BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046499
(124 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q851R2|MEL1_ORYSJ Protein argonaute MEL1 OS=Oryza sativa subsp. japonica GN=MEL1 PE=2
SV=1
Length = 1058
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 94/219 (42%), Gaps = 96/219 (43%)
Query: 1 MKQLLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLID--------------- 45
+ +L++ HGKT G LPAYDGRK YTAG+LPF S++F +KLID
Sbjct: 249 LNELIKLHGKTSLGGKLPAYDGRKSLYTAGSLPFESEEFVVKLIDPEKKDKERAEREYKI 308
Query: 46 ---------------------RD--------------ESGDINCTVVGRSFFAPGF-HKS 69
RD ES N V RSFF+ F H+
Sbjct: 309 TIRIAGRTDLYHLQQFLLGRQRDMPQETIQVLDVVLRESPSWNYVTVSRSFFSTQFGHRG 368
Query: 70 EIGFGVECWKGFYQSLRPTQMGMSLNM--------------------------------- 96
+IG G+ECW+G+YQSLRPTQMG+SLN+
Sbjct: 369 DIGEGLECWRGYYQSLRPTQMGLSLNIDISATSFFKPVTVIQFVEEFLNIRDTSRPLSDR 428
Query: 97 ----------GVKVEVAHGES--KRYRVSGITSQPTKKL 123
GV++E H E +RY+++GIT P +L
Sbjct: 429 DRVKIKKALRGVRIETNHQEDQIRRYKITGITPIPMSQL 467
>sp|Q852N2|AGO13_ORYSJ Protein argonaute 13 OS=Oryza sativa subsp. japonica GN=AGO13 PE=2
SV=1
Length = 1192
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 91/194 (46%), Gaps = 71/194 (36%)
Query: 1 MKQLLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESG--------DI 52
+ +L++ HGKT G LPAYDGRK YTAG+LPF S++F +KLID ++ I
Sbjct: 50 LNELIKLHGKTSLGGKLPAYDGRKSLYTAGSLPFESEEFVVKLIDPEKKDKERAEREYKI 109
Query: 53 NCTVVGRSFF-------------APGF-----HKSEIGFGVECWKGFYQSLRPTQMGMSL 94
+ GR+ F P H+ +IG G+ECW+G+YQSLRPTQMG+SL
Sbjct: 110 TIRIAGRTDFYHLQQFLLGRQRDMPQETIQFGHRGDIGEGLECWRGYYQSLRPTQMGLSL 169
Query: 95 NM-------------------------------------------GVKVEVAHGES--KR 109
N+ GV++E H E +R
Sbjct: 170 NIDISATSFFKPVTVIQFVEEFLNIRDTSRPLSDRDRVKIKKALRGVRIETNHQEDQIRR 229
Query: 110 YRVSGITSQPTKKL 123
Y+++GIT P +L
Sbjct: 230 YKITGITPIPMSQL 243
>sp|Q6Z4F1|AGO14_ORYSJ Protein argonaute 14 OS=Oryza sativa subsp. japonica GN=AGO14 PE=2
SV=1
Length = 1052
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 88/217 (40%), Gaps = 94/217 (43%)
Query: 1 MKQLLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKL----------------- 43
M +L H ++H G AYDG K YTAG LPF S DF IKL
Sbjct: 243 MSELARLHRESHLGGISFAYDGSKALYTAGKLPFDSMDFKIKLGKELREIEYKVTIRRAG 302
Query: 44 -------------IDRD--------------ESGDINCTVVGRSFFAPGFHKSEIGFGVE 76
RD ES +N +V RSF++ F + +IG G+E
Sbjct: 303 QADLHHLHEFIAGRQRDSQQQTIQALDVVLRESPSLNYVIVSRSFYSTMFGRQDIGDGLE 362
Query: 77 CWKGFYQSLRPTQMGMSLNM---------------------------------------- 96
CWKG+YQSLRPTQMG+SLN+
Sbjct: 363 CWKGYYQSLRPTQMGLSLNIDISSTPFFKPISVVEYVKNCLGTPTNANGPDPRRPLSDID 422
Query: 97 ---------GVKVEVAH-GESKRYRVSGITSQPTKKL 123
GV+VE H G+S +Y+++ ITS+P +L
Sbjct: 423 RLKVKKALRGVRVETTHQGKSSKYKITTITSEPLSQL 459
>sp|Q6K972|AGO1C_ORYSJ Protein argonaute 1C OS=Oryza sativa subsp. japonica GN=AGO1C PE=2
SV=1
Length = 1011
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 93/220 (42%), Gaps = 97/220 (44%)
Query: 1 MKQLLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDE-SGD-------- 51
+K+L+ + ++ G LPAYDGRK YTAG LPFTS++F I L+D D+ SG
Sbjct: 193 IKELVNLYKASYLGGRLPAYDGRKSLYTAGPLPFTSQEFQITLLDDDDGSGSERRQRTFR 252
Query: 52 -------------INCTVVGR-----------------------------SFFAPGF-HK 68
+ + GR SFF+P +
Sbjct: 253 VVIKFAARADLHRLELFLAGRHAEAPQEALQVLDIVLRELPSARYAPFGRSFFSPYLGRR 312
Query: 69 SEIGFGVECWKGFYQSLRPTQMGMSLNM-------------------------------- 96
+G G+E W+GFYQS+RPTQMG+SLN+
Sbjct: 313 QPLGEGLESWRGFYQSIRPTQMGLSLNIDMSATAFIEPLPVIDFVAQLLNSDIHSRPLSD 372
Query: 97 -----------GVKVEVAH--GESKRYRVSGITSQPTKKL 123
GVKVEV H ++YR+SG+T QPT++L
Sbjct: 373 AERVKIKKALRGVKVEVTHRGNMRRKYRISGLTIQPTREL 412
