064 Sum_probs=65.8
Q ss_pred eEEEECCCCcHHHHHHhhCCC--EE-EEEecCCChhHHHHHHHh-CCCCeeeecccCCC---CCCCccchheeccc---c
Q 046488 328 IGLDFSIGTGTFAARMREFNV--TL-VSAIINLGAPFNEMIALR-GLVPLYITINQRVP---FFDNTLDLIHTTRF---L 397 (480)
Q Consensus 328 ~VLDVGCGtG~fAa~Lae~gV--~V-v~vd~d~~~~~~~~iA~r-glip~~~~~ae~LP---Fpd~SFDlV~ss~v---L 397 (480)
+++|+-||.|.+...+.+.|+ .+ .+++.+ ..+....... +....+.++...+. ++...+|+++.+.- +
T Consensus 5 ~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d--~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPCQ~f 82 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWKESGLDGEIVAAVDIN--TVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSPPCQPF 82 (333)
T ss_dssp EEEEETCTTTHHHHHHHHHTCSEEEEEEECCC--HHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEECCCCCCS
T ss_pred EEEEECcCccHHHHHHHHcCCCceEEEEEeCC--HHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEecCCCcch
Confidence 799999999999999988776 43 344433 3343333332 22334444433332 22336899885421 1
Q ss_pred c------CccChhcHHHHHHHHHhcc---c-CCcEEEEee---ccCChhhHHHHHHHHHHcCceeeEEEEe
Q 046488 398 D------GWIDFVLLDFILYDWDRVL---R-PGGLLWIDS---FFCAKEDMNDYLEVFKMLKYKKHKWVVV 455 (480)
Q Consensus 398 ~------h~~d~~~l~~~L~EI~RVL---K-PGG~fiI~~---f~~~~edL~~~~~~l~~lGfkkl~W~~~ 455 (480)
+ ...+.. ..++.|+.|++ | |- +|++-+ +.. ....+.+.+.++.+||. +.|.+.
T Consensus 83 S~ag~~~~~~d~r--~~L~~~~~r~i~~~~~P~-~~vlENV~gl~~-~~~~~~i~~~l~~~GY~-v~~~vl 148 (333)
T 4h0n_A 83 TRNGKYLDDNDPR--TNSFLYLIGILDQLDNVD-YILMENVKGFEN-STVRNLFIDKLKECNFI-YQEFLL 148 (333)
T ss_dssp EETTEECCTTCTT--SCCHHHHHHHGGGCTTCC-EEEEEECTTGGG-SHHHHHHHHHHHHTTEE-EEEEEE
T ss_pred hhhhhccCCcCcc--cccHHHHHHHHHHhcCCC-EEEEecchhhhh-hhHHHHHHHHHHhCCCe-EEEEEe
Confidence 1 111211 23566666665 4 63 333432 221 23356788889999997 455554
No 388
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=52.46 E-value=26 Score=38.34 Aligned_cols=85 Identities=18% Similarity=0.235 Sum_probs=47.7
Q ss_pred CCCCCCCccchheec----ccccCcc---C-hhcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHH-HHHHHcCceee
Q 046488 380 RVPFFDNTLDLIHTT----RFLDGWI---D-FVLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYL-EVFKMLKYKKH 450 (480)
Q Consensus 380 ~LPFpd~SFDlV~ss----~vL~h~~---d-~~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~-~~l~~lGfkkl 450 (480)
-+| ++..||+|+.. +-.||+. | .-.+..+-....+.|+|||.+++..|---+..-+... .+.++ |+..
T Consensus 215 G~p-~~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyADr~sE~vv~alaRk--F~~~ 291 (670)
T 4gua_A 215 GFP-PQARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYADRNSEDVVTALARK--FVRV 291 (670)
T ss_dssp CCC-CCCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCSHHHHHHHHHHHHT--EEEE
T ss_pred CCC-CCCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeeccccchHHHHHHHHhh--eeee
Confidence 466 35789999974 2334442 1 1234556678889999999999886543322223333 44444 5544
Q ss_pred EEEEeeccCCCCcceeEE
Q 046488 451 KWVVVPKRDKDDREVFFS 468 (480)
Q Consensus 451 ~W~~~~k~d~~~~E~~ls 468 (480)
+-.. ++-...+.||++.
T Consensus 292 rv~~-p~~~~snTEv~~~ 308 (670)
T 4gua_A 292 SAAR-PDCVSSNTEMYLI 308 (670)
T ss_dssp EEEC-CTTCSBTTCEEEE
T ss_pred eeeC-CCccccCceEEEE
Confidence 3222 2111245788874
No 389
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=52.04 E-value=24 Score=36.07 Aligned_cols=37 Identities=22% Similarity=0.261 Sum_probs=28.9
Q ss_pred hcCCCCCCCCeEEEECCCCcHHHHHHhhC---CCEEEEEecC
Q 046488 318 VLDIKPGEIRIGLDFSIGTGTFAARMREF---NVTLVSAIIN 356 (480)
Q Consensus 318 vL~l~~g~iR~VLDVGCGtG~fAa~Lae~---gV~Vv~vd~d 356 (480)
.|.+++|. +++|..||.|.-+..++++ +-.++++|.+
T Consensus 52 ~L~i~pgg--iyVD~TlG~GGHS~~iL~~lg~~GrVig~D~D 91 (347)
T 3tka_A 52 GLNIRPDG--IYIDGTFGRGGHSRLILSQLGEEGRLLAIDRD 91 (347)
T ss_dssp HTCCCTTC--EEEESCCTTSHHHHHHHTTCCTTCEEEEEESC
T ss_pred hhCCCCCC--EEEEeCcCCCHHHHHHHHhCCCCCEEEEEECC
Confidence 44566664 8999999999999999876 3468888765
No 390
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=51.94 E-value=65 Score=31.84 Aligned_cols=113 Identities=13% Similarity=0.030 Sum_probs=63.1
Q ss_pred eEEEECCCCcHHHHHHhhCCCEEEEEecCCChhHHHHHHHh----CCCCeeeec----ccCCCCCCCccchheecccccC
Q 046488 328 IGLDFSIGTGTFAARMREFNVTLVSAIINLGAPFNEMIALR----GLVPLYITI----NQRVPFFDNTLDLIHTTRFLDG 399 (480)
Q Consensus 328 ~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~r----glip~~~~~----ae~LPFpd~SFDlV~ss~vL~h 399 (480)
.+||+=+|||.++..+.+.+-.++-++.+ ......+.+. +.+.++..+ ...+--+...||+|+..=-
T Consensus 94 ~~LDlfaGSGaLgiEaLS~~d~~vfvE~~--~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPP--- 168 (283)
T 2oo3_A 94 STLSYYPGSPYFAINQLRSQDRLYLCELH--PTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPS--- 168 (283)
T ss_dssp SSCCEEECHHHHHHHHSCTTSEEEEECCS--HHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCC---
T ss_pred CceeEeCCcHHHHHHHcCCCCeEEEEeCC--HHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCC---
Confidence 48999999999999999877666666544 1222222111 112223333 1122123456999996321
Q ss_pred ccChhcHHHHHHHHHh--cccCCcEEEEeeccC--ChhhHHHHHHHHHHcCc
Q 046488 400 WIDFVLLDFILYDWDR--VLRPGGLLWIDSFFC--AKEDMNDYLEVFKMLKY 447 (480)
Q Consensus 400 ~~d~~~l~~~L~EI~R--VLKPGG~fiI~~f~~--~~edL~~~~~~l~~lGf 447 (480)
+......+.++..+.. .+.|+|.+++ |+. .+.+.+.+.+.++..|.
