Query 046499
Match_columns 124
No_of_seqs 105 out of 458
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 12:45:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046499.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046499hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03202 protein argonaute; Pr 99.8 3.8E-21 8.2E-26 170.4 10.8 120 2-123 90-322 (900)
2 PF08699 DUF1785: Domain of un 99.7 1.1E-18 2.4E-23 105.8 3.0 43 55-97 1-43 (52)
3 KOG1041 Translation initiation 99.7 3.5E-16 7.6E-21 138.5 9.9 117 8-124 106-310 (876)
4 KOG1042 Germ-line stem cell di 98.2 1E-06 2.3E-11 76.2 4.0 115 3-122 131-312 (845)
5 cd02825 PAZ PAZ domain, named 92.8 0.081 1.8E-06 36.2 2.1 26 97-122 35-61 (115)
6 cd02846 PAZ_argonaute_like PAZ 91.3 0.2 4.3E-06 33.8 2.6 27 97-123 34-62 (114)
7 PF02170 PAZ: PAZ domain; Int 84.5 0.47 1E-05 33.0 1.0 27 97-123 31-58 (135)
8 cd02845 PAZ_piwi_like PAZ doma 77.1 2.7 5.8E-05 29.0 2.7 25 97-122 30-54 (117)
9 cd02844 PAZ_CAF_like PAZ domai 66.2 6 0.00013 28.1 2.5 23 97-121 33-55 (135)
10 KOG0143 Iron/ascorbate family 46.5 22 0.00048 28.6 3.1 33 73-105 214-257 (322)
11 PF09261 Alpha-mann_mid: Alpha 39.9 7.9 0.00017 24.5 -0.4 11 76-87 1-11 (80)
12 PLN02485 oxidoreductase 35.6 31 0.00066 27.6 2.3 24 73-96 226-251 (329)
13 PRK15318 intimin-like protein 33.3 29 0.00064 31.2 1.9 28 56-83 171-201 (730)
14 PLN02912 oxidoreductase, 2OG-F 33.2 53 0.0011 26.6 3.3 33 73-105 234-276 (348)
15 PLN02704 flavonol synthase 32.5 50 0.0011 26.5 3.1 25 72-96 235-260 (335)
16 PLN02750 oxidoreductase, 2OG-F 31.1 49 0.0011 26.7 2.8 25 72-96 229-256 (345)
17 PLN02904 oxidoreductase 31.1 49 0.0011 26.9 2.8 33 73-105 244-287 (357)
18 PLN02515 naringenin,2-oxogluta 30.3 68 0.0015 26.2 3.5 33 73-105 232-276 (358)
19 PLN02365 2-oxoglutarate-depend 29.1 57 0.0012 25.8 2.8 34 72-105 186-231 (300)
20 KOG1959 Glycosyl hydrolase, fa 28.7 17 0.00037 33.5 -0.3 18 74-92 357-374 (996)
21 PTZ00273 oxidase reductase; Pr 26.0 55 0.0012 26.0 2.2 34 72-105 214-258 (320)
22 PLN03002 oxidoreductase, 2OG-F 25.0 64 0.0014 25.9 2.5 24 73-96 220-249 (332)
23 PLN02254 gibberellin 3-beta-di 24.0 63 0.0014 26.3 2.3 33 73-105 247-290 (358)
24 PLN02156 gibberellin 2-beta-di 23.6 79 0.0017 25.6 2.7 24 73-96 217-242 (335)
25 COG5513 Predicted secreted pro 22.9 2.7E+02 0.0058 19.3 6.6 58 36-95 26-91 (113)
26 PLN00417 oxidoreductase, 2OG-F 22.4 84 0.0018 25.5 2.7 24 73-96 241-265 (348)
27 PLN02947 oxidoreductase 20.4 1.2E+02 0.0026 24.9 3.2 24 73-96 262-286 (374)
No 1
>PLN03202 protein argonaute; Provisional
Probab=99.85 E-value=3.8e-21 Score=170.35 Aligned_cols=120 Identities=33% Similarity=0.563 Sum_probs=96.0
Q ss_pred hHHHHhhccCCCCCCCceEeCCCceeecCCCCCCCceEEEEecCC----------------------------CCC----
Q 046499 2 KQLLEKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDR----------------------------DES---- 49 (124)
Q Consensus 2 ~~l~~~~~~~~f~~~~~ayDG~k~lyt~~~L~~~~~~f~V~l~~~----------------------------~~~---- 49 (124)
++++++++. .+.+..+||||+++|||+++||++..+|.|+++++ .++
T Consensus 90 ~~~~~~~~~-~~~~~~~~~Dg~~~l~s~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (900)