>sp|O04379|AGO1_ARATH Protein argonaute 1 OS=Arabidopsis thaliana GN=AGO1 PE=1 SV=1
Length = 1048
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 89/220 (40%), Gaps = 97/220 (44%)
Query: 1 MKQLLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLID---------RDESGD 51
MKQL++ + +H LPAYDGRK YTAG LPF SK+F I L+D R+
Sbjct: 229 MKQLVDNYRDSHLGSRLPAYDGRKSLYTAGPLPFNSKEFRINLLDEEVGAGGQRREREFK 288
Query: 52 INCTVVGR------------------------------------------SFFAPGF-HK 68
+ +V R SF++P K
Sbjct: 289 VVIKLVARADLHHLGMFLEGKQSDAPQEALQVLDIVLRELPTSRYIPVGRSFYSPDIGKK 348
Query: 69 SEIGFGVECWKGFYQSLRPTQMGMSLNM-------------------------------- 96
+G G+E W+GFYQS+RPTQMG+SLN+
Sbjct: 349 QSLGDGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEANPVIQFVCDLLNRDISSRPLSD 408
Query: 97 -----------GVKVEVAH--GESKRYRVSGITSQPTKKL 123
GVKVEV H ++YR+SG+T+ T++L
Sbjct: 409 ADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTAVATREL 448
>sp|Q69VD5|PNH1_ORYSJ Protein argonaute PNH1 OS=Oryza sativa subsp. japonica GN=PHN1 PE=2
SV=1
Length = 979
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 88/220 (40%), Gaps = 97/220 (44%)
Query: 1 MKQLLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRD------------- 47
M +L+ + + G LPAYDGRK YTAG LPF +++F ++L D D
Sbjct: 174 MSELVRLYHDSDLGGRLPAYDGRKNLYTAGTLPFDAREFVVRLTDDDDGTGVPPREREYR 233
Query: 48 --------------------------------------ESGDINCTVVGRSFFAPGFHKS 69
E + +GRSF++P K
Sbjct: 234 VAIKFAARADLHHLRQFIAGRQADAPQEALQVLDIVLRELANRRYVSIGRSFYSPDIRKP 293
Query: 70 E-IGFGVECWKGFYQSLRPTQMGMSLNM-------------------------------- 96
+ +G G++ W GFYQS+RPTQMG+SLN+
Sbjct: 294 QRLGDGLQSWCGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVAQILGKDVISRPLSD 353
Query: 97 -----------GVKVEVAH--GESKRYRVSGITSQPTKKL 123
GVKVEV H ++YR+SG+T+QPT +L
Sbjct: 354 ANRIKIKKALRGVKVEVTHRGNVRRKYRISGLTTQPTHEL 393
>sp|Q5Z5B2|AGO1D_ORYSJ Protein argonaute 1D OS=Oryza sativa subsp. japonica GN=AGO1D PE=2
SV=1
Length = 1038
Score = 89.4 bits (220), Expect = 7e-18, Method: Composition-based stats.
Identities = 69/220 (31%), Positives = 92/220 (41%), Gaps = 97/220 (44%)
Query: 1 MKQLLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDE-SGD-------- 51
M++L+ H ++ G LPAYDGRK YTAG LPFTSK+F I L++ D+ SG
Sbjct: 221 MEELVRLHKMSYLGGRLPAYDGRKSLYTAGPLPFTSKEFRISLLEEDDGSGSERRQKTYN 280
Query: 52 -------------INCTVVGRSFFAPG--------------------FHKS--------- 69
+ + GR AP F +S
Sbjct: 281 VVIKFAARADLHRLEQFLAGRQAEAPQEALQVLDIVLRELPTARYAPFGRSFFSPDLGRR 340
Query: 70 -EIGFGVECWKGFYQSLRPTQMGMSLNM-------------------------------- 96
+G G+E W+GFYQS+RPTQMG+SLN+
Sbjct: 341 RSLGEGLETWRGFYQSIRPTQMGLSLNIDMSATAFFEPLPVIDFVIQLLNTDIRSRPLSD 400
Query: 97 -----------GVKVEVAH-GESKR-YRVSGITSQPTKKL 123
GVKV V H G +R YR+SG+TSQ T++L
Sbjct: 401 AERVKIKKALRGVKVGVTHRGNMRRKYRISGLTSQATREL 440
>sp|Q6EU14|AGO1A_ORYSJ Protein argonaute 1A OS=Oryza sativa subsp. japonica GN=AGO1A PE=2
SV=1
Length = 1082
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 90/222 (40%), Gaps = 101/222 (45%)
Query: 3 QLLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDES------------- 49
+++ ++ ++H G LP YDGRK YTAG LPFTS+ F++ L D +ES
Sbjct: 259 EIVTQYRQSHLGGRLPVYDGRKSLYTAGPLPFTSRTFDVILQDEEESLAVGQGAQRRERP 318
Query: 50 ----------GDINCT---VVGRSFFAP------------------------GFHKSEIG 72
D++ + GR AP F+ +G
Sbjct: 319 FKVVIKFAARADLHHLAMFLAGRQADAPQEALQVLDIVLRELPTARYSPVARSFYSPNLG 378
Query: 73 F------GVECWKGFYQSLRPTQMGMSLNM------------------------------ 96
G+E W+GFYQS+RPTQMG+SLN+
Sbjct: 379 RRQQLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVAQLLNRDISVRPL 438
