Query 046494
Match_columns 724
No_of_seqs 310 out of 897
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 12:43:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046494.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046494hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02219 probable galactinol-- 100.0 5E-209 1E-213 1748.5 69.4 719 1-724 1-773 (775)
2 PLN02684 Probable galactinol-- 100.0 8E-209 2E-213 1746.2 69.3 715 1-724 1-748 (750)
3 PLN02355 probable galactinol-- 100.0 6E-207 1E-211 1736.1 70.6 719 1-724 1-756 (758)
4 PLN02982 galactinol-raffinose 100.0 6E-204 1E-208 1700.9 65.0 704 5-724 22-863 (865)
5 PLN02711 Probable galactinol-- 100.0 1E-202 3E-207 1696.4 66.4 706 1-724 18-775 (777)
6 PF05691 Raffinose_syn: Raffin 100.0 3E-196 6E-201 1660.4 64.3 691 7-711 1-747 (747)
7 PLN02229 alpha-galactosidase 100.0 2.9E-40 6.2E-45 362.1 29.6 337 195-632 63-422 (427)
8 PLN02692 alpha-galactosidase 100.0 3.7E-40 7.9E-45 359.9 28.7 331 195-630 56-411 (412)
9 PLN02808 alpha-galactosidase 100.0 6.3E-40 1.4E-44 357.2 28.2 330 196-629 33-385 (386)
10 PLN03231 putative alpha-galact 100.0 2.1E-36 4.5E-41 326.4 22.2 282 196-496 2-338 (357)
11 PLN02899 alpha-galactosidase 100.0 6.4E-35 1.4E-39 327.2 21.7 281 193-496 29-368 (633)
12 KOG2366 Alpha-D-galactosidase 100.0 1.8E-29 3.8E-34 267.2 17.0 337 196-631 34-413 (414)
13 PF02065 Melibiase: Melibiase; 99.9 3.3E-25 7.1E-30 244.3 21.4 237 153-426 4-256 (394)
14 COG3345 GalA Alpha-galactosida 99.9 2.1E-22 4.6E-27 221.2 18.4 339 111-488 208-601 (687)
15 cd06592 GH31_glucosidase_KIAA1 99.5 3.3E-13 7.2E-18 145.1 13.0 138 193-366 11-166 (303)
16 cd06593 GH31_xylosidase_YicI Y 99.2 9.6E-10 2.1E-14 118.5 19.4 126 207-366 19-160 (308)
17 PRK10658 putative alpha-glucos 98.9 1.3E-07 2.9E-12 111.7 22.7 166 156-366 238-419 (665)
18 cd06595 GH31_xylosidase_XylS-l 98.8 1.8E-07 4E-12 100.4 18.9 204 190-435 7-219 (292)
19 PF01055 Glyco_hydro_31: Glyco 98.7 7.3E-07 1.6E-11 100.7 20.5 161 157-366 1-181 (441)
20 cd06598 GH31_transferase_CtsZ 98.7 2.8E-07 6.1E-12 100.0 16.3 143 189-365 5-164 (317)
21 PRK10426 alpha-glucosidase; Pr 98.7 5.5E-06 1.2E-10 97.8 28.0 168 156-366 179-364 (635)
22 cd06599 GH31_glycosidase_Aec37 98.6 2E-07 4.4E-12 101.2 11.4 143 190-365 6-168 (317)
23 cd06589 GH31 The enzymes of gl 98.6 1.7E-06 3.8E-11 91.5 18.1 103 201-366 13-117 (265)
24 cd06591 GH31_xylosidase_XylS X 98.6 1E-06 2.2E-11 95.7 15.9 138 190-365 6-159 (319)
25 cd06597 GH31_transferase_CtsY 98.6 3.5E-06 7.6E-11 92.5 20.1 152 189-365 5-187 (340)
26 cd06604 GH31_glucosidase_II_Ma 98.4 1.2E-06 2.7E-11 95.9 11.8 139 189-365 5-159 (339)
27 cd06594 GH31_glucosidase_YihQ 98.4 1.6E-05 3.4E-10 86.6 20.2 145 189-366 5-167 (317)
28 cd06602 GH31_MGAM_SI_GAA This 98.3 2.4E-05 5.2E-10 85.9 18.8 194 190-433 6-224 (339)
29 cd06601 GH31_lyase_GLase GLase 98.3 3.8E-06 8.3E-11 91.8 11.5 125 190-365 6-133 (332)
30 cd06600 GH31_MGAM-like This fa 98.3 2.6E-05 5.5E-10 84.9 17.4 136 190-365 6-160 (317)
31 PF10566 Glyco_hydro_97: Glyco 98.2 1.7E-05 3.6E-10 84.2 12.3 126 204-394 24-149 (273)
32 PLN02763 hydrolase, hydrolyzin 98.1 0.00014 3.1E-09 88.6 20.2 157 159-365 161-336 (978)
33 COG1501 Alpha-glucosidases, fa 98.1 0.00022 4.7E-09 85.9 20.6 224 154-433 234-486 (772)
34 cd06603 GH31_GANC_GANAB_alpha 98.1 1.7E-05 3.7E-10 87.0 10.4 136 190-365 6-162 (339)
35 KOG1065 Maltase glucoamylase a 96.9 0.023 4.9E-07 67.9 16.5 161 156-366 268-449 (805)
36 cd06596 GH31_CPE1046 CPE1046 i 90.5 2.6 5.7E-05 44.8 11.3 160 210-462 43-203 (261)
37 PF13200 DUF4015: Putative gly 90.0 8.6 0.00019 42.2 15.1 126 210-368 11-150 (316)
38 TIGR01515 branching_enzym alph 80.8 39 0.00084 40.5 15.7 131 208-365 152-298 (613)
39 cd02871 GH18_chitinase_D-like 78.6 16 0.00034 39.8 10.7 96 280-407 60-155 (312)
40 cd02879 GH18_plant_chitinase_c 69.5 27 0.00059 37.7 9.7 66 281-365 52-118 (299)
41 TIGR02456 treS_nterm trehalose 68.4 79 0.0017 37.2 13.9 30 338-367 173-202 (539)
42 PF00724 Oxidored_FMN: NADH:fl 67.1 99 0.0022 34.1 13.6 127 209-365 33-172 (341)
43 cd06548 GH18_chitinase The GH1 60.9 73 0.0016 34.7 11.1 31 336-366 106-136 (322)
44 PF02638 DUF187: Glycosyl hydr 60.5 1.2E+02 0.0025 33.3 12.4 132 210-365 17-164 (311)
45 cd00598 GH18_chitinase-like Th 59.9 77 0.0017 31.6 10.3 64 336-407 85-148 (210)
46 cd02932 OYE_YqiM_FMN Old yello 54.2 94 0.002 34.1 10.5 70 208-303 30-100 (336)
47 cd06542 GH18_EndoS-like Endo-b 54.0 1E+02 0.0023 32.1 10.5 70 336-409 85-154 (255)
48 cd04734 OYE_like_3_FMN Old yel 53.2 1.5E+02 0.0033 32.8 12.0 126 208-364 30-163 (343)
49 PRK10933 trehalose-6-phosphate 53.1 85 0.0018 37.2 10.5 31 338-368 176-206 (551)
50 cd06544 GH18_narbonin Narbonin 52.1 67 0.0014 34.1 8.6 28 339-366 97-124 (253)
51 cd06543 GH18_PF-ChiA-like PF-C 48.9 1.5E+02 0.0032 32.3 10.8 94 280-406 54-147 (294)
52 cd02873 GH18_IDGF The IDGF's ( 47.5 93 0.002 35.4 9.4 31 336-366 102-132 (413)
53 cd02872 GH18_chitolectin_chito 47.3 91 0.002 34.4 9.2 31 336-366 93-123 (362)
54 PRK14835 undecaprenyl pyrophos 47.2 1.4E+02 0.003 32.3 10.1 84 373-461 170-258 (275)
55 PF13199 Glyco_hydro_66: Glyco 46.8 1.8E+02 0.0039 34.6 11.8 185 205-408 111-312 (559)
56 PRK10785 maltodextrin glucosid 46.2 3.1E+02 0.0068 32.8 13.9 64 210-296 177-241 (598)
57 cd02874 GH18_CFLE_spore_hydrol 44.9 1.2E+02 0.0026 32.8 9.4 66 283-365 48-113 (313)
58 cd02930 DCR_FMN 2,4-dienoyl-Co 43.4 2.9E+02 0.0062 30.7 12.3 74 280-363 77-158 (353)
59 PRK14837 undecaprenyl pyrophos 42.7 83 0.0018 33.1 7.4 38 419-461 176-213 (230)
60 COG3325 ChiA Chitinase [Carboh 41.9 1.1E+02 0.0023 35.1 8.5 88 279-389 110-201 (441)
61 TIGR03326 rubisco_III ribulose 40.7 99 0.0021 35.4 8.1 51 350-406 168-218 (412)
62 cd06545 GH18_3CO4_chitinase Th 40.2 1.1E+02 0.0023 32.2 7.9 65 280-366 46-110 (253)
63 KOG1066 Glucosidase II catalyt 38.1 89 0.0019 37.8 7.3 103 153-300 326-431 (915)
64 PRK12568 glycogen branching en 37.6 5.1E+02 0.011 32.0 13.9 68 338-405 383-462 (730)
65 PRK14582 pgaB outer membrane N 37.3 4E+02 0.0086 32.6 12.8 86 280-369 380-472 (671)
66 cd06546 GH18_CTS3_chitinase GH 37.2 1.3E+02 0.0027 32.0 7.9 30 336-365 93-122 (256)
67 PRK14705 glycogen branching en 36.6 4.7E+02 0.01 34.2 14.0 68 337-404 878-957 (1224)
68 TIGR00055 uppS undecaprenyl di 36.5 1.1E+02 0.0023 32.3 7.0 39 418-461 172-210 (226)
69 cd08207 RLP_NonPhot Ribulose b 35.7 1.1E+02 0.0025 34.8 7.7 51 350-406 167-217 (406)
70 PF15016 DUF4520: Domain of un 35.7 1.5E+02 0.0032 26.5 6.7 45 668-712 8-56 (85)
71 TIGR02402 trehalose_TreZ malto 34.1 6.3E+02 0.014 29.9 13.8 28 339-366 220-248 (542)
72 cd08148 RuBisCO_large Ribulose 31.5 1.5E+02 0.0031 33.5 7.5 51 350-406 151-201 (366)
73 PRK13523 NADPH dehydrogenase N 31.4 6E+02 0.013 28.1 12.3 120 208-364 34-164 (337)
74 cd08212 RuBisCO_large_I Ribulo 31.0 1.5E+02 0.0033 34.2 7.7 53 350-408 169-221 (450)
75 TIGR02403 trehalose_treC alpha 28.9 4E+02 0.0087 31.5 11.0 30 338-367 169-198 (543)
76 PF00150 Cellulase: Cellulase 28.8 5.5E+02 0.012 26.4 11.1 76 195-304 9-85 (281)
77 TIGR01370 cysRS possible cyste 28.7 5.7E+02 0.012 28.2 11.4 67 338-406 143-212 (315)
78 cd08205 RuBisCO_IV_RLP Ribulos 28.4 2.2E+02 0.0047 32.0 8.3 44 345-392 149-192 (367)
79 COG0502 BioB Biotin synthase a 28.2 97 0.0021 34.4 5.4 30 197-226 65-101 (335)
80 cd02803 OYE_like_FMN_family Ol 28.1 1.2E+02 0.0026 32.8 6.2 79 280-364 77-163 (327)
81 KOG2500 Uncharacterized conser 27.7 42 0.0009 35.0 2.2 34 601-634 43-77 (253)
82 cd08206 RuBisCO_large_I_II_III 27.2 1.9E+02 0.0041 33.1 7.6 53 350-408 156-208 (414)
83 PF00478 IMPDH: IMP dehydrogen 27.1 2E+02 0.0044 32.2 7.6 64 215-361 110-176 (352)
84 cd04735 OYE_like_4_FMN Old yel 26.7 3.6E+02 0.0079 29.9 9.7 80 280-364 78-166 (353)
85 PRK05402 glycogen branching en 26.4 1.1E+03 0.025 28.8 14.6 27 338-364 379-406 (726)
86 cd08560 GDPD_EcGlpQ_like_1 Gly 25.9 1.1E+02 0.0023 34.3 5.3 64 283-365 281-348 (356)
87 COG0113 HemB Delta-aminolevuli 25.7 9E+02 0.02 26.7 11.8 118 209-391 58-187 (330)
88 PRK14836 undecaprenyl pyrophos 25.7 3E+02 0.0065 29.4 8.4 80 373-461 141-225 (253)
89 PF13200 DUF4015: Putative gly 25.2 1.6E+02 0.0035 32.5 6.4 63 162-227 242-305 (316)
90 cd08213 RuBisCO_large_III Ribu 24.9 2.3E+02 0.005 32.5 7.7 51 350-406 155-205 (412)
91 PF07643 DUF1598: Protein of u 24.7 1.1E+02 0.0024 27.2 4.0 40 280-327 27-70 (84)
92 PRK05628 coproporphyrinogen II 24.6 5.5E+02 0.012 28.5 10.7 109 205-363 137-245 (375)
93 PF14307 Glyco_tran_WbsX: Glyc 24.4 9E+02 0.02 26.7 12.2 145 204-406 50-199 (345)
94 cd08209 RLP_DK-MTP-1-P-enolase 24.3 2.3E+02 0.0049 32.3 7.5 51 350-406 148-198 (391)
95 PRK12313 glycogen branching en 24.1 1.1E+03 0.024 28.3 13.8 28 338-365 284-312 (633)
96 cd04733 OYE_like_2_FMN Old yel 24.1 3E+02 0.0066 30.2 8.4 23 280-303 82-105 (338)
97 cd02877 GH18_hevamine_XipI_cla 24.0 5.1E+02 0.011 27.9 9.9 61 280-365 59-131 (280)
98 PF14488 DUF4434: Domain of un 23.7 3.8E+02 0.0082 26.6 8.2 30 201-233 10-39 (166)
99 PRK14827 undecaprenyl pyrophos 23.3 1.5E+02 0.0032 32.4 5.6 80 373-461 194-278 (296)
100 PRK14839 undecaprenyl pyrophos 22.9 4.5E+02 0.0097 27.9 8.8 18 283-301 43-60 (239)
101 PRK14830 undecaprenyl pyrophos 22.2 6.6E+02 0.014 26.8 10.1 81 372-461 148-233 (251)
102 COG0071 IbpA Molecular chapero 22.1 2E+02 0.0044 27.6 5.8 34 678-713 99-132 (146)
103 cd02929 TMADH_HD_FMN Trimethyl 21.8 9.3E+02 0.02 26.9 11.8 80 280-365 83-173 (370)
104 COG1649 Uncharacterized protei 21.3 1.1E+03 0.024 27.2 12.1 134 208-366 60-210 (418)
105 PLN02784 alpha-amylase 21.3 9.2E+02 0.02 30.5 12.2 79 193-296 505-583 (894)
106 PRK07379 coproporphyrinogen II 21.1 7.1E+02 0.015 28.1 10.8 110 204-363 143-252 (400)
107 PLN02803 beta-amylase 21.0 2.2E+02 0.0047 33.6 6.5 57 209-297 104-160 (548)
108 PRK04208 rbcL ribulose bisopho 20.9 3.2E+02 0.0069 31.9 7.9 49 351-405 185-233 (468)
109 cd04747 OYE_like_5_FMN Old yel 20.7 7.5E+02 0.016 27.7 10.7 80 281-365 79-167 (361)
No 1
>PLN02219 probable galactinol--sucrose galactosyltransferase 2
Probab=100.00 E-value=4.8e-209 Score=1748.52 Aligned_cols=719 Identities=53% Similarity=1.003 Sum_probs=685.3
Q ss_pred CcccceEEEeeCceEEEcCeecccCCCCceEEccc--------eeeccccCCCCCCceEEeccccCCCceEEEEeeeccC
Q 046494 1 MTVTAKATIIKDGCLMVRGNVVLTGVPQNVVVSPS--------SFIGATSAAPPSSRHVFTLGVLPDGYRFLCLFRFKIW 72 (724)
Q Consensus 1 ~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~--------~~~g~~~~~~~~~~~~~~lG~~~~~~r~~al~R~k~~ 72 (724)
||||+.|+| +||+|+|+|+++|++||+||++||+ +||||+++ +++|||+++||++ +++|||||||||+|
T Consensus 1 mt~~~~~~~-~~~~l~v~g~~~l~~vp~nv~~t~~~~~~~~~g~F~G~~~~-~~~srhv~~~G~l-~~~rf~~~fRfK~W 77 (775)
T PLN02219 1 MTVTPKISI-NNGNLVVQGKTILTGVPDNIVLTPGSGNGFVAGAFIGATAS-HSKSLHVFPVGVL-EGLRFMCCFRFKLW 77 (775)
T ss_pred CcccceeEE-cCCeEEECCEEeeccCCCceEecCCCCCCCCcceEEeeecC-Ccccceeeecccc-cCcEEeeeeehhhh
Confidence 999999999 9999999999999999999999998 69999999 9999999999999 99999999999999
Q ss_pred ccccccCCCCCCCCccceEEEEeecCCCCCcccCCCCCcEEEEEEEeecCceEEEEecCCCCcEEEEEEcCCcccccccc
Q 046494 73 WMIPRVGKSASEVPMETQMLLLEAREDSPLDADAASDNTFYILLLPVLDGQFRATLQGTPTNDLQFCVESGDSSVQTSEA 152 (724)
Q Consensus 73 W~~pr~G~~~~~~~~etq~~l~e~~~~~~l~~~~~~~~~~y~v~Lpls~g~~ra~l~~~~~~~~~i~~~sg~~~~~~~~~ 152 (724)
||+||+|++++|||.||||+|+|.++....+ ++..+.+.|+|+|||++|.|||+||++++++|+||+|||++.++++++
T Consensus 78 Wmt~~~G~~g~dip~eTQ~~l~e~~~~~~~~-~~~~~~~~Y~~~lP~~eg~fRa~Lqg~~~~~l~iclesg~~~v~~~~~ 156 (775)
T PLN02219 78 WMTQRMGSCGKDIPLETQFMLLESKDEVEGG-NGDDAPTIYTVFLPLLEGQFRAVLQGNDKNEIEICLESGDKAVETNQG 156 (775)
T ss_pred ccchhhccCCCcCCcceEEEEEEcCCCcccc-ccccCCcceEEEEeecCCceEEEecCCCCCcEEEEEecCCcccccccc
Confidence 9999999999999999999999999632111 111234579999999999999999999999999999999999999999
Q ss_pred ceEEEEEecCChhHHHHHHHHHHHHhcCcCCCccccccCcccccccccchhhhhhccCHHHHHHHHHHHHHCCCCCcEEE
Q 046494 153 FEAVFINSGDNPFELIKDSIKILEKHKGTFSHLENKKIPRHLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPRFLV 232 (724)
Q Consensus 153 ~~~v~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~~vi 232 (724)
..++||++|+|||++|++|++++++|++||++|++|++|+++|+|||||||+||++|||++|++++++|+++|+|++|||
T Consensus 157 ~~~v~~~~G~dPy~li~~a~~av~~h~~tf~~re~K~~p~~~D~~GWCTWdafy~dVt~~~I~~~l~~l~e~gip~~~vi 236 (775)
T PLN02219 157 LHLVYMHAGTNPFEVIRQAVKAVEKHMQTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLI 236 (775)
T ss_pred ceEEEEecCCCHHHHHHHHHHHHHHhcccccccccccCccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCcCcCccCCCCCCCCccccccccccccccccCCCCCCCC-CCCCCCcHHHHHHHHHHHcCCceEEeeeccccccCCC
Q 046494 233 IDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKENCKFNSSG-SDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGYWGGV 311 (724)
Q Consensus 233 IDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n~KFP~~~-~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi 311 (724)
||||||++++++++.++...+|.||++||++|++|.||+... ..++|.|||++|++||+++|||||||||||+||||||
T Consensus 237 IDDGwQsi~~~~~~~~~~~~~g~qf~~rL~~f~en~KF~~~~~~~~fp~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv 316 (775)
T PLN02219 237 IDDGWQQIENKEKDENCVVQEGAQFATRLTGIKENAKFQKNDQKNEQVSGLKHVVDDAKQRHNVKQVYVWHALAGYWGGV 316 (775)
T ss_pred EccCccccccccccccccccccchhhhhhccccccccccccccccCCCCcHHHHHHHHHhccCCcEEEEeeeccceecCc
Confidence 999999999887766788899999999999999999998432 3468899999999999999999999999999999999
Q ss_pred CCCchhhhh-------------------hhhccccccCCccccChhHHHHHHHHHHHHHhhcCCCEEEEccccchhhccC
Q 046494 312 LPSSDIMKK-------------------DIAMDSLEKYGVGIIDPQKIFDFYNDLHSYLANSGVDGVKVDVQSLMETLGS 372 (724)
Q Consensus 312 ~P~s~~~~~-------------------d~~~~~~~~~G~g~v~p~da~~fy~~~~~~Las~GVD~VKvD~q~~l~~l~~ 372 (724)
+|+++++++ |++++.+..+|+++++|+++++||++||+||+++||||||||+|+.+++++.
T Consensus 317 ~P~~~~~~~Y~~~~~~p~~spg~~~~~pd~a~d~l~~~G~glV~P~~~~~FYd~~hsyLas~GVDgVKVDvQ~~Le~L~~ 396 (775)
T PLN02219 317 KPAAAGMEHYDSALAYPVQSPGVLGNQPDIVMDSLSVHGLGLVNPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGA 396 (775)
T ss_pred CCCCcccccccccccccccCCCccccCcchhhhhhhhCCccccCHHHHHHHHHHHHHHHHHcCCCEEEEchhhhHHHhhc
Confidence 999877753 5677778889999999999999999999999999999999999999999999
Q ss_pred CCCChhhHHHHHHHHHHHHHHhhCCCCceEeeccCCCcccccccccceEeecCCCCCCCcchhhHHHHHHHHhhhhccCC
Q 046494 373 GYGGRVLLTRQYQQALEQSVAWNFKDNNLICCMSHNSYSLYSSMKSAVARASEDFMPGEPTFQTLHIASVAFNSLLLGEI 452 (724)
Q Consensus 373 ~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cMs~~~~~~~~~~~~~~~R~SdDf~p~~p~~~~~hi~~~a~nsl~~g~~ 452 (724)
++++|++++++||+||++|++|||+++++|+||||+++++|+.++++++|+||||||++|++|++||++|||||||||++
T Consensus 397 ~~ggrv~la~~y~~ALe~S~~r~F~~ng~I~CMsh~~d~i~~~k~sav~R~SDDF~P~dP~sh~~Hi~~nAyNSLllg~~ 476 (775)
T PLN02219 397 GHGGRVSLTRSYQQALEASIARNFTDNGCISCMCHNTDGLYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNTLFLGEF 476 (775)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHhCCCCCeEEecccCchhhhcccccceeecccccccCCCccCcchhhhhhhhhHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccccccHHHHHHHHHhcCCcEEEecCCCCCcHHhhhhhcCCCCceeeeccCCCCCccccccccCCCCcceEE
Q 046494 453 VVPDWDMFQSKHETAEFHATARALGGCAVYVSDKPGVHDFKILKRLVLPDGSVLRARHAGRPTRDCLFEDPVMDGKSLLK 532 (724)
Q Consensus 453 ~~pDwDMf~s~h~~a~~HaaaraisggPvyisD~pg~hd~~lL~~lv~pdG~ilR~~~pg~pt~d~lf~dp~~d~~~lLk 532 (724)
+|||||||||.||+|+|||++||||||||||||+||+||++||||||+|||+||||++||||||||||.||++|++++||
T Consensus 477 v~PDWDMFqS~Hp~A~~HAaaRAiSGGPIYvSD~PG~Hdf~LLk~LvlpDGsIlR~~~pg~PTrDclF~Dp~~dg~slLK 556 (775)
T PLN02219 477 MQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLK 556 (775)
T ss_pred cccCchhceecCccHHHHHHHHhhcCCcEEEecCCCCccHHHHHHhhCCCCceeccccCCCcchhhhccccCCCCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCcceEEEEeecCCCCCCCcccccccCCC-CCCceeeeecCCchhhhhhhcCCCCCCcEEEEEeccceEEecCCCC
Q 046494 533 IWNLNKLSGVIGVFNCQGAGSWPMKEDMHRKPA-SPLSISGHVCPLDIEFLERVAGENWNGDCAVYAFNSGVLTKLPKKG 611 (724)
Q Consensus 533 i~n~~~~~gvlg~FN~~~~g~w~~~~~~~~~~~-~~~~~~~~v~~~D~~~~~~~a~~~~~~~~~vy~~~~g~~~~l~~~~ 611 (724)
|||+|+++||||+|||||+| ||++++++++|+ ++.++|+.|++.||+++.++++++|+++|+||+|++|+++++++++
T Consensus 557 Iwn~n~~~gviG~FNcqGag-W~~~~~~~~~~~~~~~~~s~~v~~~Dv~~i~~~a~~~w~~~~~vy~~~sg~l~~l~~~~ 635 (775)
T PLN02219 557 IWNVNKCTGVVGVFNCQGAG-WCKIEKKTRIHDTSPGTLTGSVCADDVDQIAQVAGEDWSGDSVVYAYKSGEVVRLPKGA 635 (775)
T ss_pred EEEcccccceEEEEeccCCC-CCchhhccccccCCCcceEEEEcchhccchhhccccCcCCCEEEEEeccCeEEEcCCCC
Confidence 99999999999999999999 999999999999 9999999999999999999999999999999999999999999999
Q ss_pred ceEEEecCCceEEEEEeeeeEecCceeEEEeeehhhccCCcceeEEEEEE--eC----------------------ceeE
Q 046494 612 NLEVSLATLKCEIYTICPIRVLGQDLLFAPIGLLDMYNSGGAVESFEYIM--DL----------------------SKYI 667 (724)
Q Consensus 612 ~~~v~L~~~~~ei~t~~Pv~~~~~~~~~A~iGL~~~~~~~~av~~~~~~~--~~----------------------~~~~ 667 (724)
.++|+|++++|||||++||+.+..+++||||||+||||++|||+++++.. +. ....
T Consensus 636 ~~~vtL~~~~~Ei~tv~Pv~~~~~~~~fApiGL~~m~n~ggAi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (775)
T PLN02219 636 SIPVTLKVLEYELFHFCPLKEIATNISFAPIGLLDMFNSGGAVEQFEIHMVSDKAPELFDGEISSELSTSLSENRSPTAT 715 (775)
T ss_pred ceEEEecCCcEEEEEEeeEEEecCCcEEEecchhhcccCceeeEEeEeecccccccccccccccccccccccccCCCCce
Confidence 99999999999999999999999899999999999999999999999851 10 1346
Q ss_pred EEEEeeecceeEEEecCCCceEeecCeeeeeEEeCCCcEEEEEcCC-CCceeeEEeeC
Q 046494 668 IKIKGKGCGRFGAYSSSKPKCCMVDTKEEEFTYNAEDGLLTVKLPG-ECTLRDIEFVY 724 (724)
Q Consensus 668 ~~v~vkg~G~~g~YsS~~P~~~~vdg~~~~f~y~~~~glltv~lp~-~~~~~~~~~~~ 724 (724)
|+|+|||||+||+|||++|++|.|||++++|+|++++|||+|+||| +++.++|.|||
T Consensus 716 v~~~v~G~G~f~aYsS~~P~~c~vd~~~~~f~y~~~sg~~~~~l~~~~~~~~~~~v~~ 773 (775)
T PLN02219 716 IALSVRGCGRFGAYSSQRPLKCAVGSTETDFTYDAEVGLLTLTLPVTEEEMYRWHVEI 773 (775)
T ss_pred EEEEEEcccceeeEecCCCeEEEECCEEeeeEEcCCCCeEEEEccCCcccCceeeEEE
Confidence 9999999999999999999999999999999999999999999999 88889999986
No 2
>PLN02684 Probable galactinol--sucrose galactosyltransferase
Probab=100.00 E-value=7.6e-209 Score=1746.22 Aligned_cols=715 Identities=47% Similarity=0.897 Sum_probs=679.9
Q ss_pred CcccceEEEeeCceEEEcCeecccCCCCceEEccc--------eeeccccCCCCCCceEEeccccCCCceEEEEeeeccC
Q 046494 1 MTVTAKATIIKDGCLMVRGNVVLTGVPQNVVVSPS--------SFIGATSAAPPSSRHVFTLGVLPDGYRFLCLFRFKIW 72 (724)
Q Consensus 1 ~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~--------~~~g~~~~~~~~~~~~~~lG~~~~~~r~~al~R~k~~ 72 (724)
||||+.|+| +||+|+|+|+++|++||+||++||+ +||||+++ +++|||+++||++ +++|||||||||+|
T Consensus 1 mt~~~~~~~-~~~~l~v~g~~~l~~vp~nv~~t~~~~~~~~~g~f~g~~~~-~~~srhv~~~G~l-~~~rf~~~fRfK~W 77 (750)
T PLN02684 1 MTIKPAVRI-SDGKLIVKNRTILTGVPDNVIATSGSESGPVEGVFVGAVFD-KENSKHVVSLGTL-RDVRFMACFRFKLW 77 (750)
T ss_pred CcccceeEE-cCCeEEECCEEeeccCCCceEecCCCCCCcCcceEEeeecC-Ccccceeeecccc-cCcEeehhhhhhhh
Confidence 999999999 9999999999999999999999998 69999999 9999999999999 99999999999999
Q ss_pred ccccccCCCCCCCCccceEEEEeecCCCCCcccCCC--CCcEEEEEEEeecCceEEEEecCCCCcEEEEEEcCCcccccc
Q 046494 73 WMIPRVGKSASEVPMETQMLLLEAREDSPLDADAAS--DNTFYILLLPVLDGQFRATLQGTPTNDLQFCVESGDSSVQTS 150 (724)
Q Consensus 73 W~~pr~G~~~~~~~~etq~~l~e~~~~~~l~~~~~~--~~~~y~v~Lpls~g~~ra~l~~~~~~~~~i~~~sg~~~~~~~ 150 (724)
||+||+|++++|||.||||+|+|.++++.+..||.. +.+.|+|+|||++|+|||+||++++++++||+|||+++|+++
T Consensus 78 Wmt~~~G~~g~dip~eTQ~ll~e~~~~~~~~~~~~~~~~~~~Y~v~lPi~eg~fRa~Lqg~~~d~~~ic~eSg~~~v~~s 157 (750)
T PLN02684 78 WMAQKMGDMGRDIPLETQFLLVETKDGSHLESDGANEENQKVYTVFLPLIEGSFRACLQGNVNDELELCLESGDVDTKRS 157 (750)
T ss_pred hcchhhcCCCCCCCchhEEEEEEcCCCcccccccccccCCcceEEEEEecCCceEEEecCCCCCcEEEEEecCCcccccc
Confidence 999999999999999999999999987766555432 345799999999999999999999999999999999999999
Q ss_pred ccceEEEEEecCChhHHHHHHHHHHHHhcCcCCCccccccCcccccccccchhhhhhccCHHHHHHHHHHHHHCCCCCcE
Q 046494 151 EAFEAVFINSGDNPFELIKDSIKILEKHKGTFSHLENKKIPRHLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPRF 230 (724)
Q Consensus 151 ~~~~~v~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~~ 230 (724)
++..++||++|+|||++|++|++++++|++||++|++|++|+++|+||||||||||++|||++|++++++|+++|+|++|
T Consensus 158 ~~~~~~~v~~g~~Py~~i~~a~~~v~~~l~tf~~reeK~~P~~~D~fGWCTWdafy~dVt~~~I~~~l~~l~~~g~p~~~ 237 (750)
T PLN02684 158 SFTHSLFIHAGTDPFQTITDAIRAVKLHLKSFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLKSLAAGGTPPKF 237 (750)
T ss_pred ccceeEEEecCCCHHHHHHHHHHHHHHHhhccchhhhccCccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCcCcCccCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccccCC
Q 046494 231 LVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKENCKFNSSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGYWGG 310 (724)
Q Consensus 231 viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n~KFP~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgG 310 (724)
||||||||+..+++++.++. ..+.||.+||++|++|+|||+. ..++.|||++|++||+++|||||||||||+|||||
T Consensus 238 vIIDDGwQs~~~d~~~~~~~-~~~~q~~~rL~~f~en~KF~~~--~~p~~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGG 314 (750)
T PLN02684 238 VIIDDGWQSVGGDPTVEAGD-EKKEQPLLRLTGIKENEKFKKK--DDPNVGIKNIVNIAKEKHGLKYVYVWHAITGYWGG 314 (750)
T ss_pred EEEecccccccccccccccc-cccchhhhhhccCccccccccc--cCCCccHHHHHHHHHhhcCCcEEEEEeeecccccc
Confidence 99999999998876544433 3458999999999999999942 23447999999999999999999999999999999
Q ss_pred CCCCchhhhh-------------------hhhccccccCCccccChhHHHHHHHHHHHHHhhcCCCEEEEccccchhhcc
Q 046494 311 VLPSSDIMKK-------------------DIAMDSLEKYGVGIIDPQKIFDFYNDLHSYLANSGVDGVKVDVQSLMETLG 371 (724)
Q Consensus 311 i~P~s~~~~~-------------------d~~~~~~~~~G~g~v~p~da~~fy~~~~~~Las~GVD~VKvD~q~~l~~l~ 371 (724)
|+|+++++++ |++.+.+..+|+|+++|+++++||++||+||+++||||||||+|+.+++++
T Consensus 315 v~P~~~~~~~Y~s~~~~p~~s~gv~~~~p~~~~d~l~~~g~glv~P~~~~~FYd~~hsyL~s~GVDgVKVD~Q~~le~l~ 394 (750)
T PLN02684 315 VRPGVKEMEEYGSVMKYPNVSKGVVENDPTWKTDVMTLQGLGLVNPKKVYKFYNELHSYLADAGIDGVKVDVQCILETLG 394 (750)
T ss_pred cCCCCcchhhccccccccccCccccccCccccccccccCcccccCHHHHHHHHHHHHHHHHHcCCCeEEEChhhhHHHhh
Confidence 9999877653 445566777899999999999999999999999999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHHHHHHhhCCCCceEeeccCCCcccccccccceEeecCCCCCCCcchhhHHHHHHHHhhhhccC
Q 046494 372 SGYGGRVLLTRQYQQALEQSVAWNFKDNNLICCMSHNSYSLYSSMKSAVARASEDFMPGEPTFQTLHIASVAFNSLLLGE 451 (724)
Q Consensus 372 ~~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cMs~~~~~~~~~~~~~~~R~SdDf~p~~p~~~~~hi~~~a~nsl~~g~ 451 (724)
.++++|++++++||+||++|++|||+++++|+||||+++++|++++++++|+||||||++|++|++||++|||||||||+
T Consensus 395 ~~~ggrv~l~~ay~~ALe~S~~r~F~~ngvI~CMs~~~d~i~~sk~sav~R~SDDF~p~dP~sh~~Hi~~~AyNSLllg~ 474 (750)
T PLN02684 395 AGLGGRVELTRQYHQALDASVARNFPDNGCIACMSHNTDALYCSKQTAVVRASDDFYPRDPVSHTIHIAAVAYNSVFLGE 474 (750)
T ss_pred cccCcHHHHHHHHHHHHHHHHHHhCCCCCeEEecccCchhhhcccccceeeeccccccCCCccchhhhhhhhhhhhhhcc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccccccHHHHHHHHHhcCCcEEEecCCCCCcHHhhhhhcCCCCceeeeccCCCCCccccccccCCCCcceE
Q 046494 452 IVVPDWDMFQSKHETAEFHATARALGGCAVYVSDKPGVHDFKILKRLVLPDGSVLRARHAGRPTRDCLFEDPVMDGKSLL 531 (724)
Q Consensus 452 ~~~pDwDMf~s~h~~a~~HaaaraisggPvyisD~pg~hd~~lL~~lv~pdG~ilR~~~pg~pt~d~lf~dp~~d~~~lL 531 (724)
++|||||||||.||+|+|||++||||||||||||+||+||++||||||+|||+||||++||+|||||||.||++|++++|
T Consensus 475 ~v~PDWDMFqS~hp~A~~HAaaRAisGGPIYvSD~PG~Hdf~LLk~LvlpDGsIlR~~~pg~PTrDcLF~DP~~dg~slL 554 (750)
T PLN02684 475 FMQPDWDMFHSLHPAAEYHASARAISGGPLYVSDAPGKHNFELLKKLVLPDGSILRARLPGRPTRDCLFSDPARDGVSLL 554 (750)
T ss_pred ccccCcccceecCccHHHHHHHHhhcCCceEEecCCCCccHHHHHhhhCCCCcccccccCCccchhhhccCcccCCccEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCcceEEEEeecCCCCCCCcccccccCCC-CCCceeeeecCCchhhhhhhcCC-CCCCcEEEEEeccceEEecCC
Q 046494 532 KIWNLNKLSGVIGVFNCQGAGSWPMKEDMHRKPA-SPLSISGHVCPLDIEFLERVAGE-NWNGDCAVYAFNSGVLTKLPK 609 (724)
Q Consensus 532 ki~n~~~~~gvlg~FN~~~~g~w~~~~~~~~~~~-~~~~~~~~v~~~D~~~~~~~a~~-~~~~~~~vy~~~~g~~~~l~~ 609 (724)
||||+|+++||||+|||||+| ||++.+++.+|+ ++.++|+.|+++|++++.++++. +|+++|+||+|++|+++++++
T Consensus 555 KIwn~n~~tGViG~FNcqGag-w~~~~~~~~~~~~~~~~~s~~v~~~Dv~~~~~~a~~~~w~~~~~vy~h~s~~l~~l~~ 633 (750)
T PLN02684 555 KIWNMNKYTGVLGVYNCQGAA-WSSTERKNIFHQTKTDSLTGSIRGRDVHLIAEAATDPNWNGDCAVYCHSRGELITMPY 633 (750)
T ss_pred EEEEecCCCceEEEEeccCCc-cCccccccccCCCCCccceeeecccccchhhhhccCCCCCCCEEEEEecCCeEEecCC
Confidence 999999999999999999999 999999999999 89999999999999999999987 499999999999999999999
Q ss_pred CCceEEEecCCceEEEEEeeeeEecCceeEEEeeehhhccCCcceeEEEEEEeCceeEEEEEeeecceeEEEecCCCceE
Q 046494 610 KGNLEVSLATLKCEIYTICPIRVLGQDLLFAPIGLLDMYNSGGAVESFEYIMDLSKYIIKIKGKGCGRFGAYSSSKPKCC 689 (724)
Q Consensus 610 ~~~~~v~L~~~~~ei~t~~Pv~~~~~~~~~A~iGL~~~~~~~~av~~~~~~~~~~~~~~~v~vkg~G~~g~YsS~~P~~~ 689 (724)
++.++|+|++++|||||++||+++.++++||||||+||||++|||+++++...+ .+++|+|||||+||+|+|.+|++|
T Consensus 634 ~~~~~vtL~~~~~Ei~t~~Pv~~~~~~~~fApiGL~~m~n~ggAi~~~~~~~~~--~~v~v~vkg~G~~g~YsS~~P~~c 711 (750)
T PLN02684 634 NASLPVSLKVLEHEIFTVTPIKHLAPGFSFAPLGLINMYNAGGAIEGLKYEVKK--GKVVMEVKGCGKFGAYSSVKPRRC 711 (750)
T ss_pred CCceEEEecCCcEEEEEEeeEEEecCCcEEEecchhhcccCcceEEEEEEeccc--ceEEEEEEecceeEEEEcCCCcEE
Confidence 999999999999999999999999989999999999999999999999987543 359999999999999999999999
Q ss_pred eecCeeeeeEEeCCCcEEEEEcCC-CCcee-eEEeeC
Q 046494 690 MVDTKEEEFTYNAEDGLLTVKLPG-ECTLR-DIEFVY 724 (724)
Q Consensus 690 ~vdg~~~~f~y~~~~glltv~lp~-~~~~~-~~~~~~ 724 (724)
.|||++++|+|++++|+|+|+||| +++++ +|.|||
T Consensus 712 ~v~~~~~~f~y~~~~g~~~~~~~~~~~~~~~~~~v~~ 748 (750)
T PLN02684 712 VVESNEIAFEYDSSSGLVTFELDKMPEEGKRLHLVEV 748 (750)
T ss_pred EECCEEEeeEEcCCCCeEEEEcCCCccccCcceEEEE
Confidence 999999999999999999999999 77877 999985
No 3
>PLN02355 probable galactinol--sucrose galactosyltransferase 1
Probab=100.00 E-value=5.8e-207 Score=1736.11 Aligned_cols=719 Identities=50% Similarity=0.922 Sum_probs=686.4
Q ss_pred CcccceEEEeeCceEEEcCeecccCCCCceEEccc--------eeeccccCCCCCCceEEeccccCCCceEEEEeeeccC
Q 046494 1 MTVTAKATIIKDGCLMVRGNVVLTGVPQNVVVSPS--------SFIGATSAAPPSSRHVFTLGVLPDGYRFLCLFRFKIW 72 (724)
Q Consensus 1 ~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~--------~~~g~~~~~~~~~~~~~~lG~~~~~~r~~al~R~k~~ 72 (724)
||||+.|+| +||+|+|+|+++|++||+||++||+ +||||+++ +++|||+++||++ +++|||||||||.|
T Consensus 1 mt~~~~~~~-~~~~l~v~g~~~l~~vp~nv~~t~~~~~~~~~g~f~g~~~~-~~~srhv~~~G~l-~~~rf~~~frfK~W 77 (758)
T PLN02355 1 MTVGAGISV-ADGNLVVLGNRVLHDVHDNVLVTPASGGALINGAFIGVRSD-QVGSRRVFPVGKL-EDLRFMCVFRFKLW 77 (758)
T ss_pred CcccceeEE-eCCeEEECCEEeeccCCCceEecCCCCCCcCcceEEeeecC-CCccceeeecccc-cCcEeeeeehhhhh
Confidence 999999999 9999999999999999999999998 69999999 9999999999999 99999999999999
Q ss_pred ccccccCCCCCCCCccceEEEEeecCCCCCccc--CC-CCCcEEEEEEEeecCceEEEEecCCCCcEEEEEEcCCccccc
Q 046494 73 WMIPRVGKSASEVPMETQMLLLEAREDSPLDAD--AA-SDNTFYILLLPVLDGQFRATLQGTPTNDLQFCVESGDSSVQT 149 (724)
Q Consensus 73 W~~pr~G~~~~~~~~etq~~l~e~~~~~~l~~~--~~-~~~~~y~v~Lpls~g~~ra~l~~~~~~~~~i~~~sg~~~~~~ 149 (724)
||+||+|++++|||.||||||+|.++++.+.++ +. .+.+.|+|+|||++|+|||+||++++++++||+|||++.+++
T Consensus 78 Wmt~~~G~~g~dip~eTQ~ll~e~~~~~~~~~~~~~~~~~~~~Y~v~lPi~~g~fra~Lqg~~~~~l~ic~eSG~~~v~~ 157 (758)
T PLN02355 78 WMTQRMGTCGQDIPFETQFLIVEARDGSHLGNGGEGGEDQSSVYTVFLPILEGDFRAVLQGNEHNELEICLESGDPAVDE 157 (758)
T ss_pred hccccccCCCcCCChhheEEEEEcCCcccccccccccCCCCceeEEEEeecCCceEEEEecCCCCcEEEEEEcCCCcccc
Confidence 999999999999999999999999976554322 11 134579999999999999999999999999999999999999
Q ss_pred cccceEEEEEecCChhHHHHHHHHHHHHhcCcCCCccccccCcccccccccchhhhhhccCHHHHHHHHHHHHHCCCCCc
Q 046494 150 SEAFEAVFINSGDNPFELIKDSIKILEKHKGTFSHLENKKIPRHLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPR 229 (724)
Q Consensus 150 ~~~~~~v~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~ 229 (724)
+++.+++|+++|+|||++|++|++++++|++||++|++|++|+++|+|||||||+||++|||++|++++++|+++|+|++
T Consensus 158 ~~~~~~v~v~~g~dpy~li~~a~~~v~~hl~tf~~re~K~~P~~ld~~GWCTW~afy~~Vt~~~I~~~l~~l~~~g~p~~ 237 (758)
T PLN02355 158 FEGSHLVFVAAGSDPFDVITNAVKAVEKHLQTFSHRERKKMPDMLNWFGWCTWDAFYTNVTAEGVKQGLESLEKGGVTPK 237 (758)
T ss_pred ccCceEEEEEcCCCHHHHHHHHHHHHHHHhccccchhhccCCcccceeeEEehhHhhccCCHHHHHHHHHHHHhCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCcCcCccCCCCCCCCccccccccccccccccCCCCCCC-C----CCCCCCcHHHHHHHHHHHcCCceEEeeecc
Q 046494 230 FLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKENCKFNSS-G----SDNSCNDLHEFIDEIKEKYGLKYVYMWHAL 304 (724)
Q Consensus 230 ~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n~KFP~~-~----~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal 304 (724)
|||||||||+..++.++.++.+.++.||++||++|++|.|||.. + .+.+|.|||++|+.||+++|||||||||||
T Consensus 238 ~viIDDGwQs~~~d~~~~~~~~~~~~q~~~rL~~f~~n~KF~~~~~~~~~~~~~~~Glk~~V~~iK~~~~vk~V~VWHAL 317 (758)
T PLN02355 238 FVIIDDGWQSVGMDPTGIECLADNSANFANRLTHIKENHKFQKNGKEGHRVDDPALGLGHIVTEIKEKHSLKYVYVWHAI 317 (758)
T ss_pred EEEEeccccccccccccccccccccchhhhhhccccccccccccccccccccCCCCcHHHHHHHHHhhcCCcEEEEeeee
Confidence 99999999999777666677888999999999999999999942 1 233478999999999999999999999999
Q ss_pred ccccCCCCCCchhhhh-------------------hhhccccccCCccccChhHHHHHHHHHHHHHhhcCCCEEEEcccc
Q 046494 305 AGYWGGVLPSSDIMKK-------------------DIAMDSLEKYGVGIIDPQKIFDFYNDLHSYLANSGVDGVKVDVQS 365 (724)
Q Consensus 305 ~GYWgGi~P~s~~~~~-------------------d~~~~~~~~~G~g~v~p~da~~fy~~~~~~Las~GVD~VKvD~q~ 365 (724)
+||||||+|+++++++ |++++.+..+|+++++|+++++||++||+||+++||||||||+|+
T Consensus 318 ~GYWGGv~P~~~~~~~Y~~~~~~p~~spGv~~~~~~~a~d~i~~~G~glv~Pe~~~~FY~~~hsyL~s~GVDgVKVD~Q~ 397 (758)
T PLN02355 318 TGYWGGVKPGVAGMEHYESKMSYPVSSPGVQSNEPCDALESITTNGLGLVNPEKVFSFYNELHSYLASAGIDGVKVDVQN 397 (758)
T ss_pred cceecCcCCCCcccccccccccccccCCcccccCcchhhhhcccCceeccCHHHHHHHHHHHHHHHHHcCCCeEEEchhh
Confidence 9999999999877653 566777889999999999999999999999999999999999999
Q ss_pred chhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeeccCCCcccccccccceEeecCCCCCCCcchhhHHHHHHHHh
Q 046494 366 LMETLGSGYGGRVLLTRQYQQALEQSVAWNFKDNNLICCMSHNSYSLYSSMKSAVARASEDFMPGEPTFQTLHIASVAFN 445 (724)
Q Consensus 366 ~l~~l~~~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cMs~~~~~~~~~~~~~~~R~SdDf~p~~p~~~~~hi~~~a~n 445 (724)
.+++++.++++|++++++||+||++|++|||+++++|+||||+++++|++++++++|+||||||++|++|++||++||||
T Consensus 398 ~le~l~~g~ggrv~la~~y~~ALe~S~~r~F~~ngvI~CMs~~~d~i~~~k~sav~R~SDDF~P~dP~sh~~Hi~~~AyN 477 (758)
T PLN02355 398 ILETLGAGHGGRVKLARKYHQALEASIARNFPDNGIISCMSHNTDGLYSAKRTAVIRASDDFWPRDPASHTIHIASVAYN 477 (758)
T ss_pred hHHHhhcCCCcHHHHHHHHHHHHHHHHHHhCCCCceEEecccCchhhcccccceeeeeccccccCCCccCchhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCccccccccccHHHHHHHHHhcCCcEEEecCCCCCcHHhhhhhcCCCCceeeeccCCCCCccccccccCC
Q 046494 446 SLLLGEIVVPDWDMFQSKHETAEFHATARALGGCAVYVSDKPGVHDFKILKRLVLPDGSVLRARHAGRPTRDCLFEDPVM 525 (724)
Q Consensus 446 sl~~g~~~~pDwDMf~s~h~~a~~HaaaraisggPvyisD~pg~hd~~lL~~lv~pdG~ilR~~~pg~pt~d~lf~dp~~ 525 (724)
|||+|+++|||||||||.||+|+|||++||||||||||||+||+||++||||||+|||+||||++||+|||||||.||++
T Consensus 478 SLllg~~v~PDWDMF~S~hp~A~~HAaaRAisGGPIYvSD~PG~hdf~LLk~LvlpdGsIlR~~~pg~PtrDclF~Dp~~ 557 (758)
T PLN02355 478 TIFLGEFMQPDWDMFHSLHPMAEYHAAARAVGGCAIYVSDKPGQHDFNLLKKLVLPDGSILRAKLPGRPTRDCLFSDPAR 557 (758)
T ss_pred hhhhccccccCcccceecCccHHHHHHHHhccCCcEEEecCCCCccHHHHHhhhCCCCceeccccCCCcchhhhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceEEEEeecCcceEEEEeecCCCCCCCcccccccCCC-CCCceeeeecCCchhhhhhhcCCCCCCcEEEEEeccceE
Q 046494 526 DGKSLLKIWNLNKLSGVIGVFNCQGAGSWPMKEDMHRKPA-SPLSISGHVCPLDIEFLERVAGENWNGDCAVYAFNSGVL 604 (724)
Q Consensus 526 d~~~lLki~n~~~~~gvlg~FN~~~~g~w~~~~~~~~~~~-~~~~~~~~v~~~D~~~~~~~a~~~~~~~~~vy~~~~g~~ 604 (724)
|++++|||||+|+++||||+|||||+| ||+++++|++|+ ++.++++.+++.|++++.++++++|+++++||+|++|++
T Consensus 558 dg~slLKIwn~nk~sGviG~FNcqGag-w~~~~~~~~~~~~~~~~l~~~v~~~Dv~~~~~~a~~~w~~~~~vy~~~sg~l 636 (758)
T PLN02355 558 DGKSLLKIWNLNEFTGVIGVFNCQGAG-WCRVGKKNLIHDEQPGTITGVIRAKDVDYLPKVADDEWTGDSIVYSHLGGEV 636 (758)
T ss_pred CCceEEEEEEcCCcccEEEEEeccCCc-ccchhccccccCCCCceeEEEEccccccchhhccccCCCCCeEEEEecCceE
Confidence 999999999999999999999999999 999999999999 999999999999999999999989999999999999999
Q ss_pred EecCCCCceEEEecCCceEEEEEeeeeEecCceeEEEeeehhhccCCcceeEEEEEEeCceeEEEEEeeecceeEEEecC
Q 046494 605 TKLPKKGNLEVSLATLKCEIYTICPIRVLGQDLLFAPIGLLDMYNSGGAVESFEYIMDLSKYIIKIKGKGCGRFGAYSSS 684 (724)
Q Consensus 605 ~~l~~~~~~~v~L~~~~~ei~t~~Pv~~~~~~~~~A~iGL~~~~~~~~av~~~~~~~~~~~~~~~v~vkg~G~~g~YsS~ 684 (724)
+++++++.++|+|++++|||||++||+.+.++++||||||+||||++|||+++++..+ ++.+++|+|||||+||+|+|.