T Consensus 169 Ye~k~~~~~vl~~L~~~~~r~~~Gi~v~--WYPi~~~~~~~~~~~~l~~~~~ 218 (283)
T 2oo3_A 169 YERKEEYKEIPYAIKNAYSKFSTGLYCV--WYPVVNKAWTEQFLRKMREISS 218 (283)
T ss_dssp CCSTTHHHHHHHHHHHHHHHCTTSEEEE--EEEESSHHHHHHHHHHHHHHCS
T ss_pred CCCCcHHHHHHHHHHHhCccCCCeEEEE--EEeccchHHHHHHHHHHHhcCC
Confidence 2211223445555554 4679998777 554 34445666677777676
No 391
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=51.26 E-value=34 Score=33.74 Aligned_cols=100 Identities=12% Similarity=-0.026 Sum_probs=57.3
Q ss_pred CCeEEEECCCCcHHHHHHhh-CCCEEEEEecCCChhHHH----HHHHhCC--CCe--ee-eccc-----CC---CCCCCc
Q 046488 326 IRIGLDFSIGTGTFAARMRE-FNVTLVSAIINLGAPFNE----MIALRGL--VPL--YI-TINQ-----RV---PFFDNT 387 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae-~gV~Vv~vd~d~~~~~~~----~iA~rgl--ip~--~~-~~ae-----~L---PFpd~S 387 (480)
++.|+++|||-=+.+.++.. .++.++.+|. +.... .+...+. -.. ++ .+.. .+ -|..+.
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~~~~~~v~evD~---P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~ 179 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDWPTGTTVYEIDQ---PKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSA 179 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCCCTTCEEEEEEC---HHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTS
T ss_pred CCeEEEeCCCCCchhhhccCCCCcEEEEcCC---HHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCC
Confidence 56899999999999888873 3577777762 11111 1221111 111 11 1111 11 111122
Q ss_pred cchheecccccCccChhcHHHHHHHHHhcccCCcEEEEeecc
Q 046488 388 LDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFF 429 (480)
Q Consensus 388 FDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~f~ 429 (480)
-=++++-.+++++.+. ....++..+...+.||+++++....
T Consensus 180 Pt~~i~Egvl~Yl~~~-~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 180 RTAWLAEGLLMYLPAT-AQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp CEEEEECSCGGGSCHH-HHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred CEEEEEechHhhCCHH-HHHHHHHHHHHhCCCCeEEEEEecC
Confidence 2244555666655543 4577899999989999999887644
No 392
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=51.19 E-value=34 Score=33.80 Aligned_cols=92 Identities=12% Similarity=-0.034 Sum_probs=51.8
Q ss_pred CCCCCCCeEEEEC--CCCcHHHHHHhh-CCCEEEEEecCCChhHHHHHHHhCCCCeeeec-----ccCCCCCCCccchhe
Q 046488 321 IKPGEIRIGLDFS--IGTGTFAARMRE-FNVTLVSAIINLGAPFNEMIALRGLVPLYITI-----NQRVPFFDNTLDLIH 392 (480)
Q Consensus 321 l~~g~iR~VLDVG--CGtG~fAa~Lae-~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~-----ae~LPFpd~SFDlV~ 392 (480)
+++|+ +||=+| .|.|..+..+++ .|..++.++ +. ... ..+++-+....+.. .+.+. ....+|+|+
T Consensus 181 ~~~g~--~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~--~~~-~~~~~lGa~~v~~~~~~~~~~~~~-~~~g~D~vi 253 (375)
T 2vn8_A 181 NCTGK--RVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQ--DAS-ELVRKLGADDVIDYKSGSVEEQLK-SLKPFDFIL 253 (375)
T ss_dssp TCTTC--EEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CG--GGH-HHHHHTTCSEEEETTSSCHHHHHH-TSCCBSEEE
T ss_pred cCCCC--EEEEECCCCHHHHHHHHHHHhCCCEEEEEe-Ch--HHH-HHHHHcCCCEEEECCchHHHHHHh-hcCCCCEEE
Confidence 44554 899998 346777777766 488887765 31 222 23333333332221 11110 013588877
Q ss_pred ecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 393 TTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 393 ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
-.-. .. ...+.+..+.|+|||.++...
T Consensus 254 d~~g-----~~---~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 254 DNVG-----GS---TETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp ESSC-----TT---HHHHGGGGBCSSSCCEEEESC
T ss_pred ECCC-----Ch---hhhhHHHHHhhcCCcEEEEeC
Confidence 4321 11 125678889999999988764
No 393
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=49.26 E-value=28 Score=34.74 Aligned_cols=87 Identities=23% Similarity=0.329 Sum_probs=48.2
Q ss_pred CCCCCCCccchheecc----cccCcc---Ch-hcHHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCceeeE
Q 046488 380 RVPFFDNTLDLIHTTR----FLDGWI---DF-VLLDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYKKHK 451 (480)
Q Consensus 380 ~LPFpd~SFDlV~ss~----vL~h~~---d~-~~l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfkkl~ 451 (480)
-+|-.-+.||+|++.- -.||.. |. ..+..+-....+.|+|||.+++..|--.+..-+.....+.+ -|+..+
T Consensus 204 G~P~~~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~SE~vV~alAR-kF~~~r 282 (324)
T 3trk_A 204 GLPATLGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRTSERVICVLGR-KFRSSR 282 (324)
T ss_dssp CCCGGGCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHHHHHHHHHHHT-TEEEEE
T ss_pred CCCCcCCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccchHHHHHHHHh-hheeee
Confidence 3443447999999752 233432 11 12345667889999999999998764333333444444433 255544
Q ss_pred EEEeeccCCCCcceeEE
Q 046488 452 WVVVPKRDKDDREVFFS 468 (480)
Q Consensus 452 W~~~~k~d~~~~E~~ls 468 (480)
-.. ++-.....|+++.