T PLN03202 90 DKVQETYSS-DLAGKDFAYDGEKSLFTVGALPQNKLEFTVVLEDVSSNRNNGNGSPVGNGSPNGGDRKRSRRPYQSKTFK 168 (900)
T ss_pred HHHHHhhHH-hhCCCceeecCccceEECccCCCCCceEEEEecccccccccccccccccCCccccccccccccCCCceEE
Confidence 456666653 36666799999999999999998666777766531 000
Q ss_pred ----------------------------------------Ccc-ceeeecccccCCCCC-CccCCCcEEEEeeeeeeeec
Q 046499 50 ----------------------------------------GDI-NCTVVGRSFFAPGFH-KSEIGFGVECWKGFYQSLRP 87 (124)
Q Consensus 50 ----------------------------------------~s~-~~~~vgrsff~~~~~-~~~Lg~G~e~w~Gf~qSvR~ 87 (124)
++. +++.+||+||.+... ..+||+|+|+|+|||+||||
T Consensus 169 v~i~~~~~i~~~~L~~~l~~~~~~~~~~~iq~lnivlr~~~~~~~~~~~gr~ff~~~~~~~~~l~~gle~~~G~~~Svr~ 248 (900)
T PLN03202 169 VEISFAAKIPMQAIANALRGQESENSQDALRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFVDLGGGVLGCRGFHSSFRT 248 (900)
T ss_pred EEEEEccccCHHHHHHHHcCCCCCCcHHHHHHHHHHHhhhhhhCCCceeccccCCCCCcccccCCCceEEeeeeeeEeee
Confidence 223 478899999976533 56899999999999999999
Q ss_pred cCCceEEEe---------------------------------------ecEEEEeeCCCceeEEecCCCcccccC
Q 046499 88 TQMGMSLNM---------------------------------------GVKVEVAHGESKRYRVSGITSQPTKKL 123 (124)
Q Consensus 88 ~~~~l~LNv---------------------------------------g~kv~~~h~~~~~y~i~gls~~pa~~~ 123 (124)
++++|+||| |++|.++|.+. .|+|.+|+..+|.++
T Consensus 249 ~~~~l~LnvDvs~~~F~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~lkGl~V~t~~~~k-~yrI~~i~~~~a~~~ 322 (900)
T PLN03202 249 TQGGLSLNIDVSTTMIVQPGPVVDFLIANQNVRDPFQIDWSKAKRMLKNLRVKVSPSNQ-EYKITGLSEKPCKEQ 322 (900)
T ss_pred ccCceEEeeeeeeeeeecCCcHHHHHHHhcCcCCccchhHHHHHHHhcCCEEEEecCCc-eEEEeeccCCCCcce
Confidence 999999999 89999999865 899999999888765
No 2
>PF08699 DUF1785: Domain of unknown function (DUF1785); InterPro: IPR014811 This region is found in argonaute [] proteins and often co-occurs with IPR003103 from INTERPRO and IPR003165 from INTERPRO. ; PDB: 1R6Z_P 3MJ0_A 4EI1_A 4F3T_A 4EI3_A 1R4K_A.
Probab=99.74 E-value=1.1e-18 Score=105.80 Aligned_cols=43 Identities=53% Similarity=0.977 Sum_probs=34.6
Q ss_pred eeecccccCCCCCCccCCCcEEEEeeeeeeeeccCCceEEEee
Q 046499 55 TVVGRSFFAPGFHKSEIGFGVECWKGFYQSLRPTQMGMSLNMG 97 (124)
Q Consensus 55 ~~vgrsff~~~~~~~~Lg~G~e~w~Gf~qSvR~~~~~l~LNvg 97 (124)
+.+|||||+++.+..+||+|+|+|+|||||+||++++|+|||-
T Consensus 1 ~~vgrsFF~~~~~~~~l~~Gle~~rG~~qSvRp~~~~l~lNvD 43 (52)
T PF08699_consen 1 TAVGRSFFPPSGGPVDLGGGLEAWRGFFQSVRPTQGGLLLNVD 43 (52)
T ss_dssp EEETTEEEE------EEETTEEEEEEEEEEEEEETTEEEEEEE
T ss_pred CccccccCCCCCCCccCCCcEEEeEeEEeeeEEcCCCCEEEEe
Confidence 4689999987643579999999999999999999999999983
No 3
>KOG1041 consensus Translation initiation factor 2C (eIF-2C) and related proteins [Translation, ribosomal structure and biogenesis]
Probab=99.66 E-value=3.5e-16 Score=138.55 Aligned_cols=117 Identities=37% Similarity=0.612 Sum_probs=89.2
Q ss_pred hccCCCCCCCceEeCCCceeecCCCCC--CCceEEEEecCCCC----------C--------------------------
Q 046499 8 HGKTHFNGCLPAYDGRKGFYTAGALPF--TSKDFNIKLIDRDE----------S-------------------------- 49 (124)
Q Consensus 8 ~~~~~f~~~~~ayDG~k~lyt~~~L~~--~~~~f~V~l~~~~~----------~-------------------------- 49 (124)
.+...|....++|||+++|||..+||. ...+|.|.+..+.. .
