BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046493
(679 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 129/207 (62%), Gaps = 4/207 (1%)
Query: 477 GMPTRFSYDDLCKATKNFSTK--LGQGGFGSVYLGMLPDGIQVAVKKL--ESIGQGKKEF 532
G RFS +L A+ NFS K LG+GGFG VY G L DG VAVK+L E G+ +F
Sbjct: 23 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQF 82
Query: 533 SAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRF 592
EV I H +L++L+GFC+ RLL Y Y+ NGS+ + E L W R
Sbjct: 83 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQ 142
Query: 593 NIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT 652
IALG A+GLAYLH+ C+ KI+H D+K N+LLD+ F A V DFGLAKLM+ ++ V
Sbjct: 143 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA 202
Query: 653 LRGTRGYLAPEWITNNPISEKSDVYSY 679
+RGT G++APE+++ SEK+DV+ Y
Sbjct: 203 VRGTIGHIAPEYLSTGKSSEKTDVFGY 229
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 127/207 (61%), Gaps = 4/207 (1%)
Query: 477 GMPTRFSYDDLCKATKNFSTK--LGQGGFGSVYLGMLPDGIQVAVKKL--ESIGQGKKEF 532
G RFS +L A+ NF K LG+GGFG VY G L DG VAVK+L E G+ +F
Sbjct: 15 GQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQF 74
Query: 533 SAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRF 592
EV I H +L++L+GFC+ RLL Y Y+ NGS+ + E L W R
Sbjct: 75 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQ 134
Query: 593 NIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT 652
IALG A+GLAYLH+ C+ KI+H D+K N+LLD+ F A V DFGLAKLM+ ++ V
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA 194
Query: 653 LRGTRGYLAPEWITNNPISEKSDVYSY 679
+RG G++APE+++ SEK+DV+ Y
Sbjct: 195 VRGXIGHIAPEYLSTGKSSEKTDVFGY 221
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 121/203 (59%), Gaps = 7/203 (3%)
Query: 481 RFSYDDLCKATKNFSTK--LGQGGFGSVYLGMLPDGIQVAVKK-LESIGQGKKEFSAEVT 537
R DL +AT NF K +G G FG VY G+L DG +VA+K+ QG +EF E+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 538 TIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALG 597
T+ H HLV L GFC E +L Y+Y+ NG+L + ++ S + +SW R I +G
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKL-MNREESLVYTTLRGT 656
A+GL YLH I+H D+K N+LLD+NF K++DFG++K +++ + ++GT
Sbjct: 148 AARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 657 RGYLAPEWITNNPISEKSDVYSY 679
GY+ PE+ ++EKSDVYS+
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSF 227
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 120/203 (59%), Gaps = 7/203 (3%)
Query: 481 RFSYDDLCKATKNFSTK--LGQGGFGSVYLGMLPDGIQVAVKK-LESIGQGKKEFSAEVT 537
R DL +AT NF K +G G FG VY G+L DG +VA+K+ QG +EF E+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 538 TIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALG 597
T+ H HLV L GFC E +L Y+Y+ NG+L + ++ S + +SW R I +G
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKL-MNREESLVYTTLRGT 656
A+GL YLH I+H D+K N+LLD+NF K++DFG++K ++ + ++GT
Sbjct: 148 AARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 657 RGYLAPEWITNNPISEKSDVYSY 679
GY+ PE+ ++EKSDVYS+
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSF 227
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 122/213 (57%), Gaps = 22/213 (10%)
Query: 482 FSYDDLCKATKNFS--------TKLGQGGFGSVYLGMLPDGIQVAVKKLESI-----GQG 528
FS+ +L T NF K+G+GGFG VY G + + VAVKKL ++ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 529 KKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSL-DKWIFNSTEESRFLS 587
K++F E+ + H +LV+L GF +G L Y Y+ NGSL D+ + + + LS
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR--LSCLDGTPPLS 131
Query: 588 WNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR-EE 646
W+ R IA G A G+ +LHE + H DIK N+LLD+ FTAK+SDFGLA+ + +
Sbjct: 132 WHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 647 SLVYTTLRGTRGYLAPEWITNNPISEKSDVYSY 679
+++ + + GT Y+APE + I+ KSD+YS+
Sbjct: 189 TVMXSRIVGTTAYMAPEALRGE-ITPKSDIYSF 220
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 121/213 (56%), Gaps = 22/213 (10%)
Query: 482 FSYDDLCKATKNFS--------TKLGQGGFGSVYLGMLPDGIQVAVKKLESI-----GQG 528
FS+ +L T NF K+G+GGFG VY G + + VAVKKL ++ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 529 KKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSL-DKWIFNSTEESRFLS 587
K++F E+ + H +LV+L GF +G L Y Y+ NGSL D+ + + + LS
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR--LSCLDGTPPLS 131
Query: 588 WNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR-EE 646
W+ R IA G A G+ +LHE + H DIK N+LLD+ FTAK+SDFGLA+ + +
Sbjct: 132 WHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 647 SLVYTTLRGTRGYLAPEWITNNPISEKSDVYSY 679
+++ + GT Y+APE + I+ KSD+YS+
Sbjct: 189 TVMXXRIVGTTAYMAPEALRGE-ITPKSDIYSF 220
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 120/213 (56%), Gaps = 22/213 (10%)
Query: 482 FSYDDLCKATKNFS--------TKLGQGGFGSVYLGMLPDGIQVAVKKLESI-----GQG 528
FS+ +L T NF K+G+GGFG VY G + + VAVKKL ++ +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 529 KKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSL-DKWIFNSTEESRFLS 587
K++F E+ + H +LV+L GF +G L Y Y+ NGSL D+ + + + LS
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR--LSCLDGTPPLS 125
Query: 588 WNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR-EE 646
W+ R IA G A G+ +LHE + H DIK N+LLD+ FTAK+SDFGLA+ + +
Sbjct: 126 WHMRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQ 182
Query: 647 SLVYTTLRGTRGYLAPEWITNNPISEKSDVYSY 679
++ + GT Y+APE + I+ KSD+YS+
Sbjct: 183 XVMXXRIVGTTAYMAPEALRGE-ITPKSDIYSF 214
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 116/213 (54%), Gaps = 22/213 (10%)
Query: 482 FSYDDLCKATKNFS--------TKLGQGGFGSVYLGMLPDGIQVAVKKLESI-----GQG 528
FS+ +L T NF K G+GGFG VY G + + VAVKKL ++ +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 529 KKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSL-DKWIFNSTEESRFLS 587
K++F E+ H +LV+L GF +G L Y Y NGSL D+ + + + LS
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDR--LSCLDGTPPLS 122
Query: 588 WNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR-EE 646
W+ R IA G A G+ +LHE + H DIK N+LLD+ FTAK+SDFGLA+ + +
Sbjct: 123 WHXRCKIAQGAANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 647 SLVYTTLRGTRGYLAPEWITNNPISEKSDVYSY 679
+ + + GT Y APE + I+ KSD+YS+
Sbjct: 180 XVXXSRIVGTTAYXAPEALRGE-ITPKSDIYSF 211
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 97/190 (51%), Gaps = 7/190 (3%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGIQVAVKKL---ESIGQGKKEFSAEVTTIGNVHHLHLVK 549
N K+G G FG+V+ G VAVK L + + EF EV + + H ++V
Sbjct: 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G + + + EYL GSL + + S + L R ++A +AKG+ YLH
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMNYLHNR- 156
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
IVH D+K N+L+D +T KV DFGL++L L GT ++APE + + P
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL-KASXFLXSKXAAGTPEWMAPEVLRDEP 215
Query: 670 ISEKSDVYSY 679
+EKSDVYS+
Sbjct: 216 SNEKSDVYSF 225
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 7/190 (3%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGIQVAVKKL---ESIGQGKKEFSAEVTTIGNVHHLHLVK 549
N K+G G FG+V+ G VAVK L + + EF EV + + H ++V
Sbjct: 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G + + + EYL GSL + + S + L R ++A +AKG+ YLH
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMNYLHNR- 156
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
IVH ++K N+L+D +T KV DFGL++L L + GT ++APE + + P
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL-KASTFLSSKSAAGTPEWMAPEVLRDEP 215
Query: 670 ISEKSDVYSY 679
+EKSDVYS+
Sbjct: 216 SNEKSDVYSF 225
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 102/190 (53%), Gaps = 12/190 (6%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
F ++G G FG V+LG + +VA+K + +++F E + + H LV+L G
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 72
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
C+E A L +E++ +G L ++ T+ F + T + L + +G+AYL E C
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAA-ETLLGMCLDVCEGMAYLEEAC--- 126
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAPEWITNNP 669
++H D+ N L+ +N KVSDFG+ + + ++ YT+ GT+ + +PE + +
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ---YTSSTGTKFPVKWASPEVFSFSR 183
Query: 670 ISEKSDVYSY 679
S KSDV+S+
Sbjct: 184 YSSKSDVWSF 193
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 102/190 (53%), Gaps = 12/190 (6%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
F ++G G FG V+LG + +VA+K + +++F E + + H LV+L G
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
C+E A L +E++ +G L ++ T+ F + T + L + +G+AYL E C
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAA-ETLLGMCLDVCEGMAYLEEAC--- 123
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAPEWITNNP 669
++H D+ N L+ +N KVSDFG+ + + ++ YT+ GT+ + +PE + +
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ---YTSSTGTKFPVKWASPEVFSFSR 180
Query: 670 ISEKSDVYSY 679
S KSDV+S+
Sbjct: 181 YSSKSDVWSF 190
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 102/190 (53%), Gaps = 12/190 (6%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
F ++G G FG V+LG + +VA+K + +++F E + + H LV+L G
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 67
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
C+E A L +E++ +G L ++ T+ F + T + L + +G+AYL E C
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAA-ETLLGMCLDVCEGMAYLEEAC--- 121
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAPEWITNNP 669
++H D+ N L+ +N KVSDFG+ + + ++ YT+ GT+ + +PE + +
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ---YTSSTGTKFPVKWASPEVFSFSR 178
Query: 670 ISEKSDVYSY 679
S KSDV+S+
Sbjct: 179 YSSKSDVWSF 188
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 102/190 (53%), Gaps = 12/190 (6%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
F ++G G FG V+LG + +VA+K ++ + +F E + + H LV+L G
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYG 89
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
C+E A L +E++ +G L ++ T+ F + T + L + +G+AYL E C
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAA-ETLLGMCLDVCEGMAYLEEAC--- 143
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAPEWITNNP 669
++H D+ N L+ +N KVSDFG+ + + ++ YT+ GT+ + +PE + +
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ---YTSSTGTKFPVKWASPEVFSFSR 200
Query: 670 ISEKSDVYSY 679
S KSDV+S+
Sbjct: 201 YSSKSDVWSF 210
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 101/190 (53%), Gaps = 12/190 (6%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
F ++G G FG V+LG + +VA+K + +++F E + + H LV+L G
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 70
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
C+E A L E++ +G L ++ T+ F + T + L + +G+AYL E C
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYL--RTQRGLFAA-ETLLGMCLDVCEGMAYLEEAC--- 124
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAPEWITNNP 669
++H D+ N L+ +N KVSDFG+ + + ++ YT+ GT+ + +PE + +
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ---YTSSTGTKFPVKWASPEVFSFSR 181
Query: 670 ISEKSDVYSY 679
S KSDV+S+
Sbjct: 182 YSSKSDVWSF 191
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 101/190 (53%), Gaps = 12/190 (6%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
F ++G G FG V+LG + +VA+K + +++F E + + H LV+L G
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
C+E A L +E++ +G L ++ T+ F + T + L + +G+AYL E
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAA-ETLLGMCLDVCEGMAYLE---EAS 123
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAPEWITNNP 669
++H D+ N L+ +N KVSDFG+ + + ++ YT+ GT+ + +PE + +
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ---YTSSTGTKFPVKWASPEVFSFSR 180
Query: 670 ISEKSDVYSY 679
S KSDV+S+
Sbjct: 181 YSSKSDVWSF 190
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + T +LG G FG V++G +VAVK L+ F AE + + H
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 74
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L + ++ EY+ NGSL F T L+ N ++A +A+G+A++
Sbjct: 75 RLVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 131
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
E +H D++ N+L+ D + K++DFGLA+L+ E YT G + + AP
Sbjct: 132 EER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAP 185
Query: 663 EWITNNPISEKSDVYSY 679
E I + KSDV+S+
Sbjct: 186 EAINYGTFTIKSDVWSF 202
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + T +LG G FG V++G +VAVK L+ F AE + + H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L + ++ EY+ NGSL F T L+ N ++A +A+G+A++
Sbjct: 69 RLVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
E +H D++ N+L+ D + K++DFGLA+L+ E YT G + + AP
Sbjct: 126 EER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAP 179
Query: 663 EWITNNPISEKSDVYSY 679
E I + KSDV+S+
Sbjct: 180 EAINYGTFTIKSDVWSF 196
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + T +LG G FG V++G +VAVK L+ F AE + + H
Sbjct: 14 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 73
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L + ++ EY+ NGSL F T L+ N ++A +A+G+A++
Sbjct: 74 RLVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 130
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
E +H D++ N+L+ D + K++DFGLA+L+ E YT G + + AP
Sbjct: 131 EER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAP 184
Query: 663 EWITNNPISEKSDVYSY 679
E I + KSDV+S+
Sbjct: 185 EAINYGTFTIKSDVWSF 201
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + T +LG G FG V++G +VAVK L+ F AE + + H
Sbjct: 19 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 78
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L + ++ EY+ NGSL F T L+ N ++A +A+G+A++
Sbjct: 79 RLVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 135
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
E +H D++ N+L+ D + K++DFGLA+L+ E YT G + + AP
Sbjct: 136 EER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAP 189
Query: 663 EWITNNPISEKSDVYSY 679
E I + KSDV+S+
Sbjct: 190 EAINYGTFTIKSDVWSF 206
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + T +LG G FG V++G +VAVK L+ F AE + + H
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 63
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L + ++ EY+ NGSL F T L+ N ++A +A+G+A++
Sbjct: 64 RLVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 120
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
E +H D++ N+L+ D + K++DFGLA+L+ E YT G + + AP
Sbjct: 121 EER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAP 174
Query: 663 EWITNNPISEKSDVYSY 679
E I + KSDV+S+
Sbjct: 175 EAINYGTFTIKSDVWSF 191
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + T +LG G FG V++G +VAVK L+ F AE + + H
Sbjct: 11 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 70
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L + ++ EY+ NGSL F T L+ N ++A +A+G+A++
Sbjct: 71 RLVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 127
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
E +H D++ N+L+ D + K++DFGLA+L+ E + + APE I
Sbjct: 128 EER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI 184
Query: 666 TNNPISEKSDVYSY 679
+ KSDV+S+
Sbjct: 185 NYGTFTIKSDVWSF 198
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + T +LG G FG V++G +VAVK L+ F AE + + H
Sbjct: 10 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 69
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L + ++ EY+ NGSL F T L+ N ++A +A+G+A++
Sbjct: 70 RLVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 126
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
E +H D++ N+L+ D + K++DFGLA+L+ E + + APE I
Sbjct: 127 EER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI 183
Query: 666 TNNPISEKSDVYSY 679
+ KSDV+S+
Sbjct: 184 NYGTFTIKSDVWSF 197
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + T +LG G FG V++G +VAVK L+ F AE + + H
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 74
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L + ++ EY+ NGSL F T L+ N ++A +A+G+A++
Sbjct: 75 RLVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 131
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
E +H D++ N+L+ D + K++DFGLA+L+ E + + APE I
Sbjct: 132 EER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI 188
Query: 666 TNNPISEKSDVYSY 679
+ KSDV+S+
Sbjct: 189 NYGTFTIKSDVWSF 202
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + T +LG G FG V++G +VAVK L+ F AE + + H
Sbjct: 18 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 77
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L + ++ EY+ NGSL F T L+ N ++A +A+G+A++
Sbjct: 78 RLVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 134
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
E +H D++ N+L+ D + K++DFGLA+L+ E + + APE I
Sbjct: 135 EER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI 191
Query: 666 TNNPISEKSDVYSY 679
+ KSDV+S+
Sbjct: 192 NYGTFTIKSDVWSF 205
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + T +LG G FG V++G +VAVK L+ F AE + + H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L + ++ EY+ NGSL F T L+ N ++A +A+G+A++
Sbjct: 69 RLVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
E +H D++ N+L+ D + K++DFGLA+L+ E + + APE I
Sbjct: 126 EER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI 182
Query: 666 TNNPISEKSDVYSY 679
+ KSDV+S+
Sbjct: 183 NYGTFTIKSDVWSF 196
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + T +LG G FG V++G +VAVK L+ F AE + + H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L + ++ EY+ NGSL F T L+ N ++A +A+G+A++
Sbjct: 69 RLVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
E +H D++ N+L+ D + K++DFGLA+L+ E + + APE I
Sbjct: 126 EER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI 182
Query: 666 TNNPISEKSDVYSY 679
+ KSDV+S+
Sbjct: 183 NYGTFTIKSDVWSF 196
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + T +LG G FG V++G +VAVK L+ F AE + + H
Sbjct: 17 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 76
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L + ++ EY+ NGSL F T L+ N ++A +A+G+A++
Sbjct: 77 RLVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 133
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
E +H D++ N+L+ D + K++DFGLA+L+ E + + APE I
Sbjct: 134 EER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI 190
Query: 666 TNNPISEKSDVYSY 679
+ KSDV+S+
Sbjct: 191 NYGTFTIKSDVWSF 204
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 15/191 (7%)
Query: 498 LGQGGFGSVYLGMLPDG-----IQVAVKKLES--IGQGKKEFSAEVTTIGNVHHLHLVKL 550
+G G FG VY GML + VA+K L++ + + +F E +G H ++++L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
+G + ++ EY+ NG+LDK++ E L + G+A G+ YL
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQL---VGMLRGIAAGMKYL---AN 165
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRG--YLAPEWITNN 668
+ VH D+ N+L++ N KVSDFGL++++ + YTT G + APE I+
Sbjct: 166 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR 225
Query: 669 PISEKSDVYSY 679
+ SDV+S+
Sbjct: 226 KFTSASDVWSF 236
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 25/216 (11%)
Query: 483 SYDDLCKATKNFSTKL-----------GQGGFGSVYLGML----PDGIQVAVKKLES--I 525
+Y++ +A ++F+ ++ G G G V G L + VA+K L++
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
+ +++F +E + +G H ++++L+G G ++ EY+ NGSLD F T + +F
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT--FLRTHDGQF 148
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNRE 645
+ G+ G+ YL ++ VH D+ NVL+D N KVSDFGL++++ +
Sbjct: 149 TIMQL-VGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
Query: 646 ESLVYTTLRGTRG--YLAPEWITNNPISEKSDVYSY 679
YTT G + APE I S SDV+S+
Sbjct: 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSF 240
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + T +LG G FG V++G +VAVK L+ F AE + + H
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 64
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L + ++ EY+ NGSL F T L+ N ++A +A+G+A++
Sbjct: 65 RLVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 121
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
E +H +++ N+L+ D + K++DFGLA+L+ E YT G + + AP
Sbjct: 122 EER---NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAP 175
Query: 663 EWITNNPISEKSDVYSY 679
E I + KSDV+S+
Sbjct: 176 EAINYGTFTIKSDVWSF 192
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 114/240 (47%), Gaps = 30/240 (12%)
Query: 463 QEDLEEDNFLEKISGMPTRF---SYDDLCKATKNFSTKL-----------GQGGFGSVYL 508
QE EE F K G T +Y+D +A F+ +L G G FG V
Sbjct: 2 QEGDEELYFHFKFPGTKTYIDPETYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCS 61
Query: 509 GMLP----DGIQVAVKKLESIG---QGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRL 561
G L + VA+K L+ +G + +++F E + +G H ++V L+G G +
Sbjct: 62 GRLKLPGKRDVAVAIKTLK-VGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVM 120
Query: 562 LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPE 621
+ E++ NG+LD F + +F + G+A G+ YL ++ VH D+
Sbjct: 121 IVIEFMENGALDA--FLRKHDGQFTVIQL-VGMLRGIAAGMRYL---ADMGYVHRDLAAR 174
Query: 622 NVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRG--TRGYLAPEWITNNPISEKSDVYSY 679
N+L++ N KVSDFGL++++ + VYTT G + APE I + SDV+SY
Sbjct: 175 NILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSY 234
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + KLGQG FG V++G +VA+K L+ + F E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHE 73
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L E ++ EY+ GSL F E ++L ++A +A G+AY+
Sbjct: 74 KLVQLYAVVSEEPIYIVT-EYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
+ VH D++ N+L+ +N KV+DFGLA+L+ E YT +G + + AP
Sbjct: 131 ER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAP 184
Query: 663 EWITNNPISEKSDVYSY 679
E + KSDV+S+
Sbjct: 185 EAALYGRFTIKSDVWSF 201
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + KLGQG FG V++G +VA+K L+ + F E + + H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L E ++ EY+ GSL F E ++L ++A +A G+AY+
Sbjct: 240 KLVQLYAVVSEEPIYIVT-EYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
+ VH D++ N+L+ +N KV+DFGLA+L+ E YT +G + + AP
Sbjct: 297 ER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAP 350
Query: 663 EWITNNPISEKSDVYSY 679
E + KSDV+S+
Sbjct: 351 EAALYGRFTIKSDVWSF 367
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 6/194 (3%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + T +LG G G V++G +VAVK L+ F AE + + H
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L + ++ EY+ NGSL F T L+ N ++A +A+G+A++
Sbjct: 69 RLVRLYAVVTQEPIYIIT-EYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
E +H D++ N+L+ D + K++DFGLA+L+ E + + APE I
Sbjct: 126 EER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAI 182
Query: 666 TNNPISEKSDVYSY 679
+ KSDV+S+
Sbjct: 183 NYGTFTIKSDVWSF 196
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 18/192 (9%)
Query: 498 LGQGGFGSVYLGMLP----DGIQVAVKKLESIG---QGKKEFSAEVTTIGNVHHLHLVKL 550
+G G FG V G L I VA+K L+ +G + +++F E + +G H ++++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
+G + ++ EY+ NGSLD ++ + + + G+A G+ YL +
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL---VGMLRGIASGMKYL---SD 165
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAPEWITN 667
+ VH D+ N+L++ N KVSDFGLA+++ + YTT RG + + +PE I
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTT-RGGKIPIRWTSPEAIAY 224
Query: 668 NPISEKSDVYSY 679
+ SDV+SY
Sbjct: 225 RKFTSASDVWSY 236
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + KLGQG FG V++G +VA+K L+ + F E + + H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L E ++ EY+ GSL F E ++L ++A +A G+AY+
Sbjct: 240 KLVQLYAVVSEEPIYIVT-EYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
+ VH D++ N+L+ +N KV+DFGLA+L+ E YT +G + + AP
Sbjct: 297 ER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAP 350
Query: 663 EWITNNPISEKSDVYSY 679
E + KSDV+S+
Sbjct: 351 EAALYGRFTIKSDVWSF 367
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + KLGQG FG V++G +VA+K L+ + F E + + H
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 66
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L E ++ EY+ GSL F E ++L ++A +A G+AY+
Sbjct: 67 KLVQLYAVVSEEPIYIVT-EYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYV 123
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
+ VH D++ N+L+ +N KV+DFGLA+L+ E YT +G + + AP
Sbjct: 124 ER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAP 177
Query: 663 EWITNNPISEKSDVYSY 679
E + KSDV+S+
Sbjct: 178 EAALYGRFTIKSDVWSF 194
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + KLGQG FG V++G +VA+K L+ + F E + + H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 239
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L E ++ EY+ GSL F E ++L ++A +A G+AY+
Sbjct: 240 KLVQLYAVVSEEPIYIVG-EYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
+ VH D++ N+L+ +N KV+DFGLA+L+ E YT +G + + AP
Sbjct: 297 ER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAP 350
Query: 663 EWITNNPISEKSDVYSY 679
E + KSDV+S+
Sbjct: 351 EAALYGRFTIKSDVWSF 367
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + KLGQG FG V++G +VA+K L+ + F E + + H
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 62
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L E ++ EY+ GSL F E ++L ++A +A G+AY+
Sbjct: 63 KLVQLYAVVSEEPIYIVT-EYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYV 119
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
+ VH D++ N+L+ +N KV+DFGLA+L+ E YT +G + + AP
Sbjct: 120 ER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAP 173
Query: 663 EWITNNPISEKSDVYSY 679
E + KSDV+S+
Sbjct: 174 EAALYGRFTIKSDVWSF 190
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 29/218 (13%)
Query: 483 SYDDLCKATKNFSTKL-----------GQGGFGSVYLGMLP----DGIQVAVKKLESIG- 526
+Y+D + F+ +L G G FG V G L I VA+K L+ +G
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGY 85
Query: 527 --QGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESR 584
+ +++F E + +G H ++++L+G + ++ EY+ NGSLD ++ +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 585 FLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR 644
+ + G+A G+ YL ++ VH D+ N+L++ N KVSDFGL++++
Sbjct: 146 VIQL---VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 645 EESLVYTTLRGTR---GYLAPEWITNNPISEKSDVYSY 679
+ YTT RG + + +PE I + SDV+SY
Sbjct: 200 DPEAAYTT-RGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + KLGQG FG V++G +VA+K L+ + F E + + H
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 64
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L E ++ EY+ GSL F E ++L ++A +A G+AY+
Sbjct: 65 KLVQLYAVVSEEPIYIVT-EYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYV 121
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
+ VH D++ N+L+ +N KV+DFGLA+L+ E YT +G + + AP
Sbjct: 122 ER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAP 175
Query: 663 EWITNNPISEKSDVYSY 679
E + KSDV+S+
Sbjct: 176 EAALYGRFTIKSDVWSF 192
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 29/218 (13%)
Query: 483 SYDDLCKATKNFSTKL-----------GQGGFGSVYLGMLP----DGIQVAVKKLESIG- 526
+Y+D + F+ +L G G FG V G L I VA+K L+ +G
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGY 85
Query: 527 --QGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESR 584
+ +++F E + +G H ++++L+G + ++ EY+ NGSLD ++ +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 585 FLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR 644
+ + G+A G+ YL ++ VH D+ N+L++ N KVSDFGL++++
Sbjct: 146 VIQL---VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 645 EESLVYTTLRGTR---GYLAPEWITNNPISEKSDVYSY 679
+ YTT RG + + +PE I + SDV+SY
Sbjct: 200 DPEAAYTT-RGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 27/218 (12%)
Query: 482 FSYDDLCKATKNFSTKL-----------GQGGFGSVYLGMLP----DGIQVAVKKLES-- 524
F+++D +A + F+ ++ G G FG V G L I VA+K L++
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 525 IGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESR 584
+ +++F +E + +G H +++ L+G + ++ EY+ NGSLD F + R
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA--FLRKNDGR 127
Query: 585 FLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR 644
F + G+ G+ YL + + VH D+ N+L++ N KVSDFG+++++
Sbjct: 128 FTVIQL-VGMLRGIGSGMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLED 183
Query: 645 EESLVYTTLRGTR---GYLAPEWITNNPISEKSDVYSY 679
+ YTT RG + + APE I + SDV+SY
Sbjct: 184 DPEAAYTT-RGGKIPIRWTAPEAIAYRKFTSASDVWSY 220
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 107/218 (49%), Gaps = 29/218 (13%)
Query: 483 SYDDLCKATKNFSTKL-----------GQGGFGSVYLGMLP----DGIQVAVKKLESIG- 526
+Y+D + F+ +L G G FG V G L I VA+K L+ +G
Sbjct: 25 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGY 83
Query: 527 --QGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESR 584
+ +++F E + +G H ++++L+G + ++ EY+ NGSLD ++ +
Sbjct: 84 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 143
Query: 585 FLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR 644
+ + G+A G+ YL ++ VH D+ N+L++ N KVSDFGL++++
Sbjct: 144 VIQL---VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 197
Query: 645 EESLVYTTLRGTR---GYLAPEWITNNPISEKSDVYSY 679
+ YTT RG + + +PE I + SDV+SY
Sbjct: 198 DPEAAYTT-RGGKIPIRWTSPEAIAYRKFTSASDVWSY 234
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 99/192 (51%), Gaps = 18/192 (9%)
Query: 498 LGQGGFGSVYLGMLP----DGIQVAVKKLESIG---QGKKEFSAEVTTIGNVHHLHLVKL 550
+G G FG V G L I VA+K L+ +G + +++F E + +G H ++++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
+G + ++ EY+ NGSLD ++ + + + G+A G+ YL +
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL---VGMLRGIASGMKYL---SD 165
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAPEWITN 667
+ VH D+ N+L++ N KVSDFGL++++ + YTT RG + + +PE I
Sbjct: 166 MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKIPIRWTSPEAIAY 224
Query: 668 NPISEKSDVYSY 679
+ SDV+SY
Sbjct: 225 RKFTSASDVWSY 236
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 6/194 (3%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + KLGQG FG V++G +VA+K L+ + F E + + H
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 63
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L E ++ EY+ GSL F E ++L ++A +A G+AY+
Sbjct: 64 KLVQLYAVVSEEPIXIVT-EYMSKGSLLD--FLKGETGKYLRLPQLVDMAAQIASGMAYV 120
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+ VH D++ N+L+ +N KV+DFGLA+L+ E + + APE
Sbjct: 121 ER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAA 177
Query: 666 TNNPISEKSDVYSY 679
+ KSDV+S+
Sbjct: 178 LYGRFTIKSDVWSF 191
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + KLGQG FG V++G +VA+K L+ + F E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L E ++ EY+ GSL F E ++L ++A +A G+AY+
Sbjct: 74 KLVQLYAVVSEEPIYIVT-EYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
+ VH D++ N+L+ +N KV+DFGLA+L+ E YT +G + + AP
Sbjct: 131 ER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAP 184
Query: 663 EWITNNPISEKSDVYSY 679
E + KSDV+S+
Sbjct: 185 EAALYGRFTIKSDVWSF 201
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + KLGQG FG V++G +VA+K L+ + F E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L E ++ EY+ GSL F E ++L ++A +A G+AY+
Sbjct: 74 KLVQLYAVVSEEPIYIVC-EYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
+ VH D++ N+L+ +N KV+DFGLA+L+ E YT +G + + AP
Sbjct: 131 ER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAP 184
Query: 663 EWITNNPISEKSDVYSY 679
E + KSDV+S+
Sbjct: 185 EAALYGRFTIKSDVWSF 201
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 100/192 (52%), Gaps = 18/192 (9%)
Query: 498 LGQGGFGSVYLGMLP----DGIQVAVKKLESIG---QGKKEFSAEVTTIGNVHHLHLVKL 550
+G G FG V G L I VA+K L+ +G + +++F E + +G H ++++L
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
+G + ++ EY+ NGSLD F +++F + G+A G+ YL +
Sbjct: 83 EGVVTKSKPVMIVTEYMENGSLDS--FLRKHDAQFTVIQL-VGMLRGIASGMKYL---SD 136
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAPEWITN 667
+ VH D+ N+L++ N KVSDFGL++++ + YTT RG + + +PE I
Sbjct: 137 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKIPIRWTSPEAIAY 195
Query: 668 NPISEKSDVYSY 679
+ SDV+SY
Sbjct: 196 RKFTSASDVWSY 207
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + KLGQG FG V++G +VA+K L+ + F E + + H
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 322
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L E ++ EY+ GSL F E ++L ++A +A G+AY+
Sbjct: 323 KLVQLYAVVSEEPIYIVT-EYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYV 379
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
+ VH D++ N+L+ +N KV+DFGLA+L+ E YT +G + + AP
Sbjct: 380 ER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAP 433
Query: 663 EWITNNPISEKSDVYSY 679
E + KSDV+S+
Sbjct: 434 EAALYGRFTIKSDVWSF 450
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + KLGQG FG V++G +VA+K L+ + F E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L E ++ EY+ GSL F E ++L ++A +A G+AY+
Sbjct: 74 KLVQLYAVVSEEPIYIVI-EYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
+ VH D++ N+L+ +N KV+DFGLA+L+ E YT +G + + AP
Sbjct: 131 ER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAP 184
Query: 663 EWITNNPISEKSDVYSY 679
E + KSDV+S+
Sbjct: 185 EAALYGRFTIKSDVWSF 201
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 100/192 (52%), Gaps = 18/192 (9%)
Query: 498 LGQGGFGSVYLGMLP----DGIQVAVKKLESIG---QGKKEFSAEVTTIGNVHHLHLVKL 550
+G G FG V G L I VA+K L+ +G + +++F E + +G H ++++L
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNIIRL 99
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
+G + ++ EY+ NGSLD F +++F + G+A G+ YL +
Sbjct: 100 EGVVTKSKPVMIVTEYMENGSLDS--FLRKHDAQFTVIQL-VGMLRGIASGMKYL---SD 153
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAPEWITN 667
+ VH D+ N+L++ N KVSDFGL++++ + YTT RG + + +PE I
Sbjct: 154 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKIPIRWTSPEAIAY 212
Query: 668 NPISEKSDVYSY 679
+ SDV+SY
Sbjct: 213 RKFTSASDVWSY 224
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 25/216 (11%)
Query: 483 SYDDLCKATKNFSTKL-----------GQGGFGSVYLGML----PDGIQVAVKKLES--I 525
+Y++ +A ++F+ ++ G G G V G L + VA+K L++
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYT 90
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
+ +++F +E + +G H ++++L+G G ++ EY+ NGSLD F T + +F
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT--FLRTHDGQF 148
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNRE 645
+ G+ G+ YL ++ VH D+ NVL+D N KVSDFGL++++ +
Sbjct: 149 TIMQL-VGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
Query: 646 ESLVYTTLRGTRG--YLAPEWITNNPISEKSDVYSY 679
TT G + APE I S SDV+S+
Sbjct: 205 PDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSF 240
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 99/192 (51%), Gaps = 18/192 (9%)
Query: 498 LGQGGFGSVYLGMLP----DGIQVAVKKLESIG---QGKKEFSAEVTTIGNVHHLHLVKL 550
+G G FG V G L I VA+K L+ +G + +++F E + +G H ++++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
+G + ++ EY+ NGSLD ++ + + + G+A G+ YL +
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL---VGMLRGIASGMKYL---SD 165
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAPEWITN 667
+ VH D+ N+L++ N KVSDFGL++++ + YTT RG + + +PE I
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKIPIRWTSPEAIAY 224
Query: 668 NPISEKSDVYSY 679
+ SDV+SY
Sbjct: 225 RKFTSASDVWSY 236
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 99/192 (51%), Gaps = 18/192 (9%)
Query: 498 LGQGGFGSVYLGMLP----DGIQVAVKKLESIG---QGKKEFSAEVTTIGNVHHLHLVKL 550
+G G FG V G L I VA+K L+ +G + +++F E + +G H ++++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
+G + ++ EY+ NGSLD ++ + + + G+A G+ YL +
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL---VGMLRGIASGMKYL---SD 165
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAPEWITN 667
+ VH D+ N+L++ N KVSDFGL++++ + YTT RG + + +PE I
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKIPIRWTSPEAIAY 224
Query: 668 NPISEKSDVYSY 679
+ SDV+SY
Sbjct: 225 RKFTSASDVWSY 236
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 18/192 (9%)
Query: 498 LGQGGFGSVYLGMLP----DGIQVAVKKLESIG---QGKKEFSAEVTTIGNVHHLHLVKL 550
+G G FG V G L I VA+K L+ +G + +++F E + +G H ++++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
+G + ++ EY+ NGSLD ++ + + + G+A G+ YL +
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL---VGMLRGIASGMKYL---SD 165
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAPEWITN 667
+ VH D+ N+L++ N KVSDFGL +++ + YTT RG + + +PE I
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT-RGGKIPIRWTSPEAIAY 224
Query: 668 NPISEKSDVYSY 679
+ SDV+SY
Sbjct: 225 RKFTSASDVWSY 236
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + KLGQG FG V++G +VA+K L+ + F E + + H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 70
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L E ++ EY+ GSL F E ++L +++ +A G+AY+
Sbjct: 71 KLVQLYAVVSEEPIYIVT-EYMNKGSLLD--FLKGETGKYLRLPQLVDMSAQIASGMAYV 127
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
+ VH D++ N+L+ +N KV+DFGLA+L+ E YT +G + + AP
Sbjct: 128 ER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAP 181
Query: 663 EWITNNPISEKSDVYSY 679
E + KSDV+S+
Sbjct: 182 EAALYGRFTIKSDVWSF 198
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + KLGQG FG V++G +VA+K L+ + F E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L E ++ EY+ GSL F E ++L ++A +A G+AY+
Sbjct: 74 KLVQLYAVVSEEPIYIVT-EYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
+ VH D+ N+L+ +N KV+DFGLA+L+ E YT +G + + AP
Sbjct: 131 ER---MNYVHRDLAAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAP 184
Query: 663 EWITNNPISEKSDVYSY 679
E + KSDV+S+
Sbjct: 185 EAALYGRFTIKSDVWSF 201
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 6/194 (3%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + KLGQG FG V++G +VA+K L+ + F E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L E ++ EY+ GSL F E ++L ++A +A G+AY+
Sbjct: 74 KLVQLYAVVSEEPIYIVI-EYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+ VH D++ N+L+ +N KV+DFGLA+L+ E + + APE
Sbjct: 131 ER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAA 187
Query: 666 TNNPISEKSDVYSY 679
+ KSDV+S+
Sbjct: 188 LYGRFTIKSDVWSF 201
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + KLGQG FG V++G +VA+K L+ + F E + + H
Sbjct: 181 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHE 240
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L E ++ EY+ GSL F E ++L ++A +A G+AY+
Sbjct: 241 KLVQLYAVVSEEPIYIVT-EYMSKGSLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYV 297
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
+ VH D++ N+L+ +N KV+DFGL +L+ E YT +G + + AP
Sbjct: 298 E---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNE---YTARQGAKFPIKWTAP 351
Query: 663 EWITNNPISEKSDVYSY 679
E + KSDV+S+
Sbjct: 352 EAALYGRFTIKSDVWSF 368
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 34/209 (16%)
Query: 494 FSTKLGQGGFGSVYLG----MLP--DGIQVAVKKLESIGQ-GKKEFSAEVTTIGNVHHLH 546
+LG+G FG V+L + P D I VAVK L+ +K+F E + N+ H H
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF---------LSWNTRFNIALG 597
+VK G C+EG ++ +EY+ +G L+K++ ++ L+ + +IA
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
+A G+ YL + VH D+ N L+ +N K+ DFG M+R+ VY+T
Sbjct: 137 IAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFG----MSRD---VYSTDYYRV 186
Query: 658 G--------YLAPEWITNNPISEKSDVYS 678
G ++ PE I + +SDV+S
Sbjct: 187 GGHTMLPIRWMPPESIMYRKFTTESDVWS 215
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 22/195 (11%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKL-----ESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
+G GGFG VY G +VAVK E I Q + E + H +++ L+G
Sbjct: 15 IGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
C++ + L E+ G L N + + + N A+ +A+G+ YLH+E V
Sbjct: 74 VCLKEPNLCLVMEFARGGPL-----NRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVP 128
Query: 613 IVHCDIKPENVLLDD--------NFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
I+H D+K N+L+ N K++DFGLA+ +R + + G ++APE
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM---SAAGAYAWMAPEV 185
Query: 665 ITNNPISEKSDVYSY 679
I + S+ SDV+SY
Sbjct: 186 IRASMFSKGSDVWSY 200
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + KLGQG FG V++G +VA+K L+ + F E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L E ++ EY+ G L F E ++L ++A +A G+AY+
Sbjct: 74 KLVQLYAVVSEEPIYIVT-EYMSKGCLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
+ VH D++ N+L+ +N KV+DFGLA+L+ E YT +G + + AP
Sbjct: 131 ER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAP 184
Query: 663 EWITNNPISEKSDVYSY 679
E + KSDV+S+
Sbjct: 185 EAALYGRFTIKSDVWSF 201
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + KLGQG FG V++G +VA+K L+ + F E + + H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 73
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L E ++ EY+ G L F E ++L ++A +A G+AY+
Sbjct: 74 KLVQLYAVVSEEPIYIVM-EYMSKGCLLD--FLKGEMGKYLRLPQLVDMAAQIASGMAYV 130
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
+ VH D++ N+L+ +N KV+DFGLA+L+ E YT +G + + AP
Sbjct: 131 ER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---YTARQGAKFPIKWTAP 184
Query: 663 EWITNNPISEKSDVYSY 679
E + KSDV+S+
Sbjct: 185 EAALYGRFTIKSDVWSF 201
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + KLGQG FG V++G +VA+K L+ + F E + + H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE 70
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L E ++ EY+ GSL F E ++L +++ +A G+AY+
Sbjct: 71 KLVQLYAVVSEEPIYIVT-EYMNKGSLLD--FLKGETGKYLRLPQLVDMSAQIASGMAYV 127
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
+ VH D++ N+L+ +N KV+DFGLA+L+ E +T +G + + AP
Sbjct: 128 ER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---WTARQGAKFPIKWTAP 181
Query: 663 EWITNNPISEKSDVYSY 679
E + KSDV+S+
Sbjct: 182 EAALYGRFTIKSDVWSF 198
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 29/218 (13%)
Query: 483 SYDDLCKATKNFSTKL-----------GQGGFGSVYLGMLP----DGIQVAVKKLESIG- 526
+Y+D + F+ +L G G FG V G L I VA+K L+ +G
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGY 85
Query: 527 --QGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESR 584
+ +++F E + +G H ++++L+G + ++ E + NGSLD ++ +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFT 145
Query: 585 FLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR 644
+ + G+A G+ YL ++ VH D+ N+L++ N KVSDFGL++++
Sbjct: 146 VIQL---VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 645 EESLVYTTLRGTR---GYLAPEWITNNPISEKSDVYSY 679
+ YTT RG + + +PE I + SDV+SY
Sbjct: 200 DPEAAYTT-RGGKIPIRWTSPEAIAYRKFTSASDVWSY 236
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 16/191 (8%)
Query: 498 LGQGGFGSVYLGMLP----DGIQVAVKKLES--IGQGKKEFSAEVTTIGNVHHLHLVKLK 551
+G G FG V G L I VA+K L++ + +++F +E + +G H +++ L+
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
G + ++ EY+ NGSLD F + RF + G+ G+ YL + +
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDA--FLRKNDGRFTVIQL-VGMLRGIGSGMKYLSD---M 135
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAPEWITNN 668
VH D+ N+L++ N KVSDFG+++++ + YTT RG + + APE I
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT-RGGKIPIRWTAPEAIAYR 194
Query: 669 PISEKSDVYSY 679
+ SDV+SY
Sbjct: 195 KFTSASDVWSY 205
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 16/191 (8%)
Query: 498 LGQGGFGSVYLGMLP----DGIQVAVKKLES--IGQGKKEFSAEVTTIGNVHHLHLVKLK 551
+G G FG V G L I VA+K L++ + +++F +E + +G H +++ L+
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
G + ++ EY+ NGSLD F + RF + G+ G+ YL + +
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDA--FLRKNDGRFTVIQL-VGMLRGIGSGMKYLSD---M 129
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAPEWITNN 668
VH D+ N+L++ N KVSDFG+++++ + YTT RG + + APE I
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT-RGGKIPIRWTAPEAIAYR 188
Query: 669 PISEKSDVYSY 679
+ SDV+SY
Sbjct: 189 KFTSASDVWSY 199
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 18/192 (9%)
Query: 498 LGQGGFGSVYLGMLP----DGIQVAVKKLESIG---QGKKEFSAEVTTIGNVHHLHLVKL 550
+G G FG V G L I VA+K L+ +G + +++F E + +G H ++++L
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
+G + ++ E + NGSLD F +++F + G+A G+ YL +
Sbjct: 83 EGVVTKSKPVMIVTEXMENGSLDS--FLRKHDAQFTVIQL-VGMLRGIASGMKYL---SD 136
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAPEWITN 667
+ VH D+ N+L++ N KVSDFGL++++ + YTT RG + + +PE I
Sbjct: 137 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKIPIRWTSPEAIAY 195
Query: 668 NPISEKSDVYSY 679
+ SDV+SY
Sbjct: 196 RKFTSASDVWSY 207
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 98/192 (51%), Gaps = 18/192 (9%)
Query: 498 LGQGGFGSVYLGMLP----DGIQVAVKKLESIG---QGKKEFSAEVTTIGNVHHLHLVKL 550
+G G FG V G L I VA+K L+ +G + +++F E + +G H ++++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
+G + ++ E + NGSLD ++ + + + G+A G+ YL +
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL---VGMLRGIASGMKYL---SD 165
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAPEWITN 667
+ VH D+ N+L++ N KVSDFGL++++ + YTT RG + + +PE I
Sbjct: 166 MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKIPIRWTSPEAIAY 224
Query: 668 NPISEKSDVYSY 679
+ SDV+SY
Sbjct: 225 RKFTSASDVWSY 236
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 109/219 (49%), Gaps = 27/219 (12%)
Query: 482 FSYDDLCKATKNFSTKL-----------GQGGFGSVYLGMLP----DGIQVAVKKLES-- 524
F+++D +A + F+ ++ G G FG V G L I VA+K L+S
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 525 IGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESR 584
+ +++F +E + +G H +++ L+G + ++ E++ NGSLD ++ + +
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 585 FLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR 644
+ + G+A G+ YL ++ VH D+ N+L++ N KVSDFGL++ +
Sbjct: 134 VIQL---VGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED 187
Query: 645 EES-LVYTTLRGTR---GYLAPEWITNNPISEKSDVYSY 679
+ S YT+ G + + APE I + SDV+SY
Sbjct: 188 DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSY 226
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 97/190 (51%), Gaps = 18/190 (9%)
Query: 497 KLGQGGFGSVYLG---MLPDGIQVAVKKLESIGQGKKE----FSAEVTTIGNVHHLHLVK 549
KLG GG +VYL +L I+VA+K + + K+E F EV + H ++V
Sbjct: 18 KLGGGGMSTVYLAEDTIL--NIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
+ E L EY+ +L ++I E LS +T N + G+ + H+
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYI----ESHGPLSVDTAINFTNQILDGIKHAHD-- 129
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITNN 668
++IVH DIKP+N+L+D N T K+ DFG+AK ++ E SL T + GT Y +PE
Sbjct: 130 -MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS-ETSLTQTNHVLGTVQYFSPEQAKGE 187
Query: 669 PISEKSDVYS 678
E +D+YS
Sbjct: 188 ATDECTDIYS 197
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 29/218 (13%)
Query: 483 SYDDLCKATKNFSTKL-----------GQGGFGSVYLGMLP----DGIQVAVKKLESIG- 526
+Y+D +A F+ ++ G G FG V G L + VA+K L+ +G
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLK-VGY 62
Query: 527 --QGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESR 584
+ +++F E + +G H +++ L+G + ++ EY+ NGSLD ++ + +
Sbjct: 63 TEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFT 122
Query: 585 FLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR 644
+ + G++ G+ YL ++ VH D+ N+L++ N KVSDFGL++++
Sbjct: 123 VIQL---VGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED 176
Query: 645 EESLVYTTLRGTR---GYLAPEWITNNPISEKSDVYSY 679
+ YTT RG + + APE I + SDV+SY
Sbjct: 177 DPEAAYTT-RGGKIPIRWTAPEAIAFRKFTSASDVWSY 213
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 100/193 (51%), Gaps = 16/193 (8%)
Query: 494 FSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSA---EVTTIGNVHHLHLVKL 550
ST++G G FG+VY G VAVK L+ + ++F A EV + H++++
Sbjct: 40 LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLF 97
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
G+ + ++ ++ SL K + +E++F + +IA A+G+ YLH +
Sbjct: 98 MGYMTKDNLAIVT-QWCEGSSLYKHL--HVQETKFQMFQL-IDIARQTAQGMDYLHAK-- 151
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR-EESLVYTTLRGTRGYLAPEWIT--- 666
I+H D+K N+ L + T K+ DFGLA + +R S G+ ++APE I
Sbjct: 152 -NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQD 210
Query: 667 NNPISEKSDVYSY 679
NNP S +SDVYSY
Sbjct: 211 NNPFSFQSDVYSY 223
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 18/198 (9%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNVHHLH 546
+F+ +G+G FG VY G L D I AVK L I + +F E + + H +
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 547 LVKLKGFCI--EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAY 604
++ L G C+ EG+ L+ Y+ +G L +I N T + L +AKG+ Y
Sbjct: 92 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKY 147
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLA 661
L + K VH D+ N +LD+ FT KV+DFGLA+ M +E G + ++A
Sbjct: 148 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 662 PEWITNNPISEKSDVYSY 679
E + + KSDV+S+
Sbjct: 205 LESLQTQKFTTKSDVWSF 222
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 105/220 (47%), Gaps = 22/220 (10%)
Query: 479 PTRFSYDDLCKATKN---FSTKLGQGGFGSVY------LGMLPDGIQVAVKKLESIGQG- 528
PT+ Y++ + +N F LG G FG V LG ++VAVK L+S
Sbjct: 24 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 83
Query: 529 -KKEFSAEVTTIGNV-HHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTE----- 581
K+ +E+ + ++ H ++V L G C G L+ EY G L ++ E
Sbjct: 84 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDK 143
Query: 582 -ESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAK 640
+ R L + + +A+G+A+L + +H D+ NVLL + AK+ DFGLA+
Sbjct: 144 EDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLAR 200
Query: 641 -LMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYSY 679
+MN +V R ++APE I + + +SDV+SY
Sbjct: 201 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 240
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 18/198 (9%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNVHHLH 546
+F+ +G+G FG VY G L D I AVK L I + +F E + + H +
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 547 LVKLKGFCI--EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAY 604
++ L G C+ EG+ L+ Y+ +G L +I N T + L +AKG+ Y
Sbjct: 85 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKY 140
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLA 661
L + K VH D+ N +LD+ FT KV+DFGLA+ M +E G + ++A
Sbjct: 141 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 662 PEWITNNPISEKSDVYSY 679
E + + KSDV+S+
Sbjct: 198 LESLQTQKFTTKSDVWSF 215
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 18/198 (9%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNVHHLH 546
+F+ +G+G FG VY G L D I AVK L I + +F E + + H +
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 547 LVKLKGFCI--EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAY 604
++ L G C+ EG+ L+ Y+ +G L +I N T + L +AKG+ Y
Sbjct: 93 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKY 148
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLA 661
L + K VH D+ N +LD+ FT KV+DFGLA+ M +E G + ++A
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 662 PEWITNNPISEKSDVYSY 679
E + + KSDV+S+
Sbjct: 206 LESLQTQKFTTKSDVWSF 223
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 18/198 (9%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNVHHLH 546
+F+ +G+G FG VY G L D I AVK L I + +F E + + H +
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 547 LVKLKGFCI--EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAY 604
++ L G C+ EG+ L+ Y+ +G L +I N T + L +AKG+ Y
Sbjct: 92 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKY 147
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLA 661
L + K VH D+ N +LD+ FT KV+DFGLA+ M +E G + ++A
Sbjct: 148 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 662 PEWITNNPISEKSDVYSY 679
E + + KSDV+S+
Sbjct: 205 LESLQTQKFTTKSDVWSF 222
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 18/198 (9%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNVHHLH 546
+F+ +G+G FG VY G L D I AVK L I + +F E + + H +
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 547 LVKLKGFCI--EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAY 604
++ L G C+ EG+ L+ Y+ +G L +I N T + L +AKG+ Y
Sbjct: 91 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKY 146
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLA 661
L + K VH D+ N +LD+ FT KV+DFGLA+ M +E G + ++A
Sbjct: 147 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 662 PEWITNNPISEKSDVYSY 679
E + + KSDV+S+
Sbjct: 204 LESLQTQKFTTKSDVWSF 221
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 18/198 (9%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNVHHLH 546
+F+ +G+G FG VY G L D I AVK L I + +F E + + H +
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 547 LVKLKGFCI--EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAY 604
++ L G C+ EG+ L+ Y+ +G L +I N T + L +AKG+ Y
Sbjct: 93 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKY 148
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLA 661
L + K VH D+ N +LD+ FT KV+DFGLA+ M +E G + ++A
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 662 PEWITNNPISEKSDVYSY 679
E + + KSDV+S+
Sbjct: 206 LESLQTQKFTTKSDVWSF 223
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 18/198 (9%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNVHHLH 546
+F+ +G+G FG VY G L D I AVK L I + +F E + + H +
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 547 LVKLKGFCI--EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAY 604
++ L G C+ EG+ L+ Y+ +G L +I N T + L +AKG+ Y
Sbjct: 112 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKY 167
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLA 661
L + K VH D+ N +LD+ FT KV+DFGLA+ M +E G + ++A
Sbjct: 168 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 662 PEWITNNPISEKSDVYSY 679
E + + KSDV+S+
Sbjct: 225 LESLQTQKFTTKSDVWSF 242
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 105/220 (47%), Gaps = 22/220 (10%)
Query: 479 PTRFSYDDLCKATKN---FSTKLGQGGFGSVY------LGMLPDGIQVAVKKLESIGQG- 528
PT+ Y++ + +N F LG G FG V LG ++VAVK L+S
Sbjct: 32 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 529 -KKEFSAEVTTIGNV-HHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTE----- 581
K+ +E+ + ++ H ++V L G C G L+ EY G L ++ E
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDK 151
Query: 582 -ESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAK 640
+ R L + + +A+G+A+L + +H D+ NVLL + AK+ DFGLA+
Sbjct: 152 EDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLAR 208
Query: 641 -LMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYSY 679
+MN +V R ++APE I + + +SDV+SY
Sbjct: 209 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 248
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 18/198 (9%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNVHHLH 546
+F+ +G+G FG VY G L D I AVK L I + +F E + + H +
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 547 LVKLKGFCI--EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAY 604
++ L G C+ EG+ L+ Y+ +G L +I N T + L +AKG+ Y
Sbjct: 111 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKY 166
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLA 661
L + K VH D+ N +LD+ FT KV+DFGLA+ M +E G + ++A
Sbjct: 167 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 662 PEWITNNPISEKSDVYSY 679
E + + KSDV+S+
Sbjct: 224 LESLQTQKFTTKSDVWSF 241
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 18/198 (9%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNVHHLH 546
+F+ +G+G FG VY G L D I AVK L I + +F E + + H +
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 547 LVKLKGFCI--EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAY 604
++ L G C+ EG+ L+ Y+ +G L +I N T + L +AKG+ Y
Sbjct: 90 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKY 145
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLA 661
L + K VH D+ N +LD+ FT KV+DFGLA+ M +E G + ++A
Sbjct: 146 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 662 PEWITNNPISEKSDVYSY 679
E + + KSDV+S+
Sbjct: 203 LESLQTQKFTTKSDVWSF 220
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 18/198 (9%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNVHHLH 546
+F+ +G+G FG VY G L D I AVK L I + +F E + + H +
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 547 LVKLKGFCI--EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAY 604
++ L G C+ EG+ L+ Y+ +G L +I N T + L +AKG+ Y
Sbjct: 88 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKY 143
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLA 661
L + K VH D+ N +LD+ FT KV+DFGLA+ M +E G + ++A
Sbjct: 144 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 662 PEWITNNPISEKSDVYSY 679
E + + KSDV+S+
Sbjct: 201 LESLQTQKFTTKSDVWSF 218
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 103/224 (45%), Gaps = 26/224 (11%)
Query: 479 PTRFSYDDLCKATKN---FSTKLGQGGFGSVY------LGMLPDGIQVAVKKLESIGQG- 528
PT+ Y++ + +N F LG G FG V LG ++VAVK L+S
Sbjct: 32 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 529 -KKEFSAEVTTIGNV-HHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFL 586
K+ +E+ + ++ H ++V L G C G L+ EY G L ++ +SR L
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL---RRKSRVL 148
Query: 587 SWNTRFNIALGMAKGLAYLHEECEVK----------IVHCDIKPENVLLDDNFTAKVSDF 636
+ F IA A LH +V +H D+ NVLL + AK+ DF
Sbjct: 149 ETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDF 208
Query: 637 GLAK-LMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYSY 679
GLA+ +MN +V R ++APE I + + +SDV+SY
Sbjct: 209 GLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 252
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 107/227 (47%), Gaps = 32/227 (14%)
Query: 479 PTRFSYDDLCKATKN---FSTKLGQGGFGSVY------LGMLPDGIQVAVKKLESIGQG- 528
PT+ Y++ + +N F LG G FG V LG ++VAVK L+S
Sbjct: 32 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 529 -KKEFSAEVTTIGNV-HHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFL 586
K+ +E+ + ++ H ++V L G C G L+ EY G L ++ +SR L
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL---RRKSRVL 148
Query: 587 SWNTRFNIALG-------------MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKV 633
+ F IA +A+G+A+L + +H D+ NVLL + AK+
Sbjct: 149 ETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKI 205
Query: 634 SDFGLAK-LMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYSY 679
DFGLA+ +MN +V R ++APE I + + +SDV+SY
Sbjct: 206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 252
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 17/191 (8%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKL-ESIG-QGKKEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K L E+ G + EF E + ++ H HLV+L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
G C+ +L+ + + +G L +++ E + N + +AKG+ YL E
Sbjct: 83 LGVCLSPTIQLVT-QLMPHGCLLEYVH---EHKDNIGSQLLLNWCVQIAKGMMYLEER-- 136
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRG--YLAPEWITNN 668
++VH D+ NVL+ K++DFGLA+L+ +E Y G ++A E I
Sbjct: 137 -RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK-EYNADGGKMPIKWMALECIHYR 194
Query: 669 PISEKSDVYSY 679
+ +SDV+SY
Sbjct: 195 KFTHQSDVWSY 205
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 6/184 (3%)
Query: 497 KLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCI 555
KLG G +G VY+G+ + VAVK L+ +EF E + + H +LV+L G C
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 556 EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVH 615
+ EY+ G+L ++ E ++ +A ++ + YL ++ +H
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREE--VTAVVLLYMATQISSAMEYLEKK---NFIH 153
Query: 616 CDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSD 675
D+ N L+ +N KV+DFGL++LM + + + + APE + N S KSD
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSD 213
Query: 676 VYSY 679
V+++
Sbjct: 214 VWAF 217
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYL---GMLPD--GIQVAVKKLE-SIGQGKKEF 532
PT+F L F +LG+G FGSV + L D G VAVKKL+ S + ++F
Sbjct: 4 PTQFEERHL-----KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 58
Query: 533 SAEVTTIGNVHHLHLVKLKGFCIEGAHR--LLAYEYLGNGSLDKWIFNSTEES---RFLS 587
E+ + ++ H ++VK KG C R L EYL GSL ++ E + L
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 118
Query: 588 WNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREES 647
+ ++ + KG+ YL + + +H D+ N+L+++ K+ DFGL K++ +++
Sbjct: 119 YTSQ------ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
Query: 648 LVYTTLRGTRG--YLAPEWITNNPISEKSDVYSY 679
G + APE +T + S SDV+S+
Sbjct: 170 FFKVKEPGESPIFWYAPESLTESKFSVASDVWSF 203
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 18/198 (9%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNVHHLH 546
+F+ +G+G FG VY G L D I AVK L I + +F E + + H +
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 547 LVKLKGFCI--EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAY 604
++ L G C+ EG+ L+ Y+ +G L +I N T + L +AKG+ +
Sbjct: 94 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKF 149
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAK-LMNREESLVY--TTLRGTRGYLA 661
L + K VH D+ N +LD+ FT KV+DFGLA+ ++++E V+ T + ++A
Sbjct: 150 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 662 PEWITNNPISEKSDVYSY 679
E + + KSDV+S+
Sbjct: 207 LESLQTQKFTTKSDVWSF 224
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 100/191 (52%), Gaps = 17/191 (8%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKL-ESIG-QGKKEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K L E+ G + EF E + ++ H HLV+L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
G C+ +L+ + + +G L +++ E + N + +AKG+ YL E
Sbjct: 106 LGVCLSPTIQLVT-QLMPHGCLLEYVH---EHKDNIGSQLLLNWCVQIAKGMMYLEER-- 159
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRG--YLAPEWITNN 668
++VH D+ NVL+ K++DFGLA+L+ +E Y G ++A E I
Sbjct: 160 -RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK-EYNADGGKMPIKWMALECIHYR 217
Query: 669 PISEKSDVYSY 679
+ +SDV+SY
Sbjct: 218 KFTHQSDVWSY 228
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + +LG G FG V++G + +VAVK L+ + F E + + H
Sbjct: 9 EIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD 68
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L + EY+ GSL F ++E + + + +A+G+AY+
Sbjct: 69 KLVRLYAVVTREEPIYIITEYMAKGSLLD--FLKSDEGGKVLLPKLIDFSAQIAEGMAYI 126
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
+ +H D++ NVL+ ++ K++DFGLA+++ E YT G + + AP
Sbjct: 127 ERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE---YTAREGAKFPIKWTAP 180
Query: 663 EWITNNPISEKSDVYSY 679
E I + KSDV+S+
Sbjct: 181 EAINFGCFTIKSDVWSF 197
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYL---GMLPD--GIQVAVKKLE-SIGQGKKEF 532
PT+F L F +LG+G FGSV + L D G VAVKKL+ S + ++F
Sbjct: 35 PTQFEERHL-----KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 89
Query: 533 SAEVTTIGNVHHLHLVKLKGFCIEGAHR--LLAYEYLGNGSLDKWIFNSTEES---RFLS 587
E+ + ++ H ++VK KG C R L EYL GSL ++ E + L
Sbjct: 90 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 149
Query: 588 WNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREES 647
+ ++ + KG+ YL + + +H D+ N+L+++ K+ DFGL K++ +++
Sbjct: 150 YTSQ------ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 200
Query: 648 LVYTTLRGTRG--YLAPEWITNNPISEKSDVYSY 679
G + APE +T + S SDV+S+
Sbjct: 201 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 234
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 24/203 (11%)
Query: 497 KLGQGGFGSVYLG----MLP--DGIQVAVKKL-ESIGQGKKEFSAEVTTIGNVHHLHLVK 549
+LG+G FG V+L +LP D + VAVK L E+ +++F E + + H H+V+
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLS-----------WNTRFNIALGM 598
G C EG L+ +EY+ +G L++++ + +++ L+ +A +
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 599 AKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREE--SLVYTTLRGT 656
A G+ YL + VH D+ N L+ K+ DFG+++ + + + T+
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 657 RGYLAPEWITNNPISEKSDVYSY 679
R ++ PE I + +SDV+S+
Sbjct: 202 R-WMPPESILYRKFTTESDVWSF 223
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYL---GMLPD--GIQVAVKKLE-SIGQGKKEF 532
PT+F L F +LG+G FGSV + L D G VAVKKL+ S + ++F
Sbjct: 8 PTQFEERHL-----KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 62
Query: 533 SAEVTTIGNVHHLHLVKLKGFCIEGAHR--LLAYEYLGNGSLDKWIFNSTEES---RFLS 587
E+ + ++ H ++VK KG C R L EYL GSL ++ E + L
Sbjct: 63 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 122
Query: 588 WNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREES 647
+ ++ + KG+ YL + + +H D+ N+L+++ K+ DFGL K++ +++
Sbjct: 123 YTSQ------ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 173
Query: 648 LVYTTLRGTRG--YLAPEWITNNPISEKSDVYSY 679
G + APE +T + S SDV+S+
Sbjct: 174 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 207
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYL---GMLPD--GIQVAVKKLE-SIGQGKKEF 532
PT+F L F +LG+G FGSV + L D G VAVKKL+ S + ++F
Sbjct: 2 PTQFEERHL-----KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 56
Query: 533 SAEVTTIGNVHHLHLVKLKGFCIEGAHR--LLAYEYLGNGSLDKWIFNSTEES---RFLS 587
E+ + ++ H ++VK KG C R L EYL GSL ++ E + L
Sbjct: 57 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 116
Query: 588 WNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREES 647
+ ++ + KG+ YL + + +H D+ N+L+++ K+ DFGL K++ +++
Sbjct: 117 YTSQ------ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 167
Query: 648 LVYTTLRGTRG--YLAPEWITNNPISEKSDVYSY 679
G + APE +T + S SDV+S+
Sbjct: 168 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 201
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYL---GMLPD--GIQVAVKKLE-SIGQGKKEF 532
PT+F L F +LG+G FGSV + L D G VAVKKL+ S + ++F
Sbjct: 10 PTQFEERHL-----KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 64
Query: 533 SAEVTTIGNVHHLHLVKLKGFCIEGAHR--LLAYEYLGNGSLDKWIFNSTEES---RFLS 587
E+ + ++ H ++VK KG C R L EYL GSL ++ E + L
Sbjct: 65 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 124
Query: 588 WNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREES 647
+ ++ + KG+ YL + + +H D+ N+L+++ K+ DFGL K++ +++
Sbjct: 125 YTSQ------ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 175
Query: 648 LVYTTLRGTRG--YLAPEWITNNPISEKSDVYSY 679
G + APE +T + S SDV+S+
Sbjct: 176 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 209
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYL---GMLPD--GIQVAVKKLE-SIGQGKKEF 532
PT+F L F +LG+G FGSV + L D G VAVKKL+ S + ++F
Sbjct: 3 PTQFEERHL-----KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 57
Query: 533 SAEVTTIGNVHHLHLVKLKGFCIEGAHR--LLAYEYLGNGSLDKWIFNSTEES---RFLS 587
E+ + ++ H ++VK KG C R L EYL GSL ++ E + L
Sbjct: 58 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 117
Query: 588 WNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREES 647
+ ++ + KG+ YL + + +H D+ N+L+++ K+ DFGL K++ +++
Sbjct: 118 YTSQ------ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 168
Query: 648 LVYTTLRGTRG--YLAPEWITNNPISEKSDVYSY 679
G + APE +T + S SDV+S+
Sbjct: 169 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 202
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 18/190 (9%)
Query: 497 KLGQGGFG-SVYLGMLPDGIQVAVKKL---ESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
K+G+G FG ++ + DG Q +K++ + ++E EV + N+ H ++V+ +
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNST----EESRFLSWNTRFNIALGMAKGLAYLHEE 608
E + +Y G L K I +E + L W + +AL ++H+
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL------KHVHDR 144
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNN 668
KI+H DIK +N+ L + T ++ DFG+A+++N L + GT YL+PE N
Sbjct: 145 ---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACI-GTPYYLSPEICENK 200
Query: 669 PISEKSDVYS 678
P + KSD+++
Sbjct: 201 PYNNKSDIWA 210
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYL---GMLPD--GIQVAVKKLE-SIGQGKKEF 532
PT+F L F +LG+G FGSV + L D G VAVKKL+ S + ++F
Sbjct: 11 PTQFEERHL-----KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 65
Query: 533 SAEVTTIGNVHHLHLVKLKGFCIEGAHR--LLAYEYLGNGSLDKWIFNSTEES---RFLS 587
E+ + ++ H ++VK KG C R L EYL GSL ++ E + L
Sbjct: 66 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 125
Query: 588 WNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREES 647
+ ++ + KG+ YL + + +H D+ N+L+++ K+ DFGL K++ +++
Sbjct: 126 YTSQ------ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 176
Query: 648 LVYTTLRGTRG--YLAPEWITNNPISEKSDVYSY 679
G + APE +T + S SDV+S+
Sbjct: 177 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 210
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYL---GMLPD--GIQVAVKKLE-SIGQGKKEF 532
PT+F L F +LG+G FGSV + L D G VAVKKL+ S + ++F
Sbjct: 9 PTQFEERHL-----KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 63
Query: 533 SAEVTTIGNVHHLHLVKLKGFCIEGAHR--LLAYEYLGNGSLDKWIFNSTEES---RFLS 587
E+ + ++ H ++VK KG C R L EYL GSL ++ E + L
Sbjct: 64 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 123
Query: 588 WNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREES 647
+ ++ + KG+ YL + + +H D+ N+L+++ K+ DFGL K++ +++
Sbjct: 124 YTSQ------ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 174
Query: 648 LVYTTLRGTRG--YLAPEWITNNPISEKSDVYSY 679
G + APE +T + S SDV+S+
Sbjct: 175 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 208
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 90/193 (46%), Gaps = 18/193 (9%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
F +LG G FG V G VA+K ++ + EF E + N+ H LV+L G
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIA--LGMAKGLAYLHEECE 610
C + + EY+ NG L N E R RF L M K + E E
Sbjct: 72 VCTKQRPIFIITEYMANGCL----LNYLREMRH-----RFQTQQLLEMCKDVCEAMEYLE 122
Query: 611 VK-IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAPEWIT 666
K +H D+ N L++D KVSDFGL++ + +E YT+ RG++ + PE +
Sbjct: 123 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSRGSKFPVRWSPPEVLM 179
Query: 667 NNPISEKSDVYSY 679
+ S KSD++++
Sbjct: 180 YSKFSSKSDIWAF 192
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYL---GMLPD--GIQVAVKKLE-SIGQGKKEF 532
PT+F L F +LG+G FGSV + L D G VAVKKL+ S + ++F
Sbjct: 4 PTQFEERHL-----KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 58
Query: 533 SAEVTTIGNVHHLHLVKLKGFCIEGAHR--LLAYEYLGNGSLDKWIFNSTEES---RFLS 587
E+ + ++ H ++VK KG C R L EYL GSL ++ E + L
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 118
Query: 588 WNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREES 647
+ ++ + KG+ YL + + +H D+ N+L+++ K+ DFGL K++ +++
Sbjct: 119 YTSQ------ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
Query: 648 LVYTTLRGTRG--YLAPEWITNNPISEKSDVYSY 679
G + APE +T + S SDV+S+
Sbjct: 170 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 203
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYL---GMLPD--GIQVAVKKLE-SIGQGKKEF 532
PT+F L F +LG+G FGSV + L D G VAVKKL+ S + ++F
Sbjct: 4 PTQFEERHL-----KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 58
Query: 533 SAEVTTIGNVHHLHLVKLKGFCIEGAHR--LLAYEYLGNGSLDKWIFNSTEES---RFLS 587
E+ + ++ H ++VK KG C R L EYL GSL ++ E + L
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 118
Query: 588 WNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREES 647
+ ++ + KG+ YL + + +H D+ N+L+++ K+ DFGL K++ +++
Sbjct: 119 YTSQ------ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
Query: 648 LVYTTLRGTRG--YLAPEWITNNPISEKSDVYSY 679
G + APE +T + S SDV+S+
Sbjct: 170 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 203
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 100/198 (50%), Gaps = 18/198 (9%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNVHHLH 546
+F+ +G+G FG VY G L D I AVK L I + +F E + + H +
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 547 LVKLKGFCI--EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAY 604
++ L G C+ EG+ L+ Y+ +G L +I N T + L +AKG+ +
Sbjct: 91 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKF 146
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM-NREESLVY--TTLRGTRGYLA 661
L + K VH D+ N +LD+ FT KV+DFGLA+ M ++E V+ T + ++A
Sbjct: 147 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 662 PEWITNNPISEKSDVYSY 679
E + + KSDV+S+
Sbjct: 204 LESLQTQKFTTKSDVWSF 221
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 24/203 (11%)
Query: 497 KLGQGGFGSVYLG----MLP--DGIQVAVKKL-ESIGQGKKEFSAEVTTIGNVHHLHLVK 549
+LG+G FG V+L +LP D + VAVK L E+ +++F E + + H H+V+
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLS-----------WNTRFNIALGM 598
G C EG L+ +EY+ +G L++++ + +++ L+ +A +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 599 AKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREE--SLVYTTLRGT 656
A G+ YL + VH D+ N L+ K+ DFG+++ + + + T+
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 657 RGYLAPEWITNNPISEKSDVYSY 679
R ++ PE I + +SDV+S+
Sbjct: 225 R-WMPPESILYRKFTTESDVWSF 246
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 100/198 (50%), Gaps = 18/198 (9%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNVHHLH 546
+F+ +G+G FG VY G L D I AVK L I + +F E + + H +
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 547 LVKLKGFCI--EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAY 604