Query: 97 -------------GVKVEVAH--GESKRYRVSGITSQPTKKL 123
GVKVEV H ++YR+SG+TSQ T++L
Sbjct: 439 SDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATREL 480
>sp|Q9XGW1|AGO10_ARATH Protein argonaute 10 OS=Arabidopsis thaliana GN=AGO10 PE=2 SV=1
Length = 988
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 91/221 (41%), Gaps = 98/221 (44%)
Query: 1 MKQLLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFN-------------------- 40
+ +L+ + ++ LPAYDGRK YTAG LPFT K+F+
Sbjct: 178 IAELVRLYKESDLGRRLPAYDGRKSLYTAGELPFTWKEFSVKIVDEDDGIINGPKRERSY 237
Query: 41 ---IKLIDR------------------DESGDINCTV-----------VGRSFFAPGFHK 68
IK + R E+ I V VGRSFF+P
Sbjct: 238 KVAIKFVARANMHHLGEFLAGKRADCPQEAVQILDIVLRELSVKRFCPVGRSFFSPDIKT 297
Query: 69 SE-IGFGVECWKGFYQSLRPTQMGMSLNM------------------------------- 96
+ +G G+E W GFYQS+RPTQMG+SLN+
Sbjct: 298 PQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVIEFVAQLLGKDVLSKPLS 357
Query: 97 ------------GVKVEVAHGES--KRYRVSGITSQPTKKL 123
GVKVEV H + ++YRV+G+T+QPT++L
Sbjct: 358 DSDRVKIKKGLRGVKVEVTHRANVRRKYRVAGLTTQPTREL 398
>sp|Q7Y001|AGO12_ORYSJ Protein argonaute 12 OS=Oryza sativa subsp. japonica GN=AGO12 PE=2
SV=2
Length = 1049
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 69/153 (45%), Gaps = 56/153 (36%)
Query: 1 MKQLLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDF--------------------- 39
+ +L+ H K +G LP YDGRK YTAG LPF +KDF
Sbjct: 243 INKLVALH-KQFLDGRLPVYDGRKSIYTAGPLPFKTKDFVVKHINPLRGNQREEEYKVTI 301
Query: 40 -------------------------NIKLID---RDESGDINCTV-----VGRSFFAPGF 66
I+ +D R+ +N T + RSFF+ F
Sbjct: 302 KQASKTDLYSLKQFLVGRQRELPQDTIQALDIALRECPTSVNFTCDRYVSISRSFFSQSF 361
Query: 67 -HKSEIGFGVECWKGFYQSLRPTQMGMSLNMGV 98
H EIG G ECW+G+YQSLRPTQMG+SLN+ +
Sbjct: 362 GHGGEIGSGTECWRGYYQSLRPTQMGLSLNIDI 394
>sp|Q69UP6|AGO18_ORYSJ Protein argonaute 18 OS=Oryza sativa subsp. japonica GN=AGO18 PE=2
SV=1
Length = 1088
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 62/144 (43%), Gaps = 46/144 (31%)
Query: 1 MKQLLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKL----------------- 43
+ +L+ + T F G LP YDGR YTAG LPF S++ ++L
Sbjct: 306 ISKLVTERRHTDFGGRLPVYDGRANLYTAGELPFRSRELEVELSGSRKFKVAIRHVAPVS 365
Query: 44 -------------------------IDRD----ESGDINCTVVGRSFFAPGFHKSEIGFG 74
+ RD E D+ GRS+F+PG E+ G
Sbjct: 366 LQDLRMVMAGCPAGIPSQALQLLDIVLRDMVLAERNDMGYVAFGRSYFSPGLGSRELDKG 425
Query: 75 VECWKGFYQSLRPTQMGMSLNMGV 98
+ WKGFYQS R TQ G+SLN+ +
Sbjct: 426 IFAWKGFYQSCRVTQQGLSLNIDM 449
>sp|Q9SJK3|AGO5_ARATH Protein argonaute 5 OS=Arabidopsis thaliana GN=AGO5 PE=1 SV=2
Length = 997
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 67/154 (43%), Gaps = 56/154 (36%)
Query: 1 MKQLLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESG---------- 50
MK L++ + +H G PAYDGRK YTAG LPF SK+F + L ++ G
Sbjct: 197 MKLLVKNYKDSHLGGKSPAYDGRKSLYTAGPLPFDSKEFVVNLAEKRADGSSGKDRPFKV 256
Query: 51 ---DINCT-------------------------VVGR------------SFFAPGFHKS- 69
++ T VV R SFF K
Sbjct: 257 AVKNVTSTDLYQLQQFLDRKQREAPYDTIQVLDVVLRDKPSNDYVSVGRSFFHTSLGKDA 316
Query: 70 -----EIGFGVECWKGFYQSLRPTQMGMSLNMGV 98
E+G G+E W+G++QSLR TQMG+SLN+ V
Sbjct: 317 RDGRGELGDGIEYWRGYFQSLRLTQMGLSLNIDV 350
>sp|Q7XSA2|AGO1B_ORYSJ Protein argonaute 1B OS=Oryza sativa subsp. japonica GN=AGO1B PE=2
SV=3
Length = 1118
Score = 69.3 bits (168), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/113 (37%), Positives = 57/113 (50%), Gaps = 46/113 (40%)
Query: 57 VGRSFFAPGF-HKSEIGFGVECWKGFYQSLRPTQMGMSLNM------------------- 96
VGRSF++P + ++G G+E W+GFYQS+RPTQMG+SLN+
Sbjct: 405 VGRSFYSPNLGRRQQLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVAQ 464