T Consensus 283 v~~-P~cv~snTEv~~v 298 (324)
T 3trk_A 283 ALK-PPCVTSNTEMFFL 298 (324)
T ss_dssp EEC-CTTCCBTTCEEEE
T ss_pred eec-CccccccceEEEE
Confidence 322 1111135788774
No 394
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=45.89 E-value=15 Score=36.42 Aligned_cols=30 Identities=20% Similarity=0.121 Sum_probs=27.0
Q ss_pred CeEEEECCCCcHHHHHHhhCCCEEEEEecC
Q 046488 327 RIGLDFSIGTGTFAARMREFNVTLVSAIIN 356 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~Lae~gV~Vv~vd~d 356 (480)
..|||-=||+|+.+.+....|-..++++++
T Consensus 244 ~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~ 273 (319)
T 1eg2_A 244 STVLDFFAGSGVTARVAIQEGRNSICTDAA 273 (319)
T ss_dssp CEEEETTCTTCHHHHHHHHHTCEEEEEESS
T ss_pred CEEEecCCCCCHHHHHHHHcCCcEEEEECC
Confidence 389999999999999888888889999876
No 395
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=38.27 E-value=1.3e+02 Score=27.94 Aligned_cols=85 Identities=18% Similarity=0.043 Sum_probs=46.8
Q ss_pred eEEEECCCC-c-HHHHHHhhCCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCCCCccchheecccccCccChhc
Q 046488 328 IGLDFSIGT-G-TFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFDNTLDLIHTTRFLDGWIDFVL 405 (480)
Q Consensus 328 ~VLDVGCGt-G-~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d~~~ 405 (480)
+|.=||+|. | .++..|.+.|..++.++.+ ......+...+.........+.+ ...|+|+..- + +..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~----~~~D~vi~av-----~-~~~ 69 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ--QSTCEKAVERQLVDEAGQDLSLL----QTAKIIFLCT-----P-IQL 69 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC--HHHHHHHHHTTSCSEEESCGGGG----TTCSEEEECS-----C-HHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECC--HHHHHHHHhCCCCccccCCHHHh----CCCCEEEEEC-----C-HHH
Confidence 466688875 2 3556677778877766543 23333444333321111112222 4578877532 2 222
Q ss_pred HHHHHHHHHhcccCCcEEE
Q 046488 406 LDFILYDWDRVLRPGGLLW 424 (480)
Q Consensus 406 l~~~L~EI~RVLKPGG~fi 424 (480)
+..++.++...++||..++
T Consensus 70 ~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 70 ILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp HHHHHHHHGGGSCTTCEEE
T ss_pred HHHHHHHHHhhCCCCCEEE
Confidence 3568888888899887653
No 396
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=37.22 E-value=29 Score=33.85 Aligned_cols=86 Identities=3% Similarity=-0.154 Sum_probs=45.0
Q ss_pred eEEEE-CC-CCcHHHHHHhhC-CCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCC--------CCccchheeccc
Q 046488 328 IGLDF-SI-GTGTFAARMREF-NVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFF--------DNTLDLIHTTRF 396 (480)
Q Consensus 328 ~VLDV-GC-GtG~fAa~Lae~-gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFp--------d~SFDlV~ss~v 396 (480)
+||=. |+ |.|..+..+++. |+.++.++.+. ...+.+..-| ....+... .-.+. .+.+|+|+-.-.
T Consensus 167 ~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~--~~~~~~~~~G-a~~~~~~~-~~~~~~~v~~~~~~~g~D~vid~~g 242 (349)
T 3pi7_A 167 AFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRD--EQIALLKDIG-AAHVLNEK-APDFEATLREVMKAEQPRIFLDAVT 242 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHTCEEEEEESCG--GGHHHHHHHT-CSEEEETT-STTHHHHHHHHHHHHCCCEEEESSC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--HHHHHHHHcC-CCEEEECC-cHHHHHHHHHHhcCCCCcEEEECCC
Confidence 55543 33 245566666654 88888887542 2222222223 22222211 11110 135777774221
Q ss_pred ccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 397 LDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 397 L~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
. ..+.+..+.|+|||.+++..
T Consensus 243 ------~----~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 243 ------G----PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp ------H----HHHHHHHHHSCTTCEEEECC
T ss_pred ------C----hhHHHHHhhhcCCCEEEEEe
Confidence 1 24578889999999998864
No 397
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=33.89 E-value=1.5e+02 Score=28.73 Aligned_cols=89 Identities=17% Similarity=0.082 Sum_probs=51.2
Q ss_pred CCeEEEECCCC--cHHHHHHhhCCC--EEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCCCCccchheecccccCcc
Q 046488 326 IRIGLDFSIGT--GTFAARMREFNV--TLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFDNTLDLIHTTRFLDGWI 401 (480)
Q Consensus 326 iR~VLDVGCGt--G~fAa~Lae~gV--~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~ 401 (480)
..+|.=||+|. |.++..|++.|. .++..+.+ ....+.+...|.+.......+.+ .-...|+|+.+ .+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~--~~~~~~a~~~G~~~~~~~~~~~~--~~~~aDvVila-----vp 103 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN--PESISKAVDLGIIDEGTTSIAKV--EDFSPDFVMLS-----SP 103 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC--HHHHHHHHHTTSCSEEESCTTGG--GGGCCSEEEEC-----SC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECC--HHHHHHHHHCCCcchhcCCHHHH--hhccCCEEEEe-----CC
Confidence 35788899884 356777888887 78777654 23333444444332222111110 12346777743 22
Q ss_pred ChhcHHHHHHHHHhcccCCcEEE
Q 046488 402 DFVLLDFILYDWDRVLRPGGLLW 424 (480)
Q Consensus 402 d~~~l~~~L~EI~RVLKPGG~fi 424 (480)
. ..+..++.++...|+||..++
T Consensus 104 ~-~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 104 V-RTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp G-GGHHHHHHHHHHHSCTTCEEE
T ss_pred H-HHHHHHHHHHhhccCCCcEEE
Confidence 2 223568899999999987643
No 398
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=33.69 E-value=41 Score=32.86 Aligned_cols=91 Identities=19% Similarity=0.133 Sum_probs=48.8
Q ss_pred hcCCCCCCCCeEEEECC--CCcHHHHHHhhC--CCEEEEEecCCChhHHHHHHHhCCCCeeeec-------ccCCCCCCC
Q 046488 318 VLDIKPGEIRIGLDFSI--GTGTFAARMREF--NVTLVSAIINLGAPFNEMIALRGLVPLYITI-------NQRVPFFDN 386 (480)
Q Consensus 318 vL~l~~g~iR~VLDVGC--GtG~fAa~Lae~--gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~-------ae~LPFpd~ 386 (480)
...+++|+ +||=.|+ |.|.++..+++. +..++.++-+ .... .++.| ....+.. ..++ ..+
T Consensus 137 ~~~~~~g~--~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~~---~~~~-~~~~g-a~~~~~~~~~~~~~~~~~--~~~ 207 (349)
T 4a27_A 137 VANLREGM--SVLVHSAGGGVGQAVAQLCSTVPNVTVFGTAST---FKHE-AIKDS-VTHLFDRNADYVQEVKRI--SAE 207 (349)
T ss_dssp TSCCCTTC--EEEESSTTSHHHHHHHHHHTTSTTCEEEEEECG---GGHH-HHGGG-SSEEEETTSCHHHHHHHH--CTT
T ss_pred hcCCCCCC--EEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCCH---HHHH-HHHcC-CcEEEcCCccHHHHHHHh--cCC
Confidence 34566665 8999997 457788888764 4677776521 2222 22233 2222211 1111 235
Q ss_pred ccchheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 387 TLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 387 SFDlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
.+|+|+-.-. .. .+.+..+.|+|||++++..