++ L G C+ EG+ L+ Y+ +G L +I N T + L +AKG+ +
Sbjct: 93 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKF 148
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM-NREESLVY--TTLRGTRGYLA 661
L + K VH D+ N +LD+ FT KV+DFGLA+ M ++E V+ T + ++A
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 662 PEWITNNPISEKSDVYSY 679
E + + KSDV+S+
Sbjct: 206 LESLQTQKFTTKSDVWSF 223
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 24/203 (11%)
Query: 497 KLGQGGFGSVYLG----MLP--DGIQVAVKKL-ESIGQGKKEFSAEVTTIGNVHHLHLVK 549
+LG+G FG V+L +LP D + VAVK L E+ +++F E + + H H+V+
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLS-----------WNTRFNIALGM 598
G C EG L+ +EY+ +G L++++ + +++ L+ +A +
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 599 AKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREE--SLVYTTLRGT 656
A G+ YL + VH D+ N L+ K+ DFG+++ + + + T+
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 657 RGYLAPEWITNNPISEKSDVYSY 679
R ++ PE I + +SDV+S+
Sbjct: 196 R-WMPPESILYRKFTTESDVWSF 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYL---GMLPD--GIQVAVKKLE-SIGQGKKEF 532
PT+F L F +LG+G FGSV + L D G VAVKKL+ S + ++F
Sbjct: 7 PTQFEERHL-----KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 533 SAEVTTIGNVHHLHLVKLKGFCIEGAHR--LLAYEYLGNGSLDKWIFNSTEES---RFLS 587
E+ + ++ H ++VK KG C R L EYL GSL ++ E + L
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 121
Query: 588 WNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREES 647
+ ++ + KG+ YL + + +H D+ N+L+++ K+ DFGL K++ +++
Sbjct: 122 YTSQ------ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
Query: 648 LVYTTLRGTRG--YLAPEWITNNPISEKSDVYSY 679
G + APE +T + S SDV+S+
Sbjct: 173 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 206
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 100/198 (50%), Gaps = 18/198 (9%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNVHHLH 546
+F+ +G+G FG VY G L D I AVK L I + +F E + + H +
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 547 LVKLKGFCI--EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAY 604
++ L G C+ EG+ L+ Y+ +G L +I N T + L +AKG+ +
Sbjct: 98 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKF 153
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM-NREESLVY--TTLRGTRGYLA 661
L + K VH D+ N +LD+ FT KV+DFGLA+ M ++E V+ T + ++A
Sbjct: 154 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 662 PEWITNNPISEKSDVYSY 679
E + + KSDV+S+
Sbjct: 211 LESLQTQKFTTKSDVWSF 228
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 100/198 (50%), Gaps = 18/198 (9%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNVHHLH 546
+F+ +G+G FG VY G L D I AVK L I + +F E + + H +
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 547 LVKLKGFCI--EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAY 604
++ L G C+ EG+ L+ Y+ +G L +I N T + L +AKG+ +
Sbjct: 94 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKF 149
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM-NREESLVY--TTLRGTRGYLA 661
L + K VH D+ N +LD+ FT KV+DFGLA+ M ++E V+ T + ++A
Sbjct: 150 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 662 PEWITNNPISEKSDVYSY 679
E + + KSDV+S+
Sbjct: 207 LESLQTQKFTTKSDVWSF 224
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGKKEFSA---EVTTIGNVHHLHLVK 549
LG G FG+V+ G+ +P+G I V +K +E G++ F A + IG++ H H+V+
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIED-KSGRQSFQAVTDHMLAIGSLDHAHIVR 79
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESR-FLSWNTRFNIALGMAKGLAYLHEE 608
L G C G+ L +YL GSL + + R L N + +AKG+ YL E
Sbjct: 80 LLGLC-PGSSLQLVTQYLPLGSL----LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH 134
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREE-SLVYTTLRGTRGYLAPEWITN 667
+VH ++ NVLL +V+DFG+A L+ ++ L+Y+ + ++A E I
Sbjct: 135 G---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF 191
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 192 GKYTHQSDVWSY 203
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYL---GMLPD--GIQVAVKKLE-SIGQGKKEF 532
PT+F L F +LG+G FGSV + L D G VAVKKL+ S + ++F
Sbjct: 7 PTQFEERHL-----KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 533 SAEVTTIGNVHHLHLVKLKGFCIEGAHR--LLAYEYLGNGSLDKWIFNSTEES---RFLS 587
E+ + ++ H ++VK KG C R L EYL GSL ++ E + L
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQ 121
Query: 588 WNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREES 647
+ ++ + KG+ YL + + +H D+ N+L+++ K+ DFGL K++ +++
Sbjct: 122 YTSQ------ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
Query: 648 LVYTTLRGTRG--YLAPEWITNNPISEKSDVYSY 679
G + APE +T + S SDV+S+
Sbjct: 173 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 206
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 100/198 (50%), Gaps = 18/198 (9%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNVHHLH 546
+F+ +G+G FG VY G L D I AVK L I + +F E + + H +
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 547 LVKLKGFCI--EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAY 604
++ L G C+ EG+ L+ Y+ +G L +I N T + L +AKG+ +
Sbjct: 93 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKF 148
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM-NREESLVY--TTLRGTRGYLA 661
L + K VH D+ N +LD+ FT KV+DFGLA+ M ++E V+ T + ++A
Sbjct: 149 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 662 PEWITNNPISEKSDVYSY 679
E + + KSDV+S+
Sbjct: 206 LESLQTQKFTTKSDVWSF 223
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGKKEFSA---EVTTIGNVHHLHLVK 549
LG G FG+V+ G+ +P+G I V +K +E G++ F A + IG++ H H+V+
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIED-KSGRQSFQAVTDHMLAIGSLDHAHIVR 97
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESR-FLSWNTRFNIALGMAKGLAYLHEE 608
L G C G+ L +YL GSL + + R L N + +AKG+ YL E
Sbjct: 98 LLGLC-PGSSLQLVTQYLPLGSL----LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH 152
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREE-SLVYTTLRGTRGYLAPEWITN 667
+VH ++ NVLL +V+DFG+A L+ ++ L+Y+ + ++A E I
Sbjct: 153 G---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHF 209
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 210 GKYTHQSDVWSY 221
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 100/198 (50%), Gaps = 18/198 (9%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNVHHLH 546
+F+ +G+G FG VY G L D I AVK L I + +F E + + H +
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 547 LVKLKGFCI--EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAY 604
++ L G C+ EG+ L+ Y+ +G L +I N T + L +AKG+ +
Sbjct: 152 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFGLQVAKGMKF 207
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM-NREESLVY--TTLRGTRGYLA 661
L + K VH D+ N +LD+ FT KV+DFGLA+ M ++E V+ T + ++A
Sbjct: 208 LASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 662 PEWITNNPISEKSDVYSY 679
E + + KSDV+S+
Sbjct: 265 LESLQTQKFTTKSDVWSF 282
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 16/192 (8%)
Query: 498 LGQGGFGSVYLGML--PDGIQ--VAVKKLES--IGQGKKEFSAEVTTIGNVHHLHLVKLK 551
+G G FG V G L P + VA+K L+ + ++EF +E + +G H ++++L+
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
G ++ E++ NG+LD F + +F + G+A G+ YL E+
Sbjct: 82 GVVTNSMPVMILTEFMENGALDS--FLRLNDGQFTVIQL-VGMLRGIASGMRYL---AEM 135
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREES-LVYTTLRGTR---GYLAPEWITN 667
VH D+ N+L++ N KVSDFGL++ + S YT+ G + + APE I
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAF 195
Query: 668 NPISEKSDVYSY 679
+ SD +SY
Sbjct: 196 RKFTSASDAWSY 207
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 97/192 (50%), Gaps = 16/192 (8%)
Query: 498 LGQGGFGSVYLGMLP----DGIQVAVKKLES--IGQGKKEFSAEVTTIGNVHHLHLVKLK 551
+G G FG V G L I VA+K L+S + +++F +E + +G H +++ L+
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
G + ++ E++ NGSLD ++ + + + + G+A G+ YL ++
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL---VGMLRGIAAGMKYL---ADM 128
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREES-LVYTTLRGTR---GYLAPEWITN 667
VH + N+L++ N KVSDFGL++ + + S YT+ G + + APE I
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 188
Query: 668 NPISEKSDVYSY 679
+ SDV+SY
Sbjct: 189 RKFTSASDVWSY 200
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 27/214 (12%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYL---GMLPD--GIQVAVKKLE-SIGQGKKEF 532
PT+F L F +LG+G FGSV + L D G VAVKKL+ S + ++F
Sbjct: 7 PTQFEERHL-----KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 533 SAEVTTIGNVHHLHLVKLKGFCIEGAHR--LLAYEYLGNGSLDKWIFNSTEES---RFLS 587
E+ + ++ H ++VK KG C R L E+L GSL +++ E + L
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQ 121
Query: 588 WNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREES 647
+ ++ + KG+ YL + + +H D+ N+L+++ K+ DFGL K++ +++
Sbjct: 122 YTSQ------ICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
Query: 648 LVYTTLRGTRG--YLAPEWITNNPISEKSDVYSY 679
G + APE +T + S SDV+S+
Sbjct: 173 XXKVKEPGESPIFWYAPESLTESKFSVASDVWSF 206
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 493 NFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLESI----GQGKKEFSAEVTTIGNVHHLHL 547
K+G+G F VY L DG+ VA+KK++ + + + E+ + ++H ++
Sbjct: 35 RIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNV 94
Query: 548 VKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHE 607
+K IE + E G L + I + ++ R + T + + + L ++H
Sbjct: 95 IKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS 154
Query: 608 ECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
+++H DIKP NV + K+ D GL + + + + + +L GT Y++PE I
Sbjct: 155 R---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAH-SLVGTPYYMSPERIHE 210
Query: 668 NPISEKSDVYS 678
N + KSD++S
Sbjct: 211 NGYNFKSDIWS 221
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 8/204 (3%)
Query: 479 PTRFSYD--DLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAE 535
P+ +YD ++ + KLG G +G VY G+ + VAVK L+ +EF E
Sbjct: 5 PSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 64
Query: 536 VTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIA 595
+ + H +LV+L G C + E++ G+L ++ + +S +A
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VSAVVLLYMA 122
Query: 596 LGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRG 655
++ + YL ++ +H D+ N L+ +N KV+DFGL++LM + + +
Sbjct: 123 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 656 TRGYLAPEWITNNPISEKSDVYSY 679
+ APE + N S KSDV+++
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAF 203
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 6/184 (3%)
Query: 497 KLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCI 555
KLG G FG VY G+ + VAVK L+ +EF E + + H +LV+L G C
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 556 EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVH 615
+ E++ G+L ++ + +S +A ++ + YL ++ +H
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQE--VSAVVLLYMATQISSAMEYLEKK---NFIH 132
Query: 616 CDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSD 675
D+ N L+ +N KV+DFGL++LM + + + + APE + N S KSD
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 676 VYSY 679
V+++
Sbjct: 193 VWAF 196
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 6/194 (3%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + +LG G FG V++G +VA+K L+ + F E + + H
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHD 64
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L E ++ EY+ GSL ++ + E R L ++A +A G+AY+
Sbjct: 65 KLVQLYAVVSEEPIYIVT-EYMNKGSLLDFLKDG--EGRALKLPNLVDMAAQVAAGMAYI 121
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+ +H D++ N+L+ + K++DFGLA+L+ E + + APE
Sbjct: 122 ER---MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAA 178
Query: 666 TNNPISEKSDVYSY 679
+ KSDV+S+
Sbjct: 179 LYGRFTIKSDVWSF 192
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 100/199 (50%), Gaps = 22/199 (11%)
Query: 494 FSTKLGQGGFGSVYL---GMLPD--GIQVAVKKLE-SIGQGKKEFSAEVTTIGNVHHLHL 547
F +LG+G FGSV + L D G VAVKKL+ S + ++F E+ + ++ H ++
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 548 VKLKGFCIEGAHR--LLAYEYLGNGSLDKWIFNSTEES---RFLSWNTRFNIALGMAKGL 602
VK KG C R L EYL GSL ++ E + L + ++ + KG+
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGM 145
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRG--YL 660
YL + + +H D+ N+L+++ K+ DFGL K++ +++ G +
Sbjct: 146 EYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 661 APEWITNNPISEKSDVYSY 679
APE +T + S SDV+S+
Sbjct: 203 APESLTESKFSVASDVWSF 221
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 100/199 (50%), Gaps = 22/199 (11%)
Query: 494 FSTKLGQGGFGSVYL---GMLPD--GIQVAVKKLE-SIGQGKKEFSAEVTTIGNVHHLHL 547
F +LG+G FGSV + L D G VAVKKL+ S + ++F E+ + ++ H ++
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 548 VKLKGFCIEGAHR--LLAYEYLGNGSLDKWIFNSTEES---RFLSWNTRFNIALGMAKGL 602
VK KG C R L EYL GSL ++ E + L + ++ + KG+
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGM 145
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRG--YL 660
YL + + +H D+ N+L+++ K+ DFGL K++ +++ G +
Sbjct: 146 EYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 661 APEWITNNPISEKSDVYSY 679
APE +T + S SDV+S+
Sbjct: 203 APESLTESKFSVASDVWSF 221
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 22/200 (11%)
Query: 493 NFSTKLGQGGFGSVYL---GMLPD--GIQVAVKKLESIGQGK-KEFSAEVTTIGNVHHLH 546
+ ++LG+G FGSV L L D G VAVK+L+ G + ++F E+ + +H
Sbjct: 10 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 69
Query: 547 LVKLKGFCI-EGAHRL-LAYEYLGNGSLDKWIFNST---EESRFLSWNTRFNIALGMAKG 601
+VK +G G L L EYL +G L ++ + SR L ++++ + KG
Sbjct: 70 IVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ------ICKG 123
Query: 602 LAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKL--MNREESLVYTTLRGTRGY 659
+ YL + VH D+ N+L++ K++DFGLAKL ++++ +V + +
Sbjct: 124 MEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFW 180
Query: 660 LAPEWITNNPISEKSDVYSY 679
APE +++N S +SDV+S+
Sbjct: 181 YAPESLSDNIFSRQSDVWSF 200
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 28/226 (12%)
Query: 479 PTRFSYDDLCKATKN---FSTKLGQGGFGSVY------LGMLPDGIQVAVKKLESIGQG- 528
PT+ Y++ + +N F LG G FG V LG ++VAVK L+S
Sbjct: 32 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 91
Query: 529 -KKEFSAEVTTIGNV-HHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFL 586
K+ +E+ + ++ H ++V L G C G L+ EY G L ++
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEY 151
Query: 587 SWNTRFN------------IALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVS 634
S+N N + +A+G+A+L + +H D+ NVLL + AK+
Sbjct: 152 SYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIG 208
Query: 635 DFGLAK-LMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYSY 679
DFGLA+ +MN +V R ++APE I + + +SDV+SY
Sbjct: 209 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 254
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 10/205 (4%)
Query: 479 PTRFSYD--DLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAE 535
P+ +YD ++ + KLG G +G VY G+ + VAVK L+ +EF E
Sbjct: 5 PSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 64
Query: 536 VTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIA 595
+ + H +LV+L G C + E++ G+L ++ + +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ------EVNAVVL 118
Query: 596 LGMAKGLAYLHEECEVK-IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLR 654
L MA ++ E E K +H D+ N L+ +N KV+DFGL++LM + + +
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAK 178
Query: 655 GTRGYLAPEWITNNPISEKSDVYSY 679
+ APE + N S KSDV+++
Sbjct: 179 FPIKWTAPESLAYNKFSIKSDVWAF 203
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 37/213 (17%)
Query: 494 FSTKLGQGGFGSVYLG----MLP--DGIQVAVKKL-ESIGQGKKEFSAEVTTIGNVHHLH 546
+LG+G FG V+L + P D + VAVK L + +K+F E + N+ H H
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF------------LSWNTRFNI 594
+VK G C +G ++ +EY+ +G L+K++ ++ L + +I
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 595 ALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLR 654
A +A G+ YL + VH D+ N L+ N K+ DFG M+R+ VY+T
Sbjct: 139 ASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFG----MSRD---VYSTDY 188
Query: 655 GTRG--------YLAPEWITNNPISEKSDVYSY 679
G ++ PE I + +SDV+S+
Sbjct: 189 YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 221
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 6/184 (3%)
Query: 497 KLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCI 555
KLG G +G VY G+ + VAVK L+ +EF E + + H +LV+L G C
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 556 EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVH 615
+ E++ G+L ++ + +S +A ++ + YL ++ +H
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQE--VSAVVLLYMATQISSAMEYLEKK---NFIH 132
Query: 616 CDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSD 675
D+ N L+ +N KV+DFGL++LM + + + + APE + N S KSD
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 676 VYSY 679
V+++
Sbjct: 193 VWAF 196
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + KLG G FG V++G + +VAVK L+ + F E + + H
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD 67
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV+L + + E++ GSL F ++E + + + +A+G+AY+
Sbjct: 68 KLVRLYAVVTKEEPIYIITEFMAKGSLLD--FLKSDEGGKVLLPKLIDFSAQIAEGMAYI 125
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
+ +H D++ NVL+ ++ K++DFGLA+++ E YT G + + AP
Sbjct: 126 ERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE---YTAREGAKFPIKWTAP 179
Query: 663 EWITNNPISEKSDVYSY 679
E I + KS+V+S+
Sbjct: 180 EAINFGCFTIKSNVWSF 196
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 10/205 (4%)
Query: 479 PTRFSYD--DLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAE 535
P+ +YD ++ + KLG G +G VY G+ + VAVK L+ +EF E
Sbjct: 5 PSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 64
Query: 536 VTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIA 595
+ + H +LV+L G C + E++ G+L ++ + +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ------EVNAVVL 118
Query: 596 LGMAKGLAYLHEECEVK-IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLR 654
L MA ++ E E K +H D+ N L+ +N KV+DFGL++LM + + +
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 178
Query: 655 GTRGYLAPEWITNNPISEKSDVYSY 679
+ APE + N S KSDV+++
Sbjct: 179 FPIKWTAPESLAYNKFSIKSDVWAF 203
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYL---GMLPD--GIQVAVKKLE-SIGQGKKEF 532
PT+F L F +LG+G FGSV + L D G VAVKKL+ S + ++F
Sbjct: 5 PTQFEERHL-----KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 59
Query: 533 SAEVTTIGNVHHLHLVKLKGFCIEGAHR--LLAYEYLGNGSLDKWIFNSTEES---RFLS 587
E+ + ++ H ++VK KG C R L EYL GSL ++ E + L
Sbjct: 60 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 119
Query: 588 WNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREES 647
+ ++ + KG+ YL + + +H ++ N+L+++ K+ DFGL K++ +++
Sbjct: 120 YTSQ------ICKGMEYLGTK---RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKE 170
Query: 648 LVYTTLRGTRG--YLAPEWITNNPISEKSDVYSY 679
G + APE +T + S SDV+S+
Sbjct: 171 YYKVKEPGESPIFWYAPESLTESKFSVASDVWSF 204
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 105/233 (45%), Gaps = 35/233 (15%)
Query: 479 PTRFSYDDLCKATKN---FSTKLGQGGFGSVY------LGMLPDGIQVAVKKLESIGQG- 528
PT+ Y++ + +N F LG G FG V LG ++VAVK L+S
Sbjct: 17 PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD 76
Query: 529 -KKEFSAEVTTIGNV-HHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTE----- 581
K+ +E+ + ++ H ++V L G C G L+ EY G L ++ E
Sbjct: 77 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGP 136
Query: 582 --------------ESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDD 627
+ R L + + +A+G+A+L + +H D+ NVLL +
Sbjct: 137 SLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTN 193
Query: 628 NFTAKVSDFGLAK-LMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYSY 679
AK+ DFGLA+ +MN +V R ++APE I + + +SDV+SY
Sbjct: 194 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSY 246
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 22/200 (11%)
Query: 493 NFSTKLGQGGFGSVYL---GMLPD--GIQVAVKKLESIGQGK-KEFSAEVTTIGNVHHLH 546
+ ++LG+G FGSV L L D G VAVK+L+ G + ++F E+ + +H
Sbjct: 26 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 85
Query: 547 LVKLKGFCI-EGAHRL-LAYEYLGNGSLDKWIFNST---EESRFLSWNTRFNIALGMAKG 601
+VK +G G L L EYL +G L ++ + SR L ++++ + KG
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ------ICKG 139
Query: 602 LAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKL--MNREESLVYTTLRGTRGY 659
+ YL + VH D+ N+L++ K++DFGLAKL ++++ +V + +
Sbjct: 140 MEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 196
Query: 660 LAPEWITNNPISEKSDVYSY 679
APE +++N S +SDV+S+
Sbjct: 197 YAPESLSDNIFSRQSDVWSF 216
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 10/205 (4%)
Query: 479 PTRFSYD--DLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAE 535
P+ +YD ++ + KLG G +G VY G+ + VAVK L+ +EF E
Sbjct: 5 PSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 64
Query: 536 VTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIA 595
+ + H +LV+L G C + E++ G+L ++ + +
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ------EVNAVVL 118
Query: 596 LGMAKGLAYLHEECEVK-IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLR 654
L MA ++ E E K +H D+ N L+ +N KV+DFGL++LM + + +
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 178
Query: 655 GTRGYLAPEWITNNPISEKSDVYSY 679
+ APE + N S KSDV+++
Sbjct: 179 FPIKWTAPESLAYNKFSIKSDVWAF 203
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 91/183 (49%), Gaps = 10/183 (5%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEG 557
+G+G FG V VA+K++ES + +K F E+ + V+H ++VKL G C+
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQIESESE-RKAFIVELRQLSRVNHPNIVKLYGACLNP 74
Query: 558 AHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCD 617
L EY GSL + + E + + + L ++G+AYLH ++H D
Sbjct: 75 V--CLVMEYAEGGSLYN-VLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 131
Query: 618 IKPENVLLDDNFTA-KVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDV 676
+KP N+LL T K+ DFG A + T +G+ ++APE + SEK DV
Sbjct: 132 LKPPNLLLVAGGTVLKICDFGTACDIQTH----MTNNKGSAAWMAPEVFEGSNYSEKCDV 187
Query: 677 YSY 679
+S+
Sbjct: 188 FSW 190
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 22/200 (11%)
Query: 493 NFSTKLGQGGFGSVYL---GMLPD--GIQVAVKKLESIGQGK-KEFSAEVTTIGNVHHLH 546
+ ++LG+G FGSV L L D G VAVK+L+ G + ++F E+ + +H
Sbjct: 13 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 72
Query: 547 LVKLKGFCI-EGAHRL-LAYEYLGNGSLDKWIFNST---EESRFLSWNTRFNIALGMAKG 601
+VK +G G L L EYL +G L ++ + SR L ++++ + KG
Sbjct: 73 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ------ICKG 126
Query: 602 LAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKL--MNREESLVYTTLRGTRGY 659
+ YL + VH D+ N+L++ K++DFGLAKL ++++ +V + +
Sbjct: 127 MEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 183
Query: 660 LAPEWITNNPISEKSDVYSY 679
APE +++N S +SDV+S+
Sbjct: 184 YAPESLSDNIFSRQSDVWSF 203
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 6/184 (3%)
Query: 497 KLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCI 555
KLG G +G VY G+ + VAVK L+ +EF E + + H +LV+L G C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 556 EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVH 615
+ E++ G+L ++ + +S +A ++ + YL ++ +H
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQE--VSAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 616 CDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSD 675
D+ N L+ +N KV+DFGL++LM + + + + APE + N S KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 676 VYSY 679
V+++
Sbjct: 195 VWAF 198
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + KLG G FG V++ +VAVK ++ + F AE + + H
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 70
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LVKL + ++ E++ GSL F ++E + + +A+G+A++
Sbjct: 71 KLVKLHAVVTKEPIYIIT-EFMAKGSLLD--FLKSDEGSKQPLPKLIDFSAQIAEGMAFI 127
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
+ +H D++ N+L+ + K++DFGLA+++ E YT G + + AP
Sbjct: 128 EQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE---YTAREGAKFPIKWTAP 181
Query: 663 EWITNNPISEKSDVYSY 679
E I + KSDV+S+
Sbjct: 182 EAINFGSFTIKSDVWSF 198
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 6/184 (3%)
Query: 497 KLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCI 555
KLG G +G VY G+ + VAVK L+ +EF E + + H +LV+L G C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 556 EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVH 615
+ E++ G+L ++ + +S +A ++ + YL ++ +H
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQE--VSAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 616 CDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSD 675
D+ N L+ +N KV+DFGL++LM + + + + APE + N S KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 676 VYSY 679
V+++
Sbjct: 195 VWAF 198
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 91/183 (49%), Gaps = 10/183 (5%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEG 557
+G+G FG V VA+K++ES + +K F E+ + V+H ++VKL G C+
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQIESESE-RKAFIVELRQLSRVNHPNIVKLYGACLNP 73
Query: 558 AHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCD 617
L EY GSL + + E + + + L ++G+AYLH ++H D
Sbjct: 74 V--CLVMEYAEGGSLYN-VLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 130
Query: 618 IKPENVLLDDNFTA-KVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDV 676
+KP N+LL T K+ DFG A + T +G+ ++APE + SEK DV
Sbjct: 131 LKPPNLLLVAGGTVLKICDFGTACDIQTH----MTNNKGSAAWMAPEVFEGSNYSEKCDV 186
Query: 677 YSY 679
+S+
Sbjct: 187 FSW 189
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 6/184 (3%)
Query: 497 KLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCI 555
KLG G +G VY G+ + VAVK L+ +EF E + + H +LV+L G C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 556 EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVH 615
+ E++ G+L ++ + +S +A ++ + YL ++ +H
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQE--VSAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 616 CDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSD 675
D+ N L+ +N KV+DFGL++LM + + + + APE + N S KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 676 VYSY 679
V+++
Sbjct: 195 VWAF 198
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 105/200 (52%), Gaps = 22/200 (11%)
Query: 493 NFSTKLGQGGFGSVYL---GMLPD--GIQVAVKKLESIGQGK-KEFSAEVTTIGNVHHLH 546
+ ++LG+G FGSV L L D G VAVK+L+ G + ++F E+ + +H
Sbjct: 14 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 73
Query: 547 LVKLKGFCI-EGAHRL-LAYEYLGNGSLDKWIFNST---EESRFLSWNTRFNIALGMAKG 601
+VK +G G L L EYL +G L ++ + SR L ++++ + KG
Sbjct: 74 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ------ICKG 127
Query: 602 LAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKL--MNREESLVYTTLRGTRGY 659
+ YL + VH D+ N+L++ K++DFGLAKL ++++ +V + +
Sbjct: 128 MEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 184
Query: 660 LAPEWITNNPISEKSDVYSY 679
APE +++N S +SDV+S+
Sbjct: 185 YAPESLSDNIFSRQSDVWSF 204
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 8/204 (3%)
Query: 479 PTRFSYD--DLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAE 535
P+ +YD ++ + KLG G +G VY G+ + VAVK L+ +EF E
Sbjct: 5 PSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 64
Query: 536 VTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIA 595
+ + H +LV+L G C + E++ G+L ++ + ++ +A
Sbjct: 65 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMA 122
Query: 596 LGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRG 655
++ + YL ++ +H D+ N L+ +N KV+DFGL++LM + + +
Sbjct: 123 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 656 TRGYLAPEWITNNPISEKSDVYSY 679
+ APE + N S KSDV+++
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAF 203
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 89/192 (46%), Gaps = 15/192 (7%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGIQ-VAVKKLESIGQGKKEFSAE--VTTIGNVHHLHLVK 549
+F LG G F V L + VA+K + KE S E + + + H ++V
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
L G H L + + G L F+ E F + + + + YLH+
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYLHD-- 134
Query: 610 EVKIVHCDIKPENVL---LDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWIT 666
+ IVH D+KPEN+L LD++ +SDFGL+K+ + V +T GT GY+APE +
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLA 191
Query: 667 NNPISEKSDVYS 678
P S+ D +S
Sbjct: 192 QKPYSKAVDCWS 203
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 89/192 (46%), Gaps = 15/192 (7%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGIQ-VAVKKLESIGQGKKEFSAE--VTTIGNVHHLHLVK 549
+F LG G F V L + VA+K + KE S E + + + H ++V
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
L G H L + + G L F+ E F + + + + YLH+
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYLHD-- 134
Query: 610 EVKIVHCDIKPENVL---LDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWIT 666
+ IVH D+KPEN+L LD++ +SDFGL+K+ + V +T GT GY+APE +
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLA 191
Query: 667 NNPISEKSDVYS 678
P S+ D +S
Sbjct: 192 QKPYSKAVDCWS 203
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 93 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 146
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFGLAKL+ EE + + ++A E I +
Sbjct: 147 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 203
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 204 RIYTHQSDVWSY 215
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 83 LGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 136
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFGLAKL+ EE + + ++A E I +
Sbjct: 137 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 194 RIYTHQSDVWSY 205
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 6/184 (3%)
Query: 497 KLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCI 555
KLG G +G VY G+ + VAVK L+ +EF E + + H +LV+L G C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 556 EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVH 615
+ E++ G+L ++ + +S +A ++ + YL ++ +H
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQE--VSAVVLLYMATQISSAMEYLEKK---NFIH 134
Query: 616 CDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSD 675
D+ N L+ +N KV+DFGL++LM + + + + APE + N S KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 676 VYSY 679
V+++
Sbjct: 195 VWAF 198
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 12/207 (5%)
Query: 477 GMPTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAE 535
GM + ++ + KLG G +G VY G+ + VAVK L+ +EF E
Sbjct: 1 GMSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 60
Query: 536 VTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIA 595
+ + H +LV+L G C + E++ G+L ++ + ++ +A
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMA 118
Query: 596 LGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRG 655
++ + YL ++ +H D+ N L+ +N KV+DFGL++LM + YT G
Sbjct: 119 TQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAPAG 172
Query: 656 TR---GYLAPEWITNNPISEKSDVYSY 679
+ + APE + N S KSDV+++
Sbjct: 173 AKFPIKWTAPESLAYNKFSIKSDVWAF 199
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 86 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 139
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFGLAKL+ EE + + ++A E I +
Sbjct: 140 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 197 RIYTHQSDVWSY 208
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 86 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 139
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFGLAKL+ EE + + ++A E I +
Sbjct: 140 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 197 RIYTHQSDVWSY 208
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 83 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 136
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFGLAKL+ EE + + ++A E I +
Sbjct: 137 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 194 RIYTHQSDVWSY 205
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 89/192 (46%), Gaps = 15/192 (7%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGIQ-VAVKKLESIGQGKKEFSAE--VTTIGNVHHLHLVK 549
+F LG G F V L + VA+K + KE S E + + + H ++V
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
L G H L + + G L F+ E F + + + + YLH+
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYLHD-- 134
Query: 610 EVKIVHCDIKPENVL---LDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWIT 666
+ IVH D+KPEN+L LD++ +SDFGL+K+ + V +T GT GY+APE +
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLA 191
Query: 667 NNPISEKSDVYS 678
P S+ D +S
Sbjct: 192 QKPYSKAVDCWS 203
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + KLG G FG V++ +VAVK ++ + F AE + + H
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 243
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LVKL + ++ E++ GSL F ++E + + +A+G+A++
Sbjct: 244 KLVKLHAVVTKEPIYIIT-EFMAKGSLLD--FLKSDEGSKQPLPKLIDFSAQIAEGMAFI 300
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAP 662
+ +H D++ N+L+ + K++DFGLA+++ E YT G + + AP
Sbjct: 301 EQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE---YTAREGAKFPIKWTAP 354
Query: 663 EWITNNPISEKSDVYSY 679
E I + KSDV+S+
Sbjct: 355 EAINFGSFTIKSDVWSF 371
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 89/192 (46%), Gaps = 15/192 (7%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGIQ-VAVKKLESIGQGKKEFSAE--VTTIGNVHHLHLVK 549
+F LG G F V L + VA+K + KE S E + + + H ++V
Sbjct: 21 DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
L G H L + + G L F+ E F + + + + YLH+
Sbjct: 81 LDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYLHD-- 134
Query: 610 EVKIVHCDIKPENVL---LDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWIT 666
+ IVH D+KPEN+L LD++ +SDFGL+K+ + V +T GT GY+APE +
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLA 191
Query: 667 NNPISEKSDVYS 678
P S+ D +S
Sbjct: 192 QKPYSKAVDCWS 203
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 85 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 138
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFGLAKL+ EE + + ++A E I +
Sbjct: 139 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 196 RIYTHQSDVWSY 207
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 84 LGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 137
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFGLAKL+ EE + + ++A E I +
Sbjct: 138 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 194
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 195 RIYTHQSDVWSY 206
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 87 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 140
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFGLAKL+ EE + + ++A E I +
Sbjct: 141 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 197
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 198 RIYTHQSDVWSY 209
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 83 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 136
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFGLAKL+ EE + + ++A E I +
Sbjct: 137 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 194 RIYTHQSDVWSY 205
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 77 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 130
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFGLAKL+ EE + + ++A E I +
Sbjct: 131 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 187
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 188 RIYTHQSDVWSY 199
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 86 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 139
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFGLAKL+ EE + + ++A E I +
Sbjct: 140 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 197 RIYTHQSDVWSY 208
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 89 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 142
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFGLAKL+ EE + + ++A E I +
Sbjct: 143 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 199
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 200 RIYTHQSDVWSY 211
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 95/192 (49%), Gaps = 16/192 (8%)
Query: 498 LGQGGFGSVYLGML--PDGIQ--VAVKKLES--IGQGKKEFSAEVTTIGNVHHLHLVKLK 551
+G G FG V G L P + VA+K L+ + ++EF +E + +G H ++++L+
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
G ++ E++ NG+LD F + +F + G+A G+ YL E+
Sbjct: 84 GVVTNSMPVMILTEFMENGALDS--FLRLNDGQFTVIQL-VGMLRGIASGMRYL---AEM 137
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRGTRG--YLAPEWITN 667
VH D+ N+L++ N KVSDFGL++ + N + ++L G + APE I
Sbjct: 138 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAF 197
Query: 668 NPISEKSDVYSY 679
+ SD +SY
Sbjct: 198 RKFTSASDAWSY 209
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 108 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 161
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFGLAKL+ EE + + ++A E I +
Sbjct: 162 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 218
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 219 RIYTHQSDVWSY 230
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 85 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 138
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFGLAKL+ EE + + ++A E I +
Sbjct: 139 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 196 RIYTHQSDVWSY 207
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 90 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFGLAKL+ EE + + ++A E I +
Sbjct: 144 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 201 RIYTHQSDVWSY 212
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 89/193 (46%), Gaps = 18/193 (9%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
F +LG G FG V G VA+K ++ + EF E + N+ H LV+L G
Sbjct: 11 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 70
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIA--LGMAKGLAYLHEECE 610
C + + EY+ NG L N E R RF L M K + E E
Sbjct: 71 VCTKQRPIFIITEYMANGCL----LNYLREMRH-----RFQTQQLLEMCKDVCEAMEYLE 121
Query: 611 VK-IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAPEWIT 666
K +H D+ N L++D KVSDFGL++ + +E YT+ G++ + PE +
Sbjct: 122 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLM 178
Query: 667 NNPISEKSDVYSY 679
+ S KSD++++
Sbjct: 179 YSKFSSKSDIWAF 191
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 89/193 (46%), Gaps = 18/193 (9%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
F +LG G FG V G VA+K ++ + EF E + N+ H LV+L G
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIA--LGMAKGLAYLHEECE 610
C + + EY+ NG L N E R RF L M K + E E
Sbjct: 72 VCTKQRPIFIITEYMANGCL----LNYLREMRH-----RFQTQQLLEMCKDVCEAMEYLE 122
Query: 611 VK-IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAPEWIT 666
K +H D+ N L++D KVSDFGL++ + +E YT+ G++ + PE +
Sbjct: 123 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLM 179
Query: 667 NNPISEKSDVYSY 679
+ S KSD++++
Sbjct: 180 YSKFSSKSDIWAF 192
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 89/193 (46%), Gaps = 18/193 (9%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
F +LG G FG V G VA+K ++ + EF E + N+ H LV+L G
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 66
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIA--LGMAKGLAYLHEECE 610
C + + EY+ NG L N E R RF L M K + E E
Sbjct: 67 VCTKQRPIFIITEYMANGCL----LNYLREMRH-----RFQTQQLLEMCKDVCEAMEYLE 117
Query: 611 VK-IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAPEWIT 666
K +H D+ N L++D KVSDFGL++ + +E YT+ G++ + PE +
Sbjct: 118 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLM 174
Query: 667 NNPISEKSDVYSY 679
+ S KSD++++
Sbjct: 175 YSKFSSKSDIWAF 187
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 83 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 136
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFGLAKL+ EE + + ++A E I +
Sbjct: 137 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 194 RIYTHQSDVWSY 205
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 6/184 (3%)
Query: 497 KLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCI 555
KLG G +G VY G+ + VAVK L+ +EF E + + H +LV+L G C
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 556 EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVH 615
+ E++ G+L ++ + ++ +A ++ + YL ++ +H
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---NFIH 135
Query: 616 CDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSD 675
D+ N L+ +N KV+DFGL++LM + + + + APE + N S KSD
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 195
Query: 676 VYSY 679
V+++
Sbjct: 196 VWAF 199
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 86 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 139
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFGLAKL+ EE + + ++A E I +
Sbjct: 140 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 196
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 197 RIYTHQSDVWSY 208
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 6/184 (3%)
Query: 497 KLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCI 555
KLG G +G VY G+ + VAVK L+ +EF E + + H +LV+L G C
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 556 EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVH 615
+ E++ G+L ++ + +S +A ++ + YL ++ +H
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQE--VSAVVLLYMATQISSAMEYLEKK---NFIH 132
Query: 616 CDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSD 675
D+ N L+ +N KV+DFGL++LM + + + + APE + N S KSD
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 676 VYSY 679
V+++
Sbjct: 193 VWAF 196
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 84 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 137
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFGLAKL+ EE + + ++A E I +
Sbjct: 138 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 194
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 195 RIYTHQSDVWSY 206
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 497 KLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCI 555
KLG G +G VY G+ + VAVK L+ +EF E + + H +LV+L G C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 556 EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK-IV 614
+ E++ G+L ++ + + L MA ++ E E K +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQ------EVNAVVLLYMATQISSAMEYLEKKNFI 133
Query: 615 HCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKS 674
H D+ N L+ +N KV+DFGL++LM + + + + APE + N S KS
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 675 DVYSY 679
DV+++
Sbjct: 194 DVWAF 198
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 89/193 (46%), Gaps = 18/193 (9%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
F +LG G FG V G VA+K ++ + EF E + N+ H LV+L G
Sbjct: 18 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 77
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIA--LGMAKGLAYLHEECE 610
C + + EY+ NG L N E R RF L M K + E E
Sbjct: 78 VCTKQRPIFIITEYMANGCL----LNYLREMRH-----RFQTQQLLEMCKDVCEAMEYLE 128
Query: 611 VK-IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAPEWIT 666
K +H D+ N L++D KVSDFGL++ + +E YT+ G++ + PE +
Sbjct: 129 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLM 185
Query: 667 NNPISEKSDVYSY 679
+ S KSD++++
Sbjct: 186 YSKFSSKSDIWAF 198
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 89/193 (46%), Gaps = 18/193 (9%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
F +LG G FG V G VA+K ++ + EF E + N+ H LV+L G
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIA--LGMAKGLAYLHEECE 610
C + + EY+ NG L N E R RF L M K + E E
Sbjct: 87 VCTKQRPIFIITEYMANGCL----LNYLREMRH-----RFQTQQLLEMCKDVCEAMEYLE 137
Query: 611 VK-IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAPEWIT 666
K +H D+ N L++D KVSDFGL++ + +E YT+ G++ + PE +
Sbjct: 138 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLM 194
Query: 667 NNPISEKSDVYSY 679
+ S KSD++++
Sbjct: 195 YSKFSSKSDIWAF 207
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 95/193 (49%), Gaps = 17/193 (8%)
Query: 498 LGQGGFGSVYLGML-PDGI----QVAVKKL--ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
LG+G FG V L P+G QVAVK L ES G + E+ + N++H ++VK
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 551 KGFCIE--GAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
KG C E G L E+L +GSL +++ + + ++ + A+ + KG+ YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQICKGMDYLGSR 133
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRGTRGYLAPEWIT 666
+ VH D+ NVL++ K+ DFGL K + ++E V + APE +
Sbjct: 134 ---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 667 NNPISEKSDVYSY 679
+ SDV+S+
Sbjct: 191 QSKFYIASDVWSF 203
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 497 KLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCI 555
KLG G +G VY G+ + VAVK L+ +EF E + + H +LV+L G C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 556 EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK-IV 614
+ E++ G+L ++ + + L MA ++ E E K +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQ------EVNAVVLLYMATQISSAMEYLEKKNFI 133
Query: 615 HCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKS 674
H D+ N L+ +N KV+DFGL++LM + + + + APE + N S KS
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 675 DVYSY 679
DV+++
Sbjct: 194 DVWAF 198
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 8/185 (4%)
Query: 497 KLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCI 555
KLG G +G VY G+ + VAVK L+ +EF E + + H +LV+L G C
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 556 EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK-IV 614
+ E++ G+L ++ + + L MA ++ E E K +
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQ------EVNAVVLLYMATQISSAMEYLEKKNFI 137
Query: 615 HCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKS 674
H D+ N L+ +N KV+DFGL++LM + + + + APE + N S KS
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 675 DVYSY 679
DV+++
Sbjct: 198 DVWAF 202
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 95/193 (49%), Gaps = 17/193 (8%)
Query: 498 LGQGGFGSVYLGML-PDGI----QVAVKKL--ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
LG+G FG V L P+G QVAVK L ES G + E+ + N++H ++VK
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 551 KGFCIE--GAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
KG C E G L E+L +GSL +++ + + ++ + A+ + KG+ YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQICKGMDYLGSR 145
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRGTRGYLAPEWIT 666
+ VH D+ NVL++ K+ DFGL K + ++E V + APE +
Sbjct: 146 ---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 667 NNPISEKSDVYSY 679
+ SDV+S+
Sbjct: 203 QSKFYIASDVWSF 215
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 6/184 (3%)
Query: 497 KLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCI 555
KLG G +G VY G+ + VAVK L+ +EF E + + H +LV+L G C
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 556 EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVH 615
+ E++ G+L ++ + ++ +A ++ + YL ++ +H
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---NFIH 147
Query: 616 CDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSD 675
D+ N L+ +N KV+DFGL++LM + + + + APE + N S KSD
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 207
Query: 676 VYSY 679
V+++
Sbjct: 208 VWAF 211
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 98/191 (51%), Gaps = 17/191 (8%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLE--SIGQGKKEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +PDG I VA+K L + + KE E + V ++ +L
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESR-FLSWNTRFNIALGMAKGLAYLHEEC 609
G C+ +L+ + + G L + E+R L N + +AKG++YL +
Sbjct: 85 LGICLTSTVQLVT-QLMPYGCL----LDHVRENRGRLGSQDLLNWCMQIAKGMSYLED-- 137
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITNN 668
V++VH D+ NVL+ K++DFGLA+L++ +E+ + + ++A E I
Sbjct: 138 -VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRR 196
Query: 669 PISEKSDVYSY 679
+ +SDV+SY
Sbjct: 197 RFTHQSDVWSY 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 6/184 (3%)
Query: 497 KLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCI 555
KLG G +G VY G+ + VAVK L+ +EF E + + H +LV+L G C
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 556 EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVH 615
+ E++ G+L ++ + ++ +A ++ + YL ++ +H
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---NFIH 136
Query: 616 CDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSD 675
D+ N L+ +N KV+DFGL++LM + + + + APE + N S KSD
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 676 VYSY 679
V+++
Sbjct: 197 VWAF 200
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 6/184 (3%)
Query: 497 KLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCI 555
KLG G +G VY G+ + VAVK L+ +EF E + + H +LV+L G C
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 556 EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVH 615
+ E++ G+L ++ + ++ +A ++ + YL ++ +H
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---NFIH 136
Query: 616 CDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSD 675
D+ N L+ +N KV+DFGL++LM + + + + APE + N S KSD
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 676 VYSY 679
V+++
Sbjct: 197 VWAF 200
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 94/195 (48%), Gaps = 20/195 (10%)
Query: 495 STKLGQGGFGSVYLG---MLPDGIQVAVKKLESIGQGK---KEFSAEVTTIGNVHHLHLV 548
+LG G FGSV G M I VA+K L+ G K +E E + + + ++V
Sbjct: 15 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQ-GTEKADTEEMMREAQIMHQLDNPYIV 73
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
+L G C + +L E G G L K++ EE + + + ++ G+ YL E+
Sbjct: 74 RLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREE---IPVSNVAELLHQVSMGMKYLEEK 129
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGT----RGYLAPEW 664
VH D+ NVLL + AK+SDFGL+K + ++S Y T R + APE
Sbjct: 130 ---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS--YYTARSAGKWPLKWYAPEC 184
Query: 665 ITNNPISEKSDVYSY 679
I S +SDV+SY
Sbjct: 185 INFRKFSSRSDVWSY 199
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 96/206 (46%), Gaps = 6/206 (2%)
Query: 475 ISGMPTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFS 533
I G+ + ++ + KLG G +G VY G+ + VAVK L+ +EF
Sbjct: 205 IYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 264
Query: 534 AEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFN 593
E + + H +LV+L G C + E++ G+L ++ + +S
Sbjct: 265 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE--VSAVVLLY 322
Query: 594 IALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTL 653
+A ++ + YL ++ +H ++ N L+ +N KV+DFGL++LM + +
Sbjct: 323 MATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 379
Query: 654 RGTRGYLAPEWITNNPISEKSDVYSY 679
+ + APE + N S KSDV+++
Sbjct: 380 KFPIKWTAPESLAYNKFSIKSDVWAF 405
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 84/190 (44%), Gaps = 12/190 (6%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
F +LG G FG V G VA+K ++ + EF E + N+ H LV+L G
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIA--LGMAKGLAYLHEECE 610
C + + EY+ NG L N E R RF L M K + E E
Sbjct: 87 VCTKQRPIFIITEYMANGCL----LNYLREMRH-----RFQTQQLLEMCKDVCEAMEYLE 137
Query: 611 VK-IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
K +H D+ N L++D KVSDFGL++ + +E + + PE + +
Sbjct: 138 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSK 197
Query: 670 ISEKSDVYSY 679
S KSD++++
Sbjct: 198 FSSKSDIWAF 207
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 12/187 (6%)
Query: 497 KLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCI 555
KLG G +G VY G+ + VAVK L+ +EF E + + H +LV+L G C
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 556 EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVH 615
+ E++ G+L ++ + ++ +A ++ + YL ++ +H
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQE--VNAVVLLYMATQISSAMEYLEKK---NFIH 136
Query: 616 CDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR---GYLAPEWITNNPISE 672
D+ N L+ +N KV+DFGL++LM + YT G + + APE + N S
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAPAGAKFPIKWTAPESLAYNKFSI 193
Query: 673 KSDVYSY 679
KSDV+++
Sbjct: 194 KSDVWAF 200
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 99/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +A+G+ YL +
Sbjct: 80 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAEGMNYLEDR 133
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFGLAKL+ EE + + ++A E I +
Sbjct: 134 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 190
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 191 RIYTHQSDVWSY 202
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 94/193 (48%), Gaps = 15/193 (7%)
Query: 493 NFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLES---IGQGKKEF-SAEVTTIGNVHHLHL 547
F LG+G F +V L L + A+K LE I + K + + E + + H
Sbjct: 40 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 99
Query: 548 VKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
VKL FC + +L Y NG L K+I + F TRF A + L YLH
Sbjct: 100 VKLY-FCFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLH 154
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT-TLRGTRGYLAPEWI 665
+ I+H D+KPEN+LL+++ +++DFG AK+++ E GT Y++PE +
Sbjct: 155 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 211
Query: 666 TNNPISEKSDVYS 678
T + SD+++
Sbjct: 212 TEKSACKSSDLWA 224
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 89/190 (46%), Gaps = 16/190 (8%)
Query: 493 NFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFSAEVTT-----IGNVHHLH 546
+F +G+G FG V L + + AVK L+ KK+ + + + NV H
Sbjct: 41 HFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPF 100
Query: 547 LVKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LV L F + A +L +Y+ G L ++ E FL RF A +A L YL
Sbjct: 101 LVGLH-FSFQTADKLYFVLDYINGGEL---FYHLQRERCFLEPRARF-YAAEIASALGYL 155
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
H + IV+ D+KPEN+LLD ++DFGL K N E + +T GT YLAPE +
Sbjct: 156 HS---LNIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFCGTPEYLAPEVL 211
Query: 666 TNNPISEKSD 675
P D
Sbjct: 212 HKQPYDRTVD 221
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 6/183 (3%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIE 556
+LG G FG V LG VAVK ++ + EF E T+ + H LVK G C +
Sbjct: 15 ELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 557 GAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHC 616
+ EY+ NG L ++ + L + + + +G+A+L + +H
Sbjct: 75 EYPIYIVTEYISNGCLLNYL---RSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHR 128
Query: 617 DIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDV 676
D+ N L+D + KVSDFG+ + + ++ + + + APE S KSDV
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDV 188
Query: 677 YSY 679
+++
Sbjct: 189 WAF 191
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
L G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 83 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 136
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFGLAKL+ EE + + ++A E I +
Sbjct: 137 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 194 RIYTHQSDVWSY 205
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 83 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 136
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFG AKL+ EE + + ++A E I +
Sbjct: 137 ---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 193
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 194 RIYTHQSDVWSY 205
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 85 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 138
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFG AKL+ EE + + ++A E I +
Sbjct: 139 ---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 196 RIYTHQSDVWSY 207
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 90 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFG AKL+ EE + + ++A E I +
Sbjct: 144 ---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 201 RIYTHQSDVWSY 212
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 87 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 140
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFG AKL+ EE + + ++A E I +
Sbjct: 141 ---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 197
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 198 RIYTHQSDVWSY 209
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
L G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 90 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFGLAKL+ EE + + ++A E I +
Sbjct: 144 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 201 RIYTHQSDVWSY 212
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+ +L K KE E + +V + H+ +L
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 117 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 170
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFGLAKL+ EE + + ++A E I +
Sbjct: 171 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 227
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 228 RIYTHQSDVWSY 239
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 85 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 138
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFG AKL+ EE + + ++A E I +
Sbjct: 139 ---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 196 RIYTHQSDVWSY 207
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 16/188 (8%)
Query: 498 LGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFC 554
LG+G +G V L + + + V + ++ + E+ ++H ++VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 555 IEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIV 614
EG + L EY G L F+ E + + G+ YLH + I
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 615 HCDIKPENVLLDDNFTAKVSDFGLAKLM---NREESLVYTTLRGTRGYLAPEWITNNPI- 670
H DIKPEN+LLD+ K+SDFGLA + NRE L + GT Y+APE +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMXGTLPYVAPELLKRREFH 184
Query: 671 SEKSDVYS 678
+E DV+S
Sbjct: 185 AEPVDVWS 192
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 16/188 (8%)
Query: 498 LGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFC 554
LG+G +G V L + + + V + ++ + E+ ++H ++VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 555 IEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIV 614
EG + L EY G L F+ E + + G+ YLH + I
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 615 HCDIKPENVLLDDNFTAKVSDFGLAKLM---NREESLVYTTLRGTRGYLAPEWITNNPI- 670
H DIKPEN+LLD+ K+SDFGLA + NRE L + GT Y+APE +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMXGTLPYVAPELLKRREFH 184
Query: 671 SEKSDVYS 678
+E DV+S
Sbjct: 185 AEPVDVWS 192
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
LG G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 85 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 138
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFG AKL+ EE + + ++A E I +
Sbjct: 139 ---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILH 195
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 196 RIYTHQSDVWSY 207
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 38/219 (17%)
Query: 493 NFSTKLGQGGFGSVY----LGMLP--DGIQVAVKKL--ESIGQGKKEFSAEVTTIGNVHH 544
+ +G+G FG V+ G+LP VAVK L E+ + +F E + +
Sbjct: 50 EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDN 109
Query: 545 LHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFN--------------------STEESR 584
++VKL G C G L +EY+ G L++++ + S+
Sbjct: 110 PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 585 FLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR 644
LS + IA +A G+AYL E K VH D+ N L+ +N K++DFGL++ +
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 226
Query: 645 EESLVYTTLRGTRG----YLAPEWITNNPISEKSDVYSY 679
+ Y G ++ PE I N + +SDV++Y
Sbjct: 227 AD---YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAY 262
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 16/193 (8%)
Query: 493 NFSTKLGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVK 549
+ LG+G +G V L + + + V + ++ + E+ ++H ++VK
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G EG + L EY G L F+ E + + G+ YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM---NREESLVYTTLRGTRGYLAPEWIT 666
+ I H DIKPEN+LLD+ K+SDFGLA + NRE L + GT Y+APE +
Sbjct: 123 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMXGTLPYVAPELLK 179
Query: 667 NNPI-SEKSDVYS 678
+E DV+S
Sbjct: 180 RREFHAEPVDVWS 192
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 98/192 (51%), Gaps = 19/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDG----IQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVKL 550
L G FG+VY G+ +P+G I VA+K+L K KE E + +V + H+ +L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE--SRFLSWNTRFNIALGMAKGLAYLHEE 608
G C+ +L+ + + G L ++ + S++L N + +AKG+ YL +
Sbjct: 90 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-LRGTRGYLAPEWITN 667
++VH D+ NVL+ K++DFGLAKL+ EE + + ++A E I +
Sbjct: 144 ---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILH 200
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 201 RIYTHQSDVWSY 212
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 16/188 (8%)
Query: 498 LGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFC 554
LG+G +G V L + + + V + ++ + E+ ++H ++VK G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 555 IEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIV 614
EG + L EY G L F+ E + + G+ YLH + I
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 615 HCDIKPENVLLDDNFTAKVSDFGLAKLM---NREESLVYTTLRGTRGYLAPEWITNNPI- 670
H DIKPEN+LLD+ K+SDFGLA + NRE L + GT Y+APE +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMXGTLPYVAPELLKRREFH 185
Query: 671 SEKSDVYS 678
+E DV+S
Sbjct: 186 AEPVDVWS 193
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 16/193 (8%)
Query: 493 NFSTKLGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVK 549
+ LG+G +G V L + + + V + ++ + E+ ++H ++VK
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVK 69
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G EG + L EY G L F+ E + + G+ YLH
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM---NREESLVYTTLRGTRGYLAPEWIT 666
+ I H DIKPEN+LLD+ K+SDFGLA + NRE L + GT Y+APE +
Sbjct: 124 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLK 180
Query: 667 NNPI-SEKSDVYS 678
+E DV+S
Sbjct: 181 RREFHAEPVDVWS 193
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 95/190 (50%), Gaps = 16/190 (8%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKKLESIG---QGKKEFSAEVTTIGNVHHLHLVKLKGF 553
++G G FG+VY G VAVK L Q + F EV + H++++ G+
Sbjct: 19 RIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKI 613
+ + ++ SL + S E++F +IA A+G+ YLH + I
Sbjct: 77 STK-PQLAIVTQWCEGSSLYHHLHAS--ETKF-EMKKLIDIARQTARGMDYLHAKS---I 129
Query: 614 VHCDIKPENVLLDDNFTAKVSDFGLAKLMNR-EESLVYTTLRGTRGYLAPEWIT---NNP 669
+H D+K N+ L ++ T K+ DFGLA + +R S + L G+ ++APE I +NP
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 670 ISEKSDVYSY 679
S +SDVY++
Sbjct: 190 YSFQSDVYAF 199
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 16/188 (8%)
Query: 498 LGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFC 554
LG+G +G V L + + + V + ++ + E+ ++H ++VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 555 IEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIV 614
EG + L EY G L F+ E + + G+ YLH + I
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 615 HCDIKPENVLLDDNFTAKVSDFGLAKLM---NREESLVYTTLRGTRGYLAPEWITNNPI- 670
H DIKPEN+LLD+ K+SDFGLA + NRE L + GT Y+APE +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMXGTLPYVAPELLKRREFH 184
Query: 671 SEKSDVYS 678
+E DV+S
Sbjct: 185 AEPVDVWS 192
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 95/193 (49%), Gaps = 15/193 (7%)
Query: 493 NFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLES---IGQGKKEF-SAEVTTIGNVHHLHL 547
F LG+G F +V L L + A+K LE I + K + + E + + H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 548 VKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
VKL F + +L Y NG L K+I + F TRF A + L YLH
Sbjct: 95 VKLY-FTFQDDEKLYFGLSYAKNGCLLKYI---RKIGSFDETCTRFYTA-EIVSALEYLH 149
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT-TLRGTRGYLAPEWI 665
+ I+H D+KPEN+LL+++ +++DFG AK+++ E + GT Y++PE +
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 206
Query: 666 TNNPISEKSDVYS 678
T S+ SD+++
Sbjct: 207 TEKSASKSSDLWA 219
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 8/207 (3%)
Query: 475 ISGMPTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFS 533
+ G+ + ++ + KLG G +G VY G+ + VAVK L+ +EF
Sbjct: 202 VYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 261
Query: 534 AEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFN 593
E + + H +LV+L G C + E++ G+L ++ +
Sbjct: 262 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE------VNAV 315
Query: 594 IALGMAKGLAYLHEECEVK-IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT 652
+ L MA ++ E E K +H ++ N L+ +N KV+DFGL++LM + +
Sbjct: 316 VLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 375
Query: 653 LRGTRGYLAPEWITNNPISEKSDVYSY 679
+ + APE + N S KSDV+++
Sbjct: 376 AKFPIKWTAPESLAYNKFSIKSDVWAF 402
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 8/207 (3%)
Query: 475 ISGMPTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFS 533
+ G+ + ++ + KLG G +G VY G+ + VAVK L+ +EF
Sbjct: 244 VYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFL 303
Query: 534 AEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFN 593
E + + H +LV+L G C + E++ G+L ++ +
Sbjct: 304 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE------VNAV 357
Query: 594 IALGMAKGLAYLHEECEVK-IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT 652
+ L MA ++ E E K +H ++ N L+ +N KV+DFGL++LM + +
Sbjct: 358 VLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 417
Query: 653 LRGTRGYLAPEWITNNPISEKSDVYSY 679
+ + APE + N S KSDV+++
Sbjct: 418 AKFPIKWTAPESLAYNKFSIKSDVWAF 444
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 16/188 (8%)
Query: 498 LGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFC 554
LG+G +G V L + + + V + ++ + E+ ++H ++VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 555 IEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIV 614
EG + L EY G L F+ E + + G+ YLH + I
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 615 HCDIKPENVLLDDNFTAKVSDFGLAKLM---NREESLVYTTLRGTRGYLAPEWITNNPI- 670
H DIKPEN+LLD+ K+SDFGLA + NRE L + GT Y+APE +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLKRREFH 184
Query: 671 SEKSDVYS 678
+E DV+S
Sbjct: 185 AEPVDVWS 192
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 16/188 (8%)
Query: 498 LGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFC 554
LG+G +G V L + + + V + ++ + E+ ++H ++VK G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 555 IEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIV 614
EG + L EY G L F+ E + + G+ YLH + I
Sbjct: 73 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 125
Query: 615 HCDIKPENVLLDDNFTAKVSDFGLAKLM---NREESLVYTTLRGTRGYLAPEWITNNPI- 670
H DIKPEN+LLD+ K+SDFGLA + NRE L + GT Y+APE +
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLKRREFH 183
Query: 671 SEKSDVYS 678
+E DV+S
Sbjct: 184 AEPVDVWS 191
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 16/193 (8%)
Query: 493 NFSTKLGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVK 549
+ LG+G +G V L + + + V + ++ + E+ ++H ++VK
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G EG + L EY G L F+ E + + G+ YLH
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 123
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM---NREESLVYTTLRGTRGYLAPEWIT 666
+ I H DIKPEN+LLD+ K+SDFGLA + NRE L + GT Y+APE +
Sbjct: 124 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLK 180
Query: 667 NNPI-SEKSDVYS 678
+E DV+S
Sbjct: 181 RREFHAEPVDVWS 193
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 16/193 (8%)
Query: 493 NFSTKLGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVK 549
+ LG+G +G V L + + + V + ++ + E+ ++H ++VK
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G EG + L EY G L F+ E + + G+ YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM---NREESLVYTTLRGTRGYLAPEWIT 666
+ I H DIKPEN+LLD+ K+SDFGLA + NRE L + GT Y+APE +
Sbjct: 123 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLK 179
Query: 667 NNPI-SEKSDVYS 678
+E DV+S
Sbjct: 180 RREFHAEPVDVWS 192
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 28/196 (14%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKKLESIG---QGKKEFSAEVTTIGNVHHLHLVKLKGF 553
++G G FG+VY G VAVK L Q + F EV + H++++ G+
Sbjct: 20 RIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRF------NIALGMAKGLAYLHE 607
+ ++ +W S+ T+F +IA A+G+ YLH
Sbjct: 78 STKPQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 608 ECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR-EESLVYTTLRGTRGYLAPEWIT 666
+ I+H D+K N+ L ++ T K+ DFGLA + +R S + L G+ ++APE I
Sbjct: 128 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 667 ---NNPISEKSDVYSY 679
NP S +SDVY++
Sbjct: 185 MQDKNPYSFQSDVYAF 200
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 16/188 (8%)
Query: 498 LGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFC 554
LG+G +G V L + + + V + ++ + E+ ++H ++VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 555 IEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIV 614
EG + L EY G L F+ E + + G+ YLH + I
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 615 HCDIKPENVLLDDNFTAKVSDFGLAKLM---NREESLVYTTLRGTRGYLAPEWITNNPI- 670
H DIKPEN+LLD+ K+SDFGLA + NRE L + GT Y+APE +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLKRREFH 184
Query: 671 SEKSDVYS 678
+E DV+S
Sbjct: 185 AEPVDVWS 192
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 16/193 (8%)
Query: 493 NFSTKLGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVK 549
+ LG+G +G V L + + + V + ++ + E+ ++H ++VK
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G EG + L EY G L F+ E + + G+ YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM---NREESLVYTTLRGTRGYLAPEWIT 666
+ I H DIKPEN+LLD+ K+SDFGLA + NRE L + GT Y+APE +
Sbjct: 123 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLK 179
Query: 667 NNPI-SEKSDVYS 678
+E DV+S
Sbjct: 180 RREFHAEPVDVWS 192
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 16/193 (8%)
Query: 493 NFSTKLGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVK 549
+ LG+G +G V L + + + V + ++ + E+ ++H ++VK
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G EG + L EY G L F+ E + + G+ YLH
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-- 122
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM---NREESLVYTTLRGTRGYLAPEWIT 666
+ I H DIKPEN+LLD+ K+SDFGLA + NRE L + GT Y+APE +
Sbjct: 123 -IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLK 179
Query: 667 NNPI-SEKSDVYS 678
+E DV+S
Sbjct: 180 RREFHAEPVDVWS 192
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 28/196 (14%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKKLESIG---QGKKEFSAEVTTIGNVHHLHLVKLKGF 553
++G G FG+VY G VAVK L Q + F EV + H++++ G+
Sbjct: 15 RIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRF------NIALGMAKGLAYLHE 607
+ ++ +W S+ T+F +IA A+G+ YLH
Sbjct: 73 STKPQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 608 ECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR-EESLVYTTLRGTRGYLAPEWIT 666
+ I+H D+K N+ L ++ T K+ DFGLA + +R S + L G+ ++APE I
Sbjct: 123 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 667 ---NNPISEKSDVYSY 679
NP S +SDVY++
Sbjct: 180 MQDKNPYSFQSDVYAF 195
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 16/188 (8%)
Query: 498 LGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFC 554
LG+G +G V L + + + V + ++ + E+ ++H ++VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 555 IEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIV 614
EG + L EY G L F+ E + + G+ YLH + I
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 615 HCDIKPENVLLDDNFTAKVSDFGLAKLM---NREESLVYTTLRGTRGYLAPEWITNNPI- 670
H DIKPEN+LLD+ K+SDFGLA + NRE L + GT Y+APE +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLKRREFH 184
Query: 671 SEKSDVYS 678
+E DV+S
Sbjct: 185 AEPVDVWS 192
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 28/196 (14%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKKLESIG---QGKKEFSAEVTTIGNVHHLHLVKLKGF 553
++G G FG+VY G VAVK L Q + F EV + H++++ G+