T Consensus 106 ~~~~~~~~~~~~YDg~~~lyt~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld 185 (876)
T KOG1041|consen 106 PELFELKSGGPAYDGQKTLYTKLELPEGVVTLDFDVISPKEWKKFKVSIKKVSEVVLTKLNGFIYTRGENAPRDANQTLD 185 (876)
T ss_pred cccccccCCcccccCCceeEeccccccccceEEEEecCCCCCcceEEEEEecccccccCccccccCccccCchhHHHHHH
Confidence 333447777888999999999888883 22223333322211 0
Q ss_pred ------Cccc-eeeecccccCCCC-CCccCCCcEEEEeeeeeeeeccCCceEEEe-------------------------
Q 046499 50 ------GDIN-CTVVGRSFFAPGF-HKSEIGFGVECWKGFYQSLRPTQMGMSLNM------------------------- 96 (124)
Q Consensus 50 ------~s~~-~~~vgrsff~~~~-~~~~Lg~G~e~w~Gf~qSvR~~~~~l~LNv------------------------- 96 (124)
++.. +..++++||..+. ....||+|.|+|.|||||+|+++++++||+
T Consensus 186 ~~~~~~~s~~~~~~~~~sff~~~~~~~~~l~~g~e~~~Gf~~s~r~~~~~~~l~id~~~~~F~k~~~~~~~l~~~~~~~~ 265 (876)
T KOG1041|consen 186 VVLREIATSQGLNNVGYSFFGNDTREPAKLGGGVEIWEGFHKSIRPTQGGLSLNIDVKTTAFYKGTPVIEFLKKILEIKT 265 (876)
T ss_pred HHHHhhhchhcccccchheecCCCCCccccCCCceeeeeeeeeeeeccCceEEeeeeeeeeeecCcchHHHHHhhhcCcc
Confidence 4444 8999999998622 255699999999999999999999999999
Q ss_pred ----------------ecEEEEeeCCCc-eeEEecCCCcccccCC
Q 046499 97 ----------------GVKVEVAHGESK-RYRVSGITSQPTKKLK 124 (124)
Q Consensus 97 ----------------g~kv~~~h~~~~-~y~i~gls~~pa~~~~ 124 (124)
||+|+++|++.. .|+|.+|+..||++++
T Consensus 266 ~~~~~~~~~~~~~~lkgL~v~~~h~~~~r~~~i~~l~~~~a~~~~ 310 (876)
T KOG1041|consen 266 RAFHKDRPLDIKKALKGLKVYVTHGKRKRKIKIMGLSKKPAKNTT 310 (876)
T ss_pred cccccccchhHHHHhhCcEEEEecccCcceEEEecccCCcccCce
Confidence 899999995544 8999999999999874
No 4
>KOG1042 consensus Germ-line stem cell division protein Hiwi/Piwi; negative developmental regulator [Cell cycle control, cell division, chromosome partitioning]
Probab=98.23 E-value=1e-06 Score=76.18 Aligned_cols=115 Identities=24% Similarity=0.419 Sum_probs=81.7
Q ss_pred HHHHhhccCCCCCCCceEeCCCceeecCCCCC----------CCceEEEEecCCCC-----C--------------Cccc
Q 046499 3 QLLEKHGKTHFNGCLPAYDGRKGFYTAGALPF----------TSKDFNIKLIDRDE-----S--------------GDIN 53 (124)
Q Consensus 3 ~l~~~~~~~~f~~~~~ayDG~k~lyt~~~L~~----------~~~~f~V~l~~~~~-----~--------------~s~~ 53 (124)
.++.+|. +.+ +.-.|||| .+||..+++.. ++.++.++++..+. + -..+
T Consensus 131 ~~L~~h~-~li-g~~~~FDG-~iLfl~~k~eq~~tel~~ks~~ge~i~I~ik~~~~~~~t~p~~iqv~NlI~RR~~k~L~ 207 (845)
T KOG1042|consen 131 ALLYNHT-DLI-GKGYAFDG-TILFLKEKFEQKQTELVSKSRDGELIKITIKLTNELPSTDPQCIQVFNLILRRSMKGLN 207 (845)
T ss_pred HHHHHhH-hhh-ccceeecc-eeehhhHHHhhhhheeecccCCCceEEEEEEEeccccCCChhHHHHHHHHHHHHHhhcc
Confidence 3555653 444 45679999 89999999864 23456666654432 1 1246
Q ss_pred eeeecccccCCCCCCccCC-CcEEEEeeeeeeeeccCCceEEEe-----------------------------------e
Q 046499 54 CTVVGRSFFAPGFHKSEIG-FGVECWKGFYQSLRPTQMGMSLNM-----------------------------------G 97 (124)
Q Consensus 54 ~~~vgrsff~~~~~~~~Lg-~G~e~w~Gf~qSvR~~~~~l~LNv-----------------------------------g 97 (124)
...+||+||.+.. +.+|. .-+++|.||-.|||..+..++|++ |
T Consensus 208 L~qigRnyynp~~-~i~ip~~km~lwPGy~tSIrq~E~~illctei~hKvmR~ETvy~~m~~~~~~~~~~qe~~~~~~~g 286 (845)
T KOG1042|consen 208 LTQIGRNYYDPRA-KIEIPEFKMSLWPGYETSIRQHENDILLCTEISHKVMRTETVYDIMRSCQHNTQRFQETVNKNVIG 286 (845)
T ss_pred HHHhhhccCCCCc-ccccccccceecCcchhHHHHhhhceeeehhhhhhHhhhhHHHHHHHHHhhCHHHHHHHHHHHhcc
Confidence 6789999998764 66776 578999999999999999999998 7
Q ss_pred cEEEEeeCCCceeEEecC--CCccccc
Q 046499 98 VKVEVAHGESKRYRVSGI--TSQPTKK 122 (124)
Q Consensus 98 ~kv~~~h~~~~~y~i~gl--s~~pa~~ 122 (124)
+-|-+.+-+. .|||..+ +..|.++
T Consensus 287 livLT~YNNk-tyriddvD~~~tP~st 312 (845)
T KOG1042|consen 287 LIVLTRYNNK-TYRIDDVDFSQTPLST 312 (845)
T ss_pred eEEEEecCCc-eeeeeccccCcCccce
Confidence 8777766443 7888754 4445443
No 5
>cd02825 PAZ PAZ domain, named PAZ after the proteins Piwi Argonaut and Zwille. PAZ is found in two families of proteins that are essential components of RNA-mediated gene-silencing pathways, including RNA interference, the piwi and Dicer families. PAZ functions as a nucleic-acid binding domain, with a strong preference for single-stranded nucleic acids (RNA or DNA) or RNA duplexes with single-stranded 3' overhangs. It has been suggested that the PAZ domain provides a unique mode for the recognition of the two 3'-terminal nucleotides in single-stranded nucleic acids and buries the 3' OH group, and that it might recognize characteristic 3' overhangs in siRNAs within RISC (RNA-induced silencing) and other complexes. This parent model also contains structures of an archaeal PAZ domain.