T Consensus 637 ~~~~~~~~~~vtL~~~~~eiftv~Pi~~~~~~~~fApIGL~~m~nsggAV~~~~~~~~-~~~~v~v~vkg~G~~g~YsS~ 715 (758)
T PLN02355 637 VYLPKDASLPVTLKSREYEVFTVVPVKELSNGVKFAPIGLVKMFNSGGAIKELRYDED-TNATVRMKVRGSGLVGAYSSS 715 (758)
T ss_pred EecCCCCceEEEecCCceEEEEEeeEEEecCCcEEEEeehhhhccCcceEEEEEeecc-cccEEEEEEEecceEEEEecC
Confidence 9998899999999999999999999999998999999999999999999999998753 567899999999999999999
Q ss_pred CCceEeecCeeeeeEEeCCCcEEEEEcCC-CCceeeEEeeC
Q 046494 685 KPKCCMVDTKEEEFTYNAEDGLLTVKLPG-ECTLRDIEFVY 724 (724)
Q Consensus 685 ~P~~~~vdg~~~~f~y~~~~glltv~lp~-~~~~~~~~~~~ 724 (724)
+|++|.|||++++|+|++++|||+|+||| ++++++|.|||
T Consensus 716 ~P~~c~vd~~~~~f~y~~~~g~~~~~~~~~~~~~~~~~~~~ 756 (758)
T PLN02355 716 RPRRVTVDSKEVEFRYEEGSGLVTFDLGVPEEELYLWNVTV 756 (758)
T ss_pred CCcEEEECCeEeeeEEcCCCCeEEEEcCCCcccCceeEEEE
Confidence 99999999999999999999999999998 88889999985
No 4
>PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds
Probab=100.00 E-value=6e-204 Score=1700.90 Aligned_cols=704 Identities=39% Similarity=0.731 Sum_probs=666.8
Q ss_pred ceEEEeeCceEEEcCeecccCCCCceEEcc------------------------ceeeccccCCCCCCceEEeccccCCC
Q 046494 5 AKATIIKDGCLMVRGNVVLTGVPQNVVVSP------------------------SSFIGATSAAPPSSRHVFTLGVLPDG 60 (724)
Q Consensus 5 ~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~------------------------~~~~g~~~~~~~~~~~~~~lG~~~~~ 60 (724)
..|+| +||+|+|+|+++|++||+||++|| .+||||+++ +++|||+++||++ ++
T Consensus 22 ~~~~l-~~g~l~v~G~~~L~~Vp~NV~~tp~s~~~~~~~~p~~~~~~~~~~~~~g~FlG~~~~-~~~srhv~~lG~l-~~ 98 (865)
T PLN02982 22 NYFDL-SDGKLSVKGVPLLSDVPNNVTFTPFSSISISSDAPLPLLQRVQSNSHKGGFLGFTKE-SPSDRLTNSLGKF-EG 98 (865)
T ss_pred ceeEe-cCCeEEECCEEeecCCCCceEecCcccccccccCccccccccccccccceEEeeecC-CCccceeeecccc-cC
Confidence 47899 999999999999999999999999 269999999 9999999999999 99
Q ss_pred ceEEEEeeeccCccccccCCCCCCCCccceEEEEeecCCCCCcccCCCCCcEEEEEEEeecCceEEEEecCCCCcEEEEE
Q 046494 61 YRFLCLFRFKIWWMIPRVGKSASEVPMETQMLLLEAREDSPLDADAASDNTFYILLLPVLDGQFRATLQGTPTNDLQFCV 140 (724)
Q Consensus 61 ~r~~al~R~k~~W~~pr~G~~~~~~~~etq~~l~e~~~~~~l~~~~~~~~~~y~v~Lpls~g~~ra~l~~~~~~~~~i~~ 140 (724)
+|||||||||+|||+||+|++++|||.||||+|+|.+++. .|+|+||+++|.|||+||++.+++++||+
T Consensus 99 ~rFms~FRfK~WWmt~~vG~~G~Dip~ETQ~llle~~~~~-----------~Yvv~lP~ieG~FRa~Lqg~~~~~~~ic~ 167 (865)
T PLN02982 99 RDFLSIFRFKTWWSTMWIGSSGSDLQMETQWVLLKVPEID-----------SYVLIIPLIEGSFRSALHPGEDGHVMICA 167 (865)
T ss_pred ceEEeeeehhhhccchhhcCCCCCCChhheEEEEEcCCCc-----------eEEEEEEecCCceEEEecCCCCCCEEEEE
Confidence 9999999999999999999999999999999999999632 69999999999999999999999999999
Q ss_pred EcCCccccccccceEEEEEecCChhHHHHHHHHHHHHhcCcCCCccccccCcccccccccchhhhhhccCHHHHHHHHHH
Q 046494 141 ESGDSSVQTSEAFEAVFINSGDNPFELIKDSIKILEKHKGTFSHLENKKIPRHLDWFGWCTWDAFYKQVNPQGIKEGLHS 220 (724)
Q Consensus 141 ~sg~~~~~~~~~~~~v~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~~~~GWcTW~af~~~vte~~I~~~l~~ 220 (724)
|||++.|+++++..++|||+|+|||++|++|++++|+|++||+++++|++|.++|+||||||||||++||+++|++++++
T Consensus 168 ESg~~~V~~s~~~~~~yvh~g~nPy~li~~a~~~v~~hl~TF~~~eeK~~P~~vd~FGWCTWDAFY~~V~p~GV~~Gv~~ 247 (865)
T PLN02982 168 ESGSTKVKASSFNSIAYVHVSDNPYNLMKEAYSALRVHLNTFRLLEEKALPKIVDKFGWCTWDAFYLTVDPVGVWHGVKE 247 (865)
T ss_pred ecCCccccccccceEEEEecCCCHHHHHHHHHHHHHHHhcccchhhhccCccccccceEEeechhhcccCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCCCCcEEEEecCcCcCccCCCC----CCCCccccccccccccccccCCCCCCCCC---------------------
Q 046494 221 FLEGGCSPRFLVIDDGWQETINEFCK----DGEPLIEGTQFAIRLVDIKENCKFNSSGS--------------------- 275 (724)
Q Consensus 221 l~~~Gi~~~~viIDDGWQ~~~~d~~~----~~~~~~~~~~~~~~L~~~~~n~KFP~~~~--------------------- 275 (724)
|+++|+||+|||||||||++..|.++ .++.+.+|+||++||+.|++|+||++++.
T Consensus 248 l~~gG~pprfvIIDDGWQsi~~d~~~~~~~~~~~~~~g~q~~~RL~~~~En~KFrky~~~~~~~~~~~~f~~~~~~~~i~ 327 (865)
T PLN02982 248 FAEGGVPPRFLIIDDGWQSINFDGDNPNEDAKNLVLGGTQMTARLYRFDECEKFRNYKGGSMLGPDPPHFDPKKPKMLIY 327 (865)
T ss_pred HhcCCCCccEEEEecchhhccccccCCchhhhhccccccchhhhhhcchhhhhhhccccccccCCCcccccccccchhhh
Confidence 99999999999999999999876332 34678899999999999999999996310
Q ss_pred ----------------------------------------------------------CCCCCcHHHHHHHHHHHcC-Cc
Q 046494 276 ----------------------------------------------------------DNSCNDLHEFIDEIKEKYG-LK 296 (724)
Q Consensus 276 ----------------------------------------------------------~~~~~GLk~lv~~Ik~~~G-lk 296 (724)
+..+.|||++|+.||+||+ ||
T Consensus 328 ~~~~~~~a~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Glk~~v~~ik~k~~~vk 407 (865)
T PLN02982 328 KAIEREHAEKARKKAIESGVTDLSEFDAKIKQLKKELDAMFDGEEKSVSSESESSGSCKVSGSGMKAFTRDLRTKFKGLD 407 (865)
T ss_pred cccchhhhhhcccccccccccccchhhhhhhhhhhhccccccccccccccccccccccccCcccHHHHHHHHHHhCCCCC
Confidence 2345799999999999995 99
Q ss_pred eEEeeeccccccCCCCCCchhhhh----------------hhhccccccCCccccChhHHHHHHHHHHHHHhhcCCCEEE
Q 046494 297 YVYMWHALAGYWGGVLPSSDIMKK----------------DIAMDSLEKYGVGIIDPQKIFDFYNDLHSYLANSGVDGVK 360 (724)
Q Consensus 297 ~vgvWhal~GYWgGi~P~s~~~~~----------------d~~~~~~~~~G~g~v~p~da~~fy~~~~~~Las~GVD~VK 360 (724)
||||||||+||||||+|+++.++. |++++.+..+|+++++|+++++||++||+||+++|||+||
T Consensus 408 ~VyVWHAL~GYWGGV~P~~~~y~~k~~~p~~spg~~~~~~d~a~d~i~~~G~glv~P~~~~~FYd~~hsyLas~GVDgVK 487 (865)
T PLN02982 408 DIYVWHALCGAWGGVRPGTTHLNAKVVPARLSPGLDGTMNDLAVDKIVEGGIGLVHPSQAGDFYDSMHSYLASVGITGVK 487 (865)
T ss_pred EEEEeeeccCcccCcCCCCCCCcceEEecccCccccccCcchhhhheecCceeccCHHHHHHHHHHHHHHHHHcCCCeEE
Confidence 999999999999999999754432 8888999999999999999999999999999999999999
Q ss_pred EccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeeccCCCcccc-cccccceEeecCCCCCCCcchhh---
Q 046494 361 VDVQSLMETLGSGYGGRVLLTRQYQQALEQSVAWNFKDNNLICCMSHNSYSLY-SSMKSAVARASEDFMPGEPTFQT--- 436 (724)
Q Consensus 361 vD~q~~l~~l~~~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cMs~~~~~~~-~~~~~~~~R~SdDf~p~~p~~~~--- 436 (724)
||+|++++++++++++|++++++||+||++|+++||++|++|+||||+++++| +.++.++.|+||||||++|++|+
T Consensus 488 VDvQ~~Le~L~~~~ggRv~La~ay~~al~~Sv~r~F~~ng~I~CM~~~~~~~~~~tk~sav~R~SDDF~p~dP~shp~g~ 567 (865)
T PLN02982 488 VDVIHTLEYVCEEYGGRVELAKAYYDGLSESLAKNFNGTGIIASMQQCNDFFFLGTKQISMGRVGDDFWFQDPNGDPMGV 567 (865)
T ss_pred EchhhhHHHhhccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEeecccCchhhhccCCcceeeeccccccCCCCCcCcccc
Confidence 99999999999999999999999999999999999999999999999999888 56788999999999999999988
Q ss_pred -----HHHHHHHHhhhhccCCCCCCccccccccccHHHHHHHHHhcCCcEEEecCCCCCcHHhhhhhcCCCCceeeeccC
Q 046494 437 -----LHIASVAFNSLLLGEIVVPDWDMFQSKHETAEFHATARALGGCAVYVSDKPGVHDFKILKRLVLPDGSVLRARHA 511 (724)
Q Consensus 437 -----~hi~~~a~nsl~~g~~~~pDwDMf~s~h~~a~~HaaaraisggPvyisD~pg~hd~~lL~~lv~pdG~ilR~~~p 511 (724)
+||++|||||||||+++|||||||||.|++|+|||++||||||||||||+||+||++||||||+|||+||||++|
T Consensus 568 ~wlq~~Hi~~~AyNSLl~G~~v~PDWDMFqS~H~~A~fHAaaRAIsGGPIYvSD~pG~Hdf~lLk~LvlpDG~IlR~~~p 647 (865)
T PLN02982 568 YWLQGVHMIHCAYNSMWMGQIIQPDWDMFQSDHLCAEFHAGSRAICGGPVYVSDSVGGHDFDLLKKLVFPDGTIPRCQHY 647 (865)
T ss_pred ccccceeeeehhhhhHhhccccccCchhccccCchHHHHHHHHhhcCCCEEEeeCCCCccHHHHHhhhcCCCceeccCCC
Confidence 499999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccccCCCCcceEEEEeecCcceEEEEeecCCCCCCCcccccccCCC-CCCceeeeecCCchhhhh--hhcCC
Q 046494 512 GRPTRDCLFEDPVMDGKSLLKIWNLNKLSGVIGVFNCQGAGSWPMKEDMHRKPA-SPLSISGHVCPLDIEFLE--RVAGE 588 (724)
Q Consensus 512 g~pt~d~lf~dp~~d~~~lLki~n~~~~~gvlg~FN~~~~g~w~~~~~~~~~~~-~~~~~~~~v~~~D~~~~~--~~a~~ 588 (724)
|+|||||||.||++|++++|||||+|+++||||+|||||+| ||++++++++|+ ++.++|+.|+++|+++.. +.++.
T Consensus 648 g~PTrDcLF~DPl~DGks~LKIWN~Nk~~GViG~FNCQGag-W~~~~~~~~~~~~~~~~vtg~v~~~Dve~~~~~~~a~~ 726 (865)
T PLN02982 648 ALPTRDCLFKNPLFDKKTILKIWNFNKFGGVIGAFNCQGAG-WDPKEHRIKGYSECYKPVSGSVHVSDIEWDQKPEASQM 726 (865)
T ss_pred CCCCcchhccCcccCCceEEEEEeccCcCceEEEEEeccCC-CCchhccccccCCCCcceEEEEcHHHcccccccccccC
Confidence 99999999999999999999999999999999999999998 999999999999 999999999999999884 55667
Q ss_pred CCCCcEEEEEeccceEEecCC-CCceEEEecCCceEEEEEeeeeEecCceeEEEeeehhhccCCcceeEEEEEEeCceeE
Q 046494 589 NWNGDCAVYAFNSGVLTKLPK-KGNLEVSLATLKCEIYTICPIRVLGQDLLFAPIGLLDMYNSGGAVESFEYIMDLSKYI 667 (724)
Q Consensus 589 ~~~~~~~vy~~~~g~~~~l~~-~~~~~v~L~~~~~ei~t~~Pv~~~~~~~~~A~iGL~~~~~~~~av~~~~~~~~~~~~~ 667 (724)
+|+++++||+|+++++.++.+ ++.++|+|++++|||||++||+.+.++++||||||+||||+||||+++++..++++.+
T Consensus 727 ~~~~~~~vY~~~~~el~~~~~~~~~~~vtL~~~e~elftv~PI~~~~~~i~FApIGL~nM~NSgGAV~~~~~~~~g~~~~ 806 (865)
T PLN02982 727 GEAEEYAVYLNQAEELLLMTPKSEAIQITLQPSSFELFSFVPVTKLGSSAKFAPIGLTNMFNSGGTIQEMEYGESGGECS 806 (865)
T ss_pred CCcccEEEEEecCceEEEecCCCCcceEEeccceeEEEEEeeeEEccCCcceeeeehHhhccCCceeEEeeeccCCccce
Confidence 799999999999999999654 7999999999999999999999999899999999999999999999999864334567
Q ss_pred EEEEeeecceeEEEecCCCceEeecCeeeeeEEeCCCcEEEEEcCC-CCceeeEEeeC
Q 046494 668 IKIKGKGCGRFGAYSSSKPKCCMVDTKEEEFTYNAEDGLLTVKLPG-ECTLRDIEFVY 724 (724)
Q Consensus 668 ~~v~vkg~G~~g~YsS~~P~~~~vdg~~~~f~y~~~~glltv~lp~-~~~~~~~~~~~ 724 (724)
++|+|||+|+|++|||.+|++|.|||++++|+|+++ |+|+|+||| +++.+.|.|||
T Consensus 807 v~v~VrG~G~f~~Yss~~P~~c~vdg~ev~F~y~~~-g~l~~~lp~~~~~~~~~~v~~ 863 (865)
T PLN02982 807 VKVKVKGGGRFLAYSSEAPKKCYLNGKEVGFEWEEE-GKLSFFVPWTEESGGISDVSF 863 (865)
T ss_pred EEEEEEecceEEEEecCCCeEEEECCeEeeeEECCC-CeEEEEccCCcccCceeeEEE
Confidence 999999999999999999999999999999999997 999999999 88889999885
No 5
>PLN02711 Probable galactinol--sucrose galactosyltransferase
Probab=100.00 E-value=1.3e-202 Score=1696.41 Aligned_cols=706 Identities=41% Similarity=0.763 Sum_probs=663.2
Q ss_pred CcccceEEEeeCceEEEcCeecccCCCCceEEccc--------------eeeccccCCCCCCceEEeccccCCCceEEEE
Q 046494 1 MTVTAKATIIKDGCLMVRGNVVLTGVPQNVVVSPS--------------SFIGATSAAPPSSRHVFTLGVLPDGYRFLCL 66 (724)
Q Consensus 1 ~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~--------------~~~g~~~~~~~~~~~~~~lG~~~~~~r~~al 66 (724)
||+++.|+| +||+|+|+|+++|++||+||++||+ +||||+++ +++|||+++||++ +++|||||
T Consensus 18 ~~~~~~~~l-~~~~l~v~g~~~l~~vp~nv~~tp~~~~~~~~~~~~~~g~flG~~~~-~~~srhv~~~G~l-~~~rfm~~ 94 (777)
T PLN02711 18 GLNPSLITL-EGSNFLANGHPFLSDVPDNITLTPSPYLPDNKPITVGAGSFVGFDAG-EPKSRHVVPIGKL-KNIRFMSI 94 (777)
T ss_pred ccccceEEE-eCCeEEECCEEeecCCCCceEecCCCCcccccccccccceEEeeecC-CCCcceeeecccc-cCcEeeee
Confidence 899999999 9999999999999999999999986 69999999 9999999999999 99999999
Q ss_pred eeeccCccccccCCCCCCCCccceEEEEeecCCCCCcccCCCCCcEEEEEEEeecCceEEEEecCCCCcEEEEEEcCCcc
Q 046494 67 FRFKIWWMIPRVGKSASEVPMETQMLLLEAREDSPLDADAASDNTFYILLLPVLDGQFRATLQGTPTNDLQFCVESGDSS 146 (724)
Q Consensus 67 ~R~k~~W~~pr~G~~~~~~~~etq~~l~e~~~~~~l~~~~~~~~~~y~v~Lpls~g~~ra~l~~~~~~~~~i~~~sg~~~ 146 (724)
||||+|||+||+|++++|||.||||||+|.+++. +.|+|+|||++|+|||+||++.+++++||+|||++.
T Consensus 95 fRfK~WWmt~~~G~~g~dip~eTQ~ll~e~~~~~----------~~y~~~lP~~eg~fRa~Lq~~~~d~~~ic~esg~~~ 164 (777)
T PLN02711 95 FRFKVWWTTHWVGSNGRDVENETQMMILDKSDSG----------RPYVLLLPLIEGPFRASLQPGEDDNVDICVESGSTK 164 (777)
T ss_pred ehhhhhccchhhcCCCCCCChhheEEEEEccCCC----------ceEEEEEeecCCceEEEecCCCCCcEEEEEecCCcc
Confidence 9999999999999999999999999999998521 269999999999999999999999999999999999
Q ss_pred ccccccceEEEEEecCChhHHHHHHHHHHHHhcCcCCCccccccCcccccccccchhhhhhccCHHHHHHHHHHHHHCCC
Q 046494 147 VQTSEAFEAVFINSGDNPFELIKDSIKILEKHKGTFSHLENKKIPRHLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGC 226 (724)
Q Consensus 147 ~~~~~~~~~v~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi 226 (724)
++++++.+++|||+|+|||++|++|++++++|++||++|++|++|.++|+||||||||||++|||++|++++++|+++|+
T Consensus 165 v~~~~~~~~~~i~~g~~Py~~i~~A~~~~~~~l~tf~~reeK~~P~~~D~fGWCTWdAfy~~Vt~egI~~gl~~L~~~Gi 244 (777)
T PLN02711 165 VCGSEFRSVLYMHAGDDPYKLVKDAMKVVRVHLGTFKLLEEKTPPGIVDKFGWCTWDAFYLTVHPQGVWEGVKGLVDGGC 244 (777)
T ss_pred eeccccceEEEEEcCCCHHHHHHHHHHHHHHHhcccchhhhccCCcccccceEEehhHhcccCCHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEecCcCcCccCCC-----CCCCCccccccccccccccccCCCCCCCC--CCCCCCcHHHHHHHHHHHcC-CceE
Q 046494 227 SPRFLVIDDGWQETINEFC-----KDGEPLIEGTQFAIRLVDIKENCKFNSSG--SDNSCNDLHEFIDEIKEKYG-LKYV 298 (724)
Q Consensus 227 ~~~~viIDDGWQ~~~~d~~-----~~~~~~~~~~~~~~~L~~~~~n~KFP~~~--~~~~~~GLk~lv~~Ik~~~G-lk~v 298 (724)
|++|||||||||+++++.+ +.++...+|+||.+||++|++|.|||+.. +..+|.|||++|+.||+||+ ||||
T Consensus 245 p~~~vIIDDGWQsi~~d~~~~~~~~~~~~~~~g~q~~~rL~~f~en~KF~~~~~~~~~~p~Glk~~v~~iK~~~~~vk~V 324 (777)
T PLN02711 245 PPGLVLIDDGWQSICHDEDPISDQEGMNRTVAGEQMPCRLLKFEENYKFRDYVSPKSLSNKGMGAFIRDLKEEFKTVDYV 324 (777)
T ss_pred CccEEEEcCCcccccccCcccccccccccccccchhhhhhccccccccccccccccCCCCCcHHHHHHHHHhhCCCCCEE
Confidence 9999999999999877633 23567788999999999999999999532 34678999999999999985 9999
Q ss_pred EeeeccccccCCCCCCchhhh-----------------hhhhccccccCCccccChhHHHHHHHHHHHHHhhcCCCEEEE
Q 046494 299 YMWHALAGYWGGVLPSSDIMK-----------------KDIAMDSLEKYGVGIIDPQKIFDFYNDLHSYLANSGVDGVKV 361 (724)
Q Consensus 299 gvWhal~GYWgGi~P~s~~~~-----------------~d~~~~~~~~~G~g~v~p~da~~fy~~~~~~Las~GVD~VKv 361 (724)
||||||+||||||+|++++++ +|++++.+..+|+++++|+++++||++||+||+++|||||||
T Consensus 325 yVWHAL~GYWGGv~P~~~~~~~~~~~~p~~spg~~~~~~d~~~d~~~~~g~glv~Pe~~~~FY~~~hs~Las~GVDgVKV 404 (777)
T PLN02711 325 YVWHALCGYWGGLRPNVPGLPESKVVAPKLSPGLKMTMEDLAVDKIVNNGVGLVPPELAYQMYEGLHSHLQSVGIDGVKV 404 (777)
T ss_pred EEeeeccCcccCcCCCCCCCccceeeccccCcccccccccccccccccCcccccCHHHHHHHHHHHHHHHHHcCCCeEEE
Confidence 999999999999999986642 167778888899999999999999999999999999999999
Q ss_pred ccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeeccCCCccccc-ccccceEeecCCCCCCCcchhh----
Q 046494 362 DVQSLMETLGSGYGGRVLLTRQYQQALEQSVAWNFKDNNLICCMSHNSYSLYS-SMKSAVARASEDFMPGEPTFQT---- 436 (724)
Q Consensus 362 D~q~~l~~l~~~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cMs~~~~~~~~-~~~~~~~R~SdDf~p~~p~~~~---- 436 (724)
|+|+.++++++++++|++++++||+||++|++|||+++++|+||||+++++|+ +++.++.|+||||||++|++|+
T Consensus 405 DvQ~~Le~l~~~~Ggrv~la~ay~~ALe~S~~r~F~~ng~I~CMs~~~d~~~~~tk~~av~R~SDDF~p~dP~sh~~g~~ 484 (777)
T PLN02711 405 DVIHLLEMLCEEYGGRVELAKAYYKALTASVRKHFNGNGVIASMEHCNDFMFLGTEAISLGRVGDDFWCTDPSGDPNGTF 484 (777)
T ss_pred chhhhHhhhcccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEeecccCchhhhccCcccceeeecccccCCCCcccccccc
Confidence 99999999998899999999999999999999999999999999999998885 5788999999999999999998
Q ss_pred ----HHHHHHHHhhhhccCCCCCCccccccccccHHHHHHHHHhcCCcEEEecCCCCCcHHhhhhhcCCCCceeeeccCC
Q 046494 437 ----LHIASVAFNSLLLGEIVVPDWDMFQSKHETAEFHATARALGGCAVYVSDKPGVHDFKILKRLVLPDGSVLRARHAG 512 (724)
Q Consensus 437 ----~hi~~~a~nsl~~g~~~~pDwDMf~s~h~~a~~HaaaraisggPvyisD~pg~hd~~lL~~lv~pdG~ilR~~~pg 512 (724)
.||++|||||||||+++|||||||||.||+|+|||++||||||||||||+||+||++||||||+|||+||||++||
T Consensus 485 W~~~~Hi~~~AyNSLllg~~v~PDWDMF~S~Hp~A~~HAaaRAisGGPIYVSD~pG~Hdf~LLk~LvlpdGsIlR~~~pg 564 (777)
T PLN02711 485 WLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDSVGKHNFPLLKRLVLPDGSILRCQYYA 564 (777)
T ss_pred ccccceeeeehhhhhhhcccccCCchhhhccCchHHHHHHHHhhcCCCEEEecCCCCccHHHHHhhhCCCCcEecccCCC
Confidence 4999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccccCCCCcceEEEEeecCcceEEEEeecCCCCCCCcccccccCCC-CCCceeeeecCCchhhhhhhcCCC--
Q 046494 513 RPTRDCLFEDPVMDGKSLLKIWNLNKLSGVIGVFNCQGAGSWPMKEDMHRKPA-SPLSISGHVCPLDIEFLERVAGEN-- 589 (724)
Q Consensus 513 ~pt~d~lf~dp~~d~~~lLki~n~~~~~gvlg~FN~~~~g~w~~~~~~~~~~~-~~~~~~~~v~~~D~~~~~~~a~~~-- 589 (724)
+|||||||.||++|++++|||||+|+++||||+|||||+| ||+++++|++|+ ++.++|+.|+++||++....++..
T Consensus 565 ~PtrDcLF~DP~~dg~slLKIwn~nk~tGviG~FNcqgag-W~~~~~~~~~~~~~~~~vt~~v~~~Dv~w~~~~~~~~~~ 643 (777)
T PLN02711 565 LPTRDCLFEDPLHDGKTMLKIWNLNKFTGVIGAFNCQGGG-WCRETRRNKCASQFSHTVTAKASPKDIEWNSGKSPISIE 643 (777)
T ss_pred CccchhhccccccCCceEEEEEeecCCcceEEEEEecCCc-ccchhhhcccccCCCCceEEEEchHHhcccCCCCCcCcc
Confidence 9999999999999999999999999999999999999999 999999999999 999999999999998764433221
Q ss_pred CCCcEEEEEeccceEEecCCCCceEEEecCCceEEEEEeeeeEecC-ceeEEEeeehhhccCCcceeEEEEEEeCceeEE
Q 046494 590 WNGDCAVYAFNSGVLTKLPKKGNLEVSLATLKCEIYTICPIRVLGQ-DLLFAPIGLLDMYNSGGAVESFEYIMDLSKYII 668 (724)
Q Consensus 590 ~~~~~~vy~~~~g~~~~l~~~~~~~v~L~~~~~ei~t~~Pv~~~~~-~~~~A~iGL~~~~~~~~av~~~~~~~~~~~~~~ 668 (724)
-.+.|+||+|++|++.++++++.++|+|++++|||||++||+.+.+ +++||||||+||||++|||+++++..+++ ++
T Consensus 644 ~~~~y~vy~~~s~~l~~l~~~~~l~vtL~~~~~Eiftv~Pv~~~~~~~~~fApIGL~~m~nsggAv~~~~~~~~~~--~v 721 (777)
T PLN02711 644 GVQVFAVYLFQSKKLVLSKPSENLEISLEPFNFELITVSPVTTLPGKSIQFAPIGLVNMLNTGGAIQSLAYDDAES--SV 721 (777)
T ss_pred CceeEEEEEecCCeEEECCCCCceEEEecCcceEEEEEeeeEEecCCCceEEecchhhhccCceeEEEEEeccCCC--eE
Confidence 2578999999999999999999999999999999999999999976 49999999999999999999999874444 58
Q ss_pred EEEeeecceeEEEecCCCceEeecCeeeeeEEeCCCcEEEEEcCCCCceeeEEeeC
Q 046494 669 KIKGKGCGRFGAYSSSKPKCCMVDTKEEEFTYNAEDGLLTVKLPGECTLRDIEFVY 724 (724)
Q Consensus 669 ~v~vkg~G~~g~YsS~~P~~~~vdg~~~~f~y~~~~glltv~lp~~~~~~~~~~~~ 724 (724)
+|+|||||+||+|+|.+|++|.|||++++|+|++ |||+|+|||.++.+.|.|||
T Consensus 722 ~v~vkg~G~lg~YsS~~P~~c~v~~~~~~f~y~~--g~~~~~~~~~~~~~~~~v~~ 775 (777)
T PLN02711 722 QIGVKGSGEMRVFASEKPRSCKIDGEEVEFGYED--CMVVVQVPWSGSSGLSLIEY 775 (777)
T ss_pred EEEEEeeeEEEEEecCCCeEEEECCEEeeeEecC--CEEEEEecCCCcCCceeEEE
Confidence 8999999999999999999999999999999998 99999999933448888885
No 6
>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins. Raffinose (O-alpha- D-galactopyranosyl- (1-->6)- O-alpha- D-glucopyranosyl-(1-->2)- O-beta- D-fructofuranoside) is a widespread oligosaccharide in plant seeds and other tissues. Raffinose synthase (2.4.1.82 from EC) is the key enzyme that channels sucrose into the raffinose oligosaccharide pathway [].
Probab=100.00 E-value=2.8e-196 Score=1660.44 Aligned_cols=691 Identities=56% Similarity=1.025 Sum_probs=657.4
Q ss_pred EEEeeCceEEEcCeecccCCCCceEEccc----------------eeeccccCCCCCCceEEeccccCCCceEEEEeeec
Q 046494 7 ATIIKDGCLMVRGNVVLTGVPQNVVVSPS----------------SFIGATSAAPPSSRHVFTLGVLPDGYRFLCLFRFK 70 (724)
Q Consensus 7 ~~~~~~g~~~~~~~~~l~~~~~~~~~~~~----------------~~~g~~~~~~~~~~~~~~lG~~~~~~r~~al~R~k 70 (724)
|+| +||+|+|+|+++|++||+||++||. +||||+++ +++|||+++||++ ++.|||||||||
T Consensus 1 ~~~-~~~~l~v~g~~~l~~vp~nv~~~~~~~~~~~~~~~~~~~~g~f~g~~~~-~~~sr~v~~lG~l-~~~rfm~~fRfK 77 (747)
T PF05691_consen 1 ISL-SDGNLVVNGRPILTGVPDNVTLTPASGSDAPPPVFAGAVDGAFLGFTAD-EPSSRHVFSLGKL-RGRRFMSLFRFK 77 (747)
T ss_pred CEe-cCCeeEECCEEeecCCCcceEeccCccccccccccccCCCceEEcccCC-CCCcceeEecccc-cCceeeehhhhh
Confidence 578 9999999999999999999999975 69999999 9999999999999 999999999999
Q ss_pred cCccccccCCCCCCCCccceEEEEeecCCCCCcccCCCCCcEEEEEEEeecCceEEEEecCCCCcEEEEEEcCCcccccc
Q 046494 71 IWWMIPRVGKSASEVPMETQMLLLEAREDSPLDADAASDNTFYILLLPVLDGQFRATLQGTPTNDLQFCVESGDSSVQTS 150 (724)
Q Consensus 71 ~~W~~pr~G~~~~~~~~etq~~l~e~~~~~~l~~~~~~~~~~y~v~Lpls~g~~ra~l~~~~~~~~~i~~~sg~~~~~~~ 150 (724)
+|||+||+|++++|||+||||||+|.+++++ +...|+|+|||++|+|||+||++++++++||+|||++.|.++
T Consensus 78 ~WWm~p~~G~~g~dip~eTQ~ll~e~~~~~~-------~~~~Y~vlLPl~eg~FRa~Lqg~~~~~l~i~veSg~~~v~~s 150 (747)
T PF05691_consen 78 LWWMTPRMGTSGRDIPMETQFLLLESPDDSD-------EGAPYVVLLPLLEGSFRASLQGGEDDELEICVESGDPAVQTS 150 (747)
T ss_pred hhccccccCCCcccCChhhheeeeecCcccC-------CccceEEEEEEecCceeeeeccCCCCcEEEEEecCCCccccc
Confidence 9999999999999999999999999995321 234899999999999999999999999999999999999999
Q ss_pred ccceEEEEEecCChhHHHHHHHHHHHHhcCcCCCccccccCcccccccccchhhhhhccCHHHHHHHHHHHHHCCCCCcE
Q 046494 151 EAFEAVFINSGDNPFELIKDSIKILEKHKGTFSHLENKKIPRHLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPRF 230 (724)
Q Consensus 151 ~~~~~v~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~~ 230 (724)
++..++||++|+|||++|++|++++++|++||++|++|++|.++|+||||||||||++||+++|++++++|+++|+|++|
T Consensus 151 ~~~~~l~v~~g~dPy~~i~~A~~~~~~~l~tf~~r~~K~~P~~~d~lGwCTWdaf~~~v~~~~i~~~l~~L~~~gi~~~~ 230 (747)
T PF05691_consen 151 SFDHALYVHAGDDPYELIREAVKAVRKHLGTFRLREEKKYPEFLDGLGWCTWDAFYQDVTEEGILEGLKSLEEGGIPPRF 230 (747)
T ss_pred cCceEEEEeccCCHHHHHHHHHHHHHhcccccccccccchhhhhhhhccccHHHhccccCHHHHHHHHHHHHhCCCCceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCcCcCccCCC----CCCCCccccccccccccccccCCCCCCCC----CCCCCCcHHHHHHHHHHHc-CCceEEee
Q 046494 231 LVIDDGWQETINEFC----KDGEPLIEGTQFAIRLVDIKENCKFNSSG----SDNSCNDLHEFIDEIKEKY-GLKYVYMW 301 (724)
Q Consensus 231 viIDDGWQ~~~~d~~----~~~~~~~~~~~~~~~L~~~~~n~KFP~~~----~~~~~~GLk~lv~~Ik~~~-Glk~vgvW 301 (724)
||||||||+++++++ +.++...+|+||.+||++|++|.||.... +++++.|||++|++||++| ||||||||
T Consensus 231 viIDDGWQ~~~~~~~~~~~~~~~~~~~g~q~~~rl~~~~en~kF~~~~~~~~~~~~~~GL~~~V~~ik~~~~~Ik~V~VW 310 (747)
T PF05691_consen 231 VIIDDGWQSVDNDGDDPSKDGMNLVQEGAQFPRRLTDFKENSKFRAYKSGKSPEAFPSGLKHFVSDIKEKFPGIKYVYVW 310 (747)
T ss_pred EEEecchhcccccCcccccccccccccccccchhhhhhhhhhhhhhccCCCcccCCcccHHHHHHHHHhhCCCCCEEEEe
Confidence 999999999998866 33467788999999999999999999543 2468999999999999999 89999999
Q ss_pred eccccccCCCCCCchhhhh-----------------hhhccccccCCccccChhHHHHHHHHHHHHHhhcCCCEEEEccc
Q 046494 302 HALAGYWGGVLPSSDIMKK-----------------DIAMDSLEKYGVGIIDPQKIFDFYNDLHSYLANSGVDGVKVDVQ 364 (724)
Q Consensus 302 hal~GYWgGi~P~s~~~~~-----------------d~~~~~~~~~G~g~v~p~da~~fy~~~~~~Las~GVD~VKvD~q 364 (724)
|||+||||||+|++....+ |++++.+..+|+++++|+++++||++||+||+++||||||||+|
T Consensus 311 HAL~GYWgGi~P~~~~~~~~k~~~~~~spg~~~~~~d~~~d~~~~~g~glv~p~~~~~FYd~~hsyL~s~GVDgVKVD~Q 390 (747)
T PF05691_consen 311 HALCGYWGGISPDGMLAYNYKLVYPKLSPGLQGNMPDLAVDSIVKGGLGLVDPEDAFRFYDDFHSYLASAGVDGVKVDVQ 390 (747)
T ss_pred ehhcceecCcCCCCccccccceeecccCCcccccCccccccccccCcccccCHHHHHHHHHHHHHHHHHcCCCEEEEchh
Confidence 9999999999997643111 66777788899999999999999999999999999999999999
Q ss_pred cchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeeccCCCccccc-ccccceEeecCCCCCCCcch--------h
Q 046494 365 SLMETLGSGYGGRVLLTRQYQQALEQSVAWNFKDNNLICCMSHNSYSLYS-SMKSAVARASEDFMPGEPTF--------Q 435 (724)
Q Consensus 365 ~~l~~l~~~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cMs~~~~~~~~-~~~~~~~R~SdDf~p~~p~~--------~ 435 (724)
+.+++++.++++|++++++||+||++|+++||+++++|+||||+++++|+ .+..+++|+||||||++|++ |
T Consensus 391 ~~l~~l~~~~ggrv~la~ay~~AL~~S~~r~F~~~~vI~CMsh~~~~l~~~~~~~av~R~SDDF~P~~p~s~p~g~~w~h 470 (747)
T PF05691_consen 391 AILETLGEGYGGRVELARAYQDALEASVARHFSGNGVINCMSHNPDNLYHSTKQSAVVRNSDDFFPRDPASDPNGVFWLH 470 (747)
T ss_pred hhhhhhhccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCccchhcccccccceeccccccCCCCCCCccccchhh
Confidence 99999998899999999999999999999999999999999999999999 78889999999999999999 9
Q ss_pred hHHHHHHHHhhhhccCCCCCCccccccccccHHHHHHHHHhcCCcEEEecCCCCCcHHhhhhhcCCCCceeeeccCCCCC
Q 046494 436 TLHIASVAFNSLLLGEIVVPDWDMFQSKHETAEFHATARALGGCAVYVSDKPGVHDFKILKRLVLPDGSVLRARHAGRPT 515 (724)
Q Consensus 436 ~~hi~~~a~nsl~~g~~~~pDwDMf~s~h~~a~~HaaaraisggPvyisD~pg~hd~~lL~~lv~pdG~ilR~~~pg~pt 515 (724)
++||++||||+||+++++|||||||||.||+|+|||++||||||||||||+||+||++|||||++|||+||||++||+||
T Consensus 471 ~~Hi~~nAyNsL~~g~~~~PDwDMF~S~h~~A~~HAaaRaiSGGPVYiSD~pG~hd~~LLk~LvlpDG~ilR~~~pg~Pt 550 (747)
T PF05691_consen 471 TWHIAHNAYNSLLLGQFVWPDWDMFQSSHPAAEFHAAARAISGGPVYISDKPGKHDFDLLKKLVLPDGSILRADHPGRPT 550 (747)
T ss_pred HHHHHHHHHHHHHHHhhcCCCcccccccCccHHHHHHHHhhcCCCEEEeeCCCCCCHHHHHHhhCCCCceeccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCcceEEEEeecCcceEEEEeecCCCCCCCcccccccCCC-CCCceeeeecCCchhhhhhhcC--CCCCC
Q 046494 516 RDCLFEDPVMDGKSLLKIWNLNKLSGVIGVFNCQGAGSWPMKEDMHRKPA-SPLSISGHVCPLDIEFLERVAG--ENWNG 592 (724)
Q Consensus 516 ~d~lf~dp~~d~~~lLki~n~~~~~gvlg~FN~~~~g~w~~~~~~~~~~~-~~~~~~~~v~~~D~~~~~~~a~--~~~~~ 592 (724)
|||||.||++|++++|||||+|+++||||+|||||+| ||++++++++|+ +|+++|+.|+++|++++.++++ .+|++
T Consensus 551 ~d~Lf~dp~~d~~~lLKi~n~n~~~gvig~FN~qgag-w~~~~~~~~~~~~~~~~~t~~v~~~Dv~~~~~~~~~~~~~~~ 629 (747)
T PF05691_consen 551 RDCLFEDPLRDGKSLLKIWNLNKFTGVIGVFNCQGAG-WCREERKNKSHDECPGTLTGSVRPSDVEWISEVAGADDGWNG 629 (747)
T ss_pred hhhhcccCCCCCceeEEEEecCCccceEEEEecCCCc-ccchhhhccccCCCCcceEeeccccccceeccccccCcCCCc
Confidence 9999999999999999999999999999999999999 999999999999 9999999999999999998887 67999
Q ss_pred cEEEEEeccceEEecC-CCCceEEEecCCceEEEEEeeeeEecC-ceeEEEeeehhhccCCcceeEEEEEEeCceeEEEE
Q 046494 593 DCAVYAFNSGVLTKLP-KKGNLEVSLATLKCEIYTICPIRVLGQ-DLLFAPIGLLDMYNSGGAVESFEYIMDLSKYIIKI 670 (724)
Q Consensus 593 ~~~vy~~~~g~~~~l~-~~~~~~v~L~~~~~ei~t~~Pv~~~~~-~~~~A~iGL~~~~~~~~av~~~~~~~~~~~~~~~v 670 (724)
+|+||+|+++++.+++ ++++++|+|++++|||||++||+.+.+ +++||||||+||||+||||+++++..+ ...|+|
T Consensus 630 ~~avY~~~~~~l~~l~~k~~~~~vtL~~~~~El~tv~Pv~~~~~~~v~FAPIGL~nMfNsGGAV~~~~~~~~--~~~v~i 707 (747)
T PF05691_consen 630 DFAVYSHRSGELVLLPPKSESLPVTLKPLEFELFTVSPVKVLGGKGVSFAPIGLVNMFNSGGAVQELEYDDD--EASVKI 707 (747)
T ss_pred cEEEEEcCCCeEEEecCCCCCceEEEcCcceEEEEEeeEEEecCCCeeEehhhHHHhhcCCceeEEEEEecC--ccEEEE
Confidence 9999999999999999 599999999999999999999999987 899999999999999999999999753 467999
Q ss_pred EeeecceeEEEecCCCceEeecCeeeeeEEeCCCcEEEEEc
Q 046494 671 KGKGCGRFGAYSSSKPKCCMVDTKEEEFTYNAEDGLLTVKL 711 (724)
Q Consensus 671 ~vkg~G~~g~YsS~~P~~~~vdg~~~~f~y~~~~glltv~l 711 (724)
+|||||+||+|||++|++|.|||++++|+|+++ |+|||+|
T Consensus 708 ~vrG~G~f~aYsS~~P~~c~vdg~ev~F~yd~~-gllt~~v 747 (747)
T PF05691_consen 708 KVRGCGRFGAYSSARPKKCRVDGAEVEFSYDED-GLLTVDV 747 (747)
T ss_pred EEEeccceeEEEecCceEEEECCEEeeEEEcCC-ceEEEeC
Confidence 999999999999999999999999999999997 9999986
No 7
>PLN02229 alpha-galactosidase
Probab=100.00 E-value=2.9e-40 Score=362.13 Aligned_cols=337 Identities=18% Similarity=0.210 Sum_probs=231.0
Q ss_pred ccccccchhhhhhccCHHHHHHHHHHHHHCCCC---CcEEEEecCcCcCccCCCCCCCCccccccccccccccccC-CCC
Q 046494 195 DWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCS---PRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKEN-CKF 270 (724)
Q Consensus 195 ~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~---~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n-~KF 270 (724)
.+|||||||+|+++|||+.|++.++.|.+.|+. ++||+||||||...++.. +++.+| +||
T Consensus 63 PpmGWnSWn~~~~~i~E~~i~~~ad~~v~~Gl~~~Gy~yv~iDDgW~~~~rd~~----------------G~l~~d~~rF 126 (427)
T PLN02229 63 PQMGWNSWNFFACNINETVIKETADALVSTGLADLGYIHVNIDDCWSNLKRDSK----------------GQLVPDPKTF 126 (427)
T ss_pred CCceEEchhhhCcccCHHHHHHHHHHHHHhHHHhCCCEEEEEcCCcCCCCcCCC----------------CCEEEChhhc
Confidence 359999999999999999999999998666665 679999999998766543 347766 789
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccccCCCCCCchhhhhhhhccccccCCccccChhHHHHHHHHHHHH
Q 046494 271 NSSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKKDIAMDSLEKYGVGIIDPQKIFDFYNDLHSY 350 (724)
Q Consensus 271 P~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~d~~~~~~~~~G~g~v~p~da~~fy~~~~~~ 350 (724)
| +|||+++++||+ .||| +|+|....-+.++-.|+|.+ +. .+||+.