Sbjct: 20 RIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRF------NIALGMAKGLAYLHE 607
+ ++ +W S+ T+F +IA A+G+ YLH
Sbjct: 78 STKPQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 608 ECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR-EESLVYTTLRGTRGYLAPEWIT 666
+ I+H D+K N+ L ++ T K+ DFGLA + +R S + L G+ ++APE I
Sbjct: 128 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 667 ---NNPISEKSDVYSY 679
NP S +SDVY++
Sbjct: 185 MQDKNPYSFQSDVYAF 200
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 16/188 (8%)
Query: 498 LGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFC 554
LG+G +G V L + + + V + ++ + E+ ++H ++VK G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 555 IEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIV 614
EG + L EY G L F+ E + + G+ YLH + I
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 615 HCDIKPENVLLDDNFTAKVSDFGLAKLM---NREESLVYTTLRGTRGYLAPEWITNNPI- 670
H DIKPEN+LLD+ K+SDFGLA + NRE L + GT Y+APE +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLKRREFH 185
Query: 671 SEKSDVYS 678
+E DV+S
Sbjct: 186 AEPVDVWS 193
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 16/188 (8%)
Query: 498 LGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFC 554
LG+G +G V L + + + V + ++ + E+ ++H ++VK G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 555 IEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIV 614
EG + L EY G L F+ E + + G+ YLH + I
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 615 HCDIKPENVLLDDNFTAKVSDFGLAKLM---NREESLVYTTLRGTRGYLAPEWITNNPI- 670
H DIKPEN+LLD+ K+SDFGLA + NRE L + GT Y+APE +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLKRREFH 185
Query: 671 SEKSDVYS 678
+E DV+S
Sbjct: 186 AEPVDVWS 193
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 28/196 (14%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKKLESIG---QGKKEFSAEVTTIGNVHHLHLVKLKGF 553
++G G FG+VY G VAVK L Q + F EV + H++++ G+
Sbjct: 17 RIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRF------NIALGMAKGLAYLHE 607
+ ++ +W S+ T+F +IA A+G+ YLH
Sbjct: 75 STKPQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 124
Query: 608 ECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR-EESLVYTTLRGTRGYLAPEWIT 666
+ I+H D+K N+ L ++ T K+ DFGLA + +R S + L G+ ++APE I
Sbjct: 125 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 181
Query: 667 ---NNPISEKSDVYSY 679
NP S +SDVY++
Sbjct: 182 MQDKNPYSFQSDVYAF 197
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 16/188 (8%)
Query: 498 LGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFC 554
LG+G +G V L + + + V + ++ + E+ ++H ++VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 555 IEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIV 614
EG + L EY G L F+ E + + G+ YLH + I
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 615 HCDIKPENVLLDDNFTAKVSDFGLAKLM---NREESLVYTTLRGTRGYLAPEWITNNPI- 670
H DIKPEN+LLD+ K+SDFGLA + NRE L + GT Y+APE +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLKRREFH 184
Query: 671 SEKSDVYS 678
+E DV+S
Sbjct: 185 AEPVDVWS 192
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 90/183 (49%), Gaps = 12/183 (6%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEG 557
+G+G FG V LG G +VAVK +++ + F AE + + + H +LV+L G +E
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 558 AHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHC 616
L + EY+ GSL ++ + L + +L + + + YL VH
Sbjct: 259 KGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 313
Query: 617 DIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDV 676
D+ NVL+ ++ AKVSDFGL K E S T + + APE + S KSDV
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 369
Query: 677 YSY 679
+S+
Sbjct: 370 WSF 372
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 28/196 (14%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKKLESIG---QGKKEFSAEVTTIGNVHHLHLVKLKGF 553
++G G FG+VY G VAVK L Q + F EV + H++++ G+
Sbjct: 42 RIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRF------NIALGMAKGLAYLHE 607
+ ++ +W S+ T+F +IA A+G+ YLH
Sbjct: 100 STKPQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 149
Query: 608 ECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR-EESLVYTTLRGTRGYLAPEWIT 666
+ I+H D+K N+ L ++ T K+ DFGLA + +R S + L G+ ++APE I
Sbjct: 150 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 206
Query: 667 ---NNPISEKSDVYSY 679
NP S +SDVY++
Sbjct: 207 MQDKNPYSFQSDVYAF 222
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 94/193 (48%), Gaps = 20/193 (10%)
Query: 497 KLGQGGFGSVYLG---MLPDGIQVAVKKLESIGQGK---KEFSAEVTTIGNVHHLHLVKL 550
+LG G FGSV G M I VA+K L+ G K +E E + + + ++V+L
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQ-GTEKADTEEMMREAQIMHQLDNPYIVRL 401
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
G C + +L E G G L K++ EE + + + ++ G+ YL E+
Sbjct: 402 IGVC-QAEALMLVMEMAGGGPLHKFLVGKREE---IPVSNVAELLHQVSMGMKYLEEK-- 455
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGT----RGYLAPEWIT 666
VH ++ NVLL + AK+SDFGL+K + ++S Y T R + APE I
Sbjct: 456 -NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS--YYTARSAGKWPLKWYAPECIN 512
Query: 667 NNPISEKSDVYSY 679
S +SDV+SY
Sbjct: 513 FRKFSSRSDVWSY 525
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 90/183 (49%), Gaps = 12/183 (6%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEG 557
+G+G FG V LG G +VAVK +++ + F AE + + + H +LV+L G +E
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVIVEE 86
Query: 558 AHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHC 616
L + EY+ GSL ++ + L + +L + + + YL VH
Sbjct: 87 KGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 141
Query: 617 DIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDV 676
D+ NVL+ ++ AKVSDFGL K E S T + + APE + S KSDV
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 197
Query: 677 YSY 679
+S+
Sbjct: 198 WSF 200
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 30/221 (13%)
Query: 474 KISGMPTRFSYDD--LCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIG---QG 528
++ + R S DD + ++G G FG+VY G VAVK L Q
Sbjct: 18 RMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQ 75
Query: 529 KKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSW 588
+ F EV + H++++ G+ + ++ +W S+
Sbjct: 76 LQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVT----------QWCEGSSLYHHLHII 125
Query: 589 NTRF------NIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM 642
T+F +IA A+G+ YLH + I+H D+K N+ L ++ T K+ DFGLA +
Sbjct: 126 ETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVK 182
Query: 643 NR-EESLVYTTLRGTRGYLAPEWIT---NNPISEKSDVYSY 679
+R S + L G+ ++APE I NP S +SDVY++
Sbjct: 183 SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 223
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 16/188 (8%)
Query: 498 LGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFC 554
LG+G +G V L + + + V + ++ + E+ ++H ++VK G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 555 IEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIV 614
EG + L EY G L F+ E + + G+ YLH + I
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 615 HCDIKPENVLLDDNFTAKVSDFGLAKLM---NREESLVYTTLRGTRGYLAPEWITNNPI- 670
H DIKPEN+LLD+ K+SDFGLA + NRE L + GT Y+APE +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLKRREFH 185
Query: 671 SEKSDVYS 678
+E DV+S
Sbjct: 186 AEPVDVWS 193
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 16/188 (8%)
Query: 498 LGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFC 554
LG+G +G V L + + + V + ++ + E+ ++H ++VK G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 555 IEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIV 614
EG + L EY G L F+ E + + G+ YLH + I
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 615 HCDIKPENVLLDDNFTAKVSDFGLAKLM---NREESLVYTTLRGTRGYLAPEWITNNPI- 670
H DIKPEN+LLD+ K+SDFGLA + NRE L + GT Y+APE +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLKRREFH 185
Query: 671 SEKSDVYS 678
+E DV+S
Sbjct: 186 AEPVDVWS 193
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 16/188 (8%)
Query: 498 LGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFC 554
LG+G +G V L + + + V + ++ + E+ ++H ++VK G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 555 IEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIV 614
EG + L EY G L F+ E + + G+ YLH + I
Sbjct: 75 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 615 HCDIKPENVLLDDNFTAKVSDFGLAKLM---NREESLVYTTLRGTRGYLAPEWITNNPI- 670
H DIKPEN+LLD+ K+SDFGLA + NRE L + GT Y+APE +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLKRREFH 185
Query: 671 SEKSDVYS 678
+E DV+S
Sbjct: 186 AEPVDVWS 193
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 90/183 (49%), Gaps = 12/183 (6%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEG 557
+G+G FG V LG G +VAVK +++ + F AE + + + H +LV+L G +E
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 558 AHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHC 616
L + EY+ GSL ++ + L + +L + + + YL VH
Sbjct: 72 KGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 126
Query: 617 DIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDV 676
D+ NVL+ ++ AKVSDFGL K E S T + + APE + S KSDV
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 182
Query: 677 YSY 679
+S+
Sbjct: 183 WSF 185
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 93/192 (48%), Gaps = 17/192 (8%)
Query: 493 NFSTKLGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLH 546
+ LG+G FG+VYL ++V K +LE G + + EV ++ H +
Sbjct: 15 DIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGV-EHQLRREVEIQSHLRHPN 73
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
+++L G+ + L EY G++ + + + SRF T I +A L+Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSRFDEQRTATYIT-ELANALSYCH 129
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWIT 666
+ +++H DIKPEN+LL N K++DFG + S TTL GT YL PE I
Sbjct: 130 SK---RVIHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIE 183
Query: 667 NNPISEKSDVYS 678
EK D++S
Sbjct: 184 GRMHDEKVDLWS 195
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 480 TRFSYDD--LCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIG---QGKKEFSA 534
+R S DD + ++G G FG+VY G VAVK L Q + F
Sbjct: 12 SRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN 69
Query: 535 EVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNI 594
EV + H++++ G+ + + ++ SL + S E++F +I
Sbjct: 70 EVGVLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHAS--ETKF-EMKKLIDI 125
Query: 595 ALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR-EESLVYTTL 653
A A+G+ YLH + I+H D+K N+ L ++ T K+ DFGLA +R S + L
Sbjct: 126 ARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQL 182
Query: 654 RGTRGYLAPEWIT---NNPISEKSDVYSY 679
G+ ++APE I +NP S +SDVY++
Sbjct: 183 SGSILWMAPEVIRMQDSNPYSFQSDVYAF 211
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 105/203 (51%), Gaps = 26/203 (12%)
Query: 493 NFSTKLGQGGFGSVYLG-MLPDGIQVAVKKL---ESIGQGK-----KEFSAEVTTIGNVH 543
+ ++G+GGFG V+ G ++ D VA+K L +S G+ + +EF EV + N++
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 544 HLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLA 603
H ++VKL G + R++ E++ G L + + + W+ + + L +A G+
Sbjct: 82 HPNIVKLYGL-MHNPPRMVM-EFVPCGDLYHRLLDKAHP---IKWSVKLRLMLDIALGIE 136
Query: 604 YLHEECEVKIVHCDIKPENVL---LDDN--FTAKVSDFGLAKLMNREESLVYTTLRGTRG 658
Y+ + IVH D++ N+ LD+N AKV+DFGL++ + + L G
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGLLGNFQ 191
Query: 659 YLAPEWI--TNNPISEKSDVYSY 679
++APE I +EK+D YS+
Sbjct: 192 WMAPETIGAEEESYTEKADTYSF 214
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 96/190 (50%), Gaps = 17/190 (8%)
Query: 498 LGQGGFGSVYLG---MLPD-GIQVAVKKLESIG---QGKKEFSAEVTTIGNVHHLHLVKL 550
LGQG FG V+L PD G A+K L+ + + E + +V+H +VKL
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 551 K-GFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
F EG L+ ++L G L ++E F + +F +A +A GL +LH
Sbjct: 96 HYAFQTEGKLYLI-LDFLRGGDL---FTRLSKEVMFTEEDVKFYLA-ELALGLDHLHS-- 148
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+ I++ D+KPEN+LLD+ K++DFGL+K E Y + GT Y+APE +
Sbjct: 149 -LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAY-SFCGTVEYMAPEVVNRQG 206
Query: 670 ISEKSDVYSY 679
S +D +SY
Sbjct: 207 HSHSADWWSY 216
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 28/196 (14%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKKLESIG---QGKKEFSAEVTTIGNVHHLHLVKLKGF 553
++G G FG+VY G VAVK L Q + F EV + H++++ G+
Sbjct: 15 RIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRF------NIALGMAKGLAYLHE 607
++ +W S+ T+F +IA A+G+ YLH
Sbjct: 73 STAPQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 608 ECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR-EESLVYTTLRGTRGYLAPEWIT 666
+ I+H D+K N+ L ++ T K+ DFGLA + +R S + L G+ ++APE I
Sbjct: 123 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 667 ---NNPISEKSDVYSY 679
NP S +SDVY++
Sbjct: 180 MQDKNPYSFQSDVYAF 195
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 15/213 (7%)
Query: 468 EDNFLEKISGMPTRFSYDDLCKATKNFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLESIG 526
++ LEK+ + S D K F K+GQG G+VY M + G +VA++++
Sbjct: 2 DEEILEKLRSI---VSVGDPKKKYTRFE-KIGQGASGTVYTAMDVATGQEVAIRQMNLQQ 57
Query: 527 QGKKEFSA-EVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
Q KKE E+ + + ++V + G + EYL GSL + + +
Sbjct: 58 QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ 117
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNRE 645
++ R + + L +LH +++H DIK +N+LL + + K++DFG + E
Sbjct: 118 IAAVCRECL-----QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169
Query: 646 ESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
+S +T+ GT ++APE +T K D++S
Sbjct: 170 QS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWS 201
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 15/193 (7%)
Query: 493 NFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLES---IGQGKKEF-SAEVTTIGNVHHLHL 547
F LG+G F +V L L + A+K LE I + K + + E + + H
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 548 VKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
VKL F + +L Y NG L K+I + F TRF A + L YLH
Sbjct: 92 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLH 146
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT-TLRGTRGYLAPEWI 665
+ I+H D+KPEN+LL+++ +++DFG AK+++ E + GT Y++PE +
Sbjct: 147 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 203
Query: 666 TNNPISEKSDVYS 678
T + SD+++
Sbjct: 204 TEKSACKSSDLWA 216
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 90/183 (49%), Gaps = 12/183 (6%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEG 557
+G+G FG V LG G +VAVK +++ + F AE + + + H +LV+L G +E
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVIVEE 77
Query: 558 AHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHC 616
L + EY+ GSL ++ + L + +L + + + YL VH
Sbjct: 78 KGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 132
Query: 617 DIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDV 676
D+ NVL+ ++ AKVSDFGL K E S T + + APE + S KSDV
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREAAFSTKSDV 188
Query: 677 YSY 679
+S+
Sbjct: 189 WSF 191
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 79
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G + K + + +E R ++ T +A L+Y H +
Sbjct: 80 GYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE------LANALSYCHSK- 132
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S TTL GT YL PE I
Sbjct: 133 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 188 HDEKVDLWS 196
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 15/193 (7%)
Query: 493 NFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLES---IGQGKKEF-SAEVTTIGNVHHLHL 547
F LG+G F +V L L + A+K LE I + K + + E + + H
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 548 VKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
VKL F + +L Y NG L K+I + F TRF A + L YLH
Sbjct: 96 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLH 150
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT-TLRGTRGYLAPEWI 665
+ I+H D+KPEN+LL+++ +++DFG AK+++ E + GT Y++PE +
Sbjct: 151 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 207
Query: 666 TNNPISEKSDVYS 678
T + SD+++
Sbjct: 208 TEKSACKSSDLWA 220
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 27/180 (15%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKL------ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
LG+G FG V L G +VA+K + +S QG+ E E++ + + H H++KL
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 78
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWI----FNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
++ EY GN D + + E RF + + Y H
Sbjct: 79 YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ---------IISAVEYCH 129
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWIT 666
KIVH D+KPEN+LLD++ K++DFGL+ +M L T G+ Y APE I+
Sbjct: 130 RH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL--KTSCGSPNYAAPEVIS 184
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 27/180 (15%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKL------ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
LG+G FG V L G +VA+K + +S QG+ E E++ + + H H++KL
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 69
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWI----FNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
++ EY GN D + + E RF + + Y H
Sbjct: 70 YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ---------IISAVEYCH 120
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWIT 666
KIVH D+KPEN+LLD++ K++DFGL+ +M L T G+ Y APE I+
Sbjct: 121 RH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL--KTSCGSPNYAAPEVIS 175
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 93/190 (48%), Gaps = 16/190 (8%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKKLESIG---QGKKEFSAEVTTIGNVHHLHLVKLKGF 553
++G G FG+VY G VAVK L Q + F EV + H++++ G+
Sbjct: 31 RIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKI 613
+ ++ SL + S E++F +IA A+G+ YLH + I
Sbjct: 89 ST-APQLAIVTQWCEGSSLYHHLHAS--ETKF-EMKKLIDIARQTARGMDYLHAKS---I 141
Query: 614 VHCDIKPENVLLDDNFTAKVSDFGLAKLMNR-EESLVYTTLRGTRGYLAPEWIT---NNP 669
+H D+K N+ L ++ T K+ DFGLA +R S + L G+ ++APE I +NP
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 670 ISEKSDVYSY 679
S +SDVY++
Sbjct: 202 YSFQSDVYAF 211
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 27/180 (15%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKL------ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
LG+G FG V L G +VA+K + +S QG+ E E++ + + H H++KL
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 79
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWI----FNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
++ EY GN D + + E RF + + Y H
Sbjct: 80 YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ---------IISAVEYCH 130
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWIT 666
KIVH D+KPEN+LLD++ K++DFGL+ +M L T G+ Y APE I+
Sbjct: 131 RH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL--KTSCGSPNYAAPEVIS 185
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 23/198 (11%)
Query: 498 LGQGGFG-SVYLGMLPDGIQVAVKKLESIGQ-GKKEFSAEVTTIGNVHHLHLVKLKGFCI 555
LG+G FG ++ + G + +K+L + ++ F EV + + H +++K G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 556 EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVH 615
+ EY+ G+L + I S + W+ R + A +A G+AYLH + I+H
Sbjct: 78 KDKRLNFITEYIKGGTL-RGIIKSMDSQ--YPWSQRVSFAKDIASGMAYLHS---MNIIH 131
Query: 616 CDIKPENVLLDDNFTAKVSDFGLAKLMNREESLV--------------YTTLRGTRGYLA 661
D+ N L+ +N V+DFGLA+LM E++ YT + G ++A
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV-GNPYWMA 190
Query: 662 PEWITNNPISEKSDVYSY 679
PE I EK DV+S+
Sbjct: 191 PEMINGRSYDEKVDVFSF 208
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 88/182 (48%), Gaps = 30/182 (16%)
Query: 498 LGQGGFGSVYLGMLP-DGIQVAVK--------KLESIGQGKKEFSAEVTTIGNVHHLHLV 548
LG G FG V +G G +VAVK L+ +G+ ++E + + H H++
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRRE----IQNLKLFRHPHII 79
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNS----TEESRFLSWNTRFNIALGMAKGLAY 604
KL + + EY+ G L +I + +ESR L F L G+ Y
Sbjct: 80 KLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRL-----FQQILS---GVDY 131
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
H +VH D+KPENVLLD + AK++DFGL+ +M+ E L + G+ Y APE
Sbjct: 132 CHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC--GSPNYAAPEV 186
Query: 665 IT 666
I+
Sbjct: 187 IS 188
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 493 NFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLES---IGQGKKEF-SAEVTTIGNVHHLHL 547
F LG+G F +V L L + A+K LE I + K + + E + + H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 548 VKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
VKL F + +L Y NG L K+I + F TRF A + L YLH
Sbjct: 93 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLH 147
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT-TLRGTRGYLAPEWI 665
+ I+H D+KPEN+LL+++ +++DFG AK+++ E GT Y++PE +
Sbjct: 148 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL 204
Query: 666 TNNPISEKSDVYS 678
T + SD+++
Sbjct: 205 TEKSACKSSDLWA 217
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 493 NFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLES---IGQGKKEF-SAEVTTIGNVHHLHL 547
F LG+G F +V L L + A+K LE I + K + + E + + H
Sbjct: 13 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 72
Query: 548 VKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
VKL F + +L Y NG L K+I + F TRF A + L YLH
Sbjct: 73 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLH 127
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT-TLRGTRGYLAPEWI 665
+ I+H D+KPEN+LL+++ +++DFG AK+++ E GT Y++PE +
Sbjct: 128 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 184
Query: 666 TNNPISEKSDVYS 678
T + SD+++
Sbjct: 185 TEKSACKSSDLWA 197
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 493 NFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLES---IGQGKKEF-SAEVTTIGNVHHLHL 547
F LG+G F +V L L + A+K LE I + K + + E + + H
Sbjct: 10 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 69
Query: 548 VKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
VKL F + +L Y NG L K+I + F TRF A + L YLH
Sbjct: 70 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLH 124
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT-TLRGTRGYLAPEWI 665
+ I+H D+KPEN+LL+++ +++DFG AK+++ E GT Y++PE +
Sbjct: 125 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 181
Query: 666 TNNPISEKSDVYS 678
T + SD+++
Sbjct: 182 TEKSACKSSDLWA 194
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 493 NFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLES---IGQGKKEF-SAEVTTIGNVHHLHL 547
F LG+G F +V L L + A+K LE I + K + + E + + H
Sbjct: 12 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 71
Query: 548 VKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
VKL F + +L Y NG L K+I + F TRF A + L YLH
Sbjct: 72 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLH 126
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT-TLRGTRGYLAPEWI 665
+ I+H D+KPEN+LL+++ +++DFG AK+++ E GT Y++PE +
Sbjct: 127 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 183
Query: 666 TNNPISEKSDVYS 678
T + SD+++
Sbjct: 184 TEKSACKSSDLWA 196
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 493 NFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLES---IGQGKKEF-SAEVTTIGNVHHLHL 547
F LG+G F +V L L + A+K LE I + K + + E + + H
Sbjct: 11 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 70
Query: 548 VKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
VKL F + +L Y NG L K+I + F TRF A + L YLH
Sbjct: 71 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLH 125
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT-TLRGTRGYLAPEWI 665
+ I+H D+KPEN+LL+++ +++DFG AK+++ E GT Y++PE +
Sbjct: 126 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 182
Query: 666 TNNPISEKSDVYS 678
T + SD+++
Sbjct: 183 TEKSACKSSDLWA 195
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 90/189 (47%), Gaps = 20/189 (10%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKK---LESIGQGKKEFSAEVTTIGNVHHLHLVKLKGF 553
++G+G FG V+ G+ QV K LE ++ E+T + ++ K G
Sbjct: 30 RIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGS 89
Query: 554 CIEGAHRLLAYEYLGNGS-LDKWIFNSTEESRFLSWNTRFNIALGMA---KGLAYLHEEC 609
++G+ + EYLG GS LD +E F IA + KGL YLH E
Sbjct: 90 YLKGSKLWIIMEYLGGGSALDLLRAGPFDE---------FQIATMLKEILKGLDYLHSE- 139
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
K +H DIK NVLL + K++DFG+A + + + T GT ++APE I +
Sbjct: 140 --KKIHRDIKAANVLLSEQGDVKLADFGVAGQLT-DTQIKRNTFVGTPFWMAPEVIQQSA 196
Query: 670 ISEKSDVYS 678
K+D++S
Sbjct: 197 YDSKADIWS 205
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 27/180 (15%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKL------ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
LG+G FG V L G +VA+K + +S QG+ E E++ + + H H++KL
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 73
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWI----FNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
++ EY GN D + + E RF + + Y H
Sbjct: 74 YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ---------IISAVEYCH 124
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWIT 666
KIVH D+KPEN+LLD++ K++DFGL+ +M L T G+ Y APE I+
Sbjct: 125 RH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL--KTSCGSPNYAAPEVIS 179
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 493 NFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLES---IGQGKKEF-SAEVTTIGNVHHLHL 547
F LG+G F +V L L + A+K LE I + K + + E + + H
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 548 VKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
VKL F + +L Y NG L K+I + F TRF A + L YLH
Sbjct: 92 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLH 146
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT-TLRGTRGYLAPEWI 665
+ I+H D+KPEN+LL+++ +++DFG AK+++ E GT Y++PE +
Sbjct: 147 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 203
Query: 666 TNNPISEKSDVYS 678
T + SD+++
Sbjct: 204 TEKSACKSSDLWA 216
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 26/197 (13%)
Query: 498 LGQGGFGSVYLGMLPDG----IQVAVKKLESIG--QGKKEFSAEVTTIGNVHHLHLVKLK 551
+G+G FG VY G D IQ A+K L I Q + F E + ++H +++ L
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 552 GFCI--EG-AHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
G + EG H LL Y + +G L ++I + R + + L +A+G+ YL E+
Sbjct: 89 GIMLPPEGLPHVLLPY--MCHGDLLQFIRSP---QRNPTVKDLISFGLQVARGMEYLAEQ 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAK-LMNREESLVYTTLRGTRGYLAPEW--- 664
K VH D+ N +LD++FT KV+DFGLA+ +++RE Y+ + L +W
Sbjct: 144 ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDRE---YYSVQQHRHARLPVKWTAL 197
Query: 665 --ITNNPISEKSDVYSY 679
+ + KSDV+S+
Sbjct: 198 ESLQTYRFTTKSDVWSF 214
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 493 NFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLES---IGQGKKEF-SAEVTTIGNVHHLHL 547
F LG+G F +V L L + A+K LE I + K + + E + + H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 548 VKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
VKL F + +L Y NG L K+I + F TRF A + L YLH
Sbjct: 95 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLH 149
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT-TLRGTRGYLAPEWI 665
+ I+H D+KPEN+LL+++ +++DFG AK+++ E GT Y++PE +
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 666 TNNPISEKSDVYS 678
T + SD+++
Sbjct: 207 TEKSAXKSSDLWA 219
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 493 NFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLES---IGQGKKEF-SAEVTTIGNVHHLHL 547
F LG+G F +V L L + A+K LE I + K + + E + + H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 548 VKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
VKL F + +L Y NG L K+I + F TRF A + L YLH
Sbjct: 93 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLH 147
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT-TLRGTRGYLAPEWI 665
+ I+H D+KPEN+LL+++ +++DFG AK+++ E GT Y++PE +
Sbjct: 148 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 666 TNNPISEKSDVYS 678
T + SD+++
Sbjct: 205 TEKSACKSSDLWA 217
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 493 NFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLES---IGQGKKEF-SAEVTTIGNVHHLHL 547
F LG+G F +V L L + A+K LE I + K + + E + + H
Sbjct: 17 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 76
Query: 548 VKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
VKL F + +L Y NG L K+I + F TRF A + L YLH
Sbjct: 77 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLH 131
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT-TLRGTRGYLAPEWI 665
+ I+H D+KPEN+LL+++ +++DFG AK+++ E GT Y++PE +
Sbjct: 132 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 188
Query: 666 TNNPISEKSDVYS 678
T + SD+++
Sbjct: 189 TEKSACKSSDLWA 201
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 104/206 (50%), Gaps = 27/206 (13%)
Query: 494 FSTKLGQGGFGSVYLGMLP-DGIQV--AVKKLESIG--QGKKEFSAEVTTIGNV-HHLHL 547
F +G+G FG V + DG+++ A+K+++ ++F+ E+ + + HH ++
Sbjct: 19 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 548 VKLKGFCIEGAHRLLAYEYLGNGSLDKW--------------IFNSTEESRFLSWNTRFN 593
+ L G C + LA EY +G+L + I NST + LS +
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST--LSSQQLLH 136
Query: 594 IALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTL 653
A +A+G+ YL ++ + +H D+ N+L+ +N+ AK++DFGL++ +E + T
Sbjct: 137 FAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMG 191
Query: 654 RGTRGYLAPEWITNNPISEKSDVYSY 679
R ++A E + + + SDV+SY
Sbjct: 192 RLPVRWMAIESLNYSVYTTNSDVWSY 217
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 493 NFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLES---IGQGKKEF-SAEVTTIGNVHHLHL 547
F LG+G F +V L L + A+K LE I + K + + E + + H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 548 VKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
VKL F + +L Y NG L K+I + F TRF A + L YLH
Sbjct: 93 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLH 147
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT-TLRGTRGYLAPEWI 665
+ I+H D+KPEN+LL+++ +++DFG AK+++ E GT Y++PE +
Sbjct: 148 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 666 TNNPISEKSDVYS 678
T + SD+++
Sbjct: 205 TEKSACKSSDLWA 217
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 493 NFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLES---IGQGKKEF-SAEVTTIGNVHHLHL 547
F LG+G F +V L L + A+K LE I + K + + E + + H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 548 VKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
VKL F + +L Y NG L K+I + F TRF A + L YLH
Sbjct: 95 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLH 149
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT-TLRGTRGYLAPEWI 665
+ I+H D+KPEN+LL+++ +++DFG AK+++ E GT Y++PE +
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 666 TNNPISEKSDVYS 678
T + SD+++
Sbjct: 207 TEKSACKSSDLWA 219
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 104/206 (50%), Gaps = 27/206 (13%)
Query: 494 FSTKLGQGGFGSVYLGMLP-DGIQV--AVKKLESIG--QGKKEFSAEVTTIGNV-HHLHL 547
F +G+G FG V + DG+++ A+K+++ ++F+ E+ + + HH ++
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 548 VKLKGFCIEGAHRLLAYEYLGNGSLDKW--------------IFNSTEESRFLSWNTRFN 593
+ L G C + LA EY +G+L + I NST + LS +
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST--LSSQQLLH 146
Query: 594 IALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTL 653
A +A+G+ YL ++ + +H D+ N+L+ +N+ AK++DFGL++ +E + T
Sbjct: 147 FAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMG 201
Query: 654 RGTRGYLAPEWITNNPISEKSDVYSY 679
R ++A E + + + SDV+SY
Sbjct: 202 RLPVRWMAIESLNYSVYTTNSDVWSY 227
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 493 NFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLES---IGQGKKEF-SAEVTTIGNVHHLHL 547
F LG+G F +V L L + A+K LE I + K + + E + + H
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 548 VKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
VKL F + +L Y NG L K+I + F TRF A + L YLH
Sbjct: 96 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLH 150
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT-TLRGTRGYLAPEWI 665
+ I+H D+KPEN+LL+++ +++DFG AK+++ E GT Y++PE +
Sbjct: 151 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 207
Query: 666 TNNPISEKSDVYS 678
T + SD+++
Sbjct: 208 TEKSACKSSDLWA 220
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 28/196 (14%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKKLESIG---QGKKEFSAEVTTIGNVHHLHLVKLKGF 553
++G G FG+VY G VAVK L Q + F EV + H++++ G+
Sbjct: 15 RIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRF------NIALGMAKGLAYLHE 607
+ ++ +W S+ T+F +IA A+G+ YLH
Sbjct: 73 STKPQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 608 ECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR-EESLVYTTLRGTRGYLAPEWIT 666
+ I+H D+K N+ L ++ T K+ DFGLA +R S + L G+ ++APE I
Sbjct: 123 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 667 ---NNPISEKSDVYSY 679
NP S +SDVY++
Sbjct: 180 MQDKNPYSFQSDVYAF 195
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 493 NFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLES---IGQGKKEF-SAEVTTIGNVHHLHL 547
F LG+G F +V L L + A+K LE I + K + + E + + H
Sbjct: 38 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 97
Query: 548 VKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
VKL F + +L Y NG L K+I + F TRF A + L YLH
Sbjct: 98 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLH 152
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT-TLRGTRGYLAPEWI 665
+ I+H D+KPEN+LL+++ +++DFG AK+++ E GT Y++PE +
Sbjct: 153 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 209
Query: 666 TNNPISEKSDVYS 678
T + SD+++
Sbjct: 210 TEKSACKSSDLWA 222
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 493 NFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLES---IGQGKKEF-SAEVTTIGNVHHLHL 547
F LG+G F +V L L + A+K LE I + K + + E + + H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 548 VKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
VKL F + +L Y NG L K+I + F TRF A + L YLH
Sbjct: 95 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLH 149
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT-TLRGTRGYLAPEWI 665
+ I+H D+KPEN+LL+++ +++DFG AK+++ E GT Y++PE +
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 666 TNNPISEKSDVYS 678
T + SD+++
Sbjct: 207 TEKSACKSSDLWA 219
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 75
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 128
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S TTL GT YL PE I
Sbjct: 129 --RVIHRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTLDYLPPEMIEGRM 183
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 184 HDEKVDLWS 192
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 493 NFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLES---IGQGKKEF-SAEVTTIGNVHHLHL 547
F LG+G F +V L L + A+K LE I + K + + E + + H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 548 VKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
VKL F + +L Y NG L K+I + F TRF A + L YLH
Sbjct: 95 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLH 149
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT-TLRGTRGYLAPEWI 665
+ I+H D+KPEN+LL+++ +++DFG AK+++ E GT Y++PE +
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 666 TNNPISEKSDVYS 678
T + SD+++
Sbjct: 207 TEKSACKSSDLWA 219
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 12/191 (6%)
Query: 494 FSTKLGQGGFGSVYL-GMLPDGIQVAVKKL--ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
F KLG G FG V+L G++ +K + + ++ AE+ + ++ H +++K+
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
+ + + E G L + I ++ + LS + M LAY H +
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ-- 143
Query: 611 VKIVHCDIKPENVLLDD---NFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
+VH D+KPEN+L D + K+ DFGLA+L +E T GT Y+APE
Sbjct: 144 -HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH--STNAAGTALYMAPEVFKR 200
Query: 668 NPISEKSDVYS 678
+ ++ K D++S
Sbjct: 201 D-VTFKCDIWS 210
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 28/196 (14%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKKLESIG---QGKKEFSAEVTTIGNVHHLHLVKLKGF 553
++G G FG+VY G VAVK L Q + F EV + H++++ G+
Sbjct: 35 RIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRF------NIALGMAKGLAYLHE 607
+ ++ +W S+ T+F +IA A+G+ YLH
Sbjct: 93 STKPQLAIVT----------QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 142
Query: 608 ECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR-EESLVYTTLRGTRGYLAPEWIT 666
+ I+H D+K N+ L ++ T K+ DFGLA +R S + L G+ ++APE I
Sbjct: 143 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 199
Query: 667 ---NNPISEKSDVYSY 679
NP S +SDVY++
Sbjct: 200 MQDKNPYSFQSDVYAF 215
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 493 NFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLES---IGQGKKEF-SAEVTTIGNVHHLHL 547
F LG+G F +V L L + A+K LE I + K + + E + + H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 548 VKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
VKL F + +L Y NG L K+I + F TRF A + L YLH
Sbjct: 95 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLH 149
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT-TLRGTRGYLAPEWI 665
+ I+H D+KPEN+LL+++ +++DFG AK+++ E GT Y++PE +
Sbjct: 150 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
Query: 666 TNNPISEKSDVYS 678
T + SD+++
Sbjct: 207 TEKSACKSSDLWA 219
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 85/192 (44%), Gaps = 15/192 (7%)
Query: 493 NFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFSAE--VTTIGNVHHLHLVK 549
F LG G F V L G AVK + KE S E + + + H ++V
Sbjct: 25 EFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVA 84
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
L+ H L + + G L F+ E F + + + + YLH
Sbjct: 85 LEDIYESPNHLYLVMQLVSGGEL----FDRIVEKGFYTEKDASTLIRQVLDAVYYLHR-- 138
Query: 610 EVKIVHCDIKPENVLL---DDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWIT 666
+ IVH D+KPEN+L D+ +SDFGL+K+ + + V +T GT GY+APE +
Sbjct: 139 -MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD--VMSTACGTPGYVAPEVLA 195
Query: 667 NNPISEKSDVYS 678
P S+ D +S
Sbjct: 196 QKPYSKAVDCWS 207
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 99/221 (44%), Gaps = 30/221 (13%)
Query: 474 KISGMPTRFSYDD--LCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIG---QG 528
++ + R S DD + ++G G FG+VY G VAVK L Q
Sbjct: 18 RMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQ 75
Query: 529 KKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSW 588
+ F EV + H++++ G+ + ++ +W S+
Sbjct: 76 LQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVT----------QWCEGSSLYHHLHII 125
Query: 589 NTRF------NIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM 642
T+F +IA A+G+ YLH + I+H D+K N+ L ++ T K+ DFGLA
Sbjct: 126 ETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEK 182
Query: 643 NR-EESLVYTTLRGTRGYLAPEWIT---NNPISEKSDVYSY 679
+R S + L G+ ++APE I NP S +SDVY++
Sbjct: 183 SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 223
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 13/188 (6%)
Query: 498 LGQGGFGSVYLGMLP----DGIQVAVK--KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG VY G+ + I VAVK K + K++F +E + N+ H H+VKL
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
G IE + E G L ++ + + L T +L + K +AYL +
Sbjct: 76 GI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLES---I 128
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPIS 671
VH DI N+L+ K+ DFGL++ + E+ + R +++PE I +
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 188
Query: 672 EKSDVYSY 679
SDV+ +
Sbjct: 189 TASDVWMF 196
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 85/188 (45%), Gaps = 16/188 (8%)
Query: 498 LGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFC 554
LG+G G V L + + + V + ++ + E+ ++H ++VK G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 555 IEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIV 614
EG + L EY G L F+ E + + G+ YLH + I
Sbjct: 74 REGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 615 HCDIKPENVLLDDNFTAKVSDFGLAKLM---NREESLVYTTLRGTRGYLAPEWITNNPI- 670
H DIKPEN+LLD+ K+SDFGLA + NRE L + GT Y+APE +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL--NKMCGTLPYVAPELLKRREFH 184
Query: 671 SEKSDVYS 678
+E DV+S
Sbjct: 185 AEPVDVWS 192
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 13/188 (6%)
Query: 498 LGQGGFGSVYLGMLP----DGIQVAVK--KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG VY G+ + I VAVK K + K++F +E + N+ H H+VKL
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
G IE + E G L ++ + + L T +L + K +AYL +
Sbjct: 92 GI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLES---I 144
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPIS 671
VH DI N+L+ K+ DFGL++ + E+ + R +++PE I +
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 204
Query: 672 EKSDVYSY 679
SDV+ +
Sbjct: 205 TASDVWMF 212
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 88/188 (46%), Gaps = 13/188 (6%)
Query: 498 LGQGGFGSVYLGMLP----DGIQVAVK--KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG VY G+ + I VAVK K + K++F +E + N+ H H+VKL
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
G IE + E G L ++ + + L T +L + K +AYL +
Sbjct: 80 GI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLES---I 132
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPIS 671
VH DI N+L+ K+ DFGL++ + E+ + R +++PE I +
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 192
Query: 672 EKSDVYSY 679
SDV+ +
Sbjct: 193 TASDVWMF 200
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 9/189 (4%)
Query: 498 LGQGGFGSVY-LGMLPDGIQVAVKKLE--SIGQGKKE-FSAEVTTIGNVHHLHLVKLKGF 553
+G G +G + DG + K+L+ S+ + +K+ +EV + + H ++V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 554 CIEGAHRLL--AYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE- 610
I+ + L EY G L I T+E ++L + + L H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 611 -VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
++H D+KP NV LD K+ DFGLA+++N + S T GT Y++PE +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA-KTFVGTPYYMSPEQMNRMS 192
Query: 670 ISEKSDVYS 678
+EKSD++S
Sbjct: 193 YNEKSDIWS 201
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 95/188 (50%), Gaps = 12/188 (6%)
Query: 493 NFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFS-AEVTTIGNVHHLHLVKL 550
NF K+G+G G V + G QVAVKK++ Q ++E EV + + HH ++V +
Sbjct: 49 NF-IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDM 107
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
+ G + E+L G+L + ++ ++ + L + + L+YLH +
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----TVCLSVLRALSYLHNQG- 161
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPI 670
++H DIK +++LL + K+SDFG +++E L GT ++APE I+ P
Sbjct: 162 --VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP-KRKXLVGTPYWMAPEVISRLPY 218
Query: 671 SEKSDVYS 678
+ D++S
Sbjct: 219 GTEVDIWS 226
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 26/213 (12%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQ------VAVKKLESIGQGKK--EFSAEVT 537
++ + S +LGQG FG VY G+ ++ VA+K + ++ EF E +
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 538 TIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFN---STEESRFL---SWNTR 591
+ + H+V+L G +G L+ E + G L ++ + E + L S +
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 592 FNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT 651
+A +A G+AYL+ K VH D+ N ++ ++FT K+ DFG M R+
Sbjct: 135 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIXETDX 187
Query: 652 TLRGTRGYLAPEWITNNPISEK-----SDVYSY 679
+G +G L W++ + + SDV+S+
Sbjct: 188 XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 220
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 74
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 127
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S TTL GT YL PE I
Sbjct: 128 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 182
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 183 HDEKVDLWS 191
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 77
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 130
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S TTL GT YL PE I
Sbjct: 131 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 186 HDEKVDLWS 194
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 26/202 (12%)
Query: 497 KLGQGGFGSVYLGMLPDGIQ------VAVKKLESIG--QGKKEFSAEVTTIGNVHHLHLV 548
+LGQG FG VY G D I+ VAVK + + + EF E + + H+V
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESR------FLSWNTRFNIALGMAKGL 602
+L G +G L+ E + +G L ++ + E+ + +A +A G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRG---- 658
AYL+ + K VH D+ N ++ +FT K+ DFG M R+ +G +G
Sbjct: 141 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIXETDXXRKGGKGLLPV 193
Query: 659 -YLAPEWITNNPISEKSDVYSY 679
++APE + + + SD++S+
Sbjct: 194 RWMAPESLKDGVFTTSSDMWSF 215
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 26/202 (12%)
Query: 497 KLGQGGFGSVYLGMLPDGIQ------VAVKKLESIG--QGKKEFSAEVTTIGNVHHLHLV 548
+LGQG FG VY G D I+ VAVK + + + EF E + + H+V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESR------FLSWNTRFNIALGMAKGL 602
+L G +G L+ E + +G L ++ + E+ + +A +A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRG---- 658
AYL+ + K VH D+ N ++ +FT K+ DFG M R+ +G +G
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIXETDXXRKGGKGLLPV 196
Query: 659 -YLAPEWITNNPISEKSDVYSY 679
++APE + + + SD++S+
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSF 218
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 26/202 (12%)
Query: 497 KLGQGGFGSVYLGMLPDGIQ------VAVKKLESIG--QGKKEFSAEVTTIGNVHHLHLV 548
+LGQG FG VY G D I+ VAVK + + + EF E + + H+V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESR------FLSWNTRFNIALGMAKGL 602
+L G +G L+ E + +G L ++ + E+ + +A +A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRG---- 658
AYL+ + K VH D+ N ++ +FT K+ DFG M R+ +G +G
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIXETDXXRKGGKGLLPV 196
Query: 659 -YLAPEWITNNPISEKSDVYSY 679
++APE + + + SD++S+
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSF 218
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 92/192 (47%), Gaps = 17/192 (8%)
Query: 493 NFSTKLGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLH 546
+ LG+G FG+VYL ++V K +LE G + + EV ++ H +
Sbjct: 15 DIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGV-EHQLRREVEIQSHLRHPN 73
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
+++L G+ + L EY G++ + + + SRF T I +A L+Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYREL---QKLSRFDEQRTATYIT-ELANALSYCH 129
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWIT 666
+ +++H DIKPEN+LL N K++DFG + S TL GT YL PE I
Sbjct: 130 SK---RVIHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRDTLCGTLDYLPPEMIE 183
Query: 667 NNPISEKSDVYS 678
EK D++S
Sbjct: 184 GRMHDEKVDLWS 195
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 15/215 (6%)
Query: 466 LEEDNFLEKISGMPTRFSYDDLCKATKNFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLES 524
+ ++ LEK+ + S D K F K+GQG G+VY M + G +VA++++
Sbjct: 1 MSDEEILEKLRSI---VSVGDPKKKYTRFE-KIGQGASGTVYTAMDVATGQEVAIRQMNL 56
Query: 525 IGQGKKEFSA-EVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEES 583
Q KKE E+ + + ++V + G + EYL GSL + + +
Sbjct: 57 QQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE 116
Query: 584 RFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMN 643
++ R + + L +LH +++H DIK +N+LL + + K++DFG +
Sbjct: 117 GQIAAVCRECL-----QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 168
Query: 644 REESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
E+S + + GT ++APE +T K D++S
Sbjct: 169 PEQS-KRSXMVGTPYWMAPEVVTRKAYGPKVDIWS 202
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 79
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 132
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S TTL GT YL PE I
Sbjct: 133 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 188 HDEKVDLWS 196
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLY 91
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 92 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 144
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S TTL GT YL PE I
Sbjct: 145 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 199
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 200 HDEKVDLWS 208
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 15/213 (7%)
Query: 468 EDNFLEKISGMPTRFSYDDLCKATKNFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLESIG 526
++ LEK+ + S D K F K+GQG G+VY M + G +VA++++
Sbjct: 2 DEEILEKLRSI---VSVGDPKKKYTRFE-KIGQGASGTVYTAMDVATGQEVAIRQMNLQQ 57
Query: 527 QGKKEFSA-EVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
Q KKE E+ + + ++V + G + EYL GSL + + +
Sbjct: 58 QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ 117
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNRE 645
++ R + + L +LH +++H DIK +N+LL + + K++DFG + E
Sbjct: 118 IAAVCRECL-----QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169
Query: 646 ESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
+S + + GT ++APE +T K D++S
Sbjct: 170 QS-KRSXMVGTPYWMAPEVVTRKAYGPKVDIWS 201
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 26/213 (12%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQ------VAVKKLESIGQGKK--EFSAEVT 537
++ + S +LGQG FG VY G+ ++ VA+K + ++ EF E +
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 65
Query: 538 TIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFN---STEESRFL---SWNTR 591
+ + H+V+L G +G L+ E + G L ++ + E + L S +
Sbjct: 66 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 125
Query: 592 FNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT 651
+A +A G+AYL+ K VH D+ N ++ ++FT K+ DFG M R+
Sbjct: 126 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIXETDX 178
Query: 652 TLRGTRGYLAPEWITNNPISEK-----SDVYSY 679
+G +G L W++ + + SDV+S+
Sbjct: 179 XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 211
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 79
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 132
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S TTL GT YL PE I
Sbjct: 133 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEXIEGRX 187
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 188 HDEKVDLWS 196
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 104/203 (51%), Gaps = 26/203 (12%)
Query: 493 NFSTKLGQGGFGSVYLG-MLPDGIQVAVKKL---ESIGQGK-----KEFSAEVTTIGNVH 543
+ ++G+GGFG V+ G ++ D VA+K L +S G+ + +EF EV + N++
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 544 HLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLA 603
H ++VKL G + R++ E++ G L + + + W+ + + L +A G+
Sbjct: 82 HPNIVKLYGL-MHNPPRMVM-EFVPCGDLYHRLLDKAHP---IKWSVKLRLMLDIALGIE 136
Query: 604 YLHEECEVKIVHCDIKPENVL---LDDN--FTAKVSDFGLAKLMNREESLVYTTLRGTRG 658
Y+ + IVH D++ N+ LD+N AKV+DFG ++ + + L G
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGLLGNFQ 191
Query: 659 YLAPEWI--TNNPISEKSDVYSY 679
++APE I +EK+D YS+
Sbjct: 192 WMAPETIGAEEESYTEKADTYSF 214
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLY 100
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 101 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 153
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S TTL GT YL PE I
Sbjct: 154 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 208
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 209 HDEKVDLWS 217
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 104/203 (51%), Gaps = 26/203 (12%)
Query: 493 NFSTKLGQGGFGSVYLG-MLPDGIQVAVKKL---ESIGQGK-----KEFSAEVTTIGNVH 543
+ ++G+GGFG V+ G ++ D VA+K L +S G+ + +EF EV + N++
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 544 HLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLA 603
H ++VKL G + R++ E++ G L + + + W+ + + L +A G+
Sbjct: 82 HPNIVKLYGL-MHNPPRMVM-EFVPCGDLYHRLLDKAHP---IKWSVKLRLMLDIALGIE 136
Query: 604 YLHEECEVKIVHCDIKPENVL---LDDN--FTAKVSDFGLAKLMNREESLVYTTLRGTRG 658
Y+ + IVH D++ N+ LD+N AKV+DF L++ + + L G
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGLLGNFQ 191
Query: 659 YLAPEWI--TNNPISEKSDVYSY 679
++APE I +EK+D YS+
Sbjct: 192 WMAPETIGAEEESYTEKADTYSF 214
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 14/186 (7%)
Query: 497 KLGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGF 553
K+G+G FG V+ G+ + + + LE ++ E+T + ++ K G
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 73
Query: 554 CIEGAHRLLAYEYLGNGS-LDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
++ + EYLG GS LD +E++ + I + KGL YLH E K
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIAT------ILREILKGLDYLHSE---K 124
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISE 672
+H DIK NVLL ++ K++DFG+A + + + T GT ++APE I +
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNTFVGTPFWMAPEVIKQSAYDS 183
Query: 673 KSDVYS 678
K+D++S
Sbjct: 184 KADIWS 189
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 15/213 (7%)
Query: 468 EDNFLEKISGMPTRFSYDDLCKATKNFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLESIG 526
++ LEK+ + S D K F K+GQG G+VY M + G +VA++++
Sbjct: 2 DEEILEKLRSI---VSVGDPKKKYTRFE-KIGQGASGTVYTAMDVATGQEVAIRQMNLQQ 57
Query: 527 QGKKEFSA-EVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
Q KKE E+ + + ++V + G + EYL GSL + + +
Sbjct: 58 QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ 117
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNRE 645
++ R + + L +LH +++H DIK +N+LL + + K++DFG + E
Sbjct: 118 IAAVCRECL-----QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169
Query: 646 ESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
+S + + GT ++APE +T K D++S
Sbjct: 170 QS-KRSEMVGTPYWMAPEVVTRKAYGPKVDIWS 201
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 78
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 79 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 131
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S TTL GT YL PE I
Sbjct: 132 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 186
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 187 HDEKVDLWS 195
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 73
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 74 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 126
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S TTL GT YL PE I
Sbjct: 127 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 181
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 182 HDEKVDLWS 190
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 77
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 130
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S TTL GT YL PE I
Sbjct: 131 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 186 HDEKVDLWS 194
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 14/186 (7%)
Query: 497 KLGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGF 553
K+G+G FG V+ G+ + + + LE ++ E+T + ++ K G
Sbjct: 34 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 93
Query: 554 CIEGAHRLLAYEYLGNGS-LDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
++ + EYLG GS LD +E++ + I + KGL YLH E K
Sbjct: 94 YLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIAT------ILREILKGLDYLHSE---K 144
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISE 672
+H DIK NVLL ++ K++DFG+A + + + T GT ++APE I +
Sbjct: 145 KIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNTFVGTPFWMAPEVIKQSAYDS 203
Query: 673 KSDVYS 678
K+D++S
Sbjct: 204 KADIWS 209
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 71
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 72 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 124
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S TTL GT YL PE I
Sbjct: 125 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 179
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 180 HDEKVDLWS 188
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 497 KLGQGGFGSVYLGMLPDGIQ------VAVKKLESIG--QGKKEFSAEVTTIGNVHHLHLV 548
+LGQG FG VY G D I+ VAVK + + + EF E + + H+V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESR------FLSWNTRFNIALGMAKGL 602
+L G +G L+ E + +G L ++ + E+ + +A +A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRG---- 658
AYL+ + K VH D+ N ++ +FT K+ DFG+ + + E+ Y +G +G
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--DIYETAYYR--KGGKGLLPV 196
Query: 659 -YLAPEWITNNPISEKSDVYSY 679
++APE + + + SD++S+
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSF 218
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 15/193 (7%)
Query: 493 NFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLES---IGQGKKEF-SAEVTTIGNVHHLHL 547
F LG+G F + L L + A+K LE I + K + + E + + H
Sbjct: 33 KFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 548 VKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
VKL F + +L Y NG L K+I + F TRF A + L YLH
Sbjct: 93 VKLY-FTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLH 147
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT-TLRGTRGYLAPEWI 665
+ I+H D+KPEN+LL+++ +++DFG AK+++ E GT Y++PE +
Sbjct: 148 GKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
Query: 666 TNNPISEKSDVYS 678
T + SD+++
Sbjct: 205 TEKSACKSSDLWA 217
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 14/201 (6%)
Query: 483 SYDDLCKATKNFSTKLGQGGFGSVYLG-MLPDGIQVAVKKLE--SIGQGKKEFSAEVTTI 539
YD+L K + T +G GGF V L + G VA+K ++ ++G E+ +
Sbjct: 4 DYDELLKYYELHET-IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEAL 62
Query: 540 GNVHHLHLVKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGM 598
N+ H H+ +L +E A+++ + EY G L +I + + R TR + +
Sbjct: 63 KNLRHQHICQLY-HVLETANKIFMVLEYCPGGELFDYIIS---QDRLSEEETRV-VFRQI 117
Query: 599 AKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRG 658
+AY+H + H D+KPEN+L D+ K+ DFGL + T G+
Sbjct: 118 VSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLA 174
Query: 659 YLAPEWITNNP-ISEKSDVYS 678
Y APE I + ++DV+S
Sbjct: 175 YAAPELIQGKSYLGSEADVWS 195
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 77/173 (44%), Gaps = 15/173 (8%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKK-----EFSAEVTTIGNVHHLHLVKLKG 552
LG+G FG V L Q K S KK E++ + + H H++KL
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
++ EY G G L F+ E + ++ + + + Y H K
Sbjct: 77 VITTPTDIVMVIEYAG-GEL----FDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---K 128
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
IVH D+KPEN+LLDDN K++DFGL+ +M L T G+ Y APE I
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFL--KTSCGSPNYAAPEVI 179
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQ------VAVKKLESIGQGKK--EFSAEVT 537
++ + S +LGQG FG VY G+ ++ VA+K + ++ EF E +
Sbjct: 12 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 71
Query: 538 TIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFN---STEESRFL---SWNTR 591
+ + H+V+L G +G L+ E + G L ++ + E + L S +
Sbjct: 72 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 131
Query: 592 FNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT 651
+A +A G+AYL+ K VH D+ N ++ ++FT K+ DFG M R+ +Y
Sbjct: 132 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRD---IYE 181
Query: 652 T---LRGTRGYLAPEWITNNPISEK-----SDVYSY 679
T +G +G L W++ + + SDV+S+
Sbjct: 182 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 217
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 20/200 (10%)
Query: 493 NFSTKLGQGGFGSVYLGMLPD-GIQVAVK--KLESIGQGKKEFSAEVTTIGNVHHLHLVK 549
+LG GGFG V + D G QVA+K + E + ++ + E+ + ++H ++V
Sbjct: 18 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 77
Query: 550 LKGFCIEGAHRL-------LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
+ +G +L LA EY G L K++ N E L + ++ L
Sbjct: 78 AREVP-DGLQKLAPNDLPLLAMEYCEGGDLRKYL-NQFENCCGLKEGPIRTLLSDISSAL 135
Query: 603 AYLHEECEVKIVHCDIKPENVLLD---DNFTAKVSDFGLAKLMNREESLVYTTLRGTRGY 659
YLHE +I+H D+KPEN++L K+ D G AK +++ E + T GT Y
Sbjct: 136 RYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQY 190
Query: 660 LAPEWITNNPISEKSDVYSY 679
LAPE + + D +S+
Sbjct: 191 LAPELLEQKKYTVTVDYWSF 210
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 104/206 (50%), Gaps = 27/206 (13%)
Query: 494 FSTKLGQGGFGSVYLGMLP-DGIQV--AVKKLESIG--QGKKEFSAEVTTIGNV-HHLHL 547
F +G+G FG V + DG+++ A+K+++ ++F+ E+ + + HH ++
Sbjct: 26 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 548 VKLKGFCIEGAHRLLAYEYLGNGSLDKW--------------IFNSTEESRFLSWNTRFN 593
+ L G C + LA EY +G+L + I NST + LS +
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST--LSSQQLLH 143
Query: 594 IALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTL 653
A +A+G+ YL ++ + +H ++ N+L+ +N+ AK++DFGL++ +E + T
Sbjct: 144 FAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMG 198
Query: 654 RGTRGYLAPEWITNNPISEKSDVYSY 679
R ++A E + + + SDV+SY
Sbjct: 199 RLPVRWMAIESLNYSVYTTNSDVWSY 224
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQ------VAVKKLESIGQGKK--EFSAEVT 537
++ + S +LGQG FG VY G+ ++ VA+K + ++ EF E +
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 538 TIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFN---STEESRFL---SWNTR 591
+ + H+V+L G +G L+ E + G L ++ + E + L S +
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 592 FNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT 651
+A +A G+AYL+ K VH D+ N ++ ++FT K+ DFG M R+ +Y
Sbjct: 134 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRD---IYE 183
Query: 652 T---LRGTRGYLAPEWITNNPISEK-----SDVYSY 679
T +G +G L W++ + + SDV+S+
Sbjct: 184 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 219
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 9/189 (4%)
Query: 498 LGQGGFGSVY-LGMLPDGIQVAVKKLE--SIGQGKKE-FSAEVTTIGNVHHLHLVKLKGF 553
+G G +G + DG + K+L+ S+ + +K+ +EV + + H ++V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 554 CIEGAHRLL--AYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE- 610
I+ + L EY G L I T+E ++L + + L H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 611 -VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
++H D+KP NV LD K+ DFGLA+++N +E GT Y++PE +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFA-KEFVGTPYYMSPEQMNRMS 192
Query: 670 ISEKSDVYS 678
+EKSD++S
Sbjct: 193 YNEKSDIWS 201
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 12/186 (6%)
Query: 498 LGQGGFGSVYLG-MLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVH----HLHLVKLKG 552
LG+G F VY + G++VA+K ++ K V +H H +++L
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
+ + + L E NG +++++ N + S N + + G+ YLH
Sbjct: 79 YFEDSNYVYLVLEMCHNGEMNRYLKNRVKP---FSENEARHFMHQIITGMLYLHSH---G 132
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISE 672
I+H D+ N+LL N K++DFGLA + Y TL GT Y++PE T +
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY-TLCGTPNYISPEIATRSAHGL 191
Query: 673 KSDVYS 678
+SDV+S
Sbjct: 192 ESDVWS 197
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 20/200 (10%)
Query: 493 NFSTKLGQGGFGSVYLGMLPD-GIQVAVK--KLESIGQGKKEFSAEVTTIGNVHHLHLVK 549
+LG GGFG V + D G QVA+K + E + ++ + E+ + ++H ++V
Sbjct: 17 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 76
Query: 550 LKGFCIEGAHRL-------LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
+ +G +L LA EY G L K++ N E L + ++ L
Sbjct: 77 AREVP-DGLQKLAPNDLPLLAMEYCEGGDLRKYL-NQFENCCGLKEGPIRTLLSDISSAL 134
Query: 603 AYLHEECEVKIVHCDIKPENVLLD---DNFTAKVSDFGLAKLMNREESLVYTTLRGTRGY 659
YLHE +I+H D+KPEN++L K+ D G AK +++ E + T GT Y
Sbjct: 135 RYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE--LCTEFVGTLQY 189
Query: 660 LAPEWITNNPISEKSDVYSY 679
LAPE + + D +S+
Sbjct: 190 LAPELLEQKKYTVTVDYWSF 209
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 32/216 (14%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQ------VAVKKLESIGQGKK--EFSAEVT 537
++ + S +LGQG FG VY G+ ++ VA+K + ++ EF E +
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 538 TIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFN---STEESRFL---SWNTR 591
+ + H+V+L G +G L+ E + G L ++ + E + L S +
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 592 FNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT 651
+A +A G+AYL+ K VH D+ N ++ ++FT K+ DFG M R+ +Y
Sbjct: 135 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRD---IYE 184
Query: 652 T---LRGTRG-----YLAPEWITNNPISEKSDVYSY 679
T +G +G +++PE + + + SDV+S+
Sbjct: 185 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 220
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQ------VAVKKLESIGQGKK--EFSAEVT 537
++ + S +LGQG FG VY G+ ++ VA+K + ++ EF E +
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 538 TIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFN---STEESRFL---SWNTR 591
+ + H+V+L G +G L+ E + G L ++ + E + L S +
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 140
Query: 592 FNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT 651
+A +A G+AYL+ K VH D+ N ++ ++FT K+ DFG M R+ +Y
Sbjct: 141 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRD---IYE 190
Query: 652 T---LRGTRGYLAPEWITNNPISEK-----SDVYSY 679
T +G +G L W++ + + SDV+S+
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 226
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 12/186 (6%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSA--EVTTIGNVHHLHLVKLKGFC 554
+LG G FG V+ + +V V K + +++ E++ + +HH L+ L
Sbjct: 58 ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 117
Query: 555 IEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIV 614
+ +L E+L G L I E +S N +GL ++HE IV
Sbjct: 118 EDKYEMVLILEFLSGGELFDRI---AAEDYKMSEAEVINYMRQACEGLKHMHEHS---IV 171
Query: 615 HCDIKPENVLLDDN--FTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISE 672
H DIKPEN++ + + K+ DFGLA +N +E + TT T + APE + P+
Sbjct: 172 HLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT--ATAEFAAPEIVDREPVGF 229
Query: 673 KSDVYS 678
+D+++
Sbjct: 230 YTDMWA 235
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQ------VAVKKLESIGQGKK--EFSAEVT 537
++ + S +LGQG FG VY G+ ++ VA+K + ++ EF E +
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 538 TIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFN---STEESRFL---SWNTR 591
+ + H+V+L G +G L+ E + G L ++ + E + L S +
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 592 FNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT 651
+A +A G+AYL+ K VH D+ N ++ ++FT K+ DFG M R+ +Y
Sbjct: 128 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRD---IYE 177
Query: 652 T---LRGTRGYLAPEWITNNPISEK-----SDVYSY 679
T +G +G L W++ + + SDV+S+
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 213
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQ------VAVKKLESIGQGKK--EFSAEVT 537
++ + S +LGQG FG VY G+ ++ VA+K + ++ EF E +
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 538 TIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFN---STEESRFL---SWNTR 591
+ + H+V+L G +G L+ E + G L ++ + E + L S +
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 592 FNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT 651
+A +A G+AYL+ K VH D+ N ++ ++FT K+ DFG M R+ +Y
Sbjct: 134 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRD---IYE 183
Query: 652 T---LRGTRGYLAPEWITNNPISEK-----SDVYSY 679
T +G +G L W++ + + SDV+S+
Sbjct: 184 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 219
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 104/215 (48%), Gaps = 15/215 (6%)
Query: 466 LEEDNFLEKISGMPTRFSYDDLCKATKNFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLES 524
+ ++ LEK+ + S D K F K+GQG G+VY M + G +VA++++
Sbjct: 1 MSDEEILEKLRII---VSVGDPKKKYTRFE-KIGQGASGTVYTAMDVATGQEVAIRQMNL 56
Query: 525 IGQGKKEFSA-EVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEES 583
Q KKE E+ + + ++V + G + EYL GSL + + +
Sbjct: 57 QQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE 116
Query: 584 RFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMN 643
++ R + + L +LH +++H +IK +N+LL + + K++DFG +
Sbjct: 117 GQIAAVCRECL-----QALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQIT 168
Query: 644 REESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
E+S +T+ GT ++APE +T K D++S
Sbjct: 169 PEQS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWS 202
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQ------VAVKKLESIGQGKK--EFSAEVT 537
++ + S +LGQG FG VY G+ ++ VA+K + ++ EF E +
Sbjct: 43 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 102
Query: 538 TIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFN---STEESRFL---SWNTR 591
+ + H+V+L G +G L+ E + G L ++ + E + L S +
Sbjct: 103 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 162
Query: 592 FNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT 651
+A +A G+AYL+ K VH D+ N ++ ++FT K+ DFG M R+ +Y
Sbjct: 163 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRD---IYE 212
Query: 652 T---LRGTRGYLAPEWITNNPISEK-----SDVYSY 679
T +G +G L W++ + + SDV+S+
Sbjct: 213 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 248
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 32/211 (15%)
Query: 498 LGQGGFGSV------YLGMLPDGIQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVK 549
LG+G FG V +L VAVK L+ ++ +E + V+H H++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTE--------------------ESRFLSWN 589
L G C + LL EY GSL ++ S + + R L+
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 590 TRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLV 649
+ A +++G+ YL E+K+VH D+ N+L+ + K+SDFGL++ + E+S V
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 650 YTTL-RGTRGYLAPEWITNNPISEKSDVYSY 679
+ R ++A E + ++ + +SDV+S+
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 32/205 (15%)
Query: 497 KLGQGGFGSVYLGMLPDGIQ------VAVKKLESIG--QGKKEFSAEVTTIGNVHHLHLV 548
+LGQG FG VY G D I+ VAVK + + + EF E + + H+V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESR------FLSWNTRFNIALGMAKGL 602
+L G +G L+ E + +G L ++ + E+ + +A +A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT---LRGTRG- 658
AYL+ + K VH D+ N ++ +FT K+ DFG M R+ +Y T +G +G
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFG----MTRD---IYETDYYRKGGKGL 193
Query: 659 ----YLAPEWITNNPISEKSDVYSY 679
++APE + + + SD++S+
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSF 218
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 79
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G + K + + +E R ++ T +A L+Y H +
Sbjct: 80 GYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE------LANALSYCHSK- 132
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S L GT YL PE I
Sbjct: 133 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLXGTLDYLPPEMIEGRM 187
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 188 HDEKVDLWS 196
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 9/189 (4%)
Query: 498 LGQGGFGSVY-LGMLPDGIQVAVKKLE--SIGQGKKE-FSAEVTTIGNVHHLHLVKLKGF 553
+G G +G + DG + K+L+ S+ + +K+ +EV + + H ++V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 554 CIEGAHRLL--AYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE- 610
I+ + L EY G L I T+E ++L + + L H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 611 -VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
++H D+KP NV LD K+ DFGLA+++N + S GT Y++PE +
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA-KAFVGTPYYMSPEQMNRMS 192
Query: 670 ISEKSDVYS 678
+EKSD++S
Sbjct: 193 YNEKSDIWS 201
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 32/205 (15%)
Query: 497 KLGQGGFGSVYLGMLPDGIQ------VAVKKLESIG--QGKKEFSAEVTTIGNVHHLHLV 548
+LGQG FG VY G D I+ VAVK + + + EF E + + H+V
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESR------FLSWNTRFNIALGMAKGL 602
+L G +G L+ E + +G L ++ + E+ + +A +A G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT---LRGTRG- 658
AYL+ + K VH D+ N ++ +FT K+ DFG M R+ +Y T +G +G
Sbjct: 143 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFG----MTRD---IYETDYYRKGGKGL 192
Query: 659 ----YLAPEWITNNPISEKSDVYSY 679
++APE + + + SD++S+
Sbjct: 193 LPVRWMAPESLKDGVFTTSSDMWSF 217
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 32/211 (15%)
Query: 498 LGQGGFGSV------YLGMLPDGIQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVK 549
LG+G FG V +L VAVK L+ ++ +E + V+H H++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTE--------------------ESRFLSWN 589