T Consensus 208 g~Dvv~d~~g-----~~-----~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 208 GVDIVLDCLC-----GD-----NTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp CEEEEEEECC-----------------CTTEEEEEEEEEEC
T ss_pred CceEEEECCC-----ch-----hHHHHHHHhhcCCEEEEEC
Confidence 7888884221 11 3477889999999998754
No 399
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=32.73 E-value=2.8e+02 Score=29.12 Aligned_cols=26 Identities=15% Similarity=0.089 Sum_probs=22.3
Q ss_pred CCeEEEECCCCcHHHHHHhhCCCEEE
Q 046488 326 IRIGLDFSIGTGTFAARMREFNVTLV 351 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~gV~Vv 351 (480)
.-+++|+=||.|+++..+.+.|..++
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v 113 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCV 113 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEE
T ss_pred cceEEEecCCccHHHHHHHHCCCEEE
Confidence 34799999999999999998887754
No 400
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=32.18 E-value=16 Score=36.33 Aligned_cols=30 Identities=30% Similarity=0.377 Sum_probs=24.9
Q ss_pred hcHHHHHHHHHhcccCCcEEEEeeccCChh
Q 046488 404 VLLDFILYDWDRVLRPGGLLWIDSFFCAKE 433 (480)
Q Consensus 404 ~~l~~~L~EI~RVLKPGG~fiI~~f~~~~e 433 (480)
..++.+|..+.++|+|||++++..|..-.+
T Consensus 210 ~~L~~~L~~a~~~L~~gGrl~visfHSLED 239 (285)
T 1wg8_A 210 NALKEFLEQAAEVLAPGGRLVVIAFHSLED 239 (285)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEECSHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEecCcHHH
Confidence 456789999999999999999988775443
No 401
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=30.86 E-value=5e+02 Score=29.98 Aligned_cols=126 Identities=13% Similarity=0.155 Sum_probs=66.2
Q ss_pred CCeEEEECCCCcHHHHHHhhCCC-EE-EEEecCCChhHHHHHHHhC-CCCeeeecc-----------------cCCCCCC
Q 046488 326 IRIGLDFSIGTGTFAARMREFNV-TL-VSAIINLGAPFNEMIALRG-LVPLYITIN-----------------QRVPFFD 385 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~gV-~V-v~vd~d~~~~~~~~iA~rg-lip~~~~~a-----------------e~LPFpd 385 (480)
.-+++|+=||.|+++..|...|+ .+ .+++.+ ..+.......- ....+.+++ ..+| ..
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid--~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~~di~~~~~~~lp-~~ 616 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMW--DPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLP-QK 616 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSS--HHHHHHHHHHCTTSEEECSCHHHHHHHHHHTCSBCTTCCBCC-CT
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECC--HHHHHHHHHhCCCCccccccHHHHhhhccchhhhhhhhhhcc-cC
Confidence 34799999999999999988887 43 344444 33433333221 122222211 1222 23
Q ss_pred Cccchheecc---cccCccC---------hhcHHHHHHHHHhcccCCcEEEEe---eccCC--hhhHHHHHHHHHHcCce
Q 046488 386 NTLDLIHTTR---FLDGWID---------FVLLDFILYDWDRVLRPGGLLWID---SFFCA--KEDMNDYLEVFKMLKYK 448 (480)
Q Consensus 386 ~SFDlV~ss~---vL~h~~d---------~~~l~~~L~EI~RVLKPGG~fiI~---~f~~~--~edL~~~~~~l~~lGfk 448 (480)
+.+|+|+... .+..... ...|-..+.++.+.+||--+ ++- ++... ...++.+...++.+||.
T Consensus 617 ~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~riv~~~rPk~~-llENV~glls~~~~~~~~~i~~~L~~lGY~ 695 (1002)
T 3swr_A 617 GDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFF-LLENVRNFVSFKRSMVLKLTLRCLVRMGYQ 695 (1002)
T ss_dssp TTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHHHHHHHCCSEE-EEEEEGGGGTTGGGHHHHHHHHHHHHHTCE
T ss_pred CCeeEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHHHHHHHhCCCEE-EEeccHHHhccCcchHHHHHHHHHHhcCCe
Confidence 5789998642 1111110 11112234445556688643 332 23322 22356677888999997
Q ss_pred eeEEEEee
Q 046488 449 KHKWVVVP 456 (480)
Q Consensus 449 kl~W~~~~ 456 (480)
+.|.+..
T Consensus 696 -v~~~vLn 702 (1002)
T 3swr_A 696 -CTFGVLQ 702 (1002)
T ss_dssp -EEEEEEE
T ss_pred -EEEEEEE
Confidence 4565543
No 402
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=30.77 E-value=1.5e+02 Score=28.21 Aligned_cols=70 Identities=19% Similarity=0.160 Sum_probs=44.1
Q ss_pred CeEEEECCCCcH---HHHHHhhCCCEEEEEecCCChhHHHHHHHhCCC-Ceeeec------ccCCCCCCCccchheeccc
Q 046488 327 RIGLDFSIGTGT---FAARMREFNVTLVSAIINLGAPFNEMIALRGLV-PLYITI------NQRVPFFDNTLDLIHTTRF 396 (480)
Q Consensus 327 R~VLDVGCGtG~---fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rgli-p~~~~~------ae~LPFpd~SFDlV~ss~v 396 (480)
+++|=.|.+.|. .+..|++.|..|+..+.+...+....+...+.- ..+..+ .+. -+..+..|+++.+-.