Probab=92.80 E-value=0.081 Score=36.20 Aligned_cols=26 Identities=35% Similarity=0.440 Sum_probs=22.6
Q ss_pred ecEEEEeeCCCc-eeEEecCCCccccc
Q 046499 97 GVKVEVAHGESK-RYRVSGITSQPTKK 122 (124)
Q Consensus 97 g~kv~~~h~~~~-~y~i~gls~~pa~~ 122 (124)
|++|+++|++.. .|+|.+++..+|.+
T Consensus 35 g~~V~~~h~~~~r~y~i~~i~~~~a~~ 61 (115)
T cd02825 35 GLKVEDTHNPLNRVYRPDGETRLKAPS 61 (115)
T ss_pred CCEEEEecCCCceEEEEeeEECCCChh
Confidence 999999998544 89999999988875
No 6
>cd02846 PAZ_argonaute_like PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille. PAZ is found in two families of proteins that are essential components of RNA-mediated gene-silencing pathways, including RNA interference, the Piwi and Dicer families. PAZ functions as a nucleic acid binding domain, with a strong preference for single-stranded nucleic acids (RNA or DNA) or RNA duplexes with single-stranded 3' overhangs. It has been suggested that the PAZ domain provides a unique mode for the recognition of the two 3'-terminal nucleotides in single-stranded nucleic acids and buries the 3' OH group, and that it might recognize characteristic 3' overhangs in siRNAs within RISC (RNA-induced silencing) and other complexes.
Probab=91.28 E-value=0.2 Score=33.80 Aligned_cols=27 Identities=33% Similarity=0.816 Sum_probs=22.4
Q ss_pred ecEEEEeeCCCc--eeEEecCCCcccccC
Q 046499 97 GVKVEVAHGESK--RYRVSGITSQPTKKL 123 (124)
Q Consensus 97 g~kv~~~h~~~~--~y~i~gls~~pa~~~ 123 (124)
|++|+++|++.. .|+|.||+..++.++
T Consensus 34 gl~v~~~~~~~~~r~~~i~~l~~~~~~~~ 62 (114)
T cd02846 34 GLKVEVTHRGNTNRKYKIKGLSAEPASQQ 62 (114)
T ss_pred CCEEEEEcCCCCCceEEEeeccCCCccce
Confidence 999999998532 799999999887544
No 7
>PF02170 PAZ: PAZ domain; InterPro: IPR003100 This domain is named after the proteins Piwi Argonaut and Zwille. It is also found in the CAF protein from Arabidopsis thaliana. The function of the domain is unknown but has been found in the middle region of a number of members of the Argonaute protein family, which also contain the Piwi domain (IPR003165 from INTERPRO) in their C-terminal region []. Several members of this family have been implicated in the development and maintenance of stem cells through the RNA-mediated gene-quelling mechanisms associated with the protein DICER. ; GO: 0005515 protein binding; PDB: 1R6Z_P 1T2R_A 1T2S_A 3MJ0_A 1VYN_A 3O3I_X 2L5C_A 3O6E_X 3O7V_X 2L5D_A ....
Probab=84.49 E-value=0.47 Score=32.96 Aligned_cols=27 Identities=30% Similarity=0.607 Sum_probs=23.2
Q ss_pred ecEEEEeeCCCc-eeEEecCCCcccccC
Q 046499 97 GVKVEVAHGESK-RYRVSGITSQPTKKL 123 (124)
Q Consensus 97 g~kv~~~h~~~~-~y~i~gls~~pa~~~ 123 (124)
|++|.++|++.. .|+|.+++..++.+.