T Consensus 127 P--------~G~k~ladyiH~-~GlK-fGIy~d~G~~TC~~~pGS~g----------------~e-~~DA~~-------- 171 (427)
T PLN02229 127 P--------SGIKLLADYVHS-KGLK-LGIYSDAGVFTCQVRPGSLF----------------HE-VDDADI-------- 171 (427)
T ss_pred C--------CcHHHHHHHHHH-CCCc-eEEeccCCCcccCCCCCCcc----------------HH-HHHHHH--------
Confidence 9 899999999999 6999 99998643233333576522 22 245654
Q ss_pred HhhcCCCEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeeccCCCc---ccccccccceEeecCCC
Q 046494 351 LANSGVDGVKVDVQSLMETLGSGYGGRVLLTRQYQQALEQSVAWNFKDNNLICCMSHNSY---SLYSSMKSAVARASEDF 427 (724)
Q Consensus 351 Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cMs~~~~---~~~~~~~~~~~R~SdDf 427 (724)
+|+|||||||+|+|+... . ...+..+++++||.+ .||+|++|+|+|+. ..|..+.+|+||+|+|+
T Consensus 172 fA~WGVDylK~D~C~~~~-----~-~~~~~y~~m~~AL~~------tGRpI~~SlC~WG~~~p~~w~~~~~n~WR~s~DI 239 (427)
T PLN02229 172 FASWGVDYLKYDNCYNLG-----I-KPIERYPPMRDALNA------TGRSIFYSLCEWGVDDPALWAGKVGNSWRTTDDI 239 (427)
T ss_pred HHHcCCCEEEecCCCCCC-----c-chhHHHHHHHHHHHh------hCCCcEEEecCCCCCCHHHHHHhhcCeeeccCCc
Confidence 499999999999997421 1 111223344555544 58999999999763 33666789999999999
Q ss_pred CCCCcchhhHHHHHHHHhhhhccCCCCCCcccccccc-----ccHHHHHHHHHhcCCcEEEecCCC---CCcHHhhh-h-
Q 046494 428 MPGEPTFQTLHIASVAFNSLLLGEIVVPDWDMFQSKH-----ETAEFHATARALGGCAVYVSDKPG---VHDFKILK-R- 497 (724)
Q Consensus 428 ~p~~p~~~~~hi~~~a~nsl~~g~~~~pDwDMf~s~h-----~~a~~HaaaraisggPvyisD~pg---~hd~~lL~-~- 497 (724)
++.|.+..++. -.++.-+.+.++++|||+||+..++ .+.+.|+++|||+++||++|.... ....+||. +
T Consensus 240 ~d~W~sv~~i~-~~~~~~~~~agPG~wnDpDML~vGn~glT~~E~rthfsLWai~~SPLiiG~DL~~m~~~tl~ILtNkE 318 (427)
T PLN02229 240 NDTWASMTTIA-DLNNKWAAYAGPGGWNDPDMLEVGNGGMTYEEYRGHFSIWALMKAPLLIGCDVRNMTAETMEILSNKE 318 (427)
T ss_pred ccccccHHHHH-HHHHHHHhhcCCCCCCCCCeeeeCCCCCCHHHHHHHHHHHHHHhCceeecCCcccCCHHHHHHhcCHH
Confidence 99998754432 2333445568999999999999986 578999999999999999996544 45577775 3
Q ss_pred hcC--CC--CceeeeccCCCCCccccccccCCCCcceEEEEee--cCcceEEEEeecCCCCCCCcccccccCCCCCCcee
Q 046494 498 LVL--PD--GSVLRARHAGRPTRDCLFEDPVMDGKSLLKIWNL--NKLSGVIGVFNCQGAGSWPMKEDMHRKPASPLSIS 571 (724)
Q Consensus 498 lv~--pd--G~ilR~~~pg~pt~d~lf~dp~~d~~~lLki~n~--~~~~gvlg~FN~~~~g~w~~~~~~~~~~~~~~~~~ 571 (724)
++. +| |. .|++. +.+. .++ -+-||.. ..++-+|++||... . +.+++
T Consensus 319 VIAINQD~lG~------qg~~v----~~~~-~~~--~~~vW~~~L~~g~~aValfN~~~-~--------------~~~v~ 370 (427)
T PLN02229 319 VIAVNQDPLGV------QGRKI----QANG-KNG--CQQVWAGPLSGDRLVVALWNRCS-E--------------PATIT 370 (427)
T ss_pred HHhhccccccc------CcEEE----EecC-CCC--ceEEEEEECCCCCEEEEEEeCCC-C--------------CEEEE
Confidence 332 56 43 22222 1111 111 2445554 34566899999643 1 11222
Q ss_pred eeecCCchhhhhhhcCCCCCCcEEEEEeccceEEecCCCCceEEEecCCceEEEEEeeeeE
Q 046494 572 GHVCPLDIEFLERVAGENWNGDCAVYAFNSGVLTKLPKKGNLEVSLATLKCEIYTICPIRV 632 (724)
Q Consensus 572 ~~v~~~D~~~~~~~a~~~~~~~~~vy~~~~g~~~~l~~~~~~~v~L~~~~~ei~t~~Pv~~ 632 (724)
+..+|+. + .+ ...|-|+.--+++-.-......+.++|++.+.-+|.+.|+..
T Consensus 371 --v~~~~lG-l---~~---~~~~~VrDLW~~~dlg~~~~~~~~~~v~~Hg~~l~rl~~~~~ 422 (427)
T PLN02229 371 --ASWDVIG-L---ES---SISVSVRDLWKHKDLSENVVGSFGAQVDAHDCHMYIFTPQTV 422 (427)
T ss_pred --EEHHHcC-C---CC---CCceEEEECCCCCccCccccceEEEEECCCeEEEEEEecccc
Confidence 2233332 1 00 123566665555421111256789999999999999999774
No 8
>PLN02692 alpha-galactosidase
Probab=100.00 E-value=3.7e-40 Score=359.87 Aligned_cols=331 Identities=18% Similarity=0.243 Sum_probs=229.9
Q ss_pred ccccccchhhhhhccCHHHHHHHHHHHHHCCCC---CcEEEEecCcCcCccCCCCCCCCcccccccccccccccc-CCCC
Q 046494 195 DWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCS---PRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKE-NCKF 270 (724)
Q Consensus 195 ~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~---~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~-n~KF 270 (724)
.+|||||||+|+++|+|+.|++.++.+.+.|+. ++||+||||||...++..+ +|.+ ++||
T Consensus 56 PpmGWnSW~~~~~~i~E~~i~~~ad~~~~~gl~~~Gy~yv~iDDgW~~~~rd~~G----------------~~~~d~~kF 119 (412)
T PLN02692 56 PPMGWNSWNHFSCKIDEKMIKETADALVSTGLSKLGYTYVNIDDCWAEIARDEKG----------------NLVPKKSTF 119 (412)
T ss_pred CcceEEchhhhCcccCHHHHHHHHHHHHhccchhcCcEEEEEcCCcCCCCCCCCC----------------CeeeChhhc
Confidence 359999999999999999999999999888776 6899999999988776442 2565 4899
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccc--cCCCCCCchhhhhhhhccccccCCccccChhHHHHHHHHHH
Q 046494 271 NSSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGY--WGGVLPSSDIMKKDIAMDSLEKYGVGIIDPQKIFDFYNDLH 348 (724)
Q Consensus 271 P~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GY--WgGi~P~s~~~~~d~~~~~~~~~G~g~v~p~da~~fy~~~~ 348 (724)
| +|||+++++||+ .||| +|+|... |. |++-.|+| +.||+...
T Consensus 120 P--------~G~k~ladyiH~-~GLK-fGIy~d~-G~~tC~~~~pGS-------------------------~g~e~~DA 163 (412)
T PLN02692 120 P--------SGIKALADYVHS-KGLK-LGIYSDA-GYFTCSKTMPGS-------------------------LGHEEQDA 163 (412)
T ss_pred C--------CcHHHHHHHHHH-CCCc-eEEEecC-CccccCCCCCCc-------------------------hHHHHHHH
Confidence 9 899999999999 6999 9999863 32 22334543 34445455
Q ss_pred HHHhhcCCCEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeeccCCCc---ccccccccceEeecC
Q 046494 349 SYLANSGVDGVKVDVQSLMETLGSGYGGRVLLTRQYQQALEQSVAWNFKDNNLICCMSHNSY---SLYSSMKSAVARASE 425 (724)
Q Consensus 349 ~~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cMs~~~~---~~~~~~~~~~~R~Sd 425 (724)
+++|+|||||||+|+|+.- +.. ...-+.+|.+++++ .||+|++|+|+++. ..|..+.+|+||+|+
T Consensus 164 ~~fA~WGvDylK~D~C~~~-----~~~-----~~~~y~~m~~AL~~--tGRpI~~SlC~wg~~~p~~w~~~~~n~WR~s~ 231 (412)
T PLN02692 164 KTFASWGIDYLKYDNCNND-----GSK-----PTVRYPVMTRALMK--AGRPIFFSLCEWGDMHPALWGSKVGNSWRTTN 231 (412)
T ss_pred HHHHhcCCCEEeccccCCC-----Ccc-----hhHHHHHHHHHHHH--hCCCeEEEecCCCcCChhhhhhhcCCcccccc
Confidence 5679999999999999731 111 11223444444444 58999999999864 236678899999999
Q ss_pred CCCCCCcchhhHHHHHHHHhhhhccCCCCCCcccccccc-----ccHHHHHHHHHhcCCcEEEecCC---CCCcHHhhh-
Q 046494 426 DFMPGEPTFQTLHIASVAFNSLLLGEIVVPDWDMFQSKH-----ETAEFHATARALGGCAVYVSDKP---GVHDFKILK- 496 (724)
Q Consensus 426 Df~p~~p~~~~~hi~~~a~nsl~~g~~~~pDwDMf~s~h-----~~a~~HaaaraisggPvyisD~p---g~hd~~lL~- 496 (724)
|+++.|...... +-.+...+.++++++|||+||+..++ .+.+.|+++|||+++||+||... .+...+||.
T Consensus 232 DI~d~W~sv~~~-~~~~~~~~~~agPG~wnDpDML~VGn~glT~~E~rThfsLWai~~SPLiiG~DL~~~~~~~l~iLtN 310 (412)
T PLN02692 232 DISDTWDSMISR-ADMNEVYAELARPGGWNDPDMLEVGNGGMTKDEYIVHFSIWAISKAPLLLGCDVRNMTKETMDIVAN 310 (412)
T ss_pred ccccchHhHHHH-HHHHHHHhhccCCCCCCCCCeEeECCCCCCHHHHHHHHHHHHHHhCcceecCCcccCCHHHHHHhcC
Confidence 999999865443 23344555678999999999999987 47899999999999999999654 455577775
Q ss_pred h-hcC--CC--CceeeeccCCCCCccccccccCCCCcceEEEEee--cCcceEEEEeecCCCCCCCcccccccCCCCCCc
Q 046494 497 R-LVL--PD--GSVLRARHAGRPTRDCLFEDPVMDGKSLLKIWNL--NKLSGVIGVFNCQGAGSWPMKEDMHRKPASPLS 569 (724)
Q Consensus 497 ~-lv~--pd--G~ilR~~~pg~pt~d~lf~dp~~d~~~lLki~n~--~~~~gvlg~FN~~~~g~w~~~~~~~~~~~~~~~ 569 (724)
+ ++. +| |. +|++. + .++. +-||.. ..+.-+|++||.....
T Consensus 311 ~evIAiNQD~lG~------q~~~v----~----~~~~--~~vW~k~l~~g~~aVal~N~~~~~----------------- 357 (412)
T PLN02692 311 KEVIAVNQDPLGV------QAKKV----R----MEGD--LEIWAGPLSGYRVALLLLNRGPWR----------------- 357 (412)
T ss_pred HHHhhhccCcccc------CcEEE----E----ecCC--eEEEEEECCCCCEEEEEEECCCCC-----------------
Confidence 2 333 56 42 11111 0 1222 344443 4456699999954311
Q ss_pred eeeeecCCchhhhhhhcCCCCCCcEEEEEeccceEEecCCCCceEEEecCCceEEEEEeee
Q 046494 570 ISGHVCPLDIEFLERVAGENWNGDCAVYAFNSGVLTKLPKKGNLEVSLATLKCEIYTICPI 630 (724)
Q Consensus 570 ~~~~v~~~D~~~~~~~a~~~~~~~~~vy~~~~g~~~~l~~~~~~~v~L~~~~~ei~t~~Pv 630 (724)
.+-.+..+|+. + .+ ...|-|+.--+++-.-......++++|++.+.-+|.+.|+
T Consensus 358 ~~i~~~~~~lg-l---~~---~~~~~vrDLW~~~~~g~~~~~~~~~~v~~Hg~~l~rl~~~ 411 (412)
T PLN02692 358 NSITANWDDIG-I---PA---NSIVEARDLWEHKTLKQHFVGNLTATVDSHACKMYILKPI 411 (412)
T ss_pred EEEEEeHHHhC-C---CC---CCceEEEECCCCCccCccccceEEEEECCceEEEEEEecC
Confidence 11122223332 1 10 1245566655554322123577899999999999999885
No 9
>PLN02808 alpha-galactosidase
Probab=100.00 E-value=6.3e-40 Score=357.19 Aligned_cols=330 Identities=17% Similarity=0.239 Sum_probs=228.1
Q ss_pred cccccchhhhhhccCHHHHHHHHHHHHHCCCC---CcEEEEecCcCcCccCCCCCCCCccccccccccccccccC-CCCC
Q 046494 196 WFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCS---PRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKEN-CKFN 271 (724)
Q Consensus 196 ~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~---~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n-~KFP 271 (724)
+|||||||+|+++|||+.|++.++.|++.|+. ++||+||||||...++..+ ++.+| .|||
T Consensus 33 pmGWnsW~~~~~~i~e~~i~~~a~~mv~~Gl~~~Gy~yv~iDd~W~~~~rd~~G----------------~~~~d~~rFP 96 (386)
T PLN02808 33 QMGWNSWNHFQCNINETLIKQTADAMVSSGLAALGYKYINLDDCWAELKRDSQG----------------NLVPKASTFP 96 (386)
T ss_pred cceEEchHHHCCCCCHHHHHHHHHHHHHcchHHhCCEEEEEcCCcCCCCcCCCC----------------CEeeChhhcC
Confidence 59999999999999999999999998888877 7899999999987766442 36666 7999
Q ss_pred CCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccc--cCCCCCCchhhhhhhhccccccCCccccChhHHHHHHHHHHH
Q 046494 272 SSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGY--WGGVLPSSDIMKKDIAMDSLEKYGVGIIDPQKIFDFYNDLHS 349 (724)
Q Consensus 272 ~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GY--WgGi~P~s~~~~~d~~~~~~~~~G~g~v~p~da~~fy~~~~~ 349 (724)
+|||+++++||+ .||| +|+|... |+ |++-.|+| +.||+.-.+
T Consensus 97 --------~G~~~lad~iH~-~Glk-fGiy~~~-G~~tC~~~~pGs-------------------------~~~e~~DA~ 140 (386)
T PLN02808 97 --------SGIKALADYVHS-KGLK-LGIYSDA-GTLTCSKTMPGS-------------------------LGHEEQDAK 140 (386)
T ss_pred --------ccHHHHHHHHHH-CCCc-eEEEecC-CccccCCCCCcc-------------------------hHHHHHHHH
Confidence 899999999999 7999 9999863 32 22334554 234444445
Q ss_pred HHhhcCCCEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeeccCCCc-c--cccccccceEeecCC
Q 046494 350 YLANSGVDGVKVDVQSLMETLGSGYGGRVLLTRQYQQALEQSVAWNFKDNNLICCMSHNSY-S--LYSSMKSAVARASED 426 (724)
Q Consensus 350 ~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cMs~~~~-~--~~~~~~~~~~R~SdD 426 (724)
++++|||||||+|+|+.- +. . .+.-+.+|.+++++ .||+|++++|.++. . -|..+.+|+||+|+|
T Consensus 141 ~fA~WGvDylK~D~C~~~-----~~-~----~~~~y~~m~~AL~~--tGRpi~~slc~wg~~~p~~w~~~~~n~WR~s~D 208 (386)
T PLN02808 141 TFASWGIDYLKYDNCENT-----GT-S----PQERYPKMSKALLN--SGRPIFFSLCEWGQEDPATWAGDIGNSWRTTGD 208 (386)
T ss_pred HHHHhCCCEEeecCcCCC-----Cc-c----HHHHHHHHHHHHHH--hCCCeEEEecCCCCCCHHHHHHhhcCcccccCC
Confidence 669999999999999731 11 1 12223444444444 48999999999752 2 255678999999999
Q ss_pred CCCCCcchhhHHHHHHHHhhhhccCCCCCCcccccccc-----ccHHHHHHHHHhcCCcEEEecCCC---CCcHHhhh-h
Q 046494 427 FMPGEPTFQTLHIASVAFNSLLLGEIVVPDWDMFQSKH-----ETAEFHATARALGGCAVYVSDKPG---VHDFKILK-R 497 (724)
Q Consensus 427 f~p~~p~~~~~hi~~~a~nsl~~g~~~~pDwDMf~s~h-----~~a~~HaaaraisggPvyisD~pg---~hd~~lL~-~ 497 (724)
+++.|....+. +-.++.-+.+++++.|||+||++.++ .+.+.|+++|||+++||+||+.+- +...+||+ +
T Consensus 209 i~d~W~~v~~~-~~~~~~~~~~agPG~wnDpDML~vGn~glt~~E~rthfsLWam~~SPLiiG~DL~~~~~~~l~iLtNk 287 (386)
T PLN02808 209 IQDNWDSMTSR-ADQNDRWASYARPGGWNDPDMLEVGNGGMTTEEYRSHFSIWALAKAPLLIGCDIRSMDNETFELLSNK 287 (386)
T ss_pred cccchhhHHHH-HHhhhhhHhhcCCCCCCCCCeeeECCCCCCHHHHHHHHHHHHHHhCcceecCCcCcCCHHHHHHhcCH
Confidence 99999865443 23344445568899999999999986 578999999999999999997544 55577776 3
Q ss_pred -hcC--CC--CceeeeccCCCCCccccccccCCCCcceEEEEeecCcceEEEEeecCCCCCCCcccccccCCCCCCceee
Q 046494 498 -LVL--PD--GSVLRARHAGRPTRDCLFEDPVMDGKSLLKIWNLNKLSGVIGVFNCQGAGSWPMKEDMHRKPASPLSISG 572 (724)
Q Consensus 498 -lv~--pd--G~ilR~~~pg~pt~d~lf~dp~~d~~~lLki~n~~~~~gvlg~FN~~~~g~w~~~~~~~~~~~~~~~~~~ 572 (724)
++. +| |. +|++. + .++..-.-+..+.++.-+|++||.... +.+++
T Consensus 288 evIAINQD~lG~------~~~~v----~----~~~~~~vW~k~L~~g~~aVal~N~~~~---------------~~~~~- 337 (386)
T PLN02808 288 EVIAVNQDKLGV------QGKKV----K----KDGDLEVWAGPLSKKRVAVVLWNRGSS---------------RATIT- 337 (386)
T ss_pred HHHhhcCCcccc------CcEEE----E----ecCCeEEEEEECCCCCEEEEEEECCCC---------------CEEEE-
Confidence 433 56 43 22222 1 122222233334556779999996531 11222
Q ss_pred eecCCchhhhhhhcCCCCCCcEEEEEeccceEEecCCCCceEEEecCCceEEEEEee
Q 046494 573 HVCPLDIEFLERVAGENWNGDCAVYAFNSGVLTKLPKKGNLEVSLATLKCEIYTICP 629 (724)
Q Consensus 573 ~v~~~D~~~~~~~a~~~~~~~~~vy~~~~g~~~~l~~~~~~~v~L~~~~~ei~t~~P 629 (724)
+..+|+. + .+ .+.|-|+.--+++-.-. ....++++|++.+.-+|.+.|
T Consensus 338 -~~~~~lg-l---~~---~~~~~vrDlWs~~~~g~-~~~~~~~~v~pHg~~~~rlt~ 385 (386)
T PLN02808 338 -ARWSDIG-L---NS---SAVVNARDLWAHSTQSS-VKGQLSALVESHACKMYVLTP 385 (386)
T ss_pred -EEHHHhC-C---CC---CCceEEEECCCCCccCc-ccceEEEEECCceEEEEEEeC
Confidence 2233332 1 00 13466666656542211 135688999999999998876
No 10
>PLN03231 putative alpha-galactosidase; Provisional
Probab=100.00 E-value=2.1e-36 Score=326.39 Aligned_cols=282 Identities=16% Similarity=0.128 Sum_probs=185.8
Q ss_pred cccccchhhhhhccCHHHHHHHHHHHHHCCCC---CcEEEEecCcCcCccCCCCCCCCccccccccccccccccC-CCCC
Q 046494 196 WFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCS---PRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKEN-CKFN 271 (724)
Q Consensus 196 ~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~---~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n-~KFP 271 (724)
+|||+|||+|+++|||+.|+++++ +.+.|+. ++||+|||||+...+.+.........+.......+.+.++ +|||
T Consensus 2 pMGWNSWn~f~~~i~E~~i~~~Ad-~v~~gL~~~GY~Yv~iDd~W~~~~~~g~~~~~~~~~~~~~~d~~G~l~pd~~rFP 80 (357)
T PLN03231 2 PRGWNSYDSFSFTISEEQFLENAK-IVSETLKPHGYEYVVIDYLWYRKLKHGWFKTSAKSPGYDLIDKWGRPLPDPKRWP 80 (357)
T ss_pred CCCccchhccCcCcCHHHHHHHHH-HHHcchHHhCCEEEEECCcccccccccccccccccccccccCCCCCcccCcccCC
Confidence 599999999999999999999999 6677776 5799999999976421100000000000000112346666 8999
Q ss_pred CCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccc-cCC--------CCCCchhhh---hhhhccccc---cCC--ccc
Q 046494 272 SSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGY-WGG--------VLPSSDIMK---KDIAMDSLE---KYG--VGI 334 (724)
Q Consensus 272 ~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GY-WgG--------i~P~s~~~~---~d~~~~~~~---~~G--~g~ 334 (724)
+.. ..+|||+++++||+ .||| +|++... |. .+. =+|+|.+.+ +|++..... ... +++
T Consensus 81 s~~---~~~G~k~lADyvHs-~GLK-fGIY~~~-G~~tca~~~~~pi~G~~Gs~g~~~~a~Dia~~~~~c~~~~~~~~~v 154 (357)
T PLN03231 81 STT---GGKGFAPIAAKVHA-LGLK-LGIHVMR-GISTTAVKKKTPILGAFKSNGHAWNAKDIALMDQACPWMQQCFVGV 154 (357)
T ss_pred CCc---cccCcHHHHHHHHh-CCcc-eEEEecC-CccchhcccCCccCCCCcccccccchhhhccccccccccccccccc
Confidence 432 23599999999999 6999 8998653 32 111 024443322 244332111 011 122
Q ss_pred -cChhHHHHHHHHHHHHHhhcCCCEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeeccCCCccc-
Q 046494 335 -IDPQKIFDFYNDLHSYLANSGVDGVKVDVQSLMETLGSGYGGRVLLTRQYQQALEQSVAWNFKDNNLICCMSHNSYSL- 412 (724)
Q Consensus 335 -v~p~da~~fy~~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cMs~~~~~~- 412 (724)
.+...+++||+...+.+|+|||||||+|+|..-. ....+..+++.+||.+ +||+|++|+|.+....
T Consensus 155 ~~~~~gaq~y~~~~a~~fA~WGVDylK~D~c~~~~------~~~~~~y~~m~~AL~~------tGRpIv~Slc~g~~~~~ 222 (357)
T PLN03231 155 NTSSEGGKLFIQSLYDQYASWGIDFIKHDCVFGAE------NPQLDEILTVSKAIRN------SGRPMIYSLSPGDGATP 222 (357)
T ss_pred cccchhHHHHHHHHHHHHHHhCCCEEeecccCCCC------cccHHHHHHHHHHHHH------hCCCeEEEecCCCCCCc
Confidence 2456799999999999999999999999876311 1112223445555555 5899999999854322
Q ss_pred -cc---ccccceEeecCCCCCCCcchhhHHHHHHHHhh-------hhccCCCCCCcccccccc-----------------
Q 046494 413 -YS---SMKSAVARASEDFMPGEPTFQTLHIASVAFNS-------LLLGEIVVPDWDMFQSKH----------------- 464 (724)
Q Consensus 413 -~~---~~~~~~~R~SdDf~p~~p~~~~~hi~~~a~ns-------l~~g~~~~pDwDMf~s~h----------------- 464 (724)
|. .+.+|+||+|+|+++.|.....+.-....+.. -+.|+++|||+||+..++
T Consensus 223 ~~~~~i~~~an~WR~s~DI~d~W~~v~~~~~~~~~~~~~~~~~~~~~agpG~WnD~DML~vG~~g~~~~~~g~~~~~glT 302 (357)
T PLN03231 223 GLAARVAQLVNMYRVTGDDWDDWKYLVKHFDVARDFAAAGLIAIPSVVGGKSWVDLDMLPFGRLTDPAAAYGPYRNSRLS 302 (357)
T ss_pred hhhhhhhhhcCcccccCCcccchhhHHHHHHHHHHHhhhcccccccCCCCCCCCCccchhcCCCCCCcccccccccCCCC
Confidence 22 34589999999999999875443222111221 145678999999999883
Q ss_pred -ccHHHHHHHHHhcCCcEEEecCCCCC---cHHhhh
Q 046494 465 -ETAEFHATARALGGCAVYVSDKPGVH---DFKILK 496 (724)
Q Consensus 465 -~~a~~HaaaraisggPvyisD~pg~h---d~~lL~ 496 (724)
.+.+.|+++|||+.+||++|..+.+- .++||.
T Consensus 303 ~~E~rthfslWam~~SPLiiG~DL~~~~~~tl~iLt 338 (357)
T PLN03231 303 LEEKKTQMTLWAVAKSPLMFGGDLRRLDNETLSLLT 338 (357)
T ss_pred HHHHHHHHHHHHHHhCchhhcCCcccCCHHHHHHhc
Confidence 37899999999999999999665544 466664
No 11
>PLN02899 alpha-galactosidase
Probab=100.00 E-value=6.4e-35 Score=327.19 Aligned_cols=281 Identities=18% Similarity=0.155 Sum_probs=187.0
Q ss_pred ccccccccchhhhhhccCHHHHHHHHHHHHHCCCC---CcEEEEecCcCcCccCCCCCCCCccccccccccccccccC-C
Q 046494 193 HLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCS---PRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKEN-C 268 (724)
Q Consensus 193 ~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~---~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n-~ 268 (724)
...+|||+|||.|+++|||+.|+++++. .+.|+. ++||+|||||+...+++..... .+.......+.+.+| +
T Consensus 29 ~TPPMGWNSWn~f~~~I~E~~i~~~Ad~-vs~GLk~~GY~YVnIDDcW~~~~~~g~~~~s---~g~~~~D~~GrLvPDp~ 104 (633)
T PLN02899 29 SFPPRGWNSYDSFSWIVSEEEFLQNAEI-VSQRLLPFGYEYVVVDYLWYRKKVEGAYVDS---LGFDVIDEWGRPIPDPG 104 (633)
T ss_pred CCCCCCCcchhhhccCCCHHHHHHHHHH-HHcchHhhCCeEEEEcccccccccccccccc---ccccccCCCCCCccCcc
Confidence 3446999999999999999999999994 456666 5799999999975433110000 000000112346666 8
Q ss_pred CCCCCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccc---------------cCCCCCCc-hh-hhhhhhccccccCC
Q 046494 269 KFNSSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGY---------------WGGVLPSS-DI-MKKDIAMDSLEKYG 331 (724)
Q Consensus 269 KFP~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GY---------------WgGi~P~s-~~-~~~d~~~~~~~~~G 331 (724)
|||+. +.++|||+++++||+ +||| +|++.. .|. +||..+++ .+ .++|++....+..+
T Consensus 105 RFPSs---~~g~GmK~LADYVHs-kGLK-FGIY~~-~Gi~tcA~~~~~PI~gs~~g~~y~~s~~~~~a~DIa~~~~tC~w 178 (633)
T PLN02899 105 RWPSS---RGGKGFTEVAEKVHA-MGLK-FGIHVM-RGISTQAVNANTPILDAVKGGAYEESGRQWRAKDIALKERACAW 178 (633)
T ss_pred cCCCC---ccCCCcHHHHHHHHh-CCcc-eEEEec-CCCcccccccCCccccccccccccccccccchhhcccccccccc
Confidence 99953 233699999999999 7999 899754 342 34444443 11 12355544433222
Q ss_pred --ccc--c--ChhHHHHHHHHHHHHHhhcCCCEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeec
Q 046494 332 --VGI--I--DPQKIFDFYNDLHSYLANSGVDGVKVDVQSLMETLGSGYGGRVLLTRQYQQALEQSVAWNFKDNNLICCM 405 (724)
Q Consensus 332 --~g~--v--~p~da~~fy~~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cM 405 (724)
.++ + ++..+++||+.+++.+|+|||||||+|+|+. + . ...+..+++.+||.+ .||+|++++
T Consensus 179 ~~~g~~~vDa~~~~g~a~~~Sla~tfAsWGVDyLKyD~c~~-~----~--~~~~ey~~ms~AL~a------TGRPIvySL 245 (633)
T PLN02899 179 MSHGFMSVNTKLGAGKAFLRSLYDQYAEWGVDFVKHDCVFG-D----D--FDLEEITYVSEVLKE------LDRPIVYSL 245 (633)
T ss_pred CCCCcccccccccchhhhhHHHHHHHHHhCCCEEEEcCCCC-C----C--CChHHHHHHHHHHHH------hCCCeEEEe
Confidence 222 2 2356799999999999999999999998763 1 1 122334556666665 489999999
Q ss_pred cCCCccc--cc---ccccceEeecCCCCCCCcchhhHHHHHHHHhh--hh--cc--CCCCCCcccccccc----------
Q 046494 406 SHNSYSL--YS---SMKSAVARASEDFMPGEPTFQTLHIASVAFNS--LL--LG--EIVVPDWDMFQSKH---------- 464 (724)
Q Consensus 406 s~~~~~~--~~---~~~~~~~R~SdDf~p~~p~~~~~hi~~~a~ns--l~--~g--~~~~pDwDMf~s~h---------- 464 (724)
|.+.... |. .+.+|+||+++|+++.|............+.. .. .+ .+.|||+||+..+.
T Consensus 246 spG~~~~p~wa~~v~~~aNmWRitgDI~D~W~sV~~~~d~~~~~~~~~~~g~~G~~gg~WNDpDML~VG~lg~~~~n~G~ 325 (633)
T PLN02899 246 SPGTSATPTMAKEVSGLVNMYRITGDDWDTWGDVAAHFDVSRDFAAAGLIGAKGLRGRSWPDLDMLPLGWLTDPGSNVGP 325 (633)
T ss_pred cCCcccchhhhhhhhccCccceecCCcccchHHHHHHHHHHHHHhhccccccCCCCCCCCCCcceecccCCCccccccCc
Confidence 9754432 22 35689999999999999865432211111211 11 11 24899999999871
Q ss_pred --------ccHHHHHHHHHhcCCcEEEecCCC---CCcHHhhh
Q 046494 465 --------ETAEFHATARALGGCAVYVSDKPG---VHDFKILK 496 (724)
Q Consensus 465 --------~~a~~HaaaraisggPvyisD~pg---~hd~~lL~ 496 (724)
.+.+.|+++|||..+||++|..+- ...++||.
T Consensus 326 ~r~~~LT~dE~rThfSLWAm~aSPLiiG~DLr~md~~tl~ILT 368 (633)
T PLN02899 326 HRACNLTLDEQKTQMTLWAMAKSPLMYGGDLRKLDQATYSLIT 368 (633)
T ss_pred cccCCCCHHHHHHHHHHHHHHhCchhhcCCcccCCHHHHHHhc
Confidence 378999999999999999996544 44577775
No 12
>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.8e-29 Score=267.21 Aligned_cols=337 Identities=18% Similarity=0.216 Sum_probs=225.4
Q ss_pred cccccchhhhhhccC----------HHHHHHHHHHHHHCCCC---CcEEEEecCcCcCccCCCCCCCCcccccccccccc
Q 046494 196 WFGWCTWDAFYKQVN----------PQGIKEGLHSFLEGGCS---PRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLV 262 (724)
Q Consensus 196 ~~GWcTW~af~~~vt----------e~~I~~~l~~l~~~Gi~---~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~ 262 (724)
+|||.+|+.|.|+++ |..+++.++.|++.|.. ++||+|||||....++.++ |
T Consensus 34 ~MGw~sW~~f~cniDCv~~pd~cIsE~l~~~~ad~mvseG~~~vGY~yi~iDDCW~e~~Rd~~g-------------r-- 98 (414)
T KOG2366|consen 34 QMGWNSWERFRCNIDCVFGPDFCISEQLFKEMADAMVSEGLADVGYEYINIDDCWSEVTRDSDG-------------R-- 98 (414)
T ss_pred CcccccccceeeecccccCCccchhHHHHHHHHHHHHHhHHHhcCcEEEechhhhhhhccCCcc-------------c--
Confidence 599999999999888 99999999999998876 6899999999999888653 2
Q ss_pred ccccC-CCCCCCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccccCCCCCCchhhhhhhhccccccCCccccChhHHH
Q 046494 263 DIKEN-CKFNSSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKKDIAMDSLEKYGVGIIDPQKIF 341 (724)
Q Consensus 263 ~~~~n-~KFP~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~d~~~~~~~~~G~g~v~p~da~ 341 (724)
+.++ ++|| +|++++.+++|. .||| +|++-...-|-+.-.|+|-+ ++ ..||+
T Consensus 99 -Lva~~~rFP--------~Gi~~ladyvHs-~GLK-lGiYsD~G~~TC~g~PGS~~----------------~e-~~DA~ 150 (414)
T KOG2366|consen 99 -LVADPSRFP--------SGIKALADYVHS-KGLK-LGIYSDAGNFTCAGYPGSLG----------------HE-ESDAK 150 (414)
T ss_pred -cccChhhcc--------cchhhhhhchhh-cCCc-eeeeeccCchhhccCCcccc----------------hh-hhhhh
Confidence 4444 7899 899999999999 6999 78876643333333476522 22 25777
Q ss_pred HHHHHHHHHHhhcCCCEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeeccCCCccc---c-----
Q 046494 342 DFYNDLHSYLANSGVDGVKVDVQSLMETLGSGYGGRVLLTRQYQQALEQSVAWNFKDNNLICCMSHNSYSL---Y----- 413 (724)
Q Consensus 342 ~fy~~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cMs~~~~~~---~----- 413 (724)
.| ++|||||+|+|+|+..-. ..++.. .-|+.++++ +||+|+++.|.|+... +
T Consensus 151 tF--------A~WgvDylKlD~C~~~~~------~~~~~Y----p~ms~aLN~--tGrpi~ySlC~W~~~~~~~~~~pny 210 (414)
T KOG2366|consen 151 TF--------ADWGVDYLKLDGCFNNLI------TMPEGY----PIMSRALNN--TGRPIFYSLCSWPAYHPGLPHHPNY 210 (414)
T ss_pred hh--------HhhCCcEEeccccccccc------cccccc----hhHHHHHhc--cCCceEEEeccCcccccCccCCCcc
Confidence 76 999999999999985211 111222 333444444 6999999999997532 3
Q ss_pred --cccccceEeecCCCCCCCcchhhHHHHHHHHh---hhhccCCCCCCcccccccc-----ccHHHHHHHHHhcCCcEEE
Q 046494 414 --SSMKSAVARASEDFMPGEPTFQTLHIASVAFN---SLLLGEIVVPDWDMFQSKH-----ETAEFHATARALGGCAVYV 483 (724)
Q Consensus 414 --~~~~~~~~R~SdDf~p~~p~~~~~hi~~~a~n---sl~~g~~~~pDwDMf~s~h-----~~a~~HaaaraisggPvyi 483 (724)
.+++.|.||+.||+...|.+.-.+.-+.+-.+ .-..|++.|+|+||+.+++ +++..|++.||+..+||.+
T Consensus 211 ~~i~~~~N~WR~~dDI~dtW~Sv~~I~d~~~~nqd~~~~~agPg~WNDpDmL~iGN~G~s~e~y~~qf~lWai~kAPLlm 290 (414)
T KOG2366|consen 211 KNISTICNSWRTTDDIQDTWKSVDSIIDYICWNQDRIAPLAGPGGWNDPDMLEIGNGGMSYEEYKGQFALWAILKAPLLM 290 (414)
T ss_pred hhhhhhhccccchhhhhhHHHHHHHHHHHHhhhhhhhccccCCCCCCChhHhhcCCCCccHHHHHHHHHHHHHhhchhhh
Confidence 23678999999999999886555443222222 3357889999999999986 6889999999999999999
Q ss_pred ecC---CCCCcHHhhh-hhcC---CC--CceeeeccCCCCCccccccccCCCCcceEEEEeec--CcceEEEEeecCCCC
Q 046494 484 SDK---PGVHDFKILK-RLVL---PD--GSVLRARHAGRPTRDCLFEDPVMDGKSLLKIWNLN--KLSGVIGVFNCQGAG 552 (724)
Q Consensus 484 sD~---pg~hd~~lL~-~lv~---pd--G~ilR~~~pg~pt~d~lf~dp~~d~~~lLki~n~~--~~~gvlg~FN~~~~g 552 (724)
|.. ......++|. |.+. +| |..=|+- +.++ ..+.||... +..-+++.+|.+..+
T Consensus 291 s~Dlr~is~~~~~il~nk~~IaiNQDplgiqGr~i--------------~~e~-~~ievw~~pls~~~~Ava~lNr~~~~ 355 (414)
T KOG2366|consen 291 SNDLRLISKQTKEILQNKEVIAINQDPLGIQGRKI--------------VLEG-DSIEVWSGPLSGKSVAVAFLNRRKTG 355 (414)
T ss_pred ccchhhcCHHHHHHhcChhheeccCCccchhheee--------------eecC-CceEEEeeccCCceEEEEEecccCCC
Confidence 964 4455666665 4332 33 2111110 0022 226677653 334455666644212
Q ss_pred CCCcccccccCCCCCCceeeeecCCchhhhhhhcCCCCCCcEEEEEeccceEEecCCCCceEEEecCCceEEEEEeeee
Q 046494 553 SWPMKEDMHRKPASPLSISGHVCPLDIEFLERVAGENWNGDCAVYAFNSGVLTKLPKKGNLEVSLATLKCEIYTICPIR 631 (724)
Q Consensus 553 ~w~~~~~~~~~~~~~~~~~~~v~~~D~~~~~~~a~~~~~~~~~vy~~~~g~~~~l~~~~~~~v~L~~~~~ei~t~~Pv~ 631 (724)
.|..+| .++..+.... ....|.+..--++.+..++..+++.+.++|.+.-+|.+.|..
T Consensus 356 -------------~~~~It-~~~l~~~g~~-------~~~~~~~~dLw~~~~~~~~~~~~i~~~V~phG~~l~~l~~~~ 413 (414)
T KOG2366|consen 356 -------------IPARIT-AASLRELGLT-------NPASYTAHDLWSGVLGFLPTKDSISAQVNPHGVVLFVLHPSN 413 (414)
T ss_pred -------------CCcccc-HHHHhhcCCC-------CCceeEeeehhhccccccccCCeEEEEECCCCcEEEEEEecc
Confidence 022233 0111111100 022344444445555566778999999999999999887764
No 13
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycosyl hydrolase family 27, family 31 and family 36 alpha-galactosidases form the glycosyl hydrolase clan GH-D (acc_GH from CAZY), a superfamily of alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases which are likely to share a common catalytic mechanism and structural topology. Alpha-galactosidase (3.2.1.22 from EC) (melibiase) [] catalyzes the hydrolysis of melibiose into galactose and glucose. In man, the deficiency of this enzyme is the cause of Fabry's disease (X-linked sphingolipidosis). Alpha-galactosidase is present in a variety of organisms. There is a considerable degree of similarity in the sequence of alpha-galactosidase from various eukaryotic species. Escherichia coli alpha-galactosidase (gene melA), which requires NAD and magnesium as cofactors, is not structurally related to the eukaryotic enzymes; by contrast, an Escherichia coli plasmid encoded alpha-galactosidase (gene rafA P16551 from SWISSPROT) [] contains a region of about 50 amino acids which is similar to a domain of the eukaryotic alpha-galactosidases. Alpha-N-acetylgalactosaminidase (3.2.1.49 from EC) [] catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D- galactosaminides. In man, the deficiency of this enzyme is the cause of Schindler and Kanzaki diseases. The sequence of this enzyme is highly related to that of the eukaryotic alpha-galactosidases.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1KTC_A 1KTB_A 1UAS_A 3H55_A 3H53_A 3IGU_B 3H54_A 3LRM_A 3LRL_A 3LRK_A ....