Query: 97 ------------------------GVKVEVAH-GESKR-YRVSGITSQPTKKL 123
GVKVEV H G +R YR+SG+TSQ T++L
Sbjct: 465 LLNRDISVRPLSDSDRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATREL 517
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 32/49 (65%)
Query: 1 MKQLLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDES 49
M +L+ + +H G LPAYDGRK YTAG LPF S+ F I L D ++S
Sbjct: 294 MFELVTLYRYSHLGGRLPAYDGRKSLYTAGPLPFASRTFEITLQDEEDS 342
>sp|Q10F39|AGO11_ORYSJ Protein argonaute 11 OS=Oryza sativa subsp. japonica GN=AGO11 PE=2
SV=2
Length = 892
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 1 MKQLLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGD 51
+ +LL H K PAYDGRKG +TAGALPFT ++F +K+ + E G+
Sbjct: 176 INELLRSHKKYLDGRRSPAYDGRKGMFTAGALPFTDREFVVKIANDPERGN 226
>sp|Q6H6C3|AGO17_ORYSJ Protein argonaute 17 OS=Oryza sativa subsp. japonica GN=AGO17 PE=2
SV=1
Length = 876
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 62/156 (39%), Gaps = 54/156 (34%)
Query: 1 MKQLLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDINCTVVGRS 60
+++L+++ + G LPAYDGRK YT+G LPF S F + L ++S + + + R
Sbjct: 85 IRELVKQQKDSGLGGRLPAYDGRKRLYTSGPLPFDSHRFLVLLDSIEDSPEESRHLRVRD 144
Query: 61 F------------------------------------------------FAPGFHKSEIG 72
F FA F+ +G
Sbjct: 145 FVVTLKFAAKISLWTLRKFRGGKPNRESRAALRALDVVLKELPTARYTQFAGSFYSPNLG 204
Query: 73 FG------VECWKGFYQSLRPTQMGMSLNMGVKVEV 102
+E W+GF+Q ++ TQMG+ LN+ V V
Sbjct: 205 ECRQLCKVLESWRGFHQRIQATQMGLQLNIDVSSSV 240
>sp|Q9C793|AGO7_ARATH Protein argonaute 7 OS=Arabidopsis thaliana GN=AGO7 PE=2 SV=1
Length = 990
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 54 CTVVGRSFFAPGFHKS-EIGFGVECWKGFYQSLRPTQMGMSLNMGVKVEVAH 104
CT +GRSF++ S EIG G +GF+QSLR TQ G++LNM + + H
Sbjct: 314 CTSIGRSFYSSSMGGSKEIGGGAVGLRGFFQSLRHTQQGLALNMDLSITAFH 365
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 1 MKQLLEKHGKTHFNGCLPAYDGRKGFYT 28
+KQ L + + F+G +PA+DGR+ Y+
Sbjct: 200 IKQKLVETDRNSFSGVVPAFDGRQNIYS 227
>sp|Q8CJG1|AGO1_MOUSE Protein argonaute-1 OS=Mus musculus GN=Eif2c1 PE=1 SV=2
Length = 857
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 53/129 (41%), Gaps = 49/129 (37%)
Query: 18 PAYDGRKGFYTAGALPFTSK--DFNIKL-------------------------------- 43
P YDG+K YT ALP ++ DF + +
Sbjct: 90 PVYDGKKNIYTVTALPIGNERVDFEVTIPGEGKDRIFKVSIKWLAIVSWRMLHEALVSGQ 149
Query: 44 ----IDRDESGDINC--------TVVGRSFFAP--GFHKSEIGFGVECWKGFYQSLRPTQ 89
++ ++ D+ T VGRSFF+P G++ +G G E W GF+QS+RP
Sbjct: 150 IPVPLESVQALDVAMRHLASMRYTPVGRSFFSPPEGYYHP-LGGGREVWFGFHQSVRPAM 208
Query: 90 MGMSLNMGV 98
M LN+ V
Sbjct: 209 WKMMLNIDV 217
>sp|Q9UL18|AGO1_HUMAN Protein argonaute-1 OS=Homo sapiens GN=EIF2C1 PE=1 SV=3
Length = 857
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 53/129 (41%), Gaps = 49/129 (37%)
Query: 18 PAYDGRKGFYTAGALPFTSK--DFNIKL-------------------------------- 43
P YDG+K YT ALP ++ DF + +
Sbjct: 90 PVYDGKKNIYTVTALPIGNERVDFEVTIPGEGKDRIFKVSIKWLAIVSWRMLHEALVSGQ 149
Query: 44 ----IDRDESGDINC--------TVVGRSFFAP--GFHKSEIGFGVECWKGFYQSLRPTQ 89
++ ++ D+ T VGRSFF+P G++ +G G E W GF+QS+RP
Sbjct: 150 IPVPLESVQALDVAMRHLASMRYTPVGRSFFSPPEGYYHP-LGGGREVWFGFHQSVRPAM 208
Query: 90 MGMSLNMGV 98
M LN+ V
Sbjct: 209 WKMMLNIDV 217
>sp|Q9HCK5|AGO4_HUMAN Protein argonaute-4 OS=Homo sapiens GN=EIF2C4 PE=1 SV=2
Length = 861
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 55 TVVGRSFFAP--GFHKSEIGFGVECWKGFYQSLRPTQMGMSLNMGV 98
T VGRSFF+P G++ +G G E W GF+QS+RP M LN+ V
Sbjct: 165 TPVGRSFFSPPEGYYHP-LGGGREVWFGFHQSVRPAMWNMMLNIDV 209
>sp|Q5ZMW0|AGO4_CHICK Protein argonaute-4 OS=Gallus gallus GN=EIF2C4 PE=2 SV=1
Length = 794
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 49/129 (37%)