T Consensus 10 KvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~-~~~~g~iDiLVNNAG 88 (247)
T 4hp8_A 10 RKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKD-SFTDAGFDILVNNAG 88 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTT-SSTTTCCCEEEECCC
T ss_pred CEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHH-HHHhCCCCEEEECCC
Confidence 578888888875 677888899999888776544555556655542 122211 112 234577898886544
Q ss_pred c
Q 046488 397 L 397 (480)
Q Consensus 397 L 397 (480)
+
T Consensus 89 i 89 (247)
T 4hp8_A 89 I 89 (247)
T ss_dssp C
T ss_pred C
Confidence 3
No 403
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=30.24 E-value=18 Score=37.01 Aligned_cols=30 Identities=33% Similarity=0.346 Sum_probs=24.9
Q ss_pred hcHHHHHHHHHhcccCCcEEEEeeccCChh
Q 046488 404 VLLDFILYDWDRVLRPGGLLWIDSFFCAKE 433 (480)
Q Consensus 404 ~~l~~~L~EI~RVLKPGG~fiI~~f~~~~e 433 (480)
+.|+.+|..+.++|+|||+++|..|..-.+
T Consensus 251 ~~L~~~L~~a~~~L~~gGRl~VISFHSLED 280 (347)
T 3tka_A 251 EEIEQALKSSLNVLAPGGRLSIISFHSLED 280 (347)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEESSHHHH
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEecCchhH
Confidence 456789999999999999999988775443
No 404
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=29.90 E-value=2.7e+02 Score=25.38 Aligned_cols=91 Identities=13% Similarity=-0.120 Sum_probs=46.4
Q ss_pred CeEEEECCCCcHHHHHH----hhCCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCCCCccchheecccccCccC
Q 046488 327 RIGLDFSIGTGTFAARM----REFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFDNTLDLIHTTRFLDGWID 402 (480)
Q Consensus 327 R~VLDVGCGtG~fAa~L----ae~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d 402 (480)
.+||=+|+ |.++.++ .++|..|+.++-+. ........ ..+..+..+...+. -..+|+|+.........+
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~--~~~~~~~~-~~~~~~~~D~~d~~--~~~~d~vi~~a~~~~~~~ 78 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNP--DQMEAIRA-SGAEPLLWPGEEPS--LDGVTHLLISTAPDSGGD 78 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCG--GGHHHHHH-TTEEEEESSSSCCC--CTTCCEEEECCCCBTTBC
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcCh--hhhhhHhh-CCCeEEEecccccc--cCCCCEEEECCCcccccc
Confidence 47999995 7766555 45588888877542 22222222 33445555544444 456788775443332222
Q ss_pred hhcHHHHHHHHHhccc-CCcEEEEe
Q 046488 403 FVLLDFILYDWDRVLR-PGGLLWID 426 (480)
Q Consensus 403 ~~~l~~~L~EI~RVLK-PGG~fiI~ 426 (480)
+. ...+.+..+-.+ .-+.|++.
T Consensus 79 ~~--~~~l~~a~~~~~~~~~~~v~~ 101 (286)
T 3ius_A 79 PV--LAALGDQIAARAAQFRWVGYL 101 (286)
T ss_dssp HH--HHHHHHHHHHTGGGCSEEEEE
T ss_pred HH--HHHHHHHHHhhcCCceEEEEe
Confidence 21 233444444432 22455543
No 405
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=29.78 E-value=1.4e+02 Score=30.56 Aligned_cols=90 Identities=10% Similarity=-0.045 Sum_probs=51.4
Q ss_pred eEEEECCCC-cH-HHHHHhhCCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCC----CCCCccchheecccccCcc
Q 046488 328 IGLDFSIGT-GT-FAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVP----FFDNTLDLIHTTRFLDGWI 401 (480)
Q Consensus 328 ~VLDVGCGt-G~-fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LP----Fpd~SFDlV~ss~vL~h~~ 401 (480)
.|+=+|+|. |. ++..|.+.|+.++.++.+ +.....+.+.++.++.+++.+.. ..-...|+|++.. .
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~g~~vvvId~d---~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~-----~ 77 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSSGVKMVVLDHD---PDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAI-----D 77 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEECC---HHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECC-----S
T ss_pred eEEEECCCHHHHHHHHHHHHCCCCEEEEECC---HHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECC-----C
Confidence 477778764 22 334455568888887765 23333333445667766633211 1224577776532 2
Q ss_pred ChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 402 DFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 402 d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
++. ....+.+..|-+.|...++..
T Consensus 78 ~~~-~n~~i~~~ar~~~p~~~Iiar 101 (413)
T 3l9w_A 78 DPQ-TNLQLTEMVKEHFPHLQIIAR 101 (413)
T ss_dssp SHH-HHHHHHHHHHHHCTTCEEEEE
T ss_pred ChH-HHHHHHHHHHHhCCCCeEEEE
Confidence 222 245678888889999887664
No 406
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=28.25 E-value=21 Score=35.22 Aligned_cols=30 Identities=27% Similarity=0.379 Sum_probs=24.8
Q ss_pred hcHHHHHHHHHhcccCCcEEEEeeccCChh
Q 046488 404 VLLDFILYDWDRVLRPGGLLWIDSFFCAKE 433 (480)
Q Consensus 404 ~~l~~~L~EI~RVLKPGG~fiI~~f~~~~e 433 (480)
..++.+|..+.++|+|||++.|..|..-.+
T Consensus 222 ~~l~~~l~~~~~~l~~ggr~~visfhsled 251 (301)
T 1m6y_A 222 ENLKEFLKKAEDLLNPGGRIVVISFHSLED 251 (301)
T ss_dssp HHHHHHHHHGGGGEEEEEEEEEEESSHHHH
T ss_pred HHHHHHHHHHHHhhCCCCEEEEEecCcHHH
Confidence 456789999999999999999988765443
No 407
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=26.82 E-value=4e+02 Score=24.94 Aligned_cols=108 Identities=11% Similarity=0.013 Sum_probs=57.4
Q ss_pred CeEEEECCCC-c-HHHHHHhhCCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCCCCccchheecccccCccChh
Q 046488 327 RIGLDFSIGT-G-TFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFDNTLDLIHTTRFLDGWIDFV 404 (480)
Q Consensus 327 R~VLDVGCGt-G-~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d~~ 404 (480)
.+|.=||+|. | .++..|++.|..++..+.+ ......+...+. ....+..+.+ ...|+|+. ..+++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~--~~~~~~~~~~g~-~~~~~~~~~~----~~aDvvi~-----~vp~~~ 71 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLV--QSAVDGLVAAGA-SAARSARDAV----QGADVVIS-----MLPASQ 71 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSS--HHHHHHHHHTTC-EECSSHHHHH----TTCSEEEE-----CCSCHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCC--HHHHHHHHHCCC-eEcCCHHHHH----hCCCeEEE-----ECCCHH
Confidence 4677889985 3 3677788888888777654 233444444432 1111111111 23576664 233343
Q ss_pred cHHHHHH---HHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCc
Q 046488 405 LLDFILY---DWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKY 447 (480)
Q Consensus 405 ~l~~~L~---EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGf 447 (480)
.+..++. ++...++||..++-.. .......+.+.+.+...|.
