Query 046506
Match_columns 310
No_of_seqs 118 out of 1212
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 12:48:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046506.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046506hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02590 probable tyrosine dec 100.0 7.5E-52 1.6E-56 390.5 31.6 290 1-304 244-533 (539)
2 PLN02880 tyrosine decarboxylas 100.0 3E-50 6.5E-55 379.3 30.9 294 1-308 196-489 (490)
3 TIGR03799 NOD_PanD_pyr putativ 100.0 7.7E-46 1.7E-50 350.1 29.3 290 1-298 224-520 (522)
4 KOG0629 Glutamate decarboxylas 100.0 2.8E-41 6.1E-46 296.8 16.4 295 1-303 212-509 (510)
5 KOG0628 Aromatic-L-amino-acid/ 100.0 1.1E-39 2.3E-44 289.8 23.8 277 1-305 197-473 (511)
6 PF00282 Pyridoxal_deC: Pyrido 100.0 3.2E-40 6.9E-45 301.8 17.3 218 1-223 156-373 (373)
7 TIGR03811 tyr_de_CO2_Ent tyros 100.0 1E-36 2.2E-41 290.4 29.4 287 1-306 237-605 (608)
8 TIGR01788 Glu-decarb-GAD gluta 100.0 1.5E-37 3.3E-42 288.2 23.2 265 1-304 153-430 (431)
9 PLN02263 serine decarboxylase 100.0 3.5E-35 7.6E-40 271.1 22.6 245 1-303 193-443 (470)
10 COG0076 GadB Glutamate decarbo 100.0 3.8E-35 8.2E-40 272.9 20.9 274 1-301 172-447 (460)
11 PLN03032 serine decarboxylase; 100.0 1.1E-34 2.5E-39 263.9 22.0 241 1-299 126-372 (374)
12 PRK02769 histidine decarboxyla 100.0 4.8E-34 1E-38 261.5 23.7 244 1-303 125-372 (380)
13 COG0520 csdA Selenocysteine ly 100.0 1.2E-33 2.7E-38 259.9 22.9 252 5-302 134-404 (405)
14 cd06450 DOPA_deC_like DOPA dec 100.0 2.6E-31 5.7E-36 242.1 21.9 234 2-299 111-344 (345)
15 COG1104 NifS Cysteine sulfinat 100.0 5.4E-29 1.2E-33 222.1 21.8 237 6-306 114-380 (386)
16 PRK13520 L-tyrosine decarboxyl 100.0 1.5E-27 3.2E-32 219.6 21.8 249 2-302 120-370 (371)
17 PRK09295 bifunctional cysteine 100.0 1.2E-26 2.6E-31 216.2 22.1 252 3-302 134-403 (406)
18 TIGR01977 am_tr_V_EF2568 cyste 100.0 1.3E-26 2.7E-31 213.7 21.2 251 4-299 108-375 (376)
19 TIGR03812 tyr_de_CO2_Arch tyro 100.0 1.9E-26 4.1E-31 212.4 22.2 246 2-299 122-372 (373)
20 PLN02855 Bifunctional selenocy 99.9 3.5E-26 7.6E-31 214.1 23.2 256 3-305 143-420 (424)
21 PRK10874 cysteine sulfinate de 99.9 4.1E-26 8.9E-31 212.2 22.3 255 3-304 130-399 (401)
22 TIGR03392 FeS_syn_CsdA cystein 99.9 5E-26 1.1E-30 211.5 22.1 254 3-304 127-396 (398)
23 TIGR01814 kynureninase kynuren 99.9 8.1E-26 1.7E-30 210.5 23.6 247 14-301 146-405 (406)
24 PF00266 Aminotran_5: Aminotra 99.9 5E-26 1.1E-30 209.5 19.1 245 5-293 111-371 (371)
25 TIGR01979 sufS cysteine desulf 99.9 1.8E-25 4E-30 208.0 22.2 254 3-304 129-402 (403)
26 TIGR03402 FeS_nifS cysteine de 99.9 4.9E-25 1.1E-29 203.5 23.1 241 6-306 109-375 (379)
27 TIGR03403 nifS_epsilon cystein 99.9 7.6E-25 1.7E-29 202.4 22.9 243 5-306 112-378 (382)
28 PLN02651 cysteine desulfurase 99.9 6.1E-25 1.3E-29 201.8 19.3 186 6-224 111-304 (364)
29 KOG1383 Glutamate decarboxylas 99.9 8.7E-25 1.9E-29 195.5 17.9 260 1-305 185-448 (491)
30 TIGR01976 am_tr_V_VC1184 cyste 99.9 3.8E-24 8.3E-29 198.7 20.5 242 3-297 125-397 (397)
31 cd06453 SufS_like Cysteine des 99.9 4.5E-24 9.9E-29 196.6 20.4 246 4-297 110-373 (373)
32 PRK03080 phosphoserine aminotr 99.9 1.9E-24 4.2E-29 199.2 17.5 250 4-306 111-376 (378)
33 TIGR02006 IscS cysteine desulf 99.9 2.1E-24 4.6E-29 200.7 16.8 242 6-305 115-379 (402)
34 TIGR02326 transamin_PhnW 2-ami 99.9 1.6E-23 3.5E-28 192.3 20.0 256 3-302 97-361 (363)
35 PLN02409 serine--glyoxylate am 99.9 1.4E-23 3E-28 195.0 19.0 259 3-304 103-373 (401)
36 cd06451 AGAT_like Alanine-glyo 99.9 2.4E-23 5.1E-28 190.6 18.7 253 3-301 93-355 (356)
37 PRK05367 glycine dehydrogenase 99.9 7.4E-23 1.6E-27 204.8 21.1 261 2-305 606-877 (954)
38 PRK04366 glycine dehydrogenase 99.9 6.3E-23 1.4E-27 194.3 18.6 259 3-305 178-450 (481)
39 PRK13580 serine hydroxymethylt 99.9 1.7E-22 3.7E-27 187.5 20.6 240 13-303 195-445 (493)
40 TIGR00461 gcvP glycine dehydro 99.9 2.9E-22 6.2E-27 197.7 23.1 261 2-305 594-869 (939)
41 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 9.2E-22 2E-26 182.1 25.1 260 3-304 119-382 (387)
42 PRK13479 2-aminoethylphosphona 99.9 1.9E-22 4.2E-27 185.5 20.0 261 3-304 99-364 (368)
43 PLN02414 glycine dehydrogenase 99.9 3.2E-22 7E-27 199.6 22.7 264 2-305 632-909 (993)
44 PRK02948 cysteine desulfurase; 99.9 2E-22 4.3E-27 186.3 19.5 244 4-308 109-379 (381)
45 PTZ00094 serine hydroxymethylt 99.9 5.5E-22 1.2E-26 186.9 21.2 237 13-303 158-408 (452)
46 KOG1549 Cysteine desulfurase N 99.9 7.1E-23 1.5E-27 183.7 14.2 247 4-306 152-421 (428)
47 COG0075 Serine-pyruvate aminot 99.9 8E-22 1.7E-26 177.4 20.0 258 2-304 98-364 (383)
48 PRK14012 cysteine desulfurase; 99.9 2.5E-22 5.5E-27 187.0 16.7 240 6-305 117-381 (404)
49 PLN02724 Molybdenum cofactor s 99.9 6.1E-22 1.3E-26 197.9 20.5 269 6-301 145-486 (805)
50 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 8.9E-22 1.9E-26 179.9 19.8 255 3-300 93-354 (355)
51 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 2.3E-20 5E-25 171.3 26.4 255 3-301 100-360 (361)
52 cd00613 GDC-P Glycine cleavage 99.9 2.4E-21 5.1E-26 180.0 18.4 243 13-297 136-398 (398)
53 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 3.7E-20 8E-25 170.4 24.7 257 3-303 107-368 (370)
54 COG2008 GLY1 Threonine aldolas 99.9 8.1E-21 1.7E-25 166.5 16.6 234 14-301 100-341 (342)
55 PRK12566 glycine dehydrogenase 99.9 1.7E-20 3.8E-25 184.2 19.5 258 3-305 608-878 (954)
56 COG0156 BioF 7-keto-8-aminopel 99.9 4.8E-20 1E-24 167.3 20.0 229 25-300 152-387 (388)
57 PRK05355 3-phosphoserine/phosp 99.8 6.3E-21 1.4E-25 174.4 12.4 234 13-302 116-357 (360)
58 TIGR01364 serC_1 phosphoserine 99.8 2E-20 4.3E-25 170.4 14.9 222 25-302 119-347 (349)
59 cd00611 PSAT_like Phosphoserin 99.8 9.8E-21 2.1E-25 173.2 12.9 241 3-301 106-354 (355)
60 TIGR03235 DNA_S_dndA cysteine 99.8 5.2E-20 1.1E-24 168.4 17.0 188 5-224 110-302 (353)
61 TIGR03531 selenium_SpcS O-phos 99.8 2.9E-19 6.2E-24 165.7 21.5 184 1-214 166-357 (444)
62 TIGR01366 serC_3 phosphoserine 99.8 6E-20 1.3E-24 168.2 14.2 235 13-303 110-360 (361)
63 PRK00451 glycine dehydrogenase 99.8 1.6E-19 3.5E-24 170.3 17.2 244 6-301 178-446 (447)
64 PLN02721 threonine aldolase 99.8 1.1E-18 2.3E-23 159.6 20.2 245 4-302 101-351 (353)
65 TIGR01822 2am3keto_CoA 2-amino 99.8 4.7E-18 1E-22 157.7 23.0 232 25-304 151-390 (393)
66 KOG1360 5-aminolevulinate synt 99.8 2E-18 4.4E-23 151.8 18.2 232 25-304 286-525 (570)
67 PRK07179 hypothetical protein; 99.8 3.6E-18 7.8E-23 159.2 19.6 225 25-304 167-399 (407)
68 PLN03226 serine hydroxymethylt 99.8 6.1E-18 1.3E-22 159.4 20.2 247 17-303 162-419 (475)
69 PRK05937 8-amino-7-oxononanoat 99.8 1.8E-17 3.9E-22 152.6 22.3 226 25-305 124-352 (370)
70 PRK13034 serine hydroxymethylt 99.8 1E-17 2.2E-22 156.3 20.6 235 15-303 145-392 (416)
71 cd06502 TA_like Low-specificit 99.8 2E-18 4.4E-23 156.7 15.4 241 5-299 93-337 (338)
72 TIGR01437 selA_rel uncharacter 99.8 8.4E-18 1.8E-22 154.2 18.8 228 13-300 127-362 (363)
73 KOG2862 Alanine-glyoxylate ami 99.8 1.2E-17 2.5E-22 142.8 17.9 258 3-303 111-382 (385)
74 cd00616 AHBA_syn 3-amino-5-hyd 99.8 1.3E-17 2.7E-22 152.4 19.2 247 3-298 75-352 (352)
75 KOG1368 Threonine aldolase [Am 99.8 4E-18 8.7E-23 144.9 13.4 242 3-302 116-368 (384)
76 cd06454 KBL_like KBL_like; thi 99.8 8.4E-17 1.8E-21 146.7 22.3 227 26-300 115-348 (349)
77 TIGR01821 5aminolev_synth 5-am 99.8 5.2E-17 1.1E-21 151.2 21.1 229 26-304 161-397 (402)
78 cd00378 SHMT Serine-glycine hy 99.8 4.4E-17 9.4E-22 151.7 19.3 245 4-302 128-384 (402)
79 COG1103 Archaea-specific pyrid 99.8 1.4E-16 3.1E-21 133.9 20.0 261 2-303 116-380 (382)
80 PRK09064 5-aminolevulinate syn 99.8 7.8E-17 1.7E-21 150.3 20.6 229 26-304 162-398 (407)
81 PRK00011 glyA serine hydroxyme 99.8 6.3E-17 1.4E-21 151.3 19.6 241 12-303 139-389 (416)
82 PLN02271 serine hydroxymethylt 99.8 9.6E-17 2.1E-21 150.1 19.6 256 4-302 265-539 (586)
83 PLN02955 8-amino-7-oxononanoat 99.8 1.4E-16 3.1E-21 148.0 20.6 224 25-304 233-462 (476)
84 PLN02822 serine palmitoyltrans 99.7 6.3E-16 1.4E-20 146.5 24.8 247 13-305 217-479 (481)
85 cd00609 AAT_like Aspartate ami 99.7 6E-17 1.3E-21 147.2 17.2 242 3-299 100-350 (350)
86 PRK13392 5-aminolevulinate syn 99.7 3.5E-16 7.6E-21 146.0 21.8 227 27-304 163-398 (410)
87 PRK06939 2-amino-3-ketobutyrat 99.7 1.3E-15 2.8E-20 141.4 23.6 231 26-304 156-394 (397)
88 PLN02483 serine palmitoyltrans 99.7 1.4E-15 3E-20 144.5 23.3 247 4-304 203-467 (489)
89 PRK05367 glycine dehydrogenase 99.7 3.3E-16 7.1E-21 157.4 18.9 210 47-298 208-437 (954)
90 KOG1359 Glycine C-acetyltransf 99.7 9.3E-16 2E-20 130.4 18.4 233 24-304 175-413 (417)
91 PRK05958 8-amino-7-oxononanoat 99.7 1.2E-15 2.5E-20 141.0 21.0 223 26-300 153-384 (385)
92 PRK13393 5-aminolevulinate syn 99.7 2.1E-15 4.6E-20 140.6 21.7 229 26-304 161-397 (406)
93 PRK07812 O-acetylhomoserine am 99.7 1.3E-15 2.8E-20 142.2 18.1 183 27-224 144-355 (436)
94 PRK08064 cystathionine beta-ly 99.7 1.4E-15 2.9E-20 140.8 18.1 158 5-208 115-274 (390)
95 TIGR01329 cysta_beta_ly_E cyst 99.7 8.4E-16 1.8E-20 141.6 16.6 157 6-208 109-267 (378)
96 TIGR00858 bioF 8-amino-7-oxono 99.7 4.2E-15 9E-20 136.0 20.9 223 26-298 130-360 (360)
97 PRK05764 aspartate aminotransf 99.7 3.8E-15 8.1E-20 138.3 20.8 250 3-303 132-391 (393)
98 PRK05613 O-acetylhomoserine am 99.7 2.2E-15 4.8E-20 140.7 19.0 181 5-209 131-327 (437)
99 COG1003 GcvP Glycine cleavage 99.7 2.2E-15 4.8E-20 134.5 17.9 261 2-305 173-449 (496)
100 PLN02414 glycine dehydrogenase 99.7 2.1E-15 4.6E-20 151.1 19.8 210 47-299 236-465 (993)
101 PRK08134 O-acetylhomoserine am 99.7 3E-15 6.4E-20 139.9 19.4 180 6-210 127-319 (433)
102 PRK08361 aspartate aminotransf 99.7 1.9E-15 4.1E-20 140.2 18.0 244 3-303 134-390 (391)
103 PRK08861 cystathionine gamma-s 99.7 4.2E-15 9.1E-20 137.0 20.0 163 26-224 126-307 (388)
104 TIGR01825 gly_Cac_T_rel pyrido 99.7 1.1E-14 2.3E-19 134.8 22.4 230 25-303 146-381 (385)
105 TIGR03588 PseC UDP-4-keto-6-de 99.7 5.1E-15 1.1E-19 136.8 19.4 262 3-300 86-379 (380)
106 PRK07504 O-succinylhomoserine 99.7 5.5E-15 1.2E-19 137.1 18.8 164 26-224 138-319 (398)
107 TIGR01328 met_gam_lyase methio 99.7 6.8E-15 1.5E-19 136.2 18.8 164 27-224 133-314 (391)
108 PRK13238 tnaA tryptophanase/L- 99.7 1.5E-14 3.3E-19 136.1 21.4 260 5-303 135-433 (460)
109 PRK08114 cystathionine beta-ly 99.7 5.9E-15 1.3E-19 135.7 18.1 172 6-224 125-317 (395)
110 PRK06108 aspartate aminotransf 99.7 5.7E-15 1.2E-19 136.5 18.2 245 3-301 125-380 (382)
111 PRK05968 hypothetical protein; 99.7 4.4E-15 9.4E-20 137.4 17.3 172 6-224 126-311 (389)
112 TIGR01141 hisC histidinol-phos 99.7 9E-15 2E-19 133.4 19.0 229 3-298 112-346 (346)
113 PLN02509 cystathionine beta-ly 99.7 6.6E-15 1.4E-19 138.1 18.5 148 26-209 205-354 (464)
114 COG3844 Kynureninase [Amino ac 99.6 9E-15 2E-19 126.1 16.8 239 24-304 152-403 (407)
115 COG1168 MalY Bifunctional PLP- 99.6 2.2E-14 4.7E-19 126.7 19.5 242 12-302 130-385 (388)
116 cd00614 CGS_like CGS_like: Cys 99.6 7.6E-15 1.7E-19 135.1 17.5 174 5-224 102-294 (369)
117 COG0399 WecE Predicted pyridox 99.6 1.2E-14 2.6E-19 131.4 18.1 257 5-302 93-372 (374)
118 COG2873 MET17 O-acetylhomoseri 99.6 4.5E-14 9.8E-19 124.0 20.7 194 5-225 124-350 (426)
119 PRK06767 methionine gamma-lyas 99.6 5.8E-15 1.3E-19 136.5 16.0 163 26-224 134-309 (386)
120 PRK08056 threonine-phosphate d 99.6 2.6E-14 5.6E-19 131.0 20.1 236 3-301 111-353 (356)
121 PRK07269 cystathionine gamma-s 99.6 8.9E-15 1.9E-19 134.0 16.8 164 25-224 123-289 (364)
122 PLN03227 serine palmitoyltrans 99.6 7.1E-14 1.5E-18 129.5 22.8 223 45-305 139-384 (392)
123 PRK11658 UDP-4-amino-4-deoxy-L 99.6 2.3E-14 5E-19 132.3 19.3 259 3-301 90-377 (379)
124 PRK08248 O-acetylhomoserine am 99.6 1.8E-14 4E-19 134.6 18.6 181 5-210 126-319 (431)
125 PLN02452 phosphoserine transam 99.6 3.8E-15 8.1E-20 136.0 13.6 210 45-303 146-363 (365)
126 PRK08249 cystathionine gamma-s 99.6 3.7E-14 8.1E-19 131.4 19.6 163 26-224 137-317 (398)
127 PF00155 Aminotran_1_2: Aminot 99.6 1.9E-14 4.1E-19 132.0 17.4 243 3-297 110-363 (363)
128 PRK08045 cystathionine gamma-s 99.6 3.4E-14 7.4E-19 131.2 19.0 163 26-224 125-306 (386)
129 PRK07811 cystathionine gamma-s 99.6 4.6E-14 9.9E-19 130.6 19.5 163 26-224 134-315 (388)
130 PRK06290 aspartate aminotransf 99.6 7.3E-14 1.6E-18 130.2 20.8 252 3-304 147-406 (410)
131 PRK08133 O-succinylhomoserine 99.6 3.9E-14 8.4E-19 131.2 18.7 174 5-224 123-314 (390)
132 TIGR01265 tyr_nico_aTase tyros 99.6 1.5E-13 3.2E-18 128.1 22.6 256 3-303 137-401 (403)
133 cd00615 Orn_deC_like Ornithine 99.6 8.5E-16 1.8E-20 137.1 7.2 171 4-202 117-293 (294)
134 PRK06084 O-acetylhomoserine am 99.6 7.1E-14 1.5E-18 130.5 20.3 184 26-224 131-346 (425)
135 TIGR01365 serC_2 phosphoserine 99.6 1.2E-14 2.7E-19 132.8 14.7 261 2-301 100-371 (374)
136 PF00464 SHMT: Serine hydroxym 99.6 4.4E-14 9.6E-19 128.9 18.1 179 13-224 144-339 (399)
137 PRK09028 cystathionine beta-ly 99.6 5.1E-14 1.1E-18 129.8 18.7 160 28-224 136-314 (394)
138 PRK05994 O-acetylhomoserine am 99.6 4.3E-14 9.4E-19 132.2 18.3 166 27-209 137-317 (427)
139 PRK07503 methionine gamma-lyas 99.6 7.7E-14 1.7E-18 129.7 19.8 149 27-210 139-289 (403)
140 PRK08776 cystathionine gamma-s 99.6 1.1E-13 2.4E-18 128.5 20.6 163 26-224 133-314 (405)
141 PRK06234 methionine gamma-lyas 99.6 1.2E-13 2.5E-18 128.4 20.0 163 27-224 138-321 (400)
142 PRK07582 cystathionine gamma-l 99.6 5.1E-14 1.1E-18 129.3 17.1 149 45-223 133-300 (366)
143 PRK07671 cystathionine beta-ly 99.6 6.2E-14 1.3E-18 129.2 17.7 149 26-210 122-272 (377)
144 PRK06176 cystathionine gamma-s 99.6 6.4E-14 1.4E-18 129.2 17.4 149 26-210 122-272 (380)
145 PRK08247 cystathionine gamma-s 99.6 7.2E-14 1.6E-18 128.4 17.3 163 26-224 124-289 (366)
146 PRK06225 aspartate aminotransf 99.6 1.2E-13 2.7E-18 127.6 19.0 246 3-306 124-379 (380)
147 PRK07681 aspartate aminotransf 99.6 1.6E-13 3.4E-18 127.7 19.5 242 3-301 134-386 (399)
148 PRK07324 transaminase; Validat 99.6 2.1E-13 4.6E-18 125.7 20.2 243 3-303 121-370 (373)
149 PRK07810 O-succinylhomoserine 99.6 9.2E-14 2E-18 129.0 17.7 174 5-224 132-324 (403)
150 PRK00950 histidinol-phosphate 99.6 1.6E-13 3.5E-18 125.9 19.2 229 3-301 128-360 (361)
151 TIGR02080 O_succ_thio_ly O-suc 99.6 1.6E-13 3.5E-18 126.6 19.2 163 26-224 124-305 (382)
152 TIGR01325 O_suc_HS_sulf O-succ 99.6 8E-14 1.7E-18 128.7 17.1 173 5-223 116-306 (380)
153 TIGR01324 cysta_beta_ly_B cyst 99.6 1.6E-13 3.5E-18 126.3 18.8 159 29-224 126-303 (377)
154 PLN02242 methionine gamma-lyas 99.6 2.2E-13 4.8E-18 126.9 19.9 150 27-210 151-302 (418)
155 PRK06207 aspartate aminotransf 99.6 2.8E-13 6.1E-18 126.2 20.6 248 3-304 143-403 (405)
156 PRK05957 aspartate aminotransf 99.6 4.4E-13 9.5E-18 124.3 20.9 242 4-303 131-385 (389)
157 PRK10534 L-threonine aldolase; 99.6 8.6E-14 1.9E-18 126.3 15.7 227 13-301 100-331 (333)
158 PRK07309 aromatic amino acid a 99.6 5.1E-13 1.1E-17 123.9 21.1 247 3-304 132-389 (391)
159 PRK08574 cystathionine gamma-s 99.6 1.8E-13 3.8E-18 126.5 17.8 147 26-208 124-273 (385)
160 COG0436 Aspartate/tyrosine/aro 99.6 3.3E-13 7.2E-18 124.7 19.5 248 4-303 131-391 (393)
161 COG0112 GlyA Glycine/serine hy 99.6 3.2E-13 7E-18 119.8 18.2 236 13-302 141-389 (413)
162 PRK02731 histidinol-phosphate 99.6 3.1E-13 6.7E-18 124.3 19.0 235 4-302 126-365 (367)
163 PTZ00377 alanine aminotransfer 99.6 2.5E-12 5.4E-17 122.5 25.6 268 3-307 180-479 (481)
164 PRK07568 aspartate aminotransf 99.6 8.6E-13 1.9E-17 122.6 21.9 245 4-305 130-394 (397)
165 PRK03244 argD acetylornithine 99.6 1.1E-12 2.4E-17 121.9 22.6 219 27-305 172-396 (398)
166 cd00617 Tnase_like Tryptophana 99.6 5.3E-13 1.1E-17 124.3 20.3 257 13-304 115-409 (431)
167 PRK06358 threonine-phosphate d 99.6 8E-13 1.7E-17 121.0 21.2 235 3-301 110-353 (354)
168 TIGR03540 DapC_direct LL-diami 99.6 4E-13 8.7E-18 124.3 19.4 240 3-299 132-382 (383)
169 PRK06460 hypothetical protein; 99.6 3.3E-13 7.1E-18 124.4 18.5 149 45-224 131-298 (376)
170 TIGR01264 tyr_amTase_E tyrosin 99.6 8.5E-13 1.8E-17 122.9 21.4 257 3-303 136-399 (401)
171 TIGR03537 DapC succinyldiamino 99.6 2.9E-13 6.3E-18 123.7 18.0 238 2-299 103-349 (350)
172 PTZ00433 tyrosine aminotransfe 99.5 1.1E-12 2.5E-17 122.5 21.9 254 3-305 145-410 (412)
173 PRK07550 hypothetical protein; 99.5 5.9E-13 1.3E-17 123.3 19.6 245 3-300 131-384 (386)
174 PLN00145 tyrosine/nicotianamin 99.5 1.3E-12 2.8E-17 122.6 22.0 258 4-306 159-427 (430)
175 PRK15029 arginine decarboxylas 99.5 9E-13 2E-17 129.1 21.2 173 5-206 264-466 (755)
176 PLN02187 rooty/superroot1 99.5 1.2E-12 2.6E-17 123.8 21.5 258 3-306 172-441 (462)
177 PRK07682 hypothetical protein; 99.5 1.8E-13 3.9E-18 126.4 15.6 242 4-303 123-376 (378)
178 PRK14807 histidinol-phosphate 99.5 2E-12 4.4E-17 118.2 21.9 232 3-301 117-350 (351)
179 PRK00854 rocD ornithine--oxo-a 99.5 1.5E-12 3.3E-17 121.2 21.3 218 26-301 175-399 (401)
180 cd00610 OAT_like Acetyl ornith 99.5 2.5E-12 5.3E-17 120.1 22.7 243 13-300 159-412 (413)
181 PRK04073 rocD ornithine--oxo-a 99.5 1.3E-12 2.9E-17 121.4 20.7 214 27-301 175-395 (396)
182 PRK08912 hypothetical protein; 99.5 1.1E-12 2.5E-17 121.5 20.1 246 3-302 128-385 (387)
183 PRK05939 hypothetical protein; 99.5 1.4E-13 3E-18 127.5 13.8 193 6-224 109-321 (397)
184 PTZ00125 ornithine aminotransf 99.5 2.1E-12 4.6E-17 120.2 21.4 222 27-304 166-396 (400)
185 PRK07908 hypothetical protein; 99.5 8.1E-13 1.7E-17 120.8 18.2 229 3-302 113-346 (349)
186 PRK07777 aminotransferase; Val 99.5 1.5E-12 3.2E-17 120.7 19.5 246 3-301 126-384 (387)
187 PRK04635 histidinol-phosphate 99.5 5.6E-13 1.2E-17 122.1 16.4 229 3-300 119-352 (354)
188 PRK05387 histidinol-phosphate 99.5 3.2E-12 7E-17 116.9 20.8 232 3-302 118-352 (353)
189 PRK05942 aspartate aminotransf 99.5 1.8E-12 3.8E-17 120.5 19.2 189 4-223 139-334 (394)
190 PRK01688 histidinol-phosphate 99.5 5.6E-13 1.2E-17 121.9 15.5 230 2-298 115-351 (351)
191 PRK07050 cystathionine beta-ly 99.5 1.7E-12 3.7E-17 120.3 18.8 161 4-210 126-288 (394)
192 PLN02376 1-aminocyclopropane-1 99.5 1.6E-11 3.5E-16 116.9 25.9 254 6-303 164-438 (496)
193 PRK03158 histidinol-phosphate 99.5 1.5E-12 3.3E-17 119.4 18.0 231 3-300 122-358 (359)
194 TIGR02618 tyr_phenol_ly tyrosi 99.5 2.4E-12 5.1E-17 118.6 18.9 247 23-304 151-427 (450)
195 PRK06434 cystathionine gamma-l 99.5 9.5E-13 2.1E-17 121.1 16.1 171 5-224 126-309 (384)
196 PF01276 OKR_DC_1: Orn/Lys/Arg 99.5 2.3E-13 4.9E-18 124.8 11.8 177 5-212 125-328 (417)
197 PRK09265 aminotransferase AlaT 99.5 4.2E-12 9E-17 118.4 20.5 250 4-303 137-401 (404)
198 PRK08363 alanine aminotransfer 99.5 4.1E-12 8.8E-17 118.2 20.3 250 3-304 134-395 (398)
199 PRK13355 bifunctional HTH-doma 99.5 4.8E-12 1E-16 121.5 21.3 249 3-303 249-514 (517)
200 PRK07505 hypothetical protein; 99.5 5.4E-12 1.2E-16 117.5 21.1 225 26-303 167-399 (402)
201 TIGR01140 L_thr_O3P_dcar L-thr 99.5 1.7E-12 3.7E-17 117.7 17.2 209 27-298 115-330 (330)
202 PRK13237 tyrosine phenol-lyase 99.5 6.6E-12 1.4E-16 116.0 21.0 246 23-303 158-433 (460)
203 PLN02656 tyrosine transaminase 99.5 5.2E-12 1.1E-16 117.9 20.5 254 3-304 137-404 (409)
204 PLN00143 tyrosine/nicotianamin 99.5 9.5E-12 2.1E-16 116.1 21.7 255 3-305 138-406 (409)
205 PRK09082 methionine aminotrans 99.5 7.4E-13 1.6E-17 122.7 14.2 241 3-299 132-385 (386)
206 PRK09276 LL-diaminopimelate am 99.5 2.9E-12 6.2E-17 118.7 18.0 240 3-299 134-384 (385)
207 PLN00175 aminotransferase fami 99.5 3.5E-12 7.5E-17 119.2 18.6 244 3-302 156-412 (413)
208 PRK08960 hypothetical protein; 99.5 4.6E-12 9.9E-17 117.4 19.1 242 4-300 134-384 (387)
209 PLN02607 1-aminocyclopropane-1 99.5 2.3E-11 4.9E-16 114.6 23.9 253 6-303 165-437 (447)
210 PRK06836 aspartate aminotransf 99.5 7.1E-12 1.5E-16 116.4 20.3 241 3-304 137-392 (394)
211 PLN03026 histidinol-phosphate 99.5 4.9E-12 1.1E-16 116.9 18.9 233 3-300 144-379 (380)
212 PRK08068 transaminase; Reviewe 99.5 6.9E-12 1.5E-16 116.3 19.8 241 3-299 135-385 (389)
213 PRK06107 aspartate aminotransf 99.5 5.1E-12 1.1E-16 117.7 19.0 249 13-304 141-401 (402)
214 PF01041 DegT_DnrJ_EryC1: DegT 99.5 2.3E-12 5E-17 118.4 16.2 247 3-298 82-363 (363)
215 PRK06702 O-acetylhomoserine am 99.5 5.2E-12 1.1E-16 117.6 18.3 196 5-224 123-348 (432)
216 PRK05964 adenosylmethionine--8 99.4 1.5E-11 3.2E-16 115.3 21.2 227 27-303 185-422 (423)
217 PRK04870 histidinol-phosphate 99.4 4.7E-12 1E-16 116.0 17.5 230 3-300 122-355 (356)
218 TIGR01326 OAH_OAS_sulfhy OAH/O 99.4 3.5E-12 7.5E-17 119.2 16.9 179 5-210 119-311 (418)
219 TIGR02379 ECA_wecE TDP-4-keto- 99.4 8.1E-12 1.8E-16 115.1 19.0 256 4-301 89-375 (376)
220 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.4 8.2E-12 1.8E-16 115.2 18.5 254 3-301 88-374 (375)
221 PRK05166 histidinol-phosphate 99.4 1.1E-11 2.4E-16 114.2 19.2 235 3-301 129-369 (371)
222 TIGR01885 Orn_aminotrans ornit 99.4 6.6E-11 1.4E-15 110.2 24.5 222 27-301 172-400 (401)
223 PRK07337 aminotransferase; Val 99.4 8.7E-12 1.9E-16 115.6 18.4 242 4-300 132-386 (388)
224 PRK08153 histidinol-phosphate 99.4 1.6E-11 3.5E-16 113.0 20.1 239 4-306 126-368 (369)
225 PRK07683 aminotransferase A; V 99.4 1.7E-11 3.7E-16 113.7 20.3 244 3-305 130-385 (387)
226 PRK05967 cystathionine beta-ly 99.4 8.4E-12 1.8E-16 115.0 18.0 174 4-224 125-317 (395)
227 PRK15481 transcriptional regul 99.4 1.2E-11 2.5E-16 116.3 19.4 238 2-302 181-430 (431)
228 PF01053 Cys_Met_Meta_PP: Cys/ 99.4 3.9E-12 8.4E-17 116.9 15.6 165 26-225 128-312 (386)
229 PLN02450 1-aminocyclopropane-1 99.4 5.9E-11 1.3E-15 112.5 23.7 253 6-304 156-431 (468)
230 PRK11522 putrescine--2-oxoglut 99.4 3.8E-11 8.3E-16 113.1 22.2 233 27-307 214-455 (459)
231 PRK06348 aspartate aminotransf 99.4 2E-11 4.3E-16 113.1 20.0 243 3-300 130-382 (384)
232 PRK04781 histidinol-phosphate 99.4 4.1E-11 8.8E-16 110.2 21.9 236 3-301 118-361 (364)
233 PLN02624 ornithine-delta-amino 99.4 4.9E-11 1.1E-15 113.2 22.6 226 27-304 210-445 (474)
234 PF05889 SLA_LP_auto_ag: Solub 99.4 3.2E-12 7E-17 114.7 13.2 257 1-302 116-389 (389)