Probab=99.93 E-value=3.3e-25 Score=244.31 Aligned_cols=237 Identities=21% Similarity=0.322 Sum_probs=157.3
Q ss_pred ceEEEEEecCChhHHHHHHH-HHHHHhcCcCCCccccccCcccccccccchhhhhhccCHHHHHHHHHHHHHCCCCCcEE
Q 046494 153 FEAVFINSGDNPFELIKDSI-KILEKHKGTFSHLENKKIPRHLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPRFL 231 (724)
Q Consensus 153 ~~~v~v~~g~dp~~~i~~A~-~~~~~~~~tf~~~~~k~~P~~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~~v 231 (724)
++.+++..+.+.++.|.+.+ +.+++++..-+ ...+++ ++|||||+++++++||+.|++.++.+++.|++ ++
T Consensus 4 tP~~~~~~s~~gl~~~s~~~h~~~r~~~~~~~-~~~~~~-----pv~~nsW~~~~~d~~e~~i~~~a~~~~~~G~e--~f 75 (394)
T PF02065_consen 4 TPEAVASYSDQGLNGMSQRFHRFVRRHLLRPP-WRDKPP-----PVGWNSWEAYYFDITEEKILELADAAAELGYE--YF 75 (394)
T ss_dssp ---EEEEEESBHHHHHHHHHHHHHHHHTSTTT-TTTSS-------EEEESHHHHTTG--HHHHHHHHHHHHHHT-S--EE
T ss_pred CCeEEEEEecCCHHHHHHHHHHHHHHhcCCCc-cCCCCC-----ceEEEcccccCcCCCHHHHHHHHHHHHHhCCE--EE
Confidence 45577788888899999988 66787764321 123333 37999999999999999999999999999987 99
Q ss_pred EEecCcCcCccCCCCCCCCccccccccccccccccC-CCCCCCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccccCC
Q 046494 232 VIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKEN-CKFNSSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGYWGG 310 (724)
Q Consensus 232 iIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n-~KFP~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgG 310 (724)
+||||||..+++.. ..+++|.++ +||| +||++++++||+ .||| +|+|.++. .
T Consensus 76 viDDGW~~~r~~d~-------------~~~GdW~~~~~kFP--------~Gl~~l~~~i~~-~Gmk-~GlW~ePe----~ 128 (394)
T PF02065_consen 76 VIDDGWFGGRDDDN-------------AGLGDWEPDPKKFP--------NGLKPLADYIHS-LGMK-FGLWFEPE----M 128 (394)
T ss_dssp EE-SSSBCTESTTT-------------STTSBECBBTTTST--------THHHHHHHHHHH-TT-E-EEEEEETT----E
T ss_pred EEcCccccccCCCc-------------ccCCceeEChhhhC--------CcHHHHHHHHHH-CCCe-EEEEeccc----c
Confidence 99999998755422 357788866 8999 899999999999 7999 99999983 5
Q ss_pred CCCCchhhhh--hhhccccc---cCC-----ccccChhHHHHH-HHHHHHHHhhcCCCEEEEccccchhhccCCCCC--h
Q 046494 311 VLPSSDIMKK--DIAMDSLE---KYG-----VGIIDPQKIFDF-YNDLHSYLANSGVDGVKVDVQSLMETLGSGYGG--R 377 (724)
Q Consensus 311 i~P~s~~~~~--d~~~~~~~---~~G-----~g~v~p~da~~f-y~~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g--~ 377 (724)
+.|+|+.+++ ||.+..-. ..| +.+-+| ++++| ++.+.+.|++|||||+|+|++..+...+....+ .
T Consensus 129 v~~~S~l~~~hPdw~l~~~~~~~~~~r~~~vLD~~~p-ev~~~l~~~i~~ll~~~gidYiK~D~n~~~~~~~~~~~~~~~ 207 (394)
T PF02065_consen 129 VSPDSDLYREHPDWVLRDPGRPPTLGRNQYVLDLSNP-EVRDYLFEVIDRLLREWGIDYIKWDFNRDITEAGSPSLPEGY 207 (394)
T ss_dssp EESSSCHCCSSBGGBTCCTTSE-ECBTTBEEB-TTSH-HHHHHHHHHHHHHHHHTT-SEEEEE-TS-TTS-SSTTS-GHH
T ss_pred ccchhHHHHhCccceeecCCCCCcCcccceEEcCCCH-HHHHHHHHHHHHHHHhcCCCEEEeccccCCCCCCCCCchHHH
Confidence 7788877665 77764211 111 122244 46666 556778899999999999999865433222111 1
Q ss_pred hhHHHHHHHHHHHHHHhhCCCCceEeeccCCCcccccc-cccceEeecCC
Q 046494 378 VLLTRQYQQALEQSVAWNFKDNNLICCMSHNSYSLYSS-MKSAVARASED 426 (724)
Q Consensus 378 ~~l~~ay~~Al~~s~~~~f~~~~iI~cMs~~~~~~~~~-~~~~~~R~SdD 426 (724)
.+...++++-+++ +++.||+.-|.+|-|.....=+.. .+....-+||+
T Consensus 208 ~~~~~~~y~l~~~-L~~~~P~v~iE~CssGG~R~D~g~l~~~~~~w~SD~ 256 (394)
T PF02065_consen 208 HRYVLGLYRLLDR-LRARFPDVLIENCSSGGGRFDPGMLYYTPQSWTSDN 256 (394)
T ss_dssp HHHHHHHHHHHHH-HHHHTTTSEEEE-BTTBTTTSHHHHCCSSEEESBST
T ss_pred HHHHHHHHHHHHH-HHHhCCCcEEEeccCCCCccccchheeccccccCCc
Confidence 2334455655555 788899888888988765432221 33444455663
No 14
>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism]
Probab=99.89 E-value=2.1e-22 Score=221.18 Aligned_cols=339 Identities=21% Similarity=0.261 Sum_probs=216.4
Q ss_pred cEEEEEEEeecCceEEEEecCCCCcEE----EEEEcCCcc---ccccccceEEEEEecCChhHHHHHHH-HHHHHhcCcC
Q 046494 111 TFYILLLPVLDGQFRATLQGTPTNDLQ----FCVESGDSS---VQTSEAFEAVFINSGDNPFELIKDSI-KILEKHKGTF 182 (724)
Q Consensus 111 ~~y~v~Lpls~g~~ra~l~~~~~~~~~----i~~~sg~~~---~~~~~~~~~v~v~~g~dp~~~i~~A~-~~~~~~~~tf 182 (724)
.+|++.|..| |+|++-.+-+..+... +...+++-. .+.. .++.++|...+.....|++++ .++++++-.
T Consensus 208 ~V~gf~l~~S-gnf~~f~ev~q~~~~~Vq~g~l~~~~e~~l~~~e~f-~tpe~lv~~edqgl~~lsq~y~~~v~~~i~~- 284 (687)
T COG3345 208 EVYGFGLTYS-GNFAAFVEVHQHPFFRVQDGILPFDGEWFLEEFESF-VTPEVLVVLEDQGLNGLSQKYAELVRMEIVP- 284 (687)
T ss_pred eEEEEEEeec-cchhheeeeccCchhhhhhcccccCceEeccccccc-CCceEEEEEcCCCcchHHHHHHHHHHhhcCc-
Confidence 3899999998 6677777665433221 112222211 1111 244555555555578889988 567766532
Q ss_pred CCccccccCcccccccccchhhhhhccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCcccccccccccc
Q 046494 183 SHLENKKIPRHLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLV 262 (724)
Q Consensus 183 ~~~~~k~~P~~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~ 262 (724)
+.+.+|++| +|||||+|+|.++|++.|++.++.+++.|++ +++||||||..++|+. ..|+
T Consensus 285 ~~~~~kprP-----i~~nsWea~Yfd~t~e~ile~vk~akk~gvE--~FvlDDGwfg~rndd~-------------~slG 344 (687)
T COG3345 285 RPRVKKPRP-----IGWNSWEAYYFDFTEEEILENVKEAKKFGVE--LFVLDDGWFGGRNDDL-------------KSLG 344 (687)
T ss_pred ccccCCCCc-----ceeeceeeeeecCCHHHHHHHHHHHhhcCeE--EEEEccccccccCcch-------------hhhh
Confidence 334566766 8999999999999999999999999999977 9999999999888754 3578
Q ss_pred ccccC-CCCCCCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccccCCCCCCchhhhh--hhhccccc---cCC-cc--
Q 046494 263 DIKEN-CKFNSSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKK--DIAMDSLE---KYG-VG-- 333 (724)
Q Consensus 263 ~~~~n-~KFP~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~--d~~~~~~~---~~G-~g-- 333 (724)
||-.| +||| +|+..+++.|++ .|++ +|+|.++. .|+-+|+.+++ ||.++.-. ..| ..
T Consensus 345 DWlv~seKfP--------sgiE~li~~I~e-~Gl~-fGIWlePe----mvs~dSdlfrqHPDWvvk~~G~p~~~~Rnqyv 410 (687)
T COG3345 345 DWLVNSEKFP--------SGIEELIEAIAE-NGLI-FGIWLEPE----MVSEDSDLFRQHPDWVVKVNGYPLMAGRNQYV 410 (687)
T ss_pred ceecchhhcc--------ccHHHHHHHHHH-cCCc-cceeecch----hcccchHHHhhCCCeEEecCCccccccccchh
Confidence 88866 8999 899999999999 7999 99999985 68899988888 99886311 111 22
Q ss_pred --ccChhHHHHHHHHHHHHHhhcCCCEEEEccccchhhccCCCCCh-hhHHHHHHHHHHHHHHhhCCCCceEeeccCCC-
Q 046494 334 --IIDPQKIFDFYNDLHSYLANSGVDGVKVDVQSLMETLGSGYGGR-VLLTRQYQQALEQSVAWNFKDNNLICCMSHNS- 409 (724)
Q Consensus 334 --~v~p~da~~fy~~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g~-~~l~~ay~~Al~~s~~~~f~~~~iI~cMs~~~- 409 (724)
.-.|.-+...+.++...|-..-|||+|+|+...+-.++...-+. +......|+-.+. +..+|+...+.+|.+...
T Consensus 411 l~~s~p~vv~~l~~~l~qll~~~~v~ylkwdmnr~l~klg~~~~~~l~qqry~ly~l~~~-l~~k~~~i~FeScasGg~r 489 (687)
T COG3345 411 LWLSNPIVVLDLSEDLVQLLLFHLVSYLKWDMNRELFKLGFLFWGALPQQRYQLYRLFDQ-LNLKFPHILFESCASGGER 489 (687)
T ss_pred hhccChHHHHHhhhHHHHHHHhhhHHHHHHHhCcceeecCCCCCccccchHHHHHHHHHH-hhhcCCCchhhhhcccccc
Confidence 22566666666666666666677777777766543333221111 1112233666666 677888877888888753
Q ss_pred ---------cccccccc------cceEeecCCCCCC--C-------cchhhHHHHHHHHhhhh--ccCCCCCCccccccc
Q 046494 410 ---------YSLYSSMK------SAVARASEDFMPG--E-------PTFQTLHIASVAFNSLL--LGEIVVPDWDMFQSK 463 (724)
Q Consensus 410 ---------~~~~~~~~------~~~~R~SdDf~p~--~-------p~~~~~hi~~~a~nsl~--~g~~~~pDwDMf~s~ 463 (724)
..+|.+.. ..+.|.+-+++|. + |+-+.-.+.+++...+. +|+ .-.|.|..+-+
T Consensus 490 ~d~gml~~~~~~w~Sd~~dAi~r~~iqrg~s~~~P~~~mGaHi~~~p~h~~~rm~~l~~rg~~a~~g~-~g~elD~~~ls 568 (687)
T COG3345 490 IDKGMLEYSPQLWCSDLTDAIGRLDIQRGGSYTYPPESMGAHISAVPNHQARRMTSLETRGLVAHFGF-WGYELDCTILS 568 (687)
T ss_pred cchHHhhhcccccCCCCcchhhhccccccCcccCChHHhhhhccCCCcHHHhhhhhhhhhhHHHHhhh-hccCCCcccCC
Confidence 23455432 3457999999992 2 21111112223333333 233 34677777766
Q ss_pred cccH-------HHHHHHHHhcCCcEEEe-cCCC
Q 046494 464 HETA-------EFHATARALGGCAVYVS-DKPG 488 (724)
Q Consensus 464 h~~a-------~~HaaaraisggPvyis-D~pg 488 (724)
.++. .+|--.|-+.---+..+ |.|.
T Consensus 569 deek~~~akqialyke~r~vl~~g~~~rld~pd 601 (687)
T COG3345 569 DEEKDLTAKQIALYKELRPVLDNGIIYRLDLPD 601 (687)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccEEeecCCc
Confidence 5432 34444455444334444 5564
No 15
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase. Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=99.46 E-value=3.3e-13 Score=145.13 Aligned_cols=138 Identities=20% Similarity=0.404 Sum_probs=105.2
Q ss_pred ccccccccchhhhhhccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCcccccccccccccccc-CCCCC
Q 046494 193 HLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKE-NCKFN 271 (724)
Q Consensus 193 ~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~-n~KFP 271 (724)
.+....||||++++..+|++.|++.++.+++.|+|+..++|||+||+..+ +|+- ++|||
T Consensus 11 ~~~~p~W~~W~~~~~~~s~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~g--------------------~f~~d~~~FP 70 (303)
T cd06592 11 MFRSPIWSTWARYKADINQETVLNYAQEIIDNGFPNGQIEIDDNWETCYG--------------------DFDFDPTKFP 70 (303)
T ss_pred HhCCCccCChhhhccCcCHHHHHHHHHHHHHcCCCCCeEEeCCCccccCC--------------------ccccChhhCC
Confidence 46778899999999999999999999999999999999999999996433 2553 46999
Q ss_pred CCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccccCCCCCCchhhhh----hhhccccc---------cCCc-cccC-
Q 046494 272 SSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKK----DIAMDSLE---------KYGV-GIID- 336 (724)
Q Consensus 272 ~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~----d~~~~~~~---------~~G~-g~v~- 336 (724)
+++.++++||+ .|+| +.+|..+. |.++++.+++ ++.+.... ..|. +++|
T Consensus 71 ---------dp~~mi~~l~~-~G~k-~~l~i~P~-----i~~~s~~~~e~~~~g~~vk~~~g~~~~~~~~w~g~~~~~Df 134 (303)
T cd06592 71 ---------DPKGMIDQLHD-LGFR-VTLWVHPF-----INTDSENFREAVEKGYLVSEPSGDIPALTRWWNGTAAVLDF 134 (303)
T ss_pred ---------CHHHHHHHHHH-CCCe-EEEEECCe-----eCCCCHHHHhhhhCCeEEECCCCCCCcccceecCCcceEeC
Confidence 68999999999 7999 89999874 6666644443 32222110 0122 2232
Q ss_pred -hhHHHHHHHHHHHHHh-hcCCCEEEEccccc
Q 046494 337 -PQKIFDFYNDLHSYLA-NSGVDGVKVDVQSL 366 (724)
Q Consensus 337 -p~da~~fy~~~~~~La-s~GVD~VKvD~q~~ 366 (724)
.++|+++|.+.++.+. ++|||++|.|++-.
T Consensus 135 tnp~a~~w~~~~~~~~~~~~Gvdg~w~D~~E~ 166 (303)
T cd06592 135 TNPEAVDWFLSRLKSLQEKYGIDSFKFDAGEA 166 (303)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCcEEEeCCCCc
Confidence 2568888887777665 99999999999763
No 16
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose. YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes.
Probab=99.19 E-value=9.6e-10 Score=118.53 Aligned_cols=126 Identities=21% Similarity=0.330 Sum_probs=95.2
Q ss_pred hccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCccccccccccccccccC-CCCCCCCCCCCCCcHHHH
Q 046494 207 KQVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKEN-CKFNSSGSDNSCNDLHEF 285 (724)
Q Consensus 207 ~~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n-~KFP~~~~~~~~~GLk~l 285 (724)
...|++.|++.++.+++.|||+..++|||+|+... ++.+|.-| +||| .++++
T Consensus 19 ~y~~~~~v~~~~~~~~~~~iP~d~~~lD~~w~~~~------------------~~~~f~~d~~~FP---------d~~~~ 71 (308)
T cd06593 19 FYYDEEEVNEFADGMRERNLPCDVIHLDCFWMKEF------------------QWCDFEFDPDRFP---------DPEGM 71 (308)
T ss_pred cCCCHHHHHHHHHHHHHcCCCeeEEEEecccccCC------------------cceeeEECcccCC---------CHHHH
Confidence 34899999999999999999999999999999432 12357755 7999 67999
Q ss_pred HHHHHHHcCCceEEeeeccccccCCCCCCchhhhh----hhhccccc----c----CC-ccccC--hhHHHHHHHHHHHH
Q 046494 286 IDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKK----DIAMDSLE----K----YG-VGIID--PQKIFDFYNDLHSY 350 (724)
Q Consensus 286 v~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~----d~~~~~~~----~----~G-~g~v~--p~da~~fy~~~~~~ 350 (724)
++++|+ .|+| +.+|..+. |.++++.+++ ++.+.... . .| .+++| .+++++||.+.++.
T Consensus 72 i~~l~~-~G~~-~~~~~~P~-----i~~~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~ 144 (308)
T cd06593 72 LSRLKE-KGFK-VCLWINPY-----IAQKSPLFKEAAEKGYLVKKPDGSVWQWDLWQPGMGIIDFTNPDACKWYKDKLKP 144 (308)
T ss_pred HHHHHH-CCCe-EEEEecCC-----CCCCchhHHHHHHCCeEEECCCCCeeeecccCCCcccccCCCHHHHHHHHHHHHH
Confidence 999998 7999 89999873 6676644333 33332211 0 11 12343 35788999999999
Q ss_pred HhhcCCCEEEEccccc
Q 046494 351 LANSGVDGVKVDVQSL 366 (724)
Q Consensus 351 Las~GVD~VKvD~q~~ 366 (724)
|.+.|||++|.|.+..
T Consensus 145 ~~~~Gid~~~~D~~e~ 160 (308)
T cd06593 145 LLDMGVDCFKTDFGER 160 (308)
T ss_pred HHHhCCcEEecCCCCC
Confidence 9999999999999864
No 17
>PRK10658 putative alpha-glucosidase; Provisional
Probab=98.90 E-value=1.3e-07 Score=111.72 Aligned_cols=166 Identities=19% Similarity=0.301 Sum_probs=117.4
Q ss_pred EEEEecCChhHHHHHHHHHHHHhcCcCCCccccccCcccccccccchhhhhhccCHHHHHHHHHHHHHCCCCCcEEEEec
Q 046494 156 VFINSGDNPFELIKDSIKILEKHKGTFSHLENKKIPRHLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPRFLVIDD 235 (724)
Q Consensus 156 v~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~~viIDD 235 (724)
.|+-.|++|-+++++..++. +. ..-+|.|.-++=.|+ .|+.+.+++.|++.++.+++.|||+..+.||+
T Consensus 238 yy~~~G~tp~~v~~~Yt~LT----Gr-----p~lpP~WalG~w~s~--~~~~~~~e~~v~~~~~~~r~~~iP~d~i~lD~ 306 (665)
T PRK10658 238 YFVIDGPTPKEVLDRYTALT----GR-----PALPPAWSFGLWLTT--SFTTNYDEATVNSFIDGMAERDLPLHVFHFDC 306 (665)
T ss_pred EEEEeCCCHHHHHHHHHHHh----CC-----CCCCchhhhheeeec--ccccCCCHHHHHHHHHHHHHcCCCceEEEEch
Confidence 67778999988888765532 21 123566654443343 25556789999999999999999999999999
Q ss_pred CcCcCccCCCCCCCCccccccccccccccc-cCCCCCCCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccccCCCCCC
Q 046494 236 GWQETINEFCKDGEPLIEGTQFAIRLVDIK-ENCKFNSSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLPS 314 (724)
Q Consensus 236 GWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~-~n~KFP~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~ 314 (724)
.|++... |.+|+ +.++|| ..+.+++++|+ .|+| +.+|..+ +|.++
T Consensus 307 ~w~~~~~------------------~~~f~wd~~~FP---------dp~~mi~~L~~-~G~k-~~~~i~P-----~i~~~ 352 (665)
T PRK10658 307 FWMKEFQ------------------WCDFEWDPRTFP---------DPEGMLKRLKA-KGLK-ICVWINP-----YIAQK 352 (665)
T ss_pred hhhcCCc------------------eeeeEEChhhCC---------CHHHHHHHHHH-CCCE-EEEeccC-----CcCCC
Confidence 9986421 33466 347999 66899999999 6999 8899875 36676
Q ss_pred chhhhh----hhhccccc---------cCCccccC--hhHHHHHHHHHHHHHhhcCCCEEEEccccc
Q 046494 315 SDIMKK----DIAMDSLE---------KYGVGIID--PQKIFDFYNDLHSYLANSGVDGVKVDVQSL 366 (724)
Q Consensus 315 s~~~~~----d~~~~~~~---------~~G~g~v~--p~da~~fy~~~~~~Las~GVD~VKvD~q~~ 366 (724)
++.+++ ++.++... .++.+++| .++|+++|.+.++.|.+.|||++|.|+...
T Consensus 353 s~~f~e~~~~gy~vk~~~G~~~~~~~W~g~~~~~Dftnp~ar~W~~~~~~~l~d~Gvdgfw~D~gE~ 419 (665)
T PRK10658 353 SPLFKEGKEKGYLLKRPDGSVWQWDKWQPGMAIVDFTNPDACKWYADKLKGLLDMGVDCFKTDFGER 419 (665)
T ss_pred chHHHHHHHCCeEEECCCCCEeeeeecCCCceeecCCCHHHHHHHHHHHHHHHhcCCcEEEecCCce
Confidence 644433 33222110 12234454 357899999999999999999999997643
No 18
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.82 E-value=1.8e-07 Score=100.37 Aligned_cols=204 Identities=18% Similarity=0.123 Sum_probs=124.1
Q ss_pred cCcccccccccchhhhhhccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCccccccccccccccc-cCC
Q 046494 190 IPRHLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIK-ENC 268 (724)
Q Consensus 190 ~P~~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~-~n~ 268 (724)
+|.|.=++=+|.|. + .|++.|++.++.+++.|||+..|.||++|+..+....+ ..++.+|+ +.+
T Consensus 7 ~P~walG~~qsr~~-y---~s~~ev~~v~~~~r~~~iP~D~i~lD~dw~~~~~~~~~-----------~~~~~~ft~d~~ 71 (292)
T cd06595 7 LPRYAFGNWWSRYW-P---YSDEEYLALMDRFKKHNIPLDVLVIDMDWHVTDIPSKY-----------GSGWTGYSWNRK 71 (292)
T ss_pred CchHHHHhHhhCCc-C---CCHHHHHHHHHHHHHhCCCccEEEEecccccccccccc-----------cCCcceeEEChh
Confidence 45565556568763 2 37899999999999999999999999999875432110 01344566 347
Q ss_pred CCCCCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccccCCCCCCchhhhh---hhhccccccCCccc---cChhHHHH
Q 046494 269 KFNSSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKK---DIAMDSLEKYGVGI---IDPQKIFD 342 (724)
Q Consensus 269 KFP~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~---d~~~~~~~~~G~g~---v~p~da~~ 342 (724)
+|| +.+.+++++|+ .|+| +-+|.-+. -++.+..+.+++ +...+.. ..+..+ .+|+-.+-
T Consensus 72 ~FP---------dp~~mi~~Lh~-~G~k-~v~~v~P~---~~~~~~~~~y~~~~~~~~~~~~-~~~~~~~D~tnp~a~~~ 136 (292)
T cd06595 72 LFP---------DPEKLLQDLHD-RGLK-VTLNLHPA---DGIRAHEDQYPEMAKALGVDPA-TEGPILFDLTNPKFMDA 136 (292)
T ss_pred cCC---------CHHHHHHHHHH-CCCE-EEEEeCCC---cccCCCcHHHHHHHHhcCCCcc-cCCeEEecCCCHHHHHH
Confidence 999 77999999999 6999 66888764 134444332222 1111111 112223 35554555
Q ss_pred HHHHHHHHHhhcCCCEEEEccccchhhccCCCCChhhH--HHHHHHHHHHHHHhhCCCCceEeeccCCCcccccccccce
Q 046494 343 FYNDLHSYLANSGVDGVKVDVQSLMETLGSGYGGRVLL--TRQYQQALEQSVAWNFKDNNLICCMSHNSYSLYSSMKSAV 420 (724)
Q Consensus 343 fy~~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l--~~ay~~Al~~s~~~~f~~~~iI~cMs~~~~~~~~~~~~~~ 420 (724)
|++.+++.|.+.|||++|.|++....... .+..... .+..+.... + -..|++|.+-|.... ..+++..
T Consensus 137 w~~~~~~~~~~~Gidg~W~D~~E~~~~~~--~~~~~~~~~~~~~y~~~~----~-~~~r~f~lsRs~~~G---~qry~~~ 206 (292)
T cd06595 137 YFDNVHRPLEKQGVDFWWLDWQQGNRTRT--PGLDPLWWLNHVHYLDSA----R-NGRRPLIFSRWAGLG---SHRYPIG 206 (292)
T ss_pred HHHHHHHHHHhcCCcEEEecCCCCccccc--CCcchHHHHHHHHHHHhh----c-cCCCcEEEEeecccC---CCcCCCc
Confidence 77999999999999999999865321111 1111111 122232222 1 135677777664322 2355656
Q ss_pred EeecCCCCCCCcchh
Q 046494 421 ARASEDFMPGEPTFQ 435 (724)
Q Consensus 421 ~R~SdDf~p~~p~~~ 435 (724)
| |.|....|..+.
T Consensus 207 W--sGD~~s~W~~l~ 219 (292)
T cd06595 207 F--SGDTIISWASLA 219 (292)
T ss_pred c--CCCcccCHHHHH
Confidence 6 788887776543
No 19
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 31 GH31 from CAZY comprises enzymes with several known activities; alpha-glucosidase (3.2.1.20 from EC), alpha-galactosidase (3.2.1.22 from EC); glucoamylase (3.2.1.3 from EC), sucrase-isomaltase (3.2.1.48 from EC); isomaltase (3.2.1.10 from EC); alpha-xylosidase (3.2.1 from EC); alpha-glucan lyase (4.2.2.13 from EC). Glycoside hydrolase family 31 groups a number of glycosyl hydrolases on the basis of sequence similarities [, , ] An aspartic acid has been implicated [] in the catalytic activity of sucrase, isomaltase, and lysosomal alpha-glucosidase.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3L4U_A 3L4X_A 3L4W_A 3L4V_A 3CTT_A 2QMJ_A 2QLY_A 3L4Z_A 3L4Y_A 3L4T_A ....
Probab=98.72 E-value=7.3e-07 Score=100.72 Aligned_cols=161 Identities=24% Similarity=0.376 Sum_probs=104.1
Q ss_pred EEEecCChhHHHHHHHHHHHHhcCcCCCccccccCcccccccccchhhhhhccCHHHHHHHHHHHHHCCCCCcEEEEecC
Q 046494 157 FINSGDNPFELIKDSIKILEKHKGTFSHLENKKIPRHLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPRFLVIDDG 236 (724)
Q Consensus 157 ~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~~viIDDG 236 (724)
|+=.|++|-++|++..++. +. ...+|.|.-++=+|.|.. -|++.|++.++.+++.++|+..+.||++
T Consensus 1 y~~~G~~~~~v~~~y~~lt----G~-----~~~pP~walG~~~~~~~~----~~~~~v~~~i~~~~~~~iP~d~~~iD~~ 67 (441)
T PF01055_consen 1 YFFSGPTPKEVLRQYTELT----GR-----PPLPPRWALGFWQSRWGY----YNQDEVREVIDRYRSNGIPLDVIWIDDD 67 (441)
T ss_dssp EEEEESSHHHHHHHHHHHH----SS-----S----GGGGSEEEEESTB----TSHHHHHHHHHHHHHTT--EEEEEE-GG
T ss_pred CEEeCcCHHHHHHHHHHHH----CC-----CCCCchhhhceEeecCcC----CCHHHHHHHHHHHHHcCCCccceecccc
Confidence 3446888877777765543 21 234677776666676643 5689999999999999999999999999
Q ss_pred cCcCccCCCCCCCCcccccccccccccccc-CCCCCCCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccccCCCCCCc
Q 046494 237 WQETINEFCKDGEPLIEGTQFAIRLVDIKE-NCKFNSSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLPSS 315 (724)
Q Consensus 237 WQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~-n~KFP~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s 315 (724)
|+...++ |+- .++|| +++.+++.+|+ .|+| +.+|..+. |.+.+
T Consensus 68 ~~~~~~~--------------------f~~d~~~FP---------d~~~~~~~l~~-~G~~-~~~~~~P~-----v~~~~ 111 (441)
T PF01055_consen 68 YQDGYGD--------------------FTWDPERFP---------DPKQMIDELHD-QGIK-VVLWVHPF-----VSNDS 111 (441)
T ss_dssp GSBTTBT--------------------T-B-TTTTT---------THHHHHHHHHH-TT-E-EEEEEESE-----EETTT
T ss_pred ccccccc--------------------ccccccccc---------chHHHHHhHhh-CCcE-EEEEeecc-----cCCCC
Confidence 9985432 443 36899 88999999999 6999 88998863 55554
Q ss_pred h---hhhh----hhhccccc--------cCC-ccccC--hhHHHHHHHHHHHHHhhc-CCCEEEEccccc
Q 046494 316 D---IMKK----DIAMDSLE--------KYG-VGIID--PQKIFDFYNDLHSYLANS-GVDGVKVDVQSL 366 (724)
Q Consensus 316 ~---~~~~----d~~~~~~~--------~~G-~g~v~--p~da~~fy~~~~~~Las~-GVD~VKvD~q~~ 366 (724)
. .+++ ++.++... -.| .+++| .++++++|.+.++.+.+. |||++|.|.+-.
T Consensus 112 ~~~~~~~~~~~~~~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gvdg~w~D~~E~ 181 (441)
T PF01055_consen 112 PDYENYDEAKEKGYLVKNPDGSPYIGRVWPGKGGFIDFTNPEARDWWKEQLKELLDDYGVDGWWLDFGEP 181 (441)
T ss_dssp TB-HHHHHHHHTT-BEBCTTSSB-EEEETTEEEEEB-TTSHHHHHHHHHHHHHHHTTST-SEEEEESTTT
T ss_pred CcchhhhhHhhcCceeecccCCcccccccCCcccccCCCChhHHHHHHHHHHHHHhccCCceEEeecCCc
Confidence 4 3332 33332111 111 22343 256889987777767666 999999999653
No 20
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY. CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.72 E-value=2.8e-07 Score=100.02 Aligned_cols=143 Identities=17% Similarity=0.176 Sum_probs=100.6
Q ss_pred ccCcccccccccchhhhhhccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCccccccccccccccc-cC
Q 046494 189 KIPRHLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIK-EN 267 (724)
Q Consensus 189 ~~P~~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~-~n 267 (724)
-+|.+.-++=.|.|. --+++.|++.++.+++.+||+..|.||++|+..+.+.. ...+|. ..
T Consensus 5 l~P~wa~G~~~s~~~----y~~~~~v~~~~~~~~~~~iP~d~i~lD~~w~~~~~~~~--------------~~~~f~wd~ 66 (317)
T cd06598 5 LPPRWALGNWASRFG----YRNWQEVDDTIKTLREKDFPLDAAILDLYWFGKDIDKG--------------HMGNLDWDR 66 (317)
T ss_pred CCchHHHHHHHhcCC----CCCHHHHHHHHHHHHHhCCCceEEEEechhhcCcccCC--------------ceeeeEecc
Confidence 356665556667763 23789999999999999999999999999997554211 123466 34
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccccCCCCCCchhhhh----hh-hccccc--------cCC-cc
Q 046494 268 CKFNSSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKK----DI-AMDSLE--------KYG-VG 333 (724)
Q Consensus 268 ~KFP~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~----d~-~~~~~~--------~~G-~g 333 (724)
++|| ..+.+++++|+ .|+| +-+|..+. |.++++.+++ .+ ..+... -.| .+
T Consensus 67 ~~FP---------dp~~mi~~L~~-~G~k-~~~~v~P~-----v~~~~~~y~e~~~~g~l~~~~~~~~~~~~~~w~g~~~ 130 (317)
T cd06598 67 KAFP---------DPAGMIADLAK-KGVK-TIVITEPF-----VLKNSKNWGEAVKAGALLKKDQGGVPTLFDFWFGNTG 130 (317)
T ss_pred ccCC---------CHHHHHHHHHH-cCCc-EEEEEcCc-----ccCCchhHHHHHhCCCEEEECCCCCEeeeeccCCCcc
Confidence 7999 67999999999 7999 77887653 6666544433 22 111100 011 12
Q ss_pred ccC--hhHHHHHHHHHHHHHhhcCCCEEEEcccc
Q 046494 334 IID--PQKIFDFYNDLHSYLANSGVDGVKVDVQS 365 (724)
Q Consensus 334 ~v~--p~da~~fy~~~~~~Las~GVD~VKvD~q~ 365 (724)
++| .++++++|.+.++.+.+.|||++|.|++-
T Consensus 131 ~~Dftnp~a~~w~~~~~~~~~~~Gvdg~w~D~~E 164 (317)
T cd06598 131 LIDWFDPAAQAWFHDNYKKLIDQGVTGWWGDLGE 164 (317)
T ss_pred ccCCCCHHHHHHHHHHHHHhhhCCccEEEecCCC
Confidence 333 24589999999999999999999999975
No 21
>PRK10426 alpha-glucosidase; Provisional
Probab=98.71 E-value=5.5e-06 Score=97.79 Aligned_cols=168 Identities=11% Similarity=0.216 Sum_probs=108.3
Q ss_pred EEEEecCChhHHHHHHHHHHHHhcCcCCCccccccCcccc-cccccchhhhhhccCHHHHHHHHHHHHHCCCCCcEEEEe
Q 046494 156 VFINSGDNPFELIKDSIKILEKHKGTFSHLENKKIPRHLD-WFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPRFLVID 234 (724)
Q Consensus 156 v~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~~-~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~~viID 234 (724)
+++-.|++|-++|++..++. +. ...+|.|.- ++ |-.+. -+++.|++.++.+++.|||+..|.||
T Consensus 179 ~y~~~G~~~~~vi~~yt~lt----Gr-----~p~~P~Wal~G~----~~g~~--~~~~~v~~v~~~~r~~~IP~d~i~ld 243 (635)
T PRK10426 179 LRFECADTYISLLEKLTALF----GR-----QPELPDWAYDGV----TLGIQ--GGTEVVQKKLDTMRNAGVKVNGIWAQ 243 (635)
T ss_pred EEEEeCCCHHHHHHHHHHhh----CC-----CCCCChhhccCc----ccccc--CCHHHHHHHHHHHHHcCCCeeEEEEe
Confidence 67778999888888776542 11 123555542 33 22222 25788999999999999999999998
Q ss_pred cCcCcCccCCCCCCCCccccccccccccccc-cCCCCCCCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccccCCCCC
Q 046494 235 DGWQETINEFCKDGEPLIEGTQFAIRLVDIK-ENCKFNSSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLP 313 (724)
Q Consensus 235 DGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~-~n~KFP~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P 313 (724)
| |+..+...-+ .+-+.+|+ +.++|| +.+.+++++|+ .|+| +-+|..+ +|.+
T Consensus 244 d-w~~~~~~~~g-----------~~~~~~~~~d~~~FP---------dp~~mi~~L~~-~G~k-~v~~i~P-----~v~~ 295 (635)
T PRK10426 244 D-WSGIRMTSFG-----------KRLMWNWKWDSERYP---------QLDSRIKQLNE-EGIQ-FLGYINP-----YLAS 295 (635)
T ss_pred c-cccccccccc-----------ccccccceEChhhCC---------CHHHHHHHHHH-CCCE-EEEEEcC-----ccCC
Confidence 5 9865432110 01233466 347899 78999999999 6999 7788765 3666
Q ss_pred Cchhhhh----hhhccccc--------cCC-ccccC--hhHHHHHHHHH-HHHHhhcCCCEEEEccccc
Q 046494 314 SSDIMKK----DIAMDSLE--------KYG-VGIID--PQKIFDFYNDL-HSYLANSGVDGVKVDVQSL 366 (724)
Q Consensus 314 ~s~~~~~----d~~~~~~~--------~~G-~g~v~--p~da~~fy~~~-~~~Las~GVD~VKvD~q~~ 366 (724)
+++.+++ ++.+.... ..+ .+++| .++|+++|.+. ++.|.+.|||++|.|++-.
T Consensus 296 ~~~~y~e~~~~gy~vk~~~g~~~~~~~~~~~~~~~Dftnp~ar~Ww~~~~~~~~~~~Gvdg~w~D~~E~ 364 (635)
T PRK10426 296 DGDLCEEAAEKGYLAKDADGGDYLVEFGEFYAGVVDLTNPEAYEWFKEVIKKNMIGLGCSGWMADFGEY 364 (635)
T ss_pred CCHHHHHHHHCCcEEECCCCCEEEeEecCCCceeecCCCHHHHHHHHHHHHHHHhhcCCCEEeeeCCCC
Confidence 6544443 22221110 011 12333 24688888554 5788999999999998764
No 22
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37. The gene encoding Aec37 (aec-37) is located within a genomic island (AGI-3) isolated from the extraintestinal avian pathogenic Escherichia coli strain BEN2908. The function of Aec37 and its orthologs is unknown; however, deletion of a region of the genome that includes aec-37 affects the assimilation of seven carbohydrates, decreases growth rate of the strain in minimal medium containing galacturonate or trehalose, and attenuates the virulence of E. coli BEN2908 in chickens. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.61 E-value=2e-07 Score=101.17 Aligned_cols=143 Identities=15% Similarity=0.165 Sum_probs=99.2
Q ss_pred cCcccccccccchhhhh--hccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCccccccccccccccc-c
Q 046494 190 IPRHLDWFGWCTWDAFY--KQVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIK-E 266 (724)
Q Consensus 190 ~P~~~~~~GWcTW~af~--~~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~-~ 266 (724)
+|.|.=++=.|.| .|. .+.+++.|++.++.+++.+||+..+.||++|++.... . ..+|. .
T Consensus 6 pP~walG~~~sr~-~Y~~~~~~~q~~v~~~~~~~r~~~iP~d~i~ld~~~~~~~~~-~---------------~~~f~~d 68 (317)
T cd06599 6 VPRWSLGYSGSTM-YYTELDPDAQEALLEFIDKCREHDIPCDSFHLSSGYTSIEGG-K---------------RYVFNWN 68 (317)
T ss_pred CchHHHHHHhcCC-CCCCCCccHHHHHHHHHHHHHHcCCCeeEEEEeccccccCCC-c---------------eeeeecC
Confidence 4556656667777 222 2367999999999999999999999999999986321 0 11244 3
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccccCCCCCCchhhhh----hhhccccc---------cCCcc
Q 046494 267 NCKFNSSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKK----DIAMDSLE---------KYGVG 333 (724)
Q Consensus 267 n~KFP~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~----d~~~~~~~---------~~G~g 333 (724)
.++|| ..+.+++++|+ .|+| +.+|..+. |.++++.+++ ++.+.... -.|.+
T Consensus 69 ~~~FP---------dp~~mi~~L~~-~g~k-~~~~i~P~-----i~~~~~~y~e~~~~g~~v~~~~g~~~~~~~~w~g~~ 132 (317)
T cd06599 69 KDRFP---------DPAAFVAKFHE-RGIR-LAPNIKPG-----LLQDHPRYKELKEAGAFIKPPDGREPSIGQFWGGVG 132 (317)
T ss_pred cccCC---------CHHHHHHHHHH-CCCE-EEEEeCCc-----ccCCCHHHHHHHHCCcEEEcCCCCCcceecccCCCe
Confidence 47999 68999999999 6999 77888764 6666654443 33322111 12222
Q ss_pred -ccC--hhHHHHHHHHHH-HHHhhcCCCEEEEcccc
Q 046494 334 -IID--PQKIFDFYNDLH-SYLANSGVDGVKVDVQS 365 (724)
Q Consensus 334 -~v~--p~da~~fy~~~~-~~Las~GVD~VKvD~q~ 365 (724)
++| .++|+++|...+ +.|.+.|||++|.|.+-
T Consensus 133 ~~~Dftnp~a~~ww~~~~~~~~~~~Gvdg~w~D~~E 168 (317)
T cd06599 133 SFVDFTNPEGREWWKEGVKEALLDLGIDSTWNDNNE 168 (317)
T ss_pred EeecCCChHHHHHHHHHHHHHHhcCCCcEEEecCCC
Confidence 332 246888887665 78899999999999875
No 23
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes
Probab=98.61 E-value=1.7e-06 Score=91.49 Aligned_cols=103 Identities=23% Similarity=0.436 Sum_probs=80.2
Q ss_pred chhhhhhccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCcccccccccccccccc-CCCCCCCCCCCCC
Q 046494 201 TWDAFYKQVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKE-NCKFNSSGSDNSC 279 (724)
Q Consensus 201 TW~af~~~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~-n~KFP~~~~~~~~ 279 (724)
.|-+.+...+++.|++.++.+++.+||...+.|||+|+...++. . ++- .++||
T Consensus 13 ~~~~~~~~~~~~~v~~~~~~~~~~~iP~d~~~lD~~~~~~~~~f-------------~-----~~~d~~~Fp-------- 66 (265)
T cd06589 13 YWLSRYGYGDQDKVLEVIDGMRENDIPLDGFVLDDDYTDGYGDF-------------T-----FDWDAGKFP-------- 66 (265)
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHcCCCccEEEECcccccCCcee-------------e-----eecChhhCC--------
Confidence 45455556799999999999999999999999999999765431 0 243 36899
Q ss_pred CcHHHHHHHHHHHcCCceEEeeeccccccCCCCCCchhhhhhhhccccccCCccccChhHHHHHHHHHHHH-HhhcCCCE
Q 046494 280 NDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKKDIAMDSLEKYGVGIIDPQKIFDFYNDLHSY-LANSGVDG 358 (724)
Q Consensus 280 ~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~d~~~~~~~~~G~g~v~p~da~~fy~~~~~~-Las~GVD~ 358 (724)
..+.+++++|+ .|+| +.+|.. |. ++++|.+.++. +.+.|||+
T Consensus 67 -dp~~~i~~l~~-~g~~-~~~~~~---------P~-------------------------v~~w~~~~~~~~~~~~Gvdg 109 (265)
T cd06589 67 -NPKSMIDELHD-NGVK-LVLWID---------PY-------------------------IREWWAEVVKKLLVSLGVDG 109 (265)
T ss_pred -CHHHHHHHHHH-CCCE-EEEEeC---------hh-------------------------HHHHHHHHHHHhhccCCCCE
Confidence 58999999999 7998 778855 42 14566665554 48999999
Q ss_pred EEEccccc
Q 046494 359 VKVDVQSL 366 (724)
Q Consensus 359 VKvD~q~~ 366 (724)
+|.|++..
T Consensus 110 ~w~D~~E~ 117 (265)
T cd06589 110 FWTDMGEP 117 (265)
T ss_pred EeccCCCC
Confidence 99999764
No 24
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate. XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.