Query: 18 PAYDGRKGFYTAGALPF-------------TSKD------------FNIKLIDRDESGDI 52
P YDG++ YTA LP KD +++L+ +G +
Sbjct: 15 PGYDGKRNMYTAHPLPIGRDRVDMEVTLPGEGKDQTFKVSIQWVSVVSLQLLLEALAGHL 74
Query: 53 N---------------------CTVVGRSFFAP--GFHKSEIGFGVECWKGFYQSLRPTQ 89
N T VGRSFF+P G++ +G G E W GF+QS+RP
Sbjct: 75 NEVPEDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHP-LGGGREVWFGFHQSVRPAM 133
Query: 90 MGMSLNMGV 98
M LN+ V
Sbjct: 134 WNMMLNIDV 142
>sp|Q8CJF8|AGO4_MOUSE Protein argonaute-4 OS=Mus musculus GN=Eif2c4 PE=2 SV=2
Length = 861
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 55 TVVGRSFFAP--GFHKSEIGFGVECWKGFYQSLRPTQMGMSLNMGV 98
T VGRSFF+P G++ +G G E W GF+QS+RP M LN+ V
Sbjct: 165 TPVGRSFFSPPEGYYHP-LGGGREVWFGFHQSVRPAMWNMMLNIDV 209
>sp|Q4KLV6|AGO4_XENLA Protein argonaute-4 OS=Xenopus laevis GN=eif2c4 PE=2 SV=1
Length = 884
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 55 TVVGRSFFAP--GFHKSEIGFGVECWKGFYQSLRPTQMGMSLNMGV 98
T VGRSFF+P G++ +G G E W GF+QS+RP M LN+ V
Sbjct: 188 TPVGRSFFSPPEGYYHP-LGGGREVWFGFHQSVRPAMWNMMLNIDV 232
>sp|Q6T5B7|AGO3_BOVIN Protein argonaute-3 OS=Bos taurus GN=EIF2C3 PE=2 SV=2
Length = 861
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 55 TVVGRSFF-APGFHKSEIGFGVECWKGFYQSLRPTQMGMSLNMGV 98
T VGRSFF AP + +G G E W GF+QS+RP M LN+ V
Sbjct: 176 TPVGRSFFSAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 220
>sp|Q5ZLG4|AGO3_CHICK Protein argonaute-3 OS=Gallus gallus GN=EIF2C3 PE=2 SV=1
Length = 860
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 55 TVVGRSFF-APGFHKSEIGFGVECWKGFYQSLRPTQMGMSLNMGV 98
T VGRSFF AP + +G G E W GF+QS+RP M LN+ V
Sbjct: 176 TPVGRSFFSAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 220
>sp|Q9H9G7|AGO3_HUMAN Protein argonaute-3 OS=Homo sapiens GN=EIF2C3 PE=1 SV=2
Length = 860
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 55 TVVGRSFF-APGFHKSEIGFGVECWKGFYQSLRPTQMGMSLNMGV 98
T VGRSFF AP + +G G E W GF+QS+RP M LN+ V
Sbjct: 176 TPVGRSFFSAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 220
>sp|Q8CJF9|AGO3_MOUSE Protein argonaute-3 OS=Mus musculus GN=Eif2c3 PE=2 SV=2
Length = 860
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 55 TVVGRSFF-APGFHKSEIGFGVECWKGFYQSLRPTQMGMSLNMGV 98
T VGRSFF AP + +G G E W GF+QS+RP M LN+ V
Sbjct: 176 TPVGRSFFSAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 220
>sp|O74957|AGO1_SCHPO Protein argonaute OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=ago1 PE=1 SV=1
Length = 834
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 60 SFFAPGFHKSEIGFGVECWKGFYQSLRPTQMGMSLNMGV 98
SFF G + +G GVE WKGFYQS+RP Q MS+N+ +
Sbjct: 163 SFFT-GENGVSLGGGVEAWKGFYQSIRPNQGFMSVNVDI 200
>sp|A3KPK0|AGO3_DANRE Protein argonaute-3 OS=Danio rerio GN=eif2c3 PE=3 SV=1
Length = 860
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 55 TVVGRSFFA-PGFHKSEIGFGVECWKGFYQSLRPTQMGMSLNMGV 98
T VGRSFF+ P + +G G E W GF+QS+RP M LN+ V
Sbjct: 176 TPVGRSFFSSPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDV 220
>sp|Q3E984|AGO8_ARATH Protein argonaute 8 OS=Arabidopsis thaliana GN=AGO8 PE=3 SV=1
Length = 850
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 54 CTVVGRSFF-APGFHKSEIGFGVECWKGFYQSLRPTQMGMSLNMGV 98
C +V +SFF + + IG GV+C KGF+ S R TQ G+SLN+ V
Sbjct: 192 CLLVRQSFFHNDAKYFANIGEGVDCCKGFHSSFRTTQGGLSLNIDV 237
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 19 AYDGRKGFYTAGALPFTSKDFNIKL 43
AYDG K YT G LP +S DF++ L
Sbjct: 98 AYDGDKNLYTVGPLPRSSLDFSVVL 122
>sp|O77503|AGO2_RABIT Protein argonaute-2 (Fragment) OS=Oryctolagus cuniculus GN=EIF2C2
PE=1 SV=2
Length = 840
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 54/146 (36%), Gaps = 52/146 (35%)