235 PRK12414 putative aminotransfe 99.4 1.2E-11 2.7E-16 114.5 17.6 239 4-299 132-383 (384)
236 PRK04311 selenocysteine syntha 99.4 1.5E-11 3.3E-16 115.5 18.3 108 6-128 191-308 (464)
237 TIGR03538 DapC_gpp succinyldia 99.4 2.5E-11 5.5E-16 112.7 19.6 238 3-300 133-392 (393)
238 PRK09147 succinyldiaminopimela 99.4 3.5E-11 7.5E-16 111.9 20.4 239 3-301 134-394 (396)
239 TIGR03246 arg_catab_astC succi 99.4 3.3E-11 7.1E-16 112.1 20.0 222 27-304 168-396 (397)
240 PRK07366 succinyldiaminopimela 99.4 1.8E-11 3.9E-16 113.5 18.3 242 3-300 133-387 (388)
241 PLN02231 alanine transaminase 99.4 1.7E-10 3.7E-15 110.7 25.0 268 3-307 233-531 (534)
242 KOG2040 Glycine dehydrogenase 99.4 1.9E-11 4.1E-16 114.0 17.6 266 2-304 646-919 (1001)
243 PRK08175 aminotransferase; Val 99.4 6.4E-11 1.4E-15 110.1 21.4 248 4-303 133-389 (395)
244 PF01212 Beta_elim_lyase: Beta 99.4 4.7E-13 1E-17 118.4 6.8 185 5-218 90-283 (290)
245 cd01494 AAT_I Aspartate aminot 99.4 1.2E-12 2.6E-17 106.3 8.3 112 3-126 59-170 (170)
246 PRK03321 putative aminotransfe 99.4 1.2E-11 2.5E-16 113.2 15.5 229 4-302 116-350 (352)
247 PRK13578 ornithine decarboxyla 99.4 3.1E-11 6.6E-16 117.4 18.9 179 5-211 234-446 (720)
248 TIGR03576 pyridox_MJ0158 pyrid 99.4 1.4E-11 2.9E-16 112.3 15.5 204 45-300 137-344 (346)
249 PRK15407 lipopolysaccharide bi 99.4 3.5E-11 7.6E-16 112.9 18.7 185 5-207 130-331 (438)
250 PRK03317 histidinol-phosphate 99.4 5.7E-11 1.2E-15 109.4 19.8 230 4-302 130-363 (368)
251 PRK03715 argD acetylornithine 99.4 6.5E-11 1.4E-15 109.8 20.2 221 26-304 167-394 (395)
252 PRK06425 histidinol-phosphate 99.4 6.3E-11 1.4E-15 107.6 19.7 229 2-301 95-331 (332)
253 TIGR00707 argD acetylornithine 99.4 7.4E-11 1.6E-15 108.9 20.4 213 27-300 159-378 (379)
254 PRK06855 aminotransferase; Val 99.4 1.6E-10 3.4E-15 108.7 22.8 265 13-304 144-430 (433)
255 PRK08636 aspartate aminotransf 99.4 2.1E-10 4.5E-15 107.0 23.3 254 3-303 136-400 (403)
256 COG0160 GabT 4-aminobutyrate a 99.4 1.5E-10 3.2E-15 106.9 21.8 235 27-304 205-446 (447)
257 TIGR00461 gcvP glycine dehydro 99.4 4.2E-11 9.1E-16 119.3 19.0 210 47-298 196-426 (939)
258 TIGR00474 selA seryl-tRNA(sec) 99.4 2E-11 4.3E-16 114.4 15.7 107 6-128 186-303 (454)
259 KOG1357 Serine palmitoyltransf 99.4 1.6E-11 3.5E-16 110.3 14.2 233 27-304 252-503 (519)
260 PRK09105 putative aminotransfe 99.4 7.2E-11 1.6E-15 108.8 19.0 229 2-301 135-368 (370)
261 PRK12462 phosphoserine aminotr 99.4 2.9E-11 6.3E-16 109.7 15.8 210 46-303 145-362 (364)
262 PRK02936 argD acetylornithine 99.3 7.9E-11 1.7E-15 108.8 18.6 213 27-300 156-376 (377)
263 COG0626 MetC Cystathionine bet 99.3 1.2E-10 2.5E-15 106.3 19.2 174 6-224 126-319 (396)
264 KOG0256 1-aminocyclopropane-1- 99.3 4.4E-10 9.6E-15 100.1 21.9 254 4-302 189-460 (471)
265 PRK01278 argD acetylornithine 99.3 1.6E-10 3.4E-15 107.3 20.3 218 26-303 163-388 (389)
266 PRK09264 diaminobutyrate--2-ox 99.3 4.7E-10 1E-14 105.2 23.2 228 27-305 181-418 (425)
267 COG4992 ArgD Ornithine/acetylo 99.3 2.2E-10 4.8E-15 103.1 19.5 222 27-306 173-401 (404)
268 PRK15400 lysine decarboxylase 99.3 7.9E-11 1.7E-15 114.5 17.8 258 5-302 254-558 (714)
269 PRK05093 argD bifunctional N-s 99.3 4.2E-10 9E-15 104.9 21.9 222 27-304 173-401 (403)
270 PF02347 GDC-P: Glycine cleava 99.3 5.8E-11 1.3E-15 109.0 15.5 234 3-297 175-429 (429)
271 PRK09148 aminotransferase; Val 99.3 2.5E-10 5.3E-15 106.5 19.8 249 3-305 133-392 (405)
272 PLN02760 4-aminobutyrate:pyruv 99.3 4.6E-10 9.9E-15 107.0 21.4 239 29-304 247-492 (504)
273 TIGR03372 putres_am_tran putre 99.3 9.9E-10 2.1E-14 103.0 23.2 226 27-300 207-441 (442)
274 PRK13360 omega amino acid--pyr 99.3 3.9E-10 8.4E-15 106.1 20.5 234 28-304 201-441 (442)
275 PRK02627 acetylornithine amino 99.3 3.6E-10 7.8E-15 105.0 20.1 217 27-304 171-395 (396)
276 PRK08117 4-aminobutyrate amino 99.3 7.5E-10 1.6E-14 104.1 22.4 235 27-306 191-432 (433)
277 PRK12381 bifunctional succinyl 99.3 2.3E-10 5.1E-15 106.7 18.7 224 26-305 171-401 (406)
278 PRK01533 histidinol-phosphate 99.3 1.3E-10 2.8E-15 106.9 16.7 228 3-304 122-356 (366)
279 PRK09221 beta alanine--pyruvat 99.3 7.6E-10 1.7E-14 104.2 21.8 234 28-304 204-444 (445)
280 TIGR02407 ectoine_ectB diamino 99.3 1.2E-09 2.5E-14 102.1 22.2 224 27-302 177-411 (412)
281 PRK05769 4-aminobutyrate amino 99.3 7E-10 1.5E-14 104.3 20.8 213 44-304 221-440 (441)
282 PLN02672 methionine S-methyltr 99.3 5.5E-10 1.2E-14 113.0 21.1 264 2-302 794-1079(1082)
283 PTZ00376 aspartate aminotransf 99.3 4.7E-10 1E-14 104.6 19.0 242 2-302 140-402 (404)
284 COG0079 HisC Histidinol-phosph 99.3 5.3E-10 1.1E-14 101.9 18.8 232 2-303 115-354 (356)
285 PRK15399 lysine decarboxylase 99.3 3.2E-10 6.9E-15 110.3 18.2 258 5-302 254-558 (713)
286 PRK02610 histidinol-phosphate 99.3 1.1E-09 2.5E-14 101.0 21.2 236 3-303 133-371 (374)
287 PRK06541 hypothetical protein; 99.3 1.2E-09 2.7E-14 103.1 21.6 240 29-304 208-456 (460)
288 PRK07049 methionine gamma-lyas 99.2 1.2E-09 2.7E-14 102.2 21.0 153 26-209 157-316 (427)
289 TIGR02617 tnaA_trp_ase tryptop 99.2 1.8E-09 3.8E-14 99.1 20.4 246 23-303 164-441 (467)
290 PRK04260 acetylornithine amino 99.2 1.2E-09 2.7E-14 100.8 19.8 214 26-300 153-374 (375)
291 PRK04612 argD acetylornithine 99.2 1.8E-09 3.9E-14 100.6 20.5 225 27-306 175-406 (408)
292 KOG0259 Tyrosine aminotransfer 99.2 2.3E-09 5E-14 94.8 19.5 255 3-303 167-433 (447)
293 COG1167 ARO8 Transcriptional r 99.2 1.4E-09 3.1E-14 102.8 19.1 247 3-305 196-457 (459)
294 PRK14809 histidinol-phosphate 99.2 2E-09 4.4E-14 98.6 19.8 227 4-301 124-355 (357)
295 KOG2467 Glycine/serine hydroxy 99.2 1.6E-09 3.4E-14 95.4 17.7 249 16-301 167-424 (477)
296 PRK06082 4-aminobutyrate amino 99.2 2.7E-09 5.8E-14 100.9 20.8 234 28-309 217-457 (459)
297 PRK06105 aminotransferase; Pro 99.2 3.1E-09 6.8E-14 100.4 21.1 242 28-306 204-452 (460)
298 PRK07678 aminotransferase; Val 99.2 3.3E-09 7.2E-14 100.1 20.9 237 30-304 201-450 (451)
299 PRK07392 threonine-phosphate d 99.2 4E-09 8.6E-14 96.9 20.8 234 3-301 114-357 (360)
300 PRK06173 adenosylmethionine--8 99.2 1.9E-09 4.2E-14 100.9 18.9 227 27-306 192-428 (429)
301 PRK05639 4-aminobutyrate amino 99.2 6E-09 1.3E-13 98.4 22.3 216 45-305 223-445 (457)
302 PRK08593 4-aminobutyrate amino 99.2 5.4E-09 1.2E-13 98.5 21.8 217 45-305 208-431 (445)
303 KOG0053 Cystathionine beta-lya 99.2 1.2E-09 2.7E-14 98.7 16.3 147 27-209 151-299 (409)
304 PRK00062 glutamate-1-semialdeh 99.2 2E-09 4.4E-14 100.9 18.5 236 26-304 182-425 (426)
305 PRK00615 glutamate-1-semialdeh 99.2 7.4E-09 1.6E-13 97.0 22.0 234 27-304 187-429 (433)
306 PRK06058 4-aminobutyrate amino 99.2 5.7E-09 1.2E-13 98.4 21.4 216 45-303 220-442 (443)
307 PRK08297 L-lysine aminotransfe 99.2 5.8E-09 1.3E-13 98.2 21.0 219 28-304 212-442 (443)
308 PRK07590 L,L-diaminopimelate a 99.2 2.1E-09 4.6E-14 100.4 18.0 234 13-300 157-408 (409)
309 PRK06062 hypothetical protein; 99.2 9.6E-09 2.1E-13 96.9 22.5 238 28-305 200-447 (451)
310 PLN02397 aspartate transaminas 99.2 3.6E-09 7.8E-14 99.2 19.1 238 3-302 159-420 (423)
311 PRK08360 4-aminobutyrate amino 99.1 1.8E-08 3.8E-13 94.9 23.0 234 28-306 189-429 (443)
312 PRK09257 aromatic amino acid a 99.1 6.1E-09 1.3E-13 96.9 19.6 238 3-300 137-395 (396)
313 KOG3846 L-kynurenine hydrolase 99.1 4.6E-09 9.9E-14 90.5 16.5 261 5-304 178-462 (465)
314 PRK05839 hypothetical protein; 99.1 8E-09 1.7E-13 95.4 19.5 229 3-301 126-372 (374)
315 PRK12403 putative aminotransfe 99.1 2.7E-08 5.8E-13 94.1 23.3 238 28-306 208-455 (460)
316 PRK06938 diaminobutyrate--2-ox 99.1 1.9E-08 4E-13 95.2 22.2 241 27-305 214-462 (464)
317 PRK06943 adenosylmethionine--8 99.1 1.4E-08 3E-13 95.9 21.2 228 28-304 208-447 (453)
318 TIGR00508 bioA adenosylmethion 99.1 4.9E-09 1.1E-13 98.3 18.1 223 27-302 193-425 (427)
319 PRK07865 N-succinyldiaminopime 99.1 8.4E-09 1.8E-13 94.8 19.4 203 45-298 149-363 (364)
320 PRK08637 hypothetical protein; 99.1 9.1E-09 2E-13 95.5 19.7 246 5-304 113-387 (388)
321 TIGR03251 LAT_fam L-lysine 6-t 99.1 1.6E-08 3.4E-13 95.0 21.4 216 28-299 205-430 (431)
322 PRK07480 putative aminotransfe 99.1 1.5E-08 3.2E-13 95.7 21.3 240 29-308 206-453 (456)
323 TIGR00699 GABAtrns_euk 4-amino 99.1 5.7E-09 1.2E-13 98.3 18.3 216 27-300 237-463 (464)
324 PLN02482 glutamate-1-semialdeh 99.1 1.3E-08 2.7E-13 96.4 20.5 234 27-303 232-473 (474)
325 PRK07482 hypothetical protein; 99.1 1.4E-08 3E-13 96.1 20.6 245 27-306 205-457 (461)
326 PRK07986 adenosylmethionine--8 99.1 5.8E-09 1.3E-13 97.7 17.7 224 27-302 190-422 (428)
327 PRK05965 hypothetical protein; 99.1 2.4E-08 5.3E-13 94.4 22.1 241 29-305 202-449 (459)
328 TIGR03542 DAPAT_plant LL-diami 99.1 5.4E-09 1.2E-13 97.4 17.5 230 12-300 152-401 (402)
329 TIGR03539 DapC_actino succinyl 99.1 9E-09 1.9E-13 94.4 18.6 203 45-297 143-356 (357)
330 PRK03967 histidinol-phosphate 99.1 1.4E-08 2.9E-13 92.5 19.3 222 3-303 111-334 (337)
331 PLN00144 acetylornithine trans 99.1 3.1E-08 6.7E-13 91.6 21.7 219 27-304 155-381 (382)
332 PRK07036 hypothetical protein; 99.1 2.4E-08 5.2E-13 94.6 21.4 236 29-305 207-454 (466)
333 PRK09440 avtA valine--pyruvate 99.1 1.2E-08 2.7E-13 95.5 19.1 227 24-305 167-413 (416)
334 PRK08088 4-aminobutyrate amino 99.1 3.4E-08 7.4E-13 92.7 22.1 233 28-304 184-424 (425)
335 TIGR00700 GABAtrnsam 4-aminobu 99.1 3.6E-08 7.8E-13 92.4 22.1 229 28-301 182-418 (420)
336 PRK14808 histidinol-phosphate 99.1 1.8E-08 3.9E-13 91.6 19.6 222 2-300 112-334 (335)
337 PRK12389 glutamate-1-semialdeh 99.1 2.3E-08 4.9E-13 93.9 20.6 232 27-303 186-427 (428)
338 TIGR00709 dat 2,4-diaminobutyr 99.1 3.5E-08 7.7E-13 93.0 22.0 227 45-308 207-440 (442)
339 PLN02368 alanine transaminase 99.1 1.1E-08 2.4E-13 95.3 18.2 192 3-220 172-392 (407)
340 TIGR00713 hemL glutamate-1-sem 99.1 1.9E-08 4.1E-13 94.4 19.9 236 27-303 181-422 (423)
341 PRK06777 4-aminobutyrate amino 99.1 5.5E-08 1.2E-12 91.1 22.9 230 27-301 182-419 (421)
342 PRK06149 hypothetical protein; 99.1 2.4E-08 5.1E-13 102.6 21.9 235 28-303 728-970 (972)
343 PRK06959 putative threonine-ph 99.0 2.8E-08 6.1E-13 90.5 19.5 200 47-307 133-337 (339)
344 PRK05664 threonine-phosphate d 99.0 2.7E-08 5.8E-13 90.3 19.3 219 3-303 103-328 (330)
345 PRK06148 hypothetical protein; 99.0 3.1E-08 6.7E-13 101.9 21.6 235 29-304 769-1011(1013)
346 TIGR03801 asp_4_decarbox aspar 99.0 2.1E-08 4.6E-13 95.4 18.9 268 13-306 210-519 (521)
347 PRK07481 hypothetical protein; 99.0 4.9E-08 1.1E-12 92.1 21.1 222 45-304 214-446 (449)
348 PRK07483 hypothetical protein; 99.0 6.6E-08 1.4E-12 91.1 21.0 242 29-305 186-439 (443)
349 PRK08354 putative aminotransfe 99.0 3.2E-08 7E-13 89.0 18.3 87 26-125 106-196 (311)
350 PRK09275 aspartate aminotransf 99.0 2.1E-08 4.7E-13 95.5 17.4 268 13-305 216-519 (527)
351 PRK07030 adenosylmethionine--8 99.0 1.1E-07 2.4E-12 90.0 21.8 239 28-304 201-447 (466)
352 COG3033 TnaA Tryptophanase [Am 99.0 8.4E-08 1.8E-12 84.5 18.6 247 23-303 166-444 (471)
353 PRK06931 diaminobutyrate--2-ox 99.0 1.3E-07 2.9E-12 89.4 21.6 225 45-307 226-458 (459)
354 PRK07495 4-aminobutyrate amino 99.0 3.1E-07 6.8E-12 86.1 23.9 233 28-305 183-423 (425)
355 PRK08742 adenosylmethionine--8 99.0 1.2E-07 2.6E-12 89.8 21.2 237 27-304 222-468 (472)
356 PRK09792 4-aminobutyrate trans 99.0 7.9E-08 1.7E-12 90.1 19.8 231 28-302 183-420 (421)
357 PRK05630 adenosylmethionine--8 99.0 6.3E-08 1.4E-12 90.6 18.9 210 45-303 201-420 (422)
358 PRK06917 hypothetical protein; 99.0 2.2E-07 4.7E-12 87.7 22.3 243 28-306 185-440 (447)
359 COG0001 HemL Glutamate-1-semia 98.9 9.7E-08 2.1E-12 87.1 18.3 239 27-305 186-430 (432)
360 KOG0257 Kynurenine aminotransf 98.9 1.5E-08 3.2E-13 91.0 12.4 192 4-223 135-344 (420)
361 COG1982 LdcC Arginine/lysine/o 98.9 7.1E-08 1.5E-12 90.8 17.3 244 13-298 134-403 (557)
362 PRK06916 adenosylmethionine--8 98.9 2.6E-07 5.7E-12 87.4 21.1 240 27-304 209-456 (460)
363 PRK06209 glutamate-1-semialdeh 98.9 1.7E-07 3.8E-12 88.0 18.7 224 27-305 173-407 (431)
364 COG3977 Alanine-alpha-ketoisov 98.9 2.1E-07 4.6E-12 80.2 17.3 227 23-304 166-412 (417)
365 KOG0630 Predicted pyridoxal-de 98.9 1.4E-08 3E-13 92.5 10.5 280 2-303 248-581 (838)
366 COG0403 GcvP Glycine cleavage 98.9 1.1E-07 2.4E-12 85.7 16.1 225 27-300 199-447 (450)
367 PRK07046 aminotransferase; Val 98.9 3.4E-07 7.5E-12 86.4 20.1 236 27-305 206-452 (453)
368 PRK04013 argD acetylornithine/ 98.9 3.1E-07 6.6E-12 84.3 19.1 208 27-305 151-362 (364)
369 PRK06918 4-aminobutyrate amino 98.9 9.8E-07 2.1E-11 83.5 23.1 219 45-306 220-446 (451)
370 KOG1358 Serine palmitoyltransf 98.8 1.2E-07 2.6E-12 84.4 14.0 241 25-304 207-466 (467)
371 KOG1404 Alanine-glyoxylate ami 98.8 5.1E-07 1.1E-11 80.5 17.2 226 29-297 199-432 (442)
372 COG1921 SelA Selenocysteine sy 98.8 4.6E-08 1E-12 88.2 10.1 111 4-132 129-241 (395)
373 COG0161 BioA Adenosylmethionin 98.8 1.1E-06 2.4E-11 81.2 18.8 237 28-306 200-446 (449)
374 PRK12566 glycine dehydrogenase 98.7 7E-07 1.5E-11 89.3 16.0 209 46-298 210-439 (954)
375 KOG0634 Aromatic amino acid am 98.6 3.9E-05 8.5E-10 69.6 24.7 261 3-303 165-466 (472)
376 KOG0633 Histidinol phosphate a 98.6 1.3E-05 2.9E-10 68.0 18.1 238 3-300 128-374 (375)
377 PLN02974 adenosylmethionine-8- 98.5 1.2E-05 2.6E-10 80.6 20.7 234 29-301 567-816 (817)
378 KOG1402 Ornithine aminotransfe 98.5 1.3E-05 2.8E-10 70.2 18.1 222 27-301 195-425 (427)
379 COG1932 SerC Phosphoserine ami 98.5 3.8E-06 8.2E-11 74.7 14.3 206 47-303 147-363 (365)
380 PF00202 Aminotran_3: Aminotra 98.2 2.2E-05 4.7E-10 71.6 13.3 95 29-128 164-262 (339)
381 KOG1401 Acetylornithine aminot 98.2 0.00024 5.2E-09 64.2 19.4 157 27-205 192-353 (433)
382 KOG1405 4-aminobutyrate aminot 98.2 8.2E-05 1.8E-09 65.9 15.7 220 26-303 253-483 (484)
383 PF03841 SelA: L-seryl-tRNA se 98.2 2E-06 4.4E-11 77.1 5.4 110 11-132 113-231 (367)
384 COG1448 TyrB Aspartate/tyrosin 98.0 0.00032 7E-09 63.0 15.8 232 6-300 140-395 (396)
385 KOG3843 Predicted serine hydro 98.0 1.4E-05 3.1E-10 68.0 5.8 169 6-201 123-293 (432)
386 PF12897 Aminotran_MocR: Alani 97.9 0.00029 6.3E-09 63.5 12.7 240 3-301 141-413 (425)
387 KOG0258 Alanine aminotransfera 97.5 0.019 4.2E-07 51.9 17.8 70 13-83 185-257 (475)
388 KOG1403 Predicted alanine-glyo 97.4 0.0098 2.1E-07 51.9 14.9 241 26-305 191-439 (452)
389 PF06838 Met_gamma_lyase: Meth 97.4 0.001 2.3E-08 59.6 8.8 114 4-134 125-245 (403)
390 KOG2790 Phosphoserine aminotra 96.8 0.038 8.2E-07 48.0 12.5 167 102-302 195-367 (370)
391 KOG2040 Glycine dehydrogenase 96.3 0.14 3.1E-06 49.4 14.1 212 47-298 250-478 (1001)
392 COG4100 Cystathionine beta-lya 95.3 0.036 7.9E-07 48.5 5.3 110 5-131 137-253 (416)
393 KOG1412 Aspartate aminotransfe 93.7 1.6 3.5E-05 38.8 11.8 221 24-304 161-406 (410)
394 KOG1411 Aspartate aminotransfe 93.7 0.49 1.1E-05 42.5 8.7 239 5-302 165-424 (427)
395 PF04864 Alliinase_C: Allinase 82.3 20 0.00042 32.6 10.4 202 45-300 138-362 (363)
396 smart00642 Aamy Alpha-amylase 75.9 6.5 0.00014 31.8 5.1 28 56-83 65-92 (166)
397 PF00128 Alpha-amylase: Alpha 66.6 3.9 8.5E-05 36.0 2.1 33 51-83 42-74 (316)
398 COG1954 GlpP Glycerol-3-phosph 65.7 7.3 0.00016 31.5 3.1 49 27-86 12-62 (181)
399 PRK09441 cytoplasmic alpha-amy 62.3 5.4 0.00012 38.2 2.3 28 55-82 75-102 (479)
400 COG0386 BtuE Glutathione perox 60.6 86 0.0019 25.1 8.8 97 10-115 25-133 (162)
401 cd01455 vWA_F11C1-5a_type Von 59.9 32 0.00069 28.6 6.0 53 29-81 95-149 (191)
402 COG0296 GlgB 1,4-alpha-glucan 59.2 7.1 0.00015 38.5 2.4 35 50-84 203-237 (628)
403 PRK04147 N-acetylneuraminate l 59.0 24 0.00053 31.3 5.7 72 4-79 3-78 (293)
404 cd00951 KDGDH 5-dehydro-4-deox 57.7 38 0.00081 30.0 6.7 57 23-79 15-74 (289)
405 COG0329 DapA Dihydrodipicolina 55.6 26 0.00056 31.3 5.3 56 24-79 20-78 (299)
406 COG1105 FruK Fructose-1-phosph 54.9 39 0.00084 30.4 6.1 59 24-83 109-168 (310)
407 COG0108 RibB 3,4-dihydroxy-2-b 54.6 38 0.00082 28.2 5.6 49 29-78 141-189 (203)
408 TIGR02402 trehalose_TreZ malto 53.1 9.6 0.00021 37.1 2.3 29 55-83 154-182 (542)
409 COG2870 RfaE ADP-heptose synth 53.0 38 0.00083 31.5 5.8 27 55-81 152-178 (467)
410 PRK12313 glycogen branching en 52.4 10 0.00022 37.7 2.4 28 56-83 215-242 (633)
411 PLN03244 alpha-amylase; Provis 51.2 11 0.00024 38.1 2.4 34 50-83 430-463 (872)
412 PRK13397 3-deoxy-7-phosphohept 51.2 77 0.0017 27.6 7.2 62 25-87 132-197 (250)
413 TIGR01361 DAHP_synth_Bsub phos 51.0 1.1E+02 0.0023 26.8 8.2 61 25-86 142-206 (260)
414 PRK05402 glycogen branching en 50.5 11 0.00024 38.2 2.3 29 55-83 309-337 (726)
415 PRK03620 5-dehydro-4-deoxygluc 49.7 54 0.0012 29.3 6.4 58 22-79 21-81 (303)
416 PRK10785 maltodextrin glucosid 49.4 11 0.00025 37.1 2.2 55 27-82 177-247 (598)
417 cd00950 DHDPS Dihydrodipicolin 49.4 52 0.0011 28.9 6.2 51 23-73 15-65 (284)
418 PRK11633 cell division protein 49.3 1E+02 0.0022 26.4 7.5 50 250-300 163-213 (226)
419 TIGR02026 BchE magnesium-proto 48.7 59 0.0013 31.3 6.9 62 12-84 39-102 (497)
420 PF00926 DHBP_synthase: 3,4-di 48.7 48 0.001 27.6 5.4 64 13-78 122-185 (194)
421 PLN00196 alpha-amylase; Provis 48.4 12 0.00025 35.4 2.0 28 55-82 86-113 (428)
422 PF02571 CbiJ: Precorrin-6x re 48.4 18 0.0004 31.4 3.1 26 58-83 50-75 (249)
423 cd00952 CHBPH_aldolase Trans-o 46.7 56 0.0012 29.3 6.0 55 24-78 24-81 (309)
424 PRK13396 3-deoxy-7-phosphohept 46.0 99 0.0021 28.4 7.4 62 25-87 218-284 (352)
425 PRK08057 cobalt-precorrin-6x r 45.8 20 0.00044 31.1 2.9 26 58-83 49-74 (248)
426 PF03796 DnaB_C: DnaB-like hel 45.6 1.3E+02 0.0028 26.0 8.0 57 25-81 111-177 (259)
427 TIGR01515 branching_enzym alph 45.2 15 0.00033 36.4 2.3 28 56-83 201-228 (613)
428 PRK12595 bifunctional 3-deoxy- 45.0 1E+02 0.0022 28.4 7.5 60 26-86 236-299 (360)
429 PF07131 DUF1382: Protein of u 44.2 56 0.0012 21.3 3.9 29 276-305 24-52 (61)
430 TIGR00506 ribB 3,4-dihydroxy-2 44.1 1.2E+02 0.0026 25.3 7.1 64 13-78 127-190 (199)
431 COG1504 Uncharacterized conser 43.9 43 0.00093 25.0 3.9 50 23-80 46-95 (121)
432 PF00701 DHDPS: Dihydrodipicol 43.5 39 0.00085 29.8 4.5 57 23-79 16-75 (289)
433 PF02603 Hpr_kinase_N: HPr Ser 43.3 24 0.00052 27.1 2.7 48 25-80 64-111 (127)
434 PRK10933 trehalose-6-phosphate 42.8 17 0.00038 35.5 2.3 57 25-82 29-102 (551)
435 TIGR02403 trehalose_treC alpha 41.1 19 0.0004 35.2 2.2 59 23-82 21-96 (543)
436 cd00984 DnaB_C DnaB helicase C 40.9 99 0.0021 26.1 6.5 54 25-79 105-168 (242)
437 PLN02361 alpha-amylase 40.9 19 0.00041 33.6 2.1 28 55-82 70-97 (401)
438 PRK09505 malS alpha-amylase; R 40.5 20 0.00042 36.1 2.3 26 57-82 288-313 (683)
439 PRK00945 acetyl-CoA decarbonyl 40.2 83 0.0018 25.6 5.4 51 25-82 21-71 (171)
440 cd00954 NAL N-Acetylneuraminic 39.9 92 0.002 27.5 6.3 58 22-79 14-75 (288)
441 COG1387 HIS2 Histidinol phosph 39.9 52 0.0011 28.2 4.6 53 25-86 146-199 (237)
442 cd04736 MDH_FMN Mandelate dehy 39.6 43 0.00093 30.8 4.1 28 55-82 270-297 (361)
443 PRK03170 dihydrodipicolinate s 39.4 70 0.0015 28.2 5.5 57 15-73 10-66 (292)
444 PLN02447 1,4-alpha-glucan-bran 39.2 22 0.00047 36.1 2.3 28 56-83 295-322 (758)
445 TIGR00674 dapA dihydrodipicoli 38.3 89 0.0019 27.5 5.9 58 14-73 6-63 (285)
446 TIGR02456 treS_nterm trehalose 38.3 21 0.00044 34.8 2.0 27 57-83 72-98 (539)
447 PLN02417 dihydrodipicolinate s 38.3 77 0.0017 27.9 5.5 56 23-78 16-74 (280)
448 TIGR03249 KdgD 5-dehydro-4-deo 36.1 98 0.0021 27.5 5.9 51 23-73 20-70 (296)
449 TIGR01362 KDO8P_synth 3-deoxy- 36.0 2.1E+02 0.0045 25.0 7.4 57 25-84 126-185 (258)
450 PF04309 G3P_antiterm: Glycero 35.9 35 0.00077 27.9 2.7 30 57-86 27-58 (175)
451 PF00036 EF-hand_1: EF hand; 35.9 34 0.00074 18.7 1.8 19 19-37 10-28 (29)
452 TIGR00683 nanA N-acetylneurami 35.7 92 0.002 27.6 5.6 56 23-78 15-74 (290)
453 PLN02905 beta-amylase 35.6 4.6E+02 0.01 26.2 10.5 55 25-79 282-341 (702)
454 PRK00014 ribB 3,4-dihydroxy-2- 34.6 1.2E+02 0.0027 25.9 5.8 51 31-83 159-209 (230)
455 PF02638 DUF187: Glycosyl hydr 34.4 1.4E+02 0.003 26.8 6.6 52 27-78 17-87 (311)
456 PF14871 GHL6: Hypothetical gl 34.1 84 0.0018 24.3 4.5 21 60-80 43-63 (132)
457 PLN00197 beta-amylase; Provisi 34.1 4.6E+02 0.01 25.7 11.8 55 25-79 123-182 (573)
458 PRK00685 metal-dependent hydro 33.9 1.6E+02 0.0036 24.5 6.7 53 13-72 160-212 (228)
459 PF05913 DUF871: Bacterial pro 33.9 48 0.001 30.5 3.5 58 27-84 12-70 (357)
460 PRK01792 ribB 3,4-dihydroxy-2- 33.7 2.1E+02 0.0045 24.3 7.0 66 13-81 137-202 (214)
461 smart00839 ELFV_dehydrog Gluta 33.7 1.2E+02 0.0027 22.1 5.1 53 253-305 40-96 (102)
462 cd00408 DHDPS-like Dihydrodipi 33.5 72 0.0016 27.9 4.5 60 14-78 5-70 (281)
463 COG0648 Nfo Endonuclease IV [D 33.2 1.1E+02 0.0025 27.0 5.6 56 28-84 120-179 (280)
464 PRK00910 ribB 3,4-dihydroxy-2- 33.0 1.4E+02 0.003 25.4 5.8 51 30-82 154-204 (218)
465 PRK14706 glycogen branching en 32.6 31 0.00068 34.4 2.3 27 57-83 213-239 (639)
466 PRK12457 2-dehydro-3-deoxyphos 32.5 2.7E+02 0.0059 24.6 7.7 59 25-84 140-201 (281)
467 TIGR02313 HpaI-NOT-DapA 2,4-di 32.4 1.2E+02 0.0025 27.0 5.7 27 16-44 10-36 (294)
468 PF14488 DUF4434: Domain of un 32.0 2.3E+02 0.005 22.8 6.9 56 25-80 16-84 (166)
469 PRK03353 ribB 3,4-dihydroxy-2- 32.0 1.4E+02 0.0031 25.3 5.8 50 31-82 154-203 (217)
470 PF05378 Hydant_A_N: Hydantoin 32.0 1.2E+02 0.0026 24.7 5.3 45 25-74 130-176 (176)
471 PF05176 ATP-synt_10: ATP10 pr 31.8 81 0.0017 27.4 4.4 47 252-299 205-251 (252)
472 PF07905 PucR: Purine cataboli 30.4 2.4E+02 0.0051 21.2 6.4 47 27-78 57-103 (123)
473 cd00248 Mth938-like Mth938-lik 29.9 2E+02 0.0044 21.2 5.8 50 25-82 38-87 (109)
474 PLN02960 alpha-amylase 29.8 37 0.0008 35.0 2.2 29 55-83 460-488 (897)
475 COG0366 AmyA Glycosidases [Car 29.7 34 0.00074 32.5 2.0 27 56-82 72-98 (505)
476 TIGR03278 methan_mark_10 putat 29.4 1.8E+02 0.0039 27.3 6.6 59 25-84 53-112 (404)
477 TIGR02100 glgX_debranch glycog 29.4 34 0.00073 34.5 1.9 26 58-83 242-267 (688)
478 cd05126 Mth938 Mth938 domain. 29.4 1.3E+02 0.0027 22.8 4.6 50 25-82 45-94 (117)
479 COG2099 CobK Precorrin-6x redu 28.9 57 0.0012 28.3 2.9 24 60-83 52-75 (257)