Probab=98.58 E-value=1e-06 Score=95.74 Aligned_cols=138 Identities=14% Similarity=0.129 Sum_probs=96.5
Q ss_pred cCcccccccccchhhhhhccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCcccccccccccccccc-CC
Q 046494 190 IPRHLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKE-NC 268 (724)
Q Consensus 190 ~P~~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~-n~ 268 (724)
+|.+.=++-+|.|.- -+++.|++.++.+++.+||+..++||..|+...+ |.+|.- .+
T Consensus 6 ~P~walG~~~sr~~y----~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~~------------------~~~f~~d~~ 63 (319)
T cd06591 6 MPKWAYGFWQSKERY----KTQEELLDVAKEYRKRGIPLDVIVQDWFYWPKQG------------------WGEWKFDPE 63 (319)
T ss_pred CchHHHHHHHhcccC----CCHHHHHHHHHHHHHhCCCccEEEEechhhcCCC------------------ceeEEEChh
Confidence 455555566677632 3889999999999999999999999998875322 334663 47
Q ss_pred CCCCCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccccCCCCCCchhhhh----hhhccccc-------cCC-ccccC
Q 046494 269 KFNSSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKK----DIAMDSLE-------KYG-VGIID 336 (724)
Q Consensus 269 KFP~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~----d~~~~~~~-------~~G-~g~v~ 336 (724)
||| ..+.+++++|+ .|+| +-+|..+ .|.++++.+++ ++.++... -.| .+++|
T Consensus 64 ~FP---------dp~~mi~~L~~-~G~k-v~~~i~P-----~v~~~~~~y~e~~~~g~~v~~~~g~~~~~~w~g~~~~~D 127 (319)
T cd06591 64 RFP---------DPKAMVRELHE-MNAE-LMISIWP-----TFGPETENYKEMDEKGYLIKTDRGPRVTMQFGGNTRFYD 127 (319)
T ss_pred hCC---------CHHHHHHHHHH-CCCE-EEEEecC-----CcCCCChhHHHHHHCCEEEEcCCCCeeeeeCCCCccccC
Confidence 999 67999999998 7999 6778765 36666544333 33332211 112 23443
Q ss_pred --hhHHHHH-HHHHHHHHhhcCCCEEEEcccc
Q 046494 337 --PQKIFDF-YNDLHSYLANSGVDGVKVDVQS 365 (724)
Q Consensus 337 --p~da~~f-y~~~~~~Las~GVD~VKvD~q~ 365 (724)
.++++++ ++.+++.|.+.|||++|.|++-
T Consensus 128 ftnp~a~~w~~~~~~~~~~~~Gvdg~w~D~~E 159 (319)
T cd06591 128 ATNPEAREYYWKQLKKNYYDKGVDAWWLDAAE 159 (319)
T ss_pred CCCHHHHHHHHHHHHHHhhcCCCcEEEecCCC
Confidence 2356665 5678888999999999999985
No 25
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ. CtsY and CtsZ both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.58 E-value=3.5e-06 Score=92.45 Aligned_cols=152 Identities=16% Similarity=0.278 Sum_probs=93.8
Q ss_pred ccCcccccccccchhhhhhccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCcc-----CCCCCCCCccccccccccccc
Q 046494 189 KIPRHLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETIN-----EFCKDGEPLIEGTQFAIRLVD 263 (724)
Q Consensus 189 ~~P~~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~-----d~~~~~~~~~~~~~~~~~L~~ 263 (724)
-+|.+.-++..|.|. --+++.|++.++.+++.|||+..|.||| ||..+. |-+.- .......|. +.+
T Consensus 5 lpP~walG~~~sr~~----Y~~~~ev~~v~~~~~~~~iP~d~i~lD~-W~~~~~~~~w~d~~y~--~~~~~~~~~--~~~ 75 (340)
T cd06597 5 LLPKWAFGLWMSANE----WDTQAEVMRQMDAHEEHGIPVTVVVIEQ-WSDEATFYVFNDAQYT--PKDGGAPLS--YDD 75 (340)
T ss_pred CCchHHhhhhhhccC----CCCHHHHHHHHHHHHHcCCCeeEEEEec-ccCcceeeeeccchhc--ccccCCcce--ecc
Confidence 356666667777763 3688999999999999999999999996 987532 10000 000000111 112
Q ss_pred --cccCCCCCCCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccccCCCCCCc-----------hhhhhhhhccccc--
Q 046494 264 --IKENCKFNSSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLPSS-----------DIMKKDIAMDSLE-- 328 (724)
Q Consensus 264 --~~~n~KFP~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s-----------~~~~~d~~~~~~~-- 328 (724)
|...++|| ..+.+|+++|+ .|+| +-+|..+. |.+++ +++++++.++...
T Consensus 76 ~~f~~~~~FP---------dp~~mi~~Lh~-~G~k-v~l~v~P~-----i~~~~~~~~~~~~~~~~~~~~g~~vk~~~G~ 139 (340)
T cd06597 76 FSFPVEGRWP---------NPKGMIDELHE-QGVK-VLLWQIPI-----IKLRPHPHGQADNDEDYAVAQNYLVQRGVGK 139 (340)
T ss_pred cccCccccCC---------CHHHHHHHHHH-CCCE-EEEEecCc-----cccccccccccchhHHHHHHCCEEEEcCCCC
Confidence 22235788 78999999999 6998 78898763 33321 1222233322110
Q ss_pred -------cCCc-cccC--hhHHHHHHHHHHHHHh-hcCCCEEEEcccc
Q 046494 329 -------KYGV-GIID--PQKIFDFYNDLHSYLA-NSGVDGVKVDVQS 365 (724)
Q Consensus 329 -------~~G~-g~v~--p~da~~fy~~~~~~La-s~GVD~VKvD~q~ 365 (724)
-.|. +++| .++|+++|.+.++.+. +.|||++|.|+.-
T Consensus 140 ~~~~~~~W~g~~~~~Dftnp~a~~Ww~~~~~~~~~~~Gidg~w~D~~E 187 (340)
T cd06597 140 PYRIPGQWFPDSLMLDFTNPEAAQWWMEKRRYLVDELGIDGFKTDGGE 187 (340)
T ss_pred ccccccccCCCceeecCCCHHHHHHHHHHHHHHHHhcCCcEEEecCCC
Confidence 0111 2332 2468888888877765 6999999999864
No 26
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities. Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source.
Probab=98.44 E-value=1.2e-06 Score=95.86 Aligned_cols=139 Identities=20% Similarity=0.291 Sum_probs=94.7
Q ss_pred ccCcccccccccchhhhhhccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCccccccccccccccc-cC
Q 046494 189 KIPRHLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIK-EN 267 (724)
Q Consensus 189 ~~P~~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~-~n 267 (724)
-+|.|.=++=.|.|.. -|++.|++.++.+++.|||+..+.||++|+...++ |+ ..
T Consensus 5 l~P~walG~~~s~~~y----~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~~~--------------------f~~d~ 60 (339)
T cd06604 5 LPPKWALGYQQSRWSY----YPEEEVREIADEFRERDIPCDAIYLDIDYMDGYRV--------------------FTWDK 60 (339)
T ss_pred CCchHHHhHHhcCCCC----CCHHHHHHHHHHHHHhCCCcceEEECchhhCCCCc--------------------eeecc
Confidence 3455654444455432 37899999999999999999999999999964322 44 24
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccccCCCCCCchhhhh----hhhccccc--------cCC-ccc
Q 046494 268 CKFNSSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKK----DIAMDSLE--------KYG-VGI 334 (724)
Q Consensus 268 ~KFP~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~----d~~~~~~~--------~~G-~g~ 334 (724)
++|| ..+.+++++|+ .|+| +.+|+.+.- .+.|..+.+++ ++.+.... -.| .++
T Consensus 61 ~~fP---------dp~~m~~~l~~-~g~~-~~~~~~P~v---~~~~~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~ 126 (339)
T cd06604 61 ERFP---------DPKELIKELHE-QGFK-VVTIIDPGV---KVDPGYDVYEEGLENDYFVKDPDGELYIGRVWPGLSAF 126 (339)
T ss_pred ccCC---------CHHHHHHHHHH-CCCE-EEEEEeCce---eCCCCChHHHHHHHCCeEEECCCCCEEEEEecCCCccc
Confidence 6999 67999999999 6999 778887631 12233322222 22221110 012 123
Q ss_pred cC--hhHHHHHHHHHHHHHhhcCCCEEEEcccc
Q 046494 335 ID--PQKIFDFYNDLHSYLANSGVDGVKVDVQS 365 (724)
Q Consensus 335 v~--p~da~~fy~~~~~~Las~GVD~VKvD~q~ 365 (724)
+| .++|++||.+.++.+.+.|||++|.|.+.
T Consensus 127 ~Dftnp~a~~ww~~~~~~~~~~Gvdg~w~D~~E 159 (339)
T cd06604 127 PDFTNPKVREWWGSLYKKFVDLGVDGIWNDMNE 159 (339)
T ss_pred cCCCChHHHHHHHHHHHHHhhCCCceEeecCCC
Confidence 33 24688899999998999999999999875
No 27
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride. Orthologs of YihQ that have not yet been functionally characterized are present in plants and fungi. YihQ has sequence similarity to other GH31 enzymes such as CtsZ, a 6-alpha-glucosyltransferase from Bacillus globisporus, and YicI, an alpha-xylosidase from Echerichia coli. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation.
Probab=98.44 E-value=1.6e-05 Score=86.57 Aligned_cols=145 Identities=14% Similarity=0.195 Sum_probs=93.1
Q ss_pred ccCcccccccccchhhhhhccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCccccccccccccccc-cC
Q 046494 189 KIPRHLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIK-EN 267 (724)
Q Consensus 189 ~~P~~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~-~n 267 (724)
-+|.+.-++=+|.+. . +++.|++.++.+++.|||+..+.|| .|+.......+ . +.+.+|+ +.
T Consensus 5 ~~P~wa~G~~~~~~~---~--s~~~v~~~~~~~~~~~iP~d~i~ld-dw~~~~~~~~g--------~---~~~~~f~~d~ 67 (317)
T cd06594 5 ELPDWAYGGAILGLQ---G--GTDKVLEALEKARAAGVKVAGLWLQ-DWTGRRETSFG--------D---RLWWNWEWDP 67 (317)
T ss_pred CCchhhhCcEEeeee---C--CHHHHHHHHHHHHHcCCCeeEEEEc-cccCccccccc--------c---eeeeeeEECh
Confidence 356676655555542 2 9999999999999999999999999 48753211110 0 1123455 34
Q ss_pred CCCCCCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccccCCCCCCchhh-hh----hhhccccc--------cCCc-c
Q 046494 268 CKFNSSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIM-KK----DIAMDSLE--------KYGV-G 333 (724)
Q Consensus 268 ~KFP~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~-~~----d~~~~~~~--------~~G~-g 333 (724)
++|| ..+.+|+++|+ .|+| +-+|.-+ +|.+++..+ ++ ++.++... ..|. .
T Consensus 68 ~~FP---------dp~~mi~~Lh~-~G~~-~~~~i~P-----~v~~~~~~~y~~~~~~g~~vk~~~g~~~~~~~w~g~~~ 131 (317)
T cd06594 68 ERYP---------GLDELIEELKA-RGIR-VLTYINP-----YLADDGPLYYEEAKDAGYLVKDADGSPYLVDFGEFDCG 131 (317)
T ss_pred hhCC---------CHHHHHHHHHH-CCCE-EEEEecC-----ceecCCchhHHHHHHCCeEEECCCCCeeeeccCCCCce
Confidence 7999 68999999999 6999 7788775 355544331 22 33332111 0121 2
Q ss_pred ccC--hhHHHHHHHHHH-HHHhhcCCCEEEEccccc
Q 046494 334 IID--PQKIFDFYNDLH-SYLANSGVDGVKVDVQSL 366 (724)
Q Consensus 334 ~v~--p~da~~fy~~~~-~~Las~GVD~VKvD~q~~ 366 (724)
++| .++|+++|.+.+ +++.+.|||++|.|++-.
T Consensus 132 ~~Dftnp~a~~ww~~~~~~~~~~~Gvdg~w~D~~E~ 167 (317)
T cd06594 132 VLDLTNPAARDWFKQVIKEMLLDLGLSGWMADFGEY 167 (317)
T ss_pred eeecCCHHHHHHHHHHHHHHhhhcCCcEEEecCCCC
Confidence 232 245777875554 455889999999998754
No 28
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of
Probab=98.34 E-value=2.4e-05 Score=85.91 Aligned_cols=194 Identities=15% Similarity=0.088 Sum_probs=116.4
Q ss_pred cCcccccccccchhhhhhccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCcccccccccccccccc-CC
Q 046494 190 IPRHLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKE-NC 268 (724)
Q Consensus 190 ~P~~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~-n~ 268 (724)
+|.|.-++=+|.|.. -+++.|++.++.+++.+||+..+.||++|+...++ |+- .+
T Consensus 6 pP~walG~~~s~~~y----~~~~~v~~~~~~~r~~~iP~d~i~lD~~~~~~~~~--------------------f~~d~~ 61 (339)
T cd06602 6 PPYWALGFHLCRWGY----KNVDEVKEVVENMRAAGIPLDVQWNDIDYMDRRRD--------------------FTLDPV 61 (339)
T ss_pred CchHHhhhHhcCCCC----CCHHHHHHHHHHHHHhCCCcceEEECcccccCccc--------------------eecccc
Confidence 566766677788743 36899999999999999999999999999965432 443 36
Q ss_pred CCCCCCCCCCCCcH--HHHHHHHHHHcCCceEEeeeccccccCCCCCC-----chhh----hhhhhccccc--------c
Q 046494 269 KFNSSGSDNSCNDL--HEFIDEIKEKYGLKYVYMWHALAGYWGGVLPS-----SDIM----KKDIAMDSLE--------K 329 (724)
Q Consensus 269 KFP~~~~~~~~~GL--k~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~-----s~~~----~~d~~~~~~~--------~ 329 (724)
+|| .. +.+|+++|+ .|+| +-+|+.+. |.++ .+.+ +++..++... -
T Consensus 62 ~FP---------dp~~~~mi~~L~~-~G~k-~~~~i~P~-----v~~~~~~~~~~~~~e~~~~g~~v~~~~g~~~~~~~w 125 (339)
T cd06602 62 RFP---------GLKMPEFVDELHA-NGQH-YVPILDPA-----ISANEPTGSYPPYDRGLEMDVFIKNDDGSPYIGKVW 125 (339)
T ss_pred cCC---------CccHHHHHHHHHH-CCCE-EEEEEeCc-----cccCcCCCCCHHHHHHHHCCeEEECCCCCEEEEEeC
Confidence 899 45 999999999 6999 78888753 4443 2222 2222221100 0
Q ss_pred CCc-cccC--hhHHHHHHHHHHHH-HhhcCCCEEEEccccchhhccCCCCCh-hhHHHHHHHHHHHHHHhhCCCCceEee
Q 046494 330 YGV-GIID--PQKIFDFYNDLHSY-LANSGVDGVKVDVQSLMETLGSGYGGR-VLLTRQYQQALEQSVAWNFKDNNLICC 404 (724)
Q Consensus 330 ~G~-g~v~--p~da~~fy~~~~~~-Las~GVD~VKvD~q~~l~~l~~~~~g~-~~l~~ay~~Al~~s~~~~f~~~~iI~c 404 (724)
.|. +++| .++|+++|.+.++. +.+.|||++|.|++-.... ..-+.-- -..+++.++++++. -..++.+.+
T Consensus 126 ~g~~~~~Dftnp~a~~ww~~~~~~~~~~~Gvdg~w~D~~Ep~~~-~~~hN~y~~~~~~~~~~~~~~~----~~~r~~~~s 200 (339)
T cd06602 126 PGYTVFPDFLNPNTQEWWTDEIKDFHDQVPFDGLWIDMNEPSNF-YDVHNLYGLSEAIATYKALQSI----PGKRPFVIS 200 (339)
T ss_pred CCCCcCcCCCCHHHHHHHHHHHHHHHhcCCCcEEEecCCCCchH-hhhcchhhHHHHHHHHHHHHhc----CCCCCEEEE
Confidence 221 2332 24578888877765 5668999999998653211 0001000 12233445554442 234567777
Q ss_pred ccCCCcccccccccceEeecCCCCCCCcc
Q 046494 405 MSHNSYSLYSSMKSAVARASEDFMPGEPT 433 (724)
Q Consensus 405 Ms~~~~~~~~~~~~~~~R~SdDf~p~~p~ 433 (724)
-|.... ..+++. . -|.|...+|..
T Consensus 201 Rs~~~G---~qry~~-~-w~GD~~s~W~~ 224 (339)
T cd06602 201 RSTFPG---SGRYAG-H-WLGDNASTWED 224 (339)
T ss_pred ecCccc---ccccce-e-ECCCccCCHHH
Confidence 665422 113332 2 34556665553
No 29
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end. GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes.
Probab=98.30 E-value=3.8e-06 Score=91.83 Aligned_cols=125 Identities=20% Similarity=0.243 Sum_probs=90.7
Q ss_pred cCcccccccccchhhhhhccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCcccccccccccccccc-CC
Q 046494 190 IPRHLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKE-NC 268 (724)
Q Consensus 190 ~P~~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~-n~ 268 (724)
+|.|.=++-.|.|.- -|++.|++.++.+++.+||+..+.||+.|++..++ |.- .+
T Consensus 6 pP~WalG~~qsr~~Y----~~~~ev~~v~~~~r~~~IP~D~i~lDidy~~~~~~--------------------Ft~d~~ 61 (332)
T cd06601 6 KPRYALGFHQGCYGY----SNRSDLEEVVEGYRDNNIPLDGLHVDVDFQDNYRT--------------------FTTNGG 61 (332)
T ss_pred CchHHhhhhhCCCCC----CCHHHHHHHHHHHHHcCCCCceEEEcCchhcCCCc--------------------eeecCC
Confidence 455666666777742 38899999999999999999999999999964432 443 47
Q ss_pred CCCCCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccccCCCCCCchhhhhhhhccccccCCccccC--hhHHHHHHHH
Q 046494 269 KFNSSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKKDIAMDSLEKYGVGIID--PQKIFDFYND 346 (724)
Q Consensus 269 KFP~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~d~~~~~~~~~G~g~v~--p~da~~fy~~ 346 (724)
+|| ..++++++||+ .|+| +.+|..+..-.+...|. .+ .++| .++++++|.+
T Consensus 62 ~FP---------dp~~mv~~L~~-~G~k-lv~~i~P~i~~g~~~~~---------------~~-~~pDftnp~ar~wW~~ 114 (332)
T cd06601 62 GFP---------NPKEMFDNLHN-KGLK-CSTNITPVISYGGGLGS---------------PG-LYPDLGRPDVREWWGN 114 (332)
T ss_pred CCC---------CHHHHHHHHHH-CCCe-EEEEecCceecCccCCC---------------Cc-eeeCCCCHHHHHHHHH
Confidence 899 57999999998 7999 56665543211111111 01 1222 2568889999
Q ss_pred HHHHHhhcCCCEEEEcccc
Q 046494 347 LHSYLANSGVDGVKVDVQS 365 (724)
Q Consensus 347 ~~~~Las~GVD~VKvD~q~ 365 (724)
.++.|.+.|||+++.|++-
T Consensus 115 ~~~~l~~~Gv~~~W~DmnE 133 (332)
T cd06601 115 QYKYLFDIGLEFVWQDMTT 133 (332)
T ss_pred HHHHHHhCCCceeecCCCC
Confidence 9999999999999999863
No 30
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do
Probab=98.29 E-value=2.6e-05 Score=84.87 Aligned_cols=136 Identities=14% Similarity=0.200 Sum_probs=93.2
Q ss_pred cCcccccccccchhhhhhccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCccccccccccccccc-cCC
Q 046494 190 IPRHLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIK-ENC 268 (724)
Q Consensus 190 ~P~~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~-~n~ 268 (724)
+|.+.-++=.|.|. | -|++.|++.++.+++.+||...+.||++|++..++ |. +.+
T Consensus 6 pP~walG~~~sr~~-y---~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~~~--------------------f~~d~~ 61 (317)
T cd06600 6 PPMWALGYHISRYS-Y---YPQDKVVEVVDIMQKEGFPYDVVFLDIHYMDSYRL--------------------FTWDPY 61 (317)
T ss_pred CchHHHHHHhcCCC-C---CCHHHHHHHHHHHHHcCCCcceEEEChhhhCCCCc--------------------eeechh
Confidence 45565566667764 2 37899999999999999999999999999864322 33 346
Q ss_pred CCCCCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccccCCCCCCc--hhh----hhhhhccccc--------cCCcc-
Q 046494 269 KFNSSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLPSS--DIM----KKDIAMDSLE--------KYGVG- 333 (724)
Q Consensus 269 KFP~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s--~~~----~~d~~~~~~~--------~~G~g- 333 (724)
+|| ..+.+++++|+ .|+| +-+|+.+. |.+++ +.+ ++++.++... -.|.+
T Consensus 62 ~FP---------dp~~~i~~l~~-~g~k-~~~~~~P~-----i~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~w~G~~~ 125 (317)
T cd06600 62 RFP---------EPKKLIDELHK-RNVK-LVTIVDPG-----IRVDQNYSPFLSGMDKGKFCEIESGELFVGKMWPGTTV 125 (317)
T ss_pred cCC---------CHHHHHHHHHH-CCCE-EEEEeecc-----ccCCCCChHHHHHHHCCEEEECCCCCeEEEeecCCCcc
Confidence 899 67999999999 6999 77898753 54432 222 2222222110 12222
Q ss_pred ccC--hhHHHHHHHHHHHHHh-hcCCCEEEEcccc
Q 046494 334 IID--PQKIFDFYNDLHSYLA-NSGVDGVKVDVQS 365 (724)
Q Consensus 334 ~v~--p~da~~fy~~~~~~La-s~GVD~VKvD~q~ 365 (724)
++| .+++.++|.+.++.+. +.|||++|.|++-
T Consensus 126 ~~Dftnp~a~~ww~~~~~~~~~~~gvdg~w~D~~E 160 (317)
T cd06600 126 YPDFTNPDTREWWAGLFSEWLNSQGVDGIWLDMNE 160 (317)
T ss_pred ccCCCChHHHHHHHHHHHHHhhcCCCceEEeeCCC
Confidence 333 2457788877776664 8999999999865
No 31
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=98.16 E-value=1.7e-05 Score=84.19 Aligned_cols=126 Identities=21% Similarity=0.303 Sum_probs=80.4
Q ss_pred hhhhccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcHH
Q 046494 204 AFYKQVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKENCKFNSSGSDNSCNDLH 283 (724)
Q Consensus 204 af~~~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n~KFP~~~~~~~~~GLk 283 (724)
.|...+|-+..++.++-.++.|++ |++||+||.....+.. . ++. +.-| ...|+
T Consensus 24 ~~~~g~~t~~~k~yIDfAa~~G~e--YvlvD~GW~~~~~~~~---------~-------d~~--~~~~-------~~dl~ 76 (273)
T PF10566_consen 24 GFKHGATTETQKRYIDFAAEMGIE--YVLVDAGWYGWEKDDD---------F-------DFT--KPIP-------DFDLP 76 (273)
T ss_dssp SS-BSSSHHHHHHHHHHHHHTT-S--EEEEBTTCCGS--TTT------------------TT---B-T-------T--HH
T ss_pred CCcCCCCHHHHHHHHHHHHHcCCC--EEEecccccccccccc---------c-------ccc--ccCC-------ccCHH
Confidence 355578999999999999999999 9999999986332211 0 111 1222 15899
Q ss_pred HHHHHHHHHcCCceEEeeeccccccCCCCCCchhhhhhhhccccccCCccccChhHHHHHHHHHHHHHhhcCCCEEEEcc
Q 046494 284 EFIDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKKDIAMDSLEKYGVGIIDPQKIFDFYNDLHSYLANSGVDGVKVDV 363 (724)
Q Consensus 284 ~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~d~~~~~~~~~G~g~v~p~da~~fy~~~~~~Las~GVD~VKvD~ 363 (724)
.+|++-|+ .|++ |-+|..-.++|+.. + +.. . .++.++.+++|||.+||+|+
T Consensus 77 elv~Ya~~-KgVg-i~lw~~~~~~~~~~-~--------------------~~~-----~-~~~~f~~~~~~Gv~GvKidF 127 (273)
T PF10566_consen 77 ELVDYAKE-KGVG-IWLWYHSETGGNVA-N--------------------LEK-----Q-LDEAFKLYAKWGVKGVKIDF 127 (273)
T ss_dssp HHHHHHHH-TT-E-EEEEEECCHTTBHH-H--------------------HHC-----C-HHHHHHHHHHCTEEEEEEE-
T ss_pred HHHHHHHH-cCCC-EEEEEeCCcchhhH-h--------------------HHH-----H-HHHHHHHHHHcCCCEEeeCc
Confidence 99999999 5988 77886533322210 0 111 1 26677889999999999998
Q ss_pred ccchhhccCCCCChhhHHHHHHHHHHHHHHh
Q 046494 364 QSLMETLGSGYGGRVLLTRQYQQALEQSVAW 394 (724)
Q Consensus 364 q~~l~~l~~~~~g~~~l~~ay~~Al~~s~~~ 394 (724)
... ......+-|++.++++...
T Consensus 128 ~~~---------d~Q~~v~~y~~i~~~AA~~ 149 (273)
T PF10566_consen 128 MDR---------DDQEMVNWYEDILEDAAEY 149 (273)
T ss_dssp -SS---------TSHHHHHHHHHHHHHHHHT
T ss_pred CCC---------CCHHHHHHHHHHHHHHHHc
Confidence 652 2346677888888886443
No 32
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds
Probab=98.11 E-value=0.00014 Score=88.59 Aligned_cols=157 Identities=18% Similarity=0.302 Sum_probs=105.6
Q ss_pred EecCChhHHHHHHHHHHHHhcCcCCCccccccCcccccccccchhhhhhccCHHHHHHHHHHHHHCCCCCcEEEEecCcC
Q 046494 159 NSGDNPFELIKDSIKILEKHKGTFSHLENKKIPRHLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQ 238 (724)
Q Consensus 159 ~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ 238 (724)
.-|.+|-++|++...+. +. ..-+|.|.=++=+|.|. | -|++.|++.++.+++.+||+..+.+|..|+
T Consensus 161 G~gptp~eVi~~Yt~LT----Gr-----p~mpP~WALGy~qSR~~-Y---~sq~eV~eva~~fre~~IP~DvIwlDidYm 227 (978)
T PLN02763 161 GPFPSPEALLTSLSHAI----GT-----VFMPPKWALGYQQCRWS-Y---ESAKRVAEIARTFREKKIPCDVVWMDIDYM 227 (978)
T ss_pred cCCCCHHHHHHHHHHHh----CC-----CCCCchHHhheeeccCC-C---CCHHHHHHHHHHHHHcCCCceEEEEehhhh
Confidence 33478888877766643 22 22356777677778885 2 368999999999999999999999999997
Q ss_pred cCccCCCCCCCCcccccccccccccccc-CCCCCCCCCCCCCCcHHHHHHHHHHHcCCceEEeee-ccccccCCCCCCc-
Q 046494 239 ETINEFCKDGEPLIEGTQFAIRLVDIKE-NCKFNSSGSDNSCNDLHEFIDEIKEKYGLKYVYMWH-ALAGYWGGVLPSS- 315 (724)
Q Consensus 239 ~~~~d~~~~~~~~~~~~~~~~~L~~~~~-n~KFP~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWh-al~GYWgGi~P~s- 315 (724)
...+ .|.- .++|| ..+.+++++|+ .|+|. +|. .+ ||..+.
T Consensus 228 ~g~~--------------------~FTwD~~rFP---------dP~~mv~~Lh~-~G~kv--v~iidP-----gI~~d~g 270 (978)
T PLN02763 228 DGFR--------------------CFTFDKERFP---------DPKGLADDLHS-IGFKA--IWMLDP-----GIKAEEG 270 (978)
T ss_pred cCCC--------------------ceeECcccCC---------CHHHHHHHHHH-CCCEE--EEEEcC-----CCccCCC
Confidence 5322 2443 36899 67999999999 69994 443 22 344321
Q ss_pred -----hhhhhhhhccccc--------cCCc-cccC--hhHHHHHHHHHHHHHhhcCCCEEEEcccc
Q 046494 316 -----DIMKKDIAMDSLE--------KYGV-GIID--PQKIFDFYNDLHSYLANSGVDGVKVDVQS 365 (724)
Q Consensus 316 -----~~~~~d~~~~~~~--------~~G~-g~v~--p~da~~fy~~~~~~Las~GVD~VKvD~q~ 365 (724)
.+.+++..+.... -.|. .++| .+++++||.++++.|.+.|||+++.|++-
T Consensus 271 Y~~y~eg~~~~~fvk~~~G~~y~G~vWpG~~~fpDFTnP~ar~WW~~~~k~l~d~GVDG~W~DmnE 336 (978)
T PLN02763 271 YFVYDSGCENDVWIQTADGKPFVGEVWPGPCVFPDFTNKKTRSWWANLVKDFVSNGVDGIWNDMNE 336 (978)
T ss_pred CHHHHhHhhcCeeEECCCCCeeEeeecCCCccccCCCCHHHHHHHHHHHHHHhcCCCcEEEccCCC
Confidence 1112222221100 0121 1222 35689999999999999999999999974
No 33
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=98.07 E-value=0.00022 Score=85.86 Aligned_cols=224 Identities=19% Similarity=0.242 Sum_probs=139.5
Q ss_pred eEEEEEecCChhHHHHHHHHHHHHhcCcCCCccccccCcccccccccchhhhhhccCHHHHHHHHHHHHHCCCCCcEEEE
Q 046494 154 EAVFINSGDNPFELIKDSIKILEKHKGTFSHLENKKIPRHLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPRFLVI 233 (724)
Q Consensus 154 ~~v~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~~viI 233 (724)
.-.||-.|++|-+++++-... .+ + +.-+|.|. || |.|-..+..-+|+.+.+.++.+++..||+..+.+
T Consensus 234 ldyyv~~G~~~~~vi~~yt~l----TG--k---p~l~P~Wa--~G-~~~~~~~~~~~e~~v~~~i~~~~~~~IP~d~~~l 301 (772)
T COG1501 234 LDYYVIAGPTPKDVLEKYTDL----TG--K---PPLPPKWA--LG-WLWTSRYTYYDEDEVLEFIDEMRERDIPLDVFVL 301 (772)
T ss_pred EEEEEEeCCCHHHHHHHHHHh----hC--C---CCCCCcee--cC-CCceeccccccHHHHHHHHhhcccccCcceEEEE
Confidence 347899999985555544332 22 1 12355665 45 6776777788999999999999999999999999
Q ss_pred ecC-cCcCccCCCCCCCCccccccccccccccccC-CCCCCCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccccCCC
Q 046494 234 DDG-WQETINEFCKDGEPLIEGTQFAIRLVDIKEN-CKFNSSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGYWGGV 311 (724)
Q Consensus 234 DDG-WQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n-~KFP~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi 311 (724)
|=. |-+. +..|+-| .+|| ..|.+++++|+ .|+| +-+|.-+. |
T Consensus 302 D~~~~~~~--------------------~~~F~wd~~~FP---------~pk~mi~~l~~-~Gik-l~~~i~P~-----i 345 (772)
T COG1501 302 DIDFWMDN--------------------WGDFTWDPDRFP---------DPKQMIAELHE-KGIK-LIVIINPY-----I 345 (772)
T ss_pred eehhhhcc--------------------ccceEECcccCC---------CHHHHHHHHHh-cCce-EEEEeccc-----c
Confidence 987 7651 2236644 7999 66899999999 6999 66777653 4
Q ss_pred CCCchhhhh----hhhccccc--------cCC-ccccC--hhHHHHHHH-HHHHHHhhcCCCEEEEccccchhhcc--CC
Q 046494 312 LPSSDIMKK----DIAMDSLE--------KYG-VGIID--PQKIFDFYN-DLHSYLANSGVDGVKVDVQSLMETLG--SG 373 (724)
Q Consensus 312 ~P~s~~~~~----d~~~~~~~--------~~G-~g~v~--p~da~~fy~-~~~~~Las~GVD~VKvD~q~~l~~l~--~~ 373 (724)
..+++.++. .+.++... -.+ ..++| .++++++|- ..++.|.+-|||+.|.|++-..-... .+
T Consensus 346 ~~d~~~~~e~~~~Gy~~k~~~g~~~~~~~w~~~~a~~DFtnp~~r~Ww~~~~~~~l~d~Gv~g~W~D~nEp~~~~~~~~~ 425 (772)
T COG1501 346 KQDSPLFKEAIEKGYFVKDPDGEIYQADFWPGNSAFPDFTNPDAREWWASDKKKNLLDLGVDGFWNDMNEPEPFDGDGFG 425 (772)
T ss_pred ccCCchHHHHHHCCeEEECCCCCEeeecccCCcccccCCCCHHHHHHHHHHHHhHHHhcCccEEEccCCCCccccccccc
Confidence 444433222 22222211 111 23444 257889988 68889999999999999986432211 11
Q ss_pred CCChh---------hHHHHHHHHHHHHHHhhCCCCceEeeccCCCcccccccccceEeecCCCCCCCcc
Q 046494 374 YGGRV---------LLTRQYQQALEQSVAWNFKDNNLICCMSHNSYSLYSSMKSAVARASEDFMPGEPT 433 (724)
Q Consensus 374 ~~g~~---------~l~~ay~~Al~~s~~~~f~~~~iI~cMs~~~~~~~~~~~~~~~R~SdDf~p~~p~ 433 (724)
.+... -.++++++|+++.. . ..+++|.+-|.+...- ..+.+ =|.|.-..|..
T Consensus 426 ~g~~~~~~~N~yp~~~~~a~~~~~~~~~-~--~~r~~~lsRsg~aG~Q---~~~~~--WsGD~~s~wd~ 486 (772)
T COG1501 426 NGIDHEEMHNLYPLLYAKAVYEALKELG-G--NERPFILSRSGYAGSQ---RYAAH--WSGDNRSSWDS 486 (772)
T ss_pred cccCHHHHhcchhHHHHHHHHHHHHhhc-C--CCceEEEEecccccce---eccce--eCCccccchHH
Confidence 22221 23556666666531 1 2467888777654211 22222 25666666643
No 34
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.
Probab=98.06 E-value=1.7e-05 Score=87.01 Aligned_cols=136 Identities=15% Similarity=0.165 Sum_probs=94.0
Q ss_pred cCcccccccccchhhhhhccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCccccccccccccccc-cCC
Q 046494 190 IPRHLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIK-ENC 268 (724)
Q Consensus 190 ~P~~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~-~n~ 268 (724)
+|.+.=++=+|.|.. -|++.|++.++.+++.|||+..+.||+.|+...++ |. ..+
T Consensus 6 pP~walG~~~sr~~y----~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~~~--------------------f~~d~~ 61 (339)
T cd06603 6 PPLFSLGYHQCRWNY----KDQEDVKEVDAGFDEHDIPYDVIWLDIEHTDGKRY--------------------FTWDKK 61 (339)
T ss_pred CchHHHHHHhcCCCC----CCHHHHHHHHHHHHHcCCCceEEEEChHHhCCCCc--------------------eEeCcc
Confidence 566666666776642 47899999999999999999999999999854332 33 347
Q ss_pred CCCCCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccccCCCCCC--chhhhh----hhhccccc--------cCC-cc
Q 046494 269 KFNSSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLPS--SDIMKK----DIAMDSLE--------KYG-VG 333 (724)
Q Consensus 269 KFP~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~--s~~~~~----d~~~~~~~--------~~G-~g 333 (724)
||| ..+.+|+++|+ .|+| +-+|..+. |.++ ++.++. ++.++... -.| .+
T Consensus 62 ~FP---------dp~~mi~~L~~-~G~k-~~~~~~P~-----v~~~~~~~~y~e~~~~g~~vk~~~g~~~~~~~w~g~~~ 125 (339)
T cd06603 62 KFP---------DPEKMQEKLAS-KGRK-LVTIVDPH-----IKRDDGYYVYKEAKDKGYLVKNSDGGDFEGWCWPGSSS 125 (339)
T ss_pred cCC---------CHHHHHHHHHH-CCCE-EEEEecCc-----eecCCCCHHHHHHHHCCeEEECCCCCEEEEEECCCCcC
Confidence 999 77999999999 6999 77888753 3332 222222 22222111 122 12
Q ss_pred ccC--hhHHHHHHHHHHHHHh---hcCCCEEEEcccc
Q 046494 334 IID--PQKIFDFYNDLHSYLA---NSGVDGVKVDVQS 365 (724)
Q Consensus 334 ~v~--p~da~~fy~~~~~~La---s~GVD~VKvD~q~ 365 (724)
++| .++|.++|.+.++.+. +.|+|+++.|++.
T Consensus 126 ~~Dftnp~a~~ww~~~~~~~~~~~~~g~~g~w~D~~E 162 (339)
T cd06603 126 WPDFLNPEVRDWWASLFSYDKYKGSTENLYIWNDMNE 162 (339)
T ss_pred CccCCChhHHHHHHHHHHHHhhcccCCCceEEeccCC
Confidence 333 3568888888877765 4799999999864
No 35
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]
Probab=96.91 E-value=0.023 Score=67.87 Aligned_cols=161 Identities=19% Similarity=0.382 Sum_probs=107.3
Q ss_pred EEEEecCChhHHHHHHHHHHHHhcCcCCCccccccCcccccccccchhhhhhccCHHHHHHHHHHHHHCCCCCcEEEEec
Q 046494 156 VFINSGDNPFELIKDSIKILEKHKGTFSHLENKKIPRHLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPRFLVIDD 235 (724)
Q Consensus 156 v~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~~viIDD 235 (724)
+++=.|..|-.++++..+.+-+ .-..|-|-=++--|-|. -.+.+.+++-++.+.+.|||.+-+.+|+
T Consensus 268 ~y~flGptPe~vvqQy~q~iG~---------P~m~pYWslGf~~~Rwg----Y~nls~~~dvv~~~~~agiPld~~~~Di 334 (805)
T KOG1065|consen 268 FYVFLGPTPEGVVQQYLQLIGR---------PAMPPYWSLGFQLCRWG----YKNLSVVRDVVENYRAAGIPLDVIVIDI 334 (805)
T ss_pred EEEecCCChHHHHHHHHHHhCC---------ccCCchhhccceecccc----cccHHHHHHHHHHHHHcCCCcceeeeeh
Confidence 5555677888888888876431 11244555555556553 4678899999999999999999999999
Q ss_pred CcCcCccCCCCCCCCccccccccccccccccC-CCCCCCCCCCCCCcHHHHHHHHHHHcCCceEEeeeccccccCCCCCC
Q 046494 236 GWQETINEFCKDGEPLIEGTQFAIRLVDIKEN-CKFNSSGSDNSCNDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLPS 314 (724)
Q Consensus 236 GWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n-~KFP~~~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~ 314 (724)
-|++..+| |.-| .+|| +|+.+++.||+ .|+|+| +|..++ |+-+
T Consensus 335 DyMd~ykD--------------------FTvd~~~fp---------~~~~fv~~Lh~-~G~kyv-liidP~-----is~~ 378 (805)
T KOG1065|consen 335 DYMDGYKD--------------------FTVDKVWFP---------DLKDFVDDLHA-RGFKYV-LIIDPF-----ISTN 378 (805)
T ss_pred hhhhcccc--------------------eeeccccCc---------chHHHHHHHHh-CCCeEE-EEeCCc-----cccC
Confidence 99987665 5534 7899 59999999999 799966 666542 3333
Q ss_pred ch------hhhhhhhccc-------cc--cCC-cc---ccChhHHHHHHHHHHHHHh-hcCCCEEEEccccc
Q 046494 315 SD------IMKKDIAMDS-------LE--KYG-VG---IIDPQKIFDFYNDLHSYLA-NSGVDGVKVDVQSL 366 (724)
Q Consensus 315 s~------~~~~d~~~~~-------~~--~~G-~g---~v~p~da~~fy~~~~~~La-s~GVD~VKvD~q~~ 366 (724)
+. +++++..+.. +. ..| .. ..+| .+..+|.+-.+.|. +-++|+++.|+...
T Consensus 379 ~~y~~y~~g~~~~v~I~~~~g~~~~lg~vwP~~~~fpDftnp-~~~~Ww~~~~~~fh~~vp~dg~wiDmnE~ 449 (805)
T KOG1065|consen 379 SSYGPYDRGVAKDVLIKNREGSPKMLGEVWPGSTAFPDFTNP-AVVEWWLDELKRFHDEVPFDGFWIDMNEP 449 (805)
T ss_pred ccchhhhhhhhhceeeecccCchhhhcccCCCcccccccCCc-hHHHHHHHHHHhhcccCCccceEEECCCc
Confidence 32 3333222211 00 112 11 2355 56667766666564 57999999999654
No 36
>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain. The domain architecture of CPE1046 and its orthologs includes a C-terminal fibronectin type 3 (FN3) domain and a coagulation factor 5/8 type C domain in addition to the GH31 domain. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=90.54 E-value=2.6 Score=44.77 Aligned_cols=160 Identities=17% Similarity=0.232 Sum_probs=98.9
Q ss_pred CHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcHHHHHHHH
Q 046494 210 NPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKENCKFNSSGSDNSCNDLHEFIDEI 289 (724)
Q Consensus 210 te~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n~KFP~~~~~~~~~GLk~lv~~I 289 (724)
+...+.+.++..++..+|..|+|-+||.+..- ..|+.+++++
T Consensus 43 ~~~~a~~~~~~y~~~~~plgw~lpndgyg~~y--------------------------------------~~l~~~~~~~ 84 (261)
T cd06596 43 TTDDARKVADKYKENDMPLGWMLPNDGYGCGY--------------------------------------ENLKEVVDYL 84 (261)
T ss_pred chhhHHHHHHHHHhcCCCceeeccCCCCcchH--------------------------------------HHHHHHHHHH
Confidence 34567888999999999999999999887532 2689999999
Q ss_pred HHHcCCceEEeeeccccccCCCCCCchhhhhhhhccccccCCccccChhHHHHHHHHHHHHHhhcCCCEEEEccccchhh
Q 046494 290 KEKYGLKYVYMWHALAGYWGGVLPSSDIMKKDIAMDSLEKYGVGIIDPQKIFDFYNDLHSYLANSGVDGVKVDVQSLMET 369 (724)
Q Consensus 290 k~~~Glk~vgvWhal~GYWgGi~P~s~~~~~d~~~~~~~~~G~g~v~p~da~~fy~~~~~~Las~GVD~VKvD~q~~l~~ 369 (724)
++ .|++ .|+|.. + . + +++.+-....|+.+.|+|+...
T Consensus 85 ~~-~g~~-~glwt~-----------~-~----------------l----------~~~~~ev~~~g~~~~k~Dv~w~--- 121 (261)
T cd06596 85 HA-NGVE-TGLWTQ-----------S-G----------------L----------RDIAKEVGAAGVRARKTDVAWV--- 121 (261)
T ss_pred HH-cCCc-cccccc-----------c-c----------------h----------hhhhhhhccCCceEEeccchhh---
Confidence 98 7998 888833 1 1 0 2222334668999999999874
Q ss_pred ccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeeccCCCcccccccccceEeecCCCCCCCcchhhHHHHHHHHhhhhc
Q 046494 370 LGSGYGGRVLLTRQYQQALEQSVAWNFKDNNLICCMSHNSYSLYSSMKSAVARASEDFMPGEPTFQTLHIASVAFNSLLL 449 (724)
Q Consensus 370 l~~~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cMs~~~~~~~~~~~~~~~R~SdDf~p~~p~~~~~hi~~~a~nsl~~ 449 (724)
+.++.=.....++.++++++. -..|++|.+.|.+.-. .+++. -=|.|....|..+ +.+|....-.+ +.
T Consensus 122 -g~gy~~~l~~~ka~yeg~~~~----~~~RpfiltRsg~aGs---QRy~~--~WsGD~~stWe~L-r~sI~~~L~~g-Ls 189 (261)
T cd06596 122 -GAGYSFALNGVKAAADGIESN----SNARPFIVTVDGWAGT---QRYAG--IWTGDQSGSWEYI-RFHIPTYIGSG-LS 189 (261)
T ss_pred -ccchhHHHHHHHHHHHHHHhC----CCCCCEEEEecCcccc---CCCCC--ccCCCCcCcHHHH-HHHHHHHHHHH-hc
Confidence 223322234455666666542 2357788777765321 12332 2466777777553 34444333222 33
Q ss_pred cC-CCCCCcccccc
Q 046494 450 GE-IVVPDWDMFQS 462 (724)
Q Consensus 450 g~-~~~pDwDMf~s 462 (724)
|. +.-+|.+=|.-
T Consensus 190 G~p~~G~DIGGF~g 203 (261)
T cd06596 190 GQPNTTSDVDGIFG 203 (261)
T ss_pred CCCcCccccCcCCC
Confidence 43 35566665543
No 37
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=90.00 E-value=8.6 Score=42.20 Aligned_cols=126 Identities=17% Similarity=0.257 Sum_probs=80.9
Q ss_pred CHHHHHHHHHHHHHCCCCCcEEEEec----CcCcCccCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcHHHH
Q 046494 210 NPQGIKEGLHSFLEGGCSPRFLVIDD----GWQETINEFCKDGEPLIEGTQFAIRLVDIKENCKFNSSGSDNSCNDLHEF 285 (724)
Q Consensus 210 te~~I~~~l~~l~~~Gi~~~~viIDD----GWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n~KFP~~~~~~~~~GLk~l 285 (724)
+++.+.+.++.+++.++. .|+||= |.-.-..+ .. -.....+..++. ..++.+
T Consensus 11 ~~~~~~~~~~~i~~t~lN--avVIDvKdd~G~i~y~s~-------------~~-~~~~~ga~~~~i--------~D~~~l 66 (316)
T PF13200_consen 11 SPERLDKLLDLIKRTELN--AVVIDVKDDDGNITYDSQ-------------VP-LAREIGAVKPYI--------KDLKAL 66 (316)
T ss_pred CHHHHHHHHHHHHhcCCc--eEEEEEecCCceEEecCC-------------Cc-hhhhcccccccc--------cCHHHH
Confidence 567888999999999999 999972 22111110 00 000112223332 589999
Q ss_pred HHHHHHHcCCceEEeeeccccccCCCCCCchhhh--hhhhcccc------ccCCccccCh--hHHHHHHHHHHHHHhhcC
Q 046494 286 IDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMK--KDIAMDSL------EKYGVGIIDP--QKIFDFYNDLHSYLANSG 355 (724)
Q Consensus 286 v~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~--~d~~~~~~------~~~G~g~v~p--~da~~fy~~~~~~Las~G 355 (724)
++.+|+ +||. +=-|...+ -+....+ .||+++.- ...|...++| +++.+|--++...+++.|
T Consensus 67 ~~~l~e-~gIY-~IARIv~F-------kD~~la~~~pe~av~~~~G~~w~d~~~~~WvnP~~~evw~Y~i~IA~Eaa~~G 137 (316)
T PF13200_consen 67 VKKLKE-HGIY-PIARIVVF-------KDPVLAEAHPEWAVKTKDGSVWRDNEGEAWVNPYSKEVWDYNIDIAKEAAKLG 137 (316)
T ss_pred HHHHHH-CCCE-EEEEEEEe-------cChHHhhhChhhEEECCCCCcccCCCCCccCCCCCHHHHHHHHHHHHHHHHcC
Confidence 999999 7987 44565543 2221222 26666321 1234556776 678888889999999999
Q ss_pred CCEEEEccccchh
Q 046494 356 VDGVKVDVQSLME 368 (724)
Q Consensus 356 VD~VKvD~q~~l~ 368 (724)
||-|-.|-..+-+
T Consensus 138 FdEIqfDYIRFP~ 150 (316)
T PF13200_consen 138 FDEIQFDYIRFPD 150 (316)
T ss_pred CCEEEeeeeecCC
Confidence 9999999987654
No 38
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=80.77 E-value=39 Score=40.47 Aligned_cols=131 Identities=15% Similarity=0.205 Sum_probs=69.2
Q ss_pred ccCHHHHHHHH-HHHHHCCCCCcEEEE-ecCcCcCccCCCCCCCCccccccccccccc-cccCCCCCCCCCCCCCCcHHH
Q 046494 208 QVNPQGIKEGL-HSFLEGGCSPRFLVI-DDGWQETINEFCKDGEPLIEGTQFAIRLVD-IKENCKFNSSGSDNSCNDLHE 284 (724)
Q Consensus 208 ~vte~~I~~~l-~~l~~~Gi~~~~viI-DDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~-~~~n~KFP~~~~~~~~~GLk~ 284 (724)
.-|-.+|.+.+ +.|+++|+. .|.| --..+...+.- |++. .+ +..+.+|-. +..||.