Query: 5 LEKHGKTHFNGCL-----PAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGD-------- 51
+ +H HF + P +DGRK YTA LP + +++ E D
Sbjct: 55 IVEHMVQHFKAQIFGDRKPVFDGRKNLYTAMPLPIGREKVELEVTLPGEGKDRIFKVSIK 114
Query: 52 -INC-------------------------------------TVVGRSFF-APGFHKSEIG 72
++C T VGRSFF A + +G
Sbjct: 115 WVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSNPLG 174
Query: 73 FGVECWKGFYQSLRPTQMGMSLNMGV 98
G E W GF+QS+RP+ M LN+ V
Sbjct: 175 GGREVWFGFHQSVRPSLWKMMLNIDV 200
>sp|Q6QME8|AGO2_BOVIN Protein argonaute-2 OS=Bos taurus GN=EIF2C2 PE=2 SV=1
Length = 860
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 53/142 (37%), Gaps = 48/142 (33%)
Query: 5 LEKHGKTH-FNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGD---------INC 54
+ +H KT F P +DGRK YTA LP +++ E D ++C
Sbjct: 79 MVQHFKTQIFGDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGEGKDRIFKVSIKWVSC 138
Query: 55 -------------------------------------TVVGRSFF-APGFHKSEIGFGVE 76
T VGRSFF A + +G G E
Sbjct: 139 VSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSNPLGGGRE 198
Query: 77 CWKGFYQSLRPTQMGMSLNMGV 98
W GF+QS+RP+ M LN+ V
Sbjct: 199 VWFGFHQSVRPSLWKMMLNIDV 220
>sp|Q9UKV8|AGO2_HUMAN Protein argonaute-2 OS=Homo sapiens GN=EIF2C2 PE=1 SV=3
Length = 859
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 53/142 (37%), Gaps = 48/142 (33%)
Query: 5 LEKHGKTH-FNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGD---------INC 54
+ +H KT F P +DGRK YTA LP +++ E D ++C
Sbjct: 78 MVQHFKTQIFGDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGEGKDRIFKVSIKWVSC 137
Query: 55 -------------------------------------TVVGRSFF-APGFHKSEIGFGVE 76
T VGRSFF A + +G G E
Sbjct: 138 VSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSNPLGGGRE 197
Query: 77 CWKGFYQSLRPTQMGMSLNMGV 98
W GF+QS+RP+ M LN+ V
Sbjct: 198 VWFGFHQSVRPSLWKMMLNIDV 219
>sp|Q9QZ81|AGO2_RAT Protein argonaute-2 OS=Rattus norvegicus GN=Eif2c2 PE=2 SV=2
Length = 860
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 53/142 (37%), Gaps = 48/142 (33%)
Query: 5 LEKHGKTH-FNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGD---------INC 54
+ +H KT F P +DGRK YTA LP +++ E D ++C
Sbjct: 79 MVQHFKTQIFGDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGEGKDRIFKVSIKWVSC 138
Query: 55 -------------------------------------TVVGRSFF-APGFHKSEIGFGVE 76
T VGRSFF A + +G G E
Sbjct: 139 VSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSNPLGGGRE 198
Query: 77 CWKGFYQSLRPTQMGMSLNMGV 98
W GF+QS+RP+ M LN+ V
Sbjct: 199 VWFGFHQSVRPSLWKMMLNIDV 220
>sp|Q8CJG0|AGO2_MOUSE Protein argonaute-2 OS=Mus musculus GN=Eif2c2 PE=1 SV=3
Length = 860
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 53/142 (37%), Gaps = 48/142 (33%)
Query: 5 LEKHGKTH-FNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGD---------INC 54
+ +H KT F P +DGRK YTA LP +++ E D ++C
Sbjct: 79 MVQHFKTQIFGDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGEGKDRIFKVSIKWVSC 138
Query: 55 -------------------------------------TVVGRSFF-APGFHKSEIGFGVE 76
T VGRSFF A + +G G E
Sbjct: 139 VSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSNPLGGGRE 198
Query: 77 CWKGFYQSLRPTQMGMSLNMGV 98
W GF+QS+RP+ M LN+ V
Sbjct: 199 VWFGFHQSVRPSLWKMMLNIDV 220
>sp|Q75HC2|AGO7_ORYSJ Protein argonaute 7 OS=Oryza sativa subsp. japonica GN=AGO7 PE=2
SV=2
Length = 1048
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 56 VVGRSFFAPGFHKS-EIGFGVECWKGFYQSLRPTQMGMSLNMGVKVEVAH 104
+VGRS +A ++ +IG G +GF+Q LRPT+ G++LN+ + + H
Sbjct: 362 LVGRSLYARSMGEARDIGGGAVGLRGFFQRLRPTKQGLALNVDLSLSAFH 411
>sp|Q6DJB9|AGO2_XENTR Protein argonaute-2 OS=Xenopus tropicalis GN=eif2c2 PE=2 SV=1