T Consensus 31 g~~V~~~~~~~~r~~~I~~i~~~~~~~~ 58 (135)
T PF02170_consen 31 GLKVTTTYNNNKRTYKIKGISFDPAPES 58 (135)
T ss_dssp TEEEEETTTTCCEEEEEEEEEEEETTTS
T ss_pred CcEEEEecCCCceEEEEeEEECCCCcce
Confidence 899999999865 899999998877653
No 8
>cd02845 PAZ_piwi_like PAZ domain, Piwi_like subfamily. In multi-cellular organisms, the Piwi protein appears to be essential for the maintenance of germline stem cells. In the Drosophila male germline, Piwi was shown to be involved in the silencing of retrotransposons in the male gametes. The Piwi proteins share their domain architecture with other members of the argonaute family. The PAZ domain has been named after the proteins Piwi, Argonaut, and Zwille. PAZ is found in two families of proteins that are essential components of RNA-mediated gene-silencing pathways, including RNA interference, the Piwi and Dicer families. PAZ functions as a nucleic acid binding domain, with a strong preference for single-stranded nucleic acids (RNA or DNA) or RNA duplexes with single-stranded 3' overhangs. It has been suggested that the PAZ domain provides a unique mode for the recognition of the two 3'-terminal nucleotides in single-stranded nucleic acids and buries the 3' OH group, and that it might
Probab=77.06 E-value=2.7 Score=28.98 Aligned_cols=25 Identities=24% Similarity=0.268 Sum_probs=20.0
Q ss_pred ecEEEEeeCCCceeEEecCCCccccc
Q 046499 97 GVKVEVAHGESKRYRVSGITSQPTKK 122 (124)
Q Consensus 97 g~kv~~~h~~~~~y~i~gls~~pa~~ 122 (124)
|+.|.++|.+. .|+|.+|+..++.+
T Consensus 30 g~~V~t~yn~k-~Y~I~~I~~~~~p~ 54 (117)
T cd02845 30 GSIVLTRYNNK-TYRIDDIDFDKTPL 54 (117)
T ss_pred CCEEEEeeCCe-EEEEeEecCCCCcc
Confidence 89999999533 89999999766543
No 9
>cd02844 PAZ_CAF_like PAZ domain, CAF_like subfamily. CAF (for carpel factory) is a plant homolog of Dicer. CAF has been implicated in flower morphogenesis and in early Arabidopsis development and might function through posttranscriptional regulation of specific mRNA molecules. PAZ domains are named after the proteins Piwi, Argonaut, and Zwille. PAZ is found in two families of proteins that are essential components of RNA-mediated gene-silencing pathways, including RNA interference, the Piwi and Dicer families. PAZ functions as a nucleic-acid binding domain, with a strong preference for single-stranded nucleic acids (RNA or DNA) or RNA duplexes with single-stranded 3' overhangs. It has been suggested that the PAZ domain provides a unique mode for the recognition of the two 3'-terminal nucleotides in single-stranded nucleic acids and buries the 3' OH group, and that it might recognize characteristic 3' overhangs in siRNAs within RISC (RNA-induced silencing) and other complexes.
Probab=66.17 E-value=6 Score=28.07 Aligned_cols=23 Identities=30% Similarity=0.420 Sum_probs=18.6
Q ss_pred ecEEEEeeCCCceeEEecCCCcccc
Q 046499 97 GVKVEVAHGESKRYRVSGITSQPTK 121 (124)
Q Consensus 97 g~kv~~~h~~~~~y~i~gls~~pa~ 121 (124)
|+.|.++|.+. .|+|.+++ .++.
T Consensus 33 g~~V~t~hn~r-~Y~I~~i~-~~~p 55 (135)
T cd02844 33 GSVVTAPHNGR-FYVISGIL-DLNA 55 (135)
T ss_pred CCEEEEcCCCc-EEEEEEEc-CCCc
Confidence 89999999744 89999998 5443
No 10
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=46.49 E-value=22 Score=28.61 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=28.1
Q ss_pred CcEEEEe--eeeeeeeccCCceEEEe---------ecEEEEeeC
Q 046499 73 FGVECWK--GFYQSLRPTQMGMSLNM---------GVKVEVAHG 105 (124)
Q Consensus 73 ~G~e~w~--Gf~qSvR~~~~~l~LNv---------g~kv~~~h~ 105 (124)
+|||+.+ |-.-+|.|..+.+.+|| |.-..+.||
T Consensus 214 ~GLQv~~~dg~Wi~V~P~p~a~vVNiGD~l~~lSNG~ykSv~HR 257 (322)
T KOG0143|consen 214 GGLQVFTKDGKWIDVPPIPGAFVVNIGDMLQILSNGRYKSVLHR 257 (322)
T ss_pred CceEEEecCCeEEECCCCCCCEEEEcccHHhHhhCCcccceEEE
Confidence 6999996 89999999998899999 666666674
No 11
>PF09261 Alpha-mann_mid: Alpha mannosidase, middle domain; InterPro: IPR015341 Members of this entry belong to the glycosyl hydrolase family 38, This domain, which is found in the central region adopts a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. The domain is predominantly found in the enzyme alpha-mannosidase []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0008270 zinc ion binding; PDB: 1O7D_C 3LVT_A 3CZN_A 2FYV_A 3D50_A 3EJU_A 3EJS_A 3DX3_A 3BVX_A 3BUQ_A ....