T Consensus 152 ~g~~~~i~~~l~dyl~~LGvt--~i~L~Pi~e~~~~~~w---------GY~~----~~y~~~~~~~Gt------~~dlk~ 210 (613)
T TIGR01515 152 GLSYRELADQLIPYVKELGFT--HIELLPVAEHPFDGSW---------GYQV----TGYYAPTSRFGT------PDDFMY 210 (613)
T ss_pred CCCHHHHHHHHHHHHHHcCCC--EEEECCcccCCCCCCC---------CCCc----ccCcccccccCC------HHHHHH
Confidence 35678888885 999999998 4444 11111100000 0110 11 223456652 368999
Q ss_pred HHHHHHHHcCCceEEeeeccccccCCCCCCchhhhh-----hhhccc---cccCCccc--c--ChhHHHHHHHHHHHHHh
Q 046494 285 FIDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKK-----DIAMDS---LEKYGVGI--I--DPQKIFDFYNDLHSYLA 352 (724)
Q Consensus 285 lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~-----d~~~~~---~~~~G~g~--v--~p~da~~fy~~~~~~La 352 (724)
+|+.+|+ .||+ |-+...+.-. | ++...+.. .+.... ......+. . ..+.+++|.-+..+++.
T Consensus 211 lV~~~H~-~Gi~-VilD~V~NH~--~--~~~~~~~~~~~~~~y~~~~~~~~~~~~w~~~~~~~~~~~Vr~~l~~~~~~W~ 284 (613)
T TIGR01515 211 FVDACHQ-AGIG-VILDWVPGHF--P--KDDHGLAEFDGTPLYEHKDPRDGEHWDWGTLIFDYGRPEVRNFLVANALYWA 284 (613)
T ss_pred HHHHHHH-CCCE-EEEEecccCc--C--CccchhhccCCCcceeccCCccCcCCCCCCceecCCCHHHHHHHHHHHHHHH
Confidence 9999999 7999 6666544311 1 11101000 000000 00001111 1 23568888877777765
Q ss_pred -hcCCCEEEEcccc
Q 046494 353 -NSGVDGVKVDVQS 365 (724)
Q Consensus 353 -s~GVD~VKvD~q~ 365 (724)
+.||||+.+|+..
T Consensus 285 ~ey~iDG~R~D~v~ 298 (613)
T TIGR01515 285 EFYHIDGLRVDAVA 298 (613)
T ss_pred HHhCCcEEEEcCHH
Confidence 6899999999853
No 39
>cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus.
Probab=78.59 E-value=16 Score=39.85 Aligned_cols=96 Identities=19% Similarity=0.282 Sum_probs=61.4
Q ss_pred CcHHHHHHHHHHHcCCceEEeeeccccccCCCCCCchhhhhhhhccccccCCccccChhHHHHHHHHHHHHHhhcCCCEE
Q 046494 280 NDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKKDIAMDSLEKYGVGIIDPQKIFDFYNDLHSYLANSGVDGV 359 (724)
Q Consensus 280 ~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~d~~~~~~~~~G~g~v~p~da~~fy~~~~~~Las~GVD~V 359 (724)
..++.-++.+|+ .|+| |+.++.| |.| + ..+-+++....|.+.+.+++.++|+|+|
T Consensus 60 ~~~~~~i~~~q~-~G~K---VllSiGG-~~~----~----------------~~~~~~~~~~~fa~sl~~~~~~~g~DGi 114 (312)
T cd02871 60 AEFKADIKALQA-KGKK---VLISIGG-ANG----H----------------VDLNHTAQEDNFVDSIVAIIKEYGFDGL 114 (312)
T ss_pred HHHHHHHHHHHH-CCCE---EEEEEeC-CCC----c----------------cccCCHHHHHHHHHHHHHHHHHhCCCeE
Confidence 467788888888 5888 4456543 222 1 0123457788999999999999999999
Q ss_pred EEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeeccC
Q 046494 360 KVDVQSLMETLGSGYGGRVLLTRQYQQALEQSVAWNFKDNNLICCMSH 407 (724)
Q Consensus 360 KvD~q~~l~~l~~~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cMs~ 407 (724)
=+|+.... ...+..+....|..+|++ ++++++. +.+-+++.
T Consensus 115 DiD~E~~~-----~~~~~~~~~~~~~~~lk~-lr~~~~~-~~~lT~AP 155 (312)
T cd02871 115 DIDLESGS-----NPLNATPVITNLISALKQ-LKDHYGP-NFILTMAP 155 (312)
T ss_pred EEecccCC-----ccCCcHHHHHHHHHHHHH-HHHHcCC-CeEEEECC
Confidence 99987631 111112334455556554 5666643 57777764
No 40
>cd02879 GH18_plant_chitinase_class_V The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes. The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity.
Probab=69.52 E-value=27 Score=37.73 Aligned_cols=66 Identities=23% Similarity=0.328 Sum_probs=44.9
Q ss_pred cHHHHHHHHHHHcC-CceEEeeeccccccCCCCCCchhhhhhhhccccccCCccccChhHHHHHHHHHHHHHhhcCCCEE
Q 046494 281 DLHEFIDEIKEKYG-LKYVYMWHALAGYWGGVLPSSDIMKKDIAMDSLEKYGVGIIDPQKIFDFYNDLHSYLANSGVDGV 359 (724)
Q Consensus 281 GLk~lv~~Ik~~~G-lk~vgvWhal~GYWgGi~P~s~~~~~d~~~~~~~~~G~g~v~p~da~~fy~~~~~~Las~GVD~V 359 (724)
.+..+++.+|++.. +| +..++.| |+. ++..+.+ -+-+|+.-+.|-+.+.+++.+.|+|||
T Consensus 52 ~~~~~~~~~k~~~~~lk---vlisiGG-~~~---~s~~fs~------------~~~~~~~R~~fi~siv~~l~~~~fDGi 112 (299)
T cd02879 52 EFSTFTETVKRKNPSVK---TLLSIGG-GGS---DSSAFAA------------MASDPTARKAFINSSIKVARKYGFDGL 112 (299)
T ss_pred HHHHHHHHHHHhCCCCe---EEEEEeC-CCC---CCchhhH------------HhCCHHHHHHHHHHHHHHHHHhCCCce
Confidence 56777778887644 77 4566644 321 1112111 022567788999999999999999999
Q ss_pred EEcccc
Q 046494 360 KVDVQS 365 (724)
Q Consensus 360 KvD~q~ 365 (724)
-+|+.+
T Consensus 113 diDWE~ 118 (299)
T cd02879 113 DLDWEF 118 (299)
T ss_pred eecccC
Confidence 999876
No 41
>TIGR02456 treS_nterm trehalose synthase. Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530).
Probab=68.36 E-value=79 Score=37.21 Aligned_cols=30 Identities=23% Similarity=0.507 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHHHHhhcCCCEEEEccccch
Q 046494 338 QKIFDFYNDLHSYLANSGVDGVKVDVQSLM 367 (724)
Q Consensus 338 ~da~~fy~~~~~~Las~GVD~VKvD~q~~l 367 (724)
+.++++..+..+++.+.||||+-+|+...+
T Consensus 173 p~vr~~l~~~~~~w~~~GvDGfRlDav~~~ 202 (539)
T TIGR02456 173 PAVHDAVHDVMRFWLDLGVDGFRLDAVPYL 202 (539)
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecHHhh
Confidence 467788778888888899999999986543
No 42
>PF00724 Oxidored_FMN: NADH:flavin oxidoreductase / NADH oxidase family; InterPro: IPR001155 The TIM-barrel fold is a closed barrel structure composed of an eight-fold repeat of beta-alpha units, where the eight parallel beta strands on the inside are covered by the eight alpha helices on the outside []. It is a widely distributed fold which has been found in many enzyme families that catalyse completely unrelated reactions []. The active site is always found at the C-terminal end of this domain. Proteins in this entry are a variety of NADH:flavin oxidoreductase/NADH oxidase enzymes, found mostly in bacteria or fungi, that contain a TIM-barrel fold. They commonly use FMN/FAD as cofactor and include: dimethylamine dehydrogenase trimethylamine dehydrogenase 12-oxophytodienoate reductase NADPH dehydrogenase NADH oxidase ; GO: 0010181 FMN binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GKA_B 3P67_A 3F03_K 2ABA_A 1VYR_A 1GVO_A 3KFT_B 3P8I_A 1GVQ_A 3P74_A ....
Probab=67.09 E-value=99 Score=34.11 Aligned_cols=127 Identities=17% Similarity=0.279 Sum_probs=65.6
Q ss_pred cCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcHHHHHHH
Q 046494 209 VNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKENCKFNSSGSDNSCNDLHEFIDE 288 (724)
Q Consensus 209 vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n~KFP~~~~~~~~~GLk~lv~~ 288 (724)
++++...+.....+++|+- .+|+...-=+.... .+.+.+. +..++..| |+|.+++.
T Consensus 33 ~~~~~~~~yy~~rA~GG~G--lii~~~~~v~~~~~------------~~~~~~~-i~~d~~i~---------~~k~l~~~ 88 (341)
T PF00724_consen 33 VPTDRLIAYYERRAKGGAG--LIITEATAVSPEGR------------GFPGQPG-IWDDEQIP---------GLKKLADA 88 (341)
T ss_dssp BCHHHHHHHHHHHHHTTTS--EEEEEEEESSGGGS------------SSTTSEB-SSSHHHHH---------HHHHHHHH
T ss_pred CcHHHHHHHHHHHhhcCCc--eEEecccccccccc------------cccccch-hchhhHHH---------HHHHHHHH
Confidence 7778889999999999977 77775532111111 0111111 21122333 99999999
Q ss_pred HHHHcCCc-eEEeeeccccccCCCCCCchhhhhhhhcc-c--ccc----CCc--cccChhHHHHHHHHH---HHHHhhcC
Q 046494 289 IKEKYGLK-YVYMWHALAGYWGGVLPSSDIMKKDIAMD-S--LEK----YGV--GIIDPQKIFDFYNDL---HSYLANSG 355 (724)
Q Consensus 289 Ik~~~Glk-~vgvWhal~GYWgGi~P~s~~~~~d~~~~-~--~~~----~G~--g~v~p~da~~fy~~~---~~~Las~G 355 (724)
||+ +|-| .+=+||+ |.+.. |...... .+.-. . ... .|. --+..+++++.-++| .+...++|
T Consensus 89 vh~-~Ga~i~~QL~H~--G~~~~--~~~~~~~-~~~psa~~~~~~~~~~~~~~~~~mt~~eI~~ii~~f~~AA~~A~~AG 162 (341)
T PF00724_consen 89 VHA-HGAKIIAQLWHA--GRQAN--PEYSGDP-PVGPSAPSALPSPIKFMGYPPREMTEEEIEEIIEDFAQAARRAKEAG 162 (341)
T ss_dssp HHH-TTSEEEEEEE----GGGSS--GCCSGGG-CEESSCSSSSSTTTTETSCEEEE--HHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHh-cCccceeecccc--ccccC--cccCCCC-ccCcccccccCcccccCCCCCeeCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 999 7965 3346886 44322 1100000 00000 0 000 010 112456677766666 44567899
Q ss_pred CCEEEEcccc
Q 046494 356 VDGVKVDVQS 365 (724)
Q Consensus 356 VD~VKvD~q~ 365 (724)
+|+|.+-+.+
T Consensus 163 fDGVEIH~ah 172 (341)
T PF00724_consen 163 FDGVEIHAAH 172 (341)
T ss_dssp -SEEEEEEST
T ss_pred cCeEeecccc
Confidence 9999998865
No 43
>cd06548 GH18_chitinase The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel.
Probab=60.92 E-value=73 Score=34.68 Aligned_cols=31 Identities=16% Similarity=0.329 Sum_probs=27.4
Q ss_pred ChhHHHHHHHHHHHHHhhcCCCEEEEccccc
Q 046494 336 DPQKIFDFYNDLHSYLANSGVDGVKVDVQSL 366 (724)
Q Consensus 336 ~p~da~~fy~~~~~~Las~GVD~VKvD~q~~ 366 (724)
+++.-+.|-+.+.+++.+.|+|||=+|+.+.
T Consensus 106 ~~~~r~~Fi~siv~~l~~~~fDGidiDwE~p 136 (322)
T cd06548 106 TEASRAKFADSAVDFIRKYGFDGIDIDWEYP 136 (322)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCeEEECCcCC
Confidence 5667788999999999999999999998763
No 44
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=60.45 E-value=1.2e+02 Score=33.30 Aligned_cols=132 Identities=20% Similarity=0.291 Sum_probs=71.8
Q ss_pred CHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCccccccccccccccccCCCCCCCCCCC--CCCcHHHHHH
Q 046494 210 NPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKENCKFNSSGSDN--SCNDLHEFID 287 (724)
Q Consensus 210 te~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n~KFP~~~~~~--~~~GLk~lv~ 287 (724)
+++++.+.++.|++.|+. .|+++=-+. ++.-.+ . ++.+-.++..+.+.. +-.=|+.+|+
T Consensus 17 ~~~~~~~~l~~l~~~~~N--~V~~qVr~~---gda~Y~-----------S---~~~p~s~~~~g~~~~~pg~DpL~~~I~ 77 (311)
T PF02638_consen 17 SKEQIDEMLDDLKSAGFN--AVFVQVRPR---GDALYP-----------S---DIEPWSGYLTGKQGKDPGFDPLEFMIE 77 (311)
T ss_pred CHHHHHHHHHHHHHcCCC--EEEEEEEeC---cEEEec-----------c---cccccccccCCCCCCCCCccHHHHHHH
Confidence 889999999999999987 666542221 110001 0 011111211111000 0124899999
Q ss_pred HHHHHcCCceEEeeeccccccCCCCCCchhhhh--hhhc-cc---c-c----cCCccccCh--hHHHHHHHHHHHHH-hh
Q 046494 288 EIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKK--DIAM-DS---L-E----KYGVGIIDP--QKIFDFYNDLHSYL-AN 353 (724)
Q Consensus 288 ~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~--d~~~-~~---~-~----~~G~g~v~p--~da~~fy~~~~~~L-as 353 (724)
+-|+ .||+ |--|+.+. .-. .+.+...++ .+.. +. . . .++..+++| +++++|.-++..-+ ..
T Consensus 78 eaHk-rGle-vHAW~~~~-~~~--~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lnP~~PeVr~~i~~~v~Eiv~~ 152 (311)
T PF02638_consen 78 EAHK-RGLE-VHAWFRVG-FNA--PDVSHILKKHPEWFAVNHPGWVRTYEDANGGYYWLNPGHPEVRDYIIDIVKEIVKN 152 (311)
T ss_pred HHHH-cCCE-EEEEEEee-cCC--CchhhhhhcCchhheecCCCceeecccCCCCceEECCCCHHHHHHHHHHHHHHHhc
Confidence 9998 6999 88887321 100 111111111 2211 10 0 0 123335666 57999988777765 57
Q ss_pred cCCCEEEEcccc
Q 046494 354 SGVDGVKVDVQS 365 (724)
Q Consensus 354 ~GVD~VKvD~q~ 365 (724)
..||||-.|-..
T Consensus 153 YdvDGIhlDdy~ 164 (311)
T PF02638_consen 153 YDVDGIHLDDYF 164 (311)
T ss_pred CCCCeEEecccc
Confidence 899999999543
No 45
>cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are inclu
Probab=59.90 E-value=77 Score=31.56 Aligned_cols=64 Identities=22% Similarity=0.286 Sum_probs=41.5
Q ss_pred ChhHHHHHHHHHHHHHhhcCCCEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeeccC
Q 046494 336 DPQKIFDFYNDLHSYLANSGVDGVKVDVQSLMETLGSGYGGRVLLTRQYQQALEQSVAWNFKDNNLICCMSH 407 (724)
Q Consensus 336 ~p~da~~fy~~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cMs~ 407 (724)
+++..++|.+.+.+++.+.|+|||-+|+.... .... .....|...+++ +++.|+..+.+-+++.
T Consensus 85 ~~~~~~~f~~~~~~~v~~~~~DGidiD~E~~~------~~~~-~~~~~~~~ll~~-lr~~l~~~~~~ls~a~ 148 (210)
T cd00598 85 DPASRAAFANSLVSFLKTYGFDGVDIDWEYPG------AADN-SDRENFITLLRE-LRSALGAANYLLTIAV 148 (210)
T ss_pred CHHHHHHHHHHHHHHHHHcCCCceEEeeeCCC------CcCc-cHHHHHHHHHHH-HHHHhcccCcEEEEEe
Confidence 56777889999999999999999999997631 1110 112334444444 5555654356666664
No 46
>cd02932 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN binding domain. YqjM is involved in the oxidative stress response of Bacillus subtilis. Like the other OYE members, each monomer of YqjM contains FMN as a non-covalently bound cofactor and uses NADPH as a reducing agent. The YqjM enzyme exists as a homotetramer that is assembled as a dimer of catalytically dependent dimers, while other OYE members exist only as monomers or dimers. Moreover, the protein displays a shared active site architecture where an arginine finger at the COOH terminus of one monomer extends into the active site of the adjacent monomer and is directly involved in substrate recognition. Another remarkable difference in the binding of the ligand in YqjM is represented by the contribution of the NH2-terminal tyrosine instead of a COOH-terminal tyrosine in OYE and its homologs.
Probab=54.22 E-value=94 Score=34.15 Aligned_cols=70 Identities=16% Similarity=0.120 Sum_probs=39.9
Q ss_pred ccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcHHHHHH
Q 046494 208 QVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKENCKFNSSGSDNSCNDLHEFID 287 (724)
Q Consensus 208 ~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n~KFP~~~~~~~~~GLk~lv~ 287 (724)
.+| +...+..+..+++|+. .+|+-...-+..... +.+.+. +..++..| +++.+++
T Consensus 30 ~~~-~~~~~~y~~rA~gg~g--lii~~~~~v~~~~~~------------~~~~~~-~~~d~~~~---------~~~~l~~ 84 (336)
T cd02932 30 VAT-DWHLVHYGSRALGGAG--LVIVEATAVSPEGRI------------TPGDLG-LWNDEQIE---------ALKRIVD 84 (336)
T ss_pred CCC-HHHHHHHHHHHcCCCc--EEEEcceEECCCcCC------------CCCcee-ecCHHHHH---------HHHHHHH
Confidence 356 4445667778888877 666655443222110 001111 11222334 9999999
Q ss_pred HHHHHcCCc-eEEeeec
Q 046494 288 EIKEKYGLK-YVYMWHA 303 (724)
Q Consensus 288 ~Ik~~~Glk-~vgvWha 303 (724)
.+|+ +|-+ .+=+||+
T Consensus 85 ~vh~-~G~~~~~QL~H~ 100 (336)
T cd02932 85 FIHS-QGAKIGIQLAHA 100 (336)
T ss_pred HHHh-cCCcEEEEccCC
Confidence 9999 7855 5667884
No 47
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins. The endo-beta-N-acetylglucosaminidases have a glycosyl hydrolase family 18 (GH18) catalytic domain. Some members also have an additional C-terminal glycosyl hydrolase family 20 (GH20) domain while others have an N-terminal domain of unknown function (pfam08522). Members of this family include endo-beta-N-acetylglucosaminidase S (EndoS) from Streptococcus pyogenes, EndoF1, EndoF2, EndoF3, and EndoH from Flavobacterium meningosepticum, and EndoE from Enterococcus faecalis. EndoS is a secreted endoglycosidase from Streptococcus pyogenes that specifically hydrolyzes the glycan on human IgG between two core N-acetylglucosamine residues. EndoE is a secreted endoglycosidase, encoded by the ndoE gene in Enterococcus faecalis, that hydrolyzes the glycan on human RNase B.
Probab=53.98 E-value=1e+02 Score=32.08 Aligned_cols=70 Identities=9% Similarity=0.094 Sum_probs=43.1
Q ss_pred ChhHHHHHHHHHHHHHhhcCCCEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeeccCCC
Q 046494 336 DPQKIFDFYNDLHSYLANSGVDGVKVDVQSLMETLGSGYGGRVLLTRQYQQALEQSVAWNFKDNNLICCMSHNS 409 (724)
Q Consensus 336 ~p~da~~fy~~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cMs~~~ 409 (724)
+++...+|.+.+..++..+|+|||=+|+...... ..+........|...+++ ++++++..+-+.+++..+
T Consensus 85 ~~~~~~~fa~~l~~~v~~yglDGiDiD~E~~~~~---~~~~~~~~~~~~~~lv~~-Lr~~~~~~~kllt~~~~~ 154 (255)
T cd06542 85 SDAAAKAYAKAIVDTVDKYGLDGVDFDDEYSGYG---KNGTSQPSNEAFVRLIKE-LRKYMGPTDKLLTIDGYG 154 (255)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCceEEeeeecccC---CCCCCcchHHHHHHHHHH-HHHHhCcCCcEEEEEecC
Confidence 4567889999999999999999999998653210 000011223345555554 566664334556666443
No 48
>cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase. One member of this subgroup, the Sinorhizobium meliloti stachydrine utilization protein stcD, has been idenified as a putative N-methylproline demethylase.
Probab=53.20 E-value=1.5e+02 Score=32.80 Aligned_cols=126 Identities=10% Similarity=0.099 Sum_probs=63.0
Q ss_pred ccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcHHHHHH
Q 046494 208 QVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKENCKFNSSGSDNSCNDLHEFID 287 (724)
Q Consensus 208 ~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n~KFP~~~~~~~~~GLk~lv~ 287 (724)
.+|++. ++--+..+++|+- .+|.....=+...... .+.+. +..++.. .+|+.+++
T Consensus 30 ~~t~~~-~~~y~~~A~gG~G--lIi~e~~~v~~~~~~~------------~~~~~-l~~d~~i---------~~~~~l~~ 84 (343)
T cd04734 30 LPSERY-IAYHEERARGGAG--LIITEGSSVHPSDSPA------------FGNLN-ASDDEII---------PGFRRLAE 84 (343)
T ss_pred CCCHHH-HHHHHHHHhCCCC--EEEEeeeeeCCcccCC------------CCccc-cCCHHHH---------HHHHHHHH
Confidence 356554 4666667888877 7777655533222110 01111 1111222 39999999
Q ss_pred HHHHHcCCc-eEEeeeccccccCCC-CCCchhh-hhhhhccc--cccCCccccChhHHHHHHHHHH---HHHhhcCCCEE
Q 046494 288 EIKEKYGLK-YVYMWHALAGYWGGV-LPSSDIM-KKDIAMDS--LEKYGVGIIDPQKIFDFYNDLH---SYLANSGVDGV 359 (724)
Q Consensus 288 ~Ik~~~Glk-~vgvWhal~GYWgGi-~P~s~~~-~~d~~~~~--~~~~G~g~v~p~da~~fy~~~~---~~Las~GVD~V 359 (724)
.+|+ +|-+ .+=+||+ |++..- .+..+.+ ..+..... .... -++.+++.+.-++|. ....++|+|+|
T Consensus 85 ~vh~-~g~~~~~Ql~H~--G~~~~~~~~~~~~~~ps~~~~~~~~~~~~---~mt~~eI~~ii~~f~~AA~ra~~aGfDgV 158 (343)
T cd04734 85 AVHA-HGAVIMIQLTHL--GRRGDGDGSWLPPLAPSAVPEPRHRAVPK---AMEEEDIEEIIAAFADAARRCQAGGLDGV 158 (343)
T ss_pred HHHh-cCCeEEEeccCC--CcCcCcccCCCcccCCCCCCCCCCCCCCC---cCCHHHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 9999 7844 4557775 554320 0000000 00110000 0001 123455666655553 34567999999
Q ss_pred EEccc
Q 046494 360 KVDVQ 364 (724)
Q Consensus 360 KvD~q 364 (724)
.+=..
T Consensus 159 eih~a 163 (343)
T cd04734 159 ELQAA 163 (343)
T ss_pred EEccc
Confidence 99873
No 49
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=53.07 E-value=85 Score=37.17 Aligned_cols=31 Identities=26% Similarity=0.514 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHHHHhhcCCCEEEEccccchh
Q 046494 338 QKIFDFYNDLHSYLANSGVDGVKVDVQSLME 368 (724)
Q Consensus 338 ~da~~fy~~~~~~Las~GVD~VKvD~q~~l~ 368 (724)
+.++++..+..+++.+.||||+-+|+-..+.
T Consensus 176 p~V~~~l~~~~~~W~~~GvDGfRlDa~~~i~ 206 (551)
T PRK10933 176 PAVRAELKKVCEFWADRGVDGLRLDVVNLIS 206 (551)
T ss_pred HHHHHHHHHHHHHHHHCCCcEEEEcchhhcC
Confidence 4688888888888889999999999876543
No 50
>cd06544 GH18_narbonin Narbonin is a plant 2S protein from the globulin fraction of narbon bean (Vicia narbonensis L.) cotyledons with unknown function. Narbonin has a glycosyl hydrolase family 18 (GH18) domain without the conserved catalytic residues and with no known enzymatic activity. Narbonin amounts to up to 3% of the total seed globulins of mature seeds and was thought to be a storage protein but was found to degrade too slowly during germination. This family also includes the VfNOD32 nodulin from Vicia faba.
Probab=52.07 E-value=67 Score=34.14 Aligned_cols=28 Identities=18% Similarity=0.367 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHhhcCCCEEEEccccc
Q 046494 339 KIFDFYNDLHSYLANSGVDGVKVDVQSL 366 (724)
Q Consensus 339 da~~fy~~~~~~Las~GVD~VKvD~q~~ 366 (724)
-++.|.+.+.+++..+|+|||-+|+.+.
T Consensus 97 ~~~~fv~S~~~~l~~~~fDGiDiDwE~~ 124 (253)
T cd06544 97 WVSNAVSSLTSIIQTYNLDGIDIDYEHF 124 (253)
T ss_pred HHHHHHHHHHHHHHHhCCCceeeecccC
Confidence 3467788999999999999999999863
No 51
>cd06543 GH18_PF-ChiA-like PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain. Members of this domain family are found not only in archaea but also in eukaryotes and prokaryotes. PF-ChiA exhibits hydrolytic activity toward both colloidal and crystalline (beta/alpha) chitins at high temperature.
Probab=48.90 E-value=1.5e+02 Score=32.27 Aligned_cols=94 Identities=13% Similarity=0.153 Sum_probs=57.7
Q ss_pred CcHHHHHHHHHHHcCCceEEeeeccccccCCCCCCchhhhhhhhccccccCCccccChhHHHHHHHHHHHHHhhcCCCEE
Q 046494 280 NDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKKDIAMDSLEKYGVGIIDPQKIFDFYNDLHSYLANSGVDGV 359 (724)
Q Consensus 280 ~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~d~~~~~~~~~G~g~v~p~da~~fy~~~~~~Las~GVD~V 359 (724)
..+..-+..+|+ .|+| |- .++.| |.|- +-+ ....++..|.+.+.+.+..+|+|+|
T Consensus 54 ~~~~~~i~~lk~-~G~k-Vi--iS~GG-~~g~-~~~-------------------~~~~~~~~~~~a~~~~i~~y~~dgi 108 (294)
T cd06543 54 GWIKSDIAALRA-AGGD-VI--VSFGG-ASGT-PLA-------------------TSCTSADQLAAAYQKVIDAYGLTHL 108 (294)
T ss_pred hhHHHHHHHHHH-cCCe-EE--EEecC-CCCC-ccc-------------------cCcccHHHHHHHHHHHHHHhCCCeE
Confidence 356667788898 5877 33 45433 3331 110 1235677899999999999999999
Q ss_pred EEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeecc
Q 046494 360 KVDVQSLMETLGSGYGGRVLLTRQYQQALEQSVAWNFKDNNLICCMS 406 (724)
Q Consensus 360 KvD~q~~l~~l~~~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cMs 406 (724)
-+|..+.. ...+ +....+.+||.. +++++++..+...+.
T Consensus 109 DfDiE~~~------~~d~-~~~~~~~~al~~-Lq~~~p~l~vs~Tlp 147 (294)
T cd06543 109 DFDIEGGA------LTDT-AAIDRRAQALAL-LQKEYPDLKISFTLP 147 (294)
T ss_pred EEeccCCc------cccc-hhHHHHHHHHHH-HHHHCCCcEEEEecC
Confidence 99987632 1111 223445666655 667777554444443
No 52
>cd02873 GH18_IDGF The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster. The IDGF's have an eight-stranded alpha/beta barrel fold and are related to the glycosyl hydrolase family 18 (GH18) chitinases, but they have an amino acid substitution known to abolish chitinase catalytic activity. IDGFs may have evolved from chitinases to gain new functions as growth factors, interacting with cell surface glycoproteins involved in growth-promoting processes.
Probab=47.50 E-value=93 Score=35.37 Aligned_cols=31 Identities=29% Similarity=0.362 Sum_probs=27.2
Q ss_pred ChhHHHHHHHHHHHHHhhcCCCEEEEccccc
Q 046494 336 DPQKIFDFYNDLHSYLANSGVDGVKVDVQSL 366 (724)
Q Consensus 336 ~p~da~~fy~~~~~~Las~GVD~VKvD~q~~ 366 (724)
+++.-+.|-+...++|.++|+|||-+|+.+.
T Consensus 102 ~~~~R~~Fi~siv~~l~~~~fDGidiDWEyP 132 (413)
T cd02873 102 SSESRNAFINSAHSLLKTYGFDGLDLAWQFP 132 (413)
T ss_pred CHHHHHHHHHHHHHHHHHcCCCCeEeeeeCC
Confidence 5666778999999999999999999999763
No 53
>cd02872 GH18_chitolectin_chitotriosidase This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases. The conserved domain is an eight-stranded alpha/beta barrel fold belonging to the family 18 glycosyl hydrolases. The fold has a pronounced active-site cleft at the C-terminal end of the beta-barrel. The chitolectins lack a key active site glutamate (the proton donor required for hydrolytic activity) but retain highly conserved residues involved in oligosaccharide binding. Chitotriosidase is a chitinolytic enzyme expressed in maturing macrophages, which suggests that it plays a part in antimicrobial defense. Chitotriosidase hydrolyzes chitotriose, as well as colloidal chitin to yield chitobiose and is therefore considered an exochitinase. Chitotriosidase occurs in two major forms, the la
Probab=47.33 E-value=91 Score=34.35 Aligned_cols=31 Identities=23% Similarity=0.424 Sum_probs=26.9
Q ss_pred ChhHHHHHHHHHHHHHhhcCCCEEEEccccc
Q 046494 336 DPQKIFDFYNDLHSYLANSGVDGVKVDVQSL 366 (724)
Q Consensus 336 ~p~da~~fy~~~~~~Las~GVD~VKvD~q~~ 366 (724)
++.....|-+.+.+++.+.|+|||-+|+...
T Consensus 93 ~~~~r~~fi~~iv~~l~~~~~DGidiDwE~p 123 (362)
T cd02872 93 SPENRKTFIKSAIAFLRKYGFDGLDLDWEYP 123 (362)
T ss_pred CHHHHHHHHHHHHHHHHHcCCCCeeeeeecc
Confidence 4666778999999999999999999998763
No 54
>PRK14835 undecaprenyl pyrophosphate synthase; Provisional
Probab=47.23 E-value=1.4e+02 Score=32.29 Aligned_cols=84 Identities=17% Similarity=0.261 Sum_probs=43.7
Q ss_pred CCCChhhHHHHHHHHHHHHHHhhCCCCceEeeccC--CCccccc---ccccceEeecCCCCCCCcchhhHHHHHHHHhhh
Q 046494 373 GYGGRVLLTRQYQQALEQSVAWNFKDNNLICCMSH--NSYSLYS---SMKSAVARASEDFMPGEPTFQTLHIASVAFNSL 447 (724)
Q Consensus 373 ~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cMs~--~~~~~~~---~~~~~~~R~SdDf~p~~p~~~~~hi~~~a~nsl 447 (724)
+++++-++++|.++.++...........|..+... ....++. ..+-.++|+|+.---+ -..+++++|.-+
T Consensus 170 ~Yggr~EI~~A~k~i~~~~~~g~~~~~~i~~~~~e~~i~~~L~~~~~p~pDLLIRTsGE~RLS-----nFLLWQsayaEl 244 (275)
T PRK14835 170 GYGGREEIVDAVKSLLLEAAATGKSPEEVAAELTPEHISAHLYTAGVPDPDFIIRTSGEIRLS-----GFLLWQSAYSEY 244 (275)
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCCChHHhcccCCHHHHHHHhccCCCCCCCEEEecCCCcccc-----CCHHHhhhheEE
Confidence 67888888888887776542221111111111000 0011111 1234557888742211 123477788888
Q ss_pred hccCCCCCCccccc
Q 046494 448 LLGEIVVPDWDMFQ 461 (724)
Q Consensus 448 ~~g~~~~pDwDMf~ 461 (724)
+.-...|||.+.+.
T Consensus 245 yF~d~lWPdF~~~d 258 (275)
T PRK14835 245 YFCDVYWPGFRKVD 258 (275)
T ss_pred EeCCCCCCcCCHHH
Confidence 77777899977554
No 55
>PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A.
Probab=46.85 E-value=1.8e+02 Score=34.62 Aligned_cols=185 Identities=18% Similarity=0.245 Sum_probs=87.1
Q ss_pred hhhccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcHHH
Q 046494 205 FYKQVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKENCKFNSSGSDNSCNDLHE 284 (724)
Q Consensus 205 f~~~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n~KFP~~~~~~~~~GLk~ 284 (724)
|..+.+++...+.++.|...-|. .++-=| ||-.-..+- .....++...|.+|--..-.. .=+|.
T Consensus 111 f~~~~~~~~~~~~i~~L~~yHIN--~~QFYD-W~~rH~~Pl-----~~~~~~~~~~w~D~~~r~i~~--------~~Vk~ 174 (559)
T PF13199_consen 111 FDKSKSAEDIEAEIDQLNRYHIN--GLQFYD-WMYRHHKPL-----PGTNGQPDQTWTDWANRQIST--------STVKD 174 (559)
T ss_dssp -GGGGGHHHHHHHHHHHHHTT----EEEETS---SBTTB-S------SSS-EEE-TT-TTT--EEEH--------HHHHH
T ss_pred CCCcCCchhHHHHHHHHHhhCcC--eEEEEe-eccccCCcC-----CCCCCchhhhhhhhcCCEehH--------HHHHH
Confidence 55557889999999999996665 666644 554322211 011134444555544211122 46899
Q ss_pred HHHHHHHHcCCceEEeeecccccc-----CCCCCCchhhhhhh--hcccccc-CC----ccccChh--HHHHHH-HHHHH
Q 046494 285 FIDEIKEKYGLKYVYMWHALAGYW-----GGVLPSSDIMKKDI--AMDSLEK-YG----VGIIDPQ--KIFDFY-NDLHS 349 (724)
Q Consensus 285 lv~~Ik~~~Glk~vgvWhal~GYW-----gGi~P~s~~~~~d~--~~~~~~~-~G----~g~v~p~--da~~fy-~~~~~ 349 (724)
.|+.+|+ +|+| ...+-.+.|-= -|++|.-..++.+- ..+.+.. .+ +.++||. .-|.|+ +.+-.
T Consensus 175 yI~~ah~-~Gmk-am~Ynmiyaa~~~~~~~gv~~eW~ly~d~~~~~~~~~~l~~~w~s~lyl~dP~N~~WQ~yI~~q~~~ 252 (559)
T PF13199_consen 175 YINAAHK-YGMK-AMAYNMIYAANNNYEEDGVSPEWGLYKDDSHSNQDTYDLPDGWPSDLYLMDPGNPEWQNYIINQMNK 252 (559)
T ss_dssp HHHHHHH-TT-E-EEEEEESSEEETT--S--SS-GGBEEESSSBTSB-EEEETT-E--EEEEB-TT-HHHHHHHHHHHHH
T ss_pred HHHHHHH-cCcc-eehhHhhhccccCcccccCCchhhhhhccCCCccceeecCcccccceEEecCCCHHHHHHHHHHHHH
Confidence 9999999 8998 44444433221 24444311111100 0011111 11 4566763 455554 35556
Q ss_pred HHhhcCCCEEEEccccchhhccCCCCChh-hHHHHHHHHHHHHHHhhCCCCce-EeeccCC
Q 046494 350 YLANSGVDGVKVDVQSLMETLGSGYGGRV-LLTRQYQQALEQSVAWNFKDNNL-ICCMSHN 408 (724)
Q Consensus 350 ~Las~GVD~VKvD~q~~l~~l~~~~~g~~-~l~~ay~~Al~~s~~~~f~~~~i-I~cMs~~ 408 (724)
.+..-||||+-+|--..........+..+ .+...|..=|.+ +.+..++..+ ++-.+.+
T Consensus 253 ~~~~~gFDG~hlDq~G~~~~~~d~~G~~i~~l~~~y~~Fi~~-~K~~~~~k~lv~N~V~~~ 312 (559)
T PF13199_consen 253 AIQNFGFDGWHLDQLGNRGTVYDYDGNKIYDLSDGYASFINA-MKEALPDKYLVFNAVSGY 312 (559)
T ss_dssp HHHHHT--EEEEE-S--EEEEGGTT---GGECHHHHHHHHHH-HHHHSTTSEEEEB-GGGT
T ss_pred HHHccCCceEeeeccCCCCccccCCCCCchhhHHHHHHHHHH-HHHhCCCCceeeeccCcc
Confidence 66778999999998764433332334456 667777766666 4555666654 3444443
No 56
>PRK10785 maltodextrin glucosidase; Provisional
Probab=46.22 E-value=3.1e+02 Score=32.80 Aligned_cols=64 Identities=14% Similarity=0.187 Sum_probs=37.8
Q ss_pred CHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCccccccccccccccc-cCCCCCCCCCCCCCCcHHHHHHH
Q 046494 210 NPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIK-ENCKFNSSGSDNSCNDLHEFIDE 288 (724)
Q Consensus 210 te~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~-~n~KFP~~~~~~~~~GLk~lv~~ 288 (724)
+=++|.+.|+.|+++|+. .|-|===.++..+. ...-.++. -+..|-. ...|+.+|++
T Consensus 177 Dl~GI~~kLdYL~~LGv~--~I~L~Pif~s~s~h--------------gYd~~Dy~~iDp~~Gt------~~df~~Lv~~ 234 (598)
T PRK10785 177 DLDGISEKLPYLKKLGVT--ALYLNPIFTAPSVH--------------KYDTEDYRHVDPQLGG------DAALLRLRHA 234 (598)
T ss_pred CHHHHHHHHHHHHHcCCC--EEEeCCcccCCCCC--------------CcCcccccccCcccCC------HHHHHHHHHH
Confidence 568999999999999998 33220001111110 00111222 2344542 2589999999
Q ss_pred HHHHcCCc
Q 046494 289 IKEKYGLK 296 (724)
Q Consensus 289 Ik~~~Glk 296 (724)
+|+ .|||
T Consensus 235 aH~-rGik 241 (598)
T PRK10785 235 TQQ-RGMR 241 (598)
T ss_pred HHH-CCCE
Confidence 999 6999
No 57
>cd02874 GH18_CFLE_spore_hydrolase Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
Probab=44.89 E-value=1.2e+02 Score=32.78 Aligned_cols=66 Identities=18% Similarity=0.299 Sum_probs=42.3
Q ss_pred HHHHHHHHHHcCCceEEeeeccccccCCCCCCchhhhhhhhccccccCCccccChhHHHHHHHHHHHHHhhcCCCEEEEc
Q 046494 283 HEFIDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKKDIAMDSLEKYGVGIIDPQKIFDFYNDLHSYLANSGVDGVKVD 362 (724)
Q Consensus 283 k~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~d~~~~~~~~~G~g~v~p~da~~fy~~~~~~Las~GVD~VKvD 362 (724)
..+++..|+ .++| ++..+.| |.+-..++..+.+ -+-+|+.-+.|-+.+.+++.+.|+|||-+|
T Consensus 48 ~~~~~~a~~-~~~k---v~~~i~~-~~~~~~~~~~~~~------------~l~~~~~r~~fi~~iv~~l~~~~~DGidiD 110 (313)
T cd02874 48 ERLIEAAKR-RGVK---PLLVITN-LTNGNFDSELAHA------------VLSNPEARQRLINNILALAKKYGYDGVNID 110 (313)
T ss_pred HHHHHHHHH-CCCe---EEEEEec-CCCCCCCHHHHHH------------HhcCHHHHHHHHHHHHHHHHHhCCCcEEEe
Confidence 567888888 6888 3344433 2210011111110 022566667899999999999999999999
Q ss_pred ccc
Q 046494 363 VQS 365 (724)
Q Consensus 363 ~q~ 365 (724)
+..
T Consensus 111 wE~ 113 (313)
T cd02874 111 FEN 113 (313)
T ss_pred ccc
Confidence 976
No 58
>cd02930 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain. DCR in E. coli is an iron-sulfur flavoenzyme which contains FMN, FAD, and a 4Fe-4S cluster. It is also a monomer, unlike that of its eukaryotic counterparts which form homotetramers and lack the flavin and iron-sulfur cofactors. Metabolism of unsaturated fatty acids requires auxiliary enzymes in addition to those used in b-oxidation. After a given number of cycles through the b-oxidation pathway, those unsaturated fatty acyl-CoAs with double bonds at even-numbered carbon positions contain 2-trans, 4-cis double bonds that can not be modified by enoyl-CoA hydratase. DCR utilizes NADPH to remove the C4-C5 double bond. DCR can catalyze the reduction of both natural fatty acids with cis double bonds, as well as substrates containing trans double bonds. The reaction is initiated by hybrid transfer from NADPH to FAD, which in turn transfers electrons, one at a time, to FMN via the 4Fe-4S cluster. The fully reduced FMN provi
Probab=43.43 E-value=2.9e+02 Score=30.65 Aligned_cols=74 Identities=22% Similarity=0.334 Sum_probs=40.2
Q ss_pred CcHHHHHHHHHHHcCCc-eEEeeeccccccCC----CCCCchhhhhhhhccccccCCccccChhHHHHHHHHH---HHHH
Q 046494 280 NDLHEFIDEIKEKYGLK-YVYMWHALAGYWGG----VLPSSDIMKKDIAMDSLEKYGVGIIDPQKIFDFYNDL---HSYL 351 (724)
Q Consensus 280 ~GLk~lv~~Ik~~~Glk-~vgvWhal~GYWgG----i~P~s~~~~~d~~~~~~~~~G~g~v~p~da~~fy~~~---~~~L 351 (724)
.||+.+++.+|+ +|-| .+=+||+ |++.. +.|.. . . .......... ++.+++.+.-++| .+..
T Consensus 77 ~~~~~l~~~vh~-~g~~~~~QL~h~--G~~~~~~~~~~ps~-~-~--~~~~~~~p~~---mt~~eI~~i~~~f~~aA~~a 146 (353)
T cd02930 77 AGHRLITDAVHA-EGGKIALQILHA--GRYAYHPLCVAPSA-I-R--APINPFTPRE---LSEEEIEQTIEDFARCAALA 146 (353)
T ss_pred HHHHHHHHHHHH-cCCEEEeeccCC--CCCCCCCCCcCCCC-C-C--CCCCCCCCCC---CCHHHHHHHHHHHHHHHHHH
Confidence 499999999999 7855 4557885 44321 11210 0 0 0000000011 2335555555554 3455
Q ss_pred hhcCCCEEEEcc
Q 046494 352 ANSGVDGVKVDV 363 (724)
Q Consensus 352 as~GVD~VKvD~ 363 (724)
.++|+|+|++=.