Length = 871
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 55 TVVGRSFF-APGFHKSEIGFGVECWKGFYQSLRPTQMGMSLNMGV 98
T VGRSFF A + +G G E W GF+QS+RP+ M LN+ V
Sbjct: 178 TPVGRSFFTASEGCANPLGGGREVWFGFHQSVRPSLWKMMLNIDV 222
>sp|Q6DCX2|AGO2_XENLA Protein argonaute-2 OS=Xenopus laevis GN=eif2c2 PE=2 SV=1
Length = 862
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 55 TVVGRSFF-APGFHKSEIGFGVECWKGFYQSLRPTQMGMSLNMGV 98
T VGRSFF A + +G G E W GF+QS+RP+ M LN+ V
Sbjct: 178 TPVGRSFFTASEGCANPLGGGREVWFGFHQSVRPSLWKMMLNIDV 222
>sp|Q9SDG8|AGO4A_ORYSJ Protein argonaute 4A OS=Oryza sativa subsp. japonica GN=AGO4A PE=2
SV=1
Length = 904
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 41 IKLIDRDESGDINCTVVGRSFFAPGFHK-SEIGFGVECWKGFYQSLRPTQMGMSLNMGV 98
I +I R S C +V +SFF ++G GV +GF+ S R TQ G+SLN+ V
Sbjct: 206 IDIILRQHSAKQGCLLVRQSFFHNNPSNFVDLGGGVMGCRGFHSSFRATQSGLSLNIDV 264
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 19 AYDGRKGFYTAGALPFTSKDFNIKLID 45
AYDG K +T GALP + +F + L D
Sbjct: 112 AYDGEKSLFTIGALPQVNNEFTVVLED 138
>sp|Q0JF58|AGO4B_ORYSJ Protein argonaute 4B OS=Oryza sativa subsp. japonica GN=AGO4B PE=2
SV=1
Length = 911
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 41 IKLIDRDESGDINCTVVGRSFFAPGFHK-SEIGFGVECWKGFYQSLRPTQMGMSLNMGV 98
+ +I R S C +V +SFF + ++G GV +GF+ S R TQ G+SLN+ V
Sbjct: 213 LDIILRQHSAKQGCLLVRQSFFHNNPNNFVDLGGGVMGCRGFHSSFRGTQSGLSLNIDV 271
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 19 AYDGRKGFYTAGALPFTSKDFNIKLID 45
AYDG K +T GALP + +F + L D
Sbjct: 118 AYDGEKSLFTIGALPQVTNEFTVVLED 144
>sp|Q9ZVD5|AGO4_ARATH Protein argonaute 4 OS=Arabidopsis thaliana GN=AGO4 PE=1 SV=2
Length = 924
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 41 IKLIDRDESGDINCTVVGRSFFAPGFHKSE-IGFGVECWKGFYQSLRPTQMGMSLNMGV 98
+ +I R + C +V +SFF E +G + +GF+ S R TQ GMSLNM V
Sbjct: 224 LDIILRQHAARQGCLLVRQSFFHNDPTNCEPVGGNILGCRGFHSSFRTTQGGMSLNMDV 282
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 2 KQLLEKHGKTH---FNGCLPAYDGRKGFYTAGALPFTSKDFNIKL 43
+++L+K +T+ +G AYDG K +T GALP DF++ L
Sbjct: 109 RKILDKVHQTYHSDLDGKEFAYDGEKTLFTYGALPSNKMDFSVVL 153
>sp|Q1QVQ3|GLPK_CHRSD Glycerol kinase OS=Chromohalobacter salexigens (strain DSM 3043 /
ATCC BAA-138 / NCIMB 13768) GN=glpK PE=3 SV=1
Length = 501
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 18/72 (25%)
Query: 49 SGDINCTVVGRSFFAPGFHKSEIGFGVECWKGFYQSLRPTQMGMSLNMGVKVEVAHGE-- 106
+GD +VG++ FAPG KS G G C+ M +N G K EV+H
Sbjct: 241 AGDQQAALVGQTCFAPGMAKSTYGTG--CF-------------MIINTGEKAEVSHNRLL 285
Query: 107 -SKRYRVSGITS 117
+ YR++G T+
Sbjct: 286 TTVAYRLNGKTT 297
>sp|Q84VQ0|AGO9_ARATH Protein argonaute 9 OS=Arabidopsis thaliana GN=AGO9 PE=1 SV=2
Length = 896
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 41 IKLIDRDESGDINCTVVGRSFFAPGFHK-SEIGFGVECWKGFYQSLRPTQMGMSLNM 96
+ +I R + C +V +SFF IG GV +GF+ S R TQ G+SLN+
Sbjct: 199 LDIILRQSAARQGCLLVRQSFFHNDVKNFVPIGGGVSGCRGFHSSFRTTQGGLSLNI 255
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 19 AYDGRKGFYTAGALPFTSKDFNIKL 43
AYDG K +T GALP DF++ L
Sbjct: 110 AYDGEKTLFTVGALPSNKLDFSVVL 134
>sp|Q6YSJ5|AGO16_ORYSJ Protein argonaute 16 OS=Oryza sativa subsp. japonica GN=AGO16 PE=2
SV=2
Length = 883
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 41 IKLIDRDESGDINCTVVGRSFFAPGFHK-SEIGFGVECWKGFYQSLRPTQMGMSLNMGV 98
+ ++ R + C +V +SFF+ F ++ GV +G + S R T G+SLNM V
Sbjct: 186 LDIVLRQQQAKRGCLLVRQSFFSDDFRNLVDLTGGVSGCRGLHSSFRTTIGGLSLNMDV 244
>sp|Q9SHF3|AGO2_ARATH Protein argonaute 2 OS=Arabidopsis thaliana GN=AGO2 PE=1 SV=1
Length = 1014
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 48/134 (35%), Gaps = 45/134 (33%)