L G C + LL EY GSL ++ S + + R L+
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 590 TRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLV 649
+ A +++G+ YL E+K+VH D+ N+L+ + K+SDFGL++ + E+S V
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 650 YTTL-RGTRGYLAPEWITNNPISEKSDVYSY 679
+ R ++A E + ++ + +SDV+S+
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 16/194 (8%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
++ + + KLG G FG V++ +VAVK ++ + F AE + + H
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 237
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
LVKL + ++ E++ GSL F ++E + + +A+G+A++
Sbjct: 238 KLVKLHAVVTKEPIYIIT-EFMAKGSLLD--FLKSDEGSKQPLPKLIDFSAQIAEGMAFI 294
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+ +H D++ N+L+ + K++DFGLA++ + + APE I
Sbjct: 295 EQR---NYIHRDLRAANILVSASLVCKIADFGLARV----------GAKFPIKWTAPEAI 341
Query: 666 TNNPISEKSDVYSY 679
+ KSDV+S+
Sbjct: 342 NFGSFTIKSDVWSF 355
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 89/193 (46%), Gaps = 19/193 (9%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVKKLESIG--QGKKEFSAEVTTIGNVHHLHLVKL 550
LG+G FG V L G VAVK L++ Q + + E+ + ++H H++K
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 551 KGFCIE-GAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
KG C + GA L L EY+ GSL ++ + + A + +G+AYLH +
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS-----IGLAQLLLFAQQICEGMAYLHAQ 153
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRG--YLAPEWIT 666
+H D+ NVLLD++ K+ DFGLAK + G + APE +
Sbjct: 154 ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLK 210
Query: 667 NNPISEKSDVYSY 679
SDV+S+
Sbjct: 211 EYKFYYASDVWSF 223
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 90/191 (47%), Gaps = 18/191 (9%)
Query: 497 KLGQGGFGSVYLGML-PDGIQVAVKKL-ESIGQG-KKEFSAEVTTIGNVHHLHLVKLKGF 553
++G+G FG V+ G L D VAVK E++ K +F E + H ++V+L G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKI 613
C + + E + G D F TE +R L T + A G+ YL +C
Sbjct: 181 CTQKQPIYIVMELVQGG--DFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 614 VHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESL-VYTTLRGTR----GYLAPEWITNN 668
+H D+ N L+ + K+SDFG M+REE+ VY G R + APE +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFG----MSREEADGVYAASGGLRQVPVKWTAPEALNYG 290
Query: 669 PISEKSDVYSY 679
S +SDV+S+
Sbjct: 291 RYSSESDVWSF 301
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 74
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 127
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S T L GT YL PE I
Sbjct: 128 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTELCGTLDYLPPEMIEGRM 182
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 183 HDEKVDLWS 191
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 76
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 77 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 129
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K+++FG + S TTL GT YL PE I
Sbjct: 130 --RVIHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 184
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 185 HDEKVDLWS 193
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 74
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 127
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S T L GT YL PE I
Sbjct: 128 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 183 HDEKVDLWS 191
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 75
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 128
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S TL GT YL PE I
Sbjct: 129 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDTLCGTLDYLPPEMIEGRM 183
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 184 HDEKVDLWS 192
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 75
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 128
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S T L GT YL PE I
Sbjct: 129 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRM 183
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 184 HDEKVDLWS 192
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 74
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 127
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S T L GT YL PE I
Sbjct: 128 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 183 HDEKVDLWS 191
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 60/110 (54%), Gaps = 17/110 (15%)
Query: 571 SLDKWIFNSTEE----SRFL-----SWNTRFNIALGMAKGLAYLHEEC-------EVKIV 614
+D W+ + E S FL SWN +IA MA+GLAYLHE+ + I
Sbjct: 94 DVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAIS 153
Query: 615 HCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLR-GTRGYLAPE 663
H DIK +NVLL +N TA ++DFGLA +S T + GTR Y+APE
Sbjct: 154 HRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 19/194 (9%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNV-HHLHLVKLKGFCI 555
+G G +G VY G + G A+K ++ G ++E E+ + HH ++ G I
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 556 E------GAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
+ L E+ G GS+ I N+ + W I + +GL++LH+
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIA--YICREILRGLSHLHQH- 148
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWIT--N 667
K++H DIK +NVLL +N K+ DFG++ ++R T GT ++APE I
Sbjct: 149 --KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR-RNTFIGTPYWMAPEVIACDE 205
Query: 668 NPISE---KSDVYS 678
NP + KSD++S
Sbjct: 206 NPDATYDFKSDLWS 219
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 14/186 (7%)
Query: 497 KLGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGF 553
K+G+G FG V+ G+ + + + LE ++ E+T + ++ K G
Sbjct: 29 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 88
Query: 554 CIEGAHRLLAYEYLGNGS-LDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
++ + EYLG GS LD +E++ + I + KGL YLH E K
Sbjct: 89 YLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIAT------ILREILKGLDYLHSE---K 139
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISE 672
+H DIK NVLL ++ K++DFG+A + + + GT ++APE I +
Sbjct: 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNXFVGTPFWMAPEVIKQSAYDS 198
Query: 673 KSDVYS 678
K+D++S
Sbjct: 199 KADIWS 204
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 79
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 132
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S T L GT YL PE I
Sbjct: 133 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRM 187
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 188 HDEKVDLWS 196
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 77
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 130
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K+++FG + S TTL GT YL PE I
Sbjct: 131 --RVIHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 186 HDEKVDLWS 194
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 14/186 (7%)
Query: 497 KLGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGF 553
K+G+G FG V+ G+ + + + LE ++ E+T + ++ K G
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 73
Query: 554 CIEGAHRLLAYEYLGNGS-LDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
++ + EYLG GS LD +E++ + I + KGL YLH E K
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIAT------ILREILKGLDYLHSE---K 124
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISE 672
+H DIK NVLL ++ K++DFG+A + + + GT ++APE I +
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNXFVGTPFWMAPEVIKQSAYDS 183
Query: 673 KSDVYS 678
K+D++S
Sbjct: 184 KADIWS 189
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 83/180 (46%), Gaps = 22/180 (12%)
Query: 498 LGQGGFGSVYLGMLP-DGIQVAVK--------KLESIGQGKKEFSAEVTTIGNVHHLHLV 548
LG G FG V +G G +VAVK L+ +G+ K+E + + H H++
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKRE----IQNLKLFRHPHII 74
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
KL + EY+ G L +I + R R + + + Y H
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGELFDYI---CKHGRVEEMEAR-RLFQQILSAVDYCHRH 130
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNN 668
+VH D+KPENVLLD + AK++DFGL+ +M+ E L T G+ Y APE I+
Sbjct: 131 M---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL--RTSCGSPNYAAPEVISGR 185
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 32/216 (14%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQ------VAVKKLESIGQGKK--EFSAEVT 537
++ + S +LGQG FG VY G+ ++ VA+K + ++ EF E +
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 538 TIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFN---STEESRFL---SWNTR 591
+ + H+V+L G +G L+ E + G L ++ + E + L S +
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 592 FNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT 651
+A +A G+AYL+ K VH D+ N + ++FT K+ DFG M R+ +Y
Sbjct: 128 IQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFG----MTRD---IYE 177
Query: 652 T---LRGTRGYLAPEWITNNPISEK-----SDVYSY 679
T +G +G L W++ + + SDV+S+
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 213
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 74
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 127
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S T L GT YL PE I
Sbjct: 128 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTXLCGTLDYLPPEMIEGRM 182
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 183 HDEKVDLWS 191
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQ------VAVKKLESIGQGKK--EFSAEVT 537
++ + S +LGQG FG VY G+ ++ VA+K + ++ EF E +
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 70
Query: 538 TIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFN---STEESRFL---SWNTR 591
+ + H+V+L G +G L+ E + G L ++ + + + L S +
Sbjct: 71 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 130
Query: 592 FNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT 651
+A +A G+AYL+ K VH D+ N ++ ++FT K+ DFG M R+ +Y
Sbjct: 131 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRD---IYE 180
Query: 652 T---LRGTRGYLAPEWITNNPISEK-----SDVYSY 679
T +G +G L W++ + + SDV+S+
Sbjct: 181 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 216
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 12/185 (6%)
Query: 497 KLGQGGFGSVYLGM---LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGF 553
++G+G FG VY G+ + + + + LE ++ E+T + ++ + G
Sbjct: 26 RIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGS 85
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKI 613
++ + EYLG GS + E +++ I + KGL YLH E +
Sbjct: 86 YLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIA-----TILREILKGLDYLHSE---RK 137
Query: 614 VHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEK 673
+H DIK NVLL + K++DFG+A + + + GT ++APE I + K
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLT-DTQIKRNXFVGTPFWMAPEVIKQSAYDFK 196
Query: 674 SDVYS 678
+D++S
Sbjct: 197 ADIWS 201
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 32/216 (14%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQ------VAVKKLESIGQGKK--EFSAEVT 537
++ + S +LGQG FG VY G+ ++ VA+K + ++ EF E +
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 538 TIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFN---STEESRFL---SWNTR 591
+ + H+V+L G +G L+ E + G L ++ + + + L S +
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 140
Query: 592 FNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT 651
+A +A G+AYL+ K VH D+ N ++ ++FT K+ DFG M R+ +Y
Sbjct: 141 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRD---IYE 190
Query: 652 T---LRGTRGYLAPEWITNNPISEK-----SDVYSY 679
T +G +G L W++ + + SDV+S+
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSF 226
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 88/194 (45%), Gaps = 30/194 (15%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V+L +L I V +K++E E + V H
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTND-------ERLMLSIVTHP 66
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
++++ G + + +Y+ G L + S RF + +F A + L YL
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS---QRFPNPVAKF-YAAEVCLALEYL 122
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
H + I++ D+KPEN+LLD N K++DFG AK + V L GT Y+APE +
Sbjct: 123 HSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGTPDYIAPEVV 175
Query: 666 TNNPISEKSDVYSY 679
+ P ++ D +S+
Sbjct: 176 STKPYNKSIDWWSF 189
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL + ++V K +LE G + + EV ++ H ++++L
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 74
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 75 GYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 127
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
K++H DIKPEN+LL K++DFG + S L GT YL PE I
Sbjct: 128 --KVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 183 HDEKVDLWS 191
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 32/211 (15%)
Query: 498 LGQGGFGSV------YLGMLPDGIQVAVKKLESIGQGK--KEFSAEVTTIGNVHHLHLVK 549
LG+G FG V +L VAVK L+ ++ +E + V+H H++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTE--------------------ESRFLSWN 589
L G C + LL EY GSL ++ S + + R L+
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 590 TRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLV 649
+ A +++G+ YL E+ +VH D+ N+L+ + K+SDFGL++ + E+S V
Sbjct: 151 DLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 650 YTTL-RGTRGYLAPEWITNNPISEKSDVYSY 679
+ R ++A E + ++ + +SDV+S+
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 22/180 (12%)
Query: 498 LGQGGFGSVYLGMLP-DGIQVAVK--------KLESIGQGKKEFSAEVTTIGNVHHLHLV 548
LG G FG V +G G +VAVK L+ +G+ K+E + + H H++
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKRE----IQNLKLFRHPHII 74
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
KL + EY+ G L +I + R R + + + Y H
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGELFDYI---CKHGRVEEMEAR-RLFQQILSAVDYCHRH 130
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNN 668
+VH D+KPENVLLD + AK++DFGL+ +M+ E L + G+ Y APE I+
Sbjct: 131 M---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC--GSPNYAAPEVISGR 185
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 97/217 (44%), Gaps = 28/217 (12%)
Query: 472 LEKISGMP---TR-FSYDDLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQ 527
+E SG P TR F+ DD LG+G FG+VYL + K+ Q
Sbjct: 6 MENSSGTPDILTRHFTIDDF-----EIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQ 60
Query: 528 GKKE-----FSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNST-- 580
+KE E+ ++HH ++++L + + L EY G L K + S
Sbjct: 61 IEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTF 120
Query: 581 EESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAK 640
+E R + I +A L Y H + K++H DIKPEN+LL K++DFG +
Sbjct: 121 DEQRTAT------IMEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSV 171
Query: 641 LMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVY 677
SL T+ GT YL PE I +EK D++
Sbjct: 172 ---HAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLW 205
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 31/214 (14%)
Query: 475 ISGMPTR-FSYDDLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKE-- 531
++ MP R F+ DD + LG+G FG+VYL + K+ Q +KE
Sbjct: 4 LAEMPKRKFTIDDF-----DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV 58
Query: 532 ---FSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWI-----FNSTEES 583
E+ ++ H +++++ + + L E+ G L K + F+ +
Sbjct: 59 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 118
Query: 584 RFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMN 643
F+ +A L Y HE K++H DIKPEN+L+ K++DFG +
Sbjct: 119 TFME---------ELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS---V 163
Query: 644 REESLVYTTLRGTRGYLAPEWITNNPISEKSDVY 677
SL + GT YL PE I EK D++
Sbjct: 164 HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLW 197
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 32/205 (15%)
Query: 497 KLGQGGFGSVYLGMLPDGIQ------VAVKKLESIG--QGKKEFSAEVTTIGNVHHLHLV 548
+LGQG FG VY G D I+ VAVK + + + EF E + + H+V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESR------FLSWNTRFNIALGMAKGL 602
+L G +G L+ E + +G L ++ + E+ + +A +A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT---LRGTRG- 658
AYL+ + K VH ++ N ++ +FT K+ DFG M R+ +Y T +G +G
Sbjct: 144 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFG----MTRD---IYETDYYRKGGKGL 193
Query: 659 ----YLAPEWITNNPISEKSDVYSY 679
++APE + + + SD++S+
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSF 218
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 77
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 130
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S L GT YL PE I
Sbjct: 131 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRM 185
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 186 HDEKVDLWS 194
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 31/214 (14%)
Query: 475 ISGMPTR-FSYDDLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKE-- 531
++ MP R F+ DD + LG+G FG+VYL + K+ Q +KE
Sbjct: 3 LAEMPKRKFTIDDF-----DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV 57
Query: 532 ---FSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWI-----FNSTEES 583
E+ ++ H +++++ + + L E+ G L K + F+ +
Sbjct: 58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 117
Query: 584 RFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMN 643
F+ +A L Y HE K++H DIKPEN+L+ K++DFG +
Sbjct: 118 TFME---------ELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS---V 162
Query: 644 REESLVYTTLRGTRGYLAPEWITNNPISEKSDVY 677
SL + GT YL PE I EK D++
Sbjct: 163 HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLW 196
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 97/205 (47%), Gaps = 32/205 (15%)
Query: 497 KLGQGGFGSVYLGMLPDGIQ------VAVKKLESIG--QGKKEFSAEVTTIGNVHHLHLV 548
+LGQG FG VY G D I+ VAVK + + + EF E + + H+V
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESR------FLSWNTRFNIALGMAKGL 602
+L G +G L+ E + +G L ++ + E+ + +A +A G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT---LRGTRG- 658
AYL+ + K VH ++ N ++ +FT K+ DFG M R+ +Y T +G +G
Sbjct: 145 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFG----MTRD---IYETDYYRKGGKGL 194
Query: 659 ----YLAPEWITNNPISEKSDVYSY 679
++APE + + + SD++S+
Sbjct: 195 LPVRWMAPESLKDGVFTTSSDMWSF 219
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 31/214 (14%)
Query: 475 ISGMPTR-FSYDDLCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKE-- 531
++ MP R F+ DD + LG+G FG+VYL + K+ Q +KE
Sbjct: 3 LAEMPKRKFTIDDF-----DIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV 57
Query: 532 ---FSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWI-----FNSTEES 583
E+ ++ H +++++ + + L E+ G L K + F+ +
Sbjct: 58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA 117
Query: 584 RFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMN 643
F+ +A L Y HE K++H DIKPEN+L+ K++DFG +
Sbjct: 118 TFME---------ELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS---V 162
Query: 644 REESLVYTTLRGTRGYLAPEWITNNPISEKSDVY 677
SL + GT YL PE I EK D++
Sbjct: 163 HAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLW 196
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 10/188 (5%)
Query: 481 RFSYDDLCKATK---NFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVT 537
+ D L K + + KLG+G +GSVY + + Q+ K + +E E++
Sbjct: 17 KLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEIS 76
Query: 538 TIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALG 597
+ H+VK G + + EY G GS+ I ++ L+ + I
Sbjct: 77 IMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDII---RLRNKTLTEDEIATILQS 133
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
KGL YLH ++ +H DIK N+LL+ AK++DFG+A + + + GT
Sbjct: 134 TLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLT-DXMAKRNXVIGTP 189
Query: 658 GYLAPEWI 665
++APE I
Sbjct: 190 FWMAPEVI 197
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 17/161 (10%)
Query: 498 LGQGGFGSVYLGML------PDGIQVAVKKLESI--GQGKKEFSAEVTTIGNVHHLHLVK 549
LG G FG VY G + P +QVAVK L + Q + +F E I ++H ++V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNS---TEESRFLSWNTRFNIALGMAKGLAYLH 606
G ++ R + E + G L ++ + + L+ ++A +A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 607 EECEVKIVHCDIKPENVLLD---DNFTAKVSDFGLAKLMNR 644
E +H DI N LL AK+ DFG+A+ + R
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 196
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 92/191 (48%), Gaps = 25/191 (13%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAG-VEHQLRREVEIQSHLRHPNILRLY 100
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 101 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 153
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFG--LAKLMNREESLVYTTLRGTRGYLAPEWITN 667
+++H DIKPEN+LL K++DFG + +R + L GT YL PE I
Sbjct: 154 --RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC-----GTLDYLPPEMIEG 206
Query: 668 NPISEKSDVYS 678
EK D++S
Sbjct: 207 RMHDEKVDLWS 217
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 74
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 127
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S L GT YL PE I
Sbjct: 128 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 183 HDEKVDLWS 191
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 17/161 (10%)
Query: 498 LGQGGFGSVYLGML------PDGIQVAVKKLESI--GQGKKEFSAEVTTIGNVHHLHLVK 549
LG G FG VY G + P +QVAVK L + Q + +F E I ++H ++V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNS---TEESRFLSWNTRFNIALGMAKGLAYLH 606
G ++ R + E + G L ++ + + L+ ++A +A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 607 EECEVKIVHCDIKPENVLLD---DNFTAKVSDFGLAKLMNR 644
E +H DI N LL AK+ DFG+A+ + R
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 210
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 494 FSTKLGQGGFGSVYL-GMLPDGIQVAVKKLE-SIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
F LG G F V+L G A+K ++ S E+ + + H ++V L+
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
H L + + G L F+ E + + + + YLHE
Sbjct: 73 DIYESTTHYYLVMQLVSGGEL----FDRILERGVYTEKDASLVIQQVLSAVKYLHEN--- 125
Query: 612 KIVHCDIKPENVLL---DDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNN 668
IVH D+KPEN+L ++N ++DFGL+K+ E++ + +T GT GY+APE +
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEVLAQK 182
Query: 669 PISEKSDVYS 678
P S+ D +S
Sbjct: 183 PYSKAVDCWS 192
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 76
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 77 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 129
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S L GT YL PE I
Sbjct: 130 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRM 184
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 185 HDEKVDLWS 193
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 92/191 (48%), Gaps = 25/191 (13%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 77
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 130
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFG--LAKLMNREESLVYTTLRGTRGYLAPEWITN 667
+++H DIKPEN+LL K++DFG + +R + L GT YL PE I
Sbjct: 131 --RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC-----GTLDYLPPEMIEG 183
Query: 668 NPISEKSDVYS 678
EK D++S
Sbjct: 184 RMHDEKVDLWS 194
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 11/150 (7%)
Query: 516 QVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKW 575
+++ ++LE + + + + + + H H++ L + L ++ + G L
Sbjct: 133 RLSPEQLEEVREATRRETHILRQVAG--HPHIITLIDSYESSSFMFLVFDLMRKGEL--- 187
Query: 576 IFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSD 635
F+ E LS +I + + +++LH IVH D+KPEN+LLDDN ++SD
Sbjct: 188 -FDYLTEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSD 243
Query: 636 FGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
FG + + E L L GT GYLAPE +
Sbjct: 244 FGFSCHLEPGEKL--RELCGTPGYLAPEIL 271
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 111/252 (44%), Gaps = 30/252 (11%)
Query: 455 RKRLTKFSQEDLEEDNFLEKISGMPTRFSYDDLCKATKN---FSTKLGQGGFGSVY---- 507
+K + + + +EE N + PT+ YD + +N F LG G FG V
Sbjct: 1 QKPMYEVQWKVVEEINGNNXVXIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATA 60
Query: 508 LGMLPD--GIQVAVKKLESIGQ--GKKEFSAEVTTIGNV-HHLHLVKLKGFCIEGAHRLL 562
G++ + VAVK L+ ++ +E+ + + +H+++V L G C G L+
Sbjct: 61 YGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLV 120
Query: 563 AYEYLGNGSL--------DKWIFNSTEESRFLSWNTRF------NIALGMAKGLAYLHEE 608
EY G L D +I + T + + + +AKG+A+L +
Sbjct: 121 ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK 180
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAK-LMNREESLVYTTLRGTRGYLAPEWITN 667
+H D+ N+LL K+ DFGLA+ + N +V R ++APE I N
Sbjct: 181 ---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN 237
Query: 668 NPISEKSDVYSY 679
+ +SDV+SY
Sbjct: 238 CVYTFESDVWSY 249
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 20/194 (10%)
Query: 493 NFSTKLGQGGFGSVY-LGMLPDGIQVAVKKLESIGQGKKE-FSAEVTTIGNVHHLHLVKL 550
+ +LG G FG V+ + G A K + + + KE E+ T+ + H LV L
Sbjct: 54 DIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL 113
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
+ ++ YE++ G L + + +E +S + + KGL ++HE
Sbjct: 114 HDAFEDDNEMVMIYEFMSGGELFEKV---ADEHNKMSEDEAVEYMRQVCKGLCHMHEN-- 168
Query: 611 VKIVHCDIKPENVLLDDNFTAKVS------DFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
VH D+KPEN++ FT K S DFGL ++ ++S+ TT GT + APE
Sbjct: 169 -NYVHLDLKPENIM----FTTKRSNELKLIDFGLTAHLDPKQSVKVTT--GTAEFAAPEV 221
Query: 665 ITNNPISEKSDVYS 678
P+ +D++S
Sbjct: 222 AEGKPVGYYTDMWS 235
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 94/189 (49%), Gaps = 20/189 (10%)
Query: 498 LGQGGFGSVY-LGMLPDGIQVAVKKLESIG-QGKKEFSAEVTTIGNVHHLHLVKLKGFCI 555
LG G FG V+ G+++A K +++ G + K+E E++ + + H +L++L
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE 156
Query: 556 EGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWN-TRFNIALGMAK---GLAYLHEECEV 611
+L EY+ G L I + S+N T + L M + G+ ++H+ +
Sbjct: 157 SKNDIVLVMEYVDGGELFDRIIDE-------SYNLTELDTILFMKQICEGIRHMHQ---M 206
Query: 612 KIVHCDIKPENVLL--DDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
I+H D+KPEN+L D K+ DFGLA+ E L GT +LAPE + +
Sbjct: 207 YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF--GTPEFLAPEVVNYDF 264
Query: 670 ISEKSDVYS 678
+S +D++S
Sbjct: 265 VSFPTDMWS 273
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 20/194 (10%)
Query: 493 NFSTKLGQGGFGSVY-LGMLPDGIQVAVKKLESIGQGKKE-FSAEVTTIGNVHHLHLVKL 550
+ +LG G FG V+ + G A K + + + KE E+ T+ + H LV L
Sbjct: 160 DIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL 219
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
+ ++ YE++ G L + + +E +S + + KGL ++HE
Sbjct: 220 HDAFEDDNEMVMIYEFMSGGELFEKV---ADEHNKMSEDEAVEYMRQVCKGLCHMHEN-- 274
Query: 611 VKIVHCDIKPENVLLDDNFTAKVS------DFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
VH D+KPEN++ FT K S DFGL ++ ++S+ TT GT + APE
Sbjct: 275 -NYVHLDLKPENIM----FTTKRSNELKLIDFGLTAHLDPKQSVKVTT--GTAEFAAPEV 327
Query: 665 ITNNPISEKSDVYS 678
P+ +D++S
Sbjct: 328 AEGKPVGYYTDMWS 341
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 17/161 (10%)
Query: 498 LGQGGFGSVYLGML------PDGIQVAVKKLESI--GQGKKEFSAEVTTIGNVHHLHLVK 549
LG G FG VY G + P +QVAVK L + Q + +F E I +H ++V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNS---TEESRFLSWNTRFNIALGMAKGLAYLH 606
G ++ R + E + G L ++ + + L+ ++A +A G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 607 EECEVKIVHCDIKPENVLLD---DNFTAKVSDFGLAKLMNR 644
E +H DI N LL AK+ DFG+A+ + R
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 210
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 17/161 (10%)
Query: 498 LGQGGFGSVYLGML------PDGIQVAVKKLESI--GQGKKEFSAEVTTIGNVHHLHLVK 549
LG G FG VY G + P +QVAVK L + Q + +F E I +H ++V+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNS---TEESRFLSWNTRFNIALGMAKGLAYLH 606
G ++ R + E + G L ++ + + L+ ++A +A G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 607 EECEVKIVHCDIKPENVLLD---DNFTAKVSDFGLAKLMNR 644
E +H DI N LL AK+ DFG+A+ + R
Sbjct: 199 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 236
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 74
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 127
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S L GT YL PE I
Sbjct: 128 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRM 182
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 183 HDEKVDLWS 191
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 17/161 (10%)
Query: 498 LGQGGFGSVYLGML------PDGIQVAVKKLESI--GQGKKEFSAEVTTIGNVHHLHLVK 549
LG G FG VY G + P +QVAVK L + Q + +F E I +H ++V+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNS---TEESRFLSWNTRFNIALGMAKGLAYLH 606
G ++ R + E + G L ++ + + L+ ++A +A G YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 607 EECEVKIVHCDIKPENVLLD---DNFTAKVSDFGLAKLMNR 644
E +H DI N LL AK+ DFG+A+ + R
Sbjct: 165 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 202
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 21/189 (11%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVK-KLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
LG+G FG+VYL ++V K +LE G + + EV ++ H ++++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 77
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
G+ + L EY G++ + + + +E R ++ T +A L+Y H +
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE------LANALSYCHSK- 130
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+++H DIKPEN+LL K++DFG + S L GT YL PE I
Sbjct: 131 --RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRM 185
Query: 670 ISEKSDVYS 678
EK D++S
Sbjct: 186 HDEKVDLWS 194
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 17/161 (10%)
Query: 498 LGQGGFGSVYLGML------PDGIQVAVKKLESI--GQGKKEFSAEVTTIGNVHHLHLVK 549
LG G FG VY G + P +QVAVK L + Q + +F E I +H ++V+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNS---TEESRFLSWNTRFNIALGMAKGLAYLH 606
G ++ R + E + G L ++ + + L+ ++A +A G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 607 EECEVKIVHCDIKPENVLLD---DNFTAKVSDFGLAKLMNR 644
E +H DI N LL AK+ DFG+A+ + R
Sbjct: 175 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 212
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 17/161 (10%)
Query: 498 LGQGGFGSVYLGML------PDGIQVAVKKLESI--GQGKKEFSAEVTTIGNVHHLHLVK 549
LG G FG VY G + P +QVAVK L + Q + +F E I +H ++V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNS---TEESRFLSWNTRFNIALGMAKGLAYLH 606
G ++ R + E + G L ++ + + L+ ++A +A G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 607 EECEVKIVHCDIKPENVLLD---DNFTAKVSDFGLAKLMNR 644
E +H DI N LL AK+ DFG+A+ + R
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 195
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 19/193 (9%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVKKLESI--GQGKKEFSAEVTTIGNVHHLHLVKL 550
LG+G FG V L G VAVK L++ Q + + E+ + ++H H++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 551 KGFCIEGAHR--LLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
KG C + + L EY+ GSL ++ + + A + +G+AYLH +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-----IGLAQLLLFAQQICEGMAYLHSQ 136
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRG--YLAPEWIT 666
+H ++ NVLLD++ K+ DFGLAK + G + APE +
Sbjct: 137 ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 667 NNPISEKSDVYSY 679
SDV+S+
Sbjct: 194 EYKFYYASDVWSF 206
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 17/161 (10%)
Query: 498 LGQGGFGSVYLGML------PDGIQVAVKKLESI--GQGKKEFSAEVTTIGNVHHLHLVK 549
LG G FG VY G + P +QVAVK L + Q + +F E I +H ++V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNS---TEESRFLSWNTRFNIALGMAKGLAYLH 606
G ++ R + E + G L ++ + + L+ ++A +A G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 607 EECEVKIVHCDIKPENVLLD---DNFTAKVSDFGLAKLMNR 644
E +H DI N LL AK+ DFG+A+ + R
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 195
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 17/161 (10%)
Query: 498 LGQGGFGSVYLGML------PDGIQVAVKKLESI--GQGKKEFSAEVTTIGNVHHLHLVK 549
LG G FG VY G + P +QVAVK L + Q + +F E I +H ++V+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNS---TEESRFLSWNTRFNIALGMAKGLAYLH 606
G ++ R + E + G L ++ + + L+ ++A +A G YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 607 EECEVKIVHCDIKPENVLLD---DNFTAKVSDFGLAKLMNR 644
E +H DI N LL AK+ DFG+A+ + R
Sbjct: 185 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 222
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 28/200 (14%)
Query: 497 KLGQGGFGSVYL-----GMLPDGIQVAVKKL----------ESIGQGKKEFSAEVTTIGN 541
KLG G +G V L G I+V K ++I + +E E++ + +
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 542 VHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKG 601
+ H +++KL + + L E+ G L + I N +F + NI + G
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR---HKFDECDAA-NIMKQILSG 158
Query: 602 LAYLHEECEVKIVHCDIKPENVLLDDN---FTAKVSDFGLAKLMNREESLVYTTLRGTRG 658
+ YLH+ IVH DIKPEN+LL++ K+ DFGL+ +++ L GT
Sbjct: 159 ICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL--RDRLGTAY 213
Query: 659 YLAPEWITNNPISEKSDVYS 678
Y+APE + +EK DV+S
Sbjct: 214 YIAPE-VLKKKYNEKCDVWS 232
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 89/191 (46%), Gaps = 18/191 (9%)
Query: 497 KLGQGGFGSVYLGML-PDGIQVAVKKL-ESIGQG-KKEFSAEVTTIGNVHHLHLVKLKGF 553
++G+G FG V+ G L D VAVK E++ K +F E + H ++V+L G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKI 613
C + + E + G D F TE +R L T + A G+ YL +C
Sbjct: 181 CTQKQPIYIVMELVQGG--DFLTFLRTEGAR-LRVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 614 VHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESL-VYTTLRGTR----GYLAPEWITNN 668
+H D+ N L+ + K+SDFG M+REE+ V G R + APE +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFG----MSREEADGVXAASGGLRQVPVKWTAPEALNYG 290
Query: 669 PISEKSDVYSY 679
S +SDV+S+
Sbjct: 291 RYSSESDVWSF 301
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 19/193 (9%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVKKLESI--GQGKKEFSAEVTTIGNVHHLHLVKL 550
LG+G FG V L G VAVK L++ Q + + E+ + ++H H++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 551 KGFCIEGAHR--LLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
KG C + + L EY+ GSL ++ + + A + +G+AYLH +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-----IGLAQLLLFAQQICEGMAYLHAQ 136
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRG--YLAPEWIT 666
+H ++ NVLLD++ K+ DFGLAK + G + APE +
Sbjct: 137 ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 667 NNPISEKSDVYSY 679
SDV+S+
Sbjct: 194 EYKFYYASDVWSF 206
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 17/161 (10%)
Query: 498 LGQGGFGSVYLGML------PDGIQVAVKKLESI--GQGKKEFSAEVTTIGNVHHLHLVK 549
LG G FG VY G + P +QVAVK L + Q + +F E I +H ++V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNS---TEESRFLSWNTRFNIALGMAKGLAYLH 606
G ++ R + E + G L ++ + + L+ ++A +A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 607 EECEVKIVHCDIKPENVLLD---DNFTAKVSDFGLAKLMNR 644
E +H DI N LL AK+ DFG+A+ + R
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 196
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 17/161 (10%)
Query: 498 LGQGGFGSVYLGML------PDGIQVAVKKLESI--GQGKKEFSAEVTTIGNVHHLHLVK 549
LG G FG VY G + P +QVAVK L + Q + +F E I +H ++V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNS---TEESRFLSWNTRFNIALGMAKGLAYLH 606
G ++ R + E + G L ++ + + L+ ++A +A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 607 EECEVKIVHCDIKPENVLLD---DNFTAKVSDFGLAKLMNR 644
E +H DI N LL AK+ DFG+A+ + R
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 210
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 17/161 (10%)
Query: 498 LGQGGFGSVYLGML------PDGIQVAVKKLESI--GQGKKEFSAEVTTIGNVHHLHLVK 549
LG G FG VY G + P +QVAVK L + Q + +F E I +H ++V+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNS---TEESRFLSWNTRFNIALGMAKGLAYLH 606
G ++ R + E + G L ++ + + L+ ++A +A G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 607 EECEVKIVHCDIKPENVLLD---DNFTAKVSDFGLAKLMNR 644
E +H DI N LL AK+ DFG+A+ + R
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 187
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 17/161 (10%)
Query: 498 LGQGGFGSVYLGML------PDGIQVAVKKLESI--GQGKKEFSAEVTTIGNVHHLHLVK 549
LG G FG VY G + P +QVAVK L + Q + +F E I +H ++V+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNS---TEESRFLSWNTRFNIALGMAKGLAYLH 606
G ++ R + E + G L ++ + + L+ ++A +A G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 607 EECEVKIVHCDIKPENVLLD---DNFTAKVSDFGLAKLMNR 644
E +H DI N LL AK+ DFG+A+ + R
Sbjct: 176 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYR 213
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 30/228 (13%)
Query: 479 PTRFSYDDLCKATKN---FSTKLGQGGFGSVY----LGMLPD--GIQVAVKKLESIGQ-- 527
PT+ YD + +N F LG G FG V G++ + VAVK L+
Sbjct: 9 PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 68
Query: 528 GKKEFSAEVTTIGNV-HHLHLVKLKGFCIEGAHRLLAYEYLGNGSL--------DKWIFN 578
++ +E+ + + +H+++V L G C G L+ EY G L D +I +
Sbjct: 69 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 128
Query: 579 STEESRFLSWNTRF------NIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAK 632
T + + + +AKG+A+L + +H D+ N+LL K
Sbjct: 129 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITK 185
Query: 633 VSDFGLAK-LMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYSY 679
+ DFGLA+ + N +V R ++APE I N + +SDV+SY
Sbjct: 186 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSY 233
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 30/228 (13%)
Query: 479 PTRFSYDDLCKATKN---FSTKLGQGGFGSVY----LGMLPD--GIQVAVKKLESIGQ-- 527
PT+ YD + +N F LG G FG V G++ + VAVK L+
Sbjct: 27 PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 86
Query: 528 GKKEFSAEVTTIGNV-HHLHLVKLKGFCIEGAHRLLAYEYLGNGSL--------DKWIFN 578
++ +E+ + + +H+++V L G C G L+ EY G L D +I +
Sbjct: 87 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 146
Query: 579 STEESRFLSWNTRF------NIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAK 632
T + + + +AKG+A+L + +H D+ N+LL K
Sbjct: 147 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITK 203
Query: 633 VSDFGLAK-LMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYSY 679
+ DFGLA+ + N +V R ++APE I N + +SDV+SY
Sbjct: 204 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSY 251
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 102/201 (50%), Gaps = 26/201 (12%)
Query: 498 LGQGGFGSVYLGMLP--DG--IQVAVK--KLESIGQGK-KEFSAEVTTIGNVHHLHLVKL 550
LG+G FGSV G L DG ++VAVK KL++ Q + +EF +E + + H ++++L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 551 KGFCIEGAHR-----LLAYEYLGNGSLDKWIFNSTEES--RFLSWNTRFNIALGMAKGLA 603
G CIE + + ++ ++ G L ++ S E+ + + T + +A G+
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 604 YLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM-----NREESLVYTTLRGTRG 658
YL +H D+ N +L D+ T V+DFGL+K + R+ + ++
Sbjct: 162 YLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK---- 214
Query: 659 YLAPEWITNNPISEKSDVYSY 679
++A E + + + KSDV+++
Sbjct: 215 WIAIESLADRVYTSKSDVWAF 235
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 17/161 (10%)
Query: 498 LGQGGFGSVYLGML------PDGIQVAVKKLESI--GQGKKEFSAEVTTIGNVHHLHLVK 549
LG G FG VY G + P +QVAVK L + Q + +F E I +H ++V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNS---TEESRFLSWNTRFNIALGMAKGLAYLH 606
G ++ R + E + G L ++ + + L+ ++A +A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 607 EECEVKIVHCDIKPENVLLD---DNFTAKVSDFGLAKLMNR 644
E +H DI N LL AK+ DFG+A+ + R
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYR 196
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 498 LGQGGFGSVYLGMLPDGIQV-------AVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
LGQG FG V+L G +KK + + E + V+H +VKL
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 551 K-GFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
F EG L+ ++L G L ++E F + +F +A +A L +LH
Sbjct: 92 HYAFQTEGKLYLI-LDFLRGGDL---FTRLSKEVMFTEEDVKFYLA-ELALALDHLHS-- 144
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+ I++ D+KPEN+LLD+ K++DFGL+K E Y + GT Y+APE +
Sbjct: 145 -LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY-SFCGTVEYMAPEVVNRRG 202
Query: 670 ISEKSDVYSY 679
++ +D +S+
Sbjct: 203 HTQSADWWSF 212
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 30/228 (13%)
Query: 479 PTRFSYDDLCKATKN---FSTKLGQGGFGSVY----LGMLPD--GIQVAVKKLESIGQ-- 527
PT+ YD + +N F LG G FG V G++ + VAVK L+
Sbjct: 32 PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 91
Query: 528 GKKEFSAEVTTIGNV-HHLHLVKLKGFCIEGAHRLLAYEYLGNGSL--------DKWIFN 578
++ +E+ + + +H+++V L G C G L+ EY G L D +I +
Sbjct: 92 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 151
Query: 579 STEESRFLSWNTRF------NIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAK 632
T + + + +AKG+A+L + +H D+ N+LL K
Sbjct: 152 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITK 208
Query: 633 VSDFGLAK-LMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYSY 679
+ DFGLA+ + N +V R ++APE I N + +SDV+SY
Sbjct: 209 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSY 256
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 111/236 (47%), Gaps = 40/236 (16%)
Query: 452 HNKRKRLTKFSQE-----DLEEDNFLEKISGMPTRFSYDDLCKATKNFSTKLGQGGFGSV 506
+RKRL F + +L++D+F EKIS +LG G G V
Sbjct: 46 EQQRKRLEAFLTQKQKVGELKDDDF-EKIS--------------------ELGAGNGGVV 84
Query: 507 Y-LGMLPDGIQVAVK--KLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLA 563
+ + P G+ +A K LE + + E+ + + ++V G +
Sbjct: 85 FKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 144
Query: 564 YEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENV 623
E++ GSLD+ + +++ + +++ + KGL YL E+ KI+H D+KP N+
Sbjct: 145 MEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNI 198
Query: 624 LLDDNFTAKVSDFGLA-KLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
L++ K+ DFG++ +L++ + + GTR Y++PE + S +SD++S
Sbjct: 199 LVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWS 250
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 30/228 (13%)
Query: 479 PTRFSYDDLCKATKN---FSTKLGQGGFGSVY----LGMLPD--GIQVAVKKLESIGQ-- 527
PT+ YD + +N F LG G FG V G++ + VAVK L+
Sbjct: 32 PTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLT 91
Query: 528 GKKEFSAEVTTIGNV-HHLHLVKLKGFCIEGAHRLLAYEYLGNGSL--------DKWIFN 578
++ +E+ + + +H+++V L G C G L+ EY G L D +I +
Sbjct: 92 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 151
Query: 579 STEESRFLSWNTRF------NIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAK 632
T + + + +AKG+A+L + +H D+ N+LL K
Sbjct: 152 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITK 208
Query: 633 VSDFGLAK-LMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYSY 679
+ DFGLA+ + N +V R ++APE I N + +SDV+SY
Sbjct: 209 ICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSY 256
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 97/192 (50%), Gaps = 20/192 (10%)
Query: 493 NFSTKLGQGGFGSVYLGML-PDGIQVAVKKLESIGQGKKEFS-AEVTTIGNVHHLHLVKL 550
NF K+G+G G V + + G VAVKK++ Q ++E EV + + H ++V++
Sbjct: 33 NF-IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM 91
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
+ G + E+L G+L + ++ ++ + L + + L+ LH +
Sbjct: 92 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG- 145
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFG----LAKLMNREESLVYTTLRGTRGYLAPEWIT 666
++H DIK +++LL + K+SDFG ++K + R + LV GT ++APE I+
Sbjct: 146 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-----GTPYWMAPELIS 198
Query: 667 NNPISEKSDVYS 678
P + D++S
Sbjct: 199 RLPYGPEVDIWS 210
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 97/192 (50%), Gaps = 20/192 (10%)
Query: 493 NFSTKLGQGGFGSVYLGML-PDGIQVAVKKLESIGQGKKEFS-AEVTTIGNVHHLHLVKL 550
NF K+G+G G V + + G VAVKK++ Q ++E EV + + H ++V++
Sbjct: 24 NF-IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM 82
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
+ G + E+L G+L + ++ ++ + L + + L+ LH +
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG- 136
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFG----LAKLMNREESLVYTTLRGTRGYLAPEWIT 666
++H DIK +++LL + K+SDFG ++K + R + LV GT ++APE I+
Sbjct: 137 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-----GTPYWMAPELIS 189
Query: 667 NNPISEKSDVYS 678
P + D++S
Sbjct: 190 RLPYGPEVDIWS 201
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 26/209 (12%)
Query: 493 NFSTKLGQGGFGSVYLGML---PDGIQ---VAVKKLESIGQG--KKEFSAEVTTIGNVHH 544
F +LG+ FG VY G L G Q VA+K L+ +G ++EF E + H
Sbjct: 29 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQH 88
Query: 545 LHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIF--------NSTEESR----FLSWNTRF 592
++V L G + + + Y +G L +++ ST++ R L
Sbjct: 89 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 148
Query: 593 NIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREE--SLVY 650
++ +A G+ YL +VH D+ NVL+ D K+SD GL + + + L+
Sbjct: 149 HLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 205
Query: 651 TTLRGTRGYLAPEWITNNPISEKSDVYSY 679
+L R ++APE I S SD++SY
Sbjct: 206 NSLLPIR-WMAPEAIMYGKFSIDSDIWSY 233
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 111/235 (47%), Gaps = 40/235 (17%)
Query: 453 NKRKRLTKFSQE-----DLEEDNFLEKISGMPTRFSYDDLCKATKNFSTKLGQGGFGSVY 507
+RKRL F + +L++D+F EKIS +LG G G V+
Sbjct: 4 QQRKRLEAFLTQKQKVGELKDDDF-EKIS--------------------ELGAGNGGVVF 42
Query: 508 -LGMLPDGIQVAVK--KLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAY 564
+ P G+ +A K LE + + E+ + + ++V G +
Sbjct: 43 KVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 102
Query: 565 EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVL 624
E++ GSLD+ + +++ + +++ + KGL YL E+ KI+H D+KP N+L
Sbjct: 103 EHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNIL 156
Query: 625 LDDNFTAKVSDFGLA-KLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
++ K+ DFG++ +L++ + + GTR Y++PE + S +SD++S
Sbjct: 157 VNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWS 207
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 498 LGQGGFGSVYLGMLPDGIQV-------AVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
LGQG FG V+L G +KK + + E + V+H +VKL
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 92
Query: 551 K-GFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
F EG L+ ++L G L ++E F + +F +A +A L +LH
Sbjct: 93 HYAFQTEGKLYLI-LDFLRGGDL---FTRLSKEVMFTEEDVKFYLA-ELALALDHLHS-- 145
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+ I++ D+KPEN+LLD+ K++DFGL+K E Y+ GT Y+APE +
Sbjct: 146 -LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVVNRRG 203
Query: 670 ISEKSDVYSY 679
++ +D +S+
Sbjct: 204 HTQSADWWSF 213
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 97/192 (50%), Gaps = 20/192 (10%)
Query: 493 NFSTKLGQGGFGSVYLGML-PDGIQVAVKKLESIGQGKKEFS-AEVTTIGNVHHLHLVKL 550
NF K+G+G G V + + G VAVKK++ Q ++E EV + + H ++V++
Sbjct: 35 NF-IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM 93
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
+ G + E+L G+L + ++ ++ + L + + L+ LH +
Sbjct: 94 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG- 147
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFG----LAKLMNREESLVYTTLRGTRGYLAPEWIT 666
++H DIK +++LL + K+SDFG ++K + R + LV GT ++APE I+
Sbjct: 148 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-----GTPYWMAPELIS 200
Query: 667 NNPISEKSDVYS 678
P + D++S
Sbjct: 201 RLPYGPEVDIWS 212
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 90/191 (47%), Gaps = 16/191 (8%)
Query: 497 KLGQGGFGSV---YLGMLPDGIQVAVKKLESIGQG---KKEFSAEVTTIGNVHHLHLVKL 550
+LG G FG+V Y M VAVK L++ K E AE + + + ++V++
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
G C E +L E G L+K++ +++R + + ++ G+ YL E
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLEES-- 126
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGT--RGYLAPEWITNN 668
VH D+ NVLL AK+SDFGL+K + +E+ G + APE I
Sbjct: 127 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 185
Query: 669 PISEKSDVYSY 679
S KSDV+S+
Sbjct: 186 KFSSKSDVWSF 196
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 97/192 (50%), Gaps = 20/192 (10%)
Query: 493 NFSTKLGQGGFGSVYLGML-PDGIQVAVKKLESIGQGKKEFS-AEVTTIGNVHHLHLVKL 550
NF K+G+G G V + + G VAVKK++ Q ++E EV + + H ++V++
Sbjct: 28 NF-IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM 86
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
+ G + E+L G+L + ++ ++ + L + + L+ LH +
Sbjct: 87 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG- 140
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFG----LAKLMNREESLVYTTLRGTRGYLAPEWIT 666
++H DIK +++LL + K+SDFG ++K + R + LV GT ++APE I+
Sbjct: 141 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-----GTPYWMAPELIS 193
Query: 667 NNPISEKSDVYS 678
P + D++S
Sbjct: 194 RLPYGPEVDIWS 205
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 17/190 (8%)
Query: 498 LGQGGFGSVYLGMLPDGIQV-------AVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
LGQG FG V+L G +KK + + E + V+H +VKL
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 551 K-GFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
F EG L+ ++L G L ++E F + +F +A +A L +LH
Sbjct: 92 HYAFQTEGKLYLI-LDFLRGGDL---FTRLSKEVMFTEEDVKFYLA-ELALALDHLHS-- 144
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+ I++ D+KPEN+LLD+ K++DFGL+K E Y+ GT Y+APE +
Sbjct: 145 -LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVVNRRG 202
Query: 670 ISEKSDVYSY 679
++ +D +S+
Sbjct: 203 HTQSADWWSF 212
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 90/191 (47%), Gaps = 16/191 (8%)
Query: 497 KLGQGGFGSV---YLGMLPDGIQVAVKKLESIGQG---KKEFSAEVTTIGNVHHLHLVKL 550
+LG G FG+V Y M VAVK L++ K E AE + + + ++V++
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
G C E +L E G L+K++ +++R + + ++ G+ YL E
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLEES-- 146
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRG--TRGYLAPEWITNN 668
VH D+ NVLL AK+SDFGL+K + +E+ G + APE I
Sbjct: 147 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 669 PISEKSDVYSY 679
S KSDV+S+
Sbjct: 206 KFSSKSDVWSF 216
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 90/191 (47%), Gaps = 16/191 (8%)
Query: 497 KLGQGGFGSV---YLGMLPDGIQVAVKKLESIGQG---KKEFSAEVTTIGNVHHLHLVKL 550
+LG G FG+V Y M VAVK L++ K E AE + + + ++V++
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
G C E +L E G L+K++ +++R + + ++ G+ YL E
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLEES-- 146
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRG--TRGYLAPEWITNN 668
VH D+ NVLL AK+SDFGL+K + +E+ G + APE I
Sbjct: 147 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 669 PISEKSDVYSY 679
S KSDV+S+
Sbjct: 206 KFSSKSDVWSF 216
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 26/209 (12%)
Query: 493 NFSTKLGQGGFGSVYLGML---PDGIQ---VAVKKLESIGQG--KKEFSAEVTTIGNVHH 544
F +LG+ FG VY G L G Q VA+K L+ +G ++EF E + H
Sbjct: 12 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQH 71
Query: 545 LHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIF--------NSTEESR----FLSWNTRF 592
++V L G + + + Y +G L +++ ST++ R L
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 593 NIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREE--SLVY 650
++ +A G+ YL +VH D+ NVL+ D K+SD GL + + + L+
Sbjct: 132 HLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLG 188
Query: 651 TTLRGTRGYLAPEWITNNPISEKSDVYSY 679
+L R ++APE I S SD++SY
Sbjct: 189 NSLLPIR-WMAPEAIMYGKFSIDSDIWSY 216
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 90/191 (47%), Gaps = 16/191 (8%)
Query: 497 KLGQGGFGSV---YLGMLPDGIQVAVKKLESIGQG---KKEFSAEVTTIGNVHHLHLVKL 550
+LG G FG+V Y M VAVK L++ K E AE + + + ++V++
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
G C E +L E G L+K++ +++R + + ++ G+ YL E
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLEES-- 124
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGT--RGYLAPEWITNN 668
VH D+ NVLL AK+SDFGL+K + +E+ G + APE I
Sbjct: 125 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 183
Query: 669 PISEKSDVYSY 679
S KSDV+S+
Sbjct: 184 KFSSKSDVWSF 194
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 90/191 (47%), Gaps = 16/191 (8%)
Query: 497 KLGQGGFGSV---YLGMLPDGIQVAVKKLESIGQG---KKEFSAEVTTIGNVHHLHLVKL 550
+LG G FG+V Y M VAVK L++ K E AE + + + ++V++
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
G C E +L E G L+K++ +++R + + ++ G+ YL E
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLEES-- 130
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGT--RGYLAPEWITNN 668
VH D+ NVLL AK+SDFGL+K + +E+ G + APE I
Sbjct: 131 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 189
Query: 669 PISEKSDVYSY 679
S KSDV+S+
Sbjct: 190 KFSSKSDVWSF 200
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 90/191 (47%), Gaps = 16/191 (8%)
Query: 497 KLGQGGFGSV---YLGMLPDGIQVAVKKLESIGQG---KKEFSAEVTTIGNVHHLHLVKL 550
+LG G FG+V Y M VAVK L++ K E AE + + + ++V++
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
G C E +L E G L+K++ +++R + + ++ G+ YL E
Sbjct: 92 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLEES-- 144
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRG--TRGYLAPEWITNN 668
VH D+ NVLL AK+SDFGL+K + +E+ G + APE I
Sbjct: 145 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 203
Query: 669 PISEKSDVYSY 679
S KSDV+S+
Sbjct: 204 KFSSKSDVWSF 214
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 90/191 (47%), Gaps = 16/191 (8%)
Query: 497 KLGQGGFGSV---YLGMLPDGIQVAVKKLESIGQG---KKEFSAEVTTIGNVHHLHLVKL 550
+LG G FG+V Y M VAVK L++ K E AE + + + ++V++
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
G C E +L E G L+K++ +++R + + ++ G+ YL E
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLEES-- 130
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGT--RGYLAPEWITNN 668
VH D+ NVLL AK+SDFGL+K + +E+ G + APE I
Sbjct: 131 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYY 189
Query: 669 PISEKSDVYSY 679
S KSDV+S+
Sbjct: 190 KFSSKSDVWSF 200
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 111/236 (47%), Gaps = 40/236 (16%)
Query: 452 HNKRKRLTKFSQE-----DLEEDNFLEKISGMPTRFSYDDLCKATKNFSTKLGQGGFGSV 506
+RKRL F + +L++D+F EKIS +LG G G V
Sbjct: 11 EQQRKRLEAFLTQKQKVGELKDDDF-EKIS--------------------ELGAGNGGVV 49
Query: 507 Y-LGMLPDGIQVAVK--KLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLA 563
+ + P G+ +A K LE + + E+ + + ++V G +
Sbjct: 50 FKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109
Query: 564 YEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENV 623
E++ GSLD+ + +++ + +++ + KGL YL E+ KI+H D+KP N+
Sbjct: 110 MEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNI 163
Query: 624 LLDDNFTAKVSDFGLA-KLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
L++ K+ DFG++ +L++ + + GTR Y++PE + S +SD++S
Sbjct: 164 LVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWS 215
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 29/207 (14%)
Query: 498 LGQGGFGSVYL----GMLPD----GIQVAVKKLESIGQGKK--EFSAEVTTIGNV-HHLH 546
LG+G FG V + G+ D + VAVK L+ K + +E+ + + H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWI-------------FNSTEESRFLSWNTRFN 593
++ L G C + + EY G+L +++ N E + +++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ-MTFKDLVS 161
Query: 594 IALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT- 652
+A+G+ YL + K +H D+ NVL+ +N K++DFGLA+ +N + TT
Sbjct: 162 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 653 LRGTRGYLAPEWITNNPISEKSDVYSY 679
R ++APE + + + +SDV+S+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSF 245
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 90/191 (47%), Gaps = 16/191 (8%)
Query: 497 KLGQGGFGSV---YLGMLPDGIQVAVKKLESIGQG---KKEFSAEVTTIGNVHHLHLVKL 550
+LG G FG+V Y M VAVK L++ K E AE + + + ++V++
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
G C E +L E G L+K++ +++R + + ++ G+ YL E
Sbjct: 84 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLEES-- 136
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGT--RGYLAPEWITNN 668
VH D+ NVLL AK+SDFGL+K + +E+ G + APE I
Sbjct: 137 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 195
Query: 669 PISEKSDVYSY 679
S KSDV+S+
Sbjct: 196 KFSSKSDVWSF 206
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 97/192 (50%), Gaps = 20/192 (10%)
Query: 493 NFSTKLGQGGFGSVYLGML-PDGIQVAVKKLESIGQGKKEFS-AEVTTIGNVHHLHLVKL 550
NF K+G+G G V + + G VAVKK++ Q ++E EV + + H ++V++
Sbjct: 155 NF-IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM 213
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
+ G + E+L G+L + ++ ++ + L + + L+ LH +
Sbjct: 214 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG- 267
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFG----LAKLMNREESLVYTTLRGTRGYLAPEWIT 666
++H DIK +++LL + K+SDFG ++K + R + LV GT ++APE I+
Sbjct: 268 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-----GTPYWMAPELIS 320
Query: 667 NNPISEKSDVYS 678
P + D++S
Sbjct: 321 RLPYGPEVDIWS 332
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 29/207 (14%)
Query: 498 LGQGGFGSVYL----GMLPD----GIQVAVKKLESIGQGKK--EFSAEVTTIGNV-HHLH 546
LG+G FG V + G+ D + VAVK L+ K + +E+ + + H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWI-------------FNSTEESRFLSWNTRFN 593
++ L G C + + EY G+L +++ N E + +++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQ-MTFKDLVS 161
Query: 594 IALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT- 652
+A+G+ YL + K +H D+ NVL+ +N K++DFGLA+ +N + TT
Sbjct: 162 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 653 LRGTRGYLAPEWITNNPISEKSDVYSY 679
R ++APE + + + +SDV+S+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSF 245
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 95/187 (50%), Gaps = 14/187 (7%)
Query: 496 TKLGQGGFGSVY-LGMLPDGIQVAVK--KLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
++LG G G V + P G+ +A K LE + + E+ + + ++V G
Sbjct: 22 SELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 81
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
+ E++ GSLD+ + +E++ + +++ + +GLAYL E+ +
Sbjct: 82 AFYSDGEISICMEHMDGGSLDQVL----KEAKRIPEEILGKVSIAVLRGLAYLREKHQ-- 135
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLA-KLMNREESLVYTTLRGTRGYLAPEWITNNPIS 671
I+H D+KP N+L++ K+ DFG++ +L++ + + GTR Y+APE + S
Sbjct: 136 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMAPERLQGTHYS 191
Query: 672 EKSDVYS 678
+SD++S
Sbjct: 192 VQSDIWS 198
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 19/193 (9%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVKKL-ESIG-QGKKEFSAEVTTIGNVHHLHLVKL 550
LG+G FG V L G VAVK L E G Q + + E+ + ++H H+VK
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 551 KGFCIEGAHR--LLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
KG C + + L EY+ GSL ++ + A + +G+AYLH +
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-----VGLAQLLLFAQQICEGMAYLHAQ 131
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRG--YLAPEWIT 666
+H + NVLLD++ K+ DFGLAK + G + APE +
Sbjct: 132 ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 188
Query: 667 NNPISEKSDVYSY 679
SDV+S+
Sbjct: 189 ECKFYYASDVWSF 201
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 19/193 (9%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVKKL-ESIG-QGKKEFSAEVTTIGNVHHLHLVKL 550
LG+G FG V L G VAVK L E G Q + + E+ + ++H H+VK
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 551 KGFCIEGAHR--LLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
KG C + + L EY+ GSL ++ + A + +G+AYLH +
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-----VGLAQLLLFAQQICEGMAYLHAQ 130
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRG--YLAPEWIT 666
+H + NVLLD++ K+ DFGLAK + G + APE +
Sbjct: 131 ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 187
Query: 667 NNPISEKSDVYSY 679
SDV+S+
Sbjct: 188 ECKFYYASDVWSF 200
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 97/192 (50%), Gaps = 20/192 (10%)
Query: 493 NFSTKLGQGGFGSVYLGML-PDGIQVAVKKLESIGQGKKEFS-AEVTTIGNVHHLHLVKL 550
NF K+G+G G V + + G VAVKK++ Q ++E EV + + H ++V++
Sbjct: 78 NF-IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM 136
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
+ G + E+L G+L + ++ ++ + L + + L+ LH +
Sbjct: 137 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG- 190
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFG----LAKLMNREESLVYTTLRGTRGYLAPEWIT 666
++H DIK +++LL + K+SDFG ++K + R + LV GT ++APE I+
Sbjct: 191 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-----GTPYWMAPELIS 243
Query: 667 NNPISEKSDVYS 678
P + D++S
Sbjct: 244 RLPYGPEVDIWS 255
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 25/227 (11%)
Query: 467 EEDNFLEKIS-----GMPTRFSYDDLCKATKNFSTKLGQGGFGSVYLG--MLPD--GIQV 517
E D++ E I MP+ Y+ + + +G+G FG V+ G M P+ + V
Sbjct: 363 ETDDYAEIIDEEDTYTMPSTRDYE-IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAV 421
Query: 518 AVKKLESIGQG--KKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKW 575
A+K ++ +++F E T+ H H+VKL G E ++ E G L +
Sbjct: 422 AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSF 480
Query: 576 IFNSTEESRF-LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVS 634
+ + +F L + A ++ LAYL + + VH DI NVL+ N K+
Sbjct: 481 L----QVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLG 533
Query: 635 DFGLAKLMNREESLVYTTLRGTR--GYLAPEWITNNPISEKSDVYSY 679
DFGL++ M E+S Y +G ++APE I + SDV+ +
Sbjct: 534 DFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 578
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 22/191 (11%)
Query: 496 TKLGQGGFGSVYL-----GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
++LG+G VY P ++V K ++ KK E+ + + H +++KL
Sbjct: 59 SELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-----KKIVRTEIGVLLRLSHPNIIKL 113
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
K L E + G L F+ E + S + + + +AYLHE
Sbjct: 114 KEIFETPTEISLVLELVTGGEL----FDRIVEKGYYSERDAADAVKQILEAVAYLHEN-- 167
Query: 611 VKIVHCDIKPENVLL---DDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
IVH D+KPEN+L + K++DFGL+K++ E ++ T+ GT GY APE +
Sbjct: 168 -GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV--EHQVLMKTVCGTPGYCAPEILRG 224
Query: 668 NPISEKSDVYS 678
+ D++S
Sbjct: 225 CAYGPEVDMWS 235
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 90/191 (47%), Gaps = 16/191 (8%)
Query: 497 KLGQGGFGSV---YLGMLPDGIQVAVKKLESIGQG---KKEFSAEVTTIGNVHHLHLVKL 550
+LG G FG+V Y M VAVK L++ K E AE + + + ++V++
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
G C E +L E G L+K++ +++R + + ++ G+ YL E
Sbjct: 436 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLEES-- 488
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRG--TRGYLAPEWITNN 668
VH D+ NVLL AK+SDFGL+K + +E+ G + APE I
Sbjct: 489 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 547
Query: 669 PISEKSDVYSY 679
S KSDV+S+
Sbjct: 548 KFSSKSDVWSF 558
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 29/207 (14%)
Query: 498 LGQGGFGSVYL----GMLPD----GIQVAVKKLESIGQGKK--EFSAEVTTIGNV-HHLH 546
LG+G FG V + G+ D + VAVK L+ K + +E+ + + H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWI-------------FNSTEESRFLSWNTRFN 593
++ L G C + + EY G+L +++ N E + +++ +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ-MTFKDLVS 161
Query: 594 IALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT- 652
+A+G+ YL + K +H D+ NVL+ +N K++DFGLA+ +N + TT
Sbjct: 162 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 653 LRGTRGYLAPEWITNNPISEKSDVYSY 679
R ++APE + + + +SDV+S+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSF 245
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 26/222 (11%)
Query: 481 RFSYD----DLCKATKNFSTKLGQGGFGSVY------LGMLPDGIQVAVKKLE--SIGQG 528
R YD + + N LG+G FG V + VAVK L+ +
Sbjct: 14 RLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSE 73
Query: 529 KKEFSAEVTTIGNV-HHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE---- 582
+ +E+ + ++ HHL++V L G C + G ++ E+ G+L ++ + E
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 583 ----SRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGL 638
FL+ + +AKG+ +L K +H D+ N+LL + K+ DFGL
Sbjct: 134 KDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGL 190
Query: 639 AKLMNREESLVYT-TLRGTRGYLAPEWITNNPISEKSDVYSY 679
A+ + ++ V R ++APE I + + +SDV+S+
Sbjct: 191 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 232
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 29/207 (14%)
Query: 498 LGQGGFGSVYL----GMLPD----GIQVAVKKLESIGQGKK--EFSAEVTTIGNV-HHLH 546
LG+G FG V + G+ D + VAVK L+ K + +E+ + + H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWI-------------FNSTEESRFLSWNTRFN 593
++ L G C + + EY G+L +++ N E + +++ +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ-MTFKDLVS 161
Query: 594 IALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT- 652
+A+G+ YL + K +H D+ NVL+ +N K++DFGLA+ +N + TT
Sbjct: 162 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 653 LRGTRGYLAPEWITNNPISEKSDVYSY 679
R ++APE + + + +SDV+S+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSF 245
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 12/186 (6%)
Query: 496 TKLGQGGFGSVY-LGMLPDGIQVAVK--KLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
++LG G G V+ + P G+ +A K LE + + E+ + + ++V G
Sbjct: 15 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 74
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
+ E++ GSLD+ + +++ + +++ + KGL YL E+ K
Sbjct: 75 AFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKH--K 128
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISE 672
I+H D+KP N+L++ K+ DFG++ + E + GTR Y++PE + S
Sbjct: 129 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE---MANEFVGTRSYMSPERLQGTHYSV 185
Query: 673 KSDVYS 678
+SD++S
Sbjct: 186 QSDIWS 191
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 489 KATKNFSTK--LGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSA---EVTTIGNV 542
K + N+ K LG+G F V + G++ A K + + ++F E +
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 543 HHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
H ++V+L E + L ++ + G L F F S + + + +
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESI 117
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF---TAKVSDFGLAKLMNREESLVYTTLRGTRGY 659
AY H IVH ++KPEN+LL K++DFGLA +N E+ + GT GY
Sbjct: 118 AYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA--WHGFAGTPGY 172
Query: 660 LAPEWITNNPISEKSDVYS 678
L+PE + +P S+ D+++
Sbjct: 173 LSPEVLKKDPYSKPVDIWA 191
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Query: 529 KKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSW 588
K E AE + + + ++V++ G C E +L E G L+K++ +++R +
Sbjct: 415 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKD 469
Query: 589 NTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESL 648
+ ++ G+ YL E VH D+ NVLL AK+SDFGL+K + +E+
Sbjct: 470 KNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 526
Query: 649 VYTTLRG--TRGYLAPEWITNNPISEKSDVYSY 679
G + APE I S KSDV+S+
Sbjct: 527 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 559
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 489 KATKNFSTK--LGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSA---EVTTIGNV 542
K + N+ K LG+G F V + G++ A K + + ++F E +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 543 HHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
H ++V+L E + L ++ + G L F F S + + + +
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESI 118
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF---TAKVSDFGLAKLMNREESLVYTTLRGTRGY 659
AY H IVH ++KPEN+LL K++DFGLA +N E+ + GT GY
Sbjct: 119 AYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA--WHGFAGTPGY 173
Query: 660 LAPEWITNNPISEKSDVYS 678
L+PE + +P S+ D+++
Sbjct: 174 LSPEVLKKDPYSKPVDIWA 192
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 477 GMPTRFSYDDLCKATKNFSTK--LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFS 533
G + F + K + N+ K LG+G F V + G++ A K + + ++F
Sbjct: 14 GRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ 73
Query: 534 A---EVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNT 590
E + H ++V+L E + L ++ + G L F F S
Sbjct: 74 KLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEAD 129
Query: 591 RFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNF---TAKVSDFGLAKLMNREES 647
+ + + +AY H IVH ++KPEN+LL K++DFGLA +N E+
Sbjct: 130 ASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA 186
Query: 648 LVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
+ GT GYL+PE + +P S+ D+++
Sbjct: 187 --WHGFAGTPGYLSPEVLKKDPYSKPVDIWA 215
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 29/207 (14%)
Query: 498 LGQGGFGSVYL----GMLPD----GIQVAVKKLESIGQGKK--EFSAEVTTIGNV-HHLH 546
LG+G FG V + G+ D + VAVK L+ K + +E+ + + H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWI-------------FNSTEESRFLSWNTRFN 593
++ L G C + + EY G+L +++ N E + +++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ-MTFKDLVS 161
Query: 594 IALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT- 652
+A+G+ YL + K +H D+ NVL+ +N K++DFGLA+ +N + TT
Sbjct: 162 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 653 LRGTRGYLAPEWITNNPISEKSDVYSY 679
R ++APE + + + +SDV+S+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSF 245
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 489 KATKNFSTK--LGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSA---EVTTIGNV 542
K + N+ K LG+G F V + G++ A K + + ++F E +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 543 HHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
H ++V+L E + L ++ + G L F F S + + + +
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESI 118
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF---TAKVSDFGLAKLMNREESLVYTTLRGTRGY 659
AY H IVH ++KPEN+LL K++DFGLA +N E+ + GT GY
Sbjct: 119 AYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA--WHGFAGTPGY 173
Query: 660 LAPEWITNNPISEKSDVYS 678
L+PE + +P S+ D+++
Sbjct: 174 LSPEVLKKDPYSKPVDIWA 192
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 17/190 (8%)
Query: 498 LGQGGFGSVYLG--MLPD--GIQVAVKKLESIGQG--KKEFSAEVTTIGNVHHLHLVKLK 551
+G+G FG V+ G M P+ + VA+K ++ +++F E T+ H H+VKL
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
G E ++ E G L ++ L + A ++ LAYL +
Sbjct: 106 GVITENPVWIIM-ELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESK--- 158
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR--GYLAPEWITNNP 669
+ VH DI NVL+ N K+ DFGL++ M E+S Y +G ++APE I
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRR 216
Query: 670 ISEKSDVYSY 679
+ SDV+ +
Sbjct: 217 FTSASDVWMF 226
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 27/206 (13%)
Query: 498 LGQGGFGSVYL----GMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNV-HHLH 546
LG+G FG V L G+ D +VAVK L+S K + +E+ + + H +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWI-----------FN-STEESRFLSWNTRFNI 594
++ L G C + + EY G+L +++ FN S LS +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 595 ALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-L 653
A +A+G+ YL + K +H D+ NVL+ ++ K++DFGLA+ ++ + TT
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 654 RGTRGYLAPEWITNNPISEKSDVYSY 679
R ++APE + + + +SDV+S+
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSF 238
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 17/190 (8%)
Query: 498 LGQGGFGSVYLG--MLPD--GIQVAVKKLESIGQG--KKEFSAEVTTIGNVHHLHLVKLK 551
+G+G FG V+ G M P+ + VA+K ++ +++F E T+ H H+VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
G E ++ E G L ++ L + A ++ LAYL +
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESK--- 130
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR--GYLAPEWITNNP 669
+ VH DI NVL+ N K+ DFGL++ M E+S Y +G ++APE I
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 670 ISEKSDVYSY 679
+ SDV+ +
Sbjct: 189 FTSASDVWMF 198
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 17/190 (8%)
Query: 498 LGQGGFGSVYLG--MLPD--GIQVAVKKLESIGQG--KKEFSAEVTTIGNVHHLHLVKLK 551
+G+G FG V+ G M P+ + VA+K ++ +++F E T+ H H+VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
G E ++ E G L ++ L + A ++ LAYL +
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESK--- 130
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR--GYLAPEWITNNP 669
+ VH DI NVL+ N K+ DFGL++ M E+S Y +G ++APE I
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 670 ISEKSDVYSY 679
+ SDV+ +
Sbjct: 189 FTSASDVWMF 198
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 17/190 (8%)
Query: 498 LGQGGFGSVYLG--MLPD--GIQVAVKKLESIGQG--KKEFSAEVTTIGNVHHLHLVKLK 551
+G+G FG V+ G M P+ + VA+K ++ +++F E T+ H H+VKL