480 CHL00073 chlN photochlorophyll 28.7 1.3E+02 0.0027 28.8 5.5 54 27-82 81-136 (457)
481 cd00953 KDG_aldolase KDG (2-ke 28.7 1.3E+02 0.0029 26.4 5.4 50 24-73 15-64 (279)
482 PRK13585 1-(5-phosphoribosyl)- 28.4 1.2E+02 0.0026 25.8 5.0 52 27-82 33-84 (241)
483 COG0552 FtsY Signal recognitio 28.4 35 0.00075 30.9 1.6 92 25-126 208-307 (340)
484 PRK12568 glycogen branching en 28.0 41 0.0009 34.0 2.2 27 57-83 315-341 (730)
485 KOG3974 Predicted sugar kinase 27.9 39 0.00085 29.4 1.8 21 62-82 120-140 (306)
486 PRK14705 glycogen branching en 27.8 40 0.00086 36.3 2.1 29 55-83 809-837 (1224)
487 cd07018 S49_SppA_67K_type Sign 27.6 2.5E+02 0.0055 23.6 6.8 79 25-115 28-111 (222)
488 PLN02784 alpha-amylase 27.3 43 0.00094 34.4 2.2 28 55-82 562-589 (894)
489 COG2052 Uncharacterized protei 26.9 1.3E+02 0.0029 20.7 3.8 31 47-84 19-49 (89)
490 COG0352 ThiE Thiamine monophos 26.8 56 0.0012 27.6 2.5 48 28-81 24-72 (211)
491 TIGR03849 arch_ComA phosphosul 26.4 1.5E+02 0.0033 25.5 5.1 51 26-82 9-62 (237)
492 PLN00125 Succinyl-CoA ligase [ 26.0 99 0.0021 27.7 4.1 49 28-84 83-131 (300)
493 TIGR02104 pulA_typeI pullulana 25.9 38 0.00082 33.6 1.5 24 60-83 228-251 (605)
494 PLN02161 beta-amylase 25.9 6.2E+02 0.013 24.6 10.2 55 25-79 113-172 (531)
495 TIGR02717 AcCoA-syn-alpha acet 25.8 3.4E+02 0.0074 25.8 7.9 56 28-84 74-131 (447)
496 TIGR01019 sucCoAalpha succinyl 25.7 91 0.002 27.7 3.8 47 28-83 77-123 (286)
497 PF04577 DUF563: Protein of un 25.6 3.6E+02 0.0078 21.8 8.1 89 30-126 86-180 (206)
498 TIGR00315 cdhB CO dehydrogenas 25.4 96 0.0021 25.0 3.5 48 25-80 14-61 (162)
499 PF05209 MinC_N: Septum format 25.3 1.3E+02 0.0028 21.8 4.0 49 25-77 22-75 (99)
500 PF13405 EF-hand_6: EF-hand do 25.2 55 0.0012 17.8 1.5 19 19-37 10-28 (31)
No 1
>PLN02590 probable tyrosine decarboxylase
Probab=100.00 E-value=7.5e-52 Score=390.47 Aligned_cols=290 Identities=56% Similarity=1.023 Sum_probs=266.5
Q ss_pred CcceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEee
Q 046506 1 KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 1 kaa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD 80 (310)
|||+++|++..+++.||+|..+.+.||+++|+++|.+.++.+.+|++||.+.++|.+|++|||++|+++|++||+|+|||
T Consensus 244 KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVD 323 (539)
T PLN02590 244 KACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVD 323 (539)
T ss_pred HHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEe
Confidence 78999999999999999996445799999999999999888899999999999999999999999999999999999999
Q ss_pred cccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
||+|++++++++++.+..+++.+||+++++|||+++|++||+++++++..+.+.+...++|+..........+++.++++
T Consensus 324 aA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i 403 (539)
T PLN02590 324 AAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQI 403 (539)
T ss_pred cchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCC
Confidence 99999999999998888999999999999999999999999999999977778888889999654333334678999999
Q ss_pred ccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccc
Q 046506 161 TLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLL 240 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
++|||++++++|++++.+|.+|+.++++++.+++++|.+.|++.|+|+++.+|..++|+|++.+..
T Consensus 404 ~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~~~-------------- 469 (539)
T PLN02590 404 SLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVD-------------- 469 (539)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEEecCCC--------------
Confidence 999999999999999999999999999999999999999999999999999999999999998742
Q ss_pred hhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 241 SEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 241 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.+++..++++..+.++|.++|.++++++.+++..+||+++.++.|+++||+.+++.|.+.+.++
T Consensus 470 ~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~ 533 (539)
T PLN02590 470 GDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKF 533 (539)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence 1234457889999999999999999999999999999999999999999999999999988765
No 2
>PLN02880 tyrosine decarboxylase
Probab=100.00 E-value=3e-50 Score=379.33 Aligned_cols=294 Identities=59% Similarity=1.047 Sum_probs=265.8
Q ss_pred CcceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEee
Q 046506 1 KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 1 kaa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD 80 (310)
|||+++|++..+++.||+|+++++.||+++|+++|.+.++.+.+|++||.+.++|.+|.+|||++|+++|++||+|+|||
T Consensus 196 Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVD 275 (490)
T PLN02880 196 KACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVD 275 (490)
T ss_pred HHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEe
Confidence 78999999999999999987556799999999999998888889999999999999999999999999999999999999
Q ss_pred cccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
||||++.+..+.++....+++.+||+++++|||+++|++||+++++++..+.+.+..+++|+........+.+++.++++
T Consensus 276 aA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i 355 (490)
T PLN02880 276 AAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQI 355 (490)
T ss_pred hhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCc
Confidence 99999998888888888888889999999999999999999999998866667777888898764332234568888999
Q ss_pred ccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccc
Q 046506 161 TLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLL 240 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
+.|||++++++|++++.+|.+++.++++++.++++++.+.|++.|+++++.++..++++|++.+..
T Consensus 356 ~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~~-------------- 421 (490)
T PLN02880 356 PLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPPK-------------- 421 (490)
T ss_pred CCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCCC--------------
Confidence 999999999999999999999999999999999999999999999999999999999999998742
Q ss_pred hhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhhcc
Q 046506 241 SEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLSAS 308 (310)
Q Consensus 241 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~~~ 308 (310)
.+.+..++++..+.++|.++|.++++++.+.+..++|+|+++|.|+++||+.+++.|.+++.++..++
T Consensus 422 ~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~~~~ 489 (490)
T PLN02880 422 NNEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLLGKS 489 (490)
T ss_pred CChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 12345578889999999999999999999999999999999999999999999999999998875543
No 3
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=100.00 E-value=7.7e-46 Score=350.13 Aligned_cols=290 Identities=24% Similarity=0.392 Sum_probs=251.4
Q ss_pred CcceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEee
Q 046506 1 KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 1 kaa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD 80 (310)
|+|+++|++..+++.||+|++ +.||+++|+++|.+..+.+..|+.|+.++++|.+|.++||++|+++|+++|+|+|||
T Consensus 224 kaa~~lglg~~~v~~vp~d~~--g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVD 301 (522)
T TIGR03799 224 KAADVLGIGRDNLIAIKTDAN--NRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVD 301 (522)
T ss_pred HHHHHcCCCcccEEEEEeCCC--CcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEE
Confidence 678899998778999999975 599999999999887777777888999999999999999999999999999999999
Q ss_pred cccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
+|++++.++.++++....+++++|++++++|||+++|+|||+++++++..+ +.+...++|+...+ ..++.++++
T Consensus 302 aA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~-~~~~~~~~Yl~~~~-----~~d~~~~~l 375 (522)
T TIGR03799 302 AAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALM-SAIEHHAEYILRKG-----SKDLGSHTL 375 (522)
T ss_pred chhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHH-HHhccCcchhcCCC-----CCcccccee
Confidence 999999888888887788888899999999999999999999999998654 55666678875432 235667899
Q ss_pred ccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccc
Q 046506 161 TLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLL 240 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
++||++.++++|++++.+|.+|++++.+++.++++++.+.|++.|+++++++|..++++|++.|......+..+..++..
T Consensus 376 egsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~ 455 (522)
T TIGR03799 376 EGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQRE 455 (522)
T ss_pred ecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999886654445445544444
Q ss_pred hhHHHHHHHHHHHHHHHHhcCcEEEEEeEEC-------CEeEEEEEccCCCCCHHHHHHHHHHHH
Q 046506 241 SEEERINEFNRELLESINASGKAYMTHAVLG-------GIYAIRFAAGATLTEERHVMVAWTVVQ 298 (310)
Q Consensus 241 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-------~~~~iRis~~~~~~t~edi~~li~~l~ 298 (310)
...+..+.+++.+.+++.+.|..+++.+... +..++|++++||.||++||+.+++.-.
T Consensus 456 ~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~~~ 520 (522)
T TIGR03799 456 KINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDEQR 520 (522)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHHhh
Confidence 4445678899999999999999999987654 347899999999999999999887643
No 4
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-41 Score=296.81 Aligned_cols=295 Identities=23% Similarity=0.372 Sum_probs=260.8
Q ss_pred CcceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEee
Q 046506 1 KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 1 kaa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD 80 (310)
|||.++|+|..+++.|++++.| +|++++||++|.+.++.+..|++|++++++|+.|+.|||..|+++|.+|++|+|||
T Consensus 212 kaAa~lg~gtd~c~~v~t~e~G--km~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvD 289 (510)
T KOG0629|consen 212 KAAAFLGLGTDHCIKVKTDERG--KMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVD 289 (510)
T ss_pred HHHHHhccCCceeEEecccccC--ccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEee
Confidence 6899999999999999999855 99999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
+|+|++.+.+..++.++.+++.+||++.++||++++|..|+.++++....+.++-+.++.|+++.+..++-..|.++..+
T Consensus 290 AAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~i 369 (510)
T KOG0629|consen 290 AAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAI 369 (510)
T ss_pred cccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchh
Confidence 99999999998899899999999999999999999999999999999988888889999999999988888889999999
Q ss_pred ccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC--CCceEEEEEEcCCcchhhhhhhhccc
Q 046506 161 TLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP--RHFAVVCFRVSPSAVMDKLKTKYENS 238 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~ 238 (310)
|+||+.+.+.+|..+++-|..|+++.++++.++|+|+.++|++-+++..+.. |+...++|++.|+.++. . +-
T Consensus 370 QCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~----~--~~ 443 (510)
T KOG0629|consen 370 QCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRG----W--QE 443 (510)
T ss_pred hcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhcc----C--cc
Confidence 9999999999999999999999999999999999999999999888876643 67778899999875422 1 11
Q ss_pred cchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECC-EeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 239 LLSEEERINEFNRELLESINASGKAYMTHAVLGG-IYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
.+.-...+.+.+..+..+|.++|..++..+..+. ...+|+.+.++..+++|+|.+++.|..+.+.
T Consensus 444 ~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlgq~ 509 (510)
T KOG0629|consen 444 NPERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLGQD 509 (510)
T ss_pred cchhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHhccC
Confidence 1233345566667777889999987777654433 4689999898889999999999999987654
No 5
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-39 Score=289.76 Aligned_cols=277 Identities=48% Similarity=0.882 Sum_probs=261.0
Q ss_pred CcceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEee
Q 046506 1 KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 1 kaa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD 80 (310)
|||.+.|+. ++.+++|. ++.|+.+.|+++|.++.+.|.+|+.++++.++|.+-..|+|.+|+.+|+++|+|||||
T Consensus 197 ka~~i~~Vk---lR~l~td~--n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~~~glWLHVD 271 (511)
T KOG0628|consen 197 KACLIAGVK---LRALPTDE--NFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCREEGLWLHVD 271 (511)
T ss_pred HhHhhccee---EEEeeccc--CcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchhhhcCEEEEee
Confidence 678888887 99999997 5799999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
+|+++.++.+++++.+..|++.+|++.+++|||+.+-..|+.+++++...+.+.+..+|-|+...... ..+|++.|.+
T Consensus 272 AAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~--~~~Dyrhwqi 349 (511)
T KOG0628|consen 272 AAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQG--SAPDYRHWQI 349 (511)
T ss_pred hhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhhc--cCCCcccccc
Confidence 99999999999999999999999999999999999999999999999977778888999999877643 3779999999
Q ss_pred ccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccc
Q 046506 161 TLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLL 240 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
+.|||++++.+|..++.+|.+++.+.+++..++++.+.+.+.+.+.|++.+++..+++||+..+.
T Consensus 350 pl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgLvcFRlk~~--------------- 414 (511)
T KOG0628|consen 350 PLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGLVCFRLKGD--------------- 414 (511)
T ss_pred ccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccceeEEeecCC---------------
Confidence 99999999999999999999999999999999999999999999999999999999999999986
Q ss_pred hhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 241 SEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 241 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
++.|+.+.++++..|.+++.+....+.-+||+++.++.|+++||+...+.|.+.+..+.
T Consensus 415 ------N~~ne~Ll~~in~~g~i~l~~~~l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~ 473 (511)
T KOG0628|consen 415 ------NEINEALLNRLNSSGRIHLVPASLHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELF 473 (511)
T ss_pred ------cHHHHHHHHHHHhcCcEEEEEeeecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999887753
No 6
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=100.00 E-value=3.2e-40 Score=301.77 Aligned_cols=218 Identities=39% Similarity=0.708 Sum_probs=193.7
Q ss_pred CcceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEee
Q 046506 1 KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 1 kaa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD 80 (310)
|||+++|++ ++.||++++ +.||+++|+++|.+..+.+..|.+|+.+.++|.+|++|||++|+++|+++|+|+|||
T Consensus 156 Kaa~~lGlg---~~~I~~~~~--~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVD 230 (373)
T PF00282_consen 156 KAARILGLG---VRKIPTDED--GRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVD 230 (373)
T ss_dssp HHHHHTTSE---EEEE-BBTT--SSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEE
T ss_pred HhcceeeeE---EEEecCCcc--hhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeec
Confidence 789999999 999999984 599999999999999888888889999999999999999999999999999999999
Q ss_pred cccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
||+|+..+..+.++.+..+++.+||+++++|||+++|++||+++++++..+...+..+++|+.....+++...++.++++
T Consensus 231 aA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl 310 (373)
T PF00282_consen 231 AAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTL 310 (373)
T ss_dssp ETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSS
T ss_pred ccccccccccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccccccccccccccc
Confidence 99999888788888888899999999999999999999999999999988877787788999866544555667889999
Q ss_pred ccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEc
Q 046506 161 TLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVS 223 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~ 223 (310)
++||++.++++|.+++.+|.+|+.+++++..++++++++.|++.++++++.++..++|||++.
T Consensus 311 ~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~k 373 (373)
T PF00282_consen 311 QGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRYK 373 (373)
T ss_dssp SSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEES
T ss_pred cccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEeC
Confidence 999999999999999999999999999999999999999999999999999999999999974
No 7
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=100.00 E-value=1e-36 Score=290.42 Aligned_cols=287 Identities=17% Similarity=0.275 Sum_probs=232.8
Q ss_pred CcceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHH---HHhCc--
Q 046506 1 KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVA---KQFGI-- 75 (310)
Q Consensus 1 kaa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~---~~~g~-- 75 (310)
|||+++|++..+++.||+|++ ++||+++|++.|.+..+.+..|..||.+.++|.+|++|||++|+++| +++|+
T Consensus 237 KAa~ilGlG~~~vv~VpvD~~--~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~ 314 (608)
T TIGR03811 237 KAADIIGIGLDQVIPVPVDSN--YRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYF 314 (608)
T ss_pred HHHHHcCCCcccEEEeecCCC--CcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCce
Confidence 789999999999999999964 59999999999998877777788899999999999999999999999 67898
Q ss_pred EEEeeccccccc--ccC------------------------------hhhhhhhcCCCCCCeeeeecccccccccceEEE
Q 046506 76 WVHVDAAYAGSA--CIC------------------------------PEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCL 123 (310)
Q Consensus 76 ~l~vD~a~~~~~--~~~------------------------------~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l 123 (310)
|+|||||+|+++ +.. ++++....+++.+||+++++|||++.|++||++
T Consensus 315 ~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~l 394 (608)
T TIGR03811 315 YLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGI 394 (608)
T ss_pred eEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEE
Confidence 699999998864 221 234455678889999999999999999999999
Q ss_pred EEeCchhHHhhhccCCcccccccccccccc-CCCCceeccCCC-cchHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHH
Q 046506 124 WVKDPSDLVNSLSTNPEYLKNKATESKQVV-DYKDWQITLSRR-FRSLKLWFVLRNY--GVANLRHFLRSHVNMAKLFER 199 (310)
Q Consensus 124 ~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~l~~ 199 (310)
++|++. +.+.+...++|++.... ..+ ....++++++|+ +.++++|++++.+ |.+|+.++++++.++++++.+
T Consensus 395 l~Rd~~-~~~~~~~~a~Yl~~~~~---~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~ 470 (608)
T TIGR03811 395 VIQDIR-MRDVISYFATYVFEKGA---DIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYD 470 (608)
T ss_pred EEeCHH-HHHHHhcCcchhccccc---cCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 999996 45777788899976432 222 346678888886 6799999999998 999999999999999999999
Q ss_pred HHcC------CCCeEE--ecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh------cCcEEE
Q 046506 200 LVGS------DKRFEV--VFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA------SGKAYM 265 (310)
Q Consensus 200 ~L~~------~~~~~v--~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------~g~~~~ 265 (310)
.|++ .+.+++ +.+|+.++|+|++.+.+ ..+.+.++.+|+.+.+++.- ..-+.+
T Consensus 471 ~L~~~~~~~~~~~~el~~~~~pdlniV~Fr~~~~g-------------~~~l~~~n~ln~~i~~~~~~~~g~~~~~~~~~ 537 (608)
T TIGR03811 471 FLNNLEFKVGDKEIEVHPLTKPDFNMVDYVFNEKG-------------NDDLVKMNKLNHAFYDYASYVKGSIYNNEFIT 537 (608)
T ss_pred HHHhcccccCCCCeeEEecCCCCcceEEEEEecCC-------------CccHHHHHHHHHHHHHhhccccCCCCCcceEe
Confidence 9987 456776 67899999999998753 12446678999999998862 222444
Q ss_pred EEeEE--------------------------CCEeEEEEEccCCCCCH-HHHHHHHHHHHHHHHHHhh
Q 046506 266 THAVL--------------------------GGIYAIRFAAGATLTEE-RHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 266 ~~~~~--------------------------~~~~~iRis~~~~~~t~-edi~~li~~l~~~~~~~~~ 306 (310)
+.+.. ....++|.++++|+.++ +.++.+++.|++...+..+
T Consensus 538 s~t~~~~~~yg~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~m~p~~~~~~~~~~~~~~~~~~~~~~~~ 605 (608)
T TIGR03811 538 SHTDFAIPDYGDSPFAFVNSLGFSDEEWQRAGKVTILRASVMTPYMNDKENFDEYAPKIKAAMQEKLE 605 (608)
T ss_pred eecccccchhhhhHHHHHHHcCCChhhhccCCceEEEEEEecCcccCChhhHHHHHHHHHHHHHHHHH
Confidence 43322 12469999999888555 7888888888887765544
No 8
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=1.5e-37 Score=288.20 Aligned_cols=265 Identities=16% Similarity=0.259 Sum_probs=217.4
Q ss_pred CcceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh------C
Q 046506 1 KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF------G 74 (310)
Q Consensus 1 kaa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~------g 74 (310)
|+++++|+. ++.||+|++ .+.+|+++|+++|+++ +.+|++++++|++|+++||++|+++|+++ |
T Consensus 153 ka~~~lg~~---v~~i~~d~~-~~~vd~~~L~~~i~~~------t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~ 222 (431)
T TIGR01788 153 KFARYFDVE---LREVPMDPG-RYVIDPEQVVEAVDEN------TIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWD 222 (431)
T ss_pred HHHHHcCce---eEEEecCCC-ceeeCHHHHHHHHhhC------CeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCC
Confidence 567788887 999999973 3589999999999876 46999999999999999999999999999 9
Q ss_pred cEEEeecccccccccCh--hhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccc
Q 046506 75 IWVHVDAAYAGSACICP--EFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQV 152 (310)
Q Consensus 75 ~~l~vD~a~~~~~~~~~--~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~ 152 (310)
+|+|||+||+++++++. ..+. ...+.++|++++|+|||+++|+|+|+++++++..+.+.+...++|+....