Query: 12 HFNGCLPAYDGRKGFYTAGALPF---------------TSKDFNIKLIDRDESGDINCTV 56
F + AYDG+K ++A LP S F IK ++ + GD+ +
Sbjct: 228 EFPLAMTAYDGQKNIFSAVELPTGSYKVEYPKTEEMRGRSYTFTIKQVNVLKLGDLKEYM 287
Query: 57 VGRSFFAP------------------------GFHKSEIG------FGVECWKGFYQSLR 86
GRS F P F E FGV KG+ +L+
Sbjct: 288 TGRSSFNPRDVLQGMDVVMKEHPSKCMITVGKSFFTRETEPDEDFRFGVIAAKGYRHTLK 347
Query: 87 PTQMGMSLNMGVKV 100
PT G+SL + V
Sbjct: 348 PTAQGLSLCLDYSV 361
>sp|O48771|AGO6_ARATH Protein argonaute 6 OS=Arabidopsis thaliana GN=AGO6 PE=2 SV=2
Length = 878
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 23 RKGFYTAGALPFTSKDFNIKLID---RDESGDINCTVVGRSFFAPGFHKSEIGFGVECWK 79
++G YT P S ++++D R ++ + C +V ++FF H ++G GV +
Sbjct: 175 QRGAYT----PDKSAQDALRVLDIVLRQQAAERGCLLVRQAFFHSDGHPMKVGGGVIGIR 230
Query: 80 GFYQSLRPTQMGMSLNMGV 98
G + S RPT G+SLN+ V
Sbjct: 231 GLHSSFRPTHGGLSLNIDV 249
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 1 MKQLLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDF 39
M QL + + + +G AYDG K YT G LP DF
Sbjct: 82 MDQLFKTYS-SDLDGKRLAYDGEKTLYTVGPLPQNEFDF 119
>sp|Q9VUQ5|AGO2_DROME Protein argonaute-2 OS=Drosophila melanogaster GN=AGO2 PE=1 SV=3
Length = 1214
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 2 KQLLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRD 47
+Q E+ G + AYDG+ Y+ LP S++ + + DR+
Sbjct: 449 RQAFEQFRVDQLGGAVLAYDGKASCYSVDKLPLNSQNPEVTVTDRN 494
>sp|Q9SHF2|AGO3_ARATH Protein argonaute 3 OS=Arabidopsis thaliana GN=AGO3 PE=3 SV=1
Length = 1194
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 44/123 (35%), Gaps = 44/123 (35%)
Query: 13 FNGCLPAYDGRKGFYTAGALPF----------------TSKDFNIKLIDRDESGDINCTV 56
F + AYDG+K ++A LP S F IK + + D+ +
Sbjct: 401 FPNAMTAYDGQKNIFSAVELPTGSFKVDFSETEEIMRGRSYTFIIKQVKELKLLDLQAYI 460
Query: 57 VGRSFFAP-----------GFHKS-----------------EIGFGVECWKGFYQSLRPT 88
GRS F P H S + G+GV KGF+ +L+PT
Sbjct: 461 DGRSTFIPRDVLQGMDVVMKEHPSKRMITVGKRFFSTRLEIDFGYGVGAAKGFHHTLKPT 520
Query: 89 QMG 91
G
Sbjct: 521 VQG 523
>sp|Q5NBN9|AGO15_ORYSJ Protein argonaute 15 OS=Oryza sativa subsp. japonica GN=AGO15 PE=2
SV=2
Length = 889
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 19 AYDGRKGFYTAGALPFTSKDFNIKLIDRDESG 50
AY+G KG +TAGAL T F + + D SG
Sbjct: 94 AYNGEKGLFTAGALLQTKHQFVVVMEDASSSG 125
>sp|A6T3N4|GLMU_JANMA Bifunctional protein GlmU OS=Janthinobacterium sp. (strain
Marseille) GN=glmU PE=3 SV=1
Length = 452
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 53 NCTVVGRSFFAPGFHKSEIGFGVECWKGFYQSLRP-TQMGMSLNMGVKVEVAHGE 106
N T+ RS P H G EC G Y LRP T + +++G VEV + +
Sbjct: 295 NSTIGARSHVRPYSHFENAVVGAECIIGPYARLRPGTVLAEDVHIGNFVEVKNSD 349
>sp|Q9LX49|PRN1_ARATH Pirin-1 OS=Arabidopsis thaliana GN=PRN1 PE=1 SV=1
Length = 287
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 10/83 (12%)
Query: 48 ESGDINCTVVGRSFFAPGFHKSEIGFGVECWKGF----------YQSLRPTQMGMSLNMG 97
++GD+ GR F + E+ G++ W Y+ L + + G
Sbjct: 90 QAGDVQWMTAGRGIIHSEFPEEEVNNGLQLWINLPSTEKMTEPKYKELSSLDIPRAEENG 149
Query: 98 VKVEVAHGESKRYRVSGITSQPT 120
V+V+V G+S + T PT
Sbjct: 150 VEVKVIAGDSMGIKSPVYTRTPT 172
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,591,463
Number of Sequences: 539616
Number of extensions: 1987625
Number of successful extensions: 3053
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2942
Number of HSP's gapped (non-prelim): 111
length of query: 124
length of database: 191,569,459
effective HSP length: 91
effective length of query: 33
effective length of database: 142,464,403
effective search space: 4701325299
effective search space used: 4701325299
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)