T Consensus 72 ~~~~v~~~~~~~~~~l~~~~~vi~~s-t~~~~~~~~l~~~~~~~g~ 116 (302)
T 2h78_A 72 HVEGLYLDDDGLLAHIAPGTLVLECS-TIAPTSARKIHAAARERGL 116 (302)
T ss_dssp HHHHHHHSSSCGGGSSCSSCEEEECS-CCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCchhHHhcCCCCcEEEECC-CCCHHHHHHHHHHHHHcCC
Confidence 3455666 7888899888654322 2222333445555555453
No 408
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=26.46 E-value=1.3e+02 Score=29.46 Aligned_cols=94 Identities=12% Similarity=0.029 Sum_probs=51.0
Q ss_pred cCCCCCCCCeEEEECCC-CcHHHHHHhh-C-CCEEEEEecCCChhHHHHHHHhCCCCeeeeccc-------CCCCCCCcc
Q 046488 319 LDIKPGEIRIGLDFSIG-TGTFAARMRE-F-NVTLVSAIINLGAPFNEMIALRGLVPLYITINQ-------RVPFFDNTL 388 (480)
Q Consensus 319 L~l~~g~iR~VLDVGCG-tG~fAa~Lae-~-gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae-------~LPFpd~SF 388 (480)
.++++|+ +||=+|+| .|.++..+++ . |..++.++.+ +.....+++-+....+...+ ++. ....+
T Consensus 182 ~~~~~g~--~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~---~~~~~~~~~lGa~~vi~~~~~~~~~v~~~~-~g~g~ 255 (359)
T 1h2b_A 182 RTLYPGA--YVAIVGVGGLGHIAVQLLKVMTPATVIALDVK---EEKLKLAERLGADHVVDARRDPVKQVMELT-RGRGV 255 (359)
T ss_dssp TTCCTTC--EEEEECCSHHHHHHHHHHHHHCCCEEEEEESS---HHHHHHHHHTTCSEEEETTSCHHHHHHHHT-TTCCE
T ss_pred cCCCCCC--EEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC---HHHHHHHHHhCCCEEEeccchHHHHHHHHh-CCCCC
Confidence 4566665 78988875 3556666665 4 8888877754 22333344433333332111 111 12368
Q ss_pred chheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 389 DLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 389 DlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
|+|+-.-. ... ...+.+..+. |||++++..
T Consensus 256 Dvvid~~G-----~~~--~~~~~~~~~~--~~G~~v~~g 285 (359)
T 1h2b_A 256 NVAMDFVG-----SQA--TVDYTPYLLG--RMGRLIIVG 285 (359)
T ss_dssp EEEEESSC-----CHH--HHHHGGGGEE--EEEEEEECC
T ss_pred cEEEECCC-----Cch--HHHHHHHhhc--CCCEEEEEe
Confidence 88874321 110 0156666777 999988754
No 409
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=25.85 E-value=27 Score=38.86 Aligned_cols=90 Identities=17% Similarity=0.116 Sum_probs=51.4
Q ss_pred CCCCCCCCeEEEECC--CCcHHHHHHhhC-CCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCC--------CCCcc
Q 046488 320 DIKPGEIRIGLDFSI--GTGTFAARMREF-NVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPF--------FDNTL 388 (480)
Q Consensus 320 ~l~~g~iR~VLDVGC--GtG~fAa~Lae~-gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPF--------pd~SF 388 (480)
++++|+ +||=.|+ |.|..+..+++. |..|+.++.+. .. . ..+-+...... .....| ..+-+
T Consensus 342 ~l~~G~--~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~---k~-~-~l~lga~~v~~-~~~~~~~~~i~~~t~g~Gv 413 (795)
T 3slk_A 342 GLRPGE--SLLVHSAAGGVGMAAIQLARHLGAEVYATASED---KW-Q-AVELSREHLAS-SRTCDFEQQFLGATGGRGV 413 (795)
T ss_dssp CCCTTC--CEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG---GG-G-GSCSCGGGEEC-SSSSTHHHHHHHHSCSSCC
T ss_pred CCCCCC--EEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH---Hh-h-hhhcChhheee-cCChhHHHHHHHHcCCCCe
Confidence 355665 7998884 678888888875 88888776321 10 0 11101111111 111111 23468
Q ss_pred chheecccccCccChhcHHHHHHHHHhcccCCcEEEEee
Q 046488 389 DLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDS 427 (480)
Q Consensus 389 DlV~ss~vL~h~~d~~~l~~~L~EI~RVLKPGG~fiI~~ 427 (480)
|+|+-+-. . . .+.+..++|+|||+|+...
T Consensus 414 DvVld~~g-----g-~----~~~~~l~~l~~~Gr~v~iG 442 (795)
T 3slk_A 414 DVVLNSLA-----G-E----FADASLRMLPRGGRFLELG 442 (795)
T ss_dssp SEEEECCC-----T-T----TTHHHHTSCTTCEEEEECC
T ss_pred EEEEECCC-----c-H----HHHHHHHHhcCCCEEEEec
Confidence 88885321 1 1 4688899999999998763
No 410
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=25.43 E-value=1.4e+02 Score=29.06 Aligned_cols=67 Identities=12% Similarity=0.029 Sum_probs=39.0
Q ss_pred CCeEEEECCCCcHHHHHHhhCCCEE---EEEecCCChhHHHHHHHhC-CCCeeeecccCCCC---C-CCccchheec
Q 046488 326 IRIGLDFSIGTGTFAARMREFNVTL---VSAIINLGAPFNEMIALRG-LVPLYITINQRVPF---F-DNTLDLIHTT 394 (480)
Q Consensus 326 iR~VLDVGCGtG~fAa~Lae~gV~V---v~vd~d~~~~~~~~iA~rg-lip~~~~~ae~LPF---p-d~SFDlV~ss 394 (480)
.-+++|+=||.|.++..+.+.|+.+ .+++.+ ..+.......- ....+.++...+.. + ...+|+++.+
T Consensus 16 ~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d--~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~gg 90 (295)
T 2qrv_A 16 PIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVC--EDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGG 90 (295)
T ss_dssp CEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCC--HHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEEC
T ss_pred CCEEEEeCcCccHHHHHHHHCCCccceEEEEECC--HHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEec
Confidence 3479999999999999999888766 344433 33333332221 12233444333321 1 1368999864
No 411
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=24.70 E-value=2.3e+02 Score=29.67 Aligned_cols=97 Identities=11% Similarity=-0.004 Sum_probs=54.6
Q ss_pred CCCCCeEEEECCCC--cHHHHHHhhCCCEEEEEecCCChh------HHHHHHHhCCCCe--------eeecccCCCCCCC
Q 046488 323 PGEIRIGLDFSIGT--GTFAARMREFNVTLVSAIINLGAP------FNEMIALRGLVPL--------YITINQRVPFFDN 386 (480)
Q Consensus 323 ~g~iR~VLDVGCGt--G~fAa~Lae~gV~Vv~vd~d~~~~------~~~~iA~rglip~--------~~~~ae~LPFpd~ 386 (480)
+..+++|-=||+|+ +.+|..+++.|..|+..+.+.... ......++|.+.. .+.....+. .-.