T Consensus 223 ~~~HvDaaq~g~~~p~~~~~~~~-~~~~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~------ 295 (431)
T TIGR01788 223 IPIHVDAASGGFIAPFVYPDLEW-DFRLPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDE------ 295 (431)
T ss_pred ceEEEecccHHHHHHHhCCCchh-hcCCCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCCC------
Confidence 99999999998876542 2221 11356799999999999999999999999987555455666677875421
Q ss_pred cCCCCceeccCCCc-chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC-CCceEEEEEEcCCcchhh
Q 046506 153 VDYKDWQITLSRRF-RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP-RHFAVVCFRVSPSAVMDK 230 (310)
Q Consensus 153 ~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~~~~v~~~~~~~~~~~~ 230 (310)
.+.+++++|++ .+++.|+.++.+|..|++++.+++.++++++.++|+++|+++++.+ +..++++|++.+.+
T Consensus 296 ---~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~---- 368 (431)
T TIGR01788 296 ---PTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDA---- 368 (431)
T ss_pred ---CCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCC----
Confidence 23578889986 7789999999999999999999999999999999999999999987 78999999998631
Q ss_pred hhhhhccccchhHHHHHHHHHHHHHHHHhcCcE---EEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 231 LKTKYENSLLSEEERINEFNRELLESINASGKA---YMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
. .+..+.++.++|.++|.. +..|..+++...+|++++ ++++++.++.|++.|+++...+
T Consensus 369 -----------~---~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~-~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 369 -----------D---PGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVR-EGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred -----------C---CCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEec-CCCCHHHHHHHHHHHHHHHHhh
Confidence 0 011135788888888865 344555678889999976 6899999999999999987654
No 9
>PLN02263 serine decarboxylase
Probab=100.00 E-value=3.5e-35 Score=271.07 Aligned_cols=245 Identities=18% Similarity=0.187 Sum_probs=200.5
Q ss_pred CcceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCc-----
Q 046506 1 KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGI----- 75 (310)
Q Consensus 1 kaa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~----- 75 (310)
|||+++|++ ++.||++++ +.||+++|+++|.+++ .+|.+|+++.++|.+|++|||++|+++|+++|+
T Consensus 193 KAa~llgi~---~~~Vp~d~~--g~mD~~aL~~aI~~d~---~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~i 264 (470)
T PLN02263 193 KAARMYRME---CVKVDTLVS--GEIDCADFKAKLLANK---DKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRF 264 (470)
T ss_pred HHHHhcCCc---ceEeccCCC--CcCcHHHHHHHHHhCC---CCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCe
Confidence 799999997 999999874 5999999999998754 258899999999999999999999999999997
Q ss_pred EEEeecccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCC
Q 046506 76 WVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDY 155 (310)
Q Consensus 76 ~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 155 (310)
|+|||||+|++.+++....+..+....+||+++++|||+++|++||+++++++. + +.+...+.|+....
T Consensus 265 wlHVDAA~GG~~lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~-~-~~~~~~~~Yl~~~d--------- 333 (470)
T PLN02263 265 YIHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEH-I-NVLSSNVEYLASRD--------- 333 (470)
T ss_pred eEEEeccchhhHhhhcccccccCCCcCccEEEECCccccCCCcCEEEEEEehhh-H-hhhccChHhhCCCC---------
Confidence 999999999988866433322333445999999999999999999999999753 3 56667788887542
Q ss_pred CCceeccCCCc-chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhh
Q 046506 156 KDWQITLSRRF-RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 156 ~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~ 234 (310)
.+++++|++ .++++|++++.+|.+|+.++++++.++++++.+.|++. ++.++.+|..++|+|..+..
T Consensus 334 --~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V~f~~p~~--------- 401 (470)
T PLN02263 334 --ATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSSTVVFERPKD--------- 401 (470)
T ss_pred --CCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceEEEEecCch---------
Confidence 367899996 57999999999999999999999999999999999987 78777788888998864321
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+. ..+|. .++. ....+|++++ ++.+.+.+|.|++.|++..+.
T Consensus 402 -----------------~~----~~~gW-~L~~----~~~~~Hivvm-phv~~~~id~fi~DL~~~~~~ 443 (470)
T PLN02263 402 -----------------EE----FVRRW-QLAC----QGNIAHVVVM-PSVTIEKLDYFLKELVEKRST 443 (470)
T ss_pred -----------------HH----hhcce-EEcc----CCCcEEEEEc-CCCCHHHHHHHHHHHHHHHhh
Confidence 11 12332 3332 1246899988 788999999999999887753
No 10
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=3.8e-35 Score=272.94 Aligned_cols=274 Identities=25% Similarity=0.405 Sum_probs=213.4
Q ss_pred CcceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEee
Q 046506 1 KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 1 kaa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD 80 (310)
|+|+++|++ ++.+|.+++ .+.||+++|+++|++.+..+ .|+.+.++|.+|.+|||++|+++|+++++|+|||
T Consensus 172 Kaa~~lG~~---~~~v~~~~~-~~~id~~~l~~~i~~~t~~g----~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVD 243 (460)
T COG0076 172 KAARYLGLG---LRRVPTVPT-DYRIDVDALEEAIDENTIGG----VVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVD 243 (460)
T ss_pred HHHHHhCCC---ceeEEeccC-ccccCHHHHHHHHHhhccCc----eEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEE
Confidence 789999999 888888875 57999999999999987633 5999999999999999999999999999999999
Q ss_pred cccccccccChhhhhh-hcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCce
Q 046506 81 AAYAGSACICPEFRHF-IDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~-~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 159 (310)
+|.|++.+++.++... ..+++++||+++++|||+++|.|||++++++++.+.+.+....+|+.... ...++
T Consensus 244 AA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~--------~~~~t 315 (460)
T COG0076 244 AAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGGG--------IPNFT 315 (460)
T ss_pred ccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccCCCCC--------cCcee
Confidence 9999999988777665 67888999999999999999999999999999767677666666766531 23456
Q ss_pred eccCCCc-chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccc
Q 046506 160 ITLSRRF-RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENS 238 (310)
Q Consensus 160 ~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 238 (310)
+.++|.. .++++|+.++.+|.+||.++.+++.++++++++.|++.+.++++++|..++|+|+.++.. + .
T Consensus 316 i~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~~~--------~--~ 385 (460)
T COG0076 316 ILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDDE--------D--T 385 (460)
T ss_pred EeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCCcc--------c--c
Confidence 7777775 789999999999999999999999999999999999998899999999999999995521 0 0
Q ss_pred cchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 239 LLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
.....+..+..+..+......+|...+..+...++...++.+.+..++.++ +.+...+....
T Consensus 386 ~~~~~~~~~~~gw~v~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 447 (460)
T COG0076 386 LADLSERLDRRGWQVPAQLLPKGLAIVFGTHVTGRQGLKFIVANLLITDRE-ESLLALIEEPG 447 (460)
T ss_pred hhchHHHHHhcCceeecccCCccceeeeeeEEeeeeeehhhcchhhhhhhh-HHHHHHhhhhh
Confidence 000111112222223333333444444445556677777776766666666 55555555433
No 11
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=1.1e-34 Score=263.90 Aligned_cols=241 Identities=20% Similarity=0.248 Sum_probs=194.7
Q ss_pred CcceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhC-----c
Q 046506 1 KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFG-----I 75 (310)
Q Consensus 1 kaa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g-----~ 75 (310)
|+++++|++ ++.||+++++ .+|+++|+++|++++. .|.+|++++++|++|+++||++|+++|++|| +
T Consensus 126 kaa~~lg~~---~~~V~~d~~g--~id~~~L~~~i~~~~~---~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~ 197 (374)
T PLN03032 126 KAARMYRME---AVKVPTLPSG--EIDYDDLERALAKNRD---KPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRF 197 (374)
T ss_pred HHHHHcCCC---CeEeeeCCCC--cCcHHHHHHHHHHcCC---CCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCe
Confidence 678899998 8999999754 9999999999987531 4778999999999999999999999999996 5
Q ss_pred EEEeecccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCC
Q 046506 76 WVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDY 155 (310)
Q Consensus 76 ~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 155 (310)
|+|||+|++++.+++....+..+...++|++++|+|||+++|.|||+++++++. + +.+...++|+...
T Consensus 198 ~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~-~-~~~~~~~~Yl~~~---------- 265 (374)
T PLN03032 198 YIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMPCGVALTRKKH-V-KALSQNVEYLNSR---------- 265 (374)
T ss_pred eEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcCeEEEEEEchh-h-HhhccCCcccCCC----------
Confidence 999999999988876332221222246999999999999999999999999763 3 4455667887643
Q ss_pred CCceeccCCC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhh
Q 046506 156 KDWQITLSRR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 156 ~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~ 234 (310)
+.++++||+ +.++++|++++.+|.+|+.++.+++.++++++.+.|++. +++++.+|..++|+|..+..
T Consensus 266 -d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~~V~f~~~~~--------- 334 (374)
T PLN03032 266 -DATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSSTVVFERPMD--------- 334 (374)
T ss_pred -CCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCceEEEEcCCCc---------
Confidence 347899997 678999999999999999999999999999999999986 88887788888888866542
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQE 299 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~ 299 (310)
..+. +| ..++.. ...+|++++ ++++++.+|.|++.|++
T Consensus 335 ----------------~~~~-----~~-w~l~~~----~~~~hi~vm-~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 335 ----------------EAFI-----KK-WQLACE----GDIAHVVVM-PNVTVEKLDEFVEELVE 372 (374)
T ss_pred ----------------HhHh-----he-eeeccc----CCEEEEEEC-CCCCHHHHHHHHHHHhc
Confidence 1121 23 233321 237999988 78999999999998875
No 12
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=4.8e-34 Score=261.51 Aligned_cols=244 Identities=20% Similarity=0.299 Sum_probs=195.8
Q ss_pred CcceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhC---cEE
Q 046506 1 KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFG---IWV 77 (310)
Q Consensus 1 kaa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g---~~l 77 (310)
|+++++|++ ++.||++++ +.+|+++|+++|+++ +.+|.+|++++++|++|.++|+++|+++|++|| +|+
T Consensus 125 ka~~~lg~~---~~~V~~~~~--g~id~~~L~~~i~~~---~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~l 196 (380)
T PRK02769 125 KIARLLRIK---SRVITSLPN--GEIDYDDLISKIKEN---KNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYI 196 (380)
T ss_pred HHHHHcCCC---CceeccCCC--CcCcHHHHHHHHHhC---CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEE
Confidence 578889998 778898864 589999999999876 334779999999999999999999999999998 699
Q ss_pred EeecccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 78 HVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 78 ~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
||||||+++.+++.......+...++|++++|+|||+++|.|||+++++++. +.. +....+|+... +
T Consensus 197 HVDaA~gg~~~p~~~~~~~~d~~~~vDsis~s~HK~~~~P~g~G~l~~r~~~-~~~-~~~~~~yl~~~-----------d 263 (380)
T PRK02769 197 HADAALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKKY-VER-ISVDVDYIGSR-----------D 263 (380)
T ss_pred EEEecccceeecccCccccCCccCCCCEEEECCcccCCCCCCcEEEEEehhh-hhh-cccCccccCCC-----------C
Confidence 9999999998876443222222236999999999999999999999999763 333 33345555432 3
Q ss_pred ceeccCCC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhc
Q 046506 158 WQITLSRR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 158 ~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~ 236 (310)
.+++++|+ +.++++|++++.+|.+|++++.+++.++++++.++|++. +++++.+|..++|+|..+.
T Consensus 264 ~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~~~~v~f~~~~------------ 330 (380)
T PRK02769 264 QTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPNSITVVFPCPS------------ 330 (380)
T ss_pred CCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCceEEEEcCCC------------
Confidence 46788887 578999999999999999999999999999999999885 9999989999999996443
Q ss_pred cccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 237 NSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
.++. ++ ..+++. ...+|++++ +++++|.||.|++.|.+....
T Consensus 331 --------------~~~~-----~~-w~l~~~----~~~~hi~~~-~~~~~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 331 --------------ERIW-----KK-WHLATS----GNQAHIITM-PHHNKQQIDSLIDELIFDLKN 372 (380)
T ss_pred --------------HHHH-----hC-eeEccc----CCEEEEEEC-CCCCHHHHHHHHHHHHHHHhc
Confidence 1222 23 233322 248999988 799999999999999887654
No 13
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-33 Score=259.94 Aligned_cols=252 Identities=17% Similarity=0.165 Sum_probs=198.2
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
..|+. ++++|.+++ +.+++|+++++|++.| ++|++++.+|.+|++.|+++|+++||++|++++||+||+
T Consensus 134 ~~Ga~---v~~i~~~~~--g~~~~~~~~~~i~~~T------klvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~ 202 (405)
T COG0520 134 RTGAK---VRVIPLDDD--GLLDLDALEKLITPKT------KLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQA 202 (405)
T ss_pred hcCcE---EEEEecCCC--CCcCHHHHHHhcCCCc------eEEEEECccccccccchHHHHHHHHHHcCCEEEEECccc
Confidence 34666 999999854 5999999999988875 499999999999999999999999999999999999999
Q ss_pred cccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCcccccccc-c-----cccccCCCCc
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKAT-E-----SKQVVDYKDW 158 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~-~-----~~~~~~~~~~ 158 (310)
+++.+.+... .++|++++|+|||+++|.|+|++|++++. +.+. +++..+... + ....+....+
T Consensus 203 ~~h~~idv~~------l~~Df~afsgHKwl~gP~GiGvLy~r~~~-l~~l----~P~~~gg~~~~~~~~~~~~~~~~~p~ 271 (405)
T COG0520 203 AGHLPIDVQE------LGCDFLAFSGHKWLLGPTGIGVLYVRKEL-LEEL----EPFLGGGGMIEYVSRDEGVTLAELPL 271 (405)
T ss_pred cCccCCCchh------cCCCEEEEcccccccCCCceEEEEEchHH-Hhhc----CCcccCCCceeeecccccccccCcch
Confidence 9999887532 26999999999999999999999999773 3332 222222221 1 1122334556
Q ss_pred eeccCCC--cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC---CceEEEEEEcCCcchhhhhh
Q 046506 159 QITLSRR--FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR---HFAVVCFRVSPSAVMDKLKT 233 (310)
Q Consensus 159 ~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~---~~~~v~~~~~~~~~~~~~~~ 233 (310)
.++.|.+ ...+++.++++.+...+++++.++.+++++++.+.|+++|++++++++ +.++++|.+.+...
T Consensus 272 rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~~------ 345 (405)
T COG0520 272 RFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIHP------ 345 (405)
T ss_pred hhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCCH------
Confidence 6676666 345777888998888899999999999999999999999999999875 68999999998531
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeE--------ECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 234 KYENSLLSEEERINEFNRELLESINASGKAYMTHAV--------LGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
.++...|.++|+....+.. .+-...+|+|+. +|||+||||+|+++|+++..
T Consensus 346 -----------------~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~-~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 346 -----------------HDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLH-LYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred -----------------HHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEe-ecCCHHHHHHHHHHHHHHhh
Confidence 5678888888833222211 111344999966 78999999999999998754
No 14
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=100.00 E-value=2.6e-31 Score=242.08 Aligned_cols=234 Identities=32% Similarity=0.589 Sum_probs=191.0
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeec
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
++..+|.. ++.+|+++++ .+|+++|+++|.+....+..+.++++++++|++|.++|+++|+++|+++|+|+|+|+
T Consensus 111 ~~~~~g~~---~~~v~~~~~~--~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~ 185 (345)
T cd06450 111 AAAYLDVK---VRLVPVDEDG--RMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDA 185 (345)
T ss_pred HHHHHhcC---eEEeeeCCCC--CcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEec
Confidence 34556776 9999998754 899999999998755444456788889999999999999999999999999999999
Q ss_pred ccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceec
Q 046506 82 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
||+.+..+.+........+.++|++++++|||+++|.|+|+++++
T Consensus 186 a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~----------------------------------- 230 (345)
T cd06450 186 AYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR----------------------------------- 230 (345)
T ss_pred hhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH-----------------------------------
Confidence 999888766544433334457999999999999999999987654
Q ss_pred cCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccch
Q 046506 162 LSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLS 241 (310)
Q Consensus 162 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
++++|++++.++.+++++++++..++++++.+.|+++++++++.+++.++++|.+.+..
T Consensus 231 ------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~--------------- 289 (345)
T cd06450 231 ------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSV--------------- 289 (345)
T ss_pred ------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcc---------------
Confidence 34567888888899999999999999999999999999999887788899999987620
Q ss_pred hHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHH
Q 046506 242 EEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQE 299 (310)
Q Consensus 242 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~ 299 (310)
..+..+.++.++|.++|.+++.+.......++|+|+++++||++||++++++|++
T Consensus 290 ---~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 290 ---KLDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred ---hhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 0012235788888888777777665556789999988766899999999999975
No 15
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.97 E-value=5.4e-29 Score=222.12 Aligned_cols=237 Identities=16% Similarity=0.152 Sum_probs=180.8
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccccc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAG 85 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~ 85 (310)
.|++ |.++|++.+| .+|+++|+++|+++| .+|++.+.+|++|+++||++|+++|+++|+++|||++|+.
T Consensus 114 ~g~~---Vtyl~V~~~G--~v~~e~L~~al~~~T------~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~ 182 (386)
T COG1104 114 QGFE---VTYLPVDSNG--LVDLEQLEEALRPDT------ILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAV 182 (386)
T ss_pred cCCe---EEEeCCCCCC--eEcHHHHHHhcCCCc------eEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhc
Confidence 4887 9999999855 999999999999874 4999999999999999999999999999999999999999
Q ss_pred ccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC
Q 046506 86 SACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR 165 (310)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 165 (310)
|-++.+... .++|++++|+||+ ++|.|+|++|+++.-.+ .+.+.+++ .+.++|
T Consensus 183 Gkipi~~~~------~~vD~ls~SaHK~-~GpkGiGaLyv~~~~~~-------~p~i~GGg-------------QE~g~R 235 (386)
T COG1104 183 GKIPIDLEE------LGVDLLSFSAHKF-GGPKGIGALYVRPGVRL-------EPLIHGGG-------------QERGLR 235 (386)
T ss_pred Cceeccccc------cCcceEEeehhhc-cCCCceEEEEECCCCcc-------CceeccCc-------------CCCCCC
Confidence 999887432 1499999999995 78999999999665332 13333332 355555
Q ss_pred cch------HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCC-CCeEEecCC---CceEEEEEEcCCcchhhhhhhh
Q 046506 166 FRS------LKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSD-KRFEVVFPR---HFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 166 ~~~------~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~~---~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
... .++..+++ +..+.++....+...+.++|.+.|.+. |.+.+.+.+ -.++++|.+++..
T Consensus 236 sGTenv~~Ivg~~~A~~-~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~--------- 305 (386)
T COG1104 236 SGTENVPGIVGFGKAAE-IAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVE--------- 305 (386)
T ss_pred CCCccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCc---------
Confidence 432 33344444 346778888899999999999999975 888887653 3567888888742
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE--------------------CCEeEEEEEccCCCCCHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKAYMTHAVL--------------------GGIYAIRFAAGATLTEERHVMVAWT 295 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--------------------~~~~~iRis~~~~~~t~edi~~li~ 295 (310)
.+.+.-.|...|+ +++.+.. ...+.||||+. .+||+||||++++
T Consensus 306 --------------gE~ll~~L~~~gI-~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g-~~tt~eei~~~~~ 369 (386)
T COG1104 306 --------------GESLLLALDLAGI-AVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLG-RFTTEEEIDAAAE 369 (386)
T ss_pred --------------HHHHHHhccccCe-EEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcC-CCCCHHHHHHHHH
Confidence 1233344444443 3332211 12589999977 6899999999999
Q ss_pred HHHHHHHHHhh
Q 046506 296 VVQEHLEALLS 306 (310)
Q Consensus 296 ~l~~~~~~~~~ 306 (310)
+++++.+++++
T Consensus 370 ~l~~~i~~lr~ 380 (386)
T COG1104 370 ALKEIIKRLRE 380 (386)
T ss_pred HHHHHHHHHhh
Confidence 99999999865
No 16
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.96 E-value=1.5e-27 Score=219.55 Aligned_cols=249 Identities=20% Similarity=0.306 Sum_probs=184.4
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeec
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
+++.+|++ ++.||.+++ +.+|+++|+++|++. +..|++++++|.+|.+.|+++|+++|+++|+++|||+
T Consensus 120 ~~~~~g~~---~~~v~~~~~--~~~d~~~l~~~i~~~------~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~ 188 (371)
T PRK13520 120 AADMLGVE---LRRAPLDDD--YRVDVKAVEDLIDDN------TIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDA 188 (371)
T ss_pred HHHHcCce---EEEecCCCC--CcCCHHHHHHHHhhC------CEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEe
Confidence 45667887 999998864 489999999999765 3367777888999999999999999999999999999
Q ss_pred ccccccccChhhh-hhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 82 AYAGSACICPEFR-HFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 82 a~~~~~~~~~~~~-~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
||+++.++..... .......++|++++++|||+++|.++|+++++++..+ +.+....+|+.... .+..
T Consensus 189 a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~-~~l~~~~~~~~~~~----------~~~~ 257 (371)
T PRK13520 189 AFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPIPAGGILFRDESYL-DALAVDTPYLTSKK----------QATL 257 (371)
T ss_pred cchhHHHHhhcCCCCccccCCCCceEEECCccccCccCCceEEEEcCHHHH-HhhcccCccccCCC----------Ccce
Confidence 9987765432111 0111234699999999999998999999998877544 33332334433221 1122
Q ss_pred ccCCC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhcccc
Q 046506 161 TLSRR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSL 239 (310)
Q Consensus 161 ~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 239 (310)
.++++ ...++++++++.++.++++++.++..++++++.+.|+++ +++++.++..+++++.+.+.
T Consensus 258 ~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~~~~-------------- 322 (371)
T PRK13520 258 TGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER-GFEPVIEPVLNIVAFDDPNP-------------- 322 (371)
T ss_pred EeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCceEEEEecCCH--------------
Confidence 33443 345778889988888999999999999999999999987 88855466777888776532
Q ss_pred chhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 240 LSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 240 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
+++.+.|.++|. .+... ....++|+|++ +++|++||++++++|++++.
T Consensus 323 -----------~~v~~~L~~~gi-~v~~~--~~~~~iRis~~-~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 323 -----------DEVREKLRERGW-RVSVT--RCPEALRIVCM-PHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred -----------HHHHHHHHHCCc-eeccC--CCCCEEEEEEE-CCCCHHHHHHHHHHHHHHhh
Confidence 467777777764 33322 23467999966 68999999999999988653
No 17
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.95 E-value=1.2e-26 Score=216.17 Aligned_cols=252 Identities=15% Similarity=0.138 Sum_probs=181.5
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|+. ++.+|.+++ +.+|+++|+++|+++ +.+|++++.+|.+|.+.|+++|+++|+++|++++||++
T Consensus 134 ~~~~g~~---v~~v~~~~~--~~~d~~~l~~~i~~~------t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a 202 (406)
T PRK09295 134 CARVGAE---LRVIPLNPD--GTLQLETLPALFDER------TRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGA 202 (406)
T ss_pred HHHcCcE---EEEEecCCC--CCCCHHHHHHhcCCC------cEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcc
Confidence 3456776 999998864 479999999999764 45899999999999999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCcccccccc-cc-----ccccCCC
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKAT-ES-----KQVVDYK 156 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~-~~-----~~~~~~~ 156 (310)
|+.+..+.+.. . .++|++++|+|| +++|.|+|+++++++ .++. + +++..+... .. ...+...
T Consensus 203 ~~~g~~~~~~~-----~-~~~D~~~~s~~K-~~gp~G~G~l~~~~~-~~~~-~---~~~~~g~~~~~~~~~~~~~~~~~~ 270 (406)
T PRK09295 203 QAVMHHPVDVQ-----A-LDCDFYVFSGHK-LYGPTGIGILYVKEA-LLQE-M---PPWEGGGSMIATVSLTEGTTWAKA 270 (406)
T ss_pred cccCccccCch-----h-cCCCEEEeehhh-ccCCCCcEEEEEchH-hHhh-C---CCcccCCceeeeeecCCccccCCc
Confidence 98887665421 1 258999999999 556889999999765 3322 1 223222211 00 0000111
Q ss_pred CceeccCCC--cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC-CceEEEEEEcCCcchhhhhh
Q 046506 157 DWQITLSRR--FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR-HFAVVCFRVSPSAVMDKLKT 233 (310)
Q Consensus 157 ~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-~~~~v~~~~~~~~~~~~~~~ 233 (310)
...++.|++ ...+++.++++.+...+++++.++..++++++++.|.++++++++++. ..++++|.+....
T Consensus 271 ~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~~~------- 343 (406)
T PRK09295 271 PWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHH------- 343 (406)
T ss_pred hhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCceEEEEEECCcC-------
Confidence 223444444 234677888888766788999999999999999999999999998753 4678899876531
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeE---------ECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 234 KYENSLLSEEERINEFNRELLESINASGKAYMTHAV---------LGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---------~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
..++...|.+.|+ .+.... .+..+.+|+|++ ++||++|||+++++|+++..
T Consensus 344 ----------------~~~~~~~L~~~gI-~v~~g~~c~~~~~~~~~~~~~iRiS~~-~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 344 ----------------AYDVGSFLDNYGI-AVRTGHHCAMPLMAYYNVPAMCRASLA-MYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred ----------------HHHHHHHHHhCCe-EEeccccchHHHHHHHCCCCEEEEEcc-CCCCHHHHHHHHHHHHHHHH
Confidence 1345566666654 333211 112357999955 78999999999999998754
No 18
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.95 E-value=1.3e-26 Score=213.74 Aligned_cols=251 Identities=12% Similarity=0.122 Sum_probs=179.7
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+..|+. ++.++.+++ +.+|+++|++++++. +.++++++++|++|.+.|+++|+++|+++|++++||+||
T Consensus 108 ~~~g~~---~~~v~~~~~--~~~d~~~l~~~~~~~------~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~ 176 (376)
T TIGR01977 108 EQIGVE---ITIVKCDNE--GLISPERIKRAIKTN------TKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQ 176 (376)
T ss_pred HHcCcE---EEEEecCCC--CCcCHHHHHHhcCCC------CeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhh
Confidence 344776 889998864 489999999999653 458889999999999999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccC
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLS 163 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 163 (310)
+.+..+.+... .++|++++++|||+++|.|+|+++++++..+.........+.... ..........++.+
T Consensus 177 ~~g~~~~~~~~------~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~r~~~~ 246 (376)
T TIGR01977 177 TAGVIPIDMTE------LAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGSHSAL----IDQPSELPDRFESG 246 (376)
T ss_pred ccCccCCCchh------cCCCEEEecccccccCCCCceEEEEcCCcCcCceecCCCcccccc----ccccccchhhccCC
Confidence 98887665321 269999999999999999999999988753222111100000000 00000001112223
Q ss_pred CC--cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC----CceEEEEEEcCCcchhhhhhhhcc
Q 046506 164 RR--FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR----HFAVVCFRVSPSAVMDKLKTKYEN 237 (310)
Q Consensus 164 ~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~----~~~~v~~~~~~~~~~~~~~~~~~~ 237 (310)
.+ ...+++.++++.+...|.+.+.+++.++++++++.|.++++++++.+. ..++++|.+.+.+
T Consensus 247 t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----------- 315 (376)
T TIGR01977 247 TLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGID----------- 315 (376)
T ss_pred CCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCCC-----------
Confidence 22 234666778888877889999999999999999999988999988642 3578888875432
Q ss_pred ccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE-----------CCEeEEEEEccCCCCCHHHHHHHHHHHHH
Q 046506 238 SLLSEEERINEFNRELLESINASGKAYMTHAVL-----------GGIYAIRFAAGATLTEERHVMVAWTVVQE 299 (310)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-----------~~~~~iRis~~~~~~t~edi~~li~~l~~ 299 (310)
..++.+.|.+..++++..... ...+.+|+|++ +++|++||++++++|++
T Consensus 316 ------------~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~-~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 316 ------------SEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLG-YFNTEEEIEKLLEALSE 375 (376)
T ss_pred ------------HHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecC-CCCCHHHHHHHHHHHhh
Confidence 135777777662344433211 12468999955 78999999999999976
No 19
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.95 E-value=1.9e-26 Score=212.37 Aligned_cols=246 Identities=21% Similarity=0.310 Sum_probs=179.6
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeec
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
+++..|+. ++.+|.+++ +.+|+++|++++.+.+ ..+++.+++|++|.++|+++|+++|+++|+++|||+
T Consensus 122 ~~~~~G~~---~~~v~~~~~--~~~d~~~l~~~l~~~~------~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~ 190 (373)
T TIGR03812 122 AAEMLGLE---LRYAPLDED--YTVDVKDVEDLIDDNT------IGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDA 190 (373)
T ss_pred HHHHcCCe---EEEEeeCCC--CCcCHHHHHHHHhhCc------EEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEc
Confidence 45667887 999999864 5899999999997653 245555678899999999999999999999999999
Q ss_pred ccccccccChhh----hhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 82 AYAGSACICPEF----RHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 82 a~~~~~~~~~~~----~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
||+++..+.... ........++|++++++|||+.+|.++|++++++++.+. .+....+|+.... .
T Consensus 191 a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~-~l~~~~~~~~~~~----------~ 259 (373)
T TIGR03812 191 AFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYLK-YLSVDAPYLTVKK----------Q 259 (373)
T ss_pred CchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHHHh-hhcccCcccCCCC----------C
Confidence 998765432210 011111236899999999998889889988877776543 3322233433221 1
Q ss_pred ceeccCCC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhc
Q 046506 158 WQITLSRR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 158 ~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~ 236 (310)
...+++++ ...++++++++.++.++++++.+++.++++++++.|+++ +++.+.++..++++|.+.+.