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
G E ++ E G L ++ L + A ++ LAYL +
Sbjct: 80 GVITENPVWIIM-ELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESK--- 132
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR--GYLAPEWITNNP 669
+ VH DI NVL+ N K+ DFGL++ M E+S Y +G ++APE I
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRR 190
Query: 670 ISEKSDVYSY 679
+ SDV+ +
Sbjct: 191 FTSASDVWMF 200
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 496 TKLGQGGFGSVY-LGMLPDGIQVAVK--KLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
++LG G G V+ + P G+ +A K LE + + E+ + + ++V G
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
+ E++ GSLD+ + +++ + +++ + KGL YL E+ K
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKH--K 125
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLA-KLMNREESLVYTTLRGTRGYLAPEWITNNPIS 671
I+H D+KP N+L++ K+ DFG++ +L++ + + GTR Y++PE + S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYS 181
Query: 672 EKSDVYS 678
+SD++S
Sbjct: 182 VQSDIWS 188
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 496 TKLGQGGFGSVY-LGMLPDGIQVAVK--KLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
++LG G G V+ + P G+ +A K LE + + E+ + + ++V G
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
+ E++ GSLD+ + +++ + +++ + KGL YL E+ K
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKH--K 125
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLA-KLMNREESLVYTTLRGTRGYLAPEWITNNPIS 671
I+H D+KP N+L++ K+ DFG++ +L++ + + GTR Y++PE + S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYS 181
Query: 672 EKSDVYS 678
+SD++S
Sbjct: 182 VQSDIWS 188
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 17/190 (8%)
Query: 498 LGQGGFGSVYLG--MLPD--GIQVAVKKLESIGQG--KKEFSAEVTTIGNVHHLHLVKLK 551
+G+G FG V+ G M P+ + VA+K ++ +++F E T+ H H+VKL
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
G E ++ E G L ++ L + A ++ LAYL +
Sbjct: 75 GVITENPVWIIM-ELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESK--- 127
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR--GYLAPEWITNNP 669
+ VH DI NVL+ N K+ DFGL++ M E+S Y +G ++APE I
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRR 185
Query: 670 ISEKSDVYSY 679
+ SDV+ +
Sbjct: 186 FTSASDVWMF 195
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 498 LGQGGFGSVYL----GMLPD----GIQVAVKKL--ESIGQGKKEFSAEVTTIGNV-HHLH 546
LG+G FG V + G+ D + VAVK L ++ + + +E+ + + H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWI-------------FNSTEESRFLSWNTRFN 593
++ L G C + + EY G+L +++ N E + +++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ-MTFKDLVS 161
Query: 594 IALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT- 652
+A+G+ YL + K +H D+ NVL+ +N K++DFGLA+ +N + TT
Sbjct: 162 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 653 LRGTRGYLAPEWITNNPISEKSDVYSY 679
R ++APE + + + +SDV+S+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSF 245
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 514 GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLD 573
+++ K++E+ Q KE +A G H ++VKL + H L E L G L
Sbjct: 40 AVKIISKRMEANTQ--KEITALKLCEG---HPNIVKLHEVFHDQLHTFLVMELLNGGEL- 93
Query: 574 KWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLL---DDNFT 630
F ++ + S I + ++++H+ V +VH D+KPEN+L +DN
Sbjct: 94 ---FERIKKKKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLE 147
Query: 631 AKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
K+ DFG A+L + + T T Y APE + N E D++S
Sbjct: 148 IKIIDFGFARLKPPDNQPLKTPC-FTLHYAAPELLNQNGYDESCDLWS 194
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 496 TKLGQGGFGSVY-LGMLPDGIQVAVK--KLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
++LG G G V+ + P G+ +A K LE + + E+ + + ++V G
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
+ E++ GSLD+ + +++ + +++ + KGL YL E+ K
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKH--K 125
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLA-KLMNREESLVYTTLRGTRGYLAPEWITNNPIS 671
I+H D+KP N+L++ K+ DFG++ +L++ + + GTR Y++PE + S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYS 181
Query: 672 EKSDVYS 678
+SD++S
Sbjct: 182 VQSDIWS 188
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 26/222 (11%)
Query: 481 RFSYD----DLCKATKNFSTKLGQGGFGSVY------LGMLPDGIQVAVKKLE--SIGQG 528
R YD + + N LG+G FG V + VAVK L+ +
Sbjct: 14 RLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSE 73
Query: 529 KKEFSAEVTTIGNV-HHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE---- 582
+ +E+ + ++ HHL++V L G C + G ++ E+ G+L ++ + E
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 583 ----SRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGL 638
FL+ + +AKG+ +L K +H D+ N+LL + K+ DFGL
Sbjct: 134 KDLYKDFLTLEHLICYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGL 190
Query: 639 AKLMNREESLVYT-TLRGTRGYLAPEWITNNPISEKSDVYSY 679
A+ + ++ V R ++APE I + + +SDV+S+
Sbjct: 191 ARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 232
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 17/190 (8%)
Query: 498 LGQGGFGSVYLG--MLPD--GIQVAVKKLESIGQG--KKEFSAEVTTIGNVHHLHLVKLK 551
+G+G FG V+ G M P+ + VA+K ++ +++F E T+ H H+VKL
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
G E ++ E G L ++ L + A ++ LAYL +
Sbjct: 81 GVITENPVWIIM-ELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESK--- 133
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR--GYLAPEWITNNP 669
+ VH DI NVL+ N K+ DFGL++ M E+S Y +G ++APE I
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRR 191
Query: 670 ISEKSDVYSY 679
+ SDV+ +
Sbjct: 192 FTSASDVWMF 201
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 17/190 (8%)
Query: 498 LGQGGFGSVYLG--MLPD--GIQVAVKKLESIGQG--KKEFSAEVTTIGNVHHLHLVKLK 551
+G+G FG V+ G M P+ + VA+K ++ +++F E T+ H H+VKL
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
G E ++ E G L ++ L + A ++ LAYL +
Sbjct: 83 GVITENPVWIIM-ELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESK--- 135
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR--GYLAPEWITNNP 669
+ VH DI NVL+ N K+ DFGL++ M E+S Y +G ++APE I
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRR 193
Query: 670 ISEKSDVYSY 679
+ SDV+ +
Sbjct: 194 FTSASDVWMF 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 496 TKLGQGGFGSVY-LGMLPDGIQVAVK--KLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
++LG G G V+ + P G+ +A K LE + + E+ + + ++V G
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
+ E++ GSLD+ + +++ + +++ + KGL YL E+ K
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKH--K 125
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLA-KLMNREESLVYTTLRGTRGYLAPEWITNNPIS 671
I+H D+KP N+L++ K+ DFG++ +L++ + + GTR Y++PE + S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYS 181
Query: 672 EKSDVYS 678
+SD++S
Sbjct: 182 VQSDIWS 188
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 98/207 (47%), Gaps = 29/207 (14%)
Query: 498 LGQGGFGSVYL----GMLPD----GIQVAVKKLESIGQGKK--EFSAEVTTIGNV-HHLH 546
LG+G FG V + G+ D + VAVK L+ K + +E+ + + H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWI-------------FNSTEESRFLSWNTRFN 593
++ L G C + + EY G+L +++ N E + +++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ-MTFKDLVS 161
Query: 594 IALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT- 652
+A+G+ YL + K +H D+ NVL+ +N +++DFGLA+ +N + TT
Sbjct: 162 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 653 LRGTRGYLAPEWITNNPISEKSDVYSY 679
R ++APE + + + +SDV+S+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSF 245
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 94/187 (50%), Gaps = 14/187 (7%)
Query: 496 TKLGQGGFGSVY-LGMLPDGIQVAVK--KLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
++LG G G V+ + P G+ +A K LE + + E+ + + ++V G
Sbjct: 12 SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYG 71
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
+ E++ GSLD+ + +++ + +++ + KGL YL E+ K
Sbjct: 72 AFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKH--K 125
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLA-KLMNREESLVYTTLRGTRGYLAPEWITNNPIS 671
I+H D+KP N+L++ K+ DFG++ +L++ + + GTR Y++PE + S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYS 181
Query: 672 EKSDVYS 678
+SD++S
Sbjct: 182 VQSDIWS 188
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 33/201 (16%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIE 556
+G GGFG V+ DG +K+ + ++ EV + + H+++V G C +
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKR---VKYNNEKAEREVKALAKLDHVNIVHYNG-CWD 74
Query: 557 G-----------AHR------LLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIAL--G 597
G + R + E+ G+L++WI E+ R + + L
Sbjct: 75 GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI----EKRRGEKLDKVLALELFEQ 130
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
+ KG+ Y+H + K+++ D+KP N+ L D K+ DFGL + + + +GT
Sbjct: 131 ITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS--KGTL 185
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y++PE I++ ++ D+Y+
Sbjct: 186 RYMSPEQISSQDYGKEVDLYA 206
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFC--I 555
+G+G +G+VY G L D VAVK ++ F E N++ + L++ I
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVFSF--ANRQNFINE----KNIYRVPLMEHDNIARFI 73
Query: 556 EGAHR---------LLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
G R LL EY NGSL K++ T + W + +A + +GLAYLH
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD-----WVSSCRLAHSVTRGLAYLH 128
Query: 607 EEC------EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NR-----EESLVYTTL 653
E + I H D+ NVL+ ++ T +SDFGL+ + NR EE +
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 654 RGTRGYLAPE 663
GT Y+APE
Sbjct: 189 VGTIRYMAPE 198
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 29/207 (14%)
Query: 498 LGQGGFGSVYL----GMLPD----GIQVAVKKLESIGQGKK--EFSAEVTTIGNV-HHLH 546
LG+G FG V + G+ D + VAVK L+ K + +E+ + + H +
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWI-------------FNSTEESRFLSWNTRFN 593
++ L G C + + EY G+L +++ N E + +++ +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ-MTFKDLVS 148
Query: 594 IALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTL 653
+A+G+ YL + K +H D+ NVL+ +N K++DFGLA+ +N + TT
Sbjct: 149 CTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 654 -RGTRGYLAPEWITNNPISEKSDVYSY 679
R ++APE + + + +SDV+S+
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSF 232
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 23/187 (12%)
Query: 494 FSTKLGQGGFGSVYLGMLPD-----GIQVAVKKLESIGQGKKEFSA-----EVTTIGNVH 543
S LG G G V L I++ K+ +IG ++ A E+ + ++
Sbjct: 139 MSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN 198
Query: 544 HLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLA 603
H ++K+K F + + E + G L F+ ++ L T M +
Sbjct: 199 HPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKLYFYQMLLAVQ 253
Query: 604 YLHEECEVKIVHCDIKPENVLL---DDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYL 660
YLHE I+H D+KPENVLL +++ K++DFG +K++ E+ + TL GT YL
Sbjct: 254 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYL 308
Query: 661 APEWITN 667
APE + +
Sbjct: 309 APEVLVS 315
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 23/187 (12%)
Query: 494 FSTKLGQGGFGSVYLGMLPD-----GIQVAVKKLESIGQGKKEFSA-----EVTTIGNVH 543
S LG G G V L I++ K+ +IG ++ A E+ + ++
Sbjct: 153 MSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN 212
Query: 544 HLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLA 603
H ++K+K F + + E + G L F+ ++ L T M +
Sbjct: 213 HPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKLYFYQMLLAVQ 267
Query: 604 YLHEECEVKIVHCDIKPENVLL---DDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYL 660
YLHE I+H D+KPENVLL +++ K++DFG +K++ E+ + TL GT YL
Sbjct: 268 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYL 322
Query: 661 APEWITN 667
APE + +
Sbjct: 323 APEVLVS 329
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 29/207 (14%)
Query: 498 LGQGGFGSVYL----GMLPD----GIQVAVKKLESIGQGKK--EFSAEVTTIGNV-HHLH 546
LG+G FG V + G+ D + VAVK L+ K + +E+ + + H +
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWI-------------FNSTEESRFLSWNTRFN 593
++ L G C + + EY G+L +++ N E + +++ +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ-MTFKDLVS 207
Query: 594 IALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTL 653
+A+G+ YL + K +H D+ NVL+ +N K++DFGLA+ +N + TT
Sbjct: 208 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 654 -RGTRGYLAPEWITNNPISEKSDVYSY 679
R ++APE + + + +SDV+S+
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSF 291
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 29/207 (14%)
Query: 498 LGQGGFGSVYL----GMLPD----GIQVAVKKLESIGQGKK--EFSAEVTTIGNV-HHLH 546
LG+G FG V + G+ D + VAVK L+ K + +E+ + + H +
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWI-------------FNSTEESRFLSWNTRFN 593
++ L G C + + EY G+L +++ N E + +++ +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ-MTFKDLVS 150
Query: 594 IALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT- 652
+A+G+ YL + K +H D+ NVL+ +N K++DFGLA+ +N + TT
Sbjct: 151 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 653 LRGTRGYLAPEWITNNPISEKSDVYSY 679
R ++APE + + + +SDV+S+
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSF 234
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVK--KLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGF 553
KLG G + +VY G+ G+ VA+K KL+S E++ + + H ++V+L
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDV 71
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNST--EESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
L +E++ N L K++ + T R L N + +GLA+ HE
Sbjct: 72 IHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN--- 127
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAK 640
KI+H D+KP+N+L++ K+ DFGLA+
Sbjct: 128 KILHRDLKPQNLLINKRGQLKLGDFGLAR 156
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 29/207 (14%)
Query: 498 LGQGGFGSVYL----GMLPD----GIQVAVKKLESIGQGKK--EFSAEVTTIGNV-HHLH 546
LG+G FG V + G+ D + VAVK L+ K + +E+ + + H +
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWI-------------FNSTEESRFLSWNTRFN 593
++ L G C + + EY G+L +++ N E + +++ +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ-MTFKDLVS 153
Query: 594 IALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT- 652
+A+G+ YL + K +H D+ NVL+ +N K++DFGLA+ +N + TT
Sbjct: 154 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 653 LRGTRGYLAPEWITNNPISEKSDVYSY 679
R ++APE + + + +SDV+S+
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSF 237
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 17/192 (8%)
Query: 497 KLGQGGFGSV-YLGMLPDGIQVAVKKLESI--GQGKKEFSAEV-TTIGNVHHLHLVKLKG 552
+LG+G +G V + +P G +AVK++ + Q +K ++ ++ V V G
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
+ E L + SLDK+ ++ + + + IA+ + K L +LH ++
Sbjct: 118 ALFREGDVWICME-LMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH--SKLS 174
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP--- 669
++H D+KP NVL++ K+ DFG++ + +S+ T G + Y+APE I NP
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGISGYLV--DSVAKTIDAGCKPYMAPERI--NPELN 230
Query: 670 ---ISEKSDVYS 678
S KSD++S
Sbjct: 231 QKGYSVKSDIWS 242
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 27/206 (13%)
Query: 498 LGQGGFGSVYL----GMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNV-HHLH 546
LG+G FG V L G+ D +VAVK L+S K + +E+ + + H +
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFN------------I 594
++ L G C + + EY G+L +++ S+N N
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 595 ALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-L 653
A +A+G+ YL + K +H D+ NVL+ ++ K++DFGLA+ ++ + TT
Sbjct: 148 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 654 RGTRGYLAPEWITNNPISEKSDVYSY 679
R ++APE + + + +SDV+S+
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSF 230
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 27/206 (13%)
Query: 498 LGQGGFGSVYL----GMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNV-HHLH 546
LG+G FG V L G+ D +VAVK L+S K + +E+ + + H +
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFN------------I 594
++ L G C + + EY G+L +++ S+N N
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 595 ALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-L 653
A +A+G+ YL + K +H D+ NVL+ ++ K++DFGLA+ ++ + TT
Sbjct: 145 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 654 RGTRGYLAPEWITNNPISEKSDVYSY 679
R ++APE + + + +SDV+S+
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSF 227
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 27/206 (13%)
Query: 498 LGQGGFGSVYL----GMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNV-HHLH 546
LG+G FG V L G+ D +VAVK L+S K + +E+ + + H +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFN------------I 594
++ L G C + + EY G+L +++ S+N N
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 595 ALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-L 653
A +A+G+ YL + K +H D+ NVL+ ++ K++DFGLA+ ++ + TT
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 654 RGTRGYLAPEWITNNPISEKSDVYSY 679
R ++APE + + + +SDV+S+
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSF 238
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 27/206 (13%)
Query: 498 LGQGGFGSVYL----GMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNV-HHLH 546
LG+G FG V L G+ D +VAVK L+S K + +E+ + + H +
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFN------------I 594
++ L G C + + EY G+L +++ S+N N
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 595 ALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-L 653
A +A+G+ YL + K +H D+ NVL+ ++ K++DFGLA+ ++ + TT
Sbjct: 149 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 654 RGTRGYLAPEWITNNPISEKSDVYSY 679
R ++APE + + + +SDV+S+
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSF 231
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 481 RFSYD----DLCKATKNFSTKLGQGGFGSVY------LGMLPDGIQVAVKKLE--SIGQG 528
R YD + + N LG+G FG V + VAVK L+ +
Sbjct: 15 RLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 74
Query: 529 KKEFSAEVTTIGNV-HHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE---- 582
+ +E+ + ++ HHL++V L G C + G ++ E+ G+L ++ + E
Sbjct: 75 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 134
Query: 583 -------SRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSD 635
FL+ + +AKG+ +L K +H D+ N+LL + K+ D
Sbjct: 135 KTPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICD 191
Query: 636 FGLAKLMNREESLVYT-TLRGTRGYLAPEWITNNPISEKSDVYSY 679
FGLA+ + ++ V R ++APE I + + +SDV+S+
Sbjct: 192 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 27/206 (13%)
Query: 498 LGQGGFGSVYL----GMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNV-HHLH 546
LG+G FG V L G+ D +VAVK L+S K + +E+ + + H +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFN------------I 594
++ L G C + + EY G+L +++ S+N N
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 595 ALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-L 653
A +A+G+ YL + K +H D+ NVL+ ++ K++DFGLA+ ++ + TT
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 654 RGTRGYLAPEWITNNPISEKSDVYSY 679
R ++APE + + + +SDV+S+
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSF 238
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 27/206 (13%)
Query: 498 LGQGGFGSVYL----GMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNV-HHLH 546
LG+G FG V L G+ D +VAVK L+S K + +E+ + + H +
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFN------------I 594
++ L G C + + EY G+L +++ S+N N
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 595 ALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-L 653
A +A+G+ YL + K +H D+ NVL+ ++ K++DFGLA+ ++ + TT
Sbjct: 197 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 654 RGTRGYLAPEWITNNPISEKSDVYSY 679
R ++APE + + + +SDV+S+
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSF 279
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 19/189 (10%)
Query: 496 TKLGQGGFGSVYLGMLP-DGIQVAVKKLESIGQGKKEFS-AEVTTIGNVHHLHLVKLKGF 553
K+G+G G V L G QVAVK ++ Q ++E EV + + H ++V++
Sbjct: 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKI 613
+ G + E+L G+L + L+ + + + LAYLH + +
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIVSQVR-----LNEEQIATVCEAVLQALAYLHAQ---GV 162
Query: 614 VHCDIKPENVLLDDNFTAKVSDFG----LAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+H DIK +++LL + K+SDFG ++K + + + LV GT ++APE I+ +
Sbjct: 163 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV-----GTPYWMAPEVISRSL 217
Query: 670 ISEKSDVYS 678
+ + D++S
Sbjct: 218 YATEVDIWS 226
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 23/187 (12%)
Query: 494 FSTKLGQGGFGSVYLGMLPD-----GIQVAVKKLESIGQGKKEFSA-----EVTTIGNVH 543
S LG G G V L I++ K+ +IG ++ A E+ + ++
Sbjct: 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 544 HLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLA 603
H ++K+K F + + E + G L F+ ++ L T M +
Sbjct: 74 HPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 604 YLHEECEVKIVHCDIKPENVLL---DDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYL 660
YLHE I+H D+KPENVLL +++ K++DFG +K++ E+ + TL GT YL
Sbjct: 129 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYL 183
Query: 661 APEWITN 667
APE + +
Sbjct: 184 APEVLVS 190
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 23/187 (12%)
Query: 494 FSTKLGQGGFGSVYLGMLPD-----GIQVAVKKLESIGQGKKEFSA-----EVTTIGNVH 543
S LG G G V L I++ K+ +IG ++ A E+ + ++
Sbjct: 13 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 72
Query: 544 HLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLA 603
H ++K+K F + + E + G L F+ ++ L T M +
Sbjct: 73 HPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKLYFYQMLLAVQ 127
Query: 604 YLHEECEVKIVHCDIKPENVLL---DDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYL 660
YLHE I+H D+KPENVLL +++ K++DFG +K++ E+ + TL GT YL
Sbjct: 128 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYL 182
Query: 661 APEWITN 667
APE + +
Sbjct: 183 APEVLVS 189
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 89/195 (45%), Gaps = 23/195 (11%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGIQ---VAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVK 549
+F +G G FG L + D + VAVK +E + E+ ++ H ++V+
Sbjct: 23 DFVKDIGSGNFGVARL--MRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVR 80
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
K + H + EY G L + I N+ RF RF + G++Y H
Sbjct: 81 FKEVILTPTHLAIIMEYASGGELYERICNA---GRFSEDEARFFFQ-QLLSGVSYCHS-- 134
Query: 610 EVKIVHCDIKPENVLLDDNFTA--KVSDFGLAK---LMNREESLVYTTLRGTRGYLAPEW 664
++I H D+K EN LLD + K+ DFG +K L ++ +S V GT Y+APE
Sbjct: 135 -MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-----GTPAYIAPEV 188
Query: 665 ITNNPISEK-SDVYS 678
+ K +DV+S
Sbjct: 189 LLRQEYDGKIADVWS 203
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 23/187 (12%)
Query: 494 FSTKLGQGGFGSVYLGMLPD-----GIQVAVKKLESIGQGKKEFSA-----EVTTIGNVH 543
S LG G G V L I++ K+ +IG ++ A E+ + ++
Sbjct: 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 544 HLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLA 603
H ++K+K F + + E + G L F+ ++ L T M +
Sbjct: 74 HPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 604 YLHEECEVKIVHCDIKPENVLL---DDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYL 660
YLHE I+H D+KPENVLL +++ K++DFG +K++ E+ + TL GT YL
Sbjct: 129 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYL 183
Query: 661 APEWITN 667
APE + +
Sbjct: 184 APEVLVS 190
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
G ++E EV+ + V H +++ L +L E + G L F+ +
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL----FDFLAQKES 111
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENV-LLDDNFT---AKVSDFGLAKL 641
LS + + G+ YLH + KI H D+KPEN+ LLD N K+ DFGLA
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 642 MNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
+ E+ + + + GT ++APE + P+ ++D++S
Sbjct: 169 I--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 203
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
G ++E EV+ + V H +++ L +L E + G L F+ +
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL----FDFLAQKES 111
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENV-LLDDNFT---AKVSDFGLAKL 641
LS + + G+ YLH + KI H D+KPEN+ LLD N K+ DFGLA
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 642 MNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
+ E+ + + + GT ++APE + P+ ++D++S
Sbjct: 169 I--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 203
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 10/144 (6%)
Query: 523 ESIGQGKKEFSAEVTTIGNVH-HLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTE 581
E + + ++ EV + V H ++++LK L ++ + G L F+
Sbjct: 61 EEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL----FDYLT 116
Query: 582 ESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKL 641
E LS I + + + LH+ + IVH D+KPEN+LLDD+ K++DFG +
Sbjct: 117 EKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQ 173
Query: 642 MNREESLVYTTLRGTRGYLAPEWI 665
++ E L ++ GT YLAPE I
Sbjct: 174 LDPGEKL--RSVCGTPSYLAPEII 195
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 23/187 (12%)
Query: 494 FSTKLGQGGFGSVYLGMLPD-----GIQVAVKKLESIGQGKKEFSA-----EVTTIGNVH 543
S LG G G V L I++ K+ +IG ++ A E+ + ++
Sbjct: 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 73
Query: 544 HLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLA 603
H ++K+K F + + E + G L F+ ++ L T M +
Sbjct: 74 HPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 604 YLHEECEVKIVHCDIKPENVLL---DDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYL 660
YLHE I+H D+KPENVLL +++ K++DFG +K++ E+ + TL GT YL
Sbjct: 129 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYL 183
Query: 661 APEWITN 667
APE + +
Sbjct: 184 APEVLVS 190
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
G ++E EV+ + V H +++ L +L E + G L F+ +
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL----FDFLAQKES 111
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENV-LLDDNFT---AKVSDFGLAKL 641
LS + + G+ YLH + KI H D+KPEN+ LLD N K+ DFGLA
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 642 MNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
+ E+ + + + GT ++APE + P+ ++D++S
Sbjct: 169 I--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 203
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
G ++E EV+ + V H +++ L +L E + G L F+ +
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL----FDFLAQKES 111
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENV-LLDDNFT---AKVSDFGLAKL 641
LS + + G+ YLH + KI H D+KPEN+ LLD N K+ DFGLA
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 642 MNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
+ E+ + + + GT ++APE + P+ ++D++S
Sbjct: 169 I--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 203
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 88/194 (45%), Gaps = 23/194 (11%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVT 537
P SY D + +G G FG VY L D G VA+KK + Q K+ + E+
Sbjct: 17 PQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQ 65
Query: 538 TIGNVHHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIA 595
+ + H ++V+L+ F G + + Y L + + ++ SR +
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 125
Query: 596 LGMA---KGLAYLHEECEVKIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNREESLVYT 651
L M + LAY+H I H DIKP+N+LLD D K+ DFG AK + R E V
Sbjct: 126 LYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX 182
Query: 652 TLRGTRGYLAPEWI 665
+R Y APE I
Sbjct: 183 IC--SRYYRAPELI 194
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
G ++E EV+ + V H +++ L +L E + G L F+ +
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL----FDFLAQKES 111
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENV-LLDDNFT---AKVSDFGLAKL 641
LS + + G+ YLH + KI H D+KPEN+ LLD N K+ DFGLA
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 642 MNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
+ E+ + + + GT ++APE + P+ ++D++S
Sbjct: 169 I--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 203
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 23/187 (12%)
Query: 494 FSTKLGQGGFGSVYLGMLPD-----GIQVAVKKLESIGQGKKEFSA-----EVTTIGNVH 543
S LG G G V L I++ K+ +IG ++ A E+ + ++
Sbjct: 20 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN 79
Query: 544 HLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLA 603
H ++K+K F + + E + G L F+ ++ L T M +
Sbjct: 80 HPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKLYFYQMLLAVQ 134
Query: 604 YLHEECEVKIVHCDIKPENVLL---DDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYL 660
YLHE I+H D+KPENVLL +++ K++DFG +K++ E+ + TL GT YL
Sbjct: 135 YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYL 189
Query: 661 APEWITN 667
APE + +
Sbjct: 190 APEVLVS 196
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 10/144 (6%)
Query: 523 ESIGQGKKEFSAEVTTIGNVH-HLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTE 581
E + + ++ EV + V H ++++LK L ++ + G L F+
Sbjct: 48 EEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL----FDYLT 103
Query: 582 ESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKL 641
E LS I + + + LH+ + IVH D+KPEN+LLDD+ K++DFG +
Sbjct: 104 EKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQ 160
Query: 642 MNREESLVYTTLRGTRGYLAPEWI 665
++ E L + GT YLAPE I
Sbjct: 161 LDPGEKL--REVCGTPSYLAPEII 182
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 25/194 (12%)
Query: 498 LGQGGFGSVYLG--MLPD--GIQVAVKKLESIGQG--KKEFSAEVTTIGNVHHLHLVKLK 551
+G+G FG V+ G M P+ + VA+K ++ +++F E T+ H H+VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF-LSWNTRFNIALGMAKGLAYLHEECE 610
G E ++ E G L ++ + +F L + A ++ LAYL +
Sbjct: 78 GVITENPVWII-MELCTLGELRSFL----QVRKFSLDLASLILYAYQLSTALAYLESK-- 130
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRG-----YLAPEWI 665
+ VH DI NVL+ N K+ DFGL++ M E+S T + ++G ++APE I
Sbjct: 131 -RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDS---TXXKASKGKLPIKWMAPESI 184
Query: 666 TNNPISEKSDVYSY 679
+ SDV+ +
Sbjct: 185 NFRRFTSASDVWMF 198
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 80/177 (45%), Gaps = 15/177 (8%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKL-ESIGQGKKEFSAEVT---TIGNVHHLHLVKLKG 552
LG+G FG V L G A+K L + + K E + VT + N H L LK
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK- 71
Query: 553 FCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ + RL EY G L F+ + E F RF A + L YLH
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGA-EIVSALEYLHSR--- 124
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNN 668
+V+ DIK EN++LD + K++DFGL K + T GT YLAPE + +N
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEVLEDN 180
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 86/192 (44%), Gaps = 25/192 (13%)
Query: 497 KLGQGGFGSVY-LGMLPDGIQVAVKKLESIGQGKKEFSAE-VTTIGNVHHLHLVKLKGFC 554
+LG+G FG V+ + G Q AVKK+ + F E + + +V L G
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKVRL-----EVFRVEELVACAGLSSPRIVPLYGAV 133
Query: 555 IEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMA-KGLAYLHEECEV 611
EG + E L GSL + I E R L + LG A +GL YLH
Sbjct: 134 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY-------LGQALEGLEYLHTR--- 183
Query: 612 KIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNRE----ESLVYTTLRGTRGYLAPEWIT 666
+I+H D+K +NVLL D A + DFG A + + L + GT ++APE +
Sbjct: 184 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 243
Query: 667 NNPISEKSDVYS 678
P K D++S
Sbjct: 244 GKPCDAKVDIWS 255
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 25/227 (11%)
Query: 467 EEDNFLEKIS-----GMPTRFSYDDLCKATKNFSTKLGQGGFGSVYLG--MLPD--GIQV 517
E D++ E I MP+ Y+ + + +G+G FG V+ G M P+ + V
Sbjct: 363 ETDDYAEIIDEEDTYTMPSTRDYE-IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAV 421
Query: 518 AVKKLESIGQG--KKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKW 575
A+K ++ +++F E T+ H H+VKL G E ++ E G L +
Sbjct: 422 AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSF 480
Query: 576 IFNSTEESRF-LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVS 634
+ + +F L + A ++ LAYL + + VH DI NVL+ K+
Sbjct: 481 L----QVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLG 533
Query: 635 DFGLAKLMNREESLVYTTLRGTR--GYLAPEWITNNPISEKSDVYSY 679
DFGL++ M E+S Y +G ++APE I + SDV+ +
Sbjct: 534 DFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 578
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 29/207 (14%)
Query: 498 LGQGGFGSVYL----GMLPD----GIQVAVKKLESIGQGKK--EFSAEVTTIGNV-HHLH 546
LG+G FG V + G+ D + VAVK L+ K + +E+ + + H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWI-------------FNSTEESRFLSWNTRFN 593
++ L G C + + Y G+L +++ N E + +++ +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQ-MTFKDLVS 161
Query: 594 IALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT- 652
+A+G+ YL + K +H D+ NVL+ +N K++DFGLA+ +N + TT
Sbjct: 162 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 653 LRGTRGYLAPEWITNNPISEKSDVYSY 679
R ++APE + + + +SDV+S+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSF 245
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 23/197 (11%)
Query: 497 KLGQGGFGSVYLGMLP-DGIQVAVKKLESIGQGKKEFSAEVTTIGNV---------HHLH 546
++G G +G+VY P G VA+K + G ++T+ V H +
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 547 LVKLKGFCIEG-----AHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKG 601
+V+L C L +E++ D + L T ++ +G
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHVDQ---DLRTYLDKAPPPGLPAETIKDLMRQFLRG 132
Query: 602 LAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
L +LH C IVH D+KPEN+L+ T K++DFGLA++ + + +L T + T Y A
Sbjct: 133 LDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL--TPVVVTLWYRA 187
Query: 662 PEWITNNPISEKSDVYS 678
PE + + + D++S
Sbjct: 188 PEVLLQSTYATPVDMWS 204
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 80/177 (45%), Gaps = 15/177 (8%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKL-ESIGQGKKEFSAEVT---TIGNVHHLHLVKLKG 552
LG+G FG V L G A+K L + + K E + VT + N H L LK
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK- 74
Query: 553 FCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ + RL EY G L F+ + E F RF A + L YLH
Sbjct: 75 YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGA-EIVSALEYLHSR--- 127
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNN 668
+V+ DIK EN++LD + K++DFGL K + T GT YLAPE + +N
Sbjct: 128 DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEVLEDN 183
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 19/191 (9%)
Query: 498 LGQGGFGSVYLG--MLPD--GIQVAVKKLESIGQG--KKEFSAEVTTIGNVHHLHLVKLK 551
+G+G FG V+ G M P+ + VA+K ++ +++F E T+ H H+VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF-LSWNTRFNIALGMAKGLAYLHEECE 610
G E ++ E G L ++ + +F L + A ++ LAYL +
Sbjct: 78 GVITENPVWIIM-ELCTLGELRSFL----QVRKFSLDLASLILYAYQLSTALAYLESK-- 130
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR--GYLAPEWITNN 668
+ VH DI NVL+ K+ DFGL++ M E+S Y +G ++APE I
Sbjct: 131 -RFVHRDIAARNVLVSATDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFR 187
Query: 669 PISEKSDVYSY 679
+ SDV+ +
Sbjct: 188 RFTSASDVWMF 198
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 93/214 (43%), Gaps = 46/214 (21%)
Query: 498 LGQGGFGSVYLGMLP-DGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIE 556
+G GGFG V+ DG +++ + ++ EV + + H+++V G C +
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRR---VKYNNEKAEREVKALAKLDHVNIVHYNG-CWD 75
Query: 557 G------------------------AHR------LLAYEYLGNGSLDKWIFNSTEESRFL 586
G + R + E+ G+L++WI E+ R
Sbjct: 76 GFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI----EKRRGE 131
Query: 587 SWNTRFNIAL--GMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR 644
+ + L + KG+ Y+H + K++H D+KP N+ L D K+ DFGL +
Sbjct: 132 KLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKN 188
Query: 645 EESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
+ T +GT Y++PE I++ ++ D+Y+
Sbjct: 189 DGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYA 220
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 81/184 (44%), Gaps = 15/184 (8%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKL-ESIGQGKKEFSAEVT---TIGNVHHLHLVKLKG 552
LG+G FG V L G A+K L + + K E + VT + N H L LK
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK- 71
Query: 553 FCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ + RL EY G L F+ + E F RF A + L YLH
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGA-EIVSALEYLHSR--- 124
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPIS 671
+V+ DIK EN++LD + K++DFGL K + T GT YLAPE + +N
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEVLEDNDYG 183
Query: 672 EKSD 675
D
Sbjct: 184 RAVD 187
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 30/225 (13%)
Query: 481 RFSYD----DLCKATKNFSTKLGQGGFGSVY------LGMLPDGIQVAVKKLESIGQGKK 530
R YD + + LG+G FG V + VAVK L+ G
Sbjct: 16 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKE-GATHS 74
Query: 531 EFSAEVTTIGNV----HHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE--- 582
E A ++ + + HHL++V L G C + G ++ E+ G+L ++ + E
Sbjct: 75 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 134
Query: 583 -------SRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSD 635
FL+ + +AKG+ +L K +H D+ N+LL + K+ D
Sbjct: 135 YKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICD 191
Query: 636 FGLAKLMNREESLVYT-TLRGTRGYLAPEWITNNPISEKSDVYSY 679
FGLA+ + ++ V R ++APE I + + +SDV+S+
Sbjct: 192 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 27/206 (13%)
Query: 498 LGQGGFGSVYL----GMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNV-HHLH 546
LG+G FG V L G+ D +VAVK L+S K + +E+ + + H +
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWI-----------FN-STEESRFLSWNTRFNI 594
++ L G C + + EY G+L +++ +N S LS +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 595 ALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-L 653
A +A+G+ YL + K +H D+ NVL+ ++ K++DFGLA+ ++ + TT
Sbjct: 141 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 654 RGTRGYLAPEWITNNPISEKSDVYSY 679
R ++APE + + + +SDV+S+
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSF 223
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 27/206 (13%)
Query: 498 LGQGGFGSVYL----GMLPDG----IQVAVKKLESIGQGKK--EFSAEVTTIGNV-HHLH 546
LG+G FG V L G+ D +VAVK L+S K + +E+ + + H +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWI-----------FN-STEESRFLSWNTRFNI 594
++ L G C + + EY G+L +++ +N S LS +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 595 ALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT-L 653
A +A+G+ YL + K +H D+ NVL+ ++ K++DFGLA+ ++ + TT
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 654 RGTRGYLAPEWITNNPISEKSDVYSY 679
R ++APE + + + +SDV+S+
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSF 238
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 10/144 (6%)
Query: 523 ESIGQGKKEFSAEVTTIGNVH-HLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTE 581
E + + ++ EV + V H ++++LK L ++ + G L F+
Sbjct: 61 EEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL----FDYLT 116
Query: 582 ESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKL 641
E LS I + + + LH+ + IVH D+KPEN+LLDD+ K++DFG +
Sbjct: 117 EKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQ 173
Query: 642 MNREESLVYTTLRGTRGYLAPEWI 665
++ E L + GT YLAPE I
Sbjct: 174 LDPGEKL--REVCGTPSYLAPEII 195
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 88/194 (45%), Gaps = 23/194 (11%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVT 537
P SY D + +G G FG VY L D G VA+KK + QGK + E+
Sbjct: 17 PQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAIKK---VLQGKAFKNRELQ 65
Query: 538 TIGNVHHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIA 595
+ + H ++V+L+ F G + Y L + + ++ SR +
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 125
Query: 596 LGMA---KGLAYLHEECEVKIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNREESLVYT 651
L M + LAY+H I H DIKP+N+LLD D K+ DFG AK + R E V
Sbjct: 126 LYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-- 180
Query: 652 TLRGTRGYLAPEWI 665
+ +R Y APE I
Sbjct: 181 SYICSRYYRAPELI 194
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 88/194 (45%), Gaps = 23/194 (11%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVT 537
P SY D + +G G FG VY L D G VA+KK + QGK + E+
Sbjct: 17 PQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAIKK---VLQGKAFKNRELQ 65
Query: 538 TIGNVHHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIA 595
+ + H ++V+L+ F G + Y L + + ++ SR +
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 125
Query: 596 LGMA---KGLAYLHEECEVKIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNREESLVYT 651
L M + LAY+H I H DIKP+N+LLD D K+ DFG AK + R E V
Sbjct: 126 LYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-- 180
Query: 652 TLRGTRGYLAPEWI 665
+ +R Y APE I
Sbjct: 181 SYICSRYYRAPELI 194
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
G ++E EV+ + V H +++ L +L E + G L F+ +
Sbjct: 56 GVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGEL----FDFLAQKES 111
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENV-LLDDNFT---AKVSDFGLAKL 641
LS + + G+ YLH + KI H D+KPEN+ LLD N K+ DFGLA
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168
Query: 642 MNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
+ E+ + + + GT ++APE + P+ ++D++S
Sbjct: 169 I--EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 203
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 86/196 (43%), Gaps = 27/196 (13%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVT 537
P SY D + +G G FG VY L D G VA+KK + QGK + E+
Sbjct: 17 PQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAIKK---VLQGKAFKNRELQ 65
Query: 538 TIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTR----FN 593
+ + H ++V+L+ F + E N LD +R S +
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEK--KDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIY 123
Query: 594 IALGMA---KGLAYLHEECEVKIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNREESLV 649
+ L M + LAY+H I H DIKP+N+LLD D K+ DFG AK + R E V
Sbjct: 124 VKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV 180
Query: 650 YTTLRGTRGYLAPEWI 665
+R Y APE I
Sbjct: 181 SXIC--SRYYRAPELI 194
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 103/235 (43%), Gaps = 30/235 (12%)
Query: 455 RKRLTKFSQEDLEEDNFLEKISGMPTRFSY-DDLCKATKNFSTKLGQGGFGSVY-LGMLP 512
R R ED E EK+ P + Y +++ AT +LG+G FG V+ +
Sbjct: 42 RSREPSPKTEDNEGVLLTEKLK--PVDYEYREEVHWATHQL--RLGRGSFGEVHRMEDKQ 97
Query: 513 DGIQVAVKKLESIGQGKKEFSAE-VTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGS 571
G Q AVKK+ + F AE + + +V L G EG + E L GS
Sbjct: 98 TGFQCAVKKVRL-----EVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGS 152
Query: 572 LDKWIFNS--TEESRFLSWNTRFNIALGMA-KGLAYLHEECEVKIVHCDIKPENVLL-DD 627
L + + E R L + LG A +GL YLH +I+H D+K +NVLL D
Sbjct: 153 LGQLVKEQGCLPEDRALYY-------LGQALEGLEYLHSR---RILHGDVKADNVLLSSD 202
Query: 628 NFTAKVSDFGLAKLMNRE----ESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
A + DFG A + + + L + GT ++APE + K DV+S
Sbjct: 203 GSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWS 257
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 14/189 (7%)
Query: 497 KLGQGGFGSV-YLGMLPDGIQVAVKKLESIGQGK--KEFSAEVTTIGNVHHL-HLVKLKG 552
++G+G +GSV + P G +AVK++ S K K+ ++ + ++V+ G
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 553 FCIEGAHRLLAYEYLGNGSLDK---WIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
+ E L + S DK ++++ ++ + I L K L +L E
Sbjct: 89 ALFREGDCWICME-LMSTSFDKFYKYVYSVLDD--VIPEEILGKITLATVKALNHLKEN- 144
Query: 610 EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+KI+H DIKP N+LLD + K+ DFG++ + +S+ T G R Y+APE I +
Sbjct: 145 -LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV--DSIAKTRDAGCRPYMAPERIDPSA 201
Query: 670 ISEKSDVYS 678
+ DV S
Sbjct: 202 SRQGYDVRS 210
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 86/192 (44%), Gaps = 25/192 (13%)
Query: 497 KLGQGGFGSVY-LGMLPDGIQVAVKKLESIGQGKKEFSAE-VTTIGNVHHLHLVKLKGFC 554
++G+G FG V+ + G Q AVKK+ + F E + + +V L G
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKVRL-----EVFRVEELVACAGLSSPRIVPLYGAV 119
Query: 555 IEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMA-KGLAYLHEECEV 611
EG + E L GSL + I E R L + LG A +GL YLH
Sbjct: 120 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY-------LGQALEGLEYLHTR--- 169
Query: 612 KIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNRE----ESLVYTTLRGTRGYLAPEWIT 666
+I+H D+K +NVLL D A + DFG A + + L + GT ++APE +
Sbjct: 170 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 229
Query: 667 NNPISEKSDVYS 678
P K D++S
Sbjct: 230 GKPCDAKVDIWS 241
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 29/207 (14%)
Query: 498 LGQGGFGSVYL----GMLPD----GIQVAVKKLESIGQGKK--EFSAEVTTIGNV-HHLH 546
LG+G FG V + G+ D + VAVK L+ K + +E+ + + H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWI-------------FNSTEESRFLSWNTRFN 593
++ L G C + + Y G+L +++ N E + +++ +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQ-MTFKDLVS 161
Query: 594 IALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT- 652
+A+G+ YL + K +H D+ NVL+ +N K++DFGLA+ +N + TT
Sbjct: 162 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 653 LRGTRGYLAPEWITNNPISEKSDVYSY 679
R ++APE + + + +SDV+S+
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSF 245
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 83/195 (42%), Gaps = 34/195 (17%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLE------------------SIGQGKKEFSAEVTTI 539
L QG F + L D A+KK E SI +F E+ I
Sbjct: 39 LNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQII 97
Query: 540 GNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSL---DKWIFNSTEE-SRFLSWNTRFNIA 595
++ + + + +G + YEY+ N S+ D++ F + + F+ I
Sbjct: 98 TDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCII 157
Query: 596 LGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRG 655
+ +Y+H E I H D+KP N+L+D N K+SDFG E +V ++G
Sbjct: 158 KSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFG------ESEYMVDKKIKG 209
Query: 656 TRG---YLAPEWITN 667
+RG ++ PE+ +N
Sbjct: 210 SRGTYEFMPPEFFSN 224
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 91/217 (41%), Gaps = 34/217 (15%)
Query: 493 NFSTKLGQGGFGSVY----LGMLPDG--IQVAVKKLESIGQG--KKEFSAEVTTIGNV-H 543
F LG G FG V G+ G IQVAVK L+ ++ +E+ + +
Sbjct: 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS 107
Query: 544 HLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWI-------------------FNSTEESR 584
H ++V L G C L +EY G L ++ E+
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 585 FLSWNTRFNIALGMAKGLAYLH-EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAK-LM 642
L++ A +AKG+ +L + C VH D+ NVL+ K+ DFGLA+ +M
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 643 NREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYSY 679
+ +V R ++APE + + KSDV+SY
Sbjct: 224 SDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSY 260
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 23/194 (11%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVT 537
P SY D + +G G FG VY L D G VA+KK + Q K+ + E+
Sbjct: 17 PQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQ 65
Query: 538 TIGNVHHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIA 595
+ + H ++V+L+ F G + Y L + + ++ SR +
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 125
Query: 596 LGMA---KGLAYLHEECEVKIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNREESLVYT 651
L M + LAY+H I H DIKP+N+LLD D K+ DFG AK + R E V
Sbjct: 126 LYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX 182
Query: 652 TLRGTRGYLAPEWI 665
+R Y APE I
Sbjct: 183 IC--SRYYRAPELI 194
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 86/192 (44%), Gaps = 25/192 (13%)
Query: 497 KLGQGGFGSVY-LGMLPDGIQVAVKKLESIGQGKKEFSAE-VTTIGNVHHLHLVKLKGFC 554
++G+G FG V+ + G Q AVKK+ + F E + + +V L G
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKVRL-----EVFRVEELVACAGLSSPRIVPLYGAV 135
Query: 555 IEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALGMA-KGLAYLHEECEV 611
EG + E L GSL + I E R L + LG A +GL YLH
Sbjct: 136 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY-------LGQALEGLEYLHTR--- 185
Query: 612 KIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNRE----ESLVYTTLRGTRGYLAPEWIT 666
+I+H D+K +NVLL D A + DFG A + + L + GT ++APE +
Sbjct: 186 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 245
Query: 667 NNPISEKSDVYS 678
P K D++S
Sbjct: 246 GKPCDAKVDIWS 257
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 23/194 (11%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVT 537
P SY D + +G G FG VY L D G VA+KK + Q K+ + E+
Sbjct: 18 PQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQ 66
Query: 538 TIGNVHHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIA 595
+ + H ++V+L+ F G + Y L + + ++ SR +
Sbjct: 67 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 126
Query: 596 LGMA---KGLAYLHEECEVKIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNREESLVYT 651
L M + LAY+H I H DIKP+N+LLD D K+ DFG AK + R E V
Sbjct: 127 LYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX 183
Query: 652 TLRGTRGYLAPEWI 665
+R Y APE I
Sbjct: 184 IC--SRYYRAPELI 195
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 23/194 (11%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVT 537
P SY D + +G G FG VY L D G VA+KK + Q K+ + E+
Sbjct: 17 PQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQ 65
Query: 538 TIGNVHHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIA 595
+ + H ++V+L+ F G + Y L + + ++ SR +
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 125
Query: 596 LGMA---KGLAYLHEECEVKIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNREESLVYT 651
L M + LAY+H I H DIKP+N+LLD D K+ DFG AK + R E V
Sbjct: 126 LYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX 182
Query: 652 TLRGTRGYLAPEWI 665
+R Y APE I
Sbjct: 183 IC--SRYYRAPELI 194
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 23/194 (11%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVT 537
P SY D + +G G FG VY L D G VA+KK + Q K+ + E+
Sbjct: 36 PQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQ 84
Query: 538 TIGNVHHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIA 595
+ + H ++V+L+ F G + Y L + + ++ SR +
Sbjct: 85 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 144
Query: 596 LGMA---KGLAYLHEECEVKIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNREESLVYT 651
L M + LAY+H I H DIKP+N+LLD D K+ DFG AK + R E V
Sbjct: 145 LYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX 201
Query: 652 TLRGTRGYLAPEWI 665
+R Y APE I
Sbjct: 202 IC--SRYYRAPELI 213
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
+ L YL + +I+H D+KP+N+LLD++ ++DF +A ++ RE + TT+ GT+
Sbjct: 124 LVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI--TTMAGTK 178
Query: 658 GYLAPE 663
Y+APE
Sbjct: 179 PYMAPE 184
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 23/194 (11%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVT 537
P SY D + +G G FG VY L D G VA+KK + Q K+ + E+
Sbjct: 25 PQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQ 73
Query: 538 TIGNVHHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIA 595
+ + H ++V+L+ F G + Y L + + ++ SR +
Sbjct: 74 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 133
Query: 596 LGMA---KGLAYLHEECEVKIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNREESLVYT 651
L M + LAY+H I H DIKP+N+LLD D K+ DFG AK + R E V
Sbjct: 134 LYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX 190
Query: 652 TLRGTRGYLAPEWI 665
+R Y APE I
Sbjct: 191 IC--SRYYRAPELI 202
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 23/194 (11%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVT 537
P SY D + +G G FG VY L D G VA+KK + Q K+ + E+
Sbjct: 29 PQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQ 77
Query: 538 TIGNVHHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIA 595
+ + H ++V+L+ F G + Y L + + ++ SR +
Sbjct: 78 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 137
Query: 596 LGMA---KGLAYLHEECEVKIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNREESLVYT 651
L M + LAY+H I H DIKP+N+LLD D K+ DFG AK + R E V
Sbjct: 138 LYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX 194
Query: 652 TLRGTRGYLAPEWI 665
+R Y APE I
Sbjct: 195 IC--SRYYRAPELI 206
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 88/194 (45%), Gaps = 23/194 (11%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVT 537
P SY D + +G G FG VY L D G VA+KK + Q K+ + E+
Sbjct: 17 PQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQ 65
Query: 538 TIGNVHHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIA 595
+ + H ++V+L+ F G + Y L + + ++ SR +
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 125
Query: 596 LGMA---KGLAYLHEECEVKIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNREESLVYT 651
L M + LAY+H I H DIKP+N+LLD D K+ DFG AK + R E V
Sbjct: 126 LYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-- 180
Query: 652 TLRGTRGYLAPEWI 665
+ +R Y APE I
Sbjct: 181 SYICSRYYRAPELI 194
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 23/194 (11%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVT 537
P SY D + +G G FG VY L D G VA+KK + Q K+ + E+
Sbjct: 21 PQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQ 69
Query: 538 TIGNVHHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIA 595
+ + H ++V+L+ F G + Y L + + ++ SR +
Sbjct: 70 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 129
Query: 596 LGMA---KGLAYLHEECEVKIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNREESLVYT 651
L M + LAY+H I H DIKP+N+LLD D K+ DFG AK + R E V
Sbjct: 130 LYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX 186
Query: 652 TLRGTRGYLAPEWI 665
+R Y APE I
Sbjct: 187 IC--SRYYRAPELI 198
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 30/226 (13%)
Query: 481 RFSYD----DLCKATKNFSTKLGQGGFGSVY------LGMLPDGIQVAVKKLE--SIGQG 528
R YD + + LG+G FG V + VAVK L+ +
Sbjct: 14 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 73
Query: 529 KKEFSAEVTTIGNV-HHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE---- 582
+ +E+ + ++ HHL++V L G C + G ++ E+ G+L ++ + E
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 583 --------SRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVS 634
FL+ + +AKG+ +L K +H D+ N+LL + K+
Sbjct: 134 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKIC 190
Query: 635 DFGLAKLMNREESLVYT-TLRGTRGYLAPEWITNNPISEKSDVYSY 679
DFGLA+ + ++ V R ++APE I + + +SDV+S+
Sbjct: 191 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 496 TKLGQGGFGSVYLGMLP-DGIQVAVKKLESIGQGKKEFSAEVTTIGNV---------HHL 545
++G G +G+VY P G VA+K S+ E ++T+ V H
Sbjct: 10 AEIGVGAYGTVYKARDPHSGHFVALK---SVRVPNGEEGLPISTVREVALLRRLEAFEHP 66
Query: 546 HLVKLKGFCIEG-----AHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAK 600
++V+L C L +E++ D + L T ++ +
Sbjct: 67 NVVRLMDVCATSRTDREIKVTLVFEHVDQ---DLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 601 GLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYL 660
GL +LH C IVH D+KPEN+L+ T K++DFGLA++ + + +L + T Y
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV--TLWYR 178
Query: 661 APEWITNNPISEKSDVYS 678
APE + + + D++S
Sbjct: 179 APEVLLQSTYATPVDMWS 196
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 88/194 (45%), Gaps = 23/194 (11%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVT 537
P SY D + +G G FG VY L D G VA+KK + Q K+ + E+
Sbjct: 45 PQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQ 93
Query: 538 TIGNVHHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIA 595
+ + H ++V+L+ F G + Y L + + ++ SR +
Sbjct: 94 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 153
Query: 596 LGMA---KGLAYLHEECEVKIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNREESLVYT 651
L M + LAY+H I H DIKP+N+LLD D K+ DFG AK + R E V
Sbjct: 154 LYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-- 208
Query: 652 TLRGTRGYLAPEWI 665
+ +R Y APE I
Sbjct: 209 SYICSRYYRAPELI 222
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 23/194 (11%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVT 537
P SY D + +G G FG VY L D G VA+KK + Q K+ + E+
Sbjct: 51 PQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQ 99
Query: 538 TIGNVHHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIA 595
+ + H ++V+L+ F G + Y L + + ++ SR +
Sbjct: 100 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 159
Query: 596 LGMA---KGLAYLHEECEVKIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNREESLVYT 651
L M + LAY+H I H DIKP+N+LLD D K+ DFG AK + R E V
Sbjct: 160 LYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX 216
Query: 652 TLRGTRGYLAPEWI 665
+R Y APE I
Sbjct: 217 IC--SRYYRAPELI 228
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 88/194 (45%), Gaps = 23/194 (11%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVT 537
P SY D + +G G FG VY L D G VA+KK + Q K+ + E+
Sbjct: 30 PQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQ 78
Query: 538 TIGNVHHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIA 595
+ + H ++V+L+ F G + Y L + + ++ SR +
Sbjct: 79 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 138
Query: 596 LGMA---KGLAYLHEECEVKIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNREESLVYT 651
L M + LAY+H I H DIKP+N+LLD D K+ DFG AK + R E V
Sbjct: 139 LYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-- 193
Query: 652 TLRGTRGYLAPEWI 665
+ +R Y APE I
Sbjct: 194 SYICSRYYRAPELI 207
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 23/194 (11%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVT 537
P SY D + +G G FG VY L D G VA+KK + Q K+ + E+
Sbjct: 29 PQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQ 77
Query: 538 TIGNVHHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIA 595
+ + H ++V+L+ F G + Y L + + ++ SR +
Sbjct: 78 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 137
Query: 596 LGMA---KGLAYLHEECEVKIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNREESLVYT 651
L M + LAY+H I H DIKP+N+LLD D K+ DFG AK + R E V
Sbjct: 138 LYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX 194
Query: 652 TLRGTRGYLAPEWI 665
+R Y APE I
Sbjct: 195 IC--SRYYRAPELI 206
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
G ++E EV + + H +++ L +L E + G L F+ E
Sbjct: 70 GVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGEL----FDFLAEKES 125
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDD----NFTAKVSDFGLAKL 641
L+ + + G+ YLH + +I H D+KPEN++L D N K+ DFG+A
Sbjct: 126 LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 182
Query: 642 MNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
+ E + + GT ++APE + P+ ++D++S
Sbjct: 183 I--EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 217
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 102/235 (43%), Gaps = 30/235 (12%)
Query: 455 RKRLTKFSQEDLEEDNFLEKISGMPTRFSY-DDLCKATKNFSTKLGQGGFGSVY-LGMLP 512
R R ED E EK+ P + Y +++ AT +LG+G FG V+ +
Sbjct: 61 RSREPSPKTEDNEGVLLTEKLK--PVDYEYREEVHWATHQL--RLGRGSFGEVHRMEDKQ 116
Query: 513 DGIQVAVKKLESIGQGKKEFSAE-VTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGS 571
G Q AVKK+ + F AE + + +V L G EG + E L GS
Sbjct: 117 TGFQCAVKKVR-----LEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGS 171
Query: 572 LDKWIFNS--TEESRFLSWNTRFNIALGMA-KGLAYLHEECEVKIVHCDIKPENVLL-DD 627
L + + E R L + LG A +GL YLH +I+H D+K +NVLL D
Sbjct: 172 LGQLVKEQGCLPEDRALYY-------LGQALEGLEYLHSR---RILHGDVKADNVLLSSD 221
Query: 628 NFTAKVSDFGLAKLMNRE----ESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
A + DFG A + + L + GT ++APE + K DV+S
Sbjct: 222 GSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWS 276
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 30/226 (13%)
Query: 481 RFSYD----DLCKATKNFSTKLGQGGFGSVY------LGMLPDGIQVAVKKLE--SIGQG 528
R YD + + LG+G FG V + VAVK L+ +
Sbjct: 5 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 64
Query: 529 KKEFSAEVTTIGNV-HHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE---- 582
+ +E+ + ++ HHL++V L G C + G ++ E+ G+L ++ + E
Sbjct: 65 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 124
Query: 583 --------SRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVS 634
FL+ + +AKG+ +L K +H D+ N+LL + K+
Sbjct: 125 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKIC 181
Query: 635 DFGLAKLMNREESLVYT-TLRGTRGYLAPEWITNNPISEKSDVYSY 679
DFGLA+ + ++ V R ++APE I + + +SDV+S+
Sbjct: 182 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 88/194 (45%), Gaps = 23/194 (11%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVT 537
P SY D + +G G FG VY L D G VA+KK + Q K+ + E+
Sbjct: 22 PQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQ 70
Query: 538 TIGNVHHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIA 595
+ + H ++V+L+ F G + Y L + + ++ SR +
Sbjct: 71 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 130
Query: 596 LGMA---KGLAYLHEECEVKIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNREESLVYT 651
L M + LAY+H I H DIKP+N+LLD D K+ DFG AK + R E V
Sbjct: 131 LYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-- 185
Query: 652 TLRGTRGYLAPEWI 665
+ +R Y APE I
Sbjct: 186 SYICSRYYRAPELI 199
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
G ++E EV + + H +++ L +L E + G L F+ E
Sbjct: 56 GVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGEL----FDFLAEKES 111
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDD----NFTAKVSDFGLAKL 641
L+ + + G+ YLH + +I H D+KPEN++L D N K+ DFG+A
Sbjct: 112 LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 168
Query: 642 MNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
+ E + + GT ++APE + P+ ++D++S
Sbjct: 169 I--EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 203
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 496 TKLGQGGFGSVYLGMLP-DGIQVAVKKLESIGQGKKEFSAEVTTIGNV---------HHL 545
++G G +G+VY P G VA+K S+ E ++T+ V H
Sbjct: 10 AEIGVGAYGTVYKARDPHSGHFVALK---SVRVPNGEEGLPISTVREVALLRRLEAFEHP 66
Query: 546 HLVKLKGFCIEG-----AHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAK 600
++V+L C L +E++ D + L T ++ +
Sbjct: 67 NVVRLMDVCATSRTDREIKVTLVFEHVDQ---DLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 601 GLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYL 660
GL +LH C IVH D+KPEN+L+ T K++DFGLA++ + + +L + T Y
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV--TLWYR 178
Query: 661 APEWITNNPISEKSDVYS 678
APE + + + D++S
Sbjct: 179 APEVLLQSTYATPVDMWS 196
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 79/177 (44%), Gaps = 15/177 (8%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKL-ESIGQGKKEFSAEVT---TIGNVHHLHLVKLKG 552
LG+G FG V L G A+K L + + K E + VT + N H L LK
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK- 71
Query: 553 FCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ + RL EY G L F+ + E F RF A + L YLH
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGA-EIVSALEYLHSR--- 124
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNN 668
+V+ DIK EN++LD + K++DFGL K + GT YLAPE + +N
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDN 180
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 79/177 (44%), Gaps = 15/177 (8%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKL-ESIGQGKKEFSAEVT---TIGNVHHLHLVKLKG 552
LG+G FG V L G A+K L + + K E + VT + N H L LK
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK- 71
Query: 553 FCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ + RL EY G L F+ + E F RF A + L YLH
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGA-EIVSALEYLHSR--- 124
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNN 668
+V+ DIK EN++LD + K++DFGL K + GT YLAPE + +N
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDN 180
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
G ++E EV + + H +++ L +L E + G L F+ E
Sbjct: 49 GVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGEL----FDFLAEKES 104
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDD----NFTAKVSDFGLAKL 641
L+ + + G+ YLH + +I H D+KPEN++L D N K+ DFG+A
Sbjct: 105 LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161
Query: 642 MNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
+ E + + GT ++APE + P+ ++D++S
Sbjct: 162 I--EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 196
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 11/174 (6%)
Query: 499 GQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGA 558
+G FG V+ L + VAVK + + E+ + + H +L++ G+
Sbjct: 24 ARGRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGS 82
Query: 559 HRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC--------E 610
+ L +L DK + ++WN ++A M++GL+YLHE+ +
Sbjct: 83 N-LEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHK 141
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLR-GTRGYLAPE 663
I H D K +NVLL + TA ++DFGLA + T + GTR Y+APE
Sbjct: 142 PSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE 195
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 83/175 (47%), Gaps = 15/175 (8%)
Query: 498 LGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIE 556
+G G FG VY L D G VA+KK + Q K+ + E+ + + H ++V+L+ F
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 118
Query: 557 -GAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMA---KGLAYLHEECEV 611
G + Y L + + ++ SR + L M + LAY+H
Sbjct: 119 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---F 175
Query: 612 KIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
I H DIKP+N+LLD D K+ DFG AK + R E V + +R Y APE I
Sbjct: 176 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELI 228
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVA----VKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
LG+GGFG V+ M G A KK +G + E + VH +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 553 FCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ E L L + G + I+N E++ + GL +LH+
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR--- 308
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
I++ D+KPENVLLDD+ ++SD GLA + ++ GT G++APE +
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGTPGFMAPELL 361
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLES----------IGQGKKEFSAEVTTIGNVHHLHL 547
LG+GGFG V+ + A KL + +G + E + VH +
Sbjct: 193 LGRGGFGEVFACQMK-----ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFI 247
Query: 548 VKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
V L + E L L + G + I+N E++ + GL +LH
Sbjct: 248 VSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+ I++ D+KPENVLLDD+ ++SD GLA + ++ GT G++APE +
Sbjct: 307 QR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGTPGFMAPELL 361
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLES----------IGQGKKEFSAEVTTIGNVHHLHL 547
LG+GGFG V+ + A KL + +G + E + VH +
Sbjct: 193 LGRGGFGEVFACQMK-----ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFI 247
Query: 548 VKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
V L + E L L + G + I+N E++ + GL +LH
Sbjct: 248 VSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+ I++ D+KPENVLLDD+ ++SD GLA + ++ GT G++APE +
Sbjct: 307 QR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGTPGFMAPELL 361
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 30/226 (13%)
Query: 481 RFSYD----DLCKATKNFSTKLGQGGFGSVY------LGMLPDGIQVAVKKLE--SIGQG 528
R YD + + LG+G FG V + VAVK L+ +
Sbjct: 5 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 64
Query: 529 KKEFSAEVTTIGNV-HHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE---- 582
+ +E+ + ++ HHL++V L G C + G ++ E+ G+L ++ + E
Sbjct: 65 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPY 124
Query: 583 --------SRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVS 634
FL+ + +AKG+ +L K +H D+ N+LL + K+
Sbjct: 125 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKIC 181
Query: 635 DFGLAKLMNREESLVYT-TLRGTRGYLAPEWITNNPISEKSDVYSY 679
DFGLA+ + ++ V R ++APE I + + +SDV+S+
Sbjct: 182 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 83/175 (47%), Gaps = 15/175 (8%)
Query: 498 LGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIE 556
+G G FG VY L D G VA+KK + Q K+ + E+ + + H ++V+L+ F
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 122
Query: 557 -GAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMA---KGLAYLHEECEV 611
G + Y L + + ++ SR + L M + LAY+H
Sbjct: 123 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---F 179
Query: 612 KIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
I H DIKP+N+LLD D K+ DFG AK + R E V + +R Y APE I
Sbjct: 180 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELI 232
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 83/175 (47%), Gaps = 15/175 (8%)
Query: 498 LGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIE 556
+G G FG VY L D G VA+KK + Q K+ + E+ + + H ++V+L+ F
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 120
Query: 557 -GAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMA---KGLAYLHEECEV 611
G + Y L + + ++ SR + L M + LAY+H
Sbjct: 121 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---F 177
Query: 612 KIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
I H DIKP+N+LLD D K+ DFG AK + R E V + +R Y APE I
Sbjct: 178 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELI 230
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 498 LGQGGFGSVYLGMLPD-----GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
LG+GGFG V+ + + KK +G + E + VH +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 553 FCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ E L L + G + I+N E++ + GL +LH+
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR--- 308
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
I++ D+KPENVLLDD+ ++SD GLA + ++ GT G++APE +
Sbjct: 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGTPGFMAPELL 361
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 30/226 (13%)
Query: 481 RFSYD----DLCKATKNFSTKLGQGGFGSVY------LGMLPDGIQVAVKKLE--SIGQG 528
R YD + + LG+G FG V + VAVK L+ +
Sbjct: 14 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 73
Query: 529 KKEFSAEVTTIGNV-HHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE---- 582
+ +E+ + ++ HHL++V L G C + G ++ E+ G+L ++ + E
Sbjct: 74 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 583 --------SRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVS 634
FL+ + +AKG+ +L K +H D+ N+LL + K+
Sbjct: 134 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKIC 190
Query: 635 DFGLAKLMNREESLVYT-TLRGTRGYLAPEWITNNPISEKSDVYSY 679
DFGLA+ + ++ V R ++APE I + + +SDV+S+
Sbjct: 191 DFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 79/177 (44%), Gaps = 15/177 (8%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKL-ESIGQGKKEFSAEVT---TIGNVHHLHLVKLKG 552
LG+G FG V L G A+K L + + K E + VT + N H L LK
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK- 71
Query: 553 FCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ + RL EY G L F+ + E F RF A + L YLH
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGA-EIVSALEYLHSR--- 124
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNN 668
+V+ DIK EN++LD + K++DFGL K + GT YLAPE + +N
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDN 180
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 79/177 (44%), Gaps = 15/177 (8%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKL-ESIGQGKKEFSAEVT---TIGNVHHLHLVKLKG 552
LG+G FG V L G A+K L + + K E + VT + N H L LK
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK- 76
Query: 553 FCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ + RL EY G L F+ + E F RF A + L YLH
Sbjct: 77 YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGA-EIVSALEYLHSR--- 129
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNN 668
+V+ DIK EN++LD + K++DFGL K + GT YLAPE + +N
Sbjct: 130 DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLEDN 185
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIE 556
LGQG FG V D A+KK+ + +EV + +++H ++V+ +E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 557 -------------GAHRLLAYEYLGNGSLDKWIFNST-EESRFLSWNTRFNIALGMAKGL 602
+ + EY NG+L I + + R W I + L
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL----EAL 129
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLV------------- 649
+Y+H + I+H D+KP N+ +D++ K+ DFGLAK ++R ++