T Consensus 51 ~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~ 129 (460)
T 3k6j_A 51 AYDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLS 129 (460)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCT
T ss_pred cccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHc
Confidence 34567888899996 457788888899988887653210 1112233443321 001111111 123
Q ss_pred ccchheecccccCcc-ChhcHHHHHHHHHhcccCCcEEEE
Q 046488 387 TLDLIHTTRFLDGWI-DFVLLDFILYDWDRVLRPGGLLWI 425 (480)
Q Consensus 387 SFDlV~ss~vL~h~~-d~~~l~~~L~EI~RVLKPGG~fiI 425 (480)
..|+|+.+ ++ +......++.++..+++||-.++.
T Consensus 130 ~aDlVIeA-----Vpe~~~vk~~v~~~l~~~~~~~aIlas 164 (460)
T 3k6j_A 130 NCDLIVES-----VIEDMKLKKELFANLENICKSTCIFGT 164 (460)
T ss_dssp TCSEEEEC-----CCSCHHHHHHHHHHHHTTSCTTCEEEE
T ss_pred cCCEEEEc-----CCCCHHHHHHHHHHHHhhCCCCCEEEe
Confidence 45766642 22 222224688999999999987653
No 412
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=24.57 E-value=4.4e+02 Score=24.86 Aligned_cols=110 Identities=12% Similarity=0.109 Sum_probs=57.3
Q ss_pred CeEEEECCCC-c-HHHHHHhhCCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCCCCccchheecccccCccChh
Q 046488 327 RIGLDFSIGT-G-TFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFDNTLDLIHTTRFLDGWIDFV 404 (480)
Q Consensus 327 R~VLDVGCGt-G-~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d~~ 404 (480)
.+|.=||+|. | .++..|++.|..|+..+.+ ....+.++..|......+..+. -...|+|+.+ .+++.
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~--~~~~~~~~~~g~~~~~~~~~e~----~~~aDvvi~~-----vp~~~ 76 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLN--PQACANLLAEGACGAAASAREF----AGVVDALVIL-----VVNAA 76 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC--HHHHHHHHHTTCSEEESSSTTT----TTTCSEEEEC-----CSSHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECC--HHHHHHHHHcCCccccCCHHHH----HhcCCEEEEE-----CCCHH
Confidence 4677888885 2 3566777788888777644 2344445554432101111111 1345777742 23333
Q ss_pred cHHHHH---HHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCce
Q 046488 405 LLDFIL---YDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKYK 448 (480)
Q Consensus 405 ~l~~~L---~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGfk 448 (480)
.+..++ .++...|+||..++-.. .......+.+.+.+...|..
T Consensus 77 ~~~~v~~~~~~l~~~l~~g~ivv~~s-t~~~~~~~~~~~~~~~~g~~ 122 (303)
T 3g0o_A 77 QVRQVLFGEDGVAHLMKPGSAVMVSS-TISSADAQEIAAALTALNLN 122 (303)
T ss_dssp HHHHHHC--CCCGGGSCTTCEEEECS-CCCHHHHHHHHHHHHTTTCE
T ss_pred HHHHHHhChhhHHhhCCCCCEEEecC-CCCHHHHHHHHHHHHHcCCe
Confidence 234455 66677888888755322 12223334455555555543
No 413
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=24.13 E-value=3.2e+02 Score=25.88 Aligned_cols=106 Identities=20% Similarity=0.184 Sum_probs=57.2
Q ss_pred eEEEECCCC-c-HHHHHHhhCCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCCCCccchheecccccCccChhc
Q 046488 328 IGLDFSIGT-G-TFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFDNTLDLIHTTRFLDGWIDFVL 405 (480)
Q Consensus 328 ~VLDVGCGt-G-~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d~~~ 405 (480)
+|.=||+|. | .++..|++.|..|+..+.+. ...+.+...+. ....+..+ + -. .|+|+. ..+++..
T Consensus 17 ~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~--~~~~~~~~~g~-~~~~~~~~-~---~~-aDvvi~-----~vp~~~~ 83 (296)
T 3qha_A 17 KLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI--EAMTPLAEAGA-TLADSVAD-V---AA-ADLIHI-----TVLDDAQ 83 (296)
T ss_dssp CEEEECCSTTHHHHHHHHTTSTTCEEEECSST--TTSHHHHHTTC-EECSSHHH-H---TT-SSEEEE-----CCSSHHH
T ss_pred eEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH--HHHHHHHHCCC-EEcCCHHH-H---Hh-CCEEEE-----ECCChHH
Confidence 577889885 3 36777788888887777653 22233444432 11111111 1 12 576664 2344433
Q ss_pred HHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcCc
Q 046488 406 LDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLKY 447 (480)
Q Consensus 406 l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lGf 447 (480)
+..++.++...|+||..++-.. .......+.+.+.+...|.
T Consensus 84 ~~~v~~~l~~~l~~g~ivv~~s-t~~~~~~~~~~~~~~~~g~ 124 (296)
T 3qha_A 84 VREVVGELAGHAKPGTVIAIHS-TISDTTAVELARDLKARDI 124 (296)
T ss_dssp HHHHHHHHHTTCCTTCEEEECS-CCCHHHHHHHHHHHGGGTC
T ss_pred HHHHHHHHHHhcCCCCEEEEeC-CCCHHHHHHHHHHHHHcCC
Confidence 4567889999999988755432 1222333444555555454
No 414
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=22.47 E-value=2.9e+02 Score=28.62 Aligned_cols=97 Identities=13% Similarity=0.061 Sum_probs=51.3
Q ss_pred CeEEEECCCC-c-HHHHHHhhCCCEEEEEecCCChhHHHHHHHhCCCCeee-ec---------ccCCCCCC------Ccc
Q 046488 327 RIGLDFSIGT-G-TFAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYI-TI---------NQRVPFFD------NTL 388 (480)
Q Consensus 327 R~VLDVGCGt-G-~fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rglip~~~-~~---------ae~LPFpd------~SF 388 (480)
.+|.=||+|. | .+|..|++.|..|+.++.+. ...+.+ .++..+.+. +. ..++.+.. ...