T Consensus 147 ~~aGfDgVeih~ 158 (353)
T cd02930 147 REAGYDGVEIMG 158 (353)
T ss_pred HHcCCCEEEEec
Confidence 679999999954
No 59
>PRK14837 undecaprenyl pyrophosphate synthase; Provisional
Probab=42.69 E-value=83 Score=33.12 Aligned_cols=38 Identities=11% Similarity=0.330 Sum_probs=22.7
Q ss_pred ceEeecCCCCCCCcchhhHHHHHHHHhhhhccCCCCCCccccc
Q 046494 419 AVARASEDFMPGEPTFQTLHIASVAFNSLLLGEIVVPDWDMFQ 461 (724)
Q Consensus 419 ~~~R~SdDf~p~~p~~~~~hi~~~a~nsl~~g~~~~pDwDMf~ 461 (724)
-++|+|.+---+ -..++++||.-++.-...|||.+..+
T Consensus 176 LlIRTsGE~RLS-----nFLLWQ~ayaElyF~d~lWPdF~~~d 213 (230)
T PRK14837 176 LLIRTGGDMRIS-----NFLLWRIAYCEFIFSNVLWPEYYVNH 213 (230)
T ss_pred EEEECCCccccc-----ccHHHhhhheEEEECCCCCccCCHHH
Confidence 446777743221 12346677877777777888876443
No 60
>COG3325 ChiA Chitinase [Carbohydrate transport and metabolism]
Probab=41.95 E-value=1.1e+02 Score=35.12 Aligned_cols=88 Identities=22% Similarity=0.265 Sum_probs=53.0
Q ss_pred CCcHHHHHHHHHHHcC-Cc---eEEeeeccccccCCCCCCchhhhhhhhccccccCCccccChhHHHHHHHHHHHHHhhc
Q 046494 279 CNDLHEFIDEIKEKYG-LK---YVYMWHALAGYWGGVLPSSDIMKKDIAMDSLEKYGVGIIDPQKIFDFYNDLHSYLANS 354 (724)
Q Consensus 279 ~~GLk~lv~~Ik~~~G-lk---~vgvWhal~GYWgGi~P~s~~~~~d~~~~~~~~~G~g~v~p~da~~fy~~~~~~Las~ 354 (724)
..|.=....++|++++ +| .||-|--- +|.++- .-++...+.|=+.-.++++.+
T Consensus 110 ~~G~~~~L~~lk~~~~d~k~l~SIGGWs~S----~~F~~~-------------------aad~a~re~Fa~saVe~~r~~ 166 (441)
T COG3325 110 LKGHFGALFDLKATYPDLKTLISIGGWSDS----GGFSDM-------------------AADDASRENFAKSAVEFMRTY 166 (441)
T ss_pred ccchHHHHHHHhhhCCCceEEEeecccccC----CCcchh-------------------hcCHHHHHHHHHHHHHHHHhc
Confidence 3566666788888877 66 34444221 122221 113456678888999999999
Q ss_pred CCCEEEEccccchhhccCCCCChhhHHHHHHHHHH
Q 046494 355 GVDGVKVDVQSLMETLGSGYGGRVLLTRQYQQALE 389 (724)
Q Consensus 355 GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~Al~ 389 (724)
++|+|-+|+-+....-.++..+|+++.+.|..-|+
T Consensus 167 ~FDGVDIDWEYP~~~~~~~~~~~~~d~~ny~~Ll~ 201 (441)
T COG3325 167 GFDGVDIDWEYPGSGGDAGNCGRPKDKANYVLLLQ 201 (441)
T ss_pred CCCceeeccccCCCCCCCCCCCCcccHHHHHHHHH
Confidence 99999999977433222233345555555544443
No 61
>TIGR03326 rubisco_III ribulose bisphosphate carboxylase, type III. Members of this protein family are the archaeal, single chain, type III form of ribulose bisphosphate carboxylase, or RuBisCO. Members act is a three-step pathway for conversion of the sugar moiety of AMP to two molecules of 3-phosphoglycerate. Many of these species use ADP-dependent sugar kinases, which form AMP, for glycolysis.
Probab=40.66 E-value=99 Score=35.36 Aligned_cols=51 Identities=14% Similarity=-0.017 Sum_probs=30.2
Q ss_pred HHhhcCCCEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeecc
Q 046494 350 YLANSGVDGVKVDVQSLMETLGSGYGGRVLLTRQYQQALEQSVAWNFKDNNLICCMS 406 (724)
Q Consensus 350 ~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cMs 406 (724)
.++.-|||+||=|=.-....+ ..-.+-.++..+|++++-.+ +|+..++.+.
T Consensus 168 ~~~~GGvD~IKDDE~l~~q~~----~p~~eRv~~~~~a~~~a~~e--TG~~~~ya~N 218 (412)
T TIGR03326 168 ELWSGGVDLLKDDENLTSQPF----NRFEERVEKLYKVRDKVEAE--TGERKEYLAN 218 (412)
T ss_pred HHHhcCCceeecCCCCCCCCC----ccHHHHHHHHHHHHHHHHHH--hCCcceEEEE
Confidence 357889999999943221111 12234466677777776555 5665655543
No 62
>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas.
Probab=40.18 E-value=1.1e+02 Score=32.18 Aligned_cols=65 Identities=22% Similarity=0.449 Sum_probs=43.8
Q ss_pred CcHHHHHHHHHHHcCCceEEeeeccccccCCCCCCchhhhhhhhccccccCCccccChhHHHHHHHHHHHHHhhcCCCEE
Q 046494 280 NDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKKDIAMDSLEKYGVGIIDPQKIFDFYNDLHSYLANSGVDGV 359 (724)
Q Consensus 280 ~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~d~~~~~~~~~G~g~v~p~da~~fy~~~~~~Las~GVD~V 359 (724)
..+..+++..|+ .|+| ++.++.| |. .+. . . --+.+|+..+.|-+.+.+++.+.|+|||
T Consensus 46 ~~~~~~~~~~~~-~~~k---vl~sigg-~~---~~~-~-~------------~~~~~~~~r~~fi~~lv~~~~~~~~DGI 103 (253)
T cd06545 46 SELNSVVNAAHA-HNVK---ILISLAG-GS---PPE-F-T------------AALNDPAKRKALVDKIINYVVSYNLDGI 103 (253)
T ss_pred HHHHHHHHHHHh-CCCE---EEEEEcC-CC---CCc-c-h------------hhhcCHHHHHHHHHHHHHHHHHhCCCce
Confidence 356677888887 5888 3445533 21 111 0 0 0123567777899999999999999999
Q ss_pred EEccccc
Q 046494 360 KVDVQSL 366 (724)
Q Consensus 360 KvD~q~~ 366 (724)
-+|+...
T Consensus 104 diDwE~~ 110 (253)
T cd06545 104 DVDLEGP 110 (253)
T ss_pred eEEeecc
Confidence 9999763
No 63
>KOG1066 consensus Glucosidase II catalytic (alpha) subunit and related enzymes, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]
Probab=38.10 E-value=89 Score=37.85 Aligned_cols=103 Identities=20% Similarity=0.401 Sum_probs=67.3
Q ss_pred ceEEEEEecCChhHHHHHHHHHHHHhcCcCCCccccccCcccccccc--cchhhhhhccCHHHHHHHHHHHHHCCCCCcE
Q 046494 153 FEAVFINSGDNPFELIKDSIKILEKHKGTFSHLENKKIPRHLDWFGW--CTWDAFYKQVNPQGIKEGLHSFLEGGCSPRF 230 (724)
Q Consensus 153 ~~~v~v~~g~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~~~~GW--cTW~af~~~vte~~I~~~l~~l~~~Gi~~~~ 230 (724)
..-+++-.|.+|-+++++.-++ .++ ..+|.++. +|| |-||- .+|+.|++-=+.+.+..||+..
T Consensus 326 iiDvFi~lGP~~~Dv~~qyaaL----TG~------~~LPplFs-iGYHQcRWNY----~DE~DV~~Vd~~FDehdiP~Dv 390 (915)
T KOG1066|consen 326 IIDVFIFLGPKPSDVFRQYAAL----TGT------TPLPPLFS-IGYHQCRWNY----NDEEDVLTVDQGFDEHDIPYDV 390 (915)
T ss_pred cEEEEEEeCCChhHHHHHHHhh----cCC------CCCCchhh-cchhhccccc----cchhhhhhhhcCccccCCccce
Confidence 3447788899988877665443 122 24565553 676 88872 5788888888899999999777
Q ss_pred EEEecCcCcCccCCCCCCCCccccccccccccccc-cCCCCCCCCCCCCCCcHHHHHHHHHHHcCCceEEe
Q 046494 231 LVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIK-ENCKFNSSGSDNSCNDLHEFIDEIKEKYGLKYVYM 300 (724)
Q Consensus 231 viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~-~n~KFP~~~~~~~~~GLk~lv~~Ik~~~Glk~vgv 300 (724)
+=+| +....+. |. |. +..|||.+ +++++++.+ .|=|.|.+
T Consensus 391 iWLD-----IEhtdgK-------------rY--FTWDk~~FP~P---------~~Ml~kLa~-kgRklV~I 431 (915)
T KOG1066|consen 391 IWLD-----IEHTDGK-------------RY--FTWDKHKFPNP---------KDMLKKLAS-KGRKLVTI 431 (915)
T ss_pred EEEe-----eeecCCc-------------ee--EeeccccCCCH---------HHHHHHHHh-cCCceEEE
Confidence 6555 4432221 11 33 35799954 788899988 58775543
No 64
>PRK12568 glycogen branching enzyme; Provisional
Probab=37.62 E-value=5.1e+02 Score=32.02 Aligned_cols=68 Identities=19% Similarity=0.221 Sum_probs=39.4
Q ss_pred hHHHHHHHHHHHHH-hhcCCCEEEEccccchhh----------ccCCCCChhhH-HHHHHHHHHHHHHhhCCCCceEeec
Q 046494 338 QKIFDFYNDLHSYL-ANSGVDGVKVDVQSLMET----------LGSGYGGRVLL-TRQYQQALEQSVAWNFKDNNLICCM 405 (724)
Q Consensus 338 ~da~~fy~~~~~~L-as~GVD~VKvD~q~~l~~----------l~~~~~g~~~l-~~ay~~Al~~s~~~~f~~~~iI~cM 405 (724)
..+++|.-+-..++ .+.||||+-+|+-..+-. .....+++..+ +..+.+.|...+.+.+|+.-+|.=-
T Consensus 383 peVr~~li~~a~~Wl~eyhIDG~R~DAva~mly~d~~r~~g~w~pn~~gg~en~ea~~Fl~~ln~~v~~~~P~~~~IAEe 462 (730)
T PRK12568 383 PEVTAYLLGSALEWIEHYHLDGLRVDAVASMLYRDYGRAEGEWVPNAHGGRENLEAVAFLRQLNREIASQFPGVLTIAEE 462 (730)
T ss_pred HHHHHHHHHHHHHHHHHhCceEEEEcCHhHhhhhccccccccccccccCCccChHHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 45777766555555 578999999997543211 11112333222 3345666677677778865455543
No 65
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=37.34 E-value=4e+02 Score=32.58 Aligned_cols=86 Identities=14% Similarity=0.285 Sum_probs=52.3
Q ss_pred CcHHHHHHHHHHHcCCceEEeeeccccccCCCCCCchhhhhhhhccc----cccCCccccCh--hHHHHHHHHHHHHHhh
Q 046494 280 NDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKKDIAMDS----LEKYGVGIIDP--QKIFDFYNDLHSYLAN 353 (724)
Q Consensus 280 ~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~d~~~~~----~~~~G~g~v~p--~da~~fy~~~~~~Las 353 (724)
.++-++.=.|+.|.|+| |+-|+.+... . ..+.. ...+.+.... ....+..-++| ++++++..+.+.-|+.
T Consensus 380 d~f~~~aw~l~~r~~v~-v~AWmp~~~~-~-~~~~~-~~~~~~~~~~~~~~~~~~~~~rl~P~~pe~r~~i~~i~~dla~ 455 (671)
T PRK14582 380 DLFNRVAWQLRTRAGVN-VYAWMPVLSF-D-LDPTL-PRVKRLDTGEGKAQIHPEQYRRLSPFDDRVRAQVGMLYEDLAG 455 (671)
T ss_pred CCcCHHHHHHHHhhCCE-EEEeccceee-c-cCCCc-chhhhccccCCccccCCCCCcCCCCCCHHHHHHHHHHHHHHHH
Confidence 47788777787778998 9999987642 1 11211 1111111110 11111111333 5688899999988887
Q ss_pred -cCCCEEEEccccchhh
Q 046494 354 -SGVDGVKVDVQSLMET 369 (724)
Q Consensus 354 -~GVD~VKvD~q~~l~~ 369 (724)
..||||-.|.-..+..
T Consensus 456 ~~~~dGilf~Dd~~l~d 472 (671)
T PRK14582 456 HAAFDGILFHDDAVLSD 472 (671)
T ss_pred hCCCceEEecccccccc
Confidence 5999999998776544
No 66
>cd06546 GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase 3), an uncharacterized protein from the human fungal pathogen Coccidioides posadasii. CTS3 has a chitinase-like glycosyl hydrolase family 18 (GH18) domain; and has homologs in bacteria as well as fungi.
Probab=37.21 E-value=1.3e+02 Score=32.01 Aligned_cols=30 Identities=27% Similarity=0.647 Sum_probs=26.2
Q ss_pred ChhHHHHHHHHHHHHHhhcCCCEEEEcccc
Q 046494 336 DPQKIFDFYNDLHSYLANSGVDGVKVDVQS 365 (724)
Q Consensus 336 ~p~da~~fy~~~~~~Las~GVD~VKvD~q~ 365 (724)
+++....|++.+.+++.++|+|||-+|+.+
T Consensus 93 ~~~~r~~f~~s~~~~~~~~~~DGiDiDwE~ 122 (256)
T cd06546 93 DDEDFERYYGQLRDMIRRRGLDGLDLDVEE 122 (256)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCceEEeeec
Confidence 356778899999999999999999999865
No 67
>PRK14705 glycogen branching enzyme; Provisional
Probab=36.64 E-value=4.7e+02 Score=34.21 Aligned_cols=68 Identities=21% Similarity=0.271 Sum_probs=39.7
Q ss_pred hhHHHHHHHHHHHHH-hhcCCCEEEEccccchhh----------ccCCCCChhhH-HHHHHHHHHHHHHhhCCCCceEee
Q 046494 337 PQKIFDFYNDLHSYL-ANSGVDGVKVDVQSLMET----------LGSGYGGRVLL-TRQYQQALEQSVAWNFKDNNLICC 404 (724)
Q Consensus 337 p~da~~fy~~~~~~L-as~GVD~VKvD~q~~l~~----------l~~~~~g~~~l-~~ay~~Al~~s~~~~f~~~~iI~c 404 (724)
...++.|.-+-..|+ .+.+|||+-+|.-..+-. ....++|+..+ +-.+.+-|.+.+.+.+|+.-+|.-
T Consensus 878 ~~eVr~fli~~a~~Wl~eyhiDGfR~Dav~~mly~Dysr~~g~w~pn~~gg~en~~ai~fl~~ln~~v~~~~p~~~~IAE 957 (1224)
T PRK14705 878 RTEVRNFLVANALYWLDEFHIDGLRVDAVASMLYLDYSREEGQWRPNRFGGRENLEAISFLQEVNATVYKTHPGAVMIAE 957 (1224)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCcEEEeehhhhhhcccccccccccccccCCccChHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 356888876666665 568999999998643311 11123443322 334555566666666776544443
No 68
>TIGR00055 uppS undecaprenyl diphosphate synthase. Alternate name: undecaprenyl pyrophosphate synthetase. Activity has been demonstrated experimentally for members of this family from Micrococcus luteus, E. coli, Haemophilus influenzae, and Streptococcus pneumoniae.
Probab=36.54 E-value=1.1e+02 Score=32.25 Aligned_cols=39 Identities=18% Similarity=0.342 Sum_probs=23.7
Q ss_pred cceEeecCCCCCCCcchhhHHHHHHHHhhhhccCCCCCCccccc
Q 046494 418 SAVARASEDFMPGEPTFQTLHIASVAFNSLLLGEIVVPDWDMFQ 461 (724)
Q Consensus 418 ~~~~R~SdDf~p~~p~~~~~hi~~~a~nsl~~g~~~~pDwDMf~ 461 (724)
--++|+|..---+ -..++++||.-++.-...|||.+..+
T Consensus 172 DLlIRTsGE~RLS-----nFLlWQ~ayaEl~F~~~lWPdF~~~~ 210 (226)
T TIGR00055 172 DLLIRTSGEMRIS-----NFLLWQSSYAELYFTDILWPDFDPQD 210 (226)
T ss_pred CEEEeCCCccccc-----CcHHHHHhceEEEECCCCCCcCCHHH
Confidence 3456888743221 12346677877777777888876543
No 69
>cd08207 RLP_NonPhot Ribulose bisphosphate carboxylase like proteins from nonphototrophic bacteria. Ribulose bisphosphate carboxylase (Rubisco) plays an important role in the Calvin reductive pentose phosphate pathway. It catalyzes the primary CO2 fixation step. Rubisco is activated by carbamylation of an active site lysine, stabilized by a divalent cation, which then catalyzes the proton abstraction from the substrate ribulose 1,5 bisphosphate (RuBP) and leads to the formation of two molecules of 3-phosphoglycerate. Members of the Rubisco family can be divided into 4 subgroups, Form I-IV, which differ in their taxonomic distribution and subunit composition. Form I-III have Rubisco activity, while Form IV, also called Rubisco-like proteins (RLP), are missing critical active site residues and therefore do not catalyze CO2 fixation. They are believed to utilize a related enzymatic mechanism, but have divergent functions. The specific function of this subgroup is unknown.
Probab=35.73 E-value=1.1e+02 Score=34.78 Aligned_cols=51 Identities=14% Similarity=0.113 Sum_probs=29.4
Q ss_pred HHhhcCCCEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeecc
Q 046494 350 YLANSGVDGVKVDVQSLMETLGSGYGGRVLLTRQYQQALEQSVAWNFKDNNLICCMS 406 (724)
Q Consensus 350 ~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cMs 406 (724)
.++.-|||++|=|=.-....+ ..-.+-.++..+|++++-.+ +|+..++...
T Consensus 167 ~~~~GGvD~IKDDE~l~~q~~----~p~~eRv~~~~~a~~~a~~e--TG~~~~y~~N 217 (406)
T cd08207 167 QLAAAGIDFIKDDELLANPPY----SPLDERVRAVMRVINDHAQR--TGRKVMYAFN 217 (406)
T ss_pred HHHhCCCCcccccccCCCCCC----CcHHHHHHHHHHHHHHHHHh--hCCcceEEEe
Confidence 457789999999943211111 11223356667777776555 5665665544
No 70
>PF15016 DUF4520: Domain of unknown function (DUF4520)
Probab=35.66 E-value=1.5e+02 Score=26.49 Aligned_cols=45 Identities=27% Similarity=0.382 Sum_probs=35.0
Q ss_pred EEEEeeecceeEEEecCCCceEeecCeeeeeEEeC----CCcEEEEEcC
Q 046494 668 IKIKGKGCGRFGAYSSSKPKCCMVDTKEEEFTYNA----EDGLLTVKLP 712 (724)
Q Consensus 668 ~~v~vkg~G~~g~YsS~~P~~~~vdg~~~~f~y~~----~~glltv~lp 712 (724)
-+..+-|.|+|-+|+..+=+.+-.|+.-..+.|+- +.+..++-+|
T Consensus 8 ~e~~i~~~GrF~AysDgrVr~~F~Drt~L~l~~~~~~~~~~~~c~l~~p 56 (85)
T PF15016_consen 8 EESSIPGVGRFTAYSDGRVRVHFDDRTILTLIWNFSSREELGWCKLTFP 56 (85)
T ss_pred EEEecCCceEEEEEcCCeEEEEEcCCCEEEEEeCCCCcccCCEEEEEcc
Confidence 34456789999999999998888999998998821 2467777666
No 71
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=34.09 E-value=6.3e+02 Score=29.91 Aligned_cols=28 Identities=18% Similarity=0.296 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHH-hhcCCCEEEEccccc
Q 046494 339 KIFDFYNDLHSYL-ANSGVDGVKVDVQSL 366 (724)
Q Consensus 339 da~~fy~~~~~~L-as~GVD~VKvD~q~~ 366 (724)
.+++|+-+...++ .+.||||+-+|.-..
T Consensus 220 ~vr~~i~~~~~~W~~e~~iDGfR~D~~~~ 248 (542)
T TIGR02402 220 EVRRYILDNALYWLREYHFDGLRLDAVHA 248 (542)
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEeCHHH
Confidence 6777766655555 578999999998553
No 72
>cd08148 RuBisCO_large Ribulose bisphosphate carboxylase large chain. Ribulose bisphosphate carboxylase (Rubisco) plays an important role in the Calvin reductive pentose phosphate pathway. It catalyzes the primary CO2 fixation step. Rubisco is activated by carbamylation of an active site lysine, stabilized by a divalent cation, which then catalyzes the proton abstraction from the substrate ribulose 1,5 bisphosphate (RuBP) and leads to the formation of two molecules of 3-phosphoglycerate. Members of the Rubisco family can be divided into 4 subgroups, Form I-IV, which differ in their taxonomic distribution and subunit composition. Form I-III have Rubisco activity, while Form IV, also called Rubisco-like proteins (RLP), are missing critical active site residues and therefore do not catalyze CO2 fixation. They are believed to utilize a related enzymatic mechanism, but have divergent functions.
Probab=31.51 E-value=1.5e+02 Score=33.49 Aligned_cols=51 Identities=14% Similarity=0.022 Sum_probs=29.9
Q ss_pred HHhhcCCCEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeecc
Q 046494 350 YLANSGVDGVKVDVQSLMETLGSGYGGRVLLTRQYQQALEQSVAWNFKDNNLICCMS 406 (724)
Q Consensus 350 ~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cMs 406 (724)
.++.-|+|+||=|=.-....+ ..-.+-.++..+|++++-.+ +|+..++...
T Consensus 151 ~~~~GG~D~IKDDE~l~~q~~----~p~~eRv~~~~~a~~~a~~e--TG~~~~y~~N 201 (366)
T cd08148 151 AAALGGLDLIKDDETLTDQPF----CPLRDRITEVAAALDRVQEE--TGEKKLYAVN 201 (366)
T ss_pred HHHhCCCCccccccccCCCCC----CcHHHHHHHHHHHHHHHHHh--hCCcceEEEE
Confidence 357889999999943211111 12234466677777776555 5665665544
No 73
>PRK13523 NADPH dehydrogenase NamA; Provisional
Probab=31.45 E-value=6e+02 Score=28.14 Aligned_cols=120 Identities=18% Similarity=0.183 Sum_probs=63.6
Q ss_pred ccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcHHHHHH
Q 046494 208 QVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKENCKFNSSGSDNSCNDLHEFID 287 (724)
Q Consensus 208 ~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n~KFP~~~~~~~~~GLk~lv~ 287 (724)
.+|++. .+..+..+++|+- .+|.-...-+..... +...+. +..++..| +++.+++
T Consensus 34 ~~t~~~-~~~y~~rA~gG~G--lIi~~~~~v~~~~~~------------~~~~~~-~~~d~~i~---------~~r~l~d 88 (337)
T PRK13523 34 KVTNFH-LIHYGTRAAGQVG--LVIVEATAVLPEGRI------------SDKDLG-IWDDEHIE---------GLHKLVT 88 (337)
T ss_pred CCCHHH-HHHHHHHHcCCCe--EEEECCeEECccccC------------CCCcee-cCCHHHHH---------HHHHHHH
Confidence 356544 4566778888877 666654433221110 001111 22223345 9999999
Q ss_pred HHHHHcCCc-eEEeeeccccccCC-----CCCCchhhhhhhhcc--ccccCCccccChhHHHHHHHHH---HHHHhhcCC
Q 046494 288 EIKEKYGLK-YVYMWHALAGYWGG-----VLPSSDIMKKDIAMD--SLEKYGVGIIDPQKIFDFYNDL---HSYLANSGV 356 (724)
Q Consensus 288 ~Ik~~~Glk-~vgvWhal~GYWgG-----i~P~s~~~~~d~~~~--~~~~~G~g~v~p~da~~fy~~~---~~~Las~GV 356 (724)
.+|+ +|-+ .+=+||+ |.+.. +.|.. .... ..... -++.+++.+.-++| .+...++|+
T Consensus 89 ~vh~-~G~~i~~QL~H~--G~~~~~~~~~~~ps~------~~~~~~~~~p~---~mt~eeI~~ii~~f~~aA~~a~~aGf 156 (337)
T PRK13523 89 FIHD-HGAKAAIQLAHA--GRKAELEGDIVAPSA------IPFDEKSKTPV---EMTKEQIKETVLAFKQAAVRAKEAGF 156 (337)
T ss_pred HHHh-cCCEEEEEccCC--CCCCCCCCCccCCCC------CCCCCCCCCCC---cCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999 7854 3456774 44321 11110 0000 00001 12346666666655 346678999
Q ss_pred CEEEEccc
Q 046494 357 DGVKVDVQ 364 (724)
Q Consensus 357 D~VKvD~q 364 (724)
|+|.+-+-
T Consensus 157 DgVeih~a 164 (337)
T PRK13523 157 DVIEIHGA 164 (337)
T ss_pred CEEEEccc
Confidence 99999765
No 74
>cd08212 RuBisCO_large_I Ribulose bisphosphate carboxylase large chain, Form I. Ribulose bisphosphate carboxylase (Rubisco) plays an important role in the Calvin reductive pentose phosphate pathway. It catalyzes the primary CO2 fixation step. Rubisco is activated by carbamylation of an active site lysine, stabilized by a divalent cation, which then catalyzes the proton abstraction from the substrate ribulose 1,5 bisphosphate (RuBP) and leads to the formation of two molecules of 3-phosphoglycerate. Members of the Rubisco family can be divided into 4 subgroups, Form I-IV , which differ in their taxonomic distribution and subunit composition. Form I is the most abundant class, present in plants, algae, and bacteria, and forms large complexes composed of 8 large and 8 small subunits.
Probab=30.95 E-value=1.5e+02 Score=34.24 Aligned_cols=53 Identities=11% Similarity=-0.118 Sum_probs=30.0
Q ss_pred HHhhcCCCEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeeccCC
Q 046494 350 YLANSGVDGVKVDVQSLMETLGSGYGGRVLLTRQYQQALEQSVAWNFKDNNLICCMSHN 408 (724)
Q Consensus 350 ~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cMs~~ 408 (724)
.++.-|||+||=|=.-....+ ..-.+-.++..+|++++-.+ +|+..+++.--.
T Consensus 169 ~~~~GGvD~IKDDE~l~~~~~----~p~~~Rv~~~~~a~~~a~~e--TG~~~~y~~NiT 221 (450)
T cd08212 169 ECLRGGLDFTKDDENINSQPF----MRWRDRFLFVAEAVNKAQAE--TGEVKGHYLNVT 221 (450)
T ss_pred HHHccCCcccccCccCCCCCC----CCHHHHHHHHHHHHHHHHHh--hCCcceeecccc
Confidence 357889999999943211111 11223355666777765544 566666665433
No 75
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=28.85 E-value=4e+02 Score=31.47 Aligned_cols=30 Identities=27% Similarity=0.573 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHHHHhhcCCCEEEEccccch
Q 046494 338 QKIFDFYNDLHSYLANSGVDGVKVDVQSLM 367 (724)
Q Consensus 338 ~da~~fy~~~~~~Las~GVD~VKvD~q~~l 367 (724)
+.++++..+..+++.+-||||+-+|+-..+
T Consensus 169 p~v~~~i~~~~~~W~~~giDGfRlDa~~~i 198 (543)
T TIGR02403 169 PEVREELKDVVNFWRDKGVDGFRLDVINLI 198 (543)
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeeehhh
Confidence 457777777888888899999999987654
No 76
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A ....
Probab=28.78 E-value=5.5e+02 Score=26.39 Aligned_cols=76 Identities=16% Similarity=0.339 Sum_probs=42.5
Q ss_pred ccccccchhhhhhccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCcc-CCCCCCCCccccccccccccccccCCCCCCC
Q 046494 195 DWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETIN-EFCKDGEPLIEGTQFAIRLVDIKENCKFNSS 273 (724)
Q Consensus 195 ~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~-d~~~~~~~~~~~~~~~~~L~~~~~n~KFP~~ 273 (724)
...|.+++ ++... .+.+.++.+++.|+..-.+-|. |+.... .... .+.+ ..+
T Consensus 9 ~~~G~n~~--w~~~~---~~~~~~~~~~~~G~n~VRi~v~--~~~~~~~~~~~----------------~~~~-~~~--- 61 (281)
T PF00150_consen 9 NWRGFNTH--WYNPS---ITEADFDQLKALGFNTVRIPVG--WEAYQEPNPGY----------------NYDE-TYL--- 61 (281)
T ss_dssp EEEEEEET--TSGGG---SHHHHHHHHHHTTESEEEEEEE--STSTSTTSTTT----------------SBTH-HHH---
T ss_pred Eeeeeecc--cCCCC---CHHHHHHHHHHCCCCEEEeCCC--HHHhcCCCCCc----------------cccH-HHH---
Confidence 45566666 22221 6677788999999995444444 633321 1110 0000 011
Q ss_pred CCCCCCCcHHHHHHHHHHHcCCceEEeeecc
Q 046494 274 GSDNSCNDLHEFIDEIKEKYGLKYVYMWHAL 304 (724)
Q Consensus 274 ~~~~~~~GLk~lv~~Ik~~~Glk~vgvWhal 304 (724)
.-|+.+|+..++ +||+-+--+|..
T Consensus 62 ------~~ld~~v~~a~~-~gi~vild~h~~ 85 (281)
T PF00150_consen 62 ------ARLDRIVDAAQA-YGIYVILDLHNA 85 (281)
T ss_dssp ------HHHHHHHHHHHH-TT-EEEEEEEES
T ss_pred ------HHHHHHHHHHHh-CCCeEEEEeccC
Confidence 257778888887 899977667775
No 77
>TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type. Assignment of this protein family as cysteinyl-tRNA synthetase is controversial, supported by PubMed:11333988 but challenged by PubMed:14679218. Members of this family from Deinococcus radiodurans (bacterial) and Methanococcus jannaschii (archaeal), species lacking a conventional cysteinyl-tRNA synthetase (Cys--tRNA ligase), have been indicated to be a novel form of that enzyme, perhaps distantly related to class I tRNA ligases. The member from Thermotoga maritima is presumed to be a second isozyme of cysteinyl-tRNA synthetase. A number of homologous but more distantly related proteins are annotated as alpha-1,4 polygalactosaminidases.
Probab=28.72 E-value=5.7e+02 Score=28.24 Aligned_cols=67 Identities=10% Similarity=0.053 Sum_probs=39.3
Q ss_pred hHHHHHHHHHHHHHhhcCCCEEEEccccchhhccCCCCChhhHHHH---HHHHHHHHHHhhCCCCceEeecc
Q 046494 338 QKIFDFYNDLHSYLANSGVDGVKVDVQSLMETLGSGYGGRVLLTRQ---YQQALEQSVAWNFKDNNLICCMS 406 (724)
Q Consensus 338 ~da~~fy~~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~a---y~~Al~~s~~~~f~~~~iI~cMs 406 (724)
++.+.+..+....+.+.|+|||=.|+............++....++ +-.+|.+.+++.+|+ ++-++-
T Consensus 143 ~~W~~il~~rl~~l~~kGfDGvfLD~lDsy~~~~~~~~~~~~~~~~m~~~i~~Ia~~ar~~~P~--~~II~N 212 (315)
T TIGR01370 143 PEWKAIAFSYLDRVIAQGFDGVYLDLIDAFEYWAENGDNRPGAAAEMIAFVCEIAAYARAQNPQ--FVIIPQ 212 (315)
T ss_pred HHHHHHHHHHHHHHHHcCCCeEeeccchhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHCCC--EEEEec
Confidence 3467777766778889999999999977654433221223333333 344444445666663 444443
No 78
>cd08205 RuBisCO_IV_RLP Ribulose bisphosphate carboxylase like proteins, Rubisco-Form IV. Ribulose bisphosphate carboxylase (Rubisco) plays an important role in the Calvin reductive pentose phosphate pathway. It catalyzes the primary CO2 fixation step. Rubisco is activated by carbamylation of an active site lysine, stabilized by a divalent cation, which then catalyzes the proton abstraction from the substrate ribulose 1,5 bisphosphate (RuBP) and leads to the formation of two molecules of 3-phosphoglycerate. Members of the Rubisco family can be divided into 4 subgroups, Form I-IV, which differ in their taxonomic distribution and subunit composition. Form I-III have Rubisco activity, while Form IV, also called Rubisco-like proteins (RLP), are missing critical active site residues and therefore do not catalyze CO2 fixation. They are believed to utilize a related enzymatic mechanism, but have divergent functions, like for example 2,3-diketo-5-methylthiopentyl-1-phosphate enolase or 5-methyl
Probab=28.36 E-value=2.2e+02 Score=32.03 Aligned_cols=44 Identities=23% Similarity=0.150 Sum_probs=25.4
Q ss_pred HHHHHHHhhcCCCEEEEccccchhhccCCCCChhhHHHHHHHHHHHHH
Q 046494 345 NDLHSYLANSGVDGVKVDVQSLMETLGSGYGGRVLLTRQYQQALEQSV 392 (724)
Q Consensus 345 ~~~~~~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~Al~~s~ 392 (724)
..+...|.+.|||+||.|-...-. .+-...+-.+...+|++++-
T Consensus 149 a~~~~~l~~gGvD~Ikdde~~ge~----~~~~~eER~~~v~~av~~a~ 192 (367)
T cd08205 149 AELAYELALGGIDLIKDDELLADQ----PYAPFEERVRACMEAVRRAN 192 (367)
T ss_pred HHHHHHHHhcCCCeeeccccccCc----ccCCHHHHHHHHHHHHHHHH
Confidence 344556788999999999643110 11123344555667776653
No 79
>COG0502 BioB Biotin synthase and related enzymes [Coenzyme metabolism]
Probab=28.24 E-value=97 Score=34.42 Aligned_cols=30 Identities=23% Similarity=0.374 Sum_probs=24.4
Q ss_pred ccccchhhhhh-------ccCHHHHHHHHHHHHHCCC
Q 046494 197 FGWCTWDAFYK-------QVNPQGIKEGLHSFLEGGC 226 (724)
Q Consensus 197 ~GWcTW~af~~-------~vte~~I~~~l~~l~~~Gi 226 (724)
-+||+=.+.+. -.+.+.|++.++.+++.|.
T Consensus 65 C~yC~qS~~~~~~~~~~~l~~~eeIle~Ak~ak~~Ga 101 (335)
T COG0502 65 CAYCSQSARYKTGVKARKLMEVEEILEAAKKAKAAGA 101 (335)
T ss_pred CCCccccccCcCCCchhhcCCHHHHHHHHHHHHHcCC
Confidence 56787777553 4789999999999999993
No 80
>cd02803 OYE_like_FMN_family Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=28.05 E-value=1.2e+02 Score=32.84 Aligned_cols=79 Identities=19% Similarity=0.266 Sum_probs=40.2
Q ss_pred CcHHHHHHHHHHHcCCc-eEEeeeccccccCCCCCCchhhhhhhhccccc--cCC-c-cccChhHHHHHHHHH---HHHH
Q 046494 280 NDLHEFIDEIKEKYGLK-YVYMWHALAGYWGGVLPSSDIMKKDIAMDSLE--KYG-V-GIIDPQKIFDFYNDL---HSYL 351 (724)
Q Consensus 280 ~GLk~lv~~Ik~~~Glk-~vgvWhal~GYWgGi~P~s~~~~~d~~~~~~~--~~G-~-g~v~p~da~~fy~~~---~~~L 351 (724)
.++|.+++.||+ +|-+ .+=+||+ |+... +.-.. ...++-.... ... . --.+.+++.+.-++| .+..
T Consensus 77 ~~~~~~~~~vh~-~g~~~~~Ql~h~--G~~~~--~~~~~-~~~~~~s~~~~~~~~~~~~~mt~~ei~~~i~~~~~aA~~a 150 (327)
T cd02803 77 PGLRKLTEAVHA-HGAKIFAQLAHA--GRQAQ--PNLTG-GPPPAPSAIPSPGGGEPPREMTKEEIEQIIEDFAAAARRA 150 (327)
T ss_pred HHHHHHHHHHHh-CCCHhhHHhhCC--CcCCC--CcCCC-CCccCCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 499999999999 6844 3457885 33211 10000 0000000000 000 0 012234555555544 4566
Q ss_pred hhcCCCEEEEccc
Q 046494 352 ANSGVDGVKVDVQ 364 (724)
Q Consensus 352 as~GVD~VKvD~q 364 (724)
.++|+|+|++-..
T Consensus 151 ~~aGfDgveih~~ 163 (327)
T cd02803 151 KEAGFDGVEIHGA 163 (327)
T ss_pred HHcCCCEEEEcch
Confidence 7899999999875
No 81
>KOG2500 consensus Uncharacterized conserved protein [Function unknown]
Probab=27.68 E-value=42 Score=35.02 Aligned_cols=34 Identities=26% Similarity=0.416 Sum_probs=28.7
Q ss_pred cceEEecCCCCceEEEecCC-ceEEEEEeeeeEec
Q 046494 601 SGVLTKLPKKGNLEVSLATL-KCEIYTICPIRVLG 634 (724)
Q Consensus 601 ~g~~~~l~~~~~~~v~L~~~-~~ei~t~~Pv~~~~ 634 (724)
+|++.++.++....+.|+.+ ..|+|.-|||.+..
T Consensus 43 tGrlrvvakg~~~~ikLeD~tsg~LfA~c~id~~~ 77 (253)
T KOG2500|consen 43 TGRLRVVAKGERCEIKLEDKTSGELFAQCPIDEGP 77 (253)
T ss_pred cceeEEEEcCcEEEEEeccCCchhhhhhCcccCCC
Confidence 67888888889999999976 48999999998654
No 82
>cd08206 RuBisCO_large_I_II_III Ribulose bisphosphate carboxylase large chain, Form I,II,III. Ribulose bisphosphate carboxylase (Rubisco) plays an important role in the Calvin reductive pentose phosphate pathway. It catalyzes the primary CO2 fixation step. Rubisco is activated by carbamylation of an active site lysine, stabilized by a divalent cation, which then catalyzes the proton abstraction from the substrate ribulose 1,5 bisphosphate (RuBP) and leads to the formation of two molecules of 3-phosphoglycerate. Members of the Rubisco family can be divided into 4 subgroups, Form I-IV, which differ in their taxonomic distribution and subunit composition. Form I-III have Rubisco activity, while Form IV, also called Rubico-like proteins (RLP), are missing critical active site residues.
Probab=27.25 E-value=1.9e+02 Score=33.12 Aligned_cols=53 Identities=13% Similarity=-0.037 Sum_probs=32.5
Q ss_pred HHhhcCCCEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeeccCC
Q 046494 350 YLANSGVDGVKVDVQSLMETLGSGYGGRVLLTRQYQQALEQSVAWNFKDNNLICCMSHN 408 (724)
Q Consensus 350 ~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cMs~~ 408 (724)
.++.-|||+||=|-.-.... +..-.+-.++..+|++++-.+ +|+..++.+...
T Consensus 156 ~~~~GGiD~IKDDE~l~~q~----~~p~~eRv~~~~~a~~~a~~e--TG~~~~y~~NiT 208 (414)
T cd08206 156 EALRGGLDFVKDDENQNSQP----FMRFEDRILFVAEAMDKAEAE--TGEAKGHYLNIT 208 (414)
T ss_pred HHHhcCCcccccCccCCCCC----CCcHHHHHHHHHHHHHHHHHh--hCCcceEEeccC
Confidence 35778999999996422111 122234466777888876555 566677665443
No 83
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase. These enzymes adopt a TIM barrel structure. IMP dehydrogenase (1.1.1.205 from EC) (IMPDH) catalyzes the rate-limiting reaction of de novo GTP biosynthesis, the NAD-dependent reduction of IMP into XMP []. Inosine 5-phosphate + NAD+ + H2O = xanthosine 5-phosphate + NADH IMP dehydrogenase is associated with cell proliferation and is a possible target for cancer chemotherapy. Mammalian and bacterial IMPDHs are tetramers of identical chains. There are two IMP dehydrogenase isozymes in humans []. IMP dehydrogenase nearly always contains a long insertion that has two CBS domains within it. GMP reductase (1.7.1.7 from EC) catalyzes the irreversible and NADPH-dependent reductive deamination of GMP into IMP []. NADPH + guanosine 5-phosphate = NADP+ + inosine 5-phosphate + NH3 It converts nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and maintains intracellular balance of A and G nucleotides.; GO: 0003824 catalytic activity, 0055114 oxidation-reduction process; PDB: 3FFS_D 1VRD_A 1JCN_B 1EEP_B 3TSB_B 3USB_B 3TSD_A 4FF0_A 4FEZ_A 3KHJ_D ....
Probab=27.05 E-value=2e+02 Score=32.18 Aligned_cols=64 Identities=27% Similarity=0.439 Sum_probs=0.0
Q ss_pred HHHHHHHHHCCCCCcEEEEe--cCcCcCccCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcHHHHHHHHHHH
Q 046494 215 KEGLHSFLEGGCSPRFLVID--DGWQETINEFCKDGEPLIEGTQFAIRLVDIKENCKFNSSGSDNSCNDLHEFIDEIKEK 292 (724)
Q Consensus 215 ~~~l~~l~~~Gi~~~~viID--DGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n~KFP~~~~~~~~~GLk~lv~~Ik~~ 292 (724)
.+-++.|.+.|+. +++|| .|+. .-+...+++||++
T Consensus 110 ~er~~~L~~agvD--~ivID~a~g~s-----------------------------------------~~~~~~ik~ik~~ 146 (352)
T PF00478_consen 110 FERAEALVEAGVD--VIVIDSAHGHS-----------------------------------------EHVIDMIKKIKKK 146 (352)
T ss_dssp HHHHHHHHHTT-S--EEEEE-SSTTS-----------------------------------------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCC--EEEccccCccH-----------------------------------------HHHHHHHHHHHHh
Q ss_pred cC-CceEEeeeccccccCCCCCCchhhhhhhhccccccCCccccChhHHHHHHHHHHHHHhhcCCCEEEE
Q 046494 293 YG-LKYVYMWHALAGYWGGVLPSSDIMKKDIAMDSLEKYGVGIIDPQKIFDFYNDLHSYLANSGVDGVKV 361 (724)
Q Consensus 293 ~G-lk~vgvWhal~GYWgGi~P~s~~~~~d~~~~~~~~~G~g~v~p~da~~fy~~~~~~Las~GVD~VKv 361 (724)
++ +.-++ + .++.++.+. .|.++|+|+|||
T Consensus 147 ~~~~~via-----------------G---------------NV~T~e~a~--------~L~~aGad~vkV 176 (352)
T PF00478_consen 147 FPDVPVIA-----------------G---------------NVVTYEGAK--------DLIDAGADAVKV 176 (352)
T ss_dssp STTSEEEE-----------------E---------------EE-SHHHHH--------HHHHTT-SEEEE
T ss_pred CCCceEEe-----------------c---------------ccCCHHHHH--------HHHHcCCCEEEE
No 84
>cd04735 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 4. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=26.68 E-value=3.6e+02 Score=29.87 Aligned_cols=80 Identities=19% Similarity=0.268 Sum_probs=41.1
Q ss_pred CcHHHHHHHHHHHcCCc-eEEeeeccccccCCCCCCchhhhhhhhccccc---cCCc--cccChhHHHHHHHHH---HHH
Q 046494 280 NDLHEFIDEIKEKYGLK-YVYMWHALAGYWGGVLPSSDIMKKDIAMDSLE---KYGV--GIIDPQKIFDFYNDL---HSY 350 (724)
Q Consensus 280 ~GLk~lv~~Ik~~~Glk-~vgvWhal~GYWgGi~P~s~~~~~d~~~~~~~---~~G~--g~v~p~da~~fy~~~---~~~ 350 (724)
.+++.+++.||+ +|-+ .+=+||+ |.+.. +.......-++-..+. ..+. .-++.+++++.-++| .+.
T Consensus 78 ~~~~~l~~~vh~-~G~~i~~QL~h~--G~~~~--~~~~~~~~~~~ps~~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~ 152 (353)
T cd04735 78 PGLRKLAQAIKS-KGAKAILQIFHA--GRMAN--PALVPGGDVVSPSAIAAFRPGAHTPRELTHEEIEDIIDAFGEATRR 152 (353)
T ss_pred HHHHHHHHHHHh-CCCeEEEEecCC--CCCCC--ccccCCCceecCCCCcccCCCCCCCccCCHHHHHHHHHHHHHHHHH
Confidence 499999999999 7844 4567885 44321 1000000000000000 0000 012335555555555 345
Q ss_pred HhhcCCCEEEEccc
Q 046494 351 LANSGVDGVKVDVQ 364 (724)
Q Consensus 351 Las~GVD~VKvD~q 364 (724)
..++|+|+|-+-+-
T Consensus 153 a~~aGfDgVeih~a 166 (353)
T cd04735 153 AIEAGFDGVEIHGA 166 (353)
T ss_pred HHHcCCCEEEEccc
Confidence 67799999999763
No 85
>PRK05402 glycogen branching enzyme; Provisional
Probab=26.43 E-value=1.1e+03 Score=28.83 Aligned_cols=27 Identities=22% Similarity=0.396 Sum_probs=20.1
Q ss_pred hHHHHHHHHHHHHH-hhcCCCEEEEccc
Q 046494 338 QKIFDFYNDLHSYL-ANSGVDGVKVDVQ 364 (724)
Q Consensus 338 ~da~~fy~~~~~~L-as~GVD~VKvD~q 364 (724)
+.+++|.-+-..++ .+.||||+-+|+.