Sbjct: 130 SYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 650 YTTLRGTRGYLAPEWIT-NNPISEKSDVYS 678
T+ GT Y+A E + +EK D+YS
Sbjct: 187 LTSAIGTAMYVATEVLDGTGHYNEKIDMYS 216
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 33/224 (14%)
Query: 451 HHNKRKRLTKFSQEDLEEDNFLEKISGMPTRFSYDDLCKATKNFSTKLGQGGFGSVYLGM 510
HH+ ++R T + QE + I +P R+ +N S +G G +GSV
Sbjct: 5 HHHSQERPTFYRQE------LNKTIWEVPERY---------QNLSP-VGSGAYGSVCAAF 48
Query: 511 -LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYE 565
G++VAVKKL +SI K+ + E+ + ++ H +++ L A L +
Sbjct: 49 DTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEFN 106
Query: 566 --YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENV 623
YL + + N + + + +F I + +GL Y+H I+H D+KP N+
Sbjct: 107 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS---ADIIHRDLKPSNL 162
Query: 624 LLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 163 AVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 202
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 26/238 (10%)
Query: 465 DLEEDNFLEKISGMPTRFSYDDLCKATKNFSTKLGQGGFGSVY------LGMLPDGIQVA 518
D +E E +P S + + LG+G FG V + VA
Sbjct: 2 DPDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVA 61
Query: 519 VKKLE--SIGQGKKEFSAEVTTIGNV-HHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDK 574
VK L+ + + +E+ + ++ HHL++V L G C + G ++ E+ G+L
Sbjct: 62 VKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST 121
Query: 575 WIFNSTEE------------SRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPEN 622
++ + E FL+ + +AKG+ +L K +H D+ N
Sbjct: 122 YLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARN 178
Query: 623 VLLDDNFTAKVSDFGLAKLMNREESLVYT-TLRGTRGYLAPEWITNNPISEKSDVYSY 679
+LL + K+ DFGLA+ + ++ V R ++APE I + + +SDV+S+
Sbjct: 179 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 25/223 (11%)
Query: 465 DLEEDNFLEKISGMPTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPDGIQ------VA 518
DL +N + TRF+ D +LG+G F V + Q +
Sbjct: 12 DLGTENLYFQXMATCTRFTDD------YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIIN 65
Query: 519 VKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFN 578
KKL + K E A + + + H ++V+L E L ++ + G L F
Sbjct: 66 TKKLSARDHQKLEREARICRL--LKHPNIVRLHDSISEEGFHYLVFDLVTGGEL----FE 119
Query: 579 STEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDN---FTAKVSD 635
+ S + + + + ++H+ IVH D+KPEN+LL K++D
Sbjct: 120 DIVAREYYSEADASHCIHQILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLAD 176
Query: 636 FGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
FGLA + E+ + GT GYL+PE + +P + D+++
Sbjct: 177 FGLAIEVQGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDIWA 218
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 27/197 (13%)
Query: 495 STKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGF 553
S +LG+G F V + G + A K L+ +G+ + AE+ +H + +++L
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ-DCRAEI-----LHEIAVLELAKS 87
Query: 554 C--IEGAHR--------LLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLA 603
C + H +L EY G + E + +S N + + +G+
Sbjct: 88 CPRVINLHEVYENTSEIILILEYAAGGEIFSLCL--PELAEMVSENDVIRLIKQILEGVY 145
Query: 604 YLHEECEVKIVHCDIKPENVLLDDNFT---AKVSDFGLAKLMNREESLVYTTLRGTRGYL 660
YLH+ IVH D+KP+N+LL + K+ DFG+++ + L + GT YL
Sbjct: 146 YLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL--REIMGTPEYL 200
Query: 661 APEWITNNPISEKSDVY 677
APE + +PI+ +D++
Sbjct: 201 APEILNYDPITTATDMW 217
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 30/226 (13%)
Query: 481 RFSYD----DLCKATKNFSTKLGQGGFGSVY------LGMLPDGIQVAVKKLE--SIGQG 528
R YD + + LG+G FG V + VAVK L+ +
Sbjct: 5 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 64
Query: 529 KKEFSAEVTTIGNV-HHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE---- 582
+ +E+ + ++ HHL++V L G C + G ++ E+ G+L ++ + E
Sbjct: 65 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPY 124
Query: 583 --------SRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVS 634
FL+ + +AKG+ +L K +H D+ N+LL + K+
Sbjct: 125 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKIC 181
Query: 635 DFGLAKLMNREESLVYT-TLRGTRGYLAPEWITNNPISEKSDVYSY 679
DFGLA+ + ++ V R ++APE I + + +SDV+S+
Sbjct: 182 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 101/239 (42%), Gaps = 28/239 (11%)
Query: 465 DLEEDNFLEKISGMPTRFSYDDLCKATKNFSTKLGQGGFGSVY------LGMLPDGIQVA 518
D +E E +P S + + LG+G FG V + VA
Sbjct: 4 DPDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVA 63
Query: 519 VKKLESIGQGKKEFSAEVTTIGNV----HHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLD 573
VK L+ G E A ++ + + HHL++V L G C + G ++ E+ G+L
Sbjct: 64 VKMLKE-GATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 122
Query: 574 KWIFNSTEE------------SRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPE 621
++ + E FL+ + +AKG+ +L K +H D+
Sbjct: 123 TYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAAR 179
Query: 622 NVLLDDNFTAKVSDFGLAKLMNREESLVYT-TLRGTRGYLAPEWITNNPISEKSDVYSY 679
N+LL + K+ DFGLA+ + ++ V R ++APE I + + +SDV+S+
Sbjct: 180 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 238
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 21/194 (10%)
Query: 497 KLGQGGFGSVYL-GMLPDGIQVAVK-------KLESIGQGKKEFSAEVTTIGNVHHLHLV 548
+LG G F V G+Q A K K G +++ EV+ + + H +++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
L +L E + G L F+ E L+ + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGEL----FDFLAEKESLTEEEATEFLKQILNGVYYLHS- 132
Query: 609 CEVKIVHCDIKPENV-LLDDNFTA---KVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
++I H D+KPEN+ LLD N K+ DFGLA ++ + + GT ++APE
Sbjct: 133 --LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPAFVAPEI 188
Query: 665 ITNNPISEKSDVYS 678
+ P+ ++D++S
Sbjct: 189 VNYEPLGLEADMWS 202
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 88/194 (45%), Gaps = 23/194 (11%)
Query: 479 PTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVT 537
P SY D + +G G FG VY L D G VA+KK + Q K+ + E+
Sbjct: 96 PQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQ 144
Query: 538 TIGNVHHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIA 595
+ + H ++V+L+ F G + Y L + + ++ SR +
Sbjct: 145 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 204
Query: 596 LGMA---KGLAYLHEECEVKIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNREESLVYT 651
L M + LAY+H I H DIKP+N+LLD D K+ DFG AK + R E V
Sbjct: 205 LYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV-- 259
Query: 652 TLRGTRGYLAPEWI 665
+ +R Y APE I
Sbjct: 260 SYICSRYYRAPELI 273
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 481 RFSYD----DLCKATKNFSTKLGQGGFGSVY------LGMLPDGIQVAVKKLESIGQGKK 530
R YD + + LG+G FG V + VAVK L+ G
Sbjct: 51 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE-GATHS 109
Query: 531 EFSAEVTTIGNV----HHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE--- 582
E A ++ + + HHL++V L G C + G ++ E+ G+L ++ + E
Sbjct: 110 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 169
Query: 583 ---------SRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKV 633
FL+ + +AKG+ +L K +H D+ N+LL + K+
Sbjct: 170 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKI 226
Query: 634 SDFGLAKLMNREESLVYT-TLRGTRGYLAPEWITNNPISEKSDVYSY 679
DFGLA+ + ++ V R ++APE I + + +SDV+S+
Sbjct: 227 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 273
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 498 LGQGGFGSVYLGMLPDGIQ-VAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIE 556
+G G FG L + VAVK +E + + E+ ++ H ++V+ K +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 557 GAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHC 616
H + EY G L + I N+ RF RF + G++Y H +++ H
Sbjct: 87 PTHLAIVMEYASGGELFERICNA---GRFSEDEARFFFQ-QLISGVSYAHA---MQVAHR 139
Query: 617 DIKPENVLLDDNFTA--KVSDFGLAK---LMNREESLVYTTLRGTRGYLAPEWITNNPIS 671
D+K EN LLD + K++DFG +K L ++ +S V GT Y+APE +
Sbjct: 140 DLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAV-----GTPAYIAPEVLLKKEYD 194
Query: 672 EK-SDVYS 678
K +DV+S
Sbjct: 195 GKVADVWS 202
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 82/177 (46%), Gaps = 14/177 (7%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLE-SIGQGKKEFSAEVT---TIGNVHHLHLVKLKG 552
LG+G FG V L G A+K L+ + K E + +T + N H L LK
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK- 214
Query: 553 FCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ + RL EY G L F+ + E F RF A + L YLH E
Sbjct: 215 YSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGA-EIVSALDYLH--SEK 268
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNN 668
+V+ D+K EN++LD + K++DFGL K ++ T GT YLAPE + +N
Sbjct: 269 NVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYLAPEVLEDN 324
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQ--GKKEFSAEVTTIGNVHHLHLVKLKGFC 554
LG+GGFG V+ D A+K++ + +++ EV + + H +V+
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 555 IEG------------AHRLLAYEYLGNGSLDKWIFNS-TEESRFLSWNTRFNIALGMAKG 601
+E + + + +L W+ T E R + +I L +A+
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEER--ERSVCLHIFLQIAEA 130
Query: 602 LAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR--EESLVYTTLR----- 654
+ +LH + ++H D+KP N+ + KV DFGL M++ EE V T +
Sbjct: 131 VEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARH 187
Query: 655 ----GTRGYLAPEWITNNPISEKSDVYS 678
GT+ Y++PE I N S K D++S
Sbjct: 188 TGQVGTKLYMSPEQIHGNSYSHKVDIFS 215
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 82/177 (46%), Gaps = 14/177 (7%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLE-SIGQGKKEFSAEVT---TIGNVHHLHLVKLKG 552
LG+G FG V L G A+K L+ + K E + +T + N H L LK
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK- 217
Query: 553 FCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ + RL EY G L F+ + E F RF A + L YLH E
Sbjct: 218 YSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGA-EIVSALDYLH--SEK 271
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNN 668
+V+ D+K EN++LD + K++DFGL K ++ T GT YLAPE + +N
Sbjct: 272 NVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYLAPEVLEDN 327
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 16/179 (8%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKL-ESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCI 555
LG+G +G VY G L + +++A+K++ E + + E+ ++ H ++V+ G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 556 EGAHRLLAYEYLGNGSLDKWIFNS----TEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
E + E + GSL + + + + + + T+ + +GL YLH+
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QILEGLKYLHDN--- 141
Query: 612 KIVHCDIKPENVLLDD-NFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
+IVH DIK +NVL++ + K+SDFG +K + T GT Y+APE I P
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT-ETFTGTLQYMAPEIIDKGP 199
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 496 TKLGQGGFGSVYLGMLP-DGIQVAVKKLESIGQGKKEFSAEVTTIGNV---------HHL 545
++G G +G+VY P G VA+K S+ E ++T+ V H
Sbjct: 10 AEIGVGAYGTVYKARDPHSGHFVALK---SVRVPNGEEGLPISTVREVALLRRLEAFEHP 66
Query: 546 HLVKLKGFCIEG-----AHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAK 600
++V+L C L +E++ D + L T ++ +
Sbjct: 67 NVVRLMDVCATSRTDREIKVTLVFEHVDQ---DLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 601 GLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYL 660
GL +LH C IVH D+KPEN+L+ T K++DFGLA++ + + +L + T Y
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV--TLWYR 178
Query: 661 APEWITNNPISEKSDVYS 678
APE + + + D++S
Sbjct: 179 APEVLLQSTYATPVDMWS 196
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 94/190 (49%), Gaps = 18/190 (9%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKL-ESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCI 555
LG+G +G VY G L + +++A+K++ E + + E+ ++ H ++V+ G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 556 EGAHRLLAYEYLGNGSLDKWIFNS----TEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
E + E + GSL + + + + + + T+ + +GL YLH+
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QILEGLKYLHDN--- 127
Query: 612 KIVHCDIKPENVLLDD-NFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP- 669
+IVH DIK +NVL++ + K+SDFG +K + T GT Y+APE I P
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT-ETFTGTLQYMAPEIIDKGPR 186
Query: 670 -ISEKSDVYS 678
+ +D++S
Sbjct: 187 GYGKAADIWS 196
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 30/226 (13%)
Query: 481 RFSYD----DLCKATKNFSTKLGQGGFGSVY------LGMLPDGIQVAVKKLE--SIGQG 528
R YD + + LG+G FG V + VAVK L+ +
Sbjct: 5 RLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSE 64
Query: 529 KKEFSAEVTTIGNV-HHLHLVKLKGFCIE-GAHRLLAYEYLGNGSLDKWIFNSTEE---- 582
+ +E+ + ++ HHL++V L G C + G ++ E+ G+L ++ + E
Sbjct: 65 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPY 124
Query: 583 --------SRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVS 634
FL+ + +AKG+ +L K +H D+ N+LL + K+
Sbjct: 125 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKIC 181
Query: 635 DFGLAKLMNREESLVYT-TLRGTRGYLAPEWITNNPISEKSDVYSY 679
DFGLA+ + ++ V R ++APE I + + +SDV+S+
Sbjct: 182 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 107/209 (51%), Gaps = 23/209 (11%)
Query: 485 DDLCKATKNFS--TKLGQGGFGSVYLGM-LPDGIQ-VAVKKLE-SIGQGKKEFSA--EVT 537
D LC+A + + ++G+G +G V+ L +G + VA+K++ G+ S EV
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 538 TIGNVH---HLHLVKLKGFC-IEGAHR----LLAYEYLGNGSLDKWIFNSTEESRFLSWN 589
+ ++ H ++V+L C + R L +E++ + L ++ E +
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPG--VPTE 120
Query: 590 TRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLV 649
T ++ + +GL +LH ++VH D+KP+N+L+ + K++DFGLA++ + + +L
Sbjct: 121 TIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL- 176
Query: 650 YTTLRGTRGYLAPEWITNNPISEKSDVYS 678
T++ T Y APE + + + D++S
Sbjct: 177 -TSVVVTLWYRAPEVLLQSSYATPVDLWS 204
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 14/176 (7%)
Query: 498 LGQGGFGSVYLGMLPD-GIQVAVKK-LESIGQG--KKEFSAEVTTIGNVHHLHLVKLKGF 553
+G+G +G V D G VA+KK LES KK E+ + + H +LV L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 554 CIEGAHRLLAYEYLGNGSLDKW-IFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
C + L +E++ + LD +F + L + + G+ + H
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNG-----LDYQVVQKYLFQIINGIGFCHSH---N 144
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNN 668
I+H DIKPEN+L+ + K+ DFG A+ + VY TR Y APE + +
Sbjct: 145 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE-VYDDEVATRWYRAPELLVGD 199
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 107/209 (51%), Gaps = 23/209 (11%)
Query: 485 DDLCKATKNFS--TKLGQGGFGSVYLGM-LPDGIQ-VAVKKLE-SIGQGKKEFSA--EVT 537
D LC+A + + ++G+G +G V+ L +G + VA+K++ G+ S EV
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 538 TIGNVH---HLHLVKLKGFC-IEGAHR----LLAYEYLGNGSLDKWIFNSTEESRFLSWN 589
+ ++ H ++V+L C + R L +E++ + L ++ E +
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPG--VPTE 120
Query: 590 TRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLV 649
T ++ + +GL +LH ++VH D+KP+N+L+ + K++DFGLA++ + + +L
Sbjct: 121 TIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL- 176
Query: 650 YTTLRGTRGYLAPEWITNNPISEKSDVYS 678
T++ T Y APE + + + D++S
Sbjct: 177 -TSVVVTLWYRAPEVLLQSSYATPVDLWS 204
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 19/191 (9%)
Query: 497 KLGQGGFG------SVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+LG+G F V G + KKL + K E A + + + H ++V+L
Sbjct: 29 ELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRL--LKHPNIVRL 86
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
E H L ++ + G L F + S + + + + + H+
Sbjct: 87 HDSISEEGHHYLIFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEAVLHCHQ--- 139
Query: 611 VKIVHCDIKPENVLLDDNF---TAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
+ +VH D+KPEN+LL K++DFGLA + E+ + GT GYL+PE +
Sbjct: 140 MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ-AWFGFAGTPGYLSPEVLRK 198
Query: 668 NPISEKSDVYS 678
+P + D+++
Sbjct: 199 DPYGKPVDLWA 209
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 22/191 (11%)
Query: 498 LGQGGFGSVYLGMLPDGI-------QVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
LG+G FG V L D I +V K+ K+ EV + + H +++KL
Sbjct: 40 LGKGSFGEVIL--CKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 97
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
F + + L E G L F+ + S I + G+ Y+H+
Sbjct: 98 YEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGITYMHKN-- 151
Query: 611 VKIVHCDIKPENVLLD---DNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
KIVH D+KPEN+LL+ + ++ DFGL+ + E S GT Y+APE + +
Sbjct: 152 -KIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKIGTAYYIAPE-VLH 207
Query: 668 NPISEKSDVYS 678
EK DV+S
Sbjct: 208 GTYDEKCDVWS 218
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 22/193 (11%)
Query: 497 KLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKE-FSAEVTTIGNVHHLHLVKLKGFC 554
+LG G FG VY + G A K +E+ + + E + E+ + H ++VKL G
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 555 IEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIV 614
+ E+ G++D + E R L+ + M + L +LH + +I+
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIML---ELDRGLTEPQIQVVCRQMLEALNFLHSK---RII 139
Query: 615 HCDIKPENVLLDDNFTAKVSDFGLA----KLMNREESLVYTTLRGTRGYLAPEWIT---- 666
H D+K NVL+ +++DFG++ K + + +S + GT ++APE +
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-----GTPYWMAPEVVMCETM 194
Query: 667 -NNPISEKSDVYS 678
+ P K+D++S
Sbjct: 195 KDTPYDYKADIWS 207
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 107/209 (51%), Gaps = 23/209 (11%)
Query: 485 DDLCKATKNFS--TKLGQGGFGSVYLGM-LPDGIQ-VAVKKLE-SIGQGKKEFSA--EVT 537
D LC+A + + ++G+G +G V+ L +G + VA+K++ G+ S EV
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 538 TIGNVH---HLHLVKLKGFC-IEGAHR----LLAYEYLGNGSLDKWIFNSTEESRFLSWN 589
+ ++ H ++V+L C + R L +E++ + L ++ E +
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPG--VPTE 120
Query: 590 TRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLV 649
T ++ + +GL +LH ++VH D+KP+N+L+ + K++DFGLA++ + + +L
Sbjct: 121 TIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL- 176
Query: 650 YTTLRGTRGYLAPEWITNNPISEKSDVYS 678
T++ T Y APE + + + D++S
Sbjct: 177 -TSVVVTLWYRAPEVLLQSSYATPVDLWS 204
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 17/192 (8%)
Query: 497 KLGQGGFGSV-YLGMLPDGIQVAVKKLESI--GQGKKEFSAEV-TTIGNVHHLHLVKLKG 552
+LG+G +G V + +P G +AVK++ + Q +K ++ ++ V V G
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
+ E L + SLDK+ ++ + + + IA+ + K L +LH ++
Sbjct: 74 ALFREGDVWICME-LMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH--SKLS 130
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP--- 669
++H D+KP NVL++ K+ DFG++ + + + G + Y+APE I NP
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLV--DDVAKDIDAGCKPYMAPERI--NPELN 186
Query: 670 ---ISEKSDVYS 678
S KSD++S
Sbjct: 187 QKGYSVKSDIWS 198
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
G +++ EV+ + + H +++ L +L E + G L F+ E
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKES 110
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENV-LLDDNFTA---KVSDFGLAKL 641
L+ + G+ YLH ++I H D+KPEN+ LLD N K+ DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 642 MNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
++ + + GT ++APE + P+ ++D++S
Sbjct: 168 IDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 22/193 (11%)
Query: 497 KLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKE-FSAEVTTIGNVHHLHLVKLKGFC 554
+LG G FG VY + G A K +E+ + + E + E+ + H ++VKL G
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 555 IEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIV 614
+ E+ G++D + E R L+ + M + L +LH + +I+
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIML---ELDRGLTEPQIQVVCRQMLEALNFLHSK---RII 131
Query: 615 HCDIKPENVLLDDNFTAKVSDFGLA----KLMNREESLVYTTLRGTRGYLAPEWIT---- 666
H D+K NVL+ +++DFG++ K + + +S + GT ++APE +
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-----GTPYWMAPEVVMCETM 186
Query: 667 -NNPISEKSDVYS 678
+ P K+D++S
Sbjct: 187 KDTPYDYKADIWS 199
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
G +++ EV+ + + H +++ L +L E + G L F+ E
Sbjct: 54 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKES 109
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENV-LLDDNFTA---KVSDFGLAKL 641
L+ + G+ YLH ++I H D+KPEN+ LLD N K+ DFGLA
Sbjct: 110 LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 166
Query: 642 MNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
++ + + GT ++APE + P+ ++D++S
Sbjct: 167 IDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWS 201
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
G +++ EV+ + + H +++ L +L E + G L F+ E
Sbjct: 54 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKES 109
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENV-LLDDNFTA---KVSDFGLAKL 641
L+ + G+ YLH ++I H D+KPEN+ LLD N K+ DFGLA
Sbjct: 110 LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 166
Query: 642 MNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
++ + + GT ++APE + P+ ++D++S
Sbjct: 167 IDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWS 201
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
G +++ EV+ + + H +++ L +L E + G L F+ E
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKES 110
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENV-LLDDNFTA---KVSDFGLAKL 641
L+ + G+ YLH ++I H D+KPEN+ LLD N K+ DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 642 MNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
++ + + GT ++APE + P+ ++D++S
Sbjct: 168 IDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 601 GLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYL 660
GL LH E +IV+ D+KPEN+LLDD+ ++SD GLA ++ E GT GY+
Sbjct: 298 GLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYM 352
Query: 661 APEWITNN 668
APE + N
Sbjct: 353 APEVVKNE 360
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
G +++ EV+ + + H +++ L +L E + G L F+ E
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKES 110
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENV-LLDDNFTA---KVSDFGLAKL 641
L+ + G+ YLH ++I H D+KPEN+ LLD N K+ DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 642 MNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
++ + + GT ++APE + P+ ++D++S
Sbjct: 168 IDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
G +++ EV+ + + H +++ L +L E + G L F+ E
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKES 110
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENV-LLDDNFTA---KVSDFGLAKL 641
L+ + G+ YLH ++I H D+KPEN+ LLD N K+ DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 642 MNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
++ + + GT ++APE + P+ ++D++S
Sbjct: 168 IDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 601 GLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYL 660
GL LH E +IV+ D+KPEN+LLDD+ ++SD GLA ++ E GT GY+
Sbjct: 298 GLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYM 352
Query: 661 APEWITNN 668
APE + N
Sbjct: 353 APEVVKNE 360
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 79/148 (53%), Gaps = 12/148 (8%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSA---EVTTIGNVHHLHLVKLKGF 553
K+G+G +G VY G VA+K++ + + S E++ + +HH ++V L
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIAL-GMAKGLAYLHEECEVK 612
L +E++ +K + +E++ +++ I L + +G+A+ H+ +
Sbjct: 88 IHSERCLTLVFEFM-----EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---R 139
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAK 640
I+H D+KP+N+L++ + K++DFGLA+
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 19/191 (9%)
Query: 497 KLGQGGFG------SVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+LG+G F V G + + KKL + K E A + + + H ++V+L
Sbjct: 18 ELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRL--LKHPNIVRL 75
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
E H L ++ + G L F + S + + + + + H+
Sbjct: 76 HDSISEEGHHYLIFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEAVLHCHQ--- 128
Query: 611 VKIVHCDIKPENVLLDDNF---TAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
+ +VH ++KPEN+LL K++DFGLA + E+ + GT GYL+PE +
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ-AWFGFAGTPGYLSPEVLRK 187
Query: 668 NPISEKSDVYS 678
+P + D+++
Sbjct: 188 DPYGKPVDLWA 198
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
G +++ EV+ + + H +++ L +L E + G L F+ E
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKES 110
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENV-LLDDNFTA---KVSDFGLAKL 641
L+ + G+ YLH ++I H D+KPEN+ LLD N K+ DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 642 MNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
++ + + GT ++APE + P+ ++D++S
Sbjct: 168 IDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
G +++ EV+ + + H +++ L +L E + G L F+ E
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKES 110
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENV-LLDDNFTA---KVSDFGLAKL 641
L+ + G+ YLH ++I H D+KPEN+ LLD N K+ DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 642 MNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
++ + + GT ++APE + P+ ++D++S
Sbjct: 168 IDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
G +++ EV+ + + H +++ L +L E + G L F+ E
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKES 110
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENV-LLDDNFTA---KVSDFGLAKL 641
L+ + G+ YLH ++I H D+KPEN+ LLD N K+ DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 642 MNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
++ + + GT ++APE + P+ ++D++S
Sbjct: 168 IDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
G +++ EV+ + + H +++ L +L E + G L F+ E
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKES 110
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENV-LLDDNFTA---KVSDFGLAKL 641
L+ + G+ YLH ++I H D+KPEN+ LLD N K+ DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 642 MNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
++ + + GT ++APE + P+ ++D++S
Sbjct: 168 IDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI-YQILRGLKYIHS- 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 144 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 196
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 79/148 (53%), Gaps = 12/148 (8%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSA---EVTTIGNVHHLHLVKLKGF 553
K+G+G +G VY G VA+K++ + + S E++ + +HH ++V L
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIAL-GMAKGLAYLHEECEVK 612
L +E++ +K + +E++ +++ I L + +G+A+ H+ +
Sbjct: 88 IHSERCLTLVFEFM-----EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---R 139
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAK 640
I+H D+KP+N+L++ + K++DFGLA+
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 22/191 (11%)
Query: 498 LGQGGFGSVYLGMLPDGI-------QVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
LG+G FG V L D I +V K+ K+ EV + + H +++KL
Sbjct: 34 LGKGSFGEVIL--CKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 91
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
F + + L E G L F+ + S I + G+ Y+H+
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGITYMHKN-- 145
Query: 611 VKIVHCDIKPENVLLD---DNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
KIVH D+KPEN+LL+ + ++ DFGL+ + E S GT Y+APE + +
Sbjct: 146 -KIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKIGTAYYIAPE-VLH 201
Query: 668 NPISEKSDVYS 678
EK DV+S
Sbjct: 202 GTYDEKCDVWS 212
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
G +++ EV+ + + H +++ L +L E + G L F+ E
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKES 110
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENV-LLDDNFTA---KVSDFGLAKL 641
L+ + G+ YLH ++I H D+KPEN+ LLD N K+ DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 642 MNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
++ + + GT ++APE + P+ ++D++S
Sbjct: 168 IDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 14/190 (7%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLE------SIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+G+G F V + G Q AVK ++ S G ++ E + + H H+V+L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
+ +E++ L I + S + + + L Y H+
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN-- 149
Query: 611 VKIVHCDIKPENVLL---DDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KPENVLL +++ K+ DFG+A + E LV GT ++APE +
Sbjct: 150 -NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG-ESGLVAGGRVGTPHFMAPEVVKR 207
Query: 668 NPISEKSDVY 677
P + DV+
Sbjct: 208 EPYGKPVDVW 217
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 24/154 (15%)
Query: 497 KLGQGGFGSVYLGM--LPDGIQVAVKKLESIGQGKKEFSA--EVTTIGNVHHLHLVKLKG 552
KLG+G + +VY G L D + VA+K++ + +A EV+ + ++ H ++V L
Sbjct: 9 KLGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 553 FCIEGAHRLLAYEYLGNGSLDKW------IFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
L +EYL + L ++ I N FL + +GLAY H
Sbjct: 68 IIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFL---------FQLLRGLAYCH 117
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAK 640
+ K++H D+KP+N+L+++ K++DFGLA+
Sbjct: 118 RQ---KVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 86/188 (45%), Gaps = 19/188 (10%)
Query: 498 LGQGGFGSVYLGMLPDGIQ-VAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIE 556
+G G FG L + VAVK +E + + E+ ++ H ++V+ K +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 557 GAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHC 616
H + EY G L + I N+ RF RF + G++Y H +++ H
Sbjct: 86 PTHLAIVMEYASGGELFERICNA---GRFSEDEARFFFQ-QLISGVSYCHA---MQVCHR 138
Query: 617 DIKPENVLLDDNFTA--KVSDFGLAK---LMNREESLVYTTLRGTRGYLAPEWITNNPIS 671
D+K EN LLD + K+ DFG +K L ++ +S V GT Y+APE +
Sbjct: 139 DLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-----GTPAYIAPEVLLKKEYD 193
Query: 672 EK-SDVYS 678
K +DV+S
Sbjct: 194 GKVADVWS 201
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 17/193 (8%)
Query: 497 KLGQGGFGSVYLGM--LPDG--IQVAVKKLE----SIGQGKKEFSAEVTTIGNVHHLHLV 548
KLG G FG V G P G + VAVK L+ S + +F EV + ++ H +L+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
+L G + +++ E GSL + + FL T A+ +A+G+ YL +
Sbjct: 75 RLYGVVLTPPMKMVT-ELAPLGSLLDRL--RKHQGHFL-LGTLSRYAVQVAEGMGYLESK 130
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRGTRGYLAPEWIT 666
+ +H D+ N+LL K+ DFGL + + N + ++ + + APE +
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 187
Query: 667 NNPISEKSDVYSY 679
S SD + +
Sbjct: 188 TRTFSHASDTWMF 200
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
G +++ EV+ + + H +++ L +L E + G L F+ E
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL----FDFLAEKES 110
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENV-LLDDNFTA---KVSDFGLAKL 641
L+ + G+ YLH ++I H D+KPEN+ LLD N K+ DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 642 MNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
++ + + GT ++APE + P+ ++D++S
Sbjct: 168 IDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 24/179 (13%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEG 557
+G G FG V+ L + +VA+KK + Q K+ + E+ + V H ++V LK F
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKK---VLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSN 104
Query: 558 AHRL------LAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGM---AKGLAYLHE 607
+ L EY + + ++ ++ ++ I L M + LAY+H
Sbjct: 105 GDKKDEVFLNLVLEY-----VPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH- 158
Query: 608 ECEVKIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+ I H DIKP+N+LLD + K+ DFG AK++ E V +R Y APE I
Sbjct: 159 --SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC--SRYYRAPELI 213
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 81/177 (45%), Gaps = 14/177 (7%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLE-SIGQGKKEFSAEVT---TIGNVHHLHLVKLKG 552
LG+G FG V L G A+K L+ + K E + +T + N H L LK
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK- 76
Query: 553 FCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ + RL EY G L F+ + E F RF A + L YLH E V
Sbjct: 77 YSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGA-EIVSALDYLHSEKNV 132
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNN 668
V+ D+K EN++LD + K++DFGL K ++ GT YLAPE + +N
Sbjct: 133 --VYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLEDN 186
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 451 HHNKRKRLTKFSQEDLEEDNFLEKISGMPTRFSYDDLCKATKNFSTKLGQGGFGSVYLGM 510
HH+ ++R T + QE + I +P R+ +N S +G G +GSV
Sbjct: 5 HHHSQERPTFYRQE------LNKTIWEVPERY---------QNLSP-VGSGAYGSVCAAF 48
Query: 511 -LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYE 565
G +VAVKKL +SI K+ + E+ + ++ H +++ L A L +
Sbjct: 49 DTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD-VFTPARSLEEFN 106
Query: 566 --YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENV 623
YL + + N + + + +F I + +GL Y+H I+H D+KP N+
Sbjct: 107 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS---ADIIHRDLKPSNL 162
Query: 624 LLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 163 AVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 202
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 17/193 (8%)
Query: 497 KLGQGGFGSVYLGM--LPDG--IQVAVKKLE----SIGQGKKEFSAEVTTIGNVHHLHLV 548
KLG G FG V G P G + VAVK L+ S + +F EV + ++ H +L+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
+L G + +++ E GSL + + FL T A+ +A+G+ YL +
Sbjct: 85 RLYGVVLTPPMKMVT-ELAPLGSLLDRL--RKHQGHFL-LGTLSRYAVQVAEGMGYLESK 140
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRGTRGYLAPEWIT 666
+ +H D+ N+LL K+ DFGL + + N + ++ + + APE +
Sbjct: 141 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 197
Query: 667 NNPISEKSDVYSY 679
S SD + +
Sbjct: 198 TRTFSHASDTWMF 210
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 81/177 (45%), Gaps = 14/177 (7%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLE-SIGQGKKEFSAEVT---TIGNVHHLHLVKLKG 552
LG+G FG V L G A+K L+ + K E + +T + N H L LK
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK- 75
Query: 553 FCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ + RL EY G L F+ + E F RF A + L YLH E
Sbjct: 76 YSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGA-EIVSALDYLH--SEK 129
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNN 668
+V+ D+K EN++LD + K++DFGL K ++ GT YLAPE + +N
Sbjct: 130 NVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLEDN 185
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 17/193 (8%)
Query: 497 KLGQGGFGSVYLGM--LPDG--IQVAVKKLE----SIGQGKKEFSAEVTTIGNVHHLHLV 548
KLG G FG V G P G + VAVK L+ S + +F EV + ++ H +L+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
+L G + +++ E GSL + + FL T A+ +A+G+ YL +
Sbjct: 79 RLYGVVLTPPMKMVT-ELAPLGSLLDRL--RKHQGHFL-LGTLSRYAVQVAEGMGYLESK 134
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRGTRGYLAPEWIT 666
+ +H D+ N+LL K+ DFGL + + N + ++ + + APE +
Sbjct: 135 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 667 NNPISEKSDVYSY 679
S SD + +
Sbjct: 192 TRTFSHASDTWMF 204
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI-YQILRGLKYIHS- 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 196
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 85/191 (44%), Gaps = 22/191 (11%)
Query: 498 LGQGGFGSVYLGMLPD-------GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
LG+G FG V L D ++V K+ K+ EV + + H +++KL
Sbjct: 57 LGKGSFGEVIL--CKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 114
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
F + + L E G L F+ + S I + G+ Y+H+
Sbjct: 115 YEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGITYMHKN-- 168
Query: 611 VKIVHCDIKPENVLLD---DNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
KIVH D+KPEN+LL+ + ++ DFGL+ + E S GT Y+APE + +
Sbjct: 169 -KIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKIGTAYYIAPE-VLH 224
Query: 668 NPISEKSDVYS 678
EK DV+S
Sbjct: 225 GTYDEKCDVWS 235
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 81/177 (45%), Gaps = 14/177 (7%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLE-SIGQGKKEFSAEVT---TIGNVHHLHLVKLKG 552
LG+G FG V L G A+K L+ + K E + +T + N H L LK
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK- 74
Query: 553 FCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ + RL EY G L F+ + E F RF A + L YLH E
Sbjct: 75 YSFQTHDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGA-EIVSALDYLH--SEK 128
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNN 668
+V+ D+K EN++LD + K++DFGL K ++ GT YLAPE + +N
Sbjct: 129 NVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVLEDN 184
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
G +++ EV+ + + H +++ L +L E + G L F+ E
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGEL----FDFLAEKES 110
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENV-LLDDNFTA---KVSDFGLAKL 641
L+ + G+ YLH ++I H D+KPEN+ LLD N K+ DFGLA
Sbjct: 111 LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 167
Query: 642 MNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
++ + + GT ++APE + P+ ++D++S
Sbjct: 168 IDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWS 202
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 85/191 (44%), Gaps = 22/191 (11%)
Query: 498 LGQGGFGSVYLGMLPD-------GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
LG+G FG V L D ++V K+ K+ EV + + H +++KL
Sbjct: 58 LGKGSFGEVIL--CKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 115
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
F + + L E G L F+ + S I + G+ Y+H+
Sbjct: 116 YEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGITYMHKN-- 169
Query: 611 VKIVHCDIKPENVLLD---DNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
KIVH D+KPEN+LL+ + ++ DFGL+ + E S GT Y+APE + +
Sbjct: 170 -KIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKIGTAYYIAPE-VLH 225
Query: 668 NPISEKSDVYS 678
EK DV+S
Sbjct: 226 GTYDEKCDVWS 236
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 522 LESIGQGKKEFSAEVTTIGNV-HHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNST 580
++ I + K++ S E+ + H +++ LK +G H L E + G L I
Sbjct: 57 VKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ- 115
Query: 581 EESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNF----TAKVSDF 636
+F S + + K + YLH + +VH D+KP N+L D ++ DF
Sbjct: 116 ---KFFSEREASFVLHTIGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDF 169
Query: 637 GLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
G AK + E L+ T T ++APE + E D++S
Sbjct: 170 GFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWS 210
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 17/193 (8%)
Query: 497 KLGQGGFGSVYLGM--LPDG--IQVAVKKLE----SIGQGKKEFSAEVTTIGNVHHLHLV 548
KLG G FG V G P G + VAVK L+ S + +F EV + ++ H +L+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
+L G + +++ E GSL + + FL T A+ +A+G+ YL +
Sbjct: 75 RLYGVVLTPPMKMVT-ELAPLGSLLDRL--RKHQGHFL-LGTLSRYAVQVAEGMGYLESK 130
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRGTRGYLAPEWIT 666
+ +H D+ N+LL K+ DFGL + + N + ++ + + APE +
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 667 NNPISEKSDVYSY 679
S SD + +
Sbjct: 188 TRTFSHASDTWMF 200
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 17/193 (8%)
Query: 497 KLGQGGFGSVYLGM--LPDG--IQVAVKKLE----SIGQGKKEFSAEVTTIGNVHHLHLV 548
KLG G FG V G P G + VAVK L+ S + +F EV + ++ H +L+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
+L G + +++ E GSL + + FL T A+ +A+G+ YL +
Sbjct: 79 RLYGVVLTPPMKMVT-ELAPLGSLLDRL--RKHQGHFL-LGTLSRYAVQVAEGMGYLESK 134
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRGTRGYLAPEWIT 666
+ +H D+ N+LL K+ DFGL + + N + ++ + + APE +
Sbjct: 135 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 667 NNPISEKSDVYSY 679
S SD + +
Sbjct: 192 TRTFSHASDTWMF 204
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 19/175 (10%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKE----FSAEVTTIGNVHHLHLVKLK 551
++G G FG+VY + + VA+KK+ G+ E EV + + H + ++ +
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 552 GFCIEGAHRLLAYEY-LGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
G + L EY LG+ S + + ++ T G +GLAYLH
Sbjct: 121 GCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTH-----GALQGLAYLHSH-- 173
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
++H D+K N+LL + K+ DFG A +M V GT ++APE I
Sbjct: 174 -NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVI 222
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 17/193 (8%)
Query: 497 KLGQGGFGSVYLGM--LPDG--IQVAVKKLE----SIGQGKKEFSAEVTTIGNVHHLHLV 548
KLG G FG V G P G + VAVK L+ S + +F EV + ++ H +L+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
+L G + +++ E GSL + + FL T A+ +A+G+ YL +
Sbjct: 85 RLYGVVLTPPMKMVT-ELAPLGSLLDRL--RKHQGHFL-LGTLSRYAVQVAEGMGYLESK 140
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRGTRGYLAPEWIT 666
+ +H D+ N+LL K+ DFGL + + N + ++ + + APE +
Sbjct: 141 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 197
Query: 667 NNPISEKSDVYSY 679
S SD + +
Sbjct: 198 TRTFSHASDTWMF 210
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 33 SPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 91
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 92 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 148
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 149 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 201
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 85/188 (45%), Gaps = 19/188 (10%)
Query: 498 LGQGGFGSVYLGMLPDGIQ-VAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIE 556
+G G FG L + VAVK +E + E+ ++ H ++V+ K +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 557 GAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHC 616
H + EY G L + I N+ RF RF + G++Y H +++ H
Sbjct: 87 PTHLAIVMEYASGGELFERICNA---GRFSEDEARFFFQ-QLISGVSYCHA---MQVCHR 139
Query: 617 DIKPENVLLDDNFTA--KVSDFGLAK---LMNREESLVYTTLRGTRGYLAPEWITNNPIS 671
D+K EN LLD + K+ DFG +K L ++ +S V GT Y+APE +
Sbjct: 140 DLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-----GTPAYIAPEVLLKKEYD 194
Query: 672 EK-SDVYS 678
K +DV+S
Sbjct: 195 GKVADVWS 202
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 19/175 (10%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKE----FSAEVTTIGNVHHLHLVKLK 551
++G G FG+VY + + VA+KK+ G+ E EV + + H + ++ +
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 552 GFCIEGAHRLLAYEY-LGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
G + L EY LG+ S + + ++ T G +GLAYLH
Sbjct: 82 GCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTH-----GALQGLAYLHSH-- 134
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
++H D+K N+LL + K+ DFG A +M V GT ++APE I
Sbjct: 135 -NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVI 183
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 17/193 (8%)
Query: 497 KLGQGGFGSVYLGM--LPDG--IQVAVKKLE----SIGQGKKEFSAEVTTIGNVHHLHLV 548
KLG G FG V G P G + VAVK L+ S + +F EV + ++ H +L+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
+L G + +++ E GSL + + FL T A+ +A+G+ YL +
Sbjct: 75 RLYGVVLTPPMKMVT-ELAPLGSLLDRL--RKHQGHFL-LGTLSRYAVQVAEGMGYLESK 130
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRGTRGYLAPEWIT 666
+ +H D+ N+LL K+ DFGL + + N + ++ + + APE +
Sbjct: 131 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 667 NNPISEKSDVYSY 679
S SD + +
Sbjct: 188 TRTFSHASDTWMF 200
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 30/201 (14%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVT----TIGNVHHLHLV 548
NF LG+G FG V ML D + ++L +I KK+ + T+ L L+
Sbjct: 22 NFLMVLGKGSFGKV---MLAD--RKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALL 76
Query: 549 KLKGF------CIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKG 601
F C + RL EY+ G L +++ + +F F A ++ G
Sbjct: 77 DKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL---MYHIQQVGKFKEPQAVF-YAAEISIG 132
Query: 602 LAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLR---GTRG 658
L +LH+ I++ D+K +NV+LD K++DFG+ K E + T R GT
Sbjct: 133 LFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCK----EHMMDGVTTREFCGTPD 185
Query: 659 YLAPEWITNNPISEKSDVYSY 679
Y+APE I P + D ++Y
Sbjct: 186 YIAPEIIAYQPYGKSVDWWAY 206
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 522 LESIGQGKKEFSAEVTTIGNV-HHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNST 580
++ I + K++ S E+ + H +++ LK +G H L E + G L I
Sbjct: 57 VKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ- 115
Query: 581 EESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNF----TAKVSDF 636
+F S + + K + YLH + +VH D+KP N+L D ++ DF
Sbjct: 116 ---KFFSEREASFVLHTIGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDF 169
Query: 637 GLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
G AK + E L+ T T ++APE + E D++S
Sbjct: 170 GFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWS 210
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 36/210 (17%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIE 556
LGQG FG V D A+KK+ + +EV + +++H ++V+ +E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 557 -------------GAHRLLAYEYLGNGSLDKWIFNST-EESRFLSWNTRFNIALGMAKGL 602
+ + EY N +L I + + R W I + L
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL----EAL 129
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLV------------- 649
+Y+H + I+H D+KP N+ +D++ K+ DFGLAK ++R ++
Sbjct: 130 SYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 650 YTTLRGTRGYLAPEWIT-NNPISEKSDVYS 678
T+ GT Y+A E + +EK D+YS
Sbjct: 187 LTSAIGTAMYVATEVLDGTGHYNEKIDMYS 216
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 10/147 (6%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKGF 553
K+G+G +G VY G A+KK LE +G + E++ + + H ++VKL
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKI 613
+L +E+L K + + E L T + L + G+AY H+ ++
Sbjct: 69 IHTKKRLVLVFEHLDQDL--KKLLDVCEGG--LESVTAKSFLLQLLNGIAYCHDR---RV 121
Query: 614 VHCDIKPENVLLDDNFTAKVSDFGLAK 640
+H D+KP+N+L++ K++DFGLA+
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 33 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 91
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 92 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 148
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 149 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 201
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 10/147 (6%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKGF 553
K+G+G +G VY G A+KK LE +G + E++ + + H ++VKL
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKI 613
+L +E+L K + + E L T + L + G+AY H+ ++
Sbjct: 69 IHTKKRLVLVFEHLDQDL--KKLLDVCEGG--LESVTAKSFLLQLLNGIAYCHDR---RV 121
Query: 614 VHCDIKPENVLLDDNFTAKVSDFGLAK 640
+H D+KP+N+L++ K++DFGLA+
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 74/147 (50%), Gaps = 10/147 (6%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKGF 553
K+G+G +G VY G A+KK LE +G + E++ + + H ++VKL
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKI 613
+L +E+L K + + E L T + L + G+AY H+ ++
Sbjct: 69 IHTKKRLVLVFEHLDQDL--KKLLDVCEGG--LESVTAKSFLLQLLNGIAYCHDR---RV 121
Query: 614 VHCDIKPENVLLDDNFTAKVSDFGLAK 640
+H D+KP+N+L++ K++DFGLA+
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 13/169 (7%)
Query: 488 CKATKNFSTK--LGQGGFGSVYLGMLPDGIQ-VAVKKLESIGQGK---KEFSAEVTTIGN 541
K N+ K +G+G +G VYL + + VA+KK+ + + K E+T +
Sbjct: 24 VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNR 83
Query: 542 VHHLHLVKLKGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMA 599
+ ++++L I LL ++ Y+ D + + FL+ I +
Sbjct: 84 LKSDYIIRLHDLII--PEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLL 141
Query: 600 KGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESL 648
G ++HE I+H D+KP N LL+ + + K+ DFGLA+ +N ++ +
Sbjct: 142 LGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDI 187
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 17/180 (9%)
Query: 498 LGQGGFGSVYLGMLPDG------IQVAVKKLESIGQGKKEFS---AEVTTIGNVHHLHLV 548
LG+GG+G V+ G + V K I + K+ + AE + V H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
L G L EYL G L E F+ F +A ++ L +LH++
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYLA-EISMALGHLHQK 140
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNN 668
I++ D+KPEN++L+ K++DFGL K + + V T GT Y+APE + +
Sbjct: 141 G---IIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHTFCGTIEYMAPEILMRS 196
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 39 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 97
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 98 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 154
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 155 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 207
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGXVATRWYRAPEIMLN 196
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 29/195 (14%)
Query: 497 KLGQGGFGSVYL-----GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLK 551
KLG G +G V L + I++ K S K EV + + H +++KL
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSK-LLEEVAVLKLLDHPNIMKLY 102
Query: 552 GFCIEGAHRLLAYE-YLGNGSLDKWI----FNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
F + + L E Y G D+ I FN + + + + G+ YLH
Sbjct: 103 DFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQ---------VLSGVTYLH 153
Query: 607 EECEVKIVHCDIKPENVLL---DDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
+ IVH D+KPEN+LL + + K+ DFGL+ + ++ + GT Y+APE
Sbjct: 154 KH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM--KERLGTAYYIAPE 208
Query: 664 WITNNPISEKSDVYS 678
+ EK DV+S
Sbjct: 209 -VLRKKYDEKCDVWS 222
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 83/188 (44%), Gaps = 12/188 (6%)
Query: 489 KATKNFSTKLGQGGFGSVYLG-MLPDGIQVAVKKL-ESIGQGKKEFSAEVTTIGNVHHLH 546
+A LG+GGFG+V+ G L D +QVA+K + + G S VT V L
Sbjct: 30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLW 89
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAK----GL 602
V G G RLL + G + + F + + G ++ +
Sbjct: 90 KVGAGG-GHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQV 148
Query: 603 AYLHEECEVK-IVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYL 660
+ C + +VH DIK EN+L+D AK+ DFG L++ E YT GTR Y
Sbjct: 149 VAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP---YTDFDGTRVYS 205
Query: 661 APEWITNN 668
PEWI+ +
Sbjct: 206 PPEWISRH 213
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 196
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 33 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 91
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 92 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 148
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 149 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 201
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 27 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 85
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 86 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 142
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 143 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 195
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 196
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 93/194 (47%), Gaps = 24/194 (12%)
Query: 497 KLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGK-KEFSAEVTTIGNVHHLHLVKL-KGF 553
+LG G FG VY + + A K +++ + + +++ E+ + + H ++VKL F
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKI 613
E +L E+ G++D + E R L+ + + L YLH+ KI
Sbjct: 104 YYENNLWIL-IEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLHDN---KI 156
Query: 614 VHCDIKPENVLLDDNFTAKVSDFGLA----KLMNREESLVYTTLRGTRGYLAPEWIT--- 666
+H D+K N+L + K++DFG++ + + R +S + GT ++APE +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-----GTPYWMAPEVVMCET 211
Query: 667 --NNPISEKSDVYS 678
+ P K+DV+S
Sbjct: 212 SKDRPYDYKADVWS 225
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 33 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 91
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 92 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 148
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 149 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 201
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 88/182 (48%), Gaps = 23/182 (12%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV + G+++AVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 57 SPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 115
Query: 551 -----KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
+E + + +L L+ N + + + +F I + +GL Y+
Sbjct: 116 LDVFTPATSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLI-YQILRGLKYI 170
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
H I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE +
Sbjct: 171 HS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIM 223
Query: 666 TN 667
N
Sbjct: 224 LN 225
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 196
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 196
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 25 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 83
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 84 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 140
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 141 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 193
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 93/194 (47%), Gaps = 24/194 (12%)
Query: 497 KLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGK-KEFSAEVTTIGNVHHLHLVKL-KGF 553
+LG G FG VY + + A K +++ + + +++ E+ + + H ++VKL F
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKI 613
E +L E+ G++D + E R L+ + + L YLH+ KI
Sbjct: 104 YYENNLWIL-IEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLHDN---KI 156
Query: 614 VHCDIKPENVLLDDNFTAKVSDFGLA----KLMNREESLVYTTLRGTRGYLAPEWIT--- 666
+H D+K N+L + K++DFG++ + + R +S + GT ++APE +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-----GTPYWMAPEVVMCET 211
Query: 667 --NNPISEKSDVYS 678
+ P K+DV+S
Sbjct: 212 SKDRPYDYKADVWS 225
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 40 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 98
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 99 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 155
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 208
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 30 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 88
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 89 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 145
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 146 --ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 198
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 196
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 40 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 98
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 99 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 155
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 208
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 40 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 98
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 99 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 155
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 208
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 196
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 82
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 83 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 139
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 140 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 192
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 25 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 83
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 84 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 140
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 141 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 193
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 26 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 84
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 85 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 141
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 142 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 194
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 196
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 18/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLES-IGQGKK---EFSAEVTTIGNVHHLHLVKL-- 550
LG GG V+L L D VAVK L + + + F E ++H +V +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 551 --KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
+ G + EY+ +L + ++ + + L + H+
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSHQN 135
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT--LRGTRGYLAPEWIT 666
I+H D+KP N+L+ KV DFG+A+ + + V T + GT YL+PE
Sbjct: 136 G---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQAR 192
Query: 667 NNPISEKSDVYS 678
+ + +SDVYS
Sbjct: 193 GDSVDARSDVYS 204
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 93
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 94 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 150
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 203
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 196
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 34 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 92
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 93 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 149
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 150 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 202
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 30 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 88
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 89 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 145
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 198
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 30 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 88
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 89 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 145
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 198
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 34 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 92
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 93 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 149
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 150 --ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 202
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 30 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 88
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 89 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 145
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 198
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 21/195 (10%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGI---QVAVKKLESIGQGKKEFSA---EVTTIGNVHHLH 546
N LG+G FG V D I + AVK + K+ S EV + + H +
Sbjct: 25 NIVCMLGKGSFGEVL--KCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
++KL + + + E G L F+ + + S + I + G+ Y+H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 607 EECEVKIVHCDIKPENVLL---DDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
+ IVH D+KPEN+LL + + K+ DFGL+ + + GT Y+APE
Sbjct: 139 KH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM--KDRIGTAYYIAPE 193
Query: 664 WITNNPISEKSDVYS 678
+ EK DV+S
Sbjct: 194 -VLRGTYDEKCDVWS 207
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 19/191 (9%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVK-----KLESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+LG+G F V M +P G + A K KL + K E A + + + H ++V+L
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRL--LKHPNIVRL 68
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
E L ++ + G L F + S + + + + + H
Sbjct: 69 HDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILESVNHCHLN-- 122
Query: 611 VKIVHCDIKPENVLL---DDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
IVH D+KPEN+LL K++DFGLA + ++ + GT GYL+PE +
Sbjct: 123 -GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ-AWFGFAGTPGYLSPEVLRK 180
Query: 668 NPISEKSDVYS 678
+P + D+++
Sbjct: 181 DPYGKPVDMWA 191
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 21/195 (10%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGI---QVAVKKLESIGQGKKEFSA---EVTTIGNVHHLH 546
N LG+G FG V D I + AVK + K+ S EV + + H +
Sbjct: 25 NIVCMLGKGSFGEVL--KCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
++KL + + + E G L F+ + + S + I + G+ Y+H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 607 EECEVKIVHCDIKPENVLL---DDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
+ IVH D+KPEN+LL + + K+ DFGL+ + + GT Y+APE
Sbjct: 139 KH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM--KDRIGTAYYIAPE 193
Query: 664 WITNNPISEKSDVYS 678
+ EK DV+S
Sbjct: 194 -VLRGTYDEKCDVWS 207
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 48 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 106
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 107 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 163
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 164 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 216
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 39 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 97
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 98 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 154
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 155 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 207
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 19/191 (9%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVK-----KLESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+LG+G F V M +P G + A K KL + K E A + + + H ++V+L
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRL--LKHPNIVRL 68
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
E L ++ + G L F + S + + + + + H
Sbjct: 69 HDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILESVNHCHLN-- 122
Query: 611 VKIVHCDIKPENVLL---DDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
IVH D+KPEN+LL K++DFGLA + ++ + GT GYL+PE +
Sbjct: 123 -GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ-AWFGFAGTPGYLSPEVLRK 180
Query: 668 NPISEKSDVYS 678
+P + D+++
Sbjct: 181 DPYGKPVDMWA 191
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 47 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 105
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 106 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 162
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 163 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 215
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 51 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 109
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 110 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 166
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 167 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 219
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 85/189 (44%), Gaps = 18/189 (9%)
Query: 498 LGQGGFGSVYLGMLP-DGIQVAVKKL--ESIGQ--GKKEFSAEVTTIGNVHHLHLVKLKG 552
LG+G FG V L G + AVK + + Q K+ EV + + H ++ KL
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYE 93
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
F + + L E G L F+ + S I + G+ Y H+ K
Sbjct: 94 FFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAARIIRQVLSGITYXHKN---K 146
Query: 613 IVHCDIKPENVLLD---DNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNP 669
IVH D+KPEN+LL+ + ++ DFGL+ + E S GT Y+APE + +
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKXKDKIGTAYYIAPE-VLHGT 203
Query: 670 ISEKSDVYS 678
EK DV+S
Sbjct: 204 YDEKCDVWS 212
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIE 556
++G+G +G V++G G +VAVK + + E+ + H +++ I+
Sbjct: 44 QIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIK 102
Query: 557 GA----HRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC--- 609
G L +Y NGSL ++ ++T +++ + +A GL +LH E
Sbjct: 103 GTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSM-----LKLAYSSVSGLCHLHTEIFST 157
Query: 610 --EVKIVHCDIKPENVLLDDNFTAKVSDFGLA-KLMN--REESLVYTTLRGTRGYLAPE 663
+ I H D+K +N+L+ N T ++D GLA K ++ E + T GT+ Y+ PE
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPE 216
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 20/202 (9%)
Query: 494 FSTKLGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNV-HHLHLVKLK 551
F KLG+GGF V L L DG A+K++ Q +E + + + +H ++++L
Sbjct: 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLV 92
Query: 552 GFCIE--GAHR--LLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHE 607
+C+ GA L + G+L I ++ FL+ + + LG+ +GL +H
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA 152
Query: 608 ECEVKIVHCDIKPENVLLDDNFTAKVSDFGL--AKLMNREESLVYTTL------RGTRGY 659
+ H D+KP N+LL D + D G ++ E S TL R T Y
Sbjct: 153 K---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISY 209
Query: 660 LAPEWITNNP---ISEKSDVYS 678
APE + I E++DV+S
Sbjct: 210 RAPELFSVQSHCVIDERTDVWS 231
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLI-YQILRGLKYIHS- 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGL + + E T TR Y APE + N
Sbjct: 144 --ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE----MTGYVATRWYRAPEIMLN 196
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 18/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLES-IGQGKK---EFSAEVTTIGNVHHLHLVKL-- 550
LG GG V+L L D VAVK L + + + F E ++H +V +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 551 --KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
+ G + EY+ +L + ++ + + L + H+
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSHQN 135
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT--LRGTRGYLAPEWIT 666
I+H D+KP N+++ KV DFG+A+ + + V T + GT YL+PE
Sbjct: 136 G---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 667 NNPISEKSDVYS 678
+ + +SDVYS
Sbjct: 193 GDSVDARSDVYS 204
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 70/137 (51%), Gaps = 17/137 (12%)
Query: 535 EVTTIGNVHHLHLVKLKGFCIEG--AHRLLAYEYLGNG---SLDKWIFNSTEESRFLSWN 589
E+ + + H ++VKL + H + +E + G + S +++RF +
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQD 145
Query: 590 TRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLV 649
+ KG+ YLH + KI+H DIKP N+L+ ++ K++DFG++ ++L+
Sbjct: 146 --------LIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALL 194
Query: 650 YTTLRGTRGYLAPEWIT 666
T+ GT ++APE ++
Sbjct: 195 SNTV-GTPAFMAPESLS 210
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 18/192 (9%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLES-IGQGKK---EFSAEVTTIGNVHHLHLVKL-- 550
LG GG V+L L D VAVK L + + + F E ++H +V +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 551 --KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
+ G + EY+ +L + ++ + + L + H+
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSHQN 135
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT--LRGTRGYLAPEWIT 666
I+H D+KP N+++ KV DFG+A+ + + V T + GT YL+PE
Sbjct: 136 G---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 667 NNPISEKSDVYS 678
+ + +SDVYS
Sbjct: 193 GDSVDARSDVYS 204
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 14/98 (14%)
Query: 592 FNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR--EESLV 649
+I + +A+ + +LH + ++H D+KP N+ + KV DFGL M++ EE V
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 650 YTTLR---------GTRGYLAPEWITNNPISEKSDVYS 678
T + GT+ Y++PE I N S K D++S
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFS 261
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ D+GLA+ + E T TR Y APE + N
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE----MTGYVATRWYRAPEIMLN 196
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 93
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 94 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 150
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE----MTGYVATRWYRAPEIMLN 203
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 93
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 94 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 150
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE----MTGYVATRWYRAPEIMLN 203
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 35 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 93
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 94 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 150
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE----MTGYVATRWYRAPEIMLN 203
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT--LRGTRGYLAPEWITNNPI 670
I+H D+KP N+++ KV DFG+A+ + + V T + GT YL+PE + +
Sbjct: 154 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 213
Query: 671 SEKSDVYS 678
+SDVYS
Sbjct: 214 DARSDVYS 221
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT--LRGTRGYLAPEWITNNPI 670
I+H D+KP N+++ KV DFG+A+ + + V T + GT YL+PE + +
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 671 SEKSDVYS 678
+SDVYS
Sbjct: 197 DARSDVYS 204
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 21/195 (10%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGI---QVAVKKLESIGQGKKEFSA---EVTTIGNVHHLH 546
N LG+G FG V D I + AVK + K+ S EV + + H +
Sbjct: 25 NIVCMLGKGSFGEVL--KCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
++KL + + + E G L F+ + + S + I + G+ Y+H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMH 138
Query: 607 EECEVKIVHCDIKPENVLL---DDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
+ IVH D+KPEN+LL + + K+ DFGL+ + + GT Y+APE
Sbjct: 139 KH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI--GTAYYIAPE 193
Query: 664 WITNNPISEKSDVYS 678
+ EK DV+S
Sbjct: 194 -VLRGTYDEKCDVWS 207
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT--LRGTRGYLAPEWITNNPI 670
I+H D+KP N+++ KV DFG+A+ + + V T + GT YL+PE + +
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 671 SEKSDVYS 678
+SDVYS
Sbjct: 197 DARSDVYS 204
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G +VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 82
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + ++ + +F I + +GL Y+H
Sbjct: 83 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLI-YQILRGLKYIHS- 139
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 140 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 192
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 22/158 (13%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQ-VAVKKLESIGQGKKEFSAEVTTIGNVHH 544
DL + KLG G F +V+L G + VA+K ++S + E+ + +V +
Sbjct: 17 DLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRN 76
Query: 545 --------------LHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNT 590
L K+ G + G H + +E LG+ L KWI S + L
Sbjct: 77 SDPNDPNREMVVQLLDDFKISG--VNGTHICMVFEVLGHHLL-KWIIKSNYQGLPLPCVK 133
Query: 591 RFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDN 628
+ I + +GL YLH +C +I+H DIKPEN+LL N
Sbjct: 134 K--IIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVN 167
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 27/164 (16%)
Query: 498 LGQGGFGSVYLGMLPDGIQ-VAVKKLESIGQGK---KEFSAEVTTIGNVHHLHLVKLKGF 553
+G+G +G VYL + + VA+KK+ + + K E+T + + ++++L
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDL 93
Query: 554 CIEGAHRLLAYEYL------GNGSLDKW----IFNSTEESRFLSWNTRFNIALGMAKGLA 603
I LL ++ L + L K IF + E + + +N + G
Sbjct: 94 IIPDD--LLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYN--------LLLGEN 143
Query: 604 YLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREES 647
++HE I+H D+KP N LL+ + + KV DFGLA+ +N E+
Sbjct: 144 FIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKD 184
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 490 ATKNFSTK---------LGQGGFGSV-YLGMLPDGIQVAVKKLESI--GQGKKEFSAEV- 536
A +NF K LG+G +G V +P G AVK++ + Q +K ++
Sbjct: 25 AXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLD 84
Query: 537 TTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIAL 596
+ V V G + E L + SLDK+ ++ + + + IA+