T Consensus 260 ~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~~~~----------- 327 (373)
T TIGR03812 260 ATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI-GFEPVIEPVLNIVAFEVDDP----------- 327 (373)
T ss_pred cceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEcCCCceEEEEEeCCH-----------
Confidence 22334554 346778888988889999999999999999999999988 55544456778888876542
Q ss_pred cccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHH
Q 046506 237 NSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQE 299 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~ 299 (310)
.++.+.|.++|. ++... ....++|+|++ +++|++|+++++++|++
T Consensus 328 --------------~~v~~~L~~~gi-~v~~~--~~~~~iRis~~-~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 328 --------------EEVRKKLRDRGW-YVSVT--RCPKALRIVVM-PHVTREHIEEFLEDLKE 372 (373)
T ss_pred --------------HHHHHHHHHCCc-eeccC--CCCCEEEEEEE-CCCCHHHHHHHHHHHhh
Confidence 357777877764 44332 23568999976 57999999999999976
No 20
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.95 E-value=3.5e-26 Score=214.13 Aligned_cols=256 Identities=14% Similarity=0.122 Sum_probs=182.5
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|+. ++.+|+++++ .+|++++++.|++. +.+|++++.+|.+|.+.|+++|+++|+++|++++||++
T Consensus 143 a~~~g~~---v~~v~~~~~~--~~~~~~l~~~i~~~------t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a 211 (424)
T PLN02855 143 AQKTGAV---LKFVGLTPDE--VLDVEQLKELLSEK------TKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDAC 211 (424)
T ss_pred HHHcCCE---EEEEecCCCC--CcCHHHHHHHhccC------ceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhh
Confidence 3456776 9999998654 69999999999764 45899999999999999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccc---cccCCC--C
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESK---QVVDYK--D 157 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~---~~~~~~--~ 157 (310)
|+.+..+.+.. . .++|++++++||+ ++|.|+|++++++. .+.+. +++..+...... ....+. .
T Consensus 212 ~~~g~~~~~~~-----~-~~~d~~~~s~~K~-~gp~G~G~l~~~~~-~~~~~----~p~~~g~~~~~~~~~~~~~~~~~~ 279 (424)
T PLN02855 212 QSVPHMPVDVQ-----T-LGADFLVASSHKM-CGPTGIGFLWGKSD-LLESM----PPFLGGGEMISDVFLDHSTYAPPP 279 (424)
T ss_pred hhcCCcCCCch-----h-cCCCEEEeecccc-cCCCccEEEEEchh-hhhcC----CCEecCCCceeeeecCccccCCCh
Confidence 98777655421 1 2489999999994 67989999999865 33221 222222111000 000111 1
Q ss_pred ceeccCCC--cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC------CceEEEEEEcCCcchh
Q 046506 158 WQITLSRR--FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR------HFAVVCFRVSPSAVMD 229 (310)
Q Consensus 158 ~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~------~~~~v~~~~~~~~~~~ 229 (310)
..++.|.+ ...+++.++++.+...|++++.+++.++++++++.|+++++++++++. +.++++|.+.+..
T Consensus 280 ~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~--- 356 (424)
T PLN02855 280 SRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIH--- 356 (424)
T ss_pred hhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCcC---
Confidence 12333333 234667777877766799999999999999999999999999998642 3578888876421
Q ss_pred hhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeE---------ECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 230 KLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAV---------LGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---------~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
..++.+.|.++.++.+.... .+-.+.+|+|++ ++||++||++++++|+++
T Consensus 357 --------------------~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~-~ynt~~di~~l~~~l~~~ 415 (424)
T PLN02855 357 --------------------PTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNASARASLY-FYNTKEEVDAFIHALKDT 415 (424)
T ss_pred --------------------HHHHHHHhcccCCEEEechhhhhHHHHHHhCCCCeEEEEec-cCCCHHHHHHHHHHHHHH
Confidence 13566777666234433211 111357999955 789999999999999999
Q ss_pred HHHHh
Q 046506 301 LEALL 305 (310)
Q Consensus 301 ~~~~~ 305 (310)
++.++
T Consensus 416 ~~~~~ 420 (424)
T PLN02855 416 IAFFS 420 (424)
T ss_pred HHHHH
Confidence 88764
No 21
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.95 E-value=4.1e-26 Score=212.22 Aligned_cols=255 Identities=15% Similarity=0.108 Sum_probs=183.0
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|+. ++++|.+++ +.+|+++++++|+++ +.+|++++++|.+|.+.|+++|+++|+++|++++||++
T Consensus 130 ~~~~g~~---v~~v~~~~~--~~~d~~~l~~~i~~~------t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a 198 (401)
T PRK10874 130 AQQTGAK---VVKLPLGAD--RLPDVDLLPELITPR------TRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGA 198 (401)
T ss_pred HHHhCCE---EEEEecCCC--CcCCHHHHHHhcCcC------cEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECC
Confidence 3456776 999999763 589999999999765 45899999999999999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCcccccccc-cccc--c--cCCCC
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKAT-ESKQ--V--VDYKD 157 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~-~~~~--~--~~~~~ 157 (310)
|+.+..+.+. ... ++|++++|+||+ ++|.|+|+++++++ .++.. +++...... .... . .....
T Consensus 199 ~~~g~~~~~~-----~~~-~~d~~~~s~~K~-~gp~G~G~l~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 266 (401)
T PRK10874 199 QGAVHFPADV-----QAL-DIDFYAFSGHKL-YGPTGIGVLYGKSE-LLEAM----SPWQGGGKMLTEVSFDGFTPQSAP 266 (401)
T ss_pred cccccccCCc-----hhc-CCCEEEEecccc-cCCCccEEEEEchH-HHhcC----CCeecCCcceEeeccCccCCCCCh
Confidence 9877765432 122 499999999995 56889999998755 33322 112211110 0000 0 00012
Q ss_pred ceeccCCC--cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhh
Q 046506 158 WQITLSRR--FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 158 ~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
+.++.|.+ ...+++.++++.+...+++++.+++.++++++.+.|+++|+++++.++..++++|.+.+..
T Consensus 267 ~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~~--------- 337 (401)
T PRK10874 267 WRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFRCQDSSLLAFDFAGVH--------- 337 (401)
T ss_pred hhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCcEEEEEECCcC---------
Confidence 23333433 2456777788777667788889999999999999999999999887777788888875421
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE--------CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKAYMTHAVL--------GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--------~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
..++.+.|.++|.....+... +..+.+|+|++ ++||++||++++++|+++++.+
T Consensus 338 --------------~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~-~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 338 --------------HSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFA-PYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred --------------HHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEec-ccCCHHHHHHHHHHHHHHHHHh
Confidence 135666777776543332211 22468999966 5799999999999999987654
No 22
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.95 E-value=5e-26 Score=211.45 Aligned_cols=254 Identities=15% Similarity=0.078 Sum_probs=181.9
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|+. ++++|++++ +.+|+++|+++|+++ +.+|++++.+|.+|.+.|+++|+++|+++|++++||++
T Consensus 127 ~~~~g~~---v~~v~~~~~--~~~~~~~l~~~i~~~------t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a 195 (398)
T TIGR03392 127 AQQTGAK---VVKLPIGAD--LLPDIRQLPELLTPR------TRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGA 195 (398)
T ss_pred HHHcCcE---EEEEecCCC--CCcCHHHHHHHhccC------ceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhh
Confidence 3456776 999999864 479999999999765 34888999999999999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCcccccccc-cccc----ccCCCC
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKAT-ESKQ----VVDYKD 157 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~-~~~~----~~~~~~ 157 (310)
|+.+..+.+.. . .++|++++|+||+ ++|.|+|+++++++ .++.. +++..+... .... .+....
T Consensus 196 ~~~~~~~~~~~-----~-~~~d~~~~s~~K~-~gp~G~G~l~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 263 (398)
T TIGR03392 196 QGVVHGPPDVQ-----A-LDIDFYAFSGHKL-YGPTGIGVLYGKTE-LLEAM----PPWQGGGKMLSHVSFDGFIPQAVP 263 (398)
T ss_pred hhcCCCCCChh-----h-cCCCEEEEecccc-cCCCceEEEEEcHH-HHhhC----CCeecCCceEeeccccccccCCCh
Confidence 98776654321 1 1489999999995 56889999987654 33222 122211110 0000 000112
Q ss_pred ceeccCCC--cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhh
Q 046506 158 WQITLSRR--FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 158 ~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
..++.|++ ...+++.++++.+...+++++.++..++++++++.|.++|++++..++..++++|.+.+..
T Consensus 264 ~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~~--------- 334 (398)
T TIGR03392 264 HRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCPGSSLLAFDFAGVH--------- 334 (398)
T ss_pred hhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCcEEEEEeCCcC---------
Confidence 23444443 2446777888877666888899999999999999999999999886667778888876421
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE---------CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKAYMTHAVL---------GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---------~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.+++.+.|.++|. .+..... +..+.+|+|++ ++||++||++++++|+++++.+
T Consensus 335 --------------~~~l~~~L~~~gI-~v~~g~~~~~~~~~~~g~~~~iRvS~~-~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 335 --------------HSDLAALLAESGI-ALRAGQHCAQPLMAALGVSGTLRASFA-PYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred --------------HHHHHHHHHhCCE-EEecCccchHHHHHHhCCCCEEEEEee-ccCCHHHHHHHHHHHHHHHHHh
Confidence 1356667766664 4432211 12468999966 6899999999999999987654
No 23
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.95 E-value=8.1e-26 Score=210.52 Aligned_cols=247 Identities=12% Similarity=0.073 Sum_probs=171.3
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhh
Q 046506 14 RAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEF 93 (310)
Q Consensus 14 ~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~ 93 (310)
+.++.++ .+.+|++++++.+...+ ..+.+|++++.++.+|.+.|+++|+++||++|++++||++|+++..+.+..
T Consensus 146 ~~~~~~~--~g~~~~~~l~~~~~~~~---~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~ 220 (406)
T TIGR01814 146 VQIEPRE--EETLRLEDILDTIEKNG---DDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLH 220 (406)
T ss_pred EEeccCC--CCccCHHHHHHHHHhcC---CCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccc
Confidence 4666654 34789999999986431 125689999999999999999999999999999999999999998877532
Q ss_pred hhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccc-c--ccccCCCCceeccCCC--cch
Q 046506 94 RHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATE-S--KQVVDYKDWQITLSRR--FRS 168 (310)
Q Consensus 94 ~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~-~--~~~~~~~~~~~~~~~~--~~~ 168 (310)
. .++|++++++|||+++|.| |++++..+.. .+..+..+.+....... . .......+..++.|.+ ...
T Consensus 221 ~------~gvD~~~~s~hK~l~g~pG-~~l~v~~~~~-~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~ 292 (406)
T TIGR01814 221 D------WGVDFACWCTYKYLNAGPG-AGAFVHEKHA-HTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSV 292 (406)
T ss_pred c------CCCCEEEEcCccccCCCCC-eEEEEehhhh-hhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHH
Confidence 1 2699999999999987778 7777766532 22211111111110000 0 0001111223333433 234
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCC----CCeEEecCC----CceEEEEEEcCCcchhhhhhhhccccc
Q 046506 169 LKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSD----KRFEVVFPR----HFAVVCFRVSPSAVMDKLKTKYENSLL 240 (310)
Q Consensus 169 ~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~----~~~~v~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
+++.++++.+...+.+++.++..++++++++.|.++ ++++++++. +.++++|.++ .+
T Consensus 293 ~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~~-------------- 357 (406)
T TIGR01814 293 AALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-VP-------------- 357 (406)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-CC--------------
Confidence 566678887767789999999999999999999875 468888652 2467888776 21
Q ss_pred hhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 241 SEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 241 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
.+++.+.|.++|. ++.. ...+.||+|+++++||++||++++++|++++
T Consensus 358 ---------~~~~~~~L~~~gi-~v~~---~~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 358 ---------GKAVFQALIKRGV-IGDK---REPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred ---------HHHHHHHHHHCCE-EEec---cCCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 1356777777764 4432 2346899997567899999999999998754
No 24
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.94 E-value=5e-26 Score=209.54 Aligned_cols=245 Identities=15% Similarity=0.132 Sum_probs=175.5
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
..|+. ++.+|.++++ .+|+++++++|+++ +.+|++++.+|.+|.+.|+++|+++||++|++++||++|+
T Consensus 111 ~~g~~---v~~i~~~~~~--~~~~~~~~~~l~~~------~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~ 179 (371)
T PF00266_consen 111 RKGAE---VRVIPADPGG--SLDLEDLEEALNPD------TRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQS 179 (371)
T ss_dssp HTTEE---EEEEEEGTTS--SCSHHHHHHHHHTT------ESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTT
T ss_pred cchhh---hccccccccc--hhhhhhhhhhhccc------cceEEeecccccccEEeeeceehhhhhccCCceeEechhc
Confidence 45666 9999998754 89999999999755 4599999999999999999999999999999999999999
Q ss_pred cccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccc-cccccCCCCceeccC
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATE-SKQVVDYKDWQITLS 163 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~~~ 163 (310)
++..+.+... .++|++++++|| |++|.|+|+++++++. +.+..+..+......... ....+....+.++.|
T Consensus 180 ~g~~~id~~~------~~~D~~~~s~~K-l~gp~G~g~l~v~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~G 251 (371)
T PF00266_consen 180 AGCVPIDLDE------LGADFLVFSSHK-LGGPPGLGFLYVRPEA-IERLRPAKPGGGYLDFPSLQEYGLADDARRFEGG 251 (371)
T ss_dssp TTTSS--TTT------TTESEEEEESTS-TTSSSTEEEEEEEHHH-HHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSS
T ss_pred cccccccccc------cccceeeecccc-cCCCCchhhheehhhh-hhccccccccccccccccchhccccccccccccc
Confidence 9998876421 269999999999 8999999999999863 333322221111000000 000011122233444
Q ss_pred CC--cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC----CCceEEEEEEcCCcchhhhhhhhcc
Q 046506 164 RR--FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP----RHFAVVCFRVSPSAVMDKLKTKYEN 237 (310)
Q Consensus 164 ~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~----~~~~~v~~~~~~~~~~~~~~~~~~~ 237 (310)
.+ ...+++..+++.+...|.+++.++..++++++++.|.+++++.++++ ...++++|.+.+.+.
T Consensus 252 T~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------- 321 (371)
T PF00266_consen 252 TPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPGSDA---------- 321 (371)
T ss_dssp S--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTSSH----------
T ss_pred ceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecCCCH----------
Confidence 33 23456677888887779999999999999999999999999999763 246789999966431
Q ss_pred ccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEEC---------CEeEEEEEccCCCCCHHHHHHH
Q 046506 238 SLLSEEERINEFNRELLESINASGKAYMTHAVLG---------GIYAIRFAAGATLTEERHVMVA 293 (310)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---------~~~~iRis~~~~~~t~edi~~l 293 (310)
.++.+.|.++| +.+...... -.+.+|+|++ ++||+||||+|
T Consensus 322 -------------~~~~~~L~~~~-I~~~~G~~~~~~~~~~~~~~~~iRvS~~-~~nt~~dv~~l 371 (371)
T PF00266_consen 322 -------------DDVVKYLEERG-IAVSTGSACAGPSLDILGMGGVIRVSLH-YYNTEEDVDRL 371 (371)
T ss_dssp -------------HHHHHHHHHHT-EEEEESTTTCHHHHHHHHTTTEEEEE-G-TTSSHHHHHHH
T ss_pred -------------HHHHHHHhhcC-EEEeccCcccHHHHHHhCCCCEEEEecc-CCCCHHHHhhC
Confidence 46777787775 444431110 1279999955 78999999986
No 25
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.94 E-value=1.8e-25 Score=207.95 Aligned_cols=254 Identities=14% Similarity=0.138 Sum_probs=179.4
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|+. ++.+|++++ +.+|+++|++++++. +.++++++++|.+|.+.|+++|+++|++||++++||++
T Consensus 129 ~~~~g~~---~~~v~~~~~--~~~~~~~l~~~i~~~------~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a 197 (403)
T TIGR01979 129 AERTGAT---LKFIPLDDD--GTLDLDDLEKLLTEK------TKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGA 197 (403)
T ss_pred HHhcCcE---EEEEecCCC--CCCCHHHHHHHhccC------CeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEch
Confidence 3456776 999999864 489999999999764 45899999999999999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCcccccccccccc-----ccCCCC
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQ-----VVDYKD 157 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~-----~~~~~~ 157 (310)
|+.+..+.+.. .. ++|++++++||++ +|.|+|+++++++ .++.. +++..+....... ......
T Consensus 198 ~~~g~~~~~~~-----~~-~~d~~~~s~~K~~-gp~G~g~l~~~~~-~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~ 265 (403)
T TIGR01979 198 QAVPHMPVDVQ-----AL-DCDFYVFSGHKMY-GPTGIGVLYGKEE-LLEQM----PPFLGGGEMIAEVSFEETTYNEAP 265 (403)
T ss_pred hhcCccccCcc-----cc-CCCEEEEeccccc-CCCCceEEEEchH-HHhcC----CCeecCCCceeecccCccccCCCh
Confidence 98877654321 12 5899999999976 5889999998755 33221 1222111100000 000011
Q ss_pred ceeccCCC--cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC----CceEEEEEEcCCcchhhh
Q 046506 158 WQITLSRR--FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR----HFAVVCFRVSPSAVMDKL 231 (310)
Q Consensus 158 ~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~----~~~~v~~~~~~~~~~~~~ 231 (310)
..++.|++ ...++++++++.+...+.+++.+++.++++++++.|.++++++++.++ +.++++|.+.+..
T Consensus 266 ~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~~----- 340 (403)
T TIGR01979 266 HKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEGVH----- 340 (403)
T ss_pred hhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCCcC-----
Confidence 22333333 134666777777766678899999999999999999999999998653 3678888875421
Q ss_pred hhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeE---------ECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 232 KTKYENSLLSEEERINEFNRELLESINASGKAYMTHAV---------LGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---------~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
..++.+.|.+.|. .+.... +...+.+|+|++ ++||++||++++++|+++.+
T Consensus 341 ------------------~~~~~~~L~~~gI-~v~~g~~~~~~~~~~~~~~~~iRiS~~-~~~t~~di~~l~~~l~~~~~ 400 (403)
T TIGR01979 341 ------------------PHDVGTILDEEGI-AVRSGHHCAQPLMRRFGVPATCRASFY-IYNTEEDIDALVEALKKVRK 400 (403)
T ss_pred ------------------HHHHHHHHhhCCE-EEcchhhhhHHHHHHhCCCCEEEEEec-cCCCHHHHHHHHHHHHHHHH
Confidence 1346666766664 333211 122468999966 78999999999999998776
Q ss_pred HH
Q 046506 303 AL 304 (310)
Q Consensus 303 ~~ 304 (310)
.+
T Consensus 401 ~~ 402 (403)
T TIGR01979 401 FF 402 (403)
T ss_pred Hh
Confidence 54
No 26
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.94 E-value=4.9e-25 Score=203.50 Aligned_cols=241 Identities=13% Similarity=0.081 Sum_probs=173.7
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccccc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAG 85 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~ 85 (310)
.|+. ++.+|.+++ +.+|+++++++|+++ +.++++++.+|.+|.+.|+++|+++|+++|+++|||++|+.
T Consensus 109 ~G~~---v~~v~~~~~--g~~~~~~l~~~i~~~------~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~ 177 (379)
T TIGR03402 109 QGYK---VTYLPVDEE--GRLDLEELRAAITDD------TALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAV 177 (379)
T ss_pred cCCE---EEEEccCCC--CcCCHHHHHHhcCCC------cEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccc
Confidence 4666 899998764 479999999999764 45888999999999999999999999999999999999998
Q ss_pred ccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC
Q 046506 86 SACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR 165 (310)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 165 (310)
+..+.+.. . .++|++++++|| +++|.|+|++++++... ..|.+..... ....+.+..
T Consensus 178 g~~~~~~~-----~-~~~D~~~~s~~K-~~gp~G~g~l~v~~~~~------~~p~~~g~~~----------~~~~~~gt~ 234 (379)
T TIGR03402 178 GKIPIDLK-----E-MNIDMLSLSGHK-LHGPKGVGALYIRKGTR------FRPLLRGGHQ----------ERGRRAGTE 234 (379)
T ss_pred cccccCcc-----c-CCCCEEEEcHHH-cCCCCceEEEEECCCCC------CCCcccCCcc----------CCCcCCCCc
Confidence 87765432 1 259999999999 67899999999986531 1222211110 001122222
Q ss_pred --cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcC-CCCeEEecCCC---ceEEEEEEcCCcchhhhhhhhcccc
Q 046506 166 --FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGS-DKRFEVVFPRH---FAVVCFRVSPSAVMDKLKTKYENSL 239 (310)
Q Consensus 166 --~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~-~~~~~v~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~ 239 (310)
...+++.++++.. .++++++.++..++.+++++.|++ ++++++.+++. .++++|++....
T Consensus 235 ~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 300 (379)
T TIGR03402 235 NVPGIVGLGKAAELA-TEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYIE------------- 300 (379)
T ss_pred cHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCCC-------------
Confidence 1234555666554 457788889999999999999985 89999886532 357878776432
Q ss_pred chhHHHHHHHHHHHHHHHHhcCcEEEEEeEE--------------------CCEeEEEEEccCCCCCHHHHHHHHHHHHH
Q 046506 240 LSEEERINEFNRELLESINASGKAYMTHAVL--------------------GGIYAIRFAAGATLTEERHVMVAWTVVQE 299 (310)
Q Consensus 240 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--------------------~~~~~iRis~~~~~~t~edi~~li~~l~~ 299 (310)
..++...|.+.|+ .+..... ...+.+|+|++ ++||++|||+++++|++
T Consensus 301 ----------~~~~~~~l~~~gI-~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~-~~~t~~di~~~~~~l~~ 368 (379)
T TIGR03402 301 ----------GEAILLLLDMEGI-CASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLS-RYNTEEDIDYVLEVLPP 368 (379)
T ss_pred ----------HHHHHHhhccCCE-EEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcC-CCCCHHHHHHHHHHHHH
Confidence 1356666666664 3332110 01368999965 78999999999999999
Q ss_pred HHHHHhh
Q 046506 300 HLEALLS 306 (310)
Q Consensus 300 ~~~~~~~ 306 (310)
++..+.+
T Consensus 369 ~~~~~~~ 375 (379)
T TIGR03402 369 IIARLRA 375 (379)
T ss_pred HHHHHHh
Confidence 8877653
No 27
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.94 E-value=7.6e-25 Score=202.43 Aligned_cols=243 Identities=15% Similarity=0.179 Sum_probs=172.7
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
..|+. ++.||++++ +.+|+++|+++|++. +.++++++++|.+|.+.|+++|+++|+++|+++|+|++|+
T Consensus 112 ~~G~~---v~~v~~~~~--g~~d~~~l~~~i~~~------t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~ 180 (382)
T TIGR03403 112 SLGVE---VTYLPINEQ--GTITAEQVREAITEK------TALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQA 180 (382)
T ss_pred HCCCE---EEEEecCCC--CCCCHHHHHHhcccC------CeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhh
Confidence 45776 999999864 489999999999764 3488899999999999999999999999999999999998
Q ss_pred cccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccC-
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLS- 163 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~- 163 (310)
.+..+.+... .++|++++++||| ++|.|+|++++++...+ .| .+..... .. ..+.+
T Consensus 181 ~g~~~~~~~~------~~~D~~~~s~~K~-~gp~G~g~l~vr~~~~~------~p-~~~g~~~-----~~----~~~~gt 237 (382)
T TIGR03403 181 IGKIPVDVQK------AGVDFLSFSAHKF-HGPKGVGGLYIRKGVEL------TP-LFHGGEH-----MG----GRRSGT 237 (382)
T ss_pred cCCCccCccc------cCCCEEEEcchhh-CCCCceEEEEECCCCCC------CC-cccCCCC-----CC----CcccCC
Confidence 8776654211 2599999999998 56999999999876321 12 1111110 00 01111
Q ss_pred CCc-chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC--C-ceEEEEEEcCCcchhhhhhhhcccc
Q 046506 164 RRF-RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR--H-FAVVCFRVSPSAVMDKLKTKYENSL 239 (310)
Q Consensus 164 ~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~--~-~~~v~~~~~~~~~~~~~~~~~~~~~ 239 (310)
... ..+++..+++.. .+.++...++..++++++.+.|+++++++++++. + .+++.|.+.+..
T Consensus 238 ~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 303 (382)
T TIGR03403 238 LNVPYIVAMGEAMRLA-NEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGVE------------- 303 (382)
T ss_pred cChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCCC-------------
Confidence 112 223555666544 3457888899999999999999999999998653 2 457778776421
Q ss_pred chhHHHHHHHHHHHHHHHHhcCcEEEEEeE--------------EC-----CEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 240 LSEEERINEFNRELLESINASGKAYMTHAV--------------LG-----GIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 240 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------------~~-----~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
.+.+...|.++|+....+.. .+ ..+.+|+|++ ++||++|||+++++|+++
T Consensus 304 ----------~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~-~~~t~~did~~~~~l~~~ 372 (382)
T TIGR03403 304 ----------GEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLS-RFTTEEEIDYTIEVFKKA 372 (382)
T ss_pred ----------HHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECC-CCCCHHHHHHHHHHHHHH
Confidence 13455556666543322110 00 1368999966 689999999999999999
Q ss_pred HHHHhh
Q 046506 301 LEALLS 306 (310)
Q Consensus 301 ~~~~~~ 306 (310)
++++++
T Consensus 373 ~~~~~~ 378 (382)
T TIGR03403 373 VQRLRA 378 (382)
T ss_pred HHHHHh
Confidence 887653
No 28
>PLN02651 cysteine desulfurase
Probab=99.93 E-value=6.1e-25 Score=201.80 Aligned_cols=186 Identities=13% Similarity=0.083 Sum_probs=140.8
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccccc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAG 85 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~ 85 (310)
.|+. ++.+|++++ +.+|+++|+++|+++ +.++++++.+|.+|.+.|+++|+++||++|+++|||++|++
T Consensus 111 ~g~~---v~~v~~~~~--~~~d~~~l~~~i~~~------t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~ 179 (364)
T PLN02651 111 EGFE---VTYLPVKSD--GLVDLDELAAAIRPD------TALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAV 179 (364)
T ss_pred cCCE---EEEEccCCC--CcCCHHHHHHhcCCC------cEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhh
Confidence 4665 889998864 489999999999765 34899999999999999999999999999999999999999
Q ss_pred ccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC
Q 046506 86 SACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR 165 (310)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 165 (310)
+..+.+.. .. ++|++++++||| ++|.|+|+++++++.. .+ ..|.+.. ... +..++.|++
T Consensus 180 g~~~~~~~-----~~-~~D~~~~s~hK~-~gp~G~g~l~v~~~~~-~~---l~p~~~g-~~~---------~~~~~~GT~ 238 (364)
T PLN02651 180 GKIPVDVD-----DL-GVDLMSISGHKI-YGPKGVGALYVRRRPR-VR---LEPLMSG-GGQ---------ERGRRSGTE 238 (364)
T ss_pred CCcccCcc-----cC-CCCEEEechhhh-CCCCceEEEEEcCCCC-CC---CCccccC-CCc---------cCCccCCCc
Confidence 98877532 22 599999999998 7899999999997632 11 1222221 110 011223333
Q ss_pred --cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcC-CCCeEEecC--CC---ceEEEEEEcC
Q 046506 166 --FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGS-DKRFEVVFP--RH---FAVVCFRVSP 224 (310)
Q Consensus 166 --~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~-~~~~~v~~~--~~---~~~v~~~~~~ 224 (310)
...+++.++++.+.. +.+++.++..++++++.+.|++ +|+++++++ +. .++++|.+.+
T Consensus 239 ~~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~ 304 (364)
T PLN02651 239 NTPLVVGLGAACELAMK-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAY 304 (364)
T ss_pred cHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCC
Confidence 234677778877743 5588899999999999999985 689999875 22 4588998865
No 29
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.93 E-value=8.7e-25 Score=195.45 Aligned_cols=260 Identities=18% Similarity=0.228 Sum_probs=206.6
Q ss_pred CcceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHH-hCcEEEe
Q 046506 1 KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQ-FGIWVHV 79 (310)
Q Consensus 1 kaa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~-~g~~l~v 79 (310)
|+|+.+++. ++.||.+++ .+.+|+..+.+.+++++ ++++...+++.+|.++|+++|+++.-+ +++++||
T Consensus 185 K~a~yf~v~---l~~V~~~~~-~~~~D~~k~~~~i~eNt------i~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHv 254 (491)
T KOG1383|consen 185 KAARYFEVE---LREVPLDEG-DYRVDPGKVVRMIDENT------IMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHV 254 (491)
T ss_pred HHHhhEEEE---EEeeecccc-ceEecHHHHHHHhccce------EEEEEEcCCCCccchhhHHHHHHHHHHHhCCceee
Confidence 678999998 999999984 79999999999999985 489999999999999999999999999 9999999
Q ss_pred ecccccccccChhhh--hhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 80 DAAYAGSACICPEFR--HFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 80 D~a~~~~~~~~~~~~--~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
|++.|++..+.-.+. .+..+..++-+++.++||...+|.|+|.++.++++.+...+...+.|.++- +..