Probab=39.93 E-value=7.9 Score=24.51 Aligned_cols=11 Identities=64% Similarity=1.555 Sum_probs=7.8
Q ss_pred EEEeeeeeeeec
Q 046499 76 ECWKGFYQSLRP 87 (124)
Q Consensus 76 e~w~Gf~qSvR~ 87 (124)
|.|+|+|.| ||
T Consensus 1 e~~~G~~tS-r~ 11 (80)
T PF09261_consen 1 EYWTGYYTS-RP 11 (80)
T ss_dssp EES-GGGCS-TH
T ss_pred CCcceeeeC-HH
Confidence 689999987 44
No 12
>PLN02485 oxidoreductase
Probab=35.64 E-value=31 Score=27.58 Aligned_cols=24 Identities=13% Similarity=0.084 Sum_probs=21.5
Q ss_pred CcEEEE--eeeeeeeeccCCceEEEe
Q 046499 73 FGVECW--KGFYQSLRPTQMGMSLNM 96 (124)
Q Consensus 73 ~G~e~w--~Gf~qSvR~~~~~l~LNv 96 (124)
+|||++ -|=+..|.|..+.+.+||
T Consensus 226 ~GLqV~~~~g~Wi~V~p~pg~~vVNi 251 (329)
T PLN02485 226 TALQVRNLSGEWIWAIPIPGTFVCNI 251 (329)
T ss_pred CeeeEEcCCCcEEECCCCCCcEEEEh
Confidence 799998 478899999988999999
No 13
>PRK15318 intimin-like protein SinH; Provisional
Probab=33.33 E-value=29 Score=31.21 Aligned_cols=28 Identities=25% Similarity=0.827 Sum_probs=20.7
Q ss_pred eeccc-ccCCCCC--CccCCCcEEEEeeeee
Q 046499 56 VVGRS-FFAPGFH--KSEIGFGVECWKGFYQ 83 (124)
Q Consensus 56 ~vgrs-ff~~~~~--~~~Lg~G~e~w~Gf~q 83 (124)
++|-| ||+.+.. ...+|-|.|+|+.|+.
T Consensus 171 MlG~NaFyD~d~s~~h~R~GlGaE~w~dyLk 201 (730)
T PRK15318 171 LLGGNIFYDYDFTRGHRRLGLGTEAWTDYLK 201 (730)
T ss_pred EEEeEEEEccCCCCCcceeeeeeEEEecceE
Confidence 46766 8876543 4568999999998764
No 14
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=33.16 E-value=53 Score=26.63 Aligned_cols=33 Identities=21% Similarity=0.370 Sum_probs=26.2
Q ss_pred CcEEEEe-eeeeeeeccCCceEEEe---------ecEEEEeeC
Q 046499 73 FGVECWK-GFYQSLRPTQMGMSLNM---------GVKVEVAHG 105 (124)
Q Consensus 73 ~G~e~w~-Gf~qSvR~~~~~l~LNv---------g~kv~~~h~ 105 (124)
+|||+++ |=...|.|..+.+.+|| |.--.+.||
T Consensus 234 ~GLQV~~~g~Wi~V~p~pgalvVNiGD~L~~~TNG~~kSt~HR 276 (348)
T PLN02912 234 SGLQVFKDGKWIAVNPIPNTFIVNLGDQMQVISNDKYKSVLHR 276 (348)
T ss_pred CceEEEECCcEEECCCcCCeEEEEcCHHHHHHhCCEEEccccc
Confidence 7999976 67888888889999999 555555665
No 15
>PLN02704 flavonol synthase
Probab=32.48 E-value=50 Score=26.52 Aligned_cols=25 Identities=4% Similarity=0.264 Sum_probs=21.3
Q ss_pred CCcEEEEe-eeeeeeeccCCceEEEe
Q 046499 72 GFGVECWK-GFYQSLRPTQMGMSLNM 96 (124)
Q Consensus 72 g~G~e~w~-Gf~qSvR~~~~~l~LNv 96 (124)
.+|||+++ |=...|.|..+.+.+||
T Consensus 235 v~GLQV~~~g~Wi~V~p~pg~lvVNv 260 (335)
T PLN02704 235 VQGLQVFRDDHWFDVKYIPNALVIHI 260 (335)
T ss_pred CCceeEeECCEEEeCCCCCCeEEEEe
Confidence 37999965 67888999888999999
No 16
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=31.14 E-value=49 Score=26.67 Aligned_cols=25 Identities=16% Similarity=0.278 Sum_probs=21.9
Q ss_pred CCcEEEE---eeeeeeeeccCCceEEEe
Q 046499 72 GFGVECW---KGFYQSLRPTQMGMSLNM 96 (124)
Q Consensus 72 g~G~e~w---~Gf~qSvR~~~~~l~LNv 96 (124)
.+|||++ .|=+..|.|..+.+++||
T Consensus 229 v~GLQV~~~~~g~Wi~V~p~pg~~vVNi 256 (345)
T PLN02750 229 VGGLQISRRSDGEWIPVKPIPDAFIINI 256 (345)
T ss_pred CCceEEeecCCCeEEEccCCCCeEEEEh
Confidence 3799997 378889999999999999
No 17
>PLN02904 oxidoreductase
Probab=31.13 E-value=49 Score=26.94 Aligned_cols=33 Identities=12% Similarity=0.216 Sum_probs=26.5
Q ss_pred CcEEEEe--eeeeeeeccCCceEEEe---------ecEEEEeeC