Sbjct: 85 ISXRTVDCPFTVTFYGALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAV 143
Query: 597 GMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGT 656
+ K L +LH ++ ++H D+KP NVL++ K DFG++ + + + G
Sbjct: 144 SIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLV--DDVAKDIDAGC 199
Query: 657 RGYLAPEWITNNP------ISEKSDVYS 678
+ Y APE I NP S KSD++S
Sbjct: 200 KPYXAPERI--NPELNQKGYSVKSDIWS 225
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 92/194 (47%), Gaps = 24/194 (12%)
Query: 497 KLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGK-KEFSAEVTTIGNVHHLHLVKL-KGF 553
+LG G FG VY + + A K +++ + + +++ E+ + + H ++VKL F
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKI 613
E +L E+ G++D + E R L+ + + L YLH+ KI
Sbjct: 104 YYENNLWIL-IEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLHDN---KI 156
Query: 614 VHCDIKPENVLLDDNFTAKVSDFGLA----KLMNREESLVYTTLRGTRGYLAPEWIT--- 666
+H D+K N+L + K++DFG++ + + R + + GT ++APE +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI-----GTPYWMAPEVVMCET 211
Query: 667 --NNPISEKSDVYS 678
+ P K+DV+S
Sbjct: 212 SKDRPYDYKADVWS 225
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 19/188 (10%)
Query: 498 LGQGGFGSVYLGMLPDGIQ-VAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIE 556
+G G FG L + VAVK +E + + E+ ++ H ++V+ K +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 557 GAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHC 616
H + EY G L + I N+ RF RF + G++Y H +++ H
Sbjct: 87 PTHLAIVMEYASGGELFERICNA---GRFSEDEARFFFQ-QLISGVSYCHA---MQVCHR 139
Query: 617 DIKPENVLLDDNFTA--KVSDFGLAK---LMNREESLVYTTLRGTRGYLAPEWITNNPIS 671
D+K EN LLD + K+ FG +K L ++ +S V GT Y+APE +
Sbjct: 140 DLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTV-----GTPAYIAPEVLLKKEYD 194
Query: 672 EK-SDVYS 678
K +DV+S
Sbjct: 195 GKVADVWS 202
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 24/193 (12%)
Query: 491 TKNFST--KLGQGGFGSVYLGMLPDGIQVAVKK------------LESIGQGKKEFSAEV 536
++ +ST LG G FG V+ + + + V K +E GK + E+
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGK--VTLEI 80
Query: 537 TTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIAL 596
+ V H +++K+ L E G+G LD +F + L I
Sbjct: 81 AILSRVEHANIIKVLDIFENQGFFQLVMEKHGSG-LD--LFAFIDRHPRLDEPLASYIFR 137
Query: 597 GMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGT 656
+ + YL + I+H DIK EN+++ ++FT K+ DFG A + R + ++ T GT
Sbjct: 138 QLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK--LFYTFCGT 192
Query: 657 RGYLAPEWITNNP 669
Y APE + NP
Sbjct: 193 IEYCAPEVLMGNP 205
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 18/158 (11%)
Query: 498 LGQGGFGSVYLGMLP--DG--IQVAVKKLES---IGQGKKEFSAEVTTIGNVHHLHLVKL 550
LG+G FGSV L DG ++VAVK L++ +EF E + H H+ KL
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 551 KGFCIEGAHR------LLAYEYLGNGSLDKWIFNST--EESRFLSWNTRFNIALGMAKGL 602
G + + ++ ++ +G L ++ S E L T + +A G+
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAK 640
YL +H D+ N +L ++ T V+DFGL++
Sbjct: 151 EYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSR 185
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 17/180 (9%)
Query: 498 LGQGGFGSVYLGMLPDG------IQVAVKKLESIGQGKKEFS---AEVTTIGNVHHLHLV 548
LG+GG+G V+ G + V K I + K+ + AE + V H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
L G L EYL G L E F+ F +A ++ L +LH++
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYLA-EISMALGHLHQK 140
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNN 668
I++ D+KPEN++L+ K++DFGL K + + V GT Y+APE + +
Sbjct: 141 G---IIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHXFCGTIEYMAPEILMRS 196
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 51 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 109
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 110 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 166
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + +E Y TR Y APE + N
Sbjct: 167 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-DEMXGYV---ATRWYRAPEIMLN 219
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 45/212 (21%)
Query: 498 LGQGGFGSVY--LGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHH-------LHLV 548
LG+G FG V L QVA+K + ++G+ ++ E+ + + L ++
Sbjct: 36 LGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVL 95
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSW---NTRFNIALGMAKGLAYL 605
F G H +A+E LG + F +E+ F + + R ++A + L +L
Sbjct: 96 MSDWFNFHG-HMCIAFELLGKNT-----FEFLKENNFQPYPLPHVR-HMAYQLCHALRFL 148
Query: 606 HEECEVKIVHCDIKPENVLLDD-------------------NFTAKVSDFGLAKLMNREE 646
HE ++ H D+KPEN+L + N + +V+DFG A +
Sbjct: 149 HEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH- 204
Query: 647 SLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
+TT+ TR Y PE I ++ DV+S
Sbjct: 205 ---HTTIVATRHYRPPEVILELGWAQPCDVWS 233
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 36/210 (17%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIE 556
LGQG FG V D A+KK+ + +EV + +++H ++V+ +E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLE 73
Query: 557 -------------GAHRLLAYEYLGNGSLDKWIFNST-EESRFLSWNTRFNIALGMAKGL 602
+ + EY N +L I + + R W + + + L
Sbjct: 74 RRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR----LFRQILEAL 129
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLV------------- 649
+Y+H + I+H ++KP N+ +D++ K+ DFGLAK ++R ++
Sbjct: 130 SYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 650 YTTLRGTRGYLAPEWIT-NNPISEKSDVYS 678
T+ GT Y+A E + +EK D YS
Sbjct: 187 LTSAIGTAXYVATEVLDGTGHYNEKIDXYS 216
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 43/211 (20%)
Query: 498 LGQGGFGSVY--LGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHH-------LHLV 548
LG+G FG V L QVA+K + ++G+ ++ E+ + + L ++
Sbjct: 27 LGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVL 86
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRF--NIALGMAKGLAYLH 606
F G H +A+E LG + F +E+ F + ++A + L +LH
Sbjct: 87 MSDWFNFHG-HMCIAFELLGKNT-----FEFLKENNFQPYPLPHVRHMAYQLCHALRFLH 140
Query: 607 EECEVKIVHCDIKPENVLLDD-------------------NFTAKVSDFGLAKLMNREES 647
E ++ H D+KPEN+L + N + +V+DFG A +
Sbjct: 141 EN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH-- 195
Query: 648 LVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
+TT+ TR Y PE I ++ DV+S
Sbjct: 196 --HTTIVATRHYRPPEVILELGWAQPCDVWS 224
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G +VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 196
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 45/212 (21%)
Query: 498 LGQGGFGSVY--LGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHH-------LHLV 548
LG+G FG V L QVA+K + ++G+ ++ E+ + + L ++
Sbjct: 59 LGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVL 118
Query: 549 KLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSW---NTRFNIALGMAKGLAYL 605
F G H +A+E LG + F +E+ F + + R ++A + L +L
Sbjct: 119 MSDWFNFHG-HMCIAFELLGKNT-----FEFLKENNFQPYPLPHVR-HMAYQLCHALRFL 171
Query: 606 HEECEVKIVHCDIKPENVLLDD-------------------NFTAKVSDFGLAKLMNREE 646
HE ++ H D+KPEN+L + N + +V+DFG A +
Sbjct: 172 HEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH- 227
Query: 647 SLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
+TT+ TR Y PE I ++ DV+S
Sbjct: 228 ---HTTIVATRHYRPPEVILELGWAQPCDVWS 256
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G +VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 82
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 83 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 139
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 140 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 192
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 24/188 (12%)
Query: 464 EDLEEDNFLEKISGMPTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPDGIQ-VAVKKL 522
+D E+++ + G DL + KLG G F +V+L G + VA+K +
Sbjct: 5 DDEEQEDPADYCKGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVV 64
Query: 523 ESIGQGKKEFSAEVTTIGNVHH-----------LHLV---KLKGFCIEGAHRLLAYEYLG 568
+S + E+ + V + L+ K+ G + G H + +E LG
Sbjct: 65 KSAQHYTETALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISG--MNGIHVCMVFEVLG 122
Query: 569 NGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLL--D 626
+ L KWI S + L +I + +GL YLH +C KI+H DIKPEN+L+ D
Sbjct: 123 HHLL-KWIIKSNYQG--LPVRCVKSIIRQVLQGLDYLHSKC--KIIHTDIKPENILMCVD 177
Query: 627 DNFTAKVS 634
D + +++
Sbjct: 178 DAYVRRMA 185
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G +VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 48 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 106
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 107 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 163
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 164 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 216
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 22/158 (13%)
Query: 486 DLCKATKNFSTKLGQGGFGSVYLGMLPDGIQ-VAVKKLESIGQGKKEFSAEVTTIGNVHH 544
DL + KLG G F +V+L G + VA+K ++S + E+ + +V +
Sbjct: 33 DLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRN 92
Query: 545 --------------LHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNT 590
L K+ G + G H + +E LG+ L KWI S + L
Sbjct: 93 SDPNDPNREMVVQLLDDFKISG--VNGTHICMVFEVLGHHLL-KWIIKSNYQGLPLPCVK 149
Query: 591 RFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDN 628
+ I + +GL YLH +C +I+H DIKPEN+LL N
Sbjct: 150 K--IIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVN 183
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G +VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 47 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 105
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 106 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 162
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 163 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 215
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 17/177 (9%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
+G G +GSV G +VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 98
Query: 553 FCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 99 -VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS--- 153
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE + N
Sbjct: 154 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLN 206
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 21/190 (11%)
Query: 498 LGQGGFGSVYLGMLPDGIQV-----AVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
LG+GGF Y D +V K + K++ S E+ ++ + H+V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 553 FCIEGAHRLLAYEYLGNGSL----DKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
F + + E SL + + E+R+ T +G+ YLH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT--------IQGVQYLHNN 161
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNN 668
+++H D+K N+ L+D+ K+ DFGLA + + TL GT Y+APE +
Sbjct: 162 ---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKTLCGTPNYIAPEVLCKK 217
Query: 669 PISEKSDVYS 678
S + D++S
Sbjct: 218 GHSFEVDIWS 227
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 600 KGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGY 659
+GL YLH+ I+H D+KP N+LLD+N K++DFGLAK Y TR Y
Sbjct: 123 QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR-AYXHQVVTRWY 178
Query: 660 LAPEWI 665
APE +
Sbjct: 179 RAPELL 184
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 34/189 (17%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKL-ESIGQGK-----------KEFSAEVTTIGNVHHL 545
+ G +G+V G+ +GI VA+K++ ++ G+ K E+ + + HH
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 546 HLVKLKGFCIE----GAHRLLAYEYLGNGSL-----DKWIFNSTEESRFLSWNTRFNIAL 596
+++ L+ + H+L L L D+ I S + ++ ++ I L
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYH----ILL 145
Query: 597 GMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGT 656
G LH E +VH D+ P N+LL DN + DF LA+ + + +
Sbjct: 146 G-------LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH-- 196
Query: 657 RGYLAPEWI 665
R Y APE +
Sbjct: 197 RWYRAPELV 205
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 82/174 (47%), Gaps = 18/174 (10%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLESIGQGK-KEFSA---EVTTIGNVHHLHLVKLKG 552
LG G FG V L + G A+K L+ K K+ E + V+ LVKL+
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ ++ + EY+ G + F+ RF + RF A + YLH +
Sbjct: 95 SFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---L 146
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+++ D+KPEN+L+D +V+DFG AK R + + TL GT YLAPE I
Sbjct: 147 DLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-TLCGTPEYLAPEII 196
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 81/174 (46%), Gaps = 18/174 (10%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLESIGQGK-KEFSA---EVTTIGNVHHLHLVKLKG 552
LG G FG V L + G A+K L+ K KE E + V+ LVKL+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ ++ + EY G + F+ RF + RF A + YLH +
Sbjct: 109 SFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---L 160
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+++ D+KPEN+++D KV+DFGLAK R + + L GT YLAPE I
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGLAK---RVKGRTW-XLCGTPEYLAPEII 210
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 34/189 (17%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKL-ESIGQGK-----------KEFSAEVTTIGNVHHL 545
+ G +G+V G+ +GI VA+K++ ++ G+ K E+ + + HH
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 546 HLVKLKGFCIE----GAHRLLAYEYLGNGSL-----DKWIFNSTEESRFLSWNTRFNIAL 596
+++ L+ + H+L L L D+ I S + ++ ++ I L
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYH----ILL 145
Query: 597 GMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGT 656
G LH E +VH D+ P N+LL DN + DF LA+ + + +
Sbjct: 146 G-------LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH-- 196
Query: 657 RGYLAPEWI 665
R Y APE +
Sbjct: 197 RWYRAPELV 205
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 18/180 (10%)
Query: 494 FSTKLGQGGFGSVYLGMLPD-GIQVAVKKLES---IGQGKKEFSAEVTTIGNVHHLHLVK 549
F LG+G FG V L + + G AVK L+ + E + I ++ H
Sbjct: 27 FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFL 86
Query: 550 LKGFC-IEGAHRLL-AYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHE 607
+ FC + RL E++ G L +F+ + RF RF A + L +LH+
Sbjct: 87 TQLFCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARARF-YAAEIISALMFLHD 142
Query: 608 ECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAK--LMNREESLVYTTLRGTRGYLAPEWI 665
+ I++ D+K +NVLLD K++DFG+ K + N + T GT Y+APE +
Sbjct: 143 K---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN---GVTTATFCGTPDYIAPEIL 196
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 81/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 122
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEY 177
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + TL GT YLAPE
Sbjct: 178 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGATW-TLCGTPEYLAPEI 230
Query: 665 I 665
I
Sbjct: 231 I 231
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 90/208 (43%), Gaps = 40/208 (19%)
Query: 478 MPTRFSYDDLCKATKNFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLE-SIGQGKKEFSAE 535
+P +F +D+ K T S LG+G + V + L +G + AVK +E G + E
Sbjct: 6 LPGKF--EDMYKLT---SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFRE 60
Query: 536 VTTI----GNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWI-----FNSTEESRFL 586
V T+ GN + L L++ F + L +E L GS+ I FN E SR
Sbjct: 61 VETLYQCQGNKNILELIE---FFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASR-- 115
Query: 587 SWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDN---FTAKVSDFGLAKLMN 643
+ +A L +LH + I H D+KPEN+L + K+ DF L M
Sbjct: 116 -------VVRDVAAALDFLHTK---GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMK 165
Query: 644 REESLV------YTTLRGTRGYLAPEWI 665
S TT G+ Y+APE +
Sbjct: 166 LNNSCTPITTPELTTPCGSAEYMAPEVV 193
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 82/174 (47%), Gaps = 18/174 (10%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLESIGQGK-KEFSA---EVTTIGNVHHLHLVKLKG 552
LG G FG V L + G A+K L+ K K+ E + V+ LVKL+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ ++ + EY+ G + F+ RF + RF A + YLH +
Sbjct: 110 SFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---L 161
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+++ D+KPEN+L+D +V+DFG AK R + + TL GT YLAPE I
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-TLCGTPEYLAPEII 211
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 19/188 (10%)
Query: 498 LGQGGFGSVYLGMLPDGIQ-VAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIE 556
+G G FG L + VAVK +E + + E+ ++ H ++V+ K +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 557 GAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHC 616
H + EY G L + I N+ RF RF + G++Y H +++ H
Sbjct: 87 PTHLAIVMEYASGGELFERICNA---GRFSEDEARFFFQ-QLISGVSYCHA---MQVCHR 139
Query: 617 DIKPENVLLDDNFTA--KVSDFGLAKLMNREESLVYTTLR---GTRGYLAPEWITNNPIS 671
D+K EN LLD + K+ FG +K S++++ + GT Y+APE +
Sbjct: 140 DLKLENTLLDGSPAPRLKICAFGYSK-----SSVLHSQPKDTVGTPAYIAPEVLLKKEYD 194
Query: 672 EK-SDVYS 678
K +DV+S
Sbjct: 195 GKVADVWS 202
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 26/156 (16%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAK--------GLAY 604
L +E+L S + +F+ + I L + K GLA+
Sbjct: 71 VIHTENKLYLVFEFL-----------SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAK 640
H +++H D+KPEN+L++ K++DFGLA+
Sbjct: 120 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 26/156 (16%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAK--------GLAY 604
L +E+L S + +F+ + I L + K GLA+
Sbjct: 73 VIHTENKLYLVFEFL-----------SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAK 640
H +++H D+KPEN+L++ K++DFGLA+
Sbjct: 122 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 154
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 33/185 (17%)
Query: 498 LGQGGFGSV---YLGMLPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+G G +GSV Y L +VAVKKL +S+ ++ + E+ + ++ H +++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 92
Query: 551 -----KGFCIEGAHRLLAYEYLGNGSLDKWIFN---STEESRFLSWNTRFNIALGMAKGL 602
IE + L L+ + + S E +FL + + +GL
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQ--------LLRGL 144
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAP 662
Y+H I+H D+KP NV ++++ ++ DFGLA+ + E T TR Y AP
Sbjct: 145 KYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYVATRWYRAP 197
Query: 663 EWITN 667
E + N
Sbjct: 198 EIMLN 202
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 97/220 (44%), Gaps = 22/220 (10%)
Query: 473 EKISGMPTRFSYDD--LCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKK--LESIGQG 528
E S +P + DD L + + +T + Q + + P +VA+K+ LE
Sbjct: 3 EDSSALPWSINRDDYELQEVIGSGATAVVQAAYCA------PKKEKVAIKRINLEKCQTS 56
Query: 529 KKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGS----LDKWIFNSTEESR 584
E E+ + HH ++V + L + L GS + + +S
Sbjct: 57 MDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSG 116
Query: 585 FLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM-- 642
L +T I + +GL YLH+ ++ H D+K N+LL ++ + +++DFG++ +
Sbjct: 117 VLDESTIATILREVLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLAT 173
Query: 643 --NREESLVYTTLRGTRGYLAPEWITN-NPISEKSDVYSY 679
+ + V T GT ++APE + K+D++S+
Sbjct: 174 GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSF 213
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 20/180 (11%)
Query: 497 KLGQGGFGSVYLGMLPD-GIQVAVKK-LESIGQG--KKEFSAEVTTIGNVHHLHLVKLKG 552
K+G+G +G V+ D G VA+KK LES KK E+ + + H +LV L
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 553 FCIEGAHRLLAYEYLGN---GSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAYLHEE 608
L +EY + LD++ E + ++W T + + + H+
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQT--------LQAVNFCHKH 121
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNN 668
+H D+KPEN+L+ + K+ DFG A+L+ S Y TR Y +PE + +
Sbjct: 122 ---NCIHRDVKPENILITKHSVIKLCDFGFARLLT-GPSDYYDDEVATRWYRSPELLVGD 177
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G +VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 24 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 82
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 83 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 139
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E + TR Y APE + N
Sbjct: 140 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA----GFVATRWYRAPEIMLN 192
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 476 SGMPTRFSYDD--LCKATKNFSTKLGQGGFGSVYLGMLPDGIQVAVKK--LESIGQGKKE 531
S +P + DD L + + +T + Q + + P +VA+K+ LE E
Sbjct: 1 SALPWSINRDDYELQEVIGSGATAVVQAAYCA------PKKEKVAIKRINLEKCQTSMDE 54
Query: 532 FSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGS----LDKWIFNSTEESRFLS 587
E+ + HH ++V + L + L GS + + +S L
Sbjct: 55 LLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLD 114
Query: 588 WNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM----N 643
+T I + +GL YLH+ ++ H D+K N+LL ++ + +++DFG++ + +
Sbjct: 115 ESTIATILREVLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLATGGD 171
Query: 644 REESLVYTTLRGTRGYLAPEWITN-NPISEKSDVYSY 679
+ V T GT ++APE + K+D++S+
Sbjct: 172 ITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSF 208
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 101
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLXGTPEYLAPEI 209
Query: 665 I 665
I
Sbjct: 210 I 210
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 13/159 (8%)
Query: 525 IGQGKKEFSAEVTTIGNV-HHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEES 583
I + K++ + E+ + H +++ LK +G + + E + G L +
Sbjct: 55 IDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGEL----LDKILRQ 110
Query: 584 RFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNF----TAKVSDFGLA 639
+F S + + K + YLH + +VH D+KP N+L D + ++ DFG A
Sbjct: 111 KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFA 167
Query: 640 KLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
K + E L+ T T ++APE + D++S
Sbjct: 168 KQLRAENGLLMTPCY-TANFVAPEVLERQGYDAACDIWS 205
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G +VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E TR Y APE + N
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MAGFVATRWYRAPEIMLN 196
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G +VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E TR Y APE + N
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MAGFVATRWYRAPEIMLN 196
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ D GLA+ + E T TR Y APE + N
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE----MTGYVATRWYRAPEIMLN 196
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 469 DNFLEKISGMPTRFSYDDLCKATKNFSTK--LGQGGFGSVYLGMLPDGIQV-AVKKLESI 525
DNFL + + DL +++ +G+G FG V L +V A+K L
Sbjct: 48 DNFLSRYKDTINKIR--DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKF 105
Query: 526 GQGKKEFSA----EVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTE 581
K+ SA E + + +V+L + + + EY+ G L + N
Sbjct: 106 EMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV 165
Query: 582 ESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKL 641
++ RF A + L +H + +H D+KP+N+LLD + K++DFG
Sbjct: 166 PEKW----ARFYTA-EVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 217
Query: 642 MNREESLVYTTLRGTRGYLAPE 663
MN+E + T GT Y++PE
Sbjct: 218 MNKEGMVRCDTAVGTPDYISPE 239
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ FGLA+ + E T TR Y APE + N
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE----MTGYVATRWYRAPEIMLN 196
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 59/234 (25%)
Query: 478 MPTRFSYDDLCKATKNFSTK--LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGK----- 529
MP R Y+ + +F K LG+G +G V P G VA+KK+E +
Sbjct: 1 MPKRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT 56
Query: 530 -------KEFSAE-VTTIGNVHHL-------HLVKLKGFCIEGAHRLLAYEYLGNGSLDK 574
K F E + TI N+ + ++ HR+++ + L + +
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY 116
Query: 575 WIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVS 634
+I+ + + L + ++H D+KP N+L++ N KV
Sbjct: 117 FIYQTLRAVKVLHGSN----------------------VIHRDLKPSNLLINSNCDLKVC 154
Query: 635 DFGLAKLMNRE---------ESLVYTTLRGTRGYLAPE-WITNNPISEKSDVYS 678
DFGLA++++ + T TR Y APE +T+ S DV+S
Sbjct: 155 DFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWS 208
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 16/194 (8%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
NF LG+G FG V L ++ K+ ++ E T + L L
Sbjct: 344 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEK-RVLALPGKPP 402
Query: 553 F------CIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
F C + RL EY+ G L +++ + RF + F A +A GL +L
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKEPHAVF-YAAEIAIGLFFL 458
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+ I++ D+K +NV+LD K++DFG+ K N + + GT Y+APE I
Sbjct: 459 QSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXFCGTPDYIAPEII 514
Query: 666 TNNPISEKSDVYSY 679
P + D +++
Sbjct: 515 AYQPYGKSVDWWAF 528
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ D GLA+ + E T TR Y APE + N
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE----MTGYVATRWYRAPEIMLN 196
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 101
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLAGTPEYLAPEI 209
Query: 665 I 665
I
Sbjct: 210 I 210
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 59/234 (25%)
Query: 478 MPTRFSYDDLCKATKNFSTK--LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGK----- 529
MP R Y+ + +F K LG+G +G V P G VA+KK+E +
Sbjct: 1 MPKRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT 56
Query: 530 -------KEFSAE-VTTIGNVHHL-------HLVKLKGFCIEGAHRLLAYEYLGNGSLDK 574
K F E + TI N+ + ++ HR+++ + L + +
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY 116
Query: 575 WIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVS 634
+I+ + + L + ++H D+KP N+L++ N KV
Sbjct: 117 FIYQTLRAVKVLHGSN----------------------VIHRDLKPSNLLINSNCDLKVC 154
Query: 635 DFGLAKLMNRE---------ESLVYTTLRGTRGYLAPE-WITNNPISEKSDVYS 678
DFGLA++++ + T TR Y APE +T+ S DV+S
Sbjct: 155 DFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWS 208
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 13/186 (6%)
Query: 498 LGQGGFGSVYLGMLPDGIQV-----AVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
LG+GGF + D +V K L +++ S E++ ++ H H+V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
F + + E SL + R+ + + G YLH +
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLR-QIVLGCQYLHRN---R 137
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISE 672
++H D+K N+ L+++ K+ DFGLA + + TL GT Y+APE ++ S
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKTLCGTPNYIAPEVLSKKGHSF 196
Query: 673 KSDVYS 678
+ DV+S
Sbjct: 197 EVDVWS 202
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFS--AEVTTIGNVHHLHLVKLK--- 551
LG GGFGSVY G+ + D + VA+K +E K S E+ G + +V LK
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVE-----KDRISDWGELPN-GTRVPMEVVLLKKVS 70
Query: 552 -GFCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
GF G RLL + L + +F+ E L + + + +
Sbjct: 71 SGFS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 128
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
+ H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y
Sbjct: 129 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSP 182
Query: 662 PEWI 665
PEWI
Sbjct: 183 PEWI 186
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 13/186 (6%)
Query: 498 LGQGGFGSVYLGMLPDGIQV-----AVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
LG+GGF + D +V K L +++ S E++ ++ H H+V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
F + + E SL + R+ + + G YLH +
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLR-QIVLGCQYLHRN---R 137
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISE 672
++H D+K N+ L+++ K+ DFGLA + + TL GT Y+APE ++ S
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKTLCGTPNYIAPEVLSKKGHSF 196
Query: 673 KSDVYS 678
+ DV+S
Sbjct: 197 EVDVWS 202
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 469 DNFLEKISGMPTRFSYDDLCKATKNFSTK--LGQGGFGSVYLGMLPDGIQV-AVKKLESI 525
DNFL + + DL +++ +G+G FG V L +V A+K L
Sbjct: 53 DNFLSRYKDTINKIR--DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKF 110
Query: 526 GQGKKEFSA----EVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTE 581
K+ SA E + + +V+L + + + EY+ G L + N
Sbjct: 111 EMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV 170
Query: 582 ESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKL 641
++ RF A + L +H + +H D+KP+N+LLD + K++DFG
Sbjct: 171 PEKW----ARFYTA-EVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 222
Query: 642 MNREESLVYTTLRGTRGYLAPE 663
MN+E + T GT Y++PE
Sbjct: 223 MNKEGMVRCDTAVGTPDYISPE 244
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 498 LGQGGFGSVYLGMLPDGIQV-----AVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
LG+GGF Y D +V K + K++ S E+ ++ + H+V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 553 FCIEGAHRLLAYEYLGNGSL----DKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
F + + E SL + + E+R+ T +G+ YLH
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT--------IQGVQYLHNN 145
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM----NREESLVYTTLRGTRGYLAPEW 664
+++H D+K N+ L+D+ K+ DFGLA + R++ L GT Y+APE
Sbjct: 146 ---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC-----GTPNYIAPEV 197
Query: 665 ITNNPISEKSDVYS 678
+ S + D++S
Sbjct: 198 LCKKGHSFEVDIWS 211
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFS--AEVTTIGNVHHLHLVKLK--- 551
LG GGFGSVY G+ + D + VA+K +E K S E+ G + +V LK
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVE-----KDRISDWGELPN-GTRVPMEVVLLKKVS 84
Query: 552 -GFCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
GF G RLL + L + +F+ E L + + + +
Sbjct: 85 SGFS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 142
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
+ H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y
Sbjct: 143 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSP 196
Query: 662 PEWI 665
PEWI
Sbjct: 197 PEWI 200
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFS--AEVTTIGNVHHLHLVKLK--- 551
LG GGFGSVY G+ + D + VA+K +E K S E+ G + +V LK
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVE-----KDRISDWGELPN-GTRVPMEVVLLKKVS 85
Query: 552 -GFCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
GF G RLL + L + +F+ E L + + + +
Sbjct: 86 SGFS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 143
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
+ H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y
Sbjct: 144 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSP 197
Query: 662 PEWI 665
PEWI
Sbjct: 198 PEWI 201
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 16/194 (8%)
Query: 493 NFSTKLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
NF LG+G FG V L ++ K+ ++ E T + L L
Sbjct: 23 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEK-RVLALPGKPP 81
Query: 553 F------CIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYL 605
F C + RL EY+ G L +++ + RF + F A +A GL +L
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQVGRFKEPHAVF-YAAEIAIGLFFL 137
Query: 606 HEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+ I++ D+K +NV+LD K++DFG+ K N + + GT Y+APE I
Sbjct: 138 QSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXFCGTPDYIAPEII 193
Query: 666 TNNPISEKSDVYSY 679
P + D +++
Sbjct: 194 AYQPYGKSVDWWAF 207
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 13/186 (6%)
Query: 498 LGQGGFGSVYLGMLPDGIQV-----AVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
LG+GGF + D +V K L +++ S E++ ++ H H+V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
F + + E SL + R+ + + G YLH +
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLR-QIVLGCQYLHRN---R 141
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISE 672
++H D+K N+ L+++ K+ DFGLA + + TL GT Y+APE ++ S
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKTLCGTPNYIAPEVLSKKGHSF 200
Query: 673 KSDVYS 678
+ DV+S
Sbjct: 201 EVDVWS 206
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 498 LGQGGFGSVYLGMLPDGIQV-----AVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
LG+GGF Y D +V K + K++ S E+ ++ + H+V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 553 FCIEGAHRLLAYEYLGNGSL----DKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
F + + E SL + + E+R+ T +G+ YLH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT--------IQGVQYLHNN 161
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM----NREESLVYTTLRGTRGYLAPEW 664
+++H D+K N+ L+D+ K+ DFGLA + R++ L GT Y+APE
Sbjct: 162 ---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC-----GTPNYIAPEV 213
Query: 665 ITNNPISEKSDVYS 678
+ S + D++S
Sbjct: 214 LCKKGHSFEVDIWS 227
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 469 DNFLEKISGMPTRFSYDDLCKATKNFSTK--LGQGGFGSVYLGMLPDGIQV-AVKKLESI 525
DNFL + + DL +++ +G+G FG V L +V A+K L
Sbjct: 53 DNFLSRYKDTINKIR--DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKF 110
Query: 526 GQGKKEFSA----EVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTE 581
K+ SA E + + +V+L + + + EY+ G L + N
Sbjct: 111 EMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV 170
Query: 582 ESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKL 641
++ RF A + L +H + +H D+KP+N+LLD + K++DFG
Sbjct: 171 PEKW----ARFYTA-EVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 222
Query: 642 MNREESLVYTTLRGTRGYLAPE 663
MN+E + T GT Y++PE
Sbjct: 223 MNKEGMVRCDTAVGTPDYISPE 244
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFS--AEVTTIGNVHHLHLVKLK--- 551
LG GGFGSVY G+ + D + VA+K +E K S E+ G + +V LK
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVE-----KDRISDWGELPN-GTRVPMEVVLLKKVS 97
Query: 552 -GFCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
GF G RLL + L + +F+ E L + + + +
Sbjct: 98 SGFS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 155
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
+ H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y
Sbjct: 156 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSP 209
Query: 662 PEWI 665
PEWI
Sbjct: 210 PEWI 213
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR
Sbjct: 128 MLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG--TSFMMTPYVVTR 182
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 183 YYRAPEVILGMGYKENVDIWS 203
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 88
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 89 FLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEY 143
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D+ +V+DFG AK R + + L GT YLAPE
Sbjct: 144 LHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 196
Query: 665 I 665
I
Sbjct: 197 I 197
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFS--AEVTTIGNVHHLHLVKLK--- 551
LG GGFGSVY G+ + D + VA+K +E K S E+ G + +V LK
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVE-----KDRISDWGELPN-GTRVPMEVVLLKKVS 112
Query: 552 -GFCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
GF G RLL + L + +F+ E L + + + +
Sbjct: 113 SGFS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 170
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
+ H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y
Sbjct: 171 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSP 224
Query: 662 PEWI 665
PEWI
Sbjct: 225 PEWI 228
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFS--AEVTTIGNVHHLHLVKLK--- 551
LG GGFGSVY G+ + D + VA+K +E K S E+ G + +V LK
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVE-----KDRISDWGELPN-GTRVPMEVVLLKKVS 69
Query: 552 -GFCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
GF G RLL + L + +F+ E L + + + +
Sbjct: 70 SGFS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 127
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
+ H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y
Sbjct: 128 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSP 181
Query: 662 PEWI 665
PEWI
Sbjct: 182 PEWI 185
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFS--AEVTTIGNVHHLHLVKLK--- 551
LG GGFGSVY G+ + D + VA+K +E K S E+ G + +V LK
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVE-----KDRISDWGELPN-GTRVPMEVVLLKKVS 98
Query: 552 -GFCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
GF G RLL + L + +F+ E L + + + +
Sbjct: 99 SGFS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 156
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
+ H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y
Sbjct: 157 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSP 210
Query: 662 PEWI 665
PEWI
Sbjct: 211 PEWI 214
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFS--AEVTTIGNVHHLHLVKLK--- 551
LG GGFGSVY G+ + D + VA+K +E K S E+ G + +V LK
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVE-----KDRISDWGELPN-GTRVPMEVVLLKKVS 84
Query: 552 -GFCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
GF G RLL + L + +F+ E L + + + +
Sbjct: 85 SGFS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 142
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
+ H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y
Sbjct: 143 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSP 196
Query: 662 PEWI 665
PEWI
Sbjct: 197 PEWI 200
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFS--AEVTTIGNVHHLHLVKLK--- 551
LG GGFGSVY G+ + D + VA+K +E K S E+ G + +V LK
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVE-----KDRISDWGELPN-GTRVPMEVVLLKKVS 98
Query: 552 -GFCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
GF G RLL + L + +F+ E L + + + +
Sbjct: 99 SGFS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 156
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
+ H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y
Sbjct: 157 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSP 210
Query: 662 PEWI 665
PEWI
Sbjct: 211 PEWI 214
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 101
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARF-YAAQIVLTFEY 156
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 209
Query: 665 I 665
I
Sbjct: 210 I 210
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR
Sbjct: 135 MLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG--TSFMMTPYVVTR 189
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 190 YYRAPEVILGMGYKENVDIWS 210
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR
Sbjct: 135 MLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG--TSFMMTPYVVTR 189
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 190 YYRAPEVILGMGYKENVDIWS 210
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFS--AEVTTIGNVHHLHLVKLK--- 551
LG GGFGSVY G+ + D + VA+K +E K S E+ G + +V LK
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVE-----KDRISDWGELPN-GTRVPMEVVLLKKVS 70
Query: 552 -GFCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
GF G RLL + L + +F+ E L + + + +
Sbjct: 71 SGFS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 128
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
+ H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y
Sbjct: 129 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSP 182
Query: 662 PEWI 665
PEWI
Sbjct: 183 PEWI 186
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFS--AEVTTIGNVHHLHLVKLK--- 551
LG GGFGSVY G+ + D + VA+K +E K S E+ G + +V LK
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVE-----KDRISDWGELPN-GTRVPMEVVLLKKVS 85
Query: 552 -GFCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
GF G RLL + L + +F+ E L + + + +
Sbjct: 86 SGFS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 143
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
+ H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y
Sbjct: 144 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSP 197
Query: 662 PEWI 665
PEWI
Sbjct: 198 PEWI 201
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFS--AEVTTIGNVHHLHLVKLK--- 551
LG GGFGSVY G+ + D + VA+K +E K S E+ G + +V LK
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVE-----KDRISDWGELPN-GTRVPMEVVLLKKVS 98
Query: 552 -GFCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
GF G RLL + L + +F+ E L + + + +
Sbjct: 99 SGFS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 156
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
+ H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y
Sbjct: 157 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSP 210
Query: 662 PEWI 665
PEWI
Sbjct: 211 PEWI 214
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 92/213 (43%), Gaps = 43/213 (20%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLE----SIGQGKKEFSAEVTTIGNVHHLHLVKLKGF 553
LG G G+V G VAVK++ I + + E NV ++ +
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNV-------IRYY 75
Query: 554 CIEGAHRLL--AYEYLGNGSLDKWIFNSTEESRFLSWNTRFN-IAL--GMAKGLAYLHEE 608
C E R L A E L N +L + + L +N I+L +A G+A+LH
Sbjct: 76 CSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS- 133
Query: 609 CEVKIVHCDIKPENVLLD-------------DNFTAKVSDFGLAKLMNREESLVYTTLR- 654
+KI+H D+KP+N+L+ +N +SDFGL K ++ +S T L
Sbjct: 134 --LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNN 191
Query: 655 --GTRGYLAPEWI-------TNNPISEKSDVYS 678
GT G+ APE + T ++ D++S
Sbjct: 192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFS 224
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFS--AEVTTIGNVHHLHLVKLK--- 551
LG GGFGSVY G+ + D + VA+K +E K S E+ G + +V LK
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVE-----KDRISDWGELPN-GTRVPMEVVLLKKVS 97
Query: 552 -GFCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
GF G RLL + L + +F+ E L + + + +
Sbjct: 98 SGFS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 155
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
+ H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y
Sbjct: 156 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSP 209
Query: 662 PEWI 665
PEWI
Sbjct: 210 PEWI 213
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 81/174 (46%), Gaps = 18/174 (10%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLESIGQGK-KEFSA---EVTTIGNVHHLHLVKLKG 552
LG G FG V L + G A+K L+ K KE E + V+ LVKL+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ ++ + EY G + F+ RF + RF A + YLH +
Sbjct: 109 SFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---L 160
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+++ D+KPEN+++D +V+DFGLAK R + + L GT YLAPE I
Sbjct: 161 DLIYRDLKPENLMIDQQGYIQVTDFGLAK---RVKGRTW-XLCGTPEYLAPEII 210
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFS--AEVTTIGNVHHLHLVKLK--- 551
LG GGFGSVY G+ + D + VA+K +E K S E+ G + +V LK
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVE-----KDRISDWGELPN-GTRVPMEVVLLKKVS 85
Query: 552 -GFCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
GF G RLL + L + +F+ E L + + + +
Sbjct: 86 SGFS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 143
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
+ H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y
Sbjct: 144 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSP 197
Query: 662 PEWI 665
PEWI
Sbjct: 198 PEWI 201
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 18/174 (10%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLESIGQGK-KEFSA---EVTTIGNVHHLHLVKLKG 552
+G G FG V L + G A+K L+ K K+ E + V+ LVKL+
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ ++ + EY+ G + F+ RF + RF A + YLH +
Sbjct: 109 SFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---L 160
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+++ D+KPEN+L+D KV+DFG AK R + + L GT YLAPE I
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAK---RVKGRTW-XLCGTPEYLAPEII 210
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFS--AEVTTIGNVHHLHLVKLK--- 551
LG GGFGSVY G+ + D + VA+K +E K S E+ G + +V LK
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVE-----KDRISDWGELPN-GTRVPMEVVLLKKVS 104
Query: 552 -GFCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
GF G RLL + L + +F+ E L + + + +
Sbjct: 105 SGFS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 162
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
+ H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y
Sbjct: 163 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSP 216
Query: 662 PEWI 665
PEWI
Sbjct: 217 PEWI 220
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFS--AEVTTIGNVHHLHLVKLK--- 551
LG GGFGSVY G+ + D + VA+K +E K S E+ G + +V LK
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVE-----KDRISDWGELPN-GTRVPMEVVLLKKVS 97
Query: 552 -GFCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
GF G RLL + L + +F+ E L + + + +
Sbjct: 98 SGFS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 155
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
+ H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y
Sbjct: 156 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSP 209
Query: 662 PEWI 665
PEWI
Sbjct: 210 PEWI 213
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 96
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 97 FLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARF-YAAQIVLTFEY 151
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE
Sbjct: 152 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 204
Query: 665 I 665
I
Sbjct: 205 I 205
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 498 LGQGGFGSVYLGMLPDGIQV-----AVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
LG+GGF Y D +V K + K++ S E+ ++ + H+V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 553 FCIEGAHRLLAYEYLGNGSL----DKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
F + + E SL + + E+R+ T +G+ YLH
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT--------IQGVQYLHNN 161
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM----NREESLVYTTLRGTRGYLAPEW 664
+++H D+K N+ L+D+ K+ DFGLA + R++ L GT Y+APE
Sbjct: 162 ---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLC-----GTPNYIAPEV 213
Query: 665 ITNNPISEKSDVYS 678
+ S + D++S
Sbjct: 214 LCKKGHSFEVDIWS 227
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFS--AEVTTIGNVHHLHLVKLK--- 551
LG GGFGSVY G+ + D + VA+K +E K S E+ G + +V LK
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVE-----KDRISDWGELPN-GTRVPMEVVLLKKVS 98
Query: 552 -GFCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
GF G RLL + L + +F+ E L + + + +
Sbjct: 99 SGFS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 156
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
+ H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y
Sbjct: 157 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSP 210
Query: 662 PEWI 665
PEWI
Sbjct: 211 PEWI 214
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFS--AEVTTIGNVHHLHLVKLK--- 551
LG GGFGSVY G+ + D + VA+K +E K S E+ G + +V LK
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVE-----KDRISDWGELPN-GTRVPMEVVLLKKVS 112
Query: 552 -GFCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
GF G RLL + L + +F+ E L + + + +
Sbjct: 113 SGFS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 170
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
+ H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y
Sbjct: 171 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSP 224
Query: 662 PEWI 665
PEWI
Sbjct: 225 PEWI 228
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 82/182 (45%), Gaps = 26/182 (14%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLK----G 552
LG GGFGSVY G+ + D + VA+K +E + + E+ G + +V LK G
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPN-GTRVPMEVVLLKKVSSG 67
Query: 553 FCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAY 604
F G RLL + L + +F+ E L + + + + +
Sbjct: 68 FS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 605 LHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y PE
Sbjct: 126 CHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 179
Query: 664 WI 665
WI
Sbjct: 180 WI 181
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 33/185 (17%)
Query: 498 LGQGGFGSV---YLGMLPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+G G +GSV Y L +VAVKKL +S+ ++ + E+ + ++ H +++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 92
Query: 551 -----KGFCIEGAHRLLAYEYLGNGSLDKWI---FNSTEESRFLSWNTRFNIALGMAKGL 602
IE + L L+ + S E +FL + + +GL
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQ--------LLRGL 144
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAP 662
Y+H I+H D+KP NV ++++ ++ DFGLA+ + E T TR Y AP
Sbjct: 145 KYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYVATRWYRAP 197
Query: 663 EWITN 667
E + N
Sbjct: 198 EIMLN 202
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 18/174 (10%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLESIGQGK-KEFSA---EVTTIGNVHHLHLVKLKG 552
+G G FG V L + G A+K L+ K K+ E + V+ LVKL+
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ ++ + EY+ G + F+ RF + RF A + YLH +
Sbjct: 109 SFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---L 160
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+++ D+KPEN+L+D KV+DFG AK R + + L GT YLAPE I
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAK---RVKGRTW-XLCGTPEYLAPEII 210
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFS--AEVTTIGNVHHLHLVKLK--- 551
LG GGFGSVY G+ + D + VA+K +E K S E+ G + +V LK
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVE-----KDRISDWGELPN-GTRVPMEVVLLKKVS 97
Query: 552 -GFCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
GF G RLL + L + +F+ E L + + + +
Sbjct: 98 SGFS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 155
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
+ H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y
Sbjct: 156 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSP 209
Query: 662 PEWI 665
PEWI
Sbjct: 210 PEWI 213
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFS--AEVTTIGNVHHLHLVKLK--- 551
LG GGFGSVY G+ + D + VA+K +E K S E+ G + +V LK
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVE-----KDRISDWGELPN-GTRVPMEVVLLKKVS 70
Query: 552 -GFCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
GF G RLL + L + +F+ E L + + + +
Sbjct: 71 SGFS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 128
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
+ H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y
Sbjct: 129 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSP 182
Query: 662 PEWI 665
PEWI
Sbjct: 183 PEWI 186
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 101
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARF-YAAQIVLTFEY 156
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 209
Query: 665 I 665
I
Sbjct: 210 I 210
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 82/182 (45%), Gaps = 26/182 (14%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLK----G 552
LG GGFGSVY G+ + D + VA+K +E + + E+ G + +V LK G
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPN-GTRVPMEVVLLKKVSSG 70
Query: 553 FCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAY 604
F G RLL + L + +F+ E L + + + + +
Sbjct: 71 FS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 128
Query: 605 LHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y PE
Sbjct: 129 CHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 182
Query: 664 WI 665
WI
Sbjct: 183 WI 184
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 33/185 (17%)
Query: 498 LGQGGFGSV---YLGMLPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+G G +GSV Y L +VAVKKL +S+ ++ + E+ + ++ H +++ L
Sbjct: 28 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 84
Query: 551 -----KGFCIEGAHRLLAYEYLGNGSLDKWI---FNSTEESRFLSWNTRFNIALGMAKGL 602
IE + L L+ + S E +FL + + +GL
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQ--------LLRGL 136
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAP 662
Y+H I+H D+KP NV ++++ ++ DFGLA+ + E T TR Y AP
Sbjct: 137 KYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE----MTGYVATRWYRAP 189
Query: 663 EWITN 667
E + N
Sbjct: 190 EIMLN 194
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%)
Query: 514 GIQVAVKKLESIGQGK---KEFSAEVTTIGNVHHLHLVKLKGF-----CIEGAHRLLAYE 565
GI VAVKKL Q + K E+ + V+H +++ L +E +
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 106
Query: 566 YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLL 625
L + +L + I + R +S+ + M G+ +LH I+H D+KP N+++
Sbjct: 107 ELMDANLCQVIHMELDHER-MSY-----LLYQMLCGIKHLHS---AGIIHRDLKPSNIVV 157
Query: 626 DDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
+ T K+ DFGLA+ + + + T TR Y APE I E D++S
Sbjct: 158 KSDCTLKILDFGLARTAST--NFMMTPYVVTRYYRAPEVILGMGYKENVDIWS 208
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 101
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARF-YAAQIVLTFEY 156
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 209
Query: 665 I 665
I
Sbjct: 210 I 210
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 16/196 (8%)
Query: 492 KNFSTKLGQ-GGFGSVYLGMLPD-GIQVAVKKLESIGQGK-KEFSAEVTTIGNVHHLHLV 548
++F +G+ G FG VY + + A K +++ + + +++ E+ + + H ++V
Sbjct: 11 EDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 70
Query: 549 KL-KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHE 607
KL F E +L E+ G++D + E R L+ + + L YLH+
Sbjct: 71 KLLDAFYYENNLWIL-IEFCAGGAVDAVML---ELERPLTESQIQVVCKQTLDALNYLHD 126
Query: 608 ECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWIT- 666
KI+H D+K N+L + K++DFG++ R + GT ++APE +
Sbjct: 127 N---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMC 183
Query: 667 ----NNPISEKSDVYS 678
+ P K+DV+S
Sbjct: 184 ETSKDRPYDYKADVWS 199
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G++VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ D GLA+ + E T TR Y APE + N
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE----MTGYVATRWYRAPEIMLN 196
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFS--AEVTTIGNVHHLHLVKLK--- 551
LG GGFGSVY G+ + D + VA+K +E K S E+ G + +V LK
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVE-----KDRISDWGELPN-GTRVPMEVVLLKKVS 117
Query: 552 -GFCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
GF G RLL + L + +F+ E L + + + +
Sbjct: 118 SGFS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 175
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
+ H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y
Sbjct: 176 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSP 229
Query: 662 PEWI 665
PEWI
Sbjct: 230 PEWI 233
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 82/182 (45%), Gaps = 26/182 (14%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLK----G 552
LG GGFGSVY G+ + D + VA+K +E + + E+ G + +V LK G
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPN-GTRVPMEVVLLKKVSSG 67
Query: 553 FCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAY 604
F G RLL + L + +F+ E L + + + + +
Sbjct: 68 FS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 605 LHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y PE
Sbjct: 126 CHN---XGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 179
Query: 664 WI 665
WI
Sbjct: 180 WI 181
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 101
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFAEPHARF-YAAQIVLTFEY 156
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 209
Query: 665 I 665
I
Sbjct: 210 I 210
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 38/206 (18%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEG 557
+G+G FG V+ G G +VAVK S + AE+ + H +++ GF
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENIL---GFIAAD 67
Query: 558 -------AHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC- 609
L +Y +GSL ++ T ++ +AL A GLA+LH E
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIV 122
Query: 610 ----EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT------LRGTRGY 659
+ I H D+K +N+L+ N T ++D GLA R +S T GT+ Y
Sbjct: 123 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV---RHDSATDTIDIAPNHRVGTKRY 179
Query: 660 LAPEWITNNPIS-------EKSDVYS 678
+APE + ++ I+ +++D+Y+
Sbjct: 180 MAPE-VLDDSINMKHFESFKRADIYA 204
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 82/182 (45%), Gaps = 26/182 (14%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLK----G 552
LG GGFGSVY G+ + D + VA+K +E + + E+ G + +V LK G
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPN-GTRVPMEVVLLKKVSSG 67
Query: 553 FCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAY 604
F G RLL + L + +F+ E L + + + + +
Sbjct: 68 FS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 605 LHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y PE
Sbjct: 126 CHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 179
Query: 664 WI 665
WI
Sbjct: 180 WI 181
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFS--AEVTTIGNVHHLHLVKLK--- 551
LG GGFGSVY G+ + D + VA+K +E K S E+ G + +V LK
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVE-----KDRISDWGELPN-GTRVPMEVVLLKKVS 92
Query: 552 -GFCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
GF G RLL + L + +F+ E L + + + +
Sbjct: 93 SGFS--GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 150
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
+ H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y
Sbjct: 151 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSP 204
Query: 662 PEWI 665
PEWI
Sbjct: 205 PEWI 208
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 18/174 (10%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLESIGQGK-KEFSA---EVTTIGNVHHLHLVKLKG 552
LG G FG V L + G A+K L+ K K+ E + V+ LVKL+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ ++ + EY+ G + F+ RF + RF A + YLH +
Sbjct: 110 SFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS---L 161
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE I
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEII 211
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 18/174 (10%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLESIGQGK-KEFSA---EVTTIGNVHHLHLVKLKG 552
LG G FG V L + G A+K L+ K K+ E + V+ LVKL+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ ++ + EY+ G + F+ RF + RF A + YLH +
Sbjct: 109 SFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---L 160
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE I
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEII 210
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 18/174 (10%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLESIGQGK-KEFSA---EVTTIGNVHHLHLVKLKG 552
LG G FG V L + G A+K L+ K K+ E + V+ LVKL+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ ++ + EY+ G + F+ RF + RF A + YLH +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS---L 160
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE I
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEII 210
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 18/174 (10%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLESIGQGK-KEFSA---EVTTIGNVHHLHLVKLKG 552
LG G FG V L + G A+K L+ K K+ E + V+ LVKL+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ ++ + EY+ G + F+ RF + RF A + YLH +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS---L 160
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE I
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEII 210
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 122
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARF-YAAQIVLTFEY 177
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE
Sbjct: 178 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 230
Query: 665 I 665
I
Sbjct: 231 I 231
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 30/184 (16%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFS--AEVTTIGNVHHLHLVKLK--- 551
LG GGFGSVY G+ + D + VA+K +E K S E+ G + +V LK
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVE-----KDRISDWGELPN-GTRVPMEVVLLKKVS 69
Query: 552 -GFCIEGAHRLLAY--------EYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
GF G RLL + L + +F+ E L + + + +
Sbjct: 70 SGFS--GVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAV 127
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
+ H ++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y
Sbjct: 128 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSP 181
Query: 662 PEWI 665
PEWI
Sbjct: 182 PEWI 185
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G +VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 48 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 106
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 107 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 163
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DFGLA+ + E TR Y APE + N
Sbjct: 164 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MXGXVATRWYRAPEIMLN 216
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 38/206 (18%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEG 557
+G+G FG V+ G G +VAVK S + AE+ + H +++ GF
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENIL---GFIAAD 72
Query: 558 -------AHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC- 609
L +Y +GSL ++ T ++ +AL A GLA+LH E
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIV 127
Query: 610 ----EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT------LRGTRGY 659
+ I H D+K +N+L+ N T ++D GLA R +S T GT+ Y
Sbjct: 128 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV---RHDSATDTIDIAPNHRVGTKRY 184
Query: 660 LAPEWITNNPIS-------EKSDVYS 678
+APE + ++ I+ +++D+Y+
Sbjct: 185 MAPE-VLDDSINMKHFESFKRADIYA 209
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT-TLRGT 656
+A+G+ +L K +H D+ N+LL +N K+ DFGLA+ + + V R
Sbjct: 208 VARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 657 RGYLAPEWITNNPISEKSDVYSY 679
++APE I + S KSDV+SY
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSY 287
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 16/111 (14%)
Query: 481 RFSYD----DLCKATKNFSTKLGQGGFGSVY------LGMLPDGIQVAVKKLESIGQGKK 530
R YD + + LG+G FG V + P VAVK L+ G
Sbjct: 14 RLPYDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKE-GATAS 72
Query: 531 EFSAEVTTIGNV----HHLHLVKLKGFCI-EGAHRLLAYEYLGNGSLDKWI 576
E+ A +T + + HHL++V L G C +G ++ EY G+L ++
Sbjct: 73 EYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 38/206 (18%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEG 557
+G+G FG V+ G G +VAVK S + AE+ + H +++ GF
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENIL---GFIAAD 66
Query: 558 -------AHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC- 609
L +Y +GSL ++ T ++ +AL A GLA+LH E
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIV 121
Query: 610 ----EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT------LRGTRGY 659
+ I H D+K +N+L+ N T ++D GLA R +S T GT+ Y
Sbjct: 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV---RHDSATDTIDIAPNHRVGTKRY 178
Query: 660 LAPEWITNNPIS-------EKSDVYS 678
+APE + ++ I+ +++D+Y+
Sbjct: 179 MAPE-VLDDSINMKHFESFKRADIYA 203
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 38/206 (18%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEG 557
+G+G FG V+ G G +VAVK S + AE+ + H +++ GF
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENIL---GFIAAD 69
Query: 558 -------AHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC- 609
L +Y +GSL ++ T ++ +AL A GLA+LH E
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIV 124
Query: 610 ----EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT------LRGTRGY 659
+ I H D+K +N+L+ N T ++D GLA R +S T GT+ Y
Sbjct: 125 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV---RHDSATDTIDIAPNHRVGTKRY 181
Query: 660 LAPEWITNNPIS-------EKSDVYS 678
+APE + ++ I+ +++D+Y+
Sbjct: 182 MAPE-VLDDSINMKHFESFKRADIYA 206
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 94
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 95 FLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARF-YAAQIVLTFEY 149
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE
Sbjct: 150 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 202
Query: 665 I 665
I
Sbjct: 203 I 203
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 101
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 209
Query: 665 I 665
I
Sbjct: 210 I 210
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 18/174 (10%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLESIGQGK-KEFSA---EVTTIGNVHHLHLVKLKG 552
+G G FG V L + G A+K L+ K K+ E + V+ LVKL+
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ ++ + EY+ G + F+ RF + RF A + YLH +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---L 160
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+++ D+KPEN+L+D KV+DFG AK R + + L GT YLAPE I
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAK---RVKGRTW-XLCGTPEYLAPEII 210
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR
Sbjct: 135 MLVGIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAG--TSFMMTPYVVTR 189
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 190 YYRAPEVILGMGYKENVDIWS 210
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 38/206 (18%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEG 557
+G+G FG V+ G G +VAVK S + AE+ + H +++ GF
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENIL---GFIAAD 92
Query: 558 -------AHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC- 609
L +Y +GSL ++ T ++ +AL A GLA+LH E
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIV 147
Query: 610 ----EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT------LRGTRGY 659
+ I H D+K +N+L+ N T ++D GLA R +S T GT+ Y
Sbjct: 148 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV---RHDSATDTIDIAPNHRVGTKRY 204
Query: 660 LAPEWITNNPIS-------EKSDVYS 678
+APE + ++ I+ +++D+Y+
Sbjct: 205 MAPE-VLDDSINMKHFESFKRADIYA 229
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 38/206 (18%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEG 557
+G+G FG V+ G G +VAVK S + AE+ + H +++ GF
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENIL---GFIAAD 105
Query: 558 -------AHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC- 609
L +Y +GSL ++ T ++ +AL A GLA+LH E
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIV 160
Query: 610 ----EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTT------LRGTRGY 659
+ I H D+K +N+L+ N T ++D GLA R +S T GT+ Y
Sbjct: 161 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV---RHDSATDTIDIAPNHRVGTKRY 217
Query: 660 LAPEWITNNPIS-------EKSDVYS 678
+APE + ++ I+ +++D+Y+
Sbjct: 218 MAPE-VLDDSINMKHFESFKRADIYA 242
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR
Sbjct: 135 MLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG--TSFMMTPYVVTR 189
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 190 YYRAPEVILGMGYKENVDIWS 210
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 101
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 209
Query: 665 I 665
I
Sbjct: 210 I 210
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR
Sbjct: 135 MLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG--TSFMMTPYVVTR 189
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 190 YYRAPEVILGMGYKENVDIWS 210
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 497 KLGQGGFGSVYLGMLP-DGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 72 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 125
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAK 640
++H D+KPEN+L++ K++DFGLA+
Sbjct: 126 VLHRDLKPENLLINTEGAIKLADFGLAR 153
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 102
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 210
Query: 665 I 665
I
Sbjct: 211 I 211
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 27/184 (14%)
Query: 498 LGQGGFGS-VYLGMLPDGIQVAVKKLE----SIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
LG G G+ VY GM D VAVK++ S + + E NV ++
Sbjct: 32 LGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFADREVQLLRESDEHPNV-------IRY 83
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTR-FNIALGMAKGLAYLHEECEV 611
FC E + ++Y+ + E+ F + GLA+LH +
Sbjct: 84 FCTEKDRQ---FQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS---L 137
Query: 612 KIVHCDIKPENVLLD-----DNFTAKVSDFGLAKLM--NREESLVYTTLRGTRGYLAPEW 664
IVH D+KP N+L+ A +SDFGL K + R + + GT G++APE
Sbjct: 138 NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEM 197
Query: 665 ITNN 668
++ +
Sbjct: 198 LSED 201
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 43/213 (20%)
Query: 496 TKLGQGGFGSVY--LGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGF 553
+ LG+G FG V + G +VA+K ++++ + K+ E+ + ++ K
Sbjct: 39 STLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDN-KNL 97
Query: 554 CIE-------GAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTR--FNIALGMAKGLAY 604
C++ H +++E LG + F+ +++ +L + ++A + + + +
Sbjct: 98 CVQMFDWFDYHGHMCISFELLGLST-----FDFLKDNNYLPYPIHQVRHMAFQLCQAVKF 152
Query: 605 LHEECEVKIVHCDIKPENVLL---DDNFT----------------AKVSDFGLAKLMNRE 645
LH+ K+ H D+KPEN+L D T +V DFG A +
Sbjct: 153 LHDN---KLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEH 209
Query: 646 ESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
S T+ TR Y APE I S+ DV+S
Sbjct: 210 HS----TIVSTRHYRAPEVILELGWSQPCDVWS 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 18/174 (10%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLESIGQGK-KEFSA---EVTTIGNVHHLHLVKLKG 552
LG G FG V L + G A+K L+ K K+ E + V+ LVKL+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ ++ + EY G + F+ RF + RF A + YLH +
Sbjct: 109 SFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS---L 160
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+++ D+KPEN+++D KV+DFG AK R + + L GT YLAPE I
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGFAK---RVKGRTW-XLCGTPEYLAPEII 210
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 101
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 209
Query: 665 I 665
I
Sbjct: 210 I 210
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 92/234 (39%), Gaps = 59/234 (25%)
Query: 478 MPTRFSYDDLCKATKNFSTK--LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGK----- 529
MP R Y+ + +F K LG+G +G V P G VA+KK+E +
Sbjct: 1 MPKRIVYN----ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT 56
Query: 530 -------KEFSAE-VTTIGNVHHL-------HLVKLKGFCIEGAHRLLAYEYLGNGSLDK 574
K F E + TI N+ + ++ HR+++ + L + +
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY 116
Query: 575 WIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVS 634
+I+ + + L + ++H D+KP N+L++ N KV
Sbjct: 117 FIYQTLRAVKVLHGSN----------------------VIHRDLKPSNLLINSNCDLKVC 154
Query: 635 DFGLAKLMNRE---------ESLVYTTLRGTRGYLAPE-WITNNPISEKSDVYS 678
DFGLA++++ + TR Y APE +T+ S DV+S
Sbjct: 155 DFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWS 208
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 101
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 209
Query: 665 I 665
I
Sbjct: 210 I 210
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 525 IGQGKKEFSAEVTTIGNV-HHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEES 583
I + K++ + E+ + H +++ LK +G + + E G L +
Sbjct: 55 IDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGEL----LDKILRQ 110
Query: 584 RFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNF----TAKVSDFGLA 639
+F S + + K + YLH + +VH D+KP N+L D + ++ DFG A
Sbjct: 111 KFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFA 167
Query: 640 KLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
K + E L+ T T ++APE + D++S
Sbjct: 168 KQLRAENGLLXTPCY-TANFVAPEVLERQGYDAACDIWS 205
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 101
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 209
Query: 665 I 665
I
Sbjct: 210 I 210
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 22/192 (11%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSA-------EVTTIGNVHHLHLVK 549
KLG G +G V L D + A + ++ I + ++ EV + + H +++K
Sbjct: 28 KLGSGAYGEVLL--CKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 85
Query: 550 LKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC 609
L F + + L E G L F+ + S I + G YLH+
Sbjct: 86 LYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH- 140
Query: 610 EVKIVHCDIKPENVLLDD---NFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWIT 666
IVH D+KPEN+LL+ + K+ DFGL+ + E GT Y+APE +