T Consensus 255 Da~~GgFi~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~---------y~s 325 (491)
T KOG1383|consen 255 DACLGGFINPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGI---------YAS 325 (491)
T ss_pred cccCccccccccccCccccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCcc---------ccC
Confidence 999998887621111 223445679999999999999999999999999987666555556666543 345
Q ss_pred ceeccCCC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhc
Q 046506 158 WQITLSRR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 158 ~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~ 236 (310)
.++.+||+ ...++.|+++-.+|.+||.+..++|.+.++.++++|++++++.++++|..+++.+.-..-+
T Consensus 326 ~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~~~---------- 395 (491)
T KOG1383|consen 326 PTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSNDVN---------- 395 (491)
T ss_pred cccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCccc----------
Confidence 68899988 4568899999999999999999999999999999999999999998876665554322211
Q ss_pred cccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 237 NSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
. -++.+.|.+.|+..-..+.+. .+.++++--++.++-.|+|+.-|++++.++.
T Consensus 396 -----------i--~elsd~l~~~GW~lnalq~P~---a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~ 448 (491)
T KOG1383|consen 396 -----------I--FELSDLLRKKGWILNALQFPA---AIHICVTRVHAREDVADRFVADIRKVVEELK 448 (491)
T ss_pred -----------h--hhhhHHHHhcCcCccccCCCC---ceEEEEEeeeccHHHHHHHHHHHHHHHHHHH
Confidence 0 367788888887554444332 4455555434455557899999999888875
No 30
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.92 E-value=3.8e-24 Score=198.71 Aligned_cols=242 Identities=13% Similarity=0.117 Sum_probs=167.8
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|+. ++.++.+++ .+.+|+++|+++|++. +.+|++++++|++|.+.|+++|+++|++||++++||++
T Consensus 125 ~~~~g~~---~~~~~~~~~-~~~~~~~~l~~~i~~~------~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a 194 (397)
T TIGR01976 125 AERAGAK---VKWARVDEA-TGELHPDDLASLLSPR------TRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAV 194 (397)
T ss_pred HHhcCCE---EEEEecccc-CCCcCHHHHHHhcCCC------ceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehh
Confidence 3456776 899998863 3589999999999764 34899999999999999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceecc
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITL 162 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 162 (310)
|+.+..+.+.. . .++|++++++|||++ |. +|+++++++ .+.........+..... ...++.
T Consensus 195 ~~~~~~~~~~~-----~-~~~d~~~~s~~K~~g-~~-~G~l~~~~~-~~~~l~~~~~~~~~~~~----------~~~~~~ 255 (397)
T TIGR01976 195 HYAPHGLIDVQ-----A-TGADFLTCSAYKFFG-PH-MGILWGRPE-LLMNLPPYKLTFSYDTG----------PERFEL 255 (397)
T ss_pred hhccccCCCHH-----H-cCCCEEEEechhhcC-Cc-eEEEEEcHH-HHhhCCCccccCccCCC----------cchhcC
Confidence 97665443321 1 258999999999985 53 788887655 33322221112211111 112333
Q ss_pred CCC-c-chHHHHHHHHHhCHH--------------HHHHHHHHHHHHHHHHHHHHcCCCCeEEecC----CCceEEEEEE
Q 046506 163 SRR-F-RSLKLWFVLRNYGVA--------------NLRHFLRSHVNMAKLFERLVGSDKRFEVVFP----RHFAVVCFRV 222 (310)
Q Consensus 163 ~~~-~-~~~~~~~~l~~~~~~--------------~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~----~~~~~v~~~~ 222 (310)
|.+ + ..+++.++++.+... .+++..++..++++++++.|.++++++++.+ ..++++.|.+
T Consensus 256 gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (397)
T TIGR01976 256 GTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTV 335 (397)
T ss_pred CCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEe
Confidence 433 2 335566666655322 3677788899999999999999888998764 2577888876
Q ss_pred cCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeE-----------ECCEeEEEEEccCCCCCHHHHH
Q 046506 223 SPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAV-----------LGGIYAIRFAAGATLTEERHVM 291 (310)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-----------~~~~~~iRis~~~~~~t~edi~ 291 (310)
.+.+ ..++.++|.++|........ ....+++|+|++ +++|++||+
T Consensus 336 ~~~~-----------------------~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~-~~~t~~di~ 391 (397)
T TIGR01976 336 HGLP-----------------------PQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLA-HYNTAEEVD 391 (397)
T ss_pred CCcC-----------------------HHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEee-ccCCHHHHH
Confidence 5421 13577778777654332211 123468999966 689999999
Q ss_pred HHHHHH
Q 046506 292 VAWTVV 297 (310)
Q Consensus 292 ~li~~l 297 (310)
+++++|
T Consensus 392 ~l~~~l 397 (397)
T TIGR01976 392 RLLEAL 397 (397)
T ss_pred HHHHhC
Confidence 999875
No 31
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.92 E-value=4.5e-24 Score=196.56 Aligned_cols=246 Identities=13% Similarity=0.110 Sum_probs=172.8
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+..|+. +++|+.+++ +.+|+++|+++|.+. +.+|++++++|++|.+.|+++|.++|++||+++|+|++|
T Consensus 110 ~~~g~~---~~~v~~~~~--~~~d~~~l~~~l~~~------~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~ 178 (373)
T cd06453 110 ERTGAK---LKVVPVDDD--GQLDLEALEKLLTER------TKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQ 178 (373)
T ss_pred hhcCcE---EEEeecCCC--CCcCHHHHHHHhcCC------ceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhh
Confidence 355776 999999854 489999999999764 458889999999999999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCcccccccccc-----ccccCCCCc
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATES-----KQVVDYKDW 158 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~-----~~~~~~~~~ 158 (310)
+.+..+.+.. . .++|++++++|||+++ .|+|+++++++ .++... .+..+..... ...+.....
T Consensus 179 ~~~~~~~~~~-----~-~~~d~~~~s~~K~~~~-~g~g~~~~~~~-~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~ 246 (373)
T cd06453 179 SAGHMPVDVQ-----D-LGCDFLAFSGHKMLGP-TGIGVLYGKEE-LLEEMP----PYGGGGEMIEEVSFEETTYADLPH 246 (373)
T ss_pred hcCceeeecc-----c-cCCCEEEeccccccCC-CCcEEEEEchH-HhhcCC----CeecCCCccccccccccccCCCcc
Confidence 8776654321 1 2589999999999887 78898887654 332221 1111110000 001111111
Q ss_pred eeccCCC--cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC--CceEEEEEEcCCcchhhhhhh
Q 046506 159 QITLSRR--FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR--HFAVVCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 159 ~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~--~~~~v~~~~~~~~~~~~~~~~ 234 (310)
.+..+.+ ...++++.+++.+...+++++.++..++++++++.|.++++++++.++ ..++++|.+...+
T Consensus 247 ~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 318 (373)
T cd06453 247 KFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEGIH-------- 318 (373)
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEECCcC--------
Confidence 2222222 235677888888877789999999999999999999999899987543 4667778765421
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeE---------ECCEeEEEEEccCCCCCHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESINASGKAYMTHAV---------LGGIYAIRFAAGATLTEERHVMVAWTVV 297 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---------~~~~~~iRis~~~~~~t~edi~~li~~l 297 (310)
..++.+.|.+.|.. +.+.. .+..+.+|+|++ +++|++|+|+++++|
T Consensus 319 ---------------~~~i~~~l~~~gi~-i~~g~~~~~~~~~~~~~~~~iRis~~-~~~t~~di~~~~~~l 373 (373)
T cd06453 319 ---------------PHDVATILDQYGIA-VRAGHHCAQPLMRRLGVPGTVRASFG-LYNTEEEIDALVEAL 373 (373)
T ss_pred ---------------HHHHHHHHHHCCEE-eccCccchhHHHHHhCCCCeEEEEec-CCCCHHHHHHHHhhC
Confidence 13567777776643 33211 112468999966 689999999999875
No 32
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.92 E-value=1.9e-24 Score=199.17 Aligned_cols=250 Identities=10% Similarity=-0.059 Sum_probs=170.0
Q ss_pred eecCC-CCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 4 QIVGI-DVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 4 ~~~g~-~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+.+|+ . ++.++.++++ .+|+++++. + ..|+++|++|.+|.+.|+++|++ |++|++++||++
T Consensus 111 ~~~g~~~---v~~~~~~~g~--~~d~~~i~~-----~------~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~ 172 (378)
T PRK03080 111 KQLKLED---PRVLEADYGS--LPDLSAVDF-----D------RDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDAT 172 (378)
T ss_pred hhcCCCC---ceEeccCCCC--CCCHhhcCC-----C------CCEEEEecCCccceeccchhhcc--ccCCCeEEEecc
Confidence 44577 5 8888887644 778776432 1 25899999999999999999999 899999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCC-----ccccccccccccccCCCC
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNP-----EYLKNKATESKQVVDYKD 157 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~-----~y~~~~~~~~~~~~~~~~ 157 (310)
|+.++.+.+.. .+|++++++|||+++|.|+|+++++++. +.+..+... .|+.... ......
T Consensus 173 qs~G~~pidv~--------~iD~~~~s~~K~l~~P~G~g~l~v~~~~-~~~~~p~~~~~~~~~~~~~~~-----~~~~~~ 238 (378)
T PRK03080 173 SAAFALPLDWS--------KLDVYTFSWQKVLGGEGGHGMAILSPRA-VERLESYTPARPIPKFFRLTK-----GGKAIE 238 (378)
T ss_pred cccccCCCCHH--------HCcEEEEehhhhCCCCCceEEEEECHHH-HHhhhcccCCCCCchhheecc-----chHHhh
Confidence 99999988742 2799999999999999999999998763 333222111 1111000 000011
Q ss_pred ceeccCCC--c---chHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHcCCCCeEEecC-C--Cc-eEEEEEEcCCcc
Q 046506 158 WQITLSRR--F---RSLKLWFVLRNYGVA-NLRHFLRSHVNMAKLFERLVGSDKRFEVVFP-R--HF-AVVCFRVSPSAV 227 (310)
Q Consensus 158 ~~~~~~~~--~---~~~~~~~~l~~~~~~-~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~--~~-~~v~~~~~~~~~ 227 (310)
..++.+.+ . ...++.++++.+... |++++.+|+.++++++++.|+++++++++.+ + +. .+++|.+++.+
T Consensus 239 ~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~- 317 (378)
T PRK03080 239 NSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQ- 317 (378)
T ss_pred hhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCch-
Confidence 11222222 1 123446688888776 8999999999999999999999877777642 2 23 47778765410
Q ss_pred hhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 228 MDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
.....++...+.+++.+...+......+.+|+|++ .+++++||++++++|+++++.++.
T Consensus 318 -------------------~~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~-~~~t~~di~~l~~al~~~~~~~~~ 376 (378)
T PRK03080 318 -------------------AAVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWCG-PTVEPADVEALTPWLDWAFERLKA 376 (378)
T ss_pred -------------------HHHHHHHHHHHHHcCCeeccccccCCCCcEEEecC-CCCCHHHHHHHHHHHHHHHHHHhh
Confidence 01112344455555543322221112468999955 689999999999999998877643
No 33
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.92 E-value=2.1e-24 Score=200.73 Aligned_cols=242 Identities=14% Similarity=0.158 Sum_probs=165.5
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccccc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAG 85 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~ 85 (310)
.|+. ++.||++++ +.+|+++|+++|.++ +.++++++.+|++|.+.|+++|+++|+++|+++|||++|+.
T Consensus 115 ~g~~---v~~v~~~~~--~~~d~~~l~~~l~~~------~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~ 183 (402)
T TIGR02006 115 EGFE---VTYLPPKSN--GLIDLEELKAAIRDD------TILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSV 183 (402)
T ss_pred cCCE---EEEEccCCC--CcCCHHHHHHhcCCC------CEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhc
Confidence 4666 999999864 489999999999654 35899999999999999999999999999999999999998
Q ss_pred ccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC
Q 046506 86 SACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR 165 (310)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 165 (310)
+..+.+.. . .++|++++++||++ +|.|+|+++++++... .. .|. ...... ...++.+..
T Consensus 184 g~~~~~~~-----~-~~~D~~~~s~~K~~-gp~G~G~l~~~~~~~~-~~---~~~-~~g~~~---------~~~~~~gt~ 242 (402)
T TIGR02006 184 GKIPINVN-----E-LKVDLMSISGHKIY-GPKGIGALYVRRKPRV-RL---EAL-IHGGGH---------ERGMRSGTL 242 (402)
T ss_pred CCcccCcc-----c-cCCCEEEEehhhhc-CCCceEEEEEccCCCC-CC---Cce-ecCCCc---------cCCccCCCc
Confidence 87765432 1 25999999999965 6999999999976321 11 111 111100 001122222
Q ss_pred --cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC--Cc-eEEEEEEcCCcchhhhhhhhccccc
Q 046506 166 --FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR--HF-AVVCFRVSPSAVMDKLKTKYENSLL 240 (310)
Q Consensus 166 --~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~--~~-~~v~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
...+++..+++.+ .++++++.++..++++++++.|++++++.+.+++ +. +++.+.+....
T Consensus 243 ~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~~-------------- 307 (402)
T TIGR02006 243 PTHQIVGMGEAFRIA-KEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNYVE-------------- 307 (402)
T ss_pred cHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeCcC--------------
Confidence 2234555666655 3578888999999999999999999999887532 22 22233333211
Q ss_pred hhHHHHHHHHHHHHHHHH----hcCcEEEEEeEE--------------CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 241 SEEERINEFNRELLESIN----ASGKAYMTHAVL--------------GGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 241 ~~~~~~~~~~~~l~~~l~----~~g~~~~~~~~~--------------~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
. +++...+. +.|.. |.+... ...+++|+|++ ++||++|||+++++|+++.+
T Consensus 308 -~--------~~~~~~l~~i~v~~G~~-c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~-~~~t~edid~l~~~l~~~~~ 376 (402)
T TIGR02006 308 -G--------ESLIMALKDLAVSSGSA-CTSASLEPSYVLRALGINDELAHSSIRFTIG-RFTTEEEIDYAVKLVKSAID 376 (402)
T ss_pred -H--------HHHHHhcCCEEEechhh-cCCCCCCccHHHHHcCCChhhcCceEEEEec-CCCCHHHHHHHHHHHHHHHH
Confidence 0 12222221 12222 221100 11479999966 68999999999999999987
Q ss_pred HHh
Q 046506 303 ALL 305 (310)
Q Consensus 303 ~~~ 305 (310)
.++
T Consensus 377 ~~~ 379 (402)
T TIGR02006 377 KLR 379 (402)
T ss_pred HHH
Confidence 764
No 34
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.92 E-value=1.6e-23 Score=192.27 Aligned_cols=256 Identities=10% Similarity=0.022 Sum_probs=173.7
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|+. ++.+|+++++ .+|+++++++|+++++ +.+++++++.|.+|.+.|+++|+++||+||++++||++
T Consensus 97 a~~~g~~---~~~v~~~~~~--~~d~~~l~~~l~~~~~----~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~ 167 (363)
T TIGR02326 97 AEYLGIP---HHVVDTGEVE--PPDVVEVEAILAADPA----ITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAM 167 (363)
T ss_pred HHHcCCc---eEEEeCCCCC--CCCHHHHHHHHhhCCC----ccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEcc
Confidence 4556776 9999998644 7999999999986432 34688899999999999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceecc
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITL 162 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 162 (310)
|+.+..+.+.. .. ++|++++++|||+++|.|.|+++++++. +.+......++..... ..+..... ..+
T Consensus 168 ~~~g~~~~~~~-----~~-~~D~~~~s~~K~l~~p~G~G~l~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~-~~~ 235 (363)
T TIGR02326 168 SSFGGIPIDIA-----EL-HIDYLISSANKCIQGVPGFGFVIARQAE-LAACKGNARSLSLDLY----DQWRCMED-NHG 235 (363)
T ss_pred ccccCcccchh-----hc-CccEEEecCccccccCCcceEEEECHHH-HHHhhcCCCceeecHH----HHHHHHhc-cCC
Confidence 98877665421 12 5899999999999999999999987663 3332211111100000 00000000 001
Q ss_pred CCC-----cchHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC--CceE-EEEEEcCCcchhhhhh
Q 046506 163 SRR-----FRSLKLWFVLRNYGVA-NLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR--HFAV-VCFRVSPSAVMDKLKT 233 (310)
Q Consensus 163 ~~~-----~~~~~~~~~l~~~~~~-~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~--~~~~-v~~~~~~~~~~~~~~~ 233 (310)
.++ +...++.++++.+..+ +++++.+++.+++.++++.|+++ |++++.++ +.++ ++|.+.+..
T Consensus 236 ~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~------- 307 (363)
T TIGR02326 236 KWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPIITSFYSPEDP------- 307 (363)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCceEEEEECCCCC-------
Confidence 111 2335566677666555 58889999999999999999887 78876543 3444 456654320
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 234 KYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
......+.+.|.++|. .+.+........+|++++ .+++.+|+++++++|++++.
T Consensus 308 -------------~~~~~~v~~~L~~~gi-~v~~g~~~~~~~iRi~~~-~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 308 -------------DYRFADFYQRLKEQGF-VIYPGKVSQVDCFRIGNI-GEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred -------------CCCHHHHHHHHHHCCE-EEECCcCCCCCEEEEecC-CCCCHHHHHHHHHHHHHHhC
Confidence 0001356677777764 444332223468999966 46899999999999988753
No 35
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.91 E-value=1.4e-23 Score=195.01 Aligned_cols=259 Identities=12% Similarity=0.053 Sum_probs=180.5
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHH--HHHhCcEEEee
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDV--AKQFGIWVHVD 80 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l--~~~~g~~l~vD 80 (310)
++..|+. ++.++.++++ .+|+++++++|++.+. ..+.+|++++++|.+|.+.|+++|+++ ||++|++++||
T Consensus 103 ~~~~g~~---v~~v~~~~~~--~~~~~~l~~~l~~~~~--~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD 175 (401)
T PLN02409 103 MQRLNFD---VDVVESPWGQ--GADLDILKSKLRQDTN--HKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVD 175 (401)
T ss_pred HHHcCCc---eEEEECCCCC--CCCHHHHHHHHhhCcC--CCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEE
Confidence 4456776 9999998643 5899999999986320 025589999999999999999999999 99999999999
Q ss_pred cccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhcc--CCccccccccccccccCCCCc
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLST--NPEYLKNKATESKQVVDYKDW 158 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~--~~~y~~~~~~~~~~~~~~~~~ 158 (310)
++|+.+..+.+... .++|++++++|||+++|.|+|+++++++ .+.+.... .+.|..... ..++...
T Consensus 176 ~v~s~g~~~id~~~------~~~D~~~~s~~K~l~~P~G~G~l~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 243 (401)
T PLN02409 176 GVSSIGALDFRMDE------WGVDVALTGSQKALSLPTGLGIVCASPK-ALEASKTAKSPRVFFDWAD-----YLKFYKL 243 (401)
T ss_pred cccccCCccccccc------cCccEEEEcCccccCcCCCcceeEECHH-HHHHHhcCCCCCeecCHHH-----HHHHHhc
Confidence 99998777654211 1599999999999999999999998766 33333221 111221100 0000000
Q ss_pred -eeccCCC--cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC---Cc-eEEEEEEcCCcchhhh
Q 046506 159 -QITLSRR--FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR---HF-AVVCFRVSPSAVMDKL 231 (310)
Q Consensus 159 -~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~---~~-~~v~~~~~~~~~~~~~ 231 (310)
......+ ...+++.++++.+...|++++.++..++++++++.|.++ |++++.+. .. .+++|.++.. .
T Consensus 244 g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~~~~s~~v~~~~~p~~-~---- 317 (401)
T PLN02409 244 GTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLCTKKPEWRSDTVTAVVVPEG-I---- 317 (401)
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcccceEEEeCCCC-C----
Confidence 0000111 123566677777777899999999999999999999887 89887642 23 3445655431 0
Q ss_pred hhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEEC-CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 232 KTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLG-GIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+ ..++.+.+.++.++.+.+.... ....+|++.+. +++++|+..++++|++.+.++
T Consensus 318 ----------~-------~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g-~~~~~~~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 318 ----------D-------SAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLG-NVNELQLLGALAGVEMVLKDV 373 (401)
T ss_pred ----------C-------HHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCC-CCCHHHHHHHHHHHHHHHHHc
Confidence 0 1346666655555666655433 35789999775 799999999999999988764
No 36
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.91 E-value=2.4e-23 Score=190.62 Aligned_cols=253 Identities=13% Similarity=0.031 Sum_probs=171.1
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|.. ++++|.+++ +.+|++++++.|++. .+.+|++++++|.+|.+.|+++|+++|+++|+++++|++
T Consensus 93 ~~~~g~~---~~~v~~~~~--~~~~~~~l~~~i~~~-----~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~ 162 (356)
T cd06451 93 AERYGAD---VDVVEKPWG--EAVSPEEIAEALEQH-----DIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAV 162 (356)
T ss_pred HHHhCCC---eEEeecCCC--CCCCHHHHHHHHhcc-----CCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeee
Confidence 3456766 999999864 489999999999762 145788888899999999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhc--cCCccccccccccccccCCCCce-
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLS--TNPEYLKNKATESKQVVDYKDWQ- 159 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~--~~~~y~~~~~~~~~~~~~~~~~~- 159 (310)
|+.+..+.+.. . .++|+++.++||||++|.|+|+++++++ .+..... ....+...... ...+....
T Consensus 163 ~~~g~~~~~~~-----~-~~~d~~~~s~~K~l~~p~g~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 231 (356)
T cd06451 163 SSLGGEPFRMD-----E-WGVDVAYTGSQKALGAPPGLGPIAFSER-ALERIKKKTKPKGFYFDLLL----LLKYWGEGY 231 (356)
T ss_pred hhccCcccccc-----c-cCccEEEecCchhccCCCCcceeEECHH-HHHHHHhcCCCCceeecHHH----HHhhhcccC
Confidence 98765543321 1 2589999999999999999999998765 3333321 11111110000 00000000
Q ss_pred eccCCC-c-chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC--ceEEE-EEEcCCcchhhhhhh
Q 046506 160 ITLSRR-F-RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH--FAVVC-FRVSPSAVMDKLKTK 234 (310)
Q Consensus 160 ~~~~~~-~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~--~~~v~-~~~~~~~~~~~~~~~ 234 (310)
...+.. . ...++.++++.+...+++++.++..++++++++.|.+. ++++..++. .+++. +.+.+. .
T Consensus 232 ~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~------- 302 (356)
T cd06451 232 SYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL-GLKLLAKPELRSPTVTAVLVPEG-V------- 302 (356)
T ss_pred CCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCCceEEEECCCC-C-------
Confidence 111111 1 13455677777777788999999999999999999987 888875432 44443 333321 0
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhc-CcEEEEEe-EECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESINAS-GKAYMTHA-VLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~-~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
...++.+.|.++ |+ ++.+. .....+++|+|++ +++|+|||++++++|++++
T Consensus 303 --------------~~~~~~~~L~~~~gI-~~~~g~~~~~~~~iRis~~-~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 303 --------------DGDEVVRRLMKRYNI-EIAGGLGPTAGKVFRIGHM-GEATREDVLGVLSALEEAL 355 (356)
T ss_pred --------------CHHHHHHHHHHhCCE-EEecccccccCCEEEEecC-CCCCHHHHHHHHHHHHHHh
Confidence 013567777777 64 44432 2123469999966 6799999999999998864
No 37
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.91 E-value=7.4e-23 Score=204.85 Aligned_cols=261 Identities=15% Similarity=0.077 Sum_probs=174.6
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeec
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
+++++|+. +++||++++ +.+|+++|+++|+++. ..+..|+++.+++..+..+||++|+++||++|+++||||
T Consensus 606 sa~~~G~~---vv~v~~d~~--G~iD~~~L~~~i~~~~---~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDg 677 (954)
T PRK05367 606 SAVMAGMK---VVVVACDEN--GNIDLDDLRAKAEEHA---DNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDG 677 (954)
T ss_pred HHHHCCCE---EEEECCCCC--CCcCHHHHHHHHhccC---CCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEEC
Confidence 46778887 999999865 4899999999997641 125677788877764445899999999999999999999
Q ss_pred ccccccccChhhhhhhcCCCCCCeeeeecccccccccceE-----EEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 82 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCC-----CLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g-----~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
|++.+....... +..++|++++++||||++|.|+| +++++.. +.+.+ |....... ...+
T Consensus 678 A~~~al~~l~~p-----g~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~--l~p~l---pg~~v~~~----~~~~-- 741 (954)
T PRK05367 678 ANMNAQVGLARP-----GDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAH--LAPFL---PGHPVQIA----GGET-- 741 (954)
T ss_pred cChhhccCCCCh-----hhcCCCEEEecCcccCCCCcCCCCCceEEEeeccc--ccccC---CCCccCcC----CCCC--
Confidence 997665444321 12369999999999998887755 8888743 22222 12111000 0000
Q ss_pred CceeccCCCc----chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC--CCceEEEEEEcCCcchhh
Q 046506 157 DWQITLSRRF----RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP--RHFAVVCFRVSPSAVMDK 230 (310)
Q Consensus 157 ~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~~~~~v~~~~~~~~~~~~ 230 (310)
......+.++ .+...|+.++.+|.+|+.+..+++..+|+|++++|++...+...++ +..+-+.|.+.+...
T Consensus 742 ~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~--- 818 (954)
T PRK05367 742 GIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVAHECILDLRPLKE--- 818 (954)
T ss_pred CcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcccceEEEeecccc---
Confidence 0011111222 2345788889999999999999999999999999987433322222 223334444432100
Q ss_pred hhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 231 LKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
..+..+.++.++|.+.|...... .+...+.+|++++ -.++++|+|+|+++|+.+..+..
T Consensus 819 --------------~~g~~~~di~krL~d~G~~~~t~-~~pv~~~l~i~pt-E~~s~~elDr~~~al~~i~~e~~ 877 (954)
T PRK05367 819 --------------STGITVDDIAKRLIDYGFHAPTM-SFPVAGTLMVEPT-ESESKAELDRFCDAMIAIRAEID 877 (954)
T ss_pred --------------cCCCCHHHHHHHHHHCCCeEeec-CCccCCEEEEEee-ecCCHHHHHHHHHHHHHHHHHHH
Confidence 00112357889998887543332 2334668999977 57999999999999999987764
No 38
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.90 E-value=6.3e-23 Score=194.33 Aligned_cols=259 Identities=15% Similarity=0.093 Sum_probs=167.1
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCccccc-CChHHHHHHHHHhCcEEEeec
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAV-DTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~-~pl~~I~~l~~~~g~~l~vD~ 81 (310)
++..|+. ++.+|++++ +.+|+++|+++|++++ .+|++++++ .+|.+ +|+++|+++||++|++++||+
T Consensus 178 ~~~~G~~---vv~v~~~~~--~~~D~e~L~~~i~~~t------~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~ 245 (481)
T PRK04366 178 AAMAGFK---VVEIPSNED--GLVDLEALKAAVGEDT------AALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDG 245 (481)
T ss_pred HHHcCCE---EEEeecCCC--CCcCHHHHHhhcccCC------eEEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEe
Confidence 4567776 999999753 5899999999997653 366666655 78987 589999999999999999999
Q ss_pred ccccccccChhhhhhhcCCCCCCeeeeecccccccccce-----EEEEEeCchhHHhhhccCCccccccccccccccCC-
Q 046506 82 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDC-----CCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDY- 155 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~-----g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~- 155 (310)
|+..+.+.... . +-.++|++++++||||++|.|+ |+++++++ .. +.+ |+.+...... .....+
T Consensus 246 a~~~~~~g~~~----~-~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~-~~-~~l---p~~~v~~~g~-~~~l~~~ 314 (481)
T PRK04366 246 ANLNAILGKAR----P-GDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEE-LA-PFL---PVPVVEKDGD-RYRLDYD 314 (481)
T ss_pred cChhhhcccCC----c-cccCCCEEEEechhhcCCCCCCCCCCeeeeeehhh-hH-hhC---CCCeeeccCC-ceeeccc
Confidence 99755332111 1 1126999999999999988655 57888765 22 332 2111111100 000011
Q ss_pred CCceeccCCC-----cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEec-CCCceEEEEEEcCCcchh
Q 046506 156 KDWQITLSRR-----FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVF-PRHFAVVCFRVSPSAVMD 229 (310)
Q Consensus 156 ~~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~-~~~~~~v~~~~~~~~~~~ 229 (310)
++..+...++ ..++.+|..+..+|.+|+.++.+++..++++++++|+++ +++.. .+..+.+.|.......
T Consensus 315 r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~~-- 390 (481)
T PRK04366 315 RPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI--YDLPYDRPCMHEFVLSGKKLKE-- 390 (481)
T ss_pred ccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--CcccCCCCeeEEEEEECccccc--
Confidence 1111111111 124677788888999999999999999999999999986 33322 2223333333211000
Q ss_pred hhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE-CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 230 KLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVL-GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
. +....++.++|.+.|......... ...+.+|+|++ .++|++|||+++++|+++..+..