Q 046499 73 FGVECWK--GFYQSLRPTQMGMSLNM---------GVKVEVAHG 105 (124)
Q Consensus 73 ~G~e~w~--Gf~qSvR~~~~~l~LNv---------g~kv~~~h~ 105 (124)
+|||++. |=...|.|..+.+.+|| |.--.+.||
T Consensus 244 ~GLQV~~~~g~Wi~V~p~pgalVVNiGD~Le~~TNG~~kSt~HR 287 (357)
T PLN02904 244 QGLQIMDCNKNWVCVPYIEGALIVQLGDQVEVMSNGIYKSVVHR 287 (357)
T ss_pred CeeeEEeCCCCEEECCCCCCeEEEEccHHHHHHhCCeeeccCCc
Confidence 7999997 67888999889999999 555556664
No 18
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=30.34 E-value=68 Score=26.16 Aligned_cols=33 Identities=18% Similarity=0.371 Sum_probs=26.5
Q ss_pred CcEEEEe-e--eeeeeeccCCceEEEe---------ecEEEEeeC
Q 046499 73 FGVECWK-G--FYQSLRPTQMGMSLNM---------GVKVEVAHG 105 (124)
Q Consensus 73 ~G~e~w~-G--f~qSvR~~~~~l~LNv---------g~kv~~~h~ 105 (124)
+|||++. | -+..|.|..+.+.+|| |.-..+.||
T Consensus 232 ~GLQV~~~~~~~Wi~Vpp~pgalVVNiGD~L~~~TNG~~kSt~HR 276 (358)
T PLN02515 232 GGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQ 276 (358)
T ss_pred CceEEEECCCCeEEECCCCCCeEEEEccHHHHHHhCCeeeeecce
Confidence 7999976 3 5888999989999999 555666675
No 19
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=29.07 E-value=57 Score=25.78 Aligned_cols=34 Identities=24% Similarity=0.327 Sum_probs=26.6
Q ss_pred CCcEEEEe---eeeeeeeccCCceEEEe---------ecEEEEeeC
Q 046499 72 GFGVECWK---GFYQSLRPTQMGMSLNM---------GVKVEVAHG 105 (124)
Q Consensus 72 g~G~e~w~---Gf~qSvR~~~~~l~LNv---------g~kv~~~h~ 105 (124)
.+|||++. |=.-.|.|..+.+.+|| |.=..+.||
T Consensus 186 ~~GLqV~~~~~g~Wi~V~p~pga~vVNiGD~l~~~TNG~~~St~HR 231 (300)
T PLN02365 186 VGGLEVMDPSSGEFVPVDPLPGTLLVNLGDVATAWSNGRLCNVKHR 231 (300)
T ss_pred cCceEEEECCCCeEEecCCCCCeEEEEhhHHHHHHhCCceecccce
Confidence 37899985 67888999988999999 555555564
No 20
>KOG1959 consensus Glycosyl hydrolase, family 38 - alpha-mannosidase [Carbohydrate transport and metabolism]
Probab=28.67 E-value=17 Score=33.50 Aligned_cols=18 Identities=28% Similarity=0.739 Sum_probs=14.8
Q ss_pred cEEEEeeeeeeeeccCCce
Q 046499 74 GVECWKGFYQSLRPTQMGM 92 (124)
Q Consensus 74 G~e~w~Gf~qSvR~~~~~l 92 (124)
-...|.|||.| ||+..|+
T Consensus 357 ~~syWTGyFTS-RPa~Kr~ 374 (996)
T KOG1959|consen 357 PHSYWTGYFTS-RPALKRF 374 (996)
T ss_pred CCcceeeeccc-cHHHHHH
Confidence 35799999998 9998653
No 21
>PTZ00273 oxidase reductase; Provisional
Probab=26.03 E-value=55 Score=25.96 Aligned_cols=34 Identities=18% Similarity=0.272 Sum_probs=26.4
Q ss_pred CCcEEEEe--eeeeeeeccCCceEEEe---------ecEEEEeeC
Q 046499 72 GFGVECWK--GFYQSLRPTQMGMSLNM---------GVKVEVAHG 105 (124)
Q Consensus 72 g~G~e~w~--Gf~qSvR~~~~~l~LNv---------g~kv~~~h~ 105 (124)
.+|||++. |=...|.|..+.+.+|| |.-..+.||
T Consensus 214 ~~GLqV~~~~g~Wi~V~p~pg~lvVNvGD~l~~~TnG~~kSt~HR 258 (320)
T PTZ00273 214 VGGLQVRNLSGEWMDVPPLEGSFVVNIGDMMEMWSNGRYRSTPHR 258 (320)
T ss_pred CCceEEECCCCCEEeCCCCCCeEEEEHHHHHHHHHCCeeeCCCcc
Confidence 37999984 77888999888999999 555555554
No 22
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=25.01 E-value=64 Score=25.88 Aligned_cols=24 Identities=17% Similarity=0.376 Sum_probs=20.1
Q ss_pred CcEEEEe------eeeeeeeccCCceEEEe
Q 046499 73 FGVECWK------GFYQSLRPTQMGMSLNM 96 (124)
Q Consensus 73 ~G~e~w~------Gf~qSvR~~~~~l~LNv 96 (124)