Sbjct: 141 --NIVHRDLKPENLLLESKSRDALIKIVDFGLS--AHFEVGGKMKERLGTAYYIAPE-VL 195
Query: 667 NNPISEKSDVYS 678
EK DV+S
Sbjct: 196 RKKYDEKCDVWS 207
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 497 KLGQGGFGSVYLGMLP-DGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 71 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 124
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAK 640
++H D+KPEN+L++ K++DFGLA+
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 90/210 (42%), Gaps = 43/210 (20%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFSA----EVTTIGNVHHL------ 545
KLG G F +V+L + + VA+K I +G K ++ E+ + V+
Sbjct: 26 KLGWGHFSTVWLAKDMVNNTHVAMK----IVRGDKVYTEAAEDEIKLLQRVNDADNTKED 81
Query: 546 -----HLVKL------KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNI 594
H++KL KG G H ++ +E LG L E R + I
Sbjct: 82 SMGANHILKLLDHFNHKG--PNGVHVVMVFEVLGENLL---ALIKKYEHRGIPLIYVKQI 136
Query: 595 ALGMAKGLAYLHEECEVKIVHCDIKPENVLL------DDNFTAKVSDFGLAKLMNREESL 648
+ + GL Y+H C I+H DIKPENVL+ ++ K++D G A +
Sbjct: 137 SKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH--- 191
Query: 649 VYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
YT TR Y +PE + P +D++S
Sbjct: 192 -YTNSIQTREYRSPEVLLGAPWGCGADIWS 220
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 101
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 209
Query: 665 I 665
I
Sbjct: 210 I 210
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 26/156 (16%)
Query: 497 KLGQGGFGSVYLGMLP-DGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAK--------GLAY 604
L +E+L D F+ + I L + K GLA+
Sbjct: 70 VIHTENKLYLVFEFLHQDLKD-----------FMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAK 640
H +++H D+KPEN+L++ K++DFGLA+
Sbjct: 119 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLAR 151
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR
Sbjct: 135 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG--TSFMMTPYVVTR 189
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 190 YYRAPEVILGMGYKENVDIWS 210
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 90/210 (42%), Gaps = 43/210 (20%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFSA----EVTTIGNVHHL------ 545
KLG G F +V+L + + VA+K I +G K ++ E+ + V+
Sbjct: 26 KLGWGHFSTVWLAKDMVNNTHVAMK----IVRGDKVYTEAAEDEIKLLQRVNDADNTKED 81
Query: 546 -----HLVKL------KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNI 594
H++KL KG G H ++ +E LG L E R + I
Sbjct: 82 SMGANHILKLLDHFNHKG--PNGVHVVMVFEVLGENLL---ALIKKYEHRGIPLIYVKQI 136
Query: 595 ALGMAKGLAYLHEECEVKIVHCDIKPENVLL------DDNFTAKVSDFGLAKLMNREESL 648
+ + GL Y+H C I+H DIKPENVL+ ++ K++D G A +
Sbjct: 137 SKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH--- 191
Query: 649 VYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
YT TR Y +PE + P +D++S
Sbjct: 192 -YTNSIQTREYRSPEVLLGAPWGCGADIWS 220
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM---NREESLVYTTLR 654
+ +GL Y+H +++H D+KP N+L+++N K+ DFG+A+ + E T
Sbjct: 168 LLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYV 224
Query: 655 GTRGYLAPEWI 665
TR Y APE +
Sbjct: 225 ATRWYRAPELM 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 18/174 (10%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLESIGQGK-KEFSA---EVTTIGNVHHLHLVKLKG 552
LG G FG V L + G A+K L+ K K+ E + V+ LVKL+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ ++ + EY+ G + F+ RF + RF A + YLH +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---L 160
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE I
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEII 210
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 18/174 (10%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLESIGQGK-KEFSA---EVTTIGNVHHLHLVKLKG 552
LG G FG V L + G A+K L+ K K+ E + V+ LVKL+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ ++ + EY+ G + F+ RF + RF A + YLH +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---L 160
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE I
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEII 210
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLV--YTTLRG 655
+ +GL Y+H ++H D+KP N+L++ K+ DFGLA++ + E T
Sbjct: 153 ILRGLKYIHS---ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 656 TRGYLAPEWITNNPISEKS-DVYS 678
TR Y APE + N+ KS D++S
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWS 233
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 11/171 (6%)
Query: 497 KLGQGGFGSVYLGMLP-DGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 69 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 122
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
++H D+KP+N+L++ K++DFGLA+ YT T Y APE
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTLWYRAPE 172
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 18/174 (10%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLESIGQGK-KEFSA---EVTTIGNVHHLHLVKLKG 552
LG G FG V L + G A+K L+ K K+ E + V+ LVKL+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ ++ + EY+ G + F+ RF + RF A + YLH +
Sbjct: 110 SFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---L 161
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE I
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEII 211
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 24/193 (12%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSA-------EVTTIGNVHHLHLVK 549
KLG G +G V L D + A + ++ I + ++ EV + + H +++K
Sbjct: 11 KLGSGAYGEVLL--CKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 68
Query: 550 LKGFCIEGAHRLLAYE-YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
L F + + L E Y G D+ I +F + I + G YLH+
Sbjct: 69 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQ----KFSEVDAAV-IMKQVLSGTTYLHKH 123
Query: 609 CEVKIVHCDIKPENVLLDD---NFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
IVH D+KPEN+LL+ + K+ DFGL+ + E GT Y+APE +
Sbjct: 124 ---NIVHRDLKPENLLLESKSRDALIKIVDFGLS--AHFEVGGKMKERLGTAYYIAPE-V 177
Query: 666 TNNPISEKSDVYS 678
EK DV+S
Sbjct: 178 LRKKYDEKCDVWS 190
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 18/174 (10%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLESIGQGK-KEFSA---EVTTIGNVHHLHLVKLKG 552
LG G FG V L + G A+K L+ K K+ E + V+ LVKL+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ ++ + EY+ G + F+ RF + RF A + YLH +
Sbjct: 109 SFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---L 160
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE I
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEII 210
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 10/124 (8%)
Query: 543 HHLHLVKLKGFCIEGAHRLL-AYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKG 601
+H LV L C + RL EY+ G L +F+ + + + RF A ++
Sbjct: 111 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSA-EISLA 165
Query: 602 LAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
L YLHE I++ D+K +NVLLD K++D+G+ K R +T GT Y+A
Sbjct: 166 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-STFCGTPNYIA 221
Query: 662 PEWI 665
PE +
Sbjct: 222 PEIL 225
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 601 GLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYL 660
G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAG--TSFMMTPYVVTRYYR 192
Query: 661 APEWITNNPISEKSDVYS 678
APE I E D++S
Sbjct: 193 APEVILGMGYKENVDIWS 210
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 94
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 95 FLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEY 149
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE
Sbjct: 150 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 202
Query: 665 I 665
I
Sbjct: 203 I 203
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRG 655
+ +GL Y+H ++H D+KP N+LL+ K+ DFGLA++ + + + T
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 656 TRGYLAPEWITNNPISEKS-DVYS 678
TR Y APE + N+ KS D++S
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWS 213
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 11/171 (6%)
Query: 497 KLGQGGFGSVYLGMLP-DGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 71 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 124
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
++H D+KP+N+L++ K++DFGLA+ YT T Y APE
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTLWYRAPE 174
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 11/171 (6%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 77 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 130
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
++H D+KP+N+L++ K++DFGLA+ YT T Y APE
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTLWYRAPE 180
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 11/171 (6%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 123
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
++H D+KP+N+L++ K++DFGLA+ YT T Y APE
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTLWYRAPE 173
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 17/185 (9%)
Query: 497 KLGQGGFGSVY-LGMLPDGIQVAVKKLESIG--QGKKEFSAEVTTIGNVHHL-HLVKLKG 552
++G G G V+ + G +AVK++ G + K ++ + H ++V+ G
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFG 91
Query: 553 FCIEGAHRLLAYEYLGNGS--LDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
I +A E +G + L K + E R L + + + K L YL E+
Sbjct: 92 TFITNTDVFIAMELMGTCAEKLKKRMQGPIPE-RILG-----KMTVAIVKALYYLKEKHG 145
Query: 611 VKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPI 670
V +H D+KP N+LLD+ K+ DFG++ + +++ + G Y+APE I + P
Sbjct: 146 V--IHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA--GCAAYMAPERI-DPPD 200
Query: 671 SEKSD 675
K D
Sbjct: 201 PTKPD 205
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 11/171 (6%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 123
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
++H D+KP+N+L++ K++DFGLA+ YT T Y APE
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTLWYRAPE 173
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 11/171 (6%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 69 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 122
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
++H D+KP+N+L++ K++DFGLA+ YT T Y APE
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTLWYRAPE 172
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 10/93 (10%)
Query: 593 NIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDN--FTAKVSDFGLAK---LMNREES 647
NI + L YLH + I H DIKPEN L N F K+ DFGL+K +N E
Sbjct: 172 NIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEY 228
Query: 648 LVYTTLRGTRGYLAPEWI--TNNPISEKSDVYS 678
TT GT ++APE + TN K D +S
Sbjct: 229 YGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 28/178 (15%)
Query: 475 ISGMPTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPDGI---QVAVK--KLESIGQGK 529
+S P+ S D + TK LG+G +G VY + D + VA+K +LE +G
Sbjct: 24 VSAAPSATSIDRYRRITK-----LGEGTYGEVYKAI--DTVTNETVAIKRIRLEHEEEGV 76
Query: 530 KEFSA-EVTTIGNVHHLHLVKLKGFCIEGAHRL-LAYEYLGNGSLDKWIFNSTEESRFLS 587
+ EV+ + + H ++++LK I HRL L +EY N L K++ + + +S
Sbjct: 77 PGTAIREVSLLKELQHRNIIELKS-VIHHNHRLHLIFEYAEN-DLKKYMDKNPD----VS 130
Query: 588 WNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLL-----DDNFTAKVSDFGLAK 640
+ + G+ + H + +H D+KP+N+LL + K+ DFGLA+
Sbjct: 131 MRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM---NREESLVYTTLR 654
+ +GL Y+H +++H D+KP N+L+++N K+ DFG+A+ + E T
Sbjct: 167 LLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYV 223
Query: 655 GTRGYLAPEWI 665
TR Y APE +
Sbjct: 224 ATRWYRAPELM 234
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L S+D F + + + +GLA+ H +
Sbjct: 72 VIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---R 125
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAK 640
++H D+KP+N+L++ K++DFGLA+
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 601 GLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYL 660
G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAG--TSFMMTPYVVTRYYR 192
Query: 661 APEWITNNPISEKSDVYS 678
APE I E D++S
Sbjct: 193 APEVILGMGYKENVDIWS 210
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 41/222 (18%)
Query: 486 DLCKATKNFSTKLGQGGFGSVY--LGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVH 543
D+ A LG+G FG V + G VAVK ++++ + + +E+ + +++
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
Query: 544 H------LHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRF--NIA 595
V++ + H + +E LG + ++ +E+ FL + +A
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLST-----YDFIKENGFLPFRLDHIRKMA 124
Query: 596 LGMAKGLAYLHEECEVKIVHCDIKPENVL-LDDNFTA------------------KVSDF 636
+ K + +LH K+ H D+KPEN+L + ++T KV DF
Sbjct: 125 YQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDF 181
Query: 637 GLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
G A + S TL TR Y APE I S+ DV+S
Sbjct: 182 GSATYDDEHHS----TLVSTRHYRAPEVILALGWSQPCDVWS 219
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR
Sbjct: 173 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTR 227
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 228 YYRAPEVILGMGYKENVDIWS 248
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 13/186 (6%)
Query: 498 LGQGGFGSVYLGMLPDGIQV-----AVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
LG+GGF + D +V K L +++ S E++ ++ H H+V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
F + + E SL + R+ + + G YLH +
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLR-QIVLGCQYLHRN---R 135
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISE 672
++H D+K N+ L+++ K+ DFGLA + + L GT Y+APE ++ S
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKVLCGTPNYIAPEVLSKKGHSF 194
Query: 673 KSDVYS 678
+ DV+S
Sbjct: 195 EVDVWS 200
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRG 655
+ +GL Y+H ++H D+KP N+LL+ K+ DFGLA++ + + + T
Sbjct: 153 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 656 TRGYLAPEWITNNPISEKS-DVYS 678
TR Y APE + N+ KS D++S
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWS 233
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 601 GLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYL 660
G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAG--TSFMMTPYVVTRYYR 192
Query: 661 APEWITNNPISEKSDVYS 678
APE I E D++S
Sbjct: 193 APEVILGMGYKENVDIWS 210
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L S+D F + + + +GLA+ H +
Sbjct: 73 VIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---R 126
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAK 640
++H D+KP+N+L++ K++DFGLA+
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 11/171 (6%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 123
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
++H D+KP+N+L++ K++DFGLA+ YT T Y APE
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTLWYRAPE 173
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 11/171 (6%)
Query: 497 KLGQGGFGSVYLGMLP-DGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 74 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 127
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
++H D+KP+N+L++ K++DFGLA+ YT T Y APE
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTLWYRAPE 177
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 84/191 (43%), Gaps = 32/191 (16%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 101
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+++D +V+DFG AK R + + L GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 209
Query: 665 ITNNPISEKSD 675
I + ++ D
Sbjct: 210 IISKGYNKAVD 220
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 11/171 (6%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 77 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 130
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
++H D+KP+N+L++ K++DFGLA+ YT T Y APE
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTLWYRAPE 180
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR
Sbjct: 173 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTR 227
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 228 YYRAPEVILGMGYKENVDIWS 248
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLV--YTTLRG 655
+ +GL Y+H ++H D+KP N+LL+ K+ DFGLA++ + + T
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 656 TRGYLAPEWITNNPISEKS-DVYS 678
TR Y APE + N+ KS D++S
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWS 217
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 13/186 (6%)
Query: 498 LGQGGFGSVYLGMLPDGIQV-----AVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
LG+GGF + D +V K L +++ S E++ ++ H H+V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
F + + E SL + R+ + + G YLH +
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLR-QIVLGCQYLHRN---R 159
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISE 672
++H D+K N+ L+++ K+ DFGLA + + L GT Y+APE ++ S
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKVLCGTPNYIAPEVLSKKGHSF 218
Query: 673 KSDVYS 678
+ DV+S
Sbjct: 219 EVDVWS 224
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRG 655
+ +GL Y+H ++H D+KP N+LL+ K+ DFGLA++ + + + T
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 656 TRGYLAPEWITNNPISEKS-DVYS 678
TR Y APE + N+ KS D++S
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWS 217
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 18/174 (10%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLESIGQGK-KEFSA---EVTTIGNVHHLHLVKLKG 552
LG G FG V L + G A+K L+ K K+ E + V+ LVKL+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ ++ + EY G + F+ RF + RF A + YLH +
Sbjct: 109 SFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---L 160
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+++ D+KPEN+++D KV+DFG AK R + + L GT YLAPE I
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGFAK---RVKGRTW-XLCGTPEYLAPEII 210
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLV--YTTLRG 655
+ +GL Y+H ++H D+KP N+LL+ K+ DFGLA++ + + T
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 656 TRGYLAPEWITNNPISEKS-DVYS 678
TR Y APE + N+ KS D++S
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWS 213
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLV--YTTLRG 655
+ +GL Y+H ++H D+KP N+LL+ K+ DFGLA++ + + T
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 656 TRGYLAPEWITNNPISEKS-DVYS 678
TR Y APE + N+ KS D++S
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWS 213
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR
Sbjct: 135 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTR 189
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 190 YYRAPEVILGMGYKENVDIWS 210
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 102
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 210
Query: 665 I 665
I
Sbjct: 211 I 211
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR
Sbjct: 136 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTR 190
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 191 YYRAPEVILGMGYKENVDIWS 211
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 101
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 209
Query: 665 I 665
I
Sbjct: 210 I 210
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 102
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 210
Query: 665 I 665
I
Sbjct: 211 I 211
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 13/186 (6%)
Query: 498 LGQGGFGSVYLGMLPDGIQV-----AVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKG 552
LG+GGF + D +V K L +++ S E++ ++ H H+V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
F + + E SL + R+ + + G YLH +
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLR-QIVLGCQYLHRN---R 161
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISE 672
++H D+K N+ L+++ K+ DFGLA + + L GT Y+APE ++ S
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER-KKVLCGTPNYIAPEVLSKKGHSF 220
Query: 673 KSDVYS 678
+ DV+S
Sbjct: 221 EVDVWS 226
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 11/171 (6%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKL----ESIGQGKKE-FSAEVTTIGNVHHLHLVKLKG 552
+G+G FG V + + + ++ K+ E + + + F E + N + L
Sbjct: 98 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 157
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
+ H L +Y G L + S E + RF I M + +H+ +
Sbjct: 158 AFQDENHLYLVMDYYVGGDLLTLL--SKFEDKLPEDMARFYIG-EMVLAIDSIHQ---LH 211
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
VH DIKP+NVLLD N +++DFG MN + ++ + GT Y++PE
Sbjct: 212 YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPE 262
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR
Sbjct: 135 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTR 189
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 190 YYRAPEVILGMGYKENVDIWS 210
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 102
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 210
Query: 665 I 665
I
Sbjct: 211 I 211
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKL----ESIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+ +G G +GSV G +VAVKKL +SI K+ + E+ + ++ H +++ L
Sbjct: 28 SPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGL 86
Query: 551 KGFCIEGAHRLLAYE--YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEE 608
A L + YL + + N + + + +F I + +GL Y+H
Sbjct: 87 LD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHS- 143
Query: 609 CEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP N+ ++++ K+ DF LA+ + E T TR Y APE + N
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE----MTGYVATRWYRAPEIMLN 196
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 11/171 (6%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKL----ESIGQGKKE-FSAEVTTIGNVHHLHLVKLKG 552
+G+G FG V + + + ++ K+ E + + + F E + N + L
Sbjct: 82 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 141
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
+ H L +Y G L + S E + RF I M + +H+ +
Sbjct: 142 AFQDENHLYLVMDYYVGGDLLTLL--SKFEDKLPEDMARFYIG-EMVLAIDSIHQ---LH 195
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
VH DIKP+NVLLD N +++DFG MN + ++ + GT Y++PE
Sbjct: 196 YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPE 246
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 601 GLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYL 660
G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR Y
Sbjct: 138 GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYR 192
Query: 661 APEWITNNPISEKSDVYS 678
APE I E D++S
Sbjct: 193 APEVILGMGYKENVDIWS 210
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR
Sbjct: 129 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTR 183
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 184 YYRAPEVILGMGYKENVDIWS 204
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR
Sbjct: 136 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTR 190
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 191 YYRAPEVILGMGYKENVDIWS 211
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR
Sbjct: 136 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTR 190
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 191 YYRAPEVILGMGYKENVDIWS 211
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 101
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 209
Query: 665 I 665
I
Sbjct: 210 I 210
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR
Sbjct: 134 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTR 188
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 189 YYRAPEVILGMGYKENVDIWS 209
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 101
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 102 FLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 209
Query: 665 I 665
I
Sbjct: 210 I 210
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR
Sbjct: 135 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTR 189
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 190 YYRAPEVILGMGYKENVDIWS 210
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR
Sbjct: 135 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTR 189
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 190 YYRAPEVILGMGYKENVDIWS 210
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR
Sbjct: 128 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTR 182
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 183 YYRAPEVILGMGYKENVDIWS 203
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR
Sbjct: 129 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTR 183
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 184 YYRAPEVILGMGYKENVDIWS 204
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 497 KLGQGGFGSVYLGMLP-DGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 123
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAK 640
++H D+KP+N+L++ K++DFGLA+
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 123
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAK 640
++H D+KP+N+L++ K++DFGLA+
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 72/157 (45%), Gaps = 29/157 (18%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFSAEV---------TTIGNVHHLH 546
K+G G FG +YLG + +VA+ KLE++ + E T I NV
Sbjct: 14 KIGSGSFGEIYLGTNIQTNEEVAI-KLENVKTKHPQLLYESKIYRILQGGTGIPNV---- 68
Query: 547 LVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
+ F +EG + +L + LG D +FN SR LS T +A M + ++H
Sbjct: 69 ----RWFGVEGDYNVLVMDLLGPSLED--LFNFC--SRKLSLKTVLMLADQMINRVEFVH 120
Query: 607 EECEVKIVHCDIKPENVLLDDNFTAK---VSDFGLAK 640
+ +H DIKP+N L+ A + DFGLAK
Sbjct: 121 SKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 12/174 (6%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGK---KEFSAEVTTIGNVHHLHLVKLK 551
T +G G +GSV + G +VA+KKL Q + K E+ + ++ H +++ L
Sbjct: 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ Y++ + +F ++ + M KGL Y+H
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-LVYQMLKGLKYIHS---A 145
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+VH D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE I
Sbjct: 146 GVVHRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVI 195
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRG 655
+ +GL Y+H ++H D+KP N+LL+ K+ DFGLA++ + + + T
Sbjct: 135 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 656 TRGYLAPEWITNNPISEKS-DVYS 678
TR Y APE + N+ KS D++S
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWS 215
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRG 655
+ +GL Y+H ++H D+KP N+LL+ K+ DFGLA++ + + + T
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 656 TRGYLAPEWITNNPISEKS-DVYS 678
TR Y APE + N+ KS D++S
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWS 217
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 31/209 (14%)
Query: 469 DNFL-------EKISGMPTRFSYDDLCKATKNFSTKLGQGGFGSVYLGMLPDGIQV-AVK 520
DNFL +KI G+ + D+ K +G+G FG V L +V A+K
Sbjct: 54 DNFLNRYEKIVKKIRGLQMKAEDYDVVKV-------IGRGAFGEVQLVRHKASQKVYAMK 106
Query: 521 KLESIGQGKKEFSA----EVTTIGNVHHLHLVKLKGFCI--EGAHRLLAYEYLGNGSLDK 574
L K+ SA E + + +V+L FC + + + EY+ G L
Sbjct: 107 LLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVN 164
Query: 575 WIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVS 634
+ N + W + + +A L +H + ++H D+KP+N+LLD + K++
Sbjct: 165 LMSNYDVPEK---WAKFYTAEVVLA--LDAIHS---MGLIHRDVKPDNMLLDKHGHLKLA 216
Query: 635 DFGLAKLMNREESLVYTTLRGTRGYLAPE 663
DFG M+ + T GT Y++PE
Sbjct: 217 DFGTCMKMDETGMVHCDTAVGTPDYISPE 245
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 497 KLGQGGFGSVYLGMLP-DGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 72 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 125
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAK 640
++H D+KP+N+L++ K++DFGLA+
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 69 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 122
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAK 640
++H D+KP+N+L++ K++DFGLA+
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 71 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 124
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAK 640
++H D+KP+N+L++ K++DFGLA+
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 123
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAK 640
++H D+KP+N+L++ K++DFGLA+
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 497 KLGQGGFGSVYLGMLP-DGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 73 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 126
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAK 640
++H D+KP+N+L++ K++DFGLA+
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 497 KLGQGGFGSVYLGMLP-DGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 72 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 125
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAK 640
++H D+KP+N+L++ K++DFGLA+
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRG 655
+ +GL Y+H ++H D+KP N+LL+ K+ DFGLA++ + + + T
Sbjct: 135 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 656 TRGYLAPEWITNNPISEKS-DVYS 678
TR Y APE + N+ KS D++S
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWS 215
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 102
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY G + F+ RF + RF A + Y
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+++D KV+DFG AK R + + L GT YLAPE
Sbjct: 158 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 210
Query: 665 I 665
I
Sbjct: 211 I 211
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 497 KLGQGGFGSVYLGMLP-DGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 73 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 126
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAK 640
++H D+KP+N+L++ K++DFGLA+
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 69 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 122
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAK 640
++H D+KP+N+L++ K++DFGLA+
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRG 655
+ +GL Y+H ++H D+KP N+LL+ K+ DFGLA++ + + + T
Sbjct: 138 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 656 TRGYLAPEWITNNPISEKS-DVYS 678
TR Y APE + N+ KS D++S
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWS 218
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRG 655
+ +GL Y+H ++H D+KP N+LL+ K+ DFGLA++ + + + T
Sbjct: 139 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 656 TRGYLAPEWITNNPISEKS-DVYS 678
TR Y APE + N+ KS D++S
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWS 219
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRG 655
+ +GL Y+H ++H D+KP N+LL+ K+ DFGLA++ + + + T
Sbjct: 130 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 656 TRGYLAPEWITNNPISEKS-DVYS 678
TR Y APE + N+ KS D++S
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWS 210
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRG 655
+ +GL Y+H ++H D+KP N+LL+ K+ DFGLA++ + + + T
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 656 TRGYLAPEWITNNPISEKS-DVYS 678
TR Y APE + N+ KS D++S
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWS 217
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 74 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 127
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAK 640
++H D+KP+N+L++ K++DFGLA+
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRG 655
+ +GL Y+H ++H D+KP N+LL+ K+ DFGLA++ + + + T
Sbjct: 135 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 656 TRGYLAPEWITNNPISEKS-DVYS 678
TR Y APE + N+ KS D++S
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWS 215
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRG 655
+ +GL Y+H ++H D+KP N+LL+ K+ DFGLA++ + + + T
Sbjct: 153 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 656 TRGYLAPEWITNNPISEKS-DVYS 678
TR Y APE + N+ KS D++S
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWS 233
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRG 655
+ +GL Y+H ++H D+KP N+LL+ K+ DFGLA++ + + + T
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 656 TRGYLAPEWITNNPISEKS-DVYS 678
TR Y APE + N+ KS D++S
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWS 217
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 122
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEY 177
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAPE
Sbjct: 178 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEI 230
Query: 665 I 665
I
Sbjct: 231 I 231
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRG 655
+ +GL Y+H ++H D+KP N+LL+ K+ DFGLA++ + + + T
Sbjct: 131 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 656 TRGYLAPEWITNNPISEKS-DVYS 678
TR Y APE + N+ KS D++S
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWS 211
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRG 655
+ +GL Y+H ++H D+KP N+LL+ K+ DFGLA++ + + + T
Sbjct: 141 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 656 TRGYLAPEWITNNPISEKS-DVYS 678
TR Y APE + N+ KS D++S
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWS 221
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRG 655
+ +GL Y+H ++H D+KP N+LL+ K+ DFGLA++ + + + T
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 656 TRGYLAPEWITNNPISEKS-DVYS 678
TR Y APE + N+ KS D++S
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWS 213
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 123
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAK 640
++H D+KP+N+L++ K++DFGLA+
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRG 655
+ +GL Y+H ++H D+KP N+LL+ K+ DFGLA++ + + + T
Sbjct: 131 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 656 TRGYLAPEWITNNPISEKS-DVYS 678
TR Y APE + N+ KS D++S
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWS 211
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR
Sbjct: 135 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPEVVTR 189
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 190 YYRAPEVILGMGYKENVDIWS 210
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRG 655
+ +GL Y+H ++H D+KP N+LL+ K+ DFGLA++ + + + T
Sbjct: 133 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 656 TRGYLAPEWITNNPISEKS-DVYS 678
TR Y APE + N+ KS D++S
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWS 213
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 497 KLGQGGFGSVYLGMLP-DGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 71 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 124
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAK 640
++H D+KP+N+L++ K++DFGLA+
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 15/180 (8%)
Query: 499 GQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEG 557
GQG FG+V LG G+ VA+KK+ + + + + +HH ++V+L+ +
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTL 91
Query: 558 AHRL-------LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
R + EY+ + +L + N + + + LH
Sbjct: 92 GERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-S 149
Query: 611 VKIVHCDIKPENVLLDD-NFTAKVSDFGLA-KLMNREESLVYTTLRGTRGYLAPEWITNN 668
V + H DIKP NVL+++ + T K+ DFG A KL E ++ Y +R Y APE I N
Sbjct: 150 VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYIC---SRYYRAPELIFGN 206
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 90/209 (43%), Gaps = 39/209 (18%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLE----SIGQGKKEFSAEVTTIGNVHHLHLVKLKGF 553
LG G G+V G VAVK++ I + + E NV ++ +
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNV-------IRYY 93
Query: 554 CIEGAHRLL--AYEYLGNGSLDKWIFNSTEESRFLSWNTRFN-IAL--GMAKGLAYLHEE 608
C E R L A E L N +L + + L +N I+L +A G+A+LH
Sbjct: 94 CSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS- 151
Query: 609 CEVKIVHCDIKPENVLLD-------------DNFTAKVSDFGLAKLMNREESLVYTTLR- 654
+KI+H D+KP+N+L+ +N +SDFGL K ++ + L
Sbjct: 152 --LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 209
Query: 655 --GTRGYLAPEWI---TNNPISEKSDVYS 678
GT G+ APE + T ++ D++S
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFS 238
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR
Sbjct: 140 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTR 194
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 195 YYRAPEVILGMGYKENVDLWS 215
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 18/174 (10%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLESIGQGK-KEFSA---EVTTIGNVHHLHLVKLKG 552
LG G FG V L + G A+K L+ K K+ E + V+ L KL+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ ++ + EY G + F+ RF + RF A + YLH +
Sbjct: 110 SFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS---L 161
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+++ D+KPEN+++D KV+DFG AK R + + L GT YLAPE I
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAK---RVKGRTW-XLCGTPEYLAPEII 211
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 90/209 (43%), Gaps = 39/209 (18%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLE----SIGQGKKEFSAEVTTIGNVHHLHLVKLKGF 553
LG G G+V G VAVK++ I + + E NV ++ +
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNV-------IRYY 93
Query: 554 CIEGAHRLL--AYEYLGNGSLDKWIFNSTEESRFLSWNTRFN-IAL--GMAKGLAYLHEE 608
C E R L A E L N +L + + L +N I+L +A G+A+LH
Sbjct: 94 CSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS- 151
Query: 609 CEVKIVHCDIKPENVLLD-------------DNFTAKVSDFGLAKLMNREESLVYTTLR- 654
+KI+H D+KP+N+L+ +N +SDFGL K ++ + L
Sbjct: 152 --LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 209
Query: 655 --GTRGYLAPEWI---TNNPISEKSDVYS 678
GT G+ APE + T ++ D++S
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFS 238
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 11/171 (6%)
Query: 497 KLGQGGFGSVYLG---MLPDGIQVAVKKLESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY + + + + +L++ +G + E++ + ++H ++VKL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 123
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
++H D+KP+N+L++ K++DFGLA+ YT T Y APE
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTLWYRAPE 173
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 11/171 (6%)
Query: 497 KLGQGGFGSVYLG---MLPDGIQVAVKKLESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY + + + + +L++ +G + E++ + ++H ++VKL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GLA+ H +
Sbjct: 69 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 122
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
++H D+KP+N+L++ K++DFGLA+ YT T Y APE
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTLWYRAPE 172
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 12/174 (6%)
Query: 496 TKLGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGK---KEFSAEVTTIGNVHHLHLVKLK 551
T +G G +GSV + G +VA+KKL Q + K E+ + ++ H +++ L
Sbjct: 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 552 GFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ Y++ + F ++ + M KGL Y+H
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-LVYQMLKGLKYIHS---A 163
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+VH D+KP N+ ++++ K+ DFGLA+ + E T TR Y APE I
Sbjct: 164 GVVHRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVI 213
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + TR
Sbjct: 137 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMVPFVVTR 191
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 192 YYRAPEVILGMGYKENVDIWS 212
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + T TR
Sbjct: 129 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTR 183
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 184 YYRAPEVILGMGYKENVDLWS 204
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 24/185 (12%)
Query: 498 LGQGGFGSVYLGMLPD-GIQVAVKKLE-SIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCI 555
LG GG G V+ + D +VA+KK+ + Q K E+ I + H ++VK+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 556 EGAHRL---------LAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLH 606
+L L Y+ ++ + N E+ L + R + +GL Y+H
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL-FMYQLLRGLKYIH 137
Query: 607 EECEVKIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNRE--------ESLVYTTLRGTR 657
++H D+KP N+ ++ ++ K+ DFGLA++M+ E LV R R
Sbjct: 138 S---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPR 194
Query: 658 GYLAP 662
L+P
Sbjct: 195 LLLSP 199
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 11/171 (6%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L + L K++ S L + L +GL++ H +
Sbjct: 70 VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLSFCHSH---R 123
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
++H D+KP+N+L++ K++DFGLA+ YT T Y APE
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTLWYRAPE 173
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 18/174 (10%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLESIGQGK-KEFSA---EVTTIGNVHHLHLVKLKG 552
LG G FG V L + G A+K L+ K K+ E + V+ LVKL+
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ ++ + EY G + F+ RF + RF A + YLH +
Sbjct: 109 SFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---L 160
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+++ D+KPEN+++D +V+DFG AK R + + L GT YLAPE I
Sbjct: 161 DLIYRDLKPENLMIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEII 210
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 32/146 (21%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKKLE----SIGQGKKEFSAEVTTIGNV---------- 542
K+G G FGSV+ VK+L+ +I + KK + V +
Sbjct: 16 KIGSGEFGSVF---------KCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG 66
Query: 543 HHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRF---NIALGMA 599
H H+V+ E H L+ EY GSL I +E R +S+ ++ L +
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI---SENYRIMSYFKEAELKDLLLQVG 123
Query: 600 KGLAYLHEECEVKIVHCDIKPENVLL 625
+GL Y+H + +VH DIKP N+ +
Sbjct: 124 RGLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 32/146 (21%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKKLE----SIGQGKKEFSAEVTTIGNV---------- 542
K+G G FGSV+ VK+L+ +I + KK + V +
Sbjct: 16 KIGSGEFGSVF---------KCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG 66
Query: 543 HHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRF---NIALGMA 599
H H+V+ E H L+ EY GSL I +E R +S+ ++ L +
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI---SENYRIMSYFKEAELKDLLLQVG 123
Query: 600 KGLAYLHEECEVKIVHCDIKPENVLL 625
+GL Y+H + +VH DIKP N+ +
Sbjct: 124 RGLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 17/190 (8%)
Query: 498 LGQGGFGSV---YLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVH----HLHLVKL 550
+G+G FG V Y + + + + + K + + + + + N H ++V L
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHL 121
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
K + H L +E L D + +T R +S N A M L +L E
Sbjct: 122 KRHFMFRNHLCLVFEMLSYNLYD--LLRNTN-FRGVSLNLTRKFAQQMCTALLFL-ATPE 177
Query: 611 VKIVHCDIKPENVLL--DDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNN 668
+ I+HCD+KPEN+LL K+ DFG + + + +Y ++ +R Y +PE +
Sbjct: 178 LSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQR---IYQXIQ-SRFYRSPEVLLGM 233
Query: 669 PISEKSDVYS 678
P D++S
Sbjct: 234 PYDLAIDMWS 243
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 77/181 (42%), Gaps = 24/181 (13%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIE- 556
+G+G +G V+ G+ G VAVK S + ++ + E T I N L + GF
Sbjct: 16 VGKGRYGEVWRGLW-HGESVAVKIFSS--RDEQSWFRE-TEIYNTVLLRHDNILGFIASD 71
Query: 557 ------GAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC- 609
L Y +GSL ++ T E +A+ A GLA+LH E
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA-----LRLAVSAACGLAHLHVEIF 126
Query: 610 ----EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLV---YTTLRGTRGYLAP 662
+ I H D K NVL+ N ++D GLA + ++ + GT+ Y+AP
Sbjct: 127 GTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAP 186
Query: 663 E 663
E
Sbjct: 187 E 187
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 32/146 (21%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKKLE----SIGQGKKEFSAEVTTIGNV---------- 542
K+G G FGSV+ VK+L+ +I + KK + V +
Sbjct: 18 KIGSGEFGSVF---------KCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG 68
Query: 543 HHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRF---NIALGMA 599
H H+V+ E H L+ EY GSL I +E R +S+ ++ L +
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI---SENYRIMSYFKEAELKDLLLQVG 125
Query: 600 KGLAYLHEECEVKIVHCDIKPENVLL 625
+GL Y+H + +VH DIKP N+ +
Sbjct: 126 RGLRYIH---SMSLVHMDIKPSNIFI 148
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 32/146 (21%)
Query: 497 KLGQGGFGSVYLGMLPDGIQVAVKKLE----SIGQGKKEFSAEVTTIGNV---------- 542
K+G G FGSV+ VK+L+ +I + KK + V +
Sbjct: 14 KIGSGEFGSVF---------KCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG 64
Query: 543 HHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRF---NIALGMA 599
H H+V+ E H L+ EY GSL I +E R +S+ ++ L +
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI---SENYRIMSYFKEAELKDLLLQVG 121
Query: 600 KGLAYLHEECEVKIVHCDIKPENVLL 625
+GL Y+H + +VH DIKP N+ +
Sbjct: 122 RGLRYIH---SMSLVHMDIKPSNIFI 144
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 38/211 (18%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGK-KEFSAEVTTIGNVH-HLHLVKLKGFC 554
L +GGF VY + G + A+K+L S + K + EV + + H ++V+ FC
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ---FC 92
Query: 555 IE----------GAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAY 604
G L L G L +++ E LS +T I + + +
Sbjct: 93 SAASIGKEESDTGQAEFLLLTELCKGQLVEFL-KKMESRGPLSCDTVLKIFYQTCRAVQH 151
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR--------------EESLVY 650
+H + + I+H D+K EN+LL + T K+ DFG A ++ EE +
Sbjct: 152 MHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR 210
Query: 651 TTLRGTRGYLAPEWI---TNNPISEKSDVYS 678
T T Y PE I +N PI EK D+++
Sbjct: 211 NT---TPMYRTPEIIDLYSNFPIGEKQDIWA 238
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 18/174 (10%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLESIGQGK-KEFSA---EVTTIGNVHHLHLVKLKG 552
LG G FG V L + G A+K L+ K K+ E + V+ L KL+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ ++ + EY G + F+ RF + RF A + YLH +
Sbjct: 110 SFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---L 161
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+++ D+KPEN+++D KV+DFG AK R + + L GT YLAPE I
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAK---RVKGRTW-XLCGTPEYLAPEII 211
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 43/213 (20%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLE----SIGQGKKEFSAEVTTIGNVHHLHLVKLKGF 553
LG G G+V G VAVK++ I + + E NV ++ +
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNV-------IRYY 75
Query: 554 CIEGAHRLL--AYEYLGNGSLDKWIFNSTEESRFLSWNTRFN-IAL--GMAKGLAYLHEE 608
C E R L A E L N +L + + L +N I+L +A G+A+LH
Sbjct: 76 CSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS- 133
Query: 609 CEVKIVHCDIKPENVLLD-------------DNFTAKVSDFGLAKLMNREESLVYTTLR- 654
+KI+H D+KP+N+L+ +N +SDFGL K ++ + L
Sbjct: 134 --LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 191
Query: 655 --GTRGYLAPEWI-------TNNPISEKSDVYS 678
GT G+ APE + T ++ D++S
Sbjct: 192 PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFS 224
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 18/174 (10%)
Query: 498 LGQGGFGSVYL-GMLPDGIQVAVKKLESIGQGK-KEFSA---EVTTIGNVHHLHLVKLKG 552
LG G FG V L + G A+K L+ K K+ E + V+ L KL+
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAYLHEECEV 611
+ ++ + EY G + F+ RF + RF A + YLH +
Sbjct: 110 SFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---L 161
Query: 612 KIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
+++ D+KPEN+++D KV+DFG AK R + + L GT YLAPE I
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAK---RVKGRTW-XLCGTPEYLAPEII 211
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVH-HLHLVKLKGFC 554
K+G G FG +YLG + G +VA+ KLE + + E + + + +K
Sbjct: 16 KIGSGSFGDIYLGANIASGEEVAI-KLECVKTKHPQLHIESKFYKMMQGGVGIPSIKWCG 74
Query: 555 IEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIV 614
EG + ++ E LG D +FN SR S T +A M + Y+H + +
Sbjct: 75 AEGDYNVMVMELLGPSLED--LFNFC--SRKFSLKTVLLLADQMISRIEYIHSK---NFI 127
Query: 615 HCDIKPENVLL---DDNFTAKVSDFGLAK 640
H D+KP+N L+ + DFGLAK
Sbjct: 128 HRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 19/173 (10%)
Query: 514 GIQVAVKKLESIGQGK---KEFSAEVTTIGNVHHLHLVKLKGF-----CIEGAHRLLAYE 565
GI VAVKKL Q + K E+ + V+H +++ L +E +
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 566 YLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLL 625
L + +L + I + R +S+ + M G+ +LH I+H D+KP N+++
Sbjct: 109 ELMDANLCQVIHMELDHER-MSY-----LLYQMLCGIKHLHS---AGIIHRDLKPSNIVV 159
Query: 626 DDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
+ T K+ DFGLA+ + + T TR Y APE I + D++S
Sbjct: 160 KSDCTLKILDFGLARTACT--NFMMTPYVVTRYYRAPEVILGMGYAANVDIWS 210
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 101
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT YLAP
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPAI 209
Query: 665 I 665
I
Sbjct: 210 I 210
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQA-------VNFP 102
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY G + F+ RF + RF A + Y
Sbjct: 103 FLVKLEFSFKDNSNLYMVLEYAPGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D KV+DFG AK R + + L GT YLAPE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK---RVKGRTW-XLCGTPEYLAPEI 210
Query: 665 I 665
I
Sbjct: 211 I 211
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 497 KLGQGGFGSVYLGMLP-DGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E+L D F + + + +GLA+ H +
Sbjct: 73 VIHTENKLYLVFEFLHQ---DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---R 126
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAK 640
++H D+KP+N+L++ K++DFGLA+
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 87/215 (40%), Gaps = 17/215 (7%)
Query: 476 SGMPTRFSYDD---LCKATKNFSTKLGQGGFGSVYLGM-LPDGIQVAVKKLE------SI 525
SG+ R S D L + +G+G F V + G Q AVK ++ S
Sbjct: 9 SGLVPRGSMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSP 68
Query: 526 GQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRF 585
G ++ E + + H H+V+L + +E++ L I +
Sbjct: 69 GLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFV 128
Query: 586 LSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLL---DDNFTAKVSDFGLAKLM 642
S + + + L Y H+ I+H D+KP VLL +++ K+ FG+A +
Sbjct: 129 YSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 185
Query: 643 NREESLVYTTLRGTRGYLAPEWITNNPISEKSDVY 677
E LV GT ++APE + P + DV+
Sbjct: 186 G-ESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVW 219
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 31/158 (19%)
Query: 497 KLGQGGFGSVYLGMLPDGIQ-VAVKK--LESIGQGKKEFS-AEVTTIGNVHHLHLVKLKG 552
K+G+G +G+V+ + + VA+K+ L+ +G + E+ + + H ++V+L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 553 FCIEGAHRLLAYEYLG----------NGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
L +E+ NG LD I S FL + KGL
Sbjct: 69 VLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKS-----FL---------FQLLKGL 114
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAK 640
+ H ++H D+KP+N+L++ N K++DFGLA+
Sbjct: 115 GFCHSR---NVLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 17/190 (8%)
Query: 498 LGQGGFGSV---YLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVH----HLHLVKL 550
+G+G FG V Y + + + + + K + + + + + N H ++V L
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHL 121
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
K + H L +E L D + +T R +S N A M L +L E
Sbjct: 122 KRHFMFRNHLCLVFEMLSYNLYD--LLRNTN-FRGVSLNLTRKFAQQMCTALLFL-ATPE 177
Query: 611 VKIVHCDIKPENVLL--DDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNN 668
+ I+HCD+KPEN+LL K+ DFG + + + +Y ++ +R Y +PE +
Sbjct: 178 LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR---IYQXIQ-SRFYRSPEVLLGM 233
Query: 669 PISEKSDVYS 678
P D++S
Sbjct: 234 PYDLAIDMWS 243
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 14/190 (7%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLE------SIGQGKKEFSAEVTTIGNVHHLHLVKL 550
+G+G F V + G Q AVK ++ S G ++ E + + H H+V+L
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
+ +E++ L I + S + + + L Y H+
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN-- 149
Query: 611 VKIVHCDIKPENVLL---DDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
I+H D+KP VLL +++ K+ FG+A + E LV GT ++APE +
Sbjct: 150 -NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG-ESGLVAGGRVGTPHFMAPEVVKR 207
Query: 668 NPISEKSDVY 677
P + DV+
Sbjct: 208 EPYGKPVDVW 217
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 13/149 (8%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFC- 554
K+G G FG +YLG + G +VA+ KLE + + E + + +C
Sbjct: 16 KIGSGSFGDIYLGTDIAAGEEVAI-KLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCG 74
Query: 555 IEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIV 614
EG + ++ E LG D +FN SR S T +A M + Y+H + +
Sbjct: 75 AEGDYNVMVMELLGPSLED--LFNFC--SRKFSLKTVLLLADQMISRIEYIHSK---NFI 127
Query: 615 HCDIKPENVLL---DDNFTAKVSDFGLAK 640
H D+KP+N L+ + DFGLAK
Sbjct: 128 HRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 497 KLGQGGFGSVYLGMLP-DGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E++ + L K++ S L + L +GLA+ H +
Sbjct: 73 VIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFCHSH---R 126
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAK 640
++H D+KP+N+L++ K++DFGLA+
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Query: 544 HLHLVKLKGFCIEGAHRLL-AYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
H LV L C + RL EY+ G L +F+ + + + RF A ++ L
Sbjct: 69 HPFLVGLHS-CFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSA-EISLAL 123
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAP 662
YLHE I++ D+K +NVLLD K++D+G+ K R + GT Y+AP
Sbjct: 124 NYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIAP 179
Query: 663 E 663
E
Sbjct: 180 E 180
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 10/124 (8%)
Query: 543 HHLHLVKLKGFCIEGAHRLL-AYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKG 601
+H LV L C + RL EY+ G L +F+ + + + RF A ++
Sbjct: 79 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSA-EISLA 133
Query: 602 LAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
L YLHE I++ D+K +NVLLD K++D+G+ K R + GT Y+A
Sbjct: 134 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIA 189
Query: 662 PEWI 665
PE +
Sbjct: 190 PEIL 193
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 13/165 (7%)
Query: 517 VAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWI 576
+ KKL + K E A + + + H ++V+L E L ++ + G L
Sbjct: 37 INTKKLSARDHQKLEREARICRL--LKHSNIVRLHDSISEEGFHYLVFDLVTGGEL---- 90
Query: 577 FNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDN---FTAKV 633
F + S + + + + + H+ + +VH D+KPEN+LL K+
Sbjct: 91 FEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVVHRDLKPENLLLASKCKGAAVKL 147
Query: 634 SDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
+DFGLA + ++ + GT GYL+PE + + D+++
Sbjct: 148 ADFGLAIEVQGDQQ-AWFGFAGTPGYLSPEVLRKEAYGKPVDIWA 191
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 13/149 (8%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFC- 554
K+G G FG +YLG + G +VA+ KLE + + E + + +C
Sbjct: 14 KIGSGSFGDIYLGTDIAAGEEVAI-KLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCG 72
Query: 555 IEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIV 614
EG + ++ E LG D +FN SR S T +A M + Y+H + +
Sbjct: 73 AEGDYNVMVMELLGPSLED--LFNFC--SRKFSLKTVLLLADQMISRIEYIHSK---NFI 125
Query: 615 HCDIKPENVLL---DDNFTAKVSDFGLAK 640
H D+KP+N L+ + DFGLAK
Sbjct: 126 HRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 11/171 (6%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKL----ESIGQGKKE-FSAEVTTIGNVHHLHLVKLKG 552
+G+G FG V + L + +V K+ E + + + F E + N + L
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHY 141
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
+ + L +Y G L + S E R RF +A M + +H+ +
Sbjct: 142 AFQDDNNLYLVMDYYVGGDLLTLL--SKFEDRLPEEMARFYLA-EMVIAIDSVHQ---LH 195
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
VH DIKP+N+L+D N +++DFG + + ++ + GT Y++PE
Sbjct: 196 YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPE 246
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%), Gaps = 17/190 (8%)
Query: 498 LGQGGFGSV---YLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVH----HLHLVKL 550
+G+G FG V Y + + + + + K + + + + + N H ++V L
Sbjct: 43 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHL 102
Query: 551 KGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECE 610
K + H L +E L D + +T R +S N A M L +L E
Sbjct: 103 KRHFMFRNHLCLVFEMLSYNLYD--LLRNTN-FRGVSLNLTRKFAQQMCTALLFL-ATPE 158
Query: 611 VKIVHCDIKPENVLL--DDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITNN 668
+ I+HCD+KPEN+LL K+ DFG + + + +Y ++ +R Y +PE +
Sbjct: 159 LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR---IYQXIQ-SRFYRSPEVLLGM 214
Query: 669 PISEKSDVYS 678
P D++S
Sbjct: 215 PYDLAIDMWS 224
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 544 HLHLVKLKGFCIEGAHRLL-AYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGL 602
H LV L C + RL EY+ G L +F+ + + + RF A ++ L
Sbjct: 65 HPFLVGLHS-CFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSA-EISLAL 119
Query: 603 AYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAP 662
YLHE I++ D+K +NVLLD K++D+G+ K R + GT Y+AP
Sbjct: 120 NYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNYIAP 175
Query: 663 EWI 665
E +
Sbjct: 176 EIL 178
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 613 IVHCDIKPENVLLDDNF-TAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWI 665
++H DIK EN+L+D N K+ DFG L+ + VYT GTR Y PEWI
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 228
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 21/191 (10%)
Query: 496 TKLGQGGFGSVY-LGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNV----HHLHLVKL 550
++LG G +G V+ + DG AVK+ S +G K+ + ++ +G+ H V+L
Sbjct: 63 SRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRL 122
Query: 551 KGFCIEGAHRLLAYEYLG---NGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHE 607
+ EG L E G + W + E W + L LA+LH
Sbjct: 123 EQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQ---VWGYLRDTLLA----LAHLHS 175
Query: 608 ECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
+ +VH D+KP N+ L K+ DFGL L+ + G Y+APE +
Sbjct: 176 Q---GLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMAPELLQG 230
Query: 668 NPISEKSDVYS 678
+ +DV+S
Sbjct: 231 S-YGTAADVFS 240
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M KGL Y+H I+H D+KP N+ ++++ K+ DFGLA+ + E TR
Sbjct: 137 MLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV----TR 189
Query: 658 GYLAPEWITN 667
Y APE I N
Sbjct: 190 WYRAPEVILN 199
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 13/170 (7%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESI---GQGKKEFSAEVTTIGNVHHLHLVKLKGF 553
+G+G F V L + G +VAVK ++ ++ EV + ++H ++VKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKI 613
L EY G + ++ R R + + Y H++ I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYL---VAHGRMKEKEARAKFR-QIVSAVQYCHQKF---I 134
Query: 614 VHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
VH D+K EN+LLD + K++DFG + L T G+ Y APE
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL--DTFCGSPPYAAPE 182
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 41/222 (18%)
Query: 486 DLCKATKNFSTKLGQGGFGSVY--LGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVH 543
D+ A LG+G FG V + G VAVK ++++ + + +E+ + +++
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
Query: 544 H------LHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRF--NIA 595
V++ + H + +E LG + ++ +E+ FL + +A
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLST-----YDFIKENGFLPFRLDHIRKMA 124
Query: 596 LGMAKGLAYLHEECEVKIVHCDIKPENVL-LDDNFTA------------------KVSDF 636
+ K + +LH K+ H D+KPEN+L + ++T KV DF
Sbjct: 125 YQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDF 181
Query: 637 GLAKLMNREESLVYTTLRGTRGYLAPEWITNNPISEKSDVYS 678
G A + S TL R Y APE I S+ DV+S
Sbjct: 182 GSATYDDEHHS----TLVXXRHYRAPEVILALGWSQPCDVWS 219
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 577 FNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDF 636
++ ++ F + RF A + GL ++H +V+ D+KP N+LLD++ ++SD
Sbjct: 281 YHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDL 336
Query: 637 GLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
GLA ++++ GT GY+APE +
Sbjct: 337 GLACDFSKKKPHASV---GTHGYMAPEVLQK 364
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 577 FNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDF 636
++ ++ F + RF A + GL ++H +V+ D+KP N+LLD++ ++SD
Sbjct: 280 YHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDL 335
Query: 637 GLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
GLA ++++ GT GY+APE +
Sbjct: 336 GLACDFSKKKPHASV---GTHGYMAPEVLQK 363
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 13/170 (7%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESI---GQGKKEFSAEVTTIGNVHHLHLVKLKGF 553
+G+G F V L + G +VAVK ++ ++ EV + ++H ++VKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKI 613
L EY G + ++ R R + + Y H++ I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYL---VAHGRMKEKEARAKFR-QIVSAVQYCHQKF---I 134
Query: 614 VHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
VH D+K EN+LLD + K++DFG + L T G+ Y APE
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL--DTFCGSPPYAAPE 182
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 39/197 (19%)
Query: 498 LGQGGFGSVYLGMLPD--GIQVAVKKLESIGQGK--------KEFSAEVTTIGNVHHLHL 547
+ GG G +YL + + G V +K L G + ++F AEV H +
Sbjct: 88 IAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVV------HPSI 141
Query: 548 VKLKGFCIEGAHR------LLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKG 601
V++ F +E R + EY+G SL + + + L L +
Sbjct: 142 VQIFNF-VEHTDRHGDPVGYIVMEYVGGQSLKR------SKGQKLPVAEAIAYLLEILPA 194
Query: 602 LAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLA 661
L+YLH + +V+ D+KPEN++L + K+ D G +N + L GT G+ A
Sbjct: 195 LSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS-----FGYLYGTPGFQA 245
Query: 662 PEWITNNPISEKSDVYS 678
PE + P + +D+Y+
Sbjct: 246 PEIVRTGP-TVATDIYT 261
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 32/203 (15%)
Query: 493 NFSTKLGQGGFGSVYLGMLPD-GIQVAVKKLESIGQGKKE---FSAEVTTIGNVHHLHLV 548
F ++G+G F +VY G+ + ++VA +L+ K E F E + + H ++V
Sbjct: 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIV 88
Query: 549 K--------LKG-FCIEGAHRLLAYEYLGNGSLDKWI--FNSTEESRFLSWNTRFNIALG 597
+ +KG CI +L E +G+L ++ F + SW +
Sbjct: 89 RFYDSWESTVKGKKCI-----VLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ------ 137
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLD-DNFTAKVSDFGLAKLMNREESLVYTTLRGT 656
+ KGL +LH I+H D+K +N+ + + K+ D GLA L + S + GT
Sbjct: 138 ILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATL--KRASFAKAVI-GT 193
Query: 657 RGYLAPEWITNNPISEKSDVYSY 679
+ APE E DVY++
Sbjct: 194 PEFXAPEXYEEK-YDESVDVYAF 215
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 577 FNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDF 636
++ ++ F + RF A + GL ++H +V+ D+KP N+LLD++ ++SD
Sbjct: 281 YHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDL 336
Query: 637 GLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
GLA ++++ GT GY+APE +
Sbjct: 337 GLACDFSKKKPHASV---GTHGYMAPEVLQK 364
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 577 FNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDF 636
++ ++ F + RF A + GL ++H +V+ D+KP N+LLD++ ++SD
Sbjct: 281 YHLSQHGVFSEADMRF-YAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDL 336
Query: 637 GLAKLMNREESLVYTTLRGTRGYLAPEWITN 667
GLA ++++ GT GY+APE +
Sbjct: 337 GLACDFSKKKPHASV---GTHGYMAPEVLQK 364
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 18/178 (10%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEG 557
+G+G +G V+ G G VAVK S + E+ + H +++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 74
Query: 558 AHR----LLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC---- 609
H L Y GSL ++ +T L + I L +A GLA+LH E
Sbjct: 75 RHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 610 -EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT---TLRGTRGYLAPE 663
+ I H D+K +N+L+ N ++D GLA + ++ + + GT+ Y+APE
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 18/178 (10%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEG 557
+G+G +G V+ G G VAVK S + E+ + H +++ +
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 74
Query: 558 AHR----LLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC---- 609
H L Y GSL ++ +T L + I L +A GLA+LH E
Sbjct: 75 RHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 610 -EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT---TLRGTRGYLAPE 663
+ I H D+K +N+L+ N ++D GLA + ++ + + GT+ Y+APE
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRG 655
+ +GL Y+H ++H D+KP N+LL+ K+ DFGLA++ + + +
Sbjct: 137 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 656 TRGYLAPEWITNNPISEKS-DVYS 678
TR Y APE + N+ KS D++S
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWS 217
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLM--NREESLVYTTLRG 655
+ +GL Y+H ++H D+KP N+LL+ K+ DFGLA++ + + +
Sbjct: 138 ILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 656 TRGYLAPEWITNNPISEKS-DVYS 678
TR Y APE + N+ KS D++S
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWS 218
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 28/191 (14%)
Query: 494 FSTKLGQGGFGSVYLGMLPD--------GIQVAVKKLESIGQGKKE-FSAEVTTIGNVHH 544
F+ LGQG F ++ G+ + +V +K L+ + E F + + + H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 545 LHLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAY 604
HLV G C+ G +L E++ GSLD ++ + L W + +A +A + +
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINIL-W--KLEVAKQLAAAMHF 128
Query: 605 LHEECEVKIVHCDIKPENVLL---DDNFTA-----KVSDFGLAKLMNREESLVYTTLRGT 656
L E ++H ++ +N+LL +D T K+SD G++ + L L+
Sbjct: 129 LEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV-----LPKDILQER 180
Query: 657 RGYLAPEWITN 667
++ PE I N
Sbjct: 181 IPWVPPECIEN 191
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 11/171 (6%)
Query: 497 KLGQGGFGSVYLGM-LPDGIQVAVKK--LESIGQGKKEFSA-EVTTIGNVHHLHLVKLKG 552
K+G+G +G VY G VA+KK L++ +G + E++ + ++H ++VKL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 553 FCIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVK 612
L +E++ D F + + + +GLA+ H +
Sbjct: 69 VIHTENKLYLVFEHVHQ---DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---R 122
Query: 613 IVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
++H D+KP+N+L++ K++DFGLA+ YT T Y APE
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTLWYRAPE 172
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 18/178 (10%)
Query: 498 LGQGGFGSVYLGMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHLHLVKLKGFCIEG 557
+G+G +G V+ G G VAVK S + E+ + H +++ +
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 103
Query: 558 AHR----LLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEEC---- 609
H L Y GSL ++ +T L + I L +A GLA+LH E
Sbjct: 104 RHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 610 -EVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYT---TLRGTRGYLAPE 663
+ I H D+K +N+L+ N ++D GLA + ++ + + GT+ Y+APE
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 216
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 585 FLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR 644
FL+ + +AKG+ +L K +H D+ N+LL + K+ DFGLA+ + +
Sbjct: 187 FLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYK 243
Query: 645 EESLVYT-TLRGTRGYLAPEWITNNPISEKSDVYSY 679
+ V R ++APE I + + +SDV+S+
Sbjct: 244 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 279
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 585 FLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR 644
FL+ + +AKG+ +L K +H D+ N+LL + K+ DFGLA+ + +
Sbjct: 189 FLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYK 245
Query: 645 EESLVYT-TLRGTRGYLAPEWITNNPISEKSDVYSY 679
+ V R ++APE I + + +SDV+S+
Sbjct: 246 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 281
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 32/181 (17%)
Query: 498 LGQGGFGSVYL------------GMLPDGIQVAVKKLESIGQGKKEFSAEVTTIGNVHHL 545
LG G FG V L +L V +K++E K+ A V+
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA-------VNFP 101
Query: 546 HLVKLKGFCIEGAHRLLAYEYLGNGSLDKWIFNSTEE-SRFLSWNTRFNIALGMAKGLAY 604
LVKL+ + ++ + EY+ G + F+ RF + RF A + Y
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 605 LHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPEW 664
LH + +++ D+KPEN+L+D +V+DFG AK R + + L GT LAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEALAPEI 209
Query: 665 I 665
I
Sbjct: 210 I 210
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 585 FLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR 644
FL+ + +AKG+ +L K +H D+ N+LL + K+ DFGLA+ + +
Sbjct: 194 FLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYK 250
Query: 645 EESLVYT-TLRGTRGYLAPEWITNNPISEKSDVYSY 679
+ V R ++APE I + + +SDV+S+
Sbjct: 251 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 286
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 598 MAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTR 657
M G+ +LH I+H D+KP N+++ + T K+ DFGLA+ S + TR
Sbjct: 135 MLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMEPEVVTR 189
Query: 658 GYLAPEWITNNPISEKSDVYS 678
Y APE I E D++S
Sbjct: 190 YYRAPEVILGMGYKENVDIWS 210
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 585 FLSWNTRFNIALGMAKGLAYLHEECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNR 644
FL+ + +AKG+ +L K +H D+ N+LL + K+ DFGLA+ + +
Sbjct: 196 FLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYK 252
Query: 645 EESLVYT-TLRGTRGYLAPEWITNNPISEKSDVYSY 679
+ V R ++APE I + + +SDV+S+
Sbjct: 253 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 288
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 25/176 (14%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESI---GQGKKEFSAEVTTIGNVHHLHLVKLKGF 553
+G+G F V L + G +VAVK ++ ++ EV + ++H ++VKL
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 554 CIEGAHRLLAYEYLGNGSL------DKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHE 607
L EY G + W+ ++F + + Y H+
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQ----------IVSAVQYCHQ 124
Query: 608 ECEVKIVHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
+ IVH D+K EN+LLD + K++DFG + L T G+ Y APE
Sbjct: 125 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL--DTFCGSPPYAAPE 175
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 13/170 (7%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESIGQGK---KEFSAEVTTIGNVHHLHLVKLKGF 553
+G+G F V L + G +VAVK ++ ++ EV + ++H ++VKL
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKI 613
L EY G + ++ R R + + Y H++ I
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYL---VAHGRMKEKEARAKFR-QIVSAVQYCHQKY---I 135
Query: 614 VHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
VH D+K EN+LLD + K++DFG + L T G+ Y APE
Sbjct: 136 VHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKL--DTFCGSPPYAAPE 183
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 13/170 (7%)
Query: 498 LGQGGFGSVYLGM-LPDGIQVAVKKLESI---GQGKKEFSAEVTTIGNVHHLHLVKLKGF 553
+G+G F V L + G +VAV+ ++ ++ EV + ++H ++VKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 554 CIEGAHRLLAYEYLGNGSLDKWIFNSTEESRFLSWNTRFNIALGMAKGLAYLHEECEVKI 613
L EY G + ++ R R + + Y H++ I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYL---VAHGRMKEKEARAKFR-QIVSAVQYCHQKF---I 134
Query: 614 VHCDIKPENVLLDDNFTAKVSDFGLAKLMNREESLVYTTLRGTRGYLAPE 663
VH D+K EN+LLD + K++DFG + L T G+ Y APE
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL--DTFCGSPPYAAPE 182
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,754,996
Number of Sequences: 62578
Number of extensions: 879205
Number of successful extensions: 3569
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 296
Number of HSP's that attempted gapping in prelim test: 1855
Number of HSP's gapped (non-prelim): 1239
length of query: 679
length of database: 14,973,337
effective HSP length: 105
effective length of query: 574
effective length of database: 8,402,647
effective search space: 4823119378
effective search space used: 4823119378
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)