T Consensus 391 ------------~----g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~-e~~t~edid~l~~~l~~i~~~~~ 450 (481)
T PRK04366 391 ------------T----GVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPT-ETESKETLDAFIAAMKQIAEEAK 450 (481)
T ss_pred ------------c----CCCHHHHHHHHHHCCccCCccccccccCCeEEEccc-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 011256888888887542211111 12458999966 68999999999999999987764
No 39
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.90 E-value=1.7e-22 Score=187.53 Aligned_cols=240 Identities=13% Similarity=0.043 Sum_probs=165.2
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChh
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPE 92 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~ 92 (310)
++..++++. .+.+|++++++.+.+.+ | .+++++.++. |...|+++|+++|++||++++||+||+.|.+....
T Consensus 195 ~~~y~vd~~-~g~iD~d~l~~~~~~~~-----p-lvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~ 266 (493)
T PRK13580 195 QRSYGVDPD-TGLLDYDEIAALAREFK-----P-LILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKV 266 (493)
T ss_pred eEecccCcc-cCccCHHHHHHHHhhcC-----C-EEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceecccc
Confidence 344555543 46899999999998864 3 6777788887 44779999999999999999999999999887544
Q ss_pred hhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHH
Q 046506 93 FRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLW 172 (310)
Q Consensus 93 ~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (310)
+........++|++++++||+|++|.| |++++++. .. +.+....+|+++... ....++..
T Consensus 267 ~~~~~~~~~~~D~vtgT~hKaL~GP~G-G~I~~~~~-l~-~~L~~a~P~i~gg~l-----------------~p~iAA~a 326 (493)
T PRK13580 267 FTGDEDPVPHADIVTTTTHKTLRGPRG-GLVLAKKE-YA-DAVDKGCPLVLGGPL-----------------PHVMAAKA 326 (493)
T ss_pred chhhcCCCCCCcEEEeCChhhccCCCe-EEEEecHH-HH-HHHhhCCCcccCCCc-----------------cHHHHHHH
Confidence 321111234699999999999988985 77776644 33 322222244443321 11223333
Q ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEec-CCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHH
Q 046506 173 FVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVF-PRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNR 251 (310)
Q Consensus 173 ~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (310)
.++..+......++.++.++++++|++.|.+. |+.++. ..+++++.+.+.+.. .-..
T Consensus 327 vAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~-G~~vv~ggTdshIV~V~lg~~~---------------------~~g~ 384 (493)
T PRK13580 327 VALAEARTPEFQKYAQQVVDNARALAEGFLKR-GARLVTGGTDNHLVLIDVTSFG---------------------LTGR 384 (493)
T ss_pred HHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc-CCCccCCCCCCCEEEEEeCCHH---------------------HHHH
Confidence 34444433445678999999999999999986 898864 356788888886531 1113
Q ss_pred HHHHHHHhcCcEEEE----EeEECC---EeEEEEEccCC---CCCHHHHHHHHHHHHHHHHH
Q 046506 252 ELLESINASGKAYMT----HAVLGG---IYAIRFAAGAT---LTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 252 ~l~~~l~~~g~~~~~----~~~~~~---~~~iRis~~~~---~~t~edi~~li~~l~~~~~~ 303 (310)
.+.+.|.+.|+ ++. |++..+ ...||++++.. ..+++||+.+.+.|.+++..
T Consensus 385 ~a~~~L~e~GI-~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~ 445 (493)
T PRK13580 385 QAESALLDAGI-VTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSN 445 (493)
T ss_pred HHHHHHHHCCe-EEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHh
Confidence 45567777774 433 445455 78899996532 23699999999999888764
No 40
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.90 E-value=2.9e-22 Score=197.73 Aligned_cols=261 Identities=15% Similarity=0.131 Sum_probs=180.2
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC-hHHHHHHHHHhCcEEEee
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT-LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p-l~~I~~l~~~~g~~l~vD 80 (310)
+|++.|+. |+.||++++ |.+|+++|+++|++. +..+.+|++++++| .|.++| |++|+++||++|.+++||
T Consensus 594 sa~~~G~~---Vv~V~~d~~--G~iDle~L~~~i~~~---~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VD 664 (939)
T TIGR00461 594 SAAMAGMQ---VVPVNCDQD--GNIDLVDLKNKAEQH---GDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLD 664 (939)
T ss_pred HHHHCCCE---EEEeccCCC--CCcCHHHHHHHHhhc---CCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEE
Confidence 46678887 999999865 499999999999862 12366888999988 688877 999999999999999999
Q ss_pred cccccccccChhhhhhhcCCCCCCeeeeecccccccccce-----EEEEEeCchhHHhhhccCCccccccccccccccCC
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDC-----CCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDY 155 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~-----g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 155 (310)
||+..+....... +..++|++++++||+|++|.|+ |++.+++. +.+.++... +... .+..+ ..
T Consensus 665 gAq~~al~~l~~P-----g~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~--L~~~lPg~~--v~~t-~d~~g--re 732 (939)
T TIGR00461 665 GANMNAQVGLTSP-----GDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH--LIPFLPKHD--VVSM-ITGIG--GS 732 (939)
T ss_pred ecChhhCCCCCCc-----cccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh--chhhcCCCc--cccc-ccCCC--Cc
Confidence 9996644433211 2236999999999999965555 99999854 333332111 1110 00000 00
Q ss_pred CCceeccCCCcch----HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC----CCceEEEEEEcCCcc
Q 046506 156 KDWQITLSRRFRS----LKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP----RHFAVVCFRVSPSAV 227 (310)
Q Consensus 156 ~~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~----~~~~~v~~~~~~~~~ 227 (310)
.......++.+.. +..|+.++.+|.+|+.+..+....+|.|++++|.+ +++++.+ +..+-+++++.+..
T Consensus 733 q~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~~~~~hEfv~~~~~~~- 809 (939)
T TIGR00461 733 KSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD--HYPILFVGTLKHVAHECILDLRPLK- 809 (939)
T ss_pred cccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc--cCcccccCCCCceeEEEEEeccchh-
Confidence 1112223334443 78899999999999999999999999999999987 5666543 23455667776421
Q ss_pred hhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeE-ECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 228 MDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAV-LGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
...+..+.++.++|.+.|......+. ..+.-.||. +- -++++|+|+|++++.++..+..
T Consensus 810 ----------------~~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiep--TE-~eskeelD~f~~al~~I~~e~~ 869 (939)
T TIGR00461 810 ----------------AKTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEP--TE-SESLEELDRFCDAMIAIKEEIN 869 (939)
T ss_pred ----------------hhcCCCHHHHHHHHHhCCeeccccCCccCCeEEEEe--ec-cCCHHHHHHHHHHHHHHHHHHH
Confidence 11123457899999999865433221 123334554 43 5899999999999999887764
No 41
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.90 E-value=9.2e-22 Score=182.10 Aligned_cols=260 Identities=16% Similarity=0.144 Sum_probs=169.7
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHc-CCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeec
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEA-GLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~-~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
++..|+. ++++|.+.+..+.+|+++++++|++..+. ...+.+|+++++++++|.+.|+++|+++||+||+++|||+
T Consensus 119 ~~~~G~~---~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~ 195 (387)
T PRK09331 119 AERAGLN---VREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNG 195 (387)
T ss_pred HHHcCCE---EEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEEC
Confidence 4556776 99999832224589999999999864221 1236689999999999999999999999999999999999
Q ss_pred ccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceec
Q 046506 82 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
||+.+.++.+... .++|++++++|||+++|.|+|+++++++ .+........+|..... . .+.
T Consensus 196 a~~~g~~~~~~~~------~g~D~~~~s~~K~l~~~~~~G~l~~~~~-~i~~~~~~~~~~~~~~~----------~-~~~ 257 (387)
T PRK09331 196 AYTVGRMPVDGKK------LGADFIVGSGHKSMAASAPSGVLATTEE-YADKVFRTSRKFGVKEV----------E-LLG 257 (387)
T ss_pred CcccCCcCCCHHH------cCCCEEEeeCcccccCCCCEEEEEECHH-HHhhcccccCCCcccce----------e-eec
Confidence 9998877665321 1589999999999999999999887654 44333222222221100 0 011
Q ss_pred cCCC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC--CCceEEEEEEcCCcchhhhhhhhccc
Q 046506 162 LSRR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP--RHFAVVCFRVSPSAVMDKLKTKYENS 238 (310)
Q Consensus 162 ~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~ 238 (310)
++.+ ..++.+++++..+. ...+++++..++++++++.|.+++|++++.+ ...+++.+...... .
T Consensus 258 ~~~~~~~~~~~~aal~~~~--~~~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~--~--------- 324 (387)
T PRK09331 258 CTLRGAPLVTLMASFPHVV--ERVKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFD--E--------- 324 (387)
T ss_pred eecCchHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchh--H---------
Confidence 1111 23344455554331 1224567778899999999999999999852 23555555543110 0
Q ss_pred cchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 239 LLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
..........++.+.|.++|..... ......+|+.. ...+++|+++++++|+++.+++
T Consensus 325 ---~~~~~~~~~~~~~~~L~~~gI~~~~---~~~~~i~ri~~--~g~t~~di~~l~~aL~~i~~~~ 382 (387)
T PRK09331 325 ---IAKKHKRRGFFLYEELKKRGIHGIK---PGATKEFKLST--YGLTWEQVEYVADAFKEIAEKY 382 (387)
T ss_pred ---HhhhccccchhHHHHHHHcCceEEc---cCCceEEEEEe--ccCCHHHHHHHHHHHHHHHHhc
Confidence 0000011124577888778764221 12345667663 3478999999999999987654
No 42
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.90 E-value=1.9e-22 Score=185.47 Aligned_cols=261 Identities=13% Similarity=0.095 Sum_probs=172.7
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|+. ++.||.+++ +.+|+++++++|++.++ ..++++++++|.+|.+.|+++|+++|+++|++++||++
T Consensus 99 ~~~~g~~---~~~i~~~~~--~~~d~~~l~~~l~~~~~----~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~ 169 (368)
T PRK13479 99 AEYLGIA---HVVLDTGED--EPPDAAEVEAALAADPR----ITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAM 169 (368)
T ss_pred HHHcCCc---EEEEECCCC--CCCCHHHHHHHHHhCCC----CcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcc
Confidence 4556776 999999864 37999999999975432 34788899999999999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceecc
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITL 162 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 162 (310)
|+.+..+.+. .. .++|++++++|||+++|.|+|+++++++ .+........++..................+
T Consensus 170 ~~~g~~~~~~-----~~-~~~d~~v~s~~K~l~g~~G~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 240 (368)
T PRK13479 170 SSFGAIPIDI-----AE-LGIDALISSANKCIEGVPGFGFVIARRS-ELEACKGNSRSLSLDLYDQWAYMEKTGQWRF-- 240 (368)
T ss_pred cccCCccccc-----cc-cCceEEEecCccccccCCCceEEEECHH-HHHHhhcCCCCeeecHHHHHhhhcccCCCCC--
Confidence 8776544331 11 1589999999999999999999998765 3333222111211110000000000000001
Q ss_pred CCC-cchHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC--Cc-eEEEEEEcCCcchhhhhhhhcc
Q 046506 163 SRR-FRSLKLWFVLRNYGVA-NLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR--HF-AVVCFRVSPSAVMDKLKTKYEN 237 (310)
Q Consensus 163 ~~~-~~~~~~~~~l~~~~~~-~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~--~~-~~v~~~~~~~~~~~~~~~~~~~ 237 (310)
+.. ...+++.++++.+..+ ++++..++..++++++++.|+++ |++++.++ .. .+++|.+....
T Consensus 241 t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~----------- 308 (368)
T PRK13479 241 TPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQSPIIVTFHAPADP----------- 308 (368)
T ss_pred CCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcCceEEEEECCCCC-----------
Confidence 111 1234556677666444 47888899999999999999987 88776442 22 24566654321
Q ss_pred ccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 238 SLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.....++.+.|.++|.. +.+........+|++.+ .+++++|+++++++|++++.++
T Consensus 309 ---------~~~~~~l~~~L~~~gi~-v~~g~~~~~~~iRis~~-~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 309 ---------AYDFKEFYERLKEQGFV-IYPGKLTQVDTFRIGCI-GDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred ---------CcCHHHHHHHHHHCCEE-EecCCCCCCCEEEEecC-CCCCHHHHHHHHHHHHHHHHHc
Confidence 00013677778788754 33322222457999955 4689999999999999988765
No 43
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.90 E-value=3.2e-22 Score=199.57 Aligned_cols=264 Identities=13% Similarity=0.018 Sum_probs=177.8
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeec
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
++++.|+. |++||+|++| .+|+++|+++|+++++ ...+|++++++|..|.++||++|+++||++|+.++|||
T Consensus 632 ~a~~~G~~---vv~v~~d~~G--~vDle~L~~~i~~~~~---~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDg 703 (993)
T PLN02414 632 SAAMCGMK---IVVVGTDAKG--NINIEELRKAAEAHKD---NLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDG 703 (993)
T ss_pred HHHHCCCE---EEEeccCCCC--CcCHHHHHHHHhccCC---CeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEe
Confidence 35567887 9999998654 8999999999986432 14689999999999999999999999999999999999
Q ss_pred ccccccccChhhhhhhcCCCCCCeeeeecccccccccc-----eEEEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 82 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD-----CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-----~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
||..+....... .. .++|++++++||||++|.| +|++++++. +.+.+ |.+...... +..+..
T Consensus 704 Aq~~a~~~l~~p----~~-~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~--L~p~l---Pg~~v~~~~---~~~~r~ 770 (993)
T PLN02414 704 ANMNAQVGLTSP----GF-IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFL---PSHPVVPTG---GIPRPE 770 (993)
T ss_pred cCHHhccCcCCc----cc-cCCCEEEecCCccCCcCcccCCCCeeeEEEchh--hcccC---CCCccccCC---Cccccc
Confidence 997766333211 11 2699999999999997765 889988754 22322 222111100 111100
Q ss_pred CceeccCCCc-------chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC--CCceEEEEEEcCCcc
Q 046506 157 DWQITLSRRF-------RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP--RHFAVVCFRVSPSAV 227 (310)
Q Consensus 157 ~~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~~~~~v~~~~~~~~~ 227 (310)
...-.|+++. .+...|..+..+|.+|+.+..++...++.|++++|.+..++...++ +-++-+.+.+.+..
T Consensus 771 ~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~- 849 (993)
T PLN02414 771 KTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFK- 849 (993)
T ss_pred CCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEeccccc-
Confidence 0111233321 1245567778889999999999999999999999987444444333 22223333333210
Q ss_pred hhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 228 MDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
+ .. ..-..++.++|.+.|..... ..+...+.+|++++ -+++++|+|+|+++|..+..+..
T Consensus 850 -------~-----~~----g~~~~di~krL~d~Gihapt-~~~pv~~~lmiepT-E~~skeelDrf~~al~~i~~e~~ 909 (993)
T PLN02414 850 -------N-----TA----GIEPEDVAKRLMDYGFHAPT-MSWPVPGTLMIEPT-ESESKAELDRFCDALISIREEIA 909 (993)
T ss_pred -------c-----cc----CCCHHHHHHHHHHcCcEEee-eccccCCEEEEEee-eeCCHHHHHHHHHHHHHHHHHHH
Confidence 0 00 00115688888877753222 22345778999977 57999999999999999887654
No 44
>PRK02948 cysteine desulfurase; Provisional
Probab=99.90 E-value=2e-22 Score=186.26 Aligned_cols=244 Identities=11% Similarity=0.100 Sum_probs=166.7
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+..|+. ++.+|++++ +.+|+++|++++++. +.+|++++++|++|.+.|+++|+++|+++|+++|||++|
T Consensus 109 ~~~g~~---v~~v~~~~~--~~~d~~~l~~~l~~~------~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~ 177 (381)
T PRK02948 109 ESQGYT---VTEIPVDKS--GLIRLVDLERAITPD------TVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQ 177 (381)
T ss_pred HhCCCE---EEEEeeCCC--CCCCHHHHHHhcCCC------CEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChh
Confidence 345666 899998864 489999999999654 458999999999999999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccC
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLS 163 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 163 (310)
+.+..+.+. .. .++|++++++||++ +|.|+|++++++...+... ...... ...++.+
T Consensus 178 ~~g~~~~~~-----~~-~~~d~~~~s~~K~~-gp~G~G~l~~~~~~~~~~~-------~~~~~~---------~~~~~~~ 234 (381)
T PRK02948 178 TFGKLPIDV-----FE-MGIDSLSVSAHKIY-GPKGVGAVYINPQVRWKPV-------FPGTTH---------EKGFRPG 234 (381)
T ss_pred hccccccCc-----cc-CCCCEEEecHHhcC-CCCcEEEEEEcCCCCCCCc-------ccCCCC---------CCCcCCC
Confidence 877655432 11 25999999999975 5889999998765211110 000000 0011111
Q ss_pred CC--cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEec--CC---CceEEEEEEcCCcchhhhhhhhc
Q 046506 164 RR--FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVF--PR---HFAVVCFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 164 ~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~--~~---~~~~v~~~~~~~~~~~~~~~~~~ 236 (310)
.. ...+++.++++.. .++.++..++..++++++.+.|+++ ++++.. .+ ...+++|.+.+..
T Consensus 235 t~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~~~~~~~~~~~~i~~~~~~~~~---------- 302 (381)
T PRK02948 235 TVNVPGIAAFLTAAENI-LKNMQEESLRFKELRSYFLEQIQTL-PLPIEVEGHSTSCLPHIIGVTIKGIE---------- 302 (381)
T ss_pred CccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEeCCCccCcCCEEEEEeCCCC----------
Confidence 11 1234445555543 2567888999999999999999987 554431 11 1346667665421
Q ss_pred cccchhHHHHHHHHHHHHHHHHhcCcEEEEEeE--------------------ECCEeEEEEEccCCCCCHHHHHHHHHH
Q 046506 237 NSLLSEEERINEFNRELLESINASGKAYMTHAV--------------------LGGIYAIRFAAGATLTEERHVMVAWTV 296 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------------------~~~~~~iRis~~~~~~t~edi~~li~~ 296 (310)
..++...|.++|+ ++.... ....+++|+|++ ++||++|+++++++
T Consensus 303 -------------~~~~~~~l~~~gI-~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~-~~~t~~di~~l~~~ 367 (381)
T PRK02948 303 -------------GQYTMLECNRRGI-AISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFG-QQTTKDQIDTTIHA 367 (381)
T ss_pred -------------HHHHHHhcccCCE-EEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcC-CCCCHHHHHHHHHH
Confidence 1345556656664 433211 012478999966 68999999999999
Q ss_pred HHHHHHHHhhcc
Q 046506 297 VQEHLEALLSAS 308 (310)
Q Consensus 297 l~~~~~~~~~~~ 308 (310)
|+++.+.+..+.
T Consensus 368 l~~~~~~~~~~~ 379 (381)
T PRK02948 368 LETIGNQFYRGV 379 (381)
T ss_pred HHHHHHHHhccc
Confidence 999988776543
No 45
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.90 E-value=5.5e-22 Score=186.91 Aligned_cols=237 Identities=11% Similarity=0.109 Sum_probs=158.1
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChh
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPE 92 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~ 92 (310)
+..++++++ +.+|+++|++++.+.+ |.++++. .+.+|.+.|+++|+++||++|+++|||+||++|.++.+.
T Consensus 158 ~~~~~~~~~--g~id~~~L~~~l~~~~-----~~lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~ 228 (452)
T PTZ00094 158 SLPYQVNEK--GLIDYDKLEELAKAFR-----PKLIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGV 228 (452)
T ss_pred eeecccCCC--CCcCHHHHHHHHHHhC-----CCEEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCC
Confidence 334556653 5899999999997532 3345443 346899999999999999999999999999999887653
Q ss_pred hhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC-cchHHH
Q 046506 93 FRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKL 171 (310)
Q Consensus 93 ~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 171 (310)
.. ..+.++|++++++||||++|.| |++++++.. .......-....+. .++++.. ...+++
T Consensus 229 ~~---~~~~~~D~l~~S~hK~l~GP~G-g~l~~~~~~-~~~l~~~~~~~~~p--------------~~~G~~~~~~iaal 289 (452)
T PTZ00094 229 LP---SPFPYADVVTTTTHKSLRGPRS-GLIFYRKKV-KPDIENKINEAVFP--------------GLQGGPHNHQIAAI 289 (452)
T ss_pred CC---CCCCCCcEEEcCCccCCCCCCc-eEEEEeccc-chHHHHhhccccCC--------------CCCCCchHHHHHHH
Confidence 22 1123699999999999999997 777776542 11110000000100 1122222 245667
Q ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC---CceEEEEEEcCCcchhhhhhhhccccchhHHHHHH
Q 046506 172 WFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR---HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINE 248 (310)
Q Consensus 172 ~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (310)
.++++.+...+.+++.++..+++++|++.|.+. |+++..+. ...++.|...+.+
T Consensus 290 ~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~-g~~v~~~~~~~~~~~v~~~~~~~~---------------------- 346 (452)
T PTZ00094 290 AVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR-GYDLVTGGTDNHLVLVDLRPFGIT---------------------- 346 (452)
T ss_pred HHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCCCceEeecCCcCCCC----------------------
Confidence 777877766778889999999999999999885 88887532 2223333333211
Q ss_pred HHHHHHHHHHhcCcEEEEE-eEEC-----CEeEEEEEccCCCCC----HHHHHHHHHHHHHHHHH
Q 046506 249 FNRELLESINASGKAYMTH-AVLG-----GIYAIRFAAGATLTE----ERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 249 ~~~~l~~~l~~~g~~~~~~-~~~~-----~~~~iRis~~~~~~t----~edi~~li~~l~~~~~~ 303 (310)
.+.+...|.+.|+ +++. ..+. ..+++|+|++ .+|+ ++||++++++|++++..
T Consensus 347 -~~~~~~~L~~~gI-~vs~~~~p~~~~~~~~~~vRis~~-~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 347 -GSKMEKLLDAVNI-SVNKNTIPGDKSALNPSGVRLGTP-ALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred -HHHHHHHHHHCCc-EEecccCCCCCcCCCCCeEEECCH-HHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 1345566655554 4432 1111 2478999954 5676 99999999999998864
No 46
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.89 E-value=7.1e-23 Score=183.71 Aligned_cols=247 Identities=16% Similarity=0.136 Sum_probs=161.3
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+--|+. |+++|++. .+..|++.+++.|++.| ++|.+.+.+|+.|.++|++||+.+|+++|+.+|+|+||
T Consensus 152 ~~~g~~---Vt~lpv~~--~~~~d~~~~~~~i~~~T------~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQ 220 (428)
T KOG1549|consen 152 QEEGLE---VTYLPVED--SGLVDISKLREAIRSKT------RLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQ 220 (428)
T ss_pred HhcCeE---EEEeccCc--cccccHHHHHHhcCCCc------eEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhh
Confidence 445666 99999994 45999999999999974 59999999999999999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccC
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLS 163 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 163 (310)
+.|..+.+... + ++|++++++|||++.| |+|++|++... ..+...|++.++.... .+..|
T Consensus 221 avG~i~vDV~e-----l-n~D~~s~s~HK~ygp~-~iGaLYvr~~~---~~~~~~p~~~GGgq~r----------~~rsG 280 (428)
T KOG1549|consen 221 AVGKIPVDVQE-----L-NADFLSISAHKIYGPP-GIGALYVRRKR---PRLRVEPPLSGGGQER----------GLRSG 280 (428)
T ss_pred hcCCccccHHH-----c-CchheeeecccccCCC-cceEEEEccCC---CcccccCcccCCcccc----------ccccC
Confidence 99999887533 2 6999999999998755 59999999721 2223445665554321 12222
Q ss_pred CC--cchHHHHHHHHHhCH--HHHHHHHHHHHHHHHHHHHHHcC-CCCeEEecCCC---ceEEEEEEc--CCcchhhhhh
Q 046506 164 RR--FRSLKLWFVLRNYGV--ANLRHFLRSHVNMAKLFERLVGS-DKRFEVVFPRH---FAVVCFRVS--PSAVMDKLKT 233 (310)
Q Consensus 164 ~~--~~~~~~~~~l~~~~~--~~~~~~~~~~~~~a~~l~~~L~~-~~~~~v~~~~~---~~~v~~~~~--~~~~~~~~~~ 233 (310)
.+ ..+..+-.+.+.... ...+.+.. ++...+..++.. .+.+.+.+.+. .+.++|.+. ..-+
T Consensus 281 T~~~~~~~~~gsA~e~~~~~~~~~~~~~~---~~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~~~g~~------ 351 (428)
T KOG1549|consen 281 TVATPLAVGLGSAAEFVNKEMAYDEAIIK---RLSEKLLMGIGQSLPEVTLNGSGKSRYPGLVSLSFPYVEGES------ 351 (428)
T ss_pred CcCchhhhhhHHHHHHHHhhcchhHHHHH---HHHHHHHHHHhhhCchhhccCCcccccccceeeecccccCcc------
Confidence 22 233444555554422 22333333 366666666643 55665554321 234444444 2100
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHhcCcEEEE----Ee---------EECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 234 KYENSLLSEEERINEFNRELLESINASGKAYMT----HA---------VLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~----~~---------~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
+..++.+.....|..+.+ |. .......+|||+.. +|+++|++++++++++.
T Consensus 352 ---------------~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~-y~t~~di~~~~~~i~~~ 415 (428)
T KOG1549|consen 352 ---------------LLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGR-YTTEEDIDYLVDAIKKL 415 (428)
T ss_pred ---------------hhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeee-eCcHHHHHHHHHHHHHH
Confidence 001111222222221111 11 00236789999774 79999999999999999
Q ss_pred HHHHhh
Q 046506 301 LEALLS 306 (310)
Q Consensus 301 ~~~~~~ 306 (310)
.+.+.+
T Consensus 416 v~~~~~ 421 (428)
T KOG1549|consen 416 VSLLRE 421 (428)
T ss_pred HHhccc
Confidence 887643
No 47
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.89 E-value=8e-22 Score=177.45 Aligned_cols=258 Identities=13% Similarity=0.077 Sum_probs=189.6
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeec
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
.|+.+|.. ++.+.+.++. .+||++++++|+++.+ ...|.++|+.|.+|.+.|+++|+++|++||++++||+
T Consensus 98 ia~~~g~~---v~~~~~~wg~--~v~p~~v~~~L~~~~~----~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDa 168 (383)
T COG0075 98 IAERYGAE---VVVLEVEWGE--AVDPEEVEEALDKDPD----IKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDA 168 (383)
T ss_pred HHHHhCCc---eEEEeCCCCC--CCCHHHHHHHHhcCCC----ccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEe
Confidence 35567776 9999999865 8999999999996533 4489999999999999999999999999999999999
Q ss_pred ccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCc-cccccccccccccCCCCcee
Q 046506 82 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPE-YLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~~~~~~ 160 (310)
.-+.|..+++... . ++|++..+.+|++++|.|.+++.++++.+ ......+.+ |...-. .+..+.+..
T Consensus 169 VsS~Gg~~~~vd~-----w-giDv~itgSQK~l~~PPGla~v~~S~~a~-e~~~~~~~~~~ylDL~----~~~~~~~~~- 236 (383)
T COG0075 169 VSSLGGEPLKVDE-----W-GIDVAITGSQKALGAPPGLAFVAVSERAL-EAIEERKHPSFYLDLK----KWLKYMEKK- 236 (383)
T ss_pred cccCCCcccchhh-----c-CccEEEecCchhccCCCccceeEECHHHH-HHHhcCCCCceeecHH----HHHHHHhhc-
Confidence 9888877665322 1 59999999999999999999999988754 333322222 222111 111111110
Q ss_pred ccCCCc-----chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC--CceEEEEEEcCCcchhhhhh
Q 046506 161 TLSRRF-----RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR--HFAVVCFRVSPSAVMDKLKT 233 (310)
Q Consensus 161 ~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~--~~~~v~~~~~~~~~~~~~~~ 233 (310)
+..++ ...++..+++.+..+|++++.+|+..+++.++++|+++ |++++..+ .+++++....|.++
T Consensus 237 -~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~P~g~------ 308 (383)
T COG0075 237 -GSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKVPEGV------ 308 (383)
T ss_pred -CCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEECCCCC------
Confidence 12222 23677788888889999999999999999999999998 99988633 35555544444321
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE-CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 234 KYENSLLSEEERINEFNRELLESINASGKAYMTHAVL-GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+ ..++...+.+++.+.+++... -....+||..+. +.+.+|+..++++|...+.++
T Consensus 309 -------------~--~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG-~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 309 -------------D--DKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMG-NVRPEDVLAALAALEAALREL 364 (383)
T ss_pred -------------C--cHHHHHHHHHhCCEEecccccccCccEEEEecCc-cCCHHHHHHHHHHHHHHHHHc
Confidence 0 123334566665565554432 345799999997 799999999999999998876
No 48
>PRK14012 cysteine desulfurase; Provisional
Probab=99.89 E-value=2.5e-22 Score=186.95 Aligned_cols=240 Identities=16% Similarity=0.155 Sum_probs=161.0
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccccc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAG 85 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~ 85 (310)
.|+. +++++++++ +.+|+++|+++|+++ +.++++++.+|++|.+.|+++|+++||++|+++++|+||+.
T Consensus 117 ~g~~---~~~v~~~~~--g~~d~~~l~~~i~~~------t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~ 185 (404)
T PRK14012 117 EGFE---VTYLDPQSN--GIIDLEKLEAAMRDD------TILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSV 185 (404)
T ss_pred CCCE---EEEEccCCC--CcCCHHHHHHhcCCC------CEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhc
Confidence 3665 899998864 489999999999765 35899999999999999999999999999999999999998
Q ss_pred ccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC
Q 046506 86 SACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR 165 (310)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 165 (310)
+..+.+.. . .++|++++++||+ ++|.|+|+++++++... +. .|.+... +. ...++.+..
