BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046504
(94 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q32NQ8|RNF10_XENLA RING finger protein 10 OS=Xenopus laevis GN=rnf10 PE=2 SV=1
Length = 756
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 1 KNTSVFCRVPLHFAMHKNYGHVKLWSVICSLIFNTFLHSEYGGPGTLLVLPFIDMADTLN 60
+ + F +VP +K YG + V F +EY GP + + ++ T
Sbjct: 75 QKSKTFNKVPPQRGGNKQYGMGRREEV-AETQRAEFSSAEYSGPKKINLNHLLNF--TFE 131
Query: 61 ERGLPGGPQAARAAV----KWAQRHVDKD 85
RG PGGP +A KWA + +K+
Sbjct: 132 SRGHPGGPHSANGHFGRRHKWANKPFNKE 160
>sp|O74369|CSS1_SCHPO Inositol phosphosphingolipids phospholipase C
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=css1 PE=1 SV=2
Length = 424
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 27 VICSLIFNTFLHSEYGGPGTLLVLPFIDMADTLNERGLPGGPQA 70
V C+L+++ F HS G G + F + ++N+ L G PQA
Sbjct: 63 VSCNLVYSRFFHSAAMGAGLAMFSKFPIIESSMNKYPLNGRPQA 106
>sp|P23162|3608L_ASFB7 Protein MGF 360-8L OS=African swine fever virus (strain Badajoz
1971 Vero-adapted) GN=BA71V-023 PE=3 SV=1
Length = 319
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 13 FAMHKNYGHVKLWSVICSLIFNTF--LHSEY 41
F ++ YGH+ +W ++C++ FN LH Y
Sbjct: 192 FFFYQTYGHLSMWRLMCAIYFNNVFDLHEIY 222
>sp|Q28QY7|SYC_JANSC Cysteine--tRNA ligase OS=Jannaschia sp. (strain CCS1) GN=cysS PE=3
SV=1
Length = 453
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Query: 8 RVPLHFAMHKNYGHVKLWSVICSLIFNTF---LHSEYGGPGTLLVLPFIDMADTLNERGL 64
RV L+ Y L + +++F+ L YG V F D+ D +N R L
Sbjct: 24 RVSLYLCGPTVYDRAHLGNARSAVVFDQLFRLLRHVYGAENVTFVRNFTDVDDKINARAL 83
Query: 65 PGGPQAARAAVKWAQRHVD 83
G + A + +Q ++D
Sbjct: 84 AEGREIADLTAETSQWYLD 102
>sp|P0C9N9|3608L_ASFM2 Protein MGF 360-8L OS=African swine fever virus (isolate
Tick/Malawi/Lil 20-1/1983) GN=Mal-027 PE=3 SV=1
Length = 319
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 16 HKNYGHVKLWSVICSLIFNTF--LHSEY 41
++ YGH+ +W ++C++ FN LH Y
Sbjct: 195 YQTYGHLNMWRLMCAIYFNNIFDLHEIY 222
>sp|P0C9S3|36021_ASFM2 Protein MGF 360-21R OS=African swine fever virus (isolate
Tick/Malawi/Lil 20-1/1983) GN=Mal-001 PE=3 SV=1
Length = 307
Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 16 HKNYGHVKLWSVICSLIFNTF-LHSEY 41
++ Y H K W +IC + +NTF LH Y
Sbjct: 153 YQKYKHFKDWRLICGVAYNTFDLHEIY 179
>sp|P0C9N6|3608L_ASFWA Protein MGF 360-8L OS=African swine fever virus (isolate
Warthog/Namibia/Wart80/1980) GN=War-028 PE=3 SV=1
Length = 319
Score = 30.0 bits (66), Expect = 4.9, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 16 HKNYGHVKLWSVICSLIFNTF--LHSEY 41
++ YGH+ +W ++C++ FN LH Y
Sbjct: 195 YQTYGHLSMWRLMCAIYFNNVFDLHEIY 222
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.469
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,510,669
Number of Sequences: 539616
Number of extensions: 1629365
Number of successful extensions: 2785
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2782
Number of HSP's gapped (non-prelim): 8
length of query: 94
length of database: 191,569,459
effective HSP length: 64
effective length of query: 30
effective length of database: 157,034,035
effective search space: 4711021050
effective search space used: 4711021050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)