T Consensus 379 ~~v~~~l~~~~~~W~~e~~iDG~R~D~v 406 (726)
T PRK05402 379 NEVRNFLVANALYWLEEFHIDGLRVDAV 406 (726)
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEECCH
Confidence 45777766666665 5689999999974
No 86
>cd08560 GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodiesterase domain similar to Escherichia coli periplasmic phosphodiesterase (GlpQ) include uncharacterized proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and their hypothetical homologs. Members in this subfamily show high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=25.88 E-value=1.1e+02 Score=34.30 Aligned_cols=64 Identities=23% Similarity=0.281 Sum_probs=36.9
Q ss_pred HHHHHHHHHHcCCceEEeeeccccccCCCCCCchhhhhhhhccccccCCccc---cCh-hHHHHHHHHHHHHHhhcCCCE
Q 046494 283 HEFIDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKKDIAMDSLEKYGVGI---IDP-QKIFDFYNDLHSYLANSGVDG 358 (724)
Q Consensus 283 k~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~d~~~~~~~~~G~g~---v~p-~da~~fy~~~~~~Las~GVD~ 358 (724)
..+|+.+|+ .||+ |.+|.- ++.... +. ..|..+ -++ .....+++.+..++.+.||||
T Consensus 281 ~~~v~~Ah~-~GL~-V~~WTv--------r~~~~~------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvDG 341 (356)
T cd08560 281 SEYAKAAKA-AGLD-IITWTL--------ERSGPL------AS---GGGWYYQTIEDVINNDGDMYNVLDVLARDVGILG 341 (356)
T ss_pred HHHHHHHHH-cCCE-EEEEEe--------ecCccc------cc---CcccccccccccccccccHHHHHHHHHHhcCCCE
Confidence 678999999 8999 889953 111100 00 000000 011 123355555666667999999
Q ss_pred EEEcccc
Q 046494 359 VKVDVQS 365 (724)
Q Consensus 359 VKvD~q~ 365 (724)
|=.|+-.
T Consensus 342 vftD~p~ 348 (356)
T cd08560 342 IFSDWPA 348 (356)
T ss_pred EEccCCC
Confidence 9999854
No 87
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=25.74 E-value=9e+02 Score=26.74 Aligned_cols=118 Identities=16% Similarity=0.302 Sum_probs=66.4
Q ss_pred cCHHHHHHHHHHHHHCCCCCcEEEE----ecCcCcCccCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcH-H
Q 046494 209 VNPQGIKEGLHSFLEGGCSPRFLVI----DDGWQETINEFCKDGEPLIEGTQFAIRLVDIKENCKFNSSGSDNSCNDL-H 283 (724)
Q Consensus 209 vte~~I~~~l~~l~~~Gi~~~~viI----DDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n~KFP~~~~~~~~~GL-k 283 (724)
++-+.+++.++.+.+.||+ -|++ ++.--+..+ ++ .+. ++|+ .
T Consensus 58 ~s~d~l~~~~~~~~~lGi~--av~LFgvp~~~~Kd~~g------------s~------A~~-------------~~givq 104 (330)
T COG0113 58 YSLDRLVEEAEELVDLGIP--AVILFGVPDDSKKDETG------------SE------AYD-------------PDGIVQ 104 (330)
T ss_pred ccHHHHHHHHHHHHhcCCC--EEEEeCCCcccccCccc------------cc------ccC-------------CCChHH
Confidence 5678999999999999999 5444 221111000 00 011 1454 6
Q ss_pred HHHHHHHHHcCCceEEeeeccccccCCCCCCchhhhhhhhccccccCC-cc------ccChhHHHHHHHHHHHHHhhcCC
Q 046494 284 EFIDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKKDIAMDSLEKYG-VG------IIDPQKIFDFYNDLHSYLANSGV 356 (724)
Q Consensus 284 ~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~d~~~~~~~~~G-~g------~v~p~da~~fy~~~~~~Las~GV 356 (724)
..++.||+.++ + +++=- |.+++.++..| .| .|+.+..-+.|....-..|++|.
T Consensus 105 ravr~ik~~~p-~-l~iit------------------DvcLceyT~HGHcGil~~~~~V~ND~Tle~l~k~Avs~AeAGA 164 (330)
T COG0113 105 RAVRAIKEAFP-E-LVVIT------------------DVCLCEYTDHGHCGILDDGGYVDNDETLEILAKQAVSQAEAGA 164 (330)
T ss_pred HHHHHHHHhCC-C-eEEEe------------------eecccCCcCCCccccccCCCeecchHHHHHHHHHHHHHHHcCC
Confidence 77899998777 3 33321 22333333222 11 34344455566666666799999
Q ss_pred CEEEEccccchhhccCCCCChhhHHHHHHHHHHHH
Q 046494 357 DGVKVDVQSLMETLGSGYGGRVLLTRQYQQALEQS 391 (724)
Q Consensus 357 D~VKvD~q~~l~~l~~~~~g~~~l~~ay~~Al~~s 391 (724)
|.|-=-. + ..|+ ..+.++||+.+
T Consensus 165 divAPSd-----M----MDGr---V~aIR~aLd~a 187 (330)
T COG0113 165 DIVAPSD-----M----MDGR---VGAIREALDEA 187 (330)
T ss_pred Ceecccc-----c----ccch---HHHHHHHHHHc
Confidence 9885211 1 2355 56677888875
No 88
>PRK14836 undecaprenyl pyrophosphate synthase; Provisional
Probab=25.72 E-value=3e+02 Score=29.38 Aligned_cols=80 Identities=16% Similarity=0.243 Sum_probs=41.1
Q ss_pred CCCChhhHHHHHHHHHHHHHHhhCCCC-----ceEeeccCCCcccccccccceEeecCCCCCCCcchhhHHHHHHHHhhh
Q 046494 373 GYGGRVLLTRQYQQALEQSVAWNFKDN-----NLICCMSHNSYSLYSSMKSAVARASEDFMPGEPTFQTLHIASVAFNSL 447 (724)
Q Consensus 373 ~~~g~~~l~~ay~~Al~~s~~~~f~~~-----~iI~cMs~~~~~~~~~~~~~~~R~SdDf~p~~p~~~~~hi~~~a~nsl 447 (724)
.++||.+++++..+..++......... .+-.+|... . ...+--++|+|...--+ -.-+++++|.-+
T Consensus 141 ~YggR~EI~~A~k~l~~~~~~g~l~~~~i~e~~i~~~L~~~--~--~pdpDLlIRTsGE~RLS-----nFLlWQ~ayaEl 211 (253)
T PRK14836 141 SYGGRWDIVTAARALAREVAAGKLAPDEIDEALLAQHLALA--D--LPEPDLFIRTSGELRIS-----NFLLWQLAYTEL 211 (253)
T ss_pred cCCCHHHHHHHHHHHHHHHHhCCCChHhCCHHHHHHHhccC--C--CCCCCEEEEcCCccccc-----CChHHHHhheEE
Confidence 678888888887776654321111000 011112110 0 01233457888743221 112356678777
Q ss_pred hccCCCCCCccccc
Q 046494 448 LLGEIVVPDWDMFQ 461 (724)
Q Consensus 448 ~~g~~~~pDwDMf~ 461 (724)
+.-...|||.+...
T Consensus 212 yF~~~lWPdf~~~d 225 (253)
T PRK14836 212 YFTDTLWPDFDAQE 225 (253)
T ss_pred EeCCCCCCcCCHHH
Confidence 77778899987654
No 89
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=25.23 E-value=1.6e+02 Score=32.47 Aligned_cols=63 Identities=19% Similarity=0.375 Sum_probs=41.7
Q ss_pred CChhHHHHHHHHHHHHhcCcCCCccccccCcccccccccchhh-hhhccCHHHHHHHHHHHHHCCCC
Q 046494 162 DNPFELIKDSIKILEKHKGTFSHLENKKIPRHLDWFGWCTWDA-FYKQVNPQGIKEGLHSFLEGGCS 227 (724)
Q Consensus 162 ~dp~~~i~~A~~~~~~~~~tf~~~~~k~~P~~~~~~GWcTW~a-f~~~vte~~I~~~l~~l~~~Gi~ 227 (724)
.+||++++++++..++.+..... ..+.+| |+..|-. +|-. .+...+++.|+++++++.+.|+.
T Consensus 242 ~~PY~~v~~~~~~~~~~~~~~~~-~~~~RP-WlQ~Ft~-~~~~~~~~~Yg~~ev~aQI~A~~d~g~~ 305 (316)
T PF13200_consen 242 LEPYEIVYRSLKRAKERLRGLEG-PAIIRP-WLQDFTA-SWLGKNYKEYGPEEVRAQIQALKDAGIE 305 (316)
T ss_pred cChHHHHHHHHHHHHHHhhcCCC-CCeEec-ccccccc-cccccCccccCHHHHHHHHHHHHHcCCC
Confidence 57999999999887776543211 122333 4433322 3322 25578899999999999999986
No 90
>cd08213 RuBisCO_large_III Ribulose bisphosphate carboxylase large chain, Form III. Ribulose bisphosphate carboxylase (Rubisco) plays an important role in the Calvin reductive pentose phosphate pathway. It catalyzes the primary CO2 fixation step. Rubisco is activated by carbamylation of an active site lysine, stabilized by a divalent cation, which then catalyzes the proton abstraction from the substrate ribulose 1,5 bisphosphate (RuBP) and leads to the formation of two molecules of 3-phosphoglycerate. Members of the Rubisco family can be divided into 4 subgroups, Form I-IV , which differ in their taxonomic distribution and subunit composition. Form III is only found in archaea and forms large subunit oligomers (dimers or decamers) that do not include small subunits.
Probab=24.92 E-value=2.3e+02 Score=32.46 Aligned_cols=51 Identities=16% Similarity=0.025 Sum_probs=30.0
Q ss_pred HHhhcCCCEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeecc
Q 046494 350 YLANSGVDGVKVDVQSLMETLGSGYGGRVLLTRQYQQALEQSVAWNFKDNNLICCMS 406 (724)
Q Consensus 350 ~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cMs 406 (724)
.++.-|||++|=|=.-.... +..-.+-.++..+|++++-.+ +|+..++.+.
T Consensus 155 ~~~~GGvD~iKDDE~l~~q~----~~p~~~Rv~~~~~a~~~a~~e--TG~~~~y~~N 205 (412)
T cd08213 155 EALVGGVDLVKDDENLTSQP----FNRFEERAKESLKARDKAEAE--TGERKAYLAN 205 (412)
T ss_pred HHHhcCCcccccCccCCCCC----CCCHHHHHHHHHHHHHHHHHh--hCCcceEEEE
Confidence 35778999999994321111 112234466677777776555 5666666544
No 91
>PF07643 DUF1598: Protein of unknown function (DUF1598); InterPro: IPR011487 This is a family of Rhodopirellula baltica hypothetical proteins of about 500 amino acids in length.
Probab=24.68 E-value=1.1e+02 Score=27.17 Aligned_cols=40 Identities=18% Similarity=0.427 Sum_probs=30.2
Q ss_pred CcHHHHHHHHHHHcCCceEEeeeccccccCCCCCCch----hhhhhhhcccc
Q 046494 280 NDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLPSSD----IMKKDIAMDSL 327 (724)
Q Consensus 280 ~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~----~~~~d~~~~~~ 327 (724)
.|.+..++.+++++|.+.|-|| ||.+++. .++.|+.++.+
T Consensus 27 ~~~~~~~~~l~~~LG~QdV~V~--------Gip~~sh~ArvLVeADyrMKrI 70 (84)
T PF07643_consen 27 AGPAAWVDGLRQALGPQDVTVY--------GIPADSHFARVLVEADYRMKRI 70 (84)
T ss_pred cCHHHHHHHHHHHhCCceeEEE--------ccCCccHHHHHHHHhhhHHHHh
Confidence 6888899999999999999886 7888872 22336666544
No 92
>PRK05628 coproporphyrinogen III oxidase; Validated
Probab=24.62 E-value=5.5e+02 Score=28.50 Aligned_cols=109 Identities=17% Similarity=0.167 Sum_probs=65.2
Q ss_pred hhhccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcHHH
Q 046494 205 FYKQVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKENCKFNSSGSDNSCNDLHE 284 (724)
Q Consensus 205 f~~~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n~KFP~~~~~~~~~GLk~ 284 (724)
+....+.+.++++++.+++.|++ .+.+|== -+ +| ......++.
T Consensus 137 l~R~~s~~~~~~a~~~l~~~g~~--~v~~dli----~G---------------------------lP----gqt~~~~~~ 179 (375)
T PRK05628 137 LDRTHTPGRAVAAAREARAAGFE--HVNLDLI----YG---------------------------TP----GESDDDWRA 179 (375)
T ss_pred cCCCCCHHHHHHHHHHHHHcCCC--cEEEEEe----cc---------------------------CC----CCCHHHHHH
Confidence 34456778888888888888876 3333310 00 11 001136677
Q ss_pred HHHHHHHHcCCceEEeeeccccccCCCCCCchhhhhhhhccccccCCccccChhHHHHHHHHHHHHHhhcCCCEEEEcc
Q 046494 285 FIDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKKDIAMDSLEKYGVGIIDPQKIFDFYNDLHSYLANSGVDGVKVDV 363 (724)
Q Consensus 285 lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~d~~~~~~~~~G~g~v~p~da~~fy~~~~~~Las~GVD~VKvD~ 363 (724)
.++.+.+ +|.+++.+.. +. +.|+++..+. ...+++...+.+...++|....+.|.+.|.....+++
T Consensus 180 tl~~~~~-l~~~~i~~y~-l~-----~~~gT~l~~~------~~~g~~~~~~~~~~~~~~~~~~~~l~~~G~~~ye~s~ 245 (375)
T PRK05628 180 SLDAALE-AGVDHVSAYA-LI-----VEDGTALARR------VRRGELPAPDDDVLADRYELADARLSAAGFDWYEVSN 245 (375)
T ss_pred HHHHHHh-cCCCEEEeee-ee-----cCCCChHHHH------hhcCCCCCCChHHHHHHHHHHHHHHHHcCCCeeeecc
Confidence 7777777 8888776532 32 4566644221 1122222333345667888899999999999887765
No 93
>PF14307 Glyco_tran_WbsX: Glycosyltransferase WbsX
Probab=24.43 E-value=9e+02 Score=26.66 Aligned_cols=145 Identities=12% Similarity=0.234 Sum_probs=83.9
Q ss_pred hhhhccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcHH
Q 046494 204 AFYKQVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKENCKFNSSGSDNSCNDLH 283 (724)
Q Consensus 204 af~~~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n~KFP~~~~~~~~~GLk 283 (724)
.||-.-+++.+.++++.+++.||. .++++=-|+... +|. + +
T Consensus 50 GyYdl~~p~v~~~Q~~lA~~~GI~--gF~~~~Ywf~gk------------------~lL--e-----------------~ 90 (345)
T PF14307_consen 50 GYYDLRDPEVMEKQAELAKEYGID--GFCFYHYWFNGK------------------RLL--E-----------------K 90 (345)
T ss_pred CcccCCCHHHHHHHHHHHHHhCCC--EEEEEeeecCCc------------------hHH--H-----------------H
Confidence 356566889999999999999999 999999999322 121 1 1
Q ss_pred HHHHHHHH--HcCCceEEee--eccccccCCCCCCchhhhhhhhccccccCCccccChhHHHHHHHHHHHHHhhcCCCEE
Q 046494 284 EFIDEIKE--KYGLKYVYMW--HALAGYWGGVLPSSDIMKKDIAMDSLEKYGVGIIDPQKIFDFYNDLHSYLANSGVDGV 359 (724)
Q Consensus 284 ~lv~~Ik~--~~Glk~vgvW--hal~GYWgGi~P~s~~~~~d~~~~~~~~~G~g~v~p~da~~fy~~~~~~Las~GVD~V 359 (724)
++ +.+.+ +..+++.-+| |.....|.|.... .++++ .+.+.+|..+|++.+..++++- -|+
T Consensus 91 p~-~~~l~~~~~d~pFcl~WAN~~w~~~w~g~~~~-~l~~q------------~y~~~~d~~~~~~~l~~~F~D~--rYi 154 (345)
T PF14307_consen 91 PL-ENLLASKEPDFPFCLCWANENWTRRWDGRNNE-ILIEQ------------KYSGEDDWKEHFRYLLPYFKDP--RYI 154 (345)
T ss_pred HH-HHHHhcCCCCCcEEEEECCChhhhccCCCCcc-ccccc------------cCCchhHHHHHHHHHHHHhCCC--Cce
Confidence 22 22222 2347766777 5555567665221 12111 1233466778888888888765 489
Q ss_pred EEccccchhhccCCCCChhhHHHHHHHHHHHHHHhh-CCCCceEeecc
Q 046494 360 KVDVQSLMETLGSGYGGRVLLTRQYQQALEQSVAWN-FKDNNLICCMS 406 (724)
Q Consensus 360 KvD~q~~l~~l~~~~~g~~~l~~ay~~Al~~s~~~~-f~~~~iI~cMs 406 (724)
|||..-.+-....+ .....+.+.+.|.+.++++ +++--+|.+..
T Consensus 155 kVdGKPv~~Iy~p~---~~pd~~~~~~~wr~~a~~~G~~giyii~~~~ 199 (345)
T PF14307_consen 155 KVDGKPVFLIYRPG---DIPDIKEMIERWREEAKEAGLPGIYIIAVQG 199 (345)
T ss_pred eECCEEEEEEECcc---cccCHHHHHHHHHHHHHHcCCCceEEEEEec
Confidence 99997654333211 1122444555555444443 33333555544
No 94
>cd08209 RLP_DK-MTP-1-P-enolase 2,3-diketo-5-methylthiopentyl-1-phosphate enolase. Ribulose bisphosphate carboxylase like proteins (RLPs) similar to B. subtilis YkrW protein, have been identified as 2,3-diketo-5-methylthiopentyl-1-phosphate enolases. They catalyze the tautomerization of 2,3-diketo-5-methylthiopentane 1-phosphate (DK-MTP 1-P). This is an important step in the methionine salvage pathway in which 5-methylthio-D-ribose (MTR) derived from 5'-methylthioadenosine is converted to methionine.
Probab=24.29 E-value=2.3e+02 Score=32.28 Aligned_cols=51 Identities=16% Similarity=0.102 Sum_probs=29.9
Q ss_pred HHhhcCCCEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeecc
Q 046494 350 YLANSGVDGVKVDVQSLMETLGSGYGGRVLLTRQYQQALEQSVAWNFKDNNLICCMS 406 (724)
Q Consensus 350 ~Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cMs 406 (724)
.++.-|||+||=|=.-.-.. +..-.+-.++..+|++++-.+ +|+..++..-
T Consensus 148 ~~~~GGvD~IKDDE~l~~q~----~~p~~eRv~a~~~a~~~a~~e--TG~~~~ya~N 198 (391)
T cd08209 148 EQALGGVDLIKDDEILFDNP----LAPALERIRACRPVLQEVYEQ--TGRRTLYAVN 198 (391)
T ss_pred HHHhCCCCcccccccCCCCC----CCCHHHHHHHHHHHHHHHHHh--hCCcceEEEE
Confidence 45788999999984321111 112234466677777776555 5665555443
No 95
>PRK12313 glycogen branching enzyme; Provisional
Probab=24.08 E-value=1.1e+03 Score=28.32 Aligned_cols=28 Identities=21% Similarity=0.361 Sum_probs=20.7
Q ss_pred hHHHHHHHHHHHHH-hhcCCCEEEEcccc
Q 046494 338 QKIFDFYNDLHSYL-ANSGVDGVKVDVQS 365 (724)
Q Consensus 338 ~da~~fy~~~~~~L-as~GVD~VKvD~q~ 365 (724)
+.+++|.-+...++ .+.||||+-+|+..
T Consensus 284 ~~vr~~l~~~~~~W~~~~~iDG~R~D~~~ 312 (633)
T PRK12313 284 NEVRSFLISSALFWLDEYHLDGLRVDAVS 312 (633)
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEcChh
Confidence 46777766666666 56899999999653
No 96
>cd04733 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 2. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=24.07 E-value=3e+02 Score=30.20 Aligned_cols=23 Identities=17% Similarity=0.315 Sum_probs=18.3
Q ss_pred CcHHHHHHHHHHHcCCc-eEEeeec
Q 046494 280 NDLHEFIDEIKEKYGLK-YVYMWHA 303 (724)
Q Consensus 280 ~GLk~lv~~Ik~~~Glk-~vgvWha 303 (724)
.|++.+++.+|+ +|-+ .+=+||+
T Consensus 82 ~~~~~l~~~vh~-~G~~~~~Ql~h~ 105 (338)
T cd04733 82 EAFREWAAAAKA-NGALIWAQLNHP 105 (338)
T ss_pred HHHHHHHHHHHh-cCCEEEEEccCC
Confidence 399999999999 8966 4456884
No 97
>cd02877 GH18_hevamine_XipI_class_III This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain. Hevamine is a class III endochitinase that hydrolyzes the linear polysaccharide chains of chitin and peptidoglycan and is important for defense against pathogenic bacteria and fungi. PPL2 (Parkia platycephala lectin 2) is a class III chitinase from Parkia platycephala seeds that hydrolyzes beta(1-4) glycosidic bonds linking 2-acetoamido-2-deoxy-beta-D-glucopyranose units in chitin.
Probab=24.05 E-value=5.1e+02 Score=27.95 Aligned_cols=61 Identities=23% Similarity=0.262 Sum_probs=37.7
Q ss_pred CcHHHHHHHHHHHcCCceEEeeeccccccCCCCCCchhhhhhhhccccccCCccccChhHHHHHHHHHHH----------
Q 046494 280 NDLHEFIDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKKDIAMDSLEKYGVGIIDPQKIFDFYNDLHS---------- 349 (724)
Q Consensus 280 ~GLk~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~d~~~~~~~~~G~g~v~p~da~~fy~~~~~---------- 349 (724)
..|.+-|+..++ .|+| | -.++.|..++... -+++++..|-+.+..
T Consensus 59 ~~~~~dI~~cq~-~G~K-V--lLSIGG~~~~~~~---------------------~s~~~a~~Fa~~l~~~~~~~~~~~~ 113 (280)
T cd02877 59 PQLGADIKHCQS-KGKK-V--LLSIGGAGGSYSL---------------------SSDADAKDFADYLWNAFGGGTDSGV 113 (280)
T ss_pred hhHHHHHHHHHH-CCCE-E--EEEccCCCCCcCC---------------------CCHHHHHHHHHHHHHHhCCcccccc
Confidence 368888888888 6898 3 3577554333221 123445555554433
Q ss_pred --HHhhcCCCEEEEcccc
Q 046494 350 --YLANSGVDGVKVDVQS 365 (724)
Q Consensus 350 --~Las~GVD~VKvD~q~ 365 (724)
.+.++++|+|-+|+..
T Consensus 114 ~rp~g~~~lDGiD~D~E~ 131 (280)
T cd02877 114 PRPFGDAVVDGFDFDIEH 131 (280)
T ss_pred ccccccccccceEEeccc
Confidence 3447889999999865
No 98
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=23.66 E-value=3.8e+02 Score=26.59 Aligned_cols=30 Identities=20% Similarity=0.445 Sum_probs=25.7
Q ss_pred chhhhhhccCHHHHHHHHHHHHHCCCCCcEEEE
Q 046494 201 TWDAFYKQVNPQGIKEGLHSFLEGGCSPRFLVI 233 (724)
Q Consensus 201 TW~af~~~vte~~I~~~l~~l~~~Gi~~~~viI 233 (724)
.|+. .++.+++.=.+-++.|++.|+. +|||
T Consensus 10 ~~d~-~~~~~~~~W~~~~~~m~~~Gid--tlIl 39 (166)
T PF14488_consen 10 SWDI-HQNWTPAQWREEFRAMKAIGID--TLIL 39 (166)
T ss_pred cchh-hcCCCHHHHHHHHHHHHHcCCc--EEEE
Confidence 4555 6899999999999999999998 7765
No 99
>PRK14827 undecaprenyl pyrophosphate synthase; Provisional
Probab=23.30 E-value=1.5e+02 Score=32.43 Aligned_cols=80 Identities=15% Similarity=0.247 Sum_probs=39.8
Q ss_pred CCCChhhHHHHHHHHHHHHHHhhCCCC-----ceEeeccCCCcccccccccceEeecCCCCCCCcchhhHHHHHHHHhhh
Q 046494 373 GYGGRVLLTRQYQQALEQSVAWNFKDN-----NLICCMSHNSYSLYSSMKSAVARASEDFMPGEPTFQTLHIASVAFNSL 447 (724)
Q Consensus 373 ~~~g~~~l~~ay~~Al~~s~~~~f~~~-----~iI~cMs~~~~~~~~~~~~~~~R~SdDf~p~~p~~~~~hi~~~a~nsl 447 (724)
.++|+.++.+|.++..+.......... .+-.+|... + ....-.++|+|+..--+ -...++.+|.-+
T Consensus 194 ~YgGR~EI~~A~~~i~~~v~~g~l~~~~I~e~~i~~~L~t~-~---~PdpDLlIRTsGE~RLS-----nFLLWQ~ayaEl 264 (296)
T PRK14827 194 NYGGRTEITEATREIAREAAAGRLNPERITESTIARHLQRP-D---IPDVDLFLRTSGEQRSS-----NFMLWQAAYAEY 264 (296)
T ss_pred cCCCHHHHHHHHHHHHHHHHcCCCChhhccHHHHHHHhccC-C---CCCCCEEEecCCccccc-----CchHhhhhheEE
Confidence 577788887777766554321111100 011111110 0 01223456887733211 122466778777
Q ss_pred hccCCCCCCccccc
Q 046494 448 LLGEIVVPDWDMFQ 461 (724)
Q Consensus 448 ~~g~~~~pDwDMf~ 461 (724)
+.-...|||.+-.+
T Consensus 265 ~F~d~lWPdF~~~d 278 (296)
T PRK14827 265 IFQDKLWPDYDRRD 278 (296)
T ss_pred EecCCCCccCCHHH
Confidence 76677899977544
No 100
>PRK14839 undecaprenyl pyrophosphate synthase; Provisional
Probab=22.87 E-value=4.5e+02 Score=27.94 Aligned_cols=18 Identities=6% Similarity=0.397 Sum_probs=12.6
Q ss_pred HHHHHHHHHHcCCceEEee
Q 046494 283 HEFIDEIKEKYGLKYVYMW 301 (724)
Q Consensus 283 k~lv~~Ik~~~Glk~vgvW 301 (724)
+.+++...+ +|||++.+|
T Consensus 43 ~~i~~~c~~-~GI~~lTvY 60 (239)
T PRK14839 43 RRVVEAAPD-LGIGTLTLY 60 (239)
T ss_pred HHHHHHHHH-cCCCEEEEE
Confidence 444555555 899998886
No 101
>PRK14830 undecaprenyl pyrophosphate synthase; Provisional
Probab=22.21 E-value=6.6e+02 Score=26.81 Aligned_cols=81 Identities=12% Similarity=0.259 Sum_probs=41.2
Q ss_pred CCCCChhhHHHHHHHHHHHHHHhhCCCCc-----eEeeccCCCcccccccccceEeecCCCCCCCcchhhHHHHHHHHhh
Q 046494 372 SGYGGRVLLTRQYQQALEQSVAWNFKDNN-----LICCMSHNSYSLYSSMKSAVARASEDFMPGEPTFQTLHIASVAFNS 446 (724)
Q Consensus 372 ~~~~g~~~l~~ay~~Al~~s~~~~f~~~~-----iI~cMs~~~~~~~~~~~~~~~R~SdDf~p~~p~~~~~hi~~~a~ns 446 (724)
-.++||-++.+|.++.++........... +-.+|... + .+.+--++|+|..---+ -...++++|.-
T Consensus 148 ~~YggR~EI~~A~~~~~~~v~~g~l~~~~I~e~~i~~~L~~~-~---~pdpDLlIRTsGe~RLS-----nFLlWQ~ayaE 218 (251)
T PRK14830 148 LNYGGRAEIVSAVKEIAKDVLDGKLNPEDITEELISNYLMTK-G---LPDPDLLIRTSGELRLS-----NFLLWQLAYSE 218 (251)
T ss_pred ecCCCHHHHHHHHHHHHHHHHcCCCChHhCCHHHHHHHhCcC-C---CCCCCEEEeCCCCCccc-----CChHHHHcceE
Confidence 36788888888887777653211110000 00111100 0 01233456887733211 12236677877
Q ss_pred hhccCCCCCCccccc
Q 046494 447 LLLGEIVVPDWDMFQ 461 (724)
Q Consensus 447 l~~g~~~~pDwDMf~ 461 (724)
++.-...|||....+
T Consensus 219 l~F~~~lWPdf~~~d 233 (251)
T PRK14830 219 FYFTDVLWPDFDEEE 233 (251)
T ss_pred EEECCCCCCcCCHHH
Confidence 777777899976544
No 102
>COG0071 IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]
Probab=22.11 E-value=2e+02 Score=27.60 Aligned_cols=34 Identities=32% Similarity=0.468 Sum_probs=24.2
Q ss_pred eEEEecCCCceEeecCeeeeeEEeCCCcEEEEEcCC
Q 046494 678 FGAYSSSKPKCCMVDTKEEEFTYNAEDGLLTVKLPG 713 (724)
Q Consensus 678 ~g~YsS~~P~~~~vdg~~~~f~y~~~~glltv~lp~ 713 (724)
.|-|.-.-+--..|+-..+..+|.. |+|+|.||-
T Consensus 99 ~~~f~r~~~Lp~~v~~~~~~A~~~n--GvL~I~lpk 132 (146)
T COG0071 99 YGEFERTFRLPEKVDPEVIKAKYKN--GLLTVTLPK 132 (146)
T ss_pred eeeEEEEEECcccccccceeeEeeC--cEEEEEEec
Confidence 4555444444456776678889987 999999985
No 103
>cd02929 TMADH_HD_FMN Trimethylamine dehydrogenase (TMADH) and histamine dehydrogenase (HD) FMN-binding domain. TMADH is an iron-sulfur flavoprotein that catalyzes the oxidative demethylation of trimethylamine to form dimethylamine and formaldehyde. The protein forms a symetrical dimer with each subunit containing one 4Fe-4S cluster and one FMN cofactor. It contains a unique flavin, in the form of a 6-S-cysteinyl FMN which is bent by ~25 degrees along the N5-N10 axis of the flavin isoalloxazine ring. This modification of the conformation of the flavin is thought to facilitate catalysis.The closely related histamine dehydrogenase catalyzes oxidative deamination of histamine.
Probab=21.78 E-value=9.3e+02 Score=26.93 Aligned_cols=80 Identities=16% Similarity=0.148 Sum_probs=41.7
Q ss_pred CcHHHHHHHHHHHcCCc-eEEeeeccccccCCC-----CCCchhhhhhhhccccccCC-c-cccChhHHHHHHHHH---H
Q 046494 280 NDLHEFIDEIKEKYGLK-YVYMWHALAGYWGGV-----LPSSDIMKKDIAMDSLEKYG-V-GIIDPQKIFDFYNDL---H 348 (724)
Q Consensus 280 ~GLk~lv~~Ik~~~Glk-~vgvWhal~GYWgGi-----~P~s~~~~~d~~~~~~~~~G-~-g~v~p~da~~fy~~~---~ 348 (724)
.|++.+++.||+ +|-| .+=+||+ |.+.-- .|-++. .+........+ . .-++.+++.+.-++| .
T Consensus 83 ~~~~~l~~~vh~-~G~~i~~QL~H~--G~~~~~~~~~~~~~~ps---~~~~~~~~~~~~~p~~mt~~eI~~ii~~f~~AA 156 (370)
T cd02929 83 RNLAAMTDAVHK-HGALAGIELWHG--GAHAPNRESRETPLGPS---QLPSEFPTGGPVQAREMDKDDIKRVRRWYVDAA 156 (370)
T ss_pred HHHHHHHHHHHH-CCCeEEEecccC--CCCCCccCCCCCccCCC---CCCCCccccCCCCCccCCHHHHHHHHHHHHHHH
Confidence 499999999999 7855 4567886 432210 000000 00000000000 0 012335666665555 3
Q ss_pred HHHhhcCCCEEEEcccc
Q 046494 349 SYLANSGVDGVKVDVQS 365 (724)
Q Consensus 349 ~~Las~GVD~VKvD~q~ 365 (724)
+...++|+|+|-+-+-+
T Consensus 157 ~ra~~aGfDgVEih~ah 173 (370)
T cd02929 157 LRARDAGFDIVYVYAAH 173 (370)
T ss_pred HHHHHcCCCEEEEcccc
Confidence 45577999999997643
No 104
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.34 E-value=1.1e+03 Score=27.17 Aligned_cols=134 Identities=20% Similarity=0.255 Sum_probs=74.6
Q ss_pred ccCHHHHHHHHHHHHHCCCCCcEEEE-ecCcCcCccCCCCCCCCccccccccccccccccCC-CCCCCCCCCCCCcHHHH
Q 046494 208 QVNPQGIKEGLHSFLEGGCSPRFLVI-DDGWQETINEFCKDGEPLIEGTQFAIRLVDIKENC-KFNSSGSDNSCNDLHEF 285 (724)
Q Consensus 208 ~vte~~I~~~l~~l~~~Gi~~~~viI-DDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n~-KFP~~~~~~~~~GLk~l 285 (724)
-.+++++.+.++.|...|+..-|+.+ =||--- ++ +.+. .+..+. .+... ..+-+=|+.+
T Consensus 60 ~~~~~el~~~ld~l~~ln~NTv~~qV~~~G~~l------yp-------S~~~----p~s~~~~~~~~~--~~g~DpLa~~ 120 (418)
T COG1649 60 LFQRQELKDILDDLQKLNFNTVYPQVWNDGDAL------YP-------SAVL----PWSDGLPGVLGV--DPGYDPLAFV 120 (418)
T ss_pred cccHHHHHHHHHHHHHcCCceeEEEEecCcccc------cc-------cccc----ccccCcCcccCC--CCCCChHHHH
Confidence 46889999999999999999666554 222111 10 0111 111110 10000 1111347888
Q ss_pred HHHHHHHcCCceEEeeeccccccCCCCC-Cchhhhh--hhhccc------cccCC---ccccCh--hHHHHHHHHHHHHH
Q 046494 286 IDEIKEKYGLKYVYMWHALAGYWGGVLP-SSDIMKK--DIAMDS------LEKYG---VGIIDP--QKIFDFYNDLHSYL 351 (724)
Q Consensus 286 v~~Ik~~~Glk~vgvWhal~GYWgGi~P-~s~~~~~--d~~~~~------~~~~G---~g~v~p--~da~~fy~~~~~~L 351 (724)
|++.|+ -||+ |--|..... +.| .|++.+. ++.... ....| ..++|| .++++|+.++.--+
T Consensus 121 I~~AHk-r~l~-v~aWf~~~~----~a~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ldPg~Pevq~~i~~lv~ev 194 (418)
T COG1649 121 IAEAHK-RGLE-VHAWFNPYR----MAPPTSPLTKRHPHWLTTKRPGWVYVRHQGWGKRVWLDPGIPEVQDFITSLVVEV 194 (418)
T ss_pred HHHHHh-cCCe-eeechhhcc----cCCCCChhHhhCCCCcccCCCCeEEEecCCceeeeEeCCCChHHHHHHHHHHHHH
Confidence 888898 5999 878887632 333 3333221 111110 01122 234565 57899987776555
Q ss_pred -hhcCCCEEEEccccc
Q 046494 352 -ANSGVDGVKVDVQSL 366 (724)
Q Consensus 352 -as~GVD~VKvD~q~~ 366 (724)
...-||++-.|--..
T Consensus 195 V~~YdvDGIQfDd~fy 210 (418)
T COG1649 195 VRNYDVDGIQFDDYFY 210 (418)
T ss_pred HhCCCCCceecceeec
Confidence 678999999998654
No 105
>PLN02784 alpha-amylase
Probab=21.30 E-value=9.2e+02 Score=30.46 Aligned_cols=79 Identities=15% Similarity=0.221 Sum_probs=45.8
Q ss_pred ccccccccchhhhhhccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCccccccccccccccccCCCCCC
Q 046494 193 HLDWFGWCTWDAFYKQVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKENCKFNS 272 (724)
Q Consensus 193 ~~~~~GWcTW~af~~~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n~KFP~ 272 (724)
++.+|=|.+|.. ..--.+|.+.++.|++.|+. .|-|==-.++... .|++. ..+ +.-|.+|-.
T Consensus 505 mlQgF~Wds~~d---g~w~~~I~ekldyL~~LG~t--aIWLpP~~~s~s~----------~GY~p-~D~--y~lds~yGT 566 (894)
T PLN02784 505 LCQGFNWESHKS---GRWYMELGEKAAELSSLGFT--VVWLPPPTESVSP----------EGYMP-KDL--YNLNSRYGT 566 (894)
T ss_pred EEEeEEcCcCCC---CchHHHHHHHHHHHHHhCCC--EEEeCCCCCCCCC----------CCcCc-ccc--cccCcCcCC
Confidence 456677776653 12257888999999999987 3322111111110 11211 112 123566653
Q ss_pred CCCCCCCCcHHHHHHHHHHHcCCc
Q 046494 273 SGSDNSCNDLHEFIDEIKEKYGLK 296 (724)
Q Consensus 273 ~~~~~~~~GLk~lv~~Ik~~~Glk 296 (724)
. ..|+.+|+.+|+ .||+
T Consensus 567 ~------~ELk~LI~a~H~-~GIk 583 (894)
T PLN02784 567 I------DELKDLVKSFHE-VGIK 583 (894)
T ss_pred H------HHHHHHHHHHHH-CCCE
Confidence 2 589999999999 7998
No 106
>PRK07379 coproporphyrinogen III oxidase; Provisional
Probab=21.08 E-value=7.1e+02 Score=28.09 Aligned_cols=110 Identities=9% Similarity=0.115 Sum_probs=67.7
Q ss_pred hhhhccCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcHH
Q 046494 204 AFYKQVNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKENCKFNSSGSDNSCNDLH 283 (724)
Q Consensus 204 af~~~vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n~KFP~~~~~~~~~GLk 283 (724)
.++...+.+.+.++++.+++.|++ .+.||= .-+ +| ......++
T Consensus 143 ~l~R~~~~~~~~~ai~~l~~~G~~--~v~~dl----I~G---------------------------lP----gqt~e~~~ 185 (400)
T PRK07379 143 LCGRSHRVKDIFAAVDLIHQAGIE--NFSLDL----ISG---------------------------LP----HQTLEDWQ 185 (400)
T ss_pred HhCCCCCHHHHHHHHHHHHHcCCC--eEEEEe----ecC---------------------------CC----CCCHHHHH
Confidence 345568888888888888888877 333321 000 11 00113566
Q ss_pred HHHHHHHHHcCCceEEeeeccccccCCCCCCchhhhhhhhccccccCCccccChhHHHHHHHHHHHHHhhcCCCEEEEcc
Q 046494 284 EFIDEIKEKYGLKYVYMWHALAGYWGGVLPSSDIMKKDIAMDSLEKYGVGIIDPQKIFDFYNDLHSYLANSGVDGVKVDV 363 (724)
Q Consensus 284 ~lv~~Ik~~~Glk~vgvWhal~GYWgGi~P~s~~~~~d~~~~~~~~~G~g~v~p~da~~fy~~~~~~Las~GVD~VKvD~ 363 (724)
..++.+.+ ++..++.+. .+. +.|+++..+. ...+...+.+.++..++|......|.+.|..=.-+++
T Consensus 186 ~tl~~~~~-l~p~~is~y-~L~-----~~pgT~l~~~------~~~g~~~~~~~~~~~~~~~~~~~~L~~~Gy~~yeisn 252 (400)
T PRK07379 186 ASLEAAIA-LNPTHLSCY-DLV-----LEPGTAFGKQ------YQPGKAPLPSDETTAAMYRLAQEILTQAGYEHYEISN 252 (400)
T ss_pred HHHHHHHc-CCCCEEEEe-cce-----ecCCchhHHH------hhcCCCCCCCHHHHHHHHHHHHHHHHHcCCceeeeeh
Confidence 67777777 888888765 332 4566543221 1111123445567778999999999999988777665
No 107
>PLN02803 beta-amylase
Probab=21.01 E-value=2.2e+02 Score=33.64 Aligned_cols=57 Identities=19% Similarity=0.352 Sum_probs=44.1
Q ss_pred cCHHHHHHHHHHHHHCCCCCcEEEEecCcCcCccCCCCCCCCccccccccccccccccCCCCCCCCCCCCCCcHHHHHHH
Q 046494 209 VNPQGIKEGLHSFLEGGCSPRFLVIDDGWQETINEFCKDGEPLIEGTQFAIRLVDIKENCKFNSSGSDNSCNDLHEFIDE 288 (724)
Q Consensus 209 vte~~I~~~l~~l~~~Gi~~~~viIDDGWQ~~~~d~~~~~~~~~~~~~~~~~L~~~~~n~KFP~~~~~~~~~GLk~lv~~ 288 (724)
.+++.+.+.|++|+..|+. =|.||=.|--+.+++. .+|- | +|-+.+++-
T Consensus 104 ~~~~~l~~~L~~LK~~GVd--GVmvDVWWGiVE~~~p----------------------~~Yd--W-----sgY~~l~~m 152 (548)
T PLN02803 104 NKPRAMNASLMALRSAGVE--GVMVDAWWGLVEKDGP----------------------MKYN--W-----EGYAELVQM 152 (548)
T ss_pred cCHHHHHHHHHHHHHcCCC--EEEEEeeeeeeccCCC----------------------CcCC--c-----HHHHHHHHH
Confidence 3678899999999999988 9999988887765422 1111 1 488999999
Q ss_pred HHHHcCCce
Q 046494 289 IKEKYGLKY 297 (724)
Q Consensus 289 Ik~~~Glk~ 297 (724)
||+ .|||.
T Consensus 153 vr~-~GLKl 160 (548)
T PLN02803 153 VQK-HGLKL 160 (548)
T ss_pred HHH-cCCeE
Confidence 998 89883
No 108
>PRK04208 rbcL ribulose bisophosphate carboxylase; Reviewed
Probab=20.92 E-value=3.2e+02 Score=31.89 Aligned_cols=49 Identities=12% Similarity=-0.052 Sum_probs=27.6
Q ss_pred HhhcCCCEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCceEeec
Q 046494 351 LANSGVDGVKVDVQSLMETLGSGYGGRVLLTRQYQQALEQSVAWNFKDNNLICCM 405 (724)
Q Consensus 351 Las~GVD~VKvD~q~~l~~l~~~~~g~~~l~~ay~~Al~~s~~~~f~~~~iI~cM 405 (724)
++.-|||++|=|=.-....+ ..-.+-.++..+|+.++-.+ +|+..++.+
T Consensus 185 ~~~GGvD~IKDDE~l~~q~f----~p~~~Rv~~~~~a~~~a~~e--TG~~k~y~~ 233 (468)
T PRK04208 185 ALRGGLDFTKDDENLNSQPF----NRWRDRFLFVMEAIDKAEAE--TGERKGHYL 233 (468)
T ss_pred HHhcCCceeeCCCCCCCCCC----ccHHHHHHHHHHHHHHHHHh--hCCcceEEE
Confidence 56789999999943211111 12223455666777765444 555555543
No 109
>cd04747 OYE_like_5_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 5. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=20.70 E-value=7.5e+02 Score=27.73 Aligned_cols=80 Identities=19% Similarity=0.266 Sum_probs=41.8
Q ss_pred cHHHHHHHHHHHcCCc-eEEeeeccccccCCC-C-CCchhhhhhhhccccccCCcc---ccChhHHHHHHHHHH---HHH
Q 046494 281 DLHEFIDEIKEKYGLK-YVYMWHALAGYWGGV-L-PSSDIMKKDIAMDSLEKYGVG---IIDPQKIFDFYNDLH---SYL 351 (724)
Q Consensus 281 GLk~lv~~Ik~~~Glk-~vgvWhal~GYWgGi-~-P~s~~~~~d~~~~~~~~~G~g---~v~p~da~~fy~~~~---~~L 351 (724)
+++.+++.+|+ +|=| .+=+||+ |.+.-- . +.. ... -+.-..+...+.. -++.+++++.-++|. +..
T Consensus 79 ~~~~l~d~vh~-~Ga~i~~QL~H~--Gr~~~~~~~~~~-~~~-~~~ps~~~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a 153 (361)
T cd04747 79 GWKKVVDEVHA-AGGKIAPQLWHV--GAMRKLGTPPFP-DVP-PLSPSGLVGPGKPVGREMTEADIDDVIAAFARAAADA 153 (361)
T ss_pred HHHHHHHHHHh-cCCEEEEeccCC--CCCcCcccCccC-CCc-eeCCCCCCcCCCCCCccCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999 7844 3457885 443210 0 000 000 0000000000001 123356666655553 455
Q ss_pred hhcCCCEEEEcccc
Q 046494 352 ANSGVDGVKVDVQS 365 (724)
Q Consensus 352 as~GVD~VKvD~q~ 365 (724)
.++|+|+|-+-+.+
T Consensus 154 ~~aGfDgVeih~ah 167 (361)
T cd04747 154 RRLGFDGIELHGAH 167 (361)
T ss_pred HHcCCCEEEEeccc
Confidence 77899999998765
Done!