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~--~~v~~l-~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~a 85 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ--AKIDIL-NNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHG 85 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH--HHHHHH-HTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHC
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH--HHHHHH-HCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcC
Confidence 4688899995 4 36778888899998887652 222333 333333221 10 01122211 124
Q ss_pred chheecccc----cCccChhcHHHHHHHHHhcccCCcEEEEe
Q 046488 389 DLIHTTRFL----DGWIDFVLLDFILYDWDRVLRPGGLLWID 426 (480)
Q Consensus 389 DlV~ss~vL----~h~~d~~~l~~~L~EI~RVLKPGG~fiI~ 426 (480)
|+|+.+--- ..-.|...+..++.++...|+||-.++..
T Consensus 86 DvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~ 127 (478)
T 2y0c_A 86 DVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDK 127 (478)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred CEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 555532100 00112244577889999999998776543
No 415
>3k1t_A Glutamate--cysteine ligase GSHA; putative gamma-glutamylcysteine synthetase; HET: MSE; 1.90A {Methylobacillus flagellatus KT}
Probab=22.25 E-value=80 Score=33.01 Aligned_cols=48 Identities=23% Similarity=0.484 Sum_probs=36.1
Q ss_pred hhhhhcccccccccc--cccCCcCCcCCcCchhhHHhhHHHHHHHHHHHhhhh
Q 046488 36 SKFYSIRSLLVADAF--CNYNVDLKSEGRNGSQVIRGTVQIVMEKIRKEMSDL 86 (480)
Q Consensus 36 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (480)
.+...+++.|.++-| |.. ..+. ..+|-|.|++.||.+|.||++|-+|-
T Consensus 223 a~~~~IDPWlInp~F~~c~~-vdF~--~~~G~~~La~~Vd~lL~kIr~KY~ey 272 (432)
T 3k1t_A 223 APLIDIDPWLLNPYFDTCGG-LDFH--ARLGEEQLAEKVDSLLAKIRRKYAEY 272 (432)
T ss_dssp HHHHTCCGGGGCCCEEEEEC-CCTT--SSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCcccccHhhhccCC-cccC--ccccHHHHHHHHHHHHHHHHHHHHHh
Confidence 355678888888877 644 2233 34588899999999999999888553
No 416
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=21.32 E-value=4.8e+02 Score=23.91 Aligned_cols=104 Identities=11% Similarity=-0.110 Sum_probs=54.4
Q ss_pred eEEEECCCC-cH-HHHHHhhCCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCCCCccchheecccccCccChhc
Q 046488 328 IGLDFSIGT-GT-FAARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFDNTLDLIHTTRFLDGWIDFVL 405 (480)
Q Consensus 328 ~VLDVGCGt-G~-fAa~Lae~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d~~~ 405 (480)
+|.=||+|. |. ++..|++ |..++..+.+. .....++..|. ... ...+. -...|+|+.. .+.+..
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~--~~~~~~~~~g~-~~~-~~~~~----~~~~D~vi~~-----v~~~~~ 68 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF--EKALRHQEEFG-SEA-VPLER----VAEARVIFTC-----LPTTRE 68 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST--HHHHHHHHHHC-CEE-CCGGG----GGGCSEEEEC-----CSSHHH
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH--HHHHHHHHCCC-ccc-CHHHH----HhCCCEEEEe-----CCChHH
Confidence 466788886 33 5677777 88876665442 33334444432 111 11111 1246777642 233322
Q ss_pred HHHHHHHHHhcccCCcEEEEeeccCChhhHHHHHHHHHHcC
Q 046488 406 LDFILYDWDRVLRPGGLLWIDSFFCAKEDMNDYLEVFKMLK 446 (480)
Q Consensus 406 l~~~L~EI~RVLKPGG~fiI~~f~~~~edL~~~~~~l~~lG 446 (480)
+..++.++...|+||..++... .......+.+.+.+...|
T Consensus 69 ~~~v~~~l~~~l~~~~~vv~~s-~~~~~~~~~l~~~~~~~g 108 (289)
T 2cvz_A 69 VYEVAEALYPYLREGTYWVDAT-SGEPEASRRLAERLREKG 108 (289)
T ss_dssp HHHHHHHHTTTCCTTEEEEECS-CCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhCCCCCEEEECC-CCCHHHHHHHHHHHHHcC
Confidence 3557788888899887755432 122233344555555544
No 417
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=21.02 E-value=1.4e+02 Score=31.48 Aligned_cols=86 Identities=14% Similarity=0.113 Sum_probs=46.1
Q ss_pred CeEEEECCCC-cHHH-HHHhhCCCEEEEEecCCChhHHHHHHHhCCCCeeeecccCCCCCCCccchheecccccCccChh
Q 046488 327 RIGLDFSIGT-GTFA-ARMREFNVTLVSAIINLGAPFNEMIALRGLVPLYITINQRVPFFDNTLDLIHTTRFLDGWIDFV 404 (480)
Q Consensus 327 R~VLDVGCGt-G~fA-a~Lae~gV~Vv~vd~d~~~~~~~~iA~rglip~~~~~ae~LPFpd~SFDlV~ss~vL~h~~d~~ 404 (480)
++|+=+|+|. |... ..+...|..|+.++.+. ....+ +.+-++. .....+.+ ...|+|+..-.-.+
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~--~~~~~-A~~~Ga~-~~~l~e~l----~~aDvVi~atgt~~----- 341 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP--INALQ-AMMEGFD-VVTVEEAI----GDADIVVTATGNKD----- 341 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH--HHHHH-HHHTTCE-ECCHHHHG----GGCSEEEECSSSSC-----
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH--HHHHH-HHHcCCE-EecHHHHH----hCCCEEEECCCCHH-----
Confidence 4899999864 4333 33344588888877652 22223 3332322 11111111 35788876422111
Q ss_pred cHHHHH-HHHHhcccCCcEEEEeecc
Q 046488 405 LLDFIL-YDWDRVLRPGGLLWIDSFF 429 (480)
Q Consensus 405 ~l~~~L-~EI~RVLKPGG~fiI~~f~ 429 (480)
++ .+..+.+||||+++.....
T Consensus 342 ----~i~~~~l~~mk~ggilvnvG~~ 363 (494)
T 3ce6_A 342 ----IIMLEHIKAMKDHAILGNIGHF 363 (494)
T ss_dssp ----SBCHHHHHHSCTTCEEEECSSS
T ss_pred ----HHHHHHHHhcCCCcEEEEeCCC
Confidence 12 2566779999998876544
Done!