+|||++. |=...|.|..+.+.+||
T Consensus 220 ~GLQV~~~~~~~~g~Wi~Vpp~pg~~VVNi 249 (332)
T PLN03002 220 MGLQICKDKNAMPQKWEYVPPIKGAFIVNL 249 (332)
T ss_pred CceEEecCCCCCCCcEEECCCCCCeEEEEH
Confidence 7999986 35777888888999999
No 23
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=24.01 E-value=63 Score=26.33 Aligned_cols=33 Identities=18% Similarity=0.333 Sum_probs=25.6
Q ss_pred CcEEEEee--eeeeeeccCCceEEEe---------ecEEEEeeC
Q 046499 73 FGVECWKG--FYQSLRPTQMGMSLNM---------GVKVEVAHG 105 (124)
Q Consensus 73 ~G~e~w~G--f~qSvR~~~~~l~LNv---------g~kv~~~h~ 105 (124)
+|||+++. =.-.|.|..+.+.+|| |.-..+.||
T Consensus 247 ~GLQV~~~~~~Wi~V~p~pgalVVNiGD~lq~~SNg~~kS~~HR 290 (358)
T PLN02254 247 SGLQVFREGVGWVTVPPVPGSLVVNVGDLLHILSNGRFPSVLHR 290 (358)
T ss_pred CCceEECCCCEEEEcccCCCCEEEEhHHHHHHHhCCeeccccce
Confidence 79999754 4788999888999999 555555664
No 24
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=23.55 E-value=79 Score=25.55 Aligned_cols=24 Identities=13% Similarity=0.301 Sum_probs=21.1
Q ss_pred CcEEEE--eeeeeeeeccCCceEEEe
Q 046499 73 FGVECW--KGFYQSLRPTQMGMSLNM 96 (124)
Q Consensus 73 ~G~e~w--~Gf~qSvR~~~~~l~LNv 96 (124)
+|||++ .|=...|.|..+.+.+||
T Consensus 217 ~GLQV~~~~g~Wi~Vpp~pga~VVNi 242 (335)
T PLN02156 217 AGLQICVKDGTWVDVPPDHSSFFVLV 242 (335)
T ss_pred CceEEEeCCCCEEEccCCCCcEEEEh
Confidence 789997 477888999888999999
No 25
>COG5513 Predicted secreted protein [Function unknown]
Probab=22.88 E-value=2.7e+02 Score=19.34 Aligned_cols=58 Identities=9% Similarity=0.291 Sum_probs=32.7
Q ss_pred CceEEEEecCCCCC-------CccceeeecccccCCCCCCccCC-CcEEEEeeeeeeeeccCCceEEE
Q 046499 36 SKDFNIKLIDRDES-------GDINCTVVGRSFFAPGFHKSEIG-FGVECWKGFYQSLRPTQMGMSLN 95 (124)
Q Consensus 36 ~~~f~V~l~~~~~~-------~s~~~~~vgrsff~~~~~~~~Lg-~G~e~w~Gf~qSvR~~~~~l~LN 95 (124)
++.|.+.|+..+.. -+.+.....+.||..+....++| +|.-.|. ++.+.++.+++.++
T Consensus 26 ge~f~L~l~~NPtTGysWeL~~s~gl~l~~~d~~~~~~~e~~~G~~G~~~W~--i~av~~G~q~v~g~ 91 (113)
T COG5513 26 GEKFTLQLPENPTTGYSWELNTSEGLVLLREDYTVDPAEEGTVGSPGIHTWE--IRAVKQGTQQVEGT 91 (113)
T ss_pred CCceEEEecCCCccceEEEEecCCccEEEeccCccCCCcccccCCCceEEEE--EEeecCCceEEEEE
Confidence 45677777654311 13333444455665443355677 7888884 66666666555543
No 26
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=22.45 E-value=84 Score=25.46 Aligned_cols=24 Identities=17% Similarity=0.187 Sum_probs=20.0
Q ss_pred CcEEEEe-eeeeeeeccCCceEEEe
Q 046499 73 FGVECWK-GFYQSLRPTQMGMSLNM 96 (124)
Q Consensus 73 ~G~e~w~-Gf~qSvR~~~~~l~LNv 96 (124)
+|||+++ |-.-.|.|..+.+.+||
T Consensus 241 ~GLQV~~~g~Wi~V~p~pg~lVVNi 265 (348)
T PLN00417 241 EGLQFLKDGKWYKAPIVPDTILINV 265 (348)
T ss_pred CceeEeECCeEEECCCCCCcEEEEc
Confidence 7899854 66778888888999999
No 27
>PLN02947 oxidoreductase
Probab=20.39 E-value=1.2e+02 Score=24.90 Aligned_cols=24 Identities=17% Similarity=0.347 Sum_probs=20.9
Q ss_pred CcEEEE-eeeeeeeeccCCceEEEe
Q 046499 73 FGVECW-KGFYQSLRPTQMGMSLNM 96 (124)
Q Consensus 73 ~G~e~w-~Gf~qSvR~~~~~l~LNv 96 (124)
+|||++ .|=...|.|..+.+.+||
T Consensus 262 ~GLQV~~~g~Wi~V~p~pga~VVNv 286 (374)
T PLN02947 262 EGLQIMHAGRWVTVEPIPGSFVVNV 286 (374)
T ss_pred CCeeEeECCEEEeCCCCCCeEEEEe
Confidence 789986 577888999988999999
Done!