T Consensus 186 g~~~~~~~-----~-~~~D~~~~s~~K~-~gp~g~G~l~~~~~~~~-~~---~~~~~g~-~~---------~~~~~~gt~ 244 (404)
T PRK14012 186 GKVPIDLS-----K-LKVDLMSFSAHKI-YGPKGIGALYVRRKPRV-RL---EAQMHGG-GH---------ERGMRSGTL 244 (404)
T ss_pred CCcccCcc-----c-CCCCEEEEehhhc-cCCCceEEEEEecCCCC-CC---CceecCC-Cc---------cCCccCCCc
Confidence 87765421 1 2599999999995 46889999999876422 11 1111111 10 001111211
Q ss_pred --cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC--C-ce--EEEEEEcCCcchhhhhhhhccc
Q 046506 166 --FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR--H-FA--VVCFRVSPSAVMDKLKTKYENS 238 (310)
Q Consensus 166 --~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~--~-~~--~v~~~~~~~~~~~~~~~~~~~~ 238 (310)
...+++.+++... ..+.+++.++..++++++.+.|++++++.+.+.. . .+ .++|...+.
T Consensus 245 ~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~------------- 310 (404)
T PRK14012 245 PTHQIVGMGEAARIA-KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVEG------------- 310 (404)
T ss_pred CHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcCH-------------
Confidence 1223444555544 3466778899999999999999999998876431 1 22 344443221
Q ss_pred cchhHHHHHHHHHHHHHHHHh----cCcEEEEEeE---------E-----CCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 239 LLSEEERINEFNRELLESINA----SGKAYMTHAV---------L-----GGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~l~~----~g~~~~~~~~---------~-----~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
.++...+.. .|..+ .+.. . ...+.||+|++ +++|++|||+++++|+++
T Consensus 311 ------------~~~~~~l~~~~i~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~iRls~~-~~~t~~dvd~~~~~l~~~ 376 (404)
T PRK14012 311 ------------ESLIMALKDLAVSSGSAC-TSASLEPSYVLRALGLNDELAHSSIRFSLG-RFTTEEEIDYAIELVRKS 376 (404)
T ss_pred ------------HHHHHhCCCeEEEchhhh-CCCCCCCCHHHHHcCCChhhcCceEEEEec-CCCCHHHHHHHHHHHHHH
Confidence 123332321 11111 1110 0 12468999966 679999999999999998
Q ss_pred HHHHh
Q 046506 301 LEALL 305 (310)
Q Consensus 301 ~~~~~ 305 (310)
++.++
T Consensus 377 ~~~~~ 381 (404)
T PRK14012 377 IGKLR 381 (404)
T ss_pred HHHHH
Confidence 87663
No 49
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.89 E-value=6.1e-22 Score=197.88 Aligned_cols=269 Identities=11% Similarity=0.020 Sum_probs=172.1
Q ss_pred cCCCCCCEEEEecCCC------CCcccCH--HHHHHHHHHHH----HcCCCcEEEEEeccCCcccccCChHHHHHHHHHh
Q 046506 6 VGIDVKNFRAIKTTKS------SSYGLSP--DSLMAKINSDV----EAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF 73 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~------~~~~id~--~~Le~~i~~~~----~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~ 73 (310)
.|+. +++++++.. +.+.+++ ++|++.+++.. .....+.+|++++.+|.+|.+.|+++|..+++..
T Consensus 145 ~G~~---v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~ 221 (805)
T PLN02724 145 KGAA---AIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQ 221 (805)
T ss_pred cCCe---EEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhc
Confidence 4665 888887621 1234544 66777653110 0011245999999999999999999876555532
Q ss_pred --------CcEEEeecccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCcccccc
Q 046506 74 --------GIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNK 145 (310)
Q Consensus 74 --------g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~ 145 (310)
+++++||+||+++..+.+... + ++|++++|+|||+++|.|+|++|++++. +.. ..|.+.++.
T Consensus 222 ~~~~~~~g~~~v~vDaaQ~~g~~piDv~~-----~-~~Dfl~~S~HK~~GgP~G~G~L~vr~~~-~~~---l~p~~~GGg 291 (805)
T PLN02724 222 HSNFSKSGRWMVLLDAAKGCGTSPPDLSR-----Y-PADFVVVSFYKIFGYPTGLGALLVRRDA-AKL---LKKKYFGGG 291 (805)
T ss_pred ccccccCcceEEEeehhhhcCCCCCChhh-----c-CCCEEEEecceeccCCCCceEEEEehhh-hhh---hcCCccCCC
Confidence 367999999999999887432 2 5999999999999999999999999763 222 123444332
Q ss_pred cccc---c-c---ccCCCCceeccCCC--cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCC------CeEEe
Q 046506 146 ATES---K-Q---VVDYKDWQITLSRR--FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDK------RFEVV 210 (310)
Q Consensus 146 ~~~~---~-~---~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~------~~~v~ 210 (310)
.... . . .+......++.|++ ...+++.++++.+...+++++.++..++++++.+.|++++ +++++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iy 371 (805)
T PLN02724 292 TVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLY 371 (805)
T ss_pred ceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEc
Confidence 2100 0 0 01112334555554 3456777888888666899999999999999999999886 58888
Q ss_pred cCC--------CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEe--------------
Q 046506 211 FPR--------HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHA-------------- 268 (310)
Q Consensus 211 ~~~--------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-------------- 268 (310)
++. +.++++|.+.+.+-. .....++..+.. ......+.|. +|.+.
T Consensus 372 g~~~~~~~~~~r~~ivsFnv~~~~~~-----------~v~~~~v~~l~~-~~gI~vR~G~-~Ca~~~~~~~lg~~~~~l~ 438 (805)
T PLN02724 372 GNHTFKLEFHIQGPIVTFNLKRADGS-----------WVGHREVEKLAS-LSGIQLRTGC-FCNPGACAKYLGLSHKDLQ 438 (805)
T ss_pred CCCCCCCCcccccCEEEEEEEcCCCC-----------EeCHHHHHHHHH-hcCcEEeecc-ccCchHHHHHcCCCHHHHH
Confidence 642 468999999874310 000111111110 0111122221 22111
Q ss_pred --------------EEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 269 --------------VLG--GIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 269 --------------~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
... ..+++|+|+. ++||++|||+|+++|++..
T Consensus 439 ~~~~~~~~c~~~~~~~~~~~~G~vRvS~g-~ynt~eDvd~lv~~l~~~~ 486 (805)
T PLN02724 439 ANFEAGHVCWDDQDVIHGRPTGAVRVSFG-YMSTFEDCQKFIDFIISSF 486 (805)
T ss_pred HHhhcCCccCchhheecCcccceEEEEcC-ccCCHHHHHHHHHHHHHHh
Confidence 011 1389999976 7899999999999999855
No 50
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.89 E-value=8.9e-22 Score=179.87 Aligned_cols=255 Identities=11% Similarity=0.080 Sum_probs=168.3
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|+. ++.++.+++ +.+|+++++++++++++ ..+++.++.+|.+|.+.|+++|+++|++||++++||++
T Consensus 93 a~~~g~~---~~~i~~~~~--~~~d~~~l~~~l~~~~~----~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~ 163 (355)
T TIGR03301 93 CEYLGIP---HTDLNFSEY--EPPDLNRIEEALAADPD----ITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAM 163 (355)
T ss_pred HHHcCCc---eEEEecCCC--CCCCHHHHHHHHHhCCC----ceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEec
Confidence 4557777 899998754 47999999999976432 45778888999999999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCC--cee
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD--WQI 160 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~--~~~ 160 (310)
++.+..+.+. ... ++|+++.++|||+++|.|+|+++++++ .+........++...... .+.+.. ...
T Consensus 164 ~s~g~~~~~~-----~~~-~~d~~~~s~~K~l~~~~G~g~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 232 (355)
T TIGR03301 164 SSFGAIPIDI-----EEL-DVDALIASANKCLEGVPGFGFVIARRD-LLEASAGNARSLYLDLYD----QWAYMEKTGKW 232 (355)
T ss_pred cccCCcccch-----hhc-CccEEEecCCcccccCCceeEEEECHH-HHHHhhCCCCCceeeHHH----HHHHhhhcCCC
Confidence 8766554321 111 589999999999998989999988765 333322111111111100 000000 000
Q ss_pred ccCCC-cchHHHHHHHHHhCHHH-HHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC--ce-EEEEEEcCCcchhhhhhhh
Q 046506 161 TLSRR-FRSLKLWFVLRNYGVAN-LRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH--FA-VVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 161 ~~~~~-~~~~~~~~~l~~~~~~~-~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~--~~-~v~~~~~~~~~~~~~~~~~ 235 (310)
..+.. ....++..+++.+..++ +++..++..++++++.+.|.++ +++++.++. .+ ++++.+++..
T Consensus 233 ~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~--------- 302 (355)
T TIGR03301 233 RFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-GFQPLLPERWQSPIIVSFLYPDDP--------- 302 (355)
T ss_pred CCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCCCCcEEEEECCCCC---------
Confidence 00111 12244455666665555 8888899999999999999886 787664432 23 3456554310
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
.....++.++|.++|. .+.+........+|++++ .+++++|+++++++|+++
T Consensus 303 -----------~~~~~~~~~~l~~~gi-~i~~~~~~~~~~iRis~~-~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 303 -----------DFDFDDFYQELKERGF-VIYPGKLTLADTFRIGTI-GEIDAADIERLLEAIKDA 354 (355)
T ss_pred -----------cchHHHHHHHHHHCCE-EEECCccccccEEEEecC-CCCCHHHHHHHHHHHHhh
Confidence 0112467777877875 444332222368999965 568999999999999864
No 51
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.88 E-value=2.3e-20 Score=171.30 Aligned_cols=255 Identities=14% Similarity=0.123 Sum_probs=166.5
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHc-CCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeec
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEA-GLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~-~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
++..|+. ++.+|.++++.+.+|+++|++++++..+. +..+.+|++++++|++|.+.|+++|+++|+++|++++||+
T Consensus 100 ~~~~g~~---~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~ 176 (361)
T cd06452 100 AERAGLN---VREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNG 176 (361)
T ss_pred HHhcCCE---EEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEEC
Confidence 4566776 99999987545689999999999764321 1125688889999999999999999999999999999999
Q ss_pred ccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceec
Q 046506 82 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
||+.+..+.+... . ++|+++.++||++++|.++|+++++++ .+.+......+| .. ......
T Consensus 177 a~~~g~~~~~~~~-----~-~~d~~~~s~~K~l~~~~~~G~l~~~~~-~~~~l~~~~~~~-~~-----------~~~~~~ 237 (361)
T cd06452 177 AYTVGRMPVSGKE-----L-GADFIVGSGHKSMAASAPIGVLATTEE-WADIVFRTSQMF-KI-----------KEVELL 237 (361)
T ss_pred CcccCCcCCCHHH-----c-CCCEEEecCCccccCCCCeEEEEECHH-HHHHHhcccccc-cc-----------ceeeee
Confidence 9987665443211 1 489999999999998888998887644 443332222111 00 001111
Q ss_pred cCC-C-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEec--CCCceEEEEEEcCCcchhhhhhhhcc
Q 046506 162 LSR-R-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVF--PRHFAVVCFRVSPSAVMDKLKTKYEN 237 (310)
Q Consensus 162 ~~~-~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~--~~~~~~v~~~~~~~~~~~~~~~~~~~ 237 (310)
++. + ..++.+++++... .+. .+..++..++++++++.|+++||++++. +...+++.+...... .
T Consensus 238 ~~~~~~~~~~~~~~al~~~-~~~-~~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~--~-------- 305 (361)
T cd06452 238 GCTLRGAPLVTLMASFPHV-KER-VKRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFD--E-------- 305 (361)
T ss_pred ccccCchHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcc--h--------
Confidence 221 1 2334445555433 222 3445555677899999999999999874 335666766654210 0
Q ss_pred ccchhHHHH-HHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 238 SLLSEEERI-NEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 238 ~~~~~~~~~-~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
.... .....++.+.|.++|.. .. .......+|++.. ..++||++.++++|+++.
T Consensus 306 -----~~~~~~~~~~~~~~~L~~~gI~-~~--~~~~~~~~ri~~~--g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 306 -----IAKKHKRRGYFLYSELKKRGIH-GI--KPGLTRYFKLSTY--GLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred -----hhhhccccchhHHHHHHHcCce-EE--cCCCceEEEEEec--CCCHHHHHHHHHHHHHHh
Confidence 0000 00012577888778754 21 1233457899853 368999999999998754
No 52
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.88 E-value=2.4e-21 Score=180.03 Aligned_cols=243 Identities=12% Similarity=0.065 Sum_probs=156.1
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCCh-HHHHHHHHHhCcEEEeecccccccccCh
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTL-KPLCDVAKQFGIWVHVDAAYAGSACICP 91 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl-~~I~~l~~~~g~~l~vD~a~~~~~~~~~ 91 (310)
++.+|.+++ +.+|+++|++++.++ +.+|++++++ .+|.+.|+ ++|+++|++||+++++|++|+.+..+.+
T Consensus 136 ~~~v~~~~~--~~~d~~~l~~~i~~~------t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~ 206 (398)
T cd00613 136 VVEVPSDEG--GTVDLEALKEEVSEE------VAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKP 206 (398)
T ss_pred EEEeccCCC--CCcCHHHHHHhcCCC------eEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCC
Confidence 888998753 479999999999654 3467777765 68999885 9999999999999999999976554443
Q ss_pred hhhhhhcCCCCCCeeeeeccccccccc-----ceEEEEEeCchhHHhhhccCCcccccccccc-c--cccCCC----Cce
Q 046506 92 EFRHFIDGVEGADSFSLNAHKWFFTTL-----DCCCLWVKDPSDLVNSLSTNPEYLKNKATES-K--QVVDYK----DWQ 159 (310)
Q Consensus 92 ~~~~~~~~~~~~D~~~~~~hK~l~~p~-----g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~-~--~~~~~~----~~~ 159 (310)
... .++|++++++|||+ +|. ++|++++++. .+ +.+.. .......... . ...+.. ...
T Consensus 207 ~~~------~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~-~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~r 275 (398)
T cd00613 207 PGE------YGADIVVGNLQKTG-VPHGGGGPGAGFFAVKKE-LV-RFLPG--RLVGVTKDAEGNRAFRLALQTREQHIR 275 (398)
T ss_pred hHH------cCCCEEEeeccccC-CCCCCCCCceeEEEEhhh-hH-hhCCC--CeeccccccCCCcceEEecccchhhcc
Confidence 211 25999999999999 663 4667877654 33 22211 1110000000 0 000000 000
Q ss_pred eccCCC-------cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhh
Q 046506 160 ITLSRR-------FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLK 232 (310)
Q Consensus 160 ~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~ 232 (310)
++.++. ..+..++.++..++.++++++.++..+++++++++|+++++..+...+..++++|.+....
T Consensus 276 ~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~------ 349 (398)
T cd00613 276 REKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLY------ 349 (398)
T ss_pred cccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCeeEEEEEEcCCcc------
Confidence 111111 1224455666777888999999999999999999999886554222234455666654310
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHH
Q 046506 233 TKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVV 297 (310)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l 297 (310)
.....++.+.|.++|.+ +....+.+.+.+|+|++ .++|+||||+++++|
T Consensus 350 --------------~~~~~~~~~~L~~~gi~-~~~~~~~~~~~lRis~~-~~~t~edid~~~~~L 398 (398)
T cd00613 350 --------------GIRAEDLAKALIDGGFH-APTMYLPVDGTLMIEPT-ETETKEELDALLEAL 398 (398)
T ss_pred --------------hHHHHHHHHhhhhcCcc-ccccccCCCCeEEEEcC-CCCCHHHHHHHHHhC
Confidence 01124677777777754 33222345679999955 789999999999864
No 53
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.87 E-value=3.7e-20 Score=170.45 Aligned_cols=257 Identities=13% Similarity=0.105 Sum_probs=164.6
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcC-CCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeec
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAG-LIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~-~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
++..|.. ++.+|.+++.++.+|+++|+++|++.+... ..+.+|+++++++++|.+.|+++|+++|++||++++||+
T Consensus 107 ~~~~g~~---~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDe 183 (370)
T TIGR02539 107 AERAGLN---VKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNC 183 (370)
T ss_pred HHHcCCE---EEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEEC
Confidence 4556666 889998754457899999999997643211 135688888999999999999999999999999999999
Q ss_pred ccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceec
Q 046506 82 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
||+.+.++.+... .++|+++.++|||++++.++|+++.+++ .++.......+|.... ....
T Consensus 184 a~~~g~~~~~~~~------~~~di~v~s~sK~~~~~g~~G~l~~~~~-~i~~l~~~~~~~~~~~------------~~~~ 244 (370)
T TIGR02539 184 AYTVGRMPVSAKE------IGADFIVGSGHKSMAASGPCGVLGMSEE-WEDIVLRKSRYSPVKE------------VELL 244 (370)
T ss_pred ccccCCcCCCHHH------cCCCEEEeeCcccccCCCCEEEEEECHH-HHhhhcccccCCccce------------eeee
Confidence 9987754332211 1489999999999987777888877543 4433322222222111 0111
Q ss_pred cCCC--cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEec--CCCceEEEEEEcCCcchhhhhhhhcc
Q 046506 162 LSRR--FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVF--PRHFAVVCFRVSPSAVMDKLKTKYEN 237 (310)
Q Consensus 162 ~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~--~~~~~~v~~~~~~~~~~~~~~~~~~~ 237 (310)
++.. ..+..+++++... .+.+ +..++..++++++++.|+++ |++++. ++.++++.+.++....
T Consensus 245 ~~~~~~~~~~~~~~al~~~-~~~l-~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~~---------- 311 (370)
T TIGR02539 245 GCTSRGAPIVTMMASFPHV-VERV-KRWDEEVKKTRWFVAELEDI-GFIQLGQKPKEHDLVKFETPGFHE---------- 311 (370)
T ss_pred cccccccHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHhC-CcEEEccCCCcCceEEEECCchhH----------
Confidence 1111 1223333333321 1222 33445566678999999987 788753 5567888776542100
Q ss_pred ccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 238 SLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
....+ ......+.+.|.++|.+.+.+ .....+|+|++ ..+++|+++++++|+++.++
T Consensus 312 ---~~~~~-~~~~~~~~~~L~e~GI~~ir~---~~~~~iRis~~--~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 312 ---IAQKH-KRRGYFLYEELKKRGIHGIRS---GQTKYFKLSVY--GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred ---Hhhhh-ccccHHHHHHHHhCCCccccC---CcceEEEEEec--CCCHHHHHHHHHHHHHHHHh
Confidence 00000 111245778888888641222 23468999964 35899999999999987654
No 54
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.86 E-value=8.1e-21 Score=166.50 Aligned_cols=234 Identities=19% Similarity=0.181 Sum_probs=150.2
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHHHHcC-CCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEeeccccccccc
Q 046506 14 RAIKTTKSSSYGLSPDSLMAKINSDVEAG-LIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVDAAYAGSACI 89 (310)
Q Consensus 14 ~~v~~~~~~~~~id~~~Le~~i~~~~~~~-~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD~a~~~~~~~ 89 (310)
..++..++.+++++++++++.|......+ .+| .++.....|..|++.| |++|+++||+||++||+|||.-+.++.
T Consensus 100 ~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~-~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~v 178 (342)
T COG2008 100 QKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTP-LAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALV 178 (342)
T ss_pred ceeccCCCCCCCcCHHHHHHhhcCCCcccCCCc-eEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHH
Confidence 34555554456999999999998732222 344 4555455558899877 556888999999999999998666544
Q ss_pred ChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCC--Ccc
Q 046506 90 CPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSR--RFR 167 (310)
Q Consensus 90 ~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~--~~~ 167 (310)
... .....-..++|++++++.|.++.|.|. +++.+++..+++ .|...... ++.| |+.
T Consensus 179 alg-~~~~~~~~~~D~v~~~~tK~g~~~~gA--iv~gn~~~~~~a-----~~~rK~~G-------------gl~~k~r~l 237 (342)
T COG2008 179 ALG-VALKTIKSYVDSVSFCLTKGGGAPVGA--IVFGNRDFAKRA-----RRWRKRAG-------------GLMRKARFL 237 (342)
T ss_pred HcC-CCHHHHHhhCCEEEEecccCCcceeee--EEEcCHHHHHHH-----HHHHHHhc-------------ccHhhhhHH
Confidence 321 111111246999999999999998644 555666554433 12111110 0111 122
Q ss_pred hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHH
Q 046506 168 SLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERIN 247 (310)
Q Consensus 168 ~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (310)
+++... ++...-+....+|..++|++|.+.+.+.||+++..++++|+|.++++...
T Consensus 238 aA~~~~---~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~~--------------------- 293 (342)
T COG2008 238 AAQGLY---ALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPESA--------------------- 293 (342)
T ss_pred HHHHHH---HHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECChHH---------------------
Confidence 222222 23334466667777778999999999889999998899999988776521
Q ss_pred HHHHHHHHHHHhcCcEEEEEeEECCE--eEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 248 EFNRELLESINASGKAYMTHAVLGGI--YAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 248 ~~~~~l~~~l~~~g~~~~~~~~~~~~--~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
+ +.+...+.++.. .++.+. ..+||+ +|+.|++|||+.++..++.+.
T Consensus 294 -----i-~~l~~~~~~~~~-~~~~~~~~~~vRfv-ts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 294 -----I-EALRLAGALFYR-GVLIGAHGEIVRFV-TSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred -----H-HHHHhhchhhee-eeeccCCCceEEEE-eeccCCHHHHHHHHHHHHHhh
Confidence 1 333333332221 222222 479999 779999999999999998764
No 55
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.86 E-value=1.7e-20 Score=184.21 Aligned_cols=258 Identities=14% Similarity=0.077 Sum_probs=169.3
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|+. +++||+|++| .+|+++|+++|++... ....|+++++++..+..+|+++|+++||++|++++||||
T Consensus 608 a~~~Gie---Vv~Vp~D~~G--~iDle~L~a~I~~~~~---~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA 679 (954)
T PRK12566 608 AQMAGMR---VVIVECDPDG--NVDLDDLKAKAAAAGD---RLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGA 679 (954)
T ss_pred HHHCCCE---EEEeccCCCC--CcCHHHHHHHhhccCC---CEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEee
Confidence 4456787 9999998754 8999999999974221 245677788887777678899999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCc---hhHHhhhccCCccccccccccccccCCCCce
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDP---SDLVNSLSTNPEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~---~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 159 (310)
+..+........ . .++|++++++||||++|.|.|+.++..- ..+.+.+...|. .... +. ..+
T Consensus 680 ~~~a~~~l~~Pg----~-~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~-~d~~-----G~-~~r--- 744 (954)
T PRK12566 680 NLNAQVGLARPA----D-IGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPV-VPVE-----GP-DPN--- 744 (954)
T ss_pred ChhhccCCCChh----h-cCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCC-cCCC-----CC-CCC---
Confidence 976555443211 1 2699999999999999999999988762 222222222211 0000 00 000
Q ss_pred eccCCC---c-c---hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC--C-ceEEEEEEcCCcchh
Q 046506 160 ITLSRR---F-R---SLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR--H-FAVVCFRVSPSAVMD 229 (310)
Q Consensus 160 ~~~~~~---~-~---~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~--~-~~~v~~~~~~~~~~~ 229 (310)
++++. + . +...|..++.+|.+ +.+.......++.|++++|.+..++.. .++ . ++-+.+...+..
T Consensus 745 -~ga~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~~-~~~~~~~~hEfii~~~~l~--- 818 (954)
T PRK12566 745 -NGAVSAAPWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVLY-RGRNERVAHECILDLRPLK--- 818 (954)
T ss_pred -CCceeecccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCCc-CCCCCCeeeEEEEEccccc---
Confidence 12221 1 1 34556667778888 777788889999999999987433332 221 1 222333332210
Q ss_pred hhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 230 KLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
+. . ..-..++.++|.+.|.. .....+...+.+|++++ -+++++|+|+|+++|+++..+..
T Consensus 819 -----~~----~-----g~~~~dvakRL~d~Gih-apt~~fPv~~~LmIepT-E~eskeEIDrf~eAL~~I~~e~~ 878 (954)
T PRK12566 819 -----AQ----T-----GISEEDVAKRLMDYGFH-APTMSFPVPGTLMVEPT-ESESKAELDRFVEAMLSIRAEIG 878 (954)
T ss_pred -----cc----c-----CCCHHHHHHHHHHCCcE-EeEEeeccCCEEEEEee-eeCCHHHHHHHHHHHHHHHHHHH
Confidence 00 0 00114688888877643 32234455778999966 57999999999999999987753
No 56
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.86 E-value=4.8e-20 Score=167.33 Aligned_cols=229 Identities=15% Similarity=0.081 Sum_probs=166.1
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhc--CC--
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID--GV-- 100 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~--~~-- 100 (310)
+.|+++||++|.+....+.++.+|+.....+|.|.+.||++|+++|++||++|+||.||+.|.+. +..++... ++
T Consensus 152 HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G-~~GrG~~e~~g~~~ 230 (388)
T COG0156 152 HNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLG-PNGRGLAEHFGLEP 230 (388)
T ss_pred CCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccC-CCCccHHHHhCCCC
Confidence 57889999999885422114578999999999999999999999999999999999999888754 22333322 22
Q ss_pred CCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCH
Q 046506 101 EGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGV 180 (310)
Q Consensus 101 ~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 180 (310)
..+|++..+..|.|+ +.|.++..+....+.......+|++..+.. ++.+.++.++++.+
T Consensus 231 ~~vdi~~gTlsKAlG---s~Gg~v~g~~~~~d~L~~~ar~~ifStalp----------------P~~aaa~~~al~~l-- 289 (388)
T COG0156 231 EEVDIIVGTLGKALG---SSGGYIAGSAALIDYLRNRARPFIFSTALP----------------PAVAAAALAALRIL-- 289 (388)
T ss_pred ccceEEEEEchhhhc---ccCceeeCcHHHHHHHHHhCCceeccCCCC----------------HHHHHHHHHHHHHH--
Confidence 235899999999998 456666677755433344456777765421 12334455555544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhc
Q 046506 181 ANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINAS 260 (310)
Q Consensus 181 ~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 260 (310)
+...+++++.++++.+++..+... ++.+. +..++|+.+.+.+ +....++...|.++
T Consensus 290 ~~~~~~r~~L~~~~~~~~~~~~~~-~~~~~-~s~s~I~pv~~gd----------------------~~~a~~~s~~l~~~ 345 (388)
T COG0156 290 EEGPERRERLQELAAFFRSLLKAL-GLVLL-PSESPIIPVILGD----------------------EERALEASRALLEE 345 (388)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHhc-CCccC-CCCCCeeeeEeCC----------------------HHHHHHHHHHHHHC
Confidence 345678888889999999777654 66653 5678888887776 33445677777778
Q ss_pred CcE---EEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 261 GKA---YMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 261 g~~---~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
|.+ ...|+++.+...+|++++ ...|++||+++++++.++
T Consensus 346 Gi~v~~i~~PTVp~gtarlRi~lt-a~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 346 GIYVSAIRPPTVPKGTARLRITLT-AAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CeeEeeecCCCCCCCcceEEEEec-CCCCHHHHHHHHHHHHhh
Confidence 643 233667789999999977 578999999999999875
No 57
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.85 E-value=6.3e-21 Score=174.42 Aligned_cols=234 Identities=12% Similarity=0.017 Sum_probs=159.8
Q ss_pred EEEEecCCCCCcccCHHHHHH-HHHHHHHcCCCcEEEEEeccCCcccccC-ChHHHHHHHHHhCcEEEeecccccccccC
Q 046506 13 FRAIKTTKSSSYGLSPDSLMA-KINSDVEAGLIPLFLCATIGTTAITAVD-TLKPLCDVAKQFGIWVHVDAAYAGSACIC 90 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~-~i~~~~~~~~~~~~v~~~~~~~~~G~~~-pl~~I~~l~~~~g~~l~vD~a~~~~~~~~ 90 (310)
...++.++. .+..+..++++ +|+++ +.+|.++|+.|.+|.+. ||++| +|++++||+++++++.+.
T Consensus 116 ~~~~~~~~~-~g~~~~~~~~~~~l~~~------~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~i 182 (360)
T PRK05355 116 VNVAASSED-DGFTYIPPLDEWQLSDD------AAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPI 182 (360)
T ss_pred ceEEecccc-cCCCCCCChhhccCCCC------CCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccC
Confidence 355555531 12455555555 66543 45899999999999997 78777 899999999999999888
Q ss_pred hhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC--cch
Q 046506 91 PEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR--FRS 168 (310)
Q Consensus 91 ~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 168 (310)
+.. ..|++++++||+++ |.|.|+++++++.+ .+.-+..+.|+.... +.......+++ ...
T Consensus 183 dv~--------~~d~~~~ssqK~lg-P~Glg~l~~s~~~l-~~~~~~~~~~~~~~~--------~~~~~~~~~Tp~~~~i 244 (360)
T PRK05355 183 DVS--------KFGLIYAGAQKNIG-PAGLTIVIVREDLL-GRALPSIPSMLDYKT--------HADNDSMYNTPPTFAI 244 (360)
T ss_pred CHH--------HccEEEEecccccc-CCceEEEEECHHHH-hhcccCCChHHHHHH--------HHhcCCccCCCcHHHH
Confidence 643 25799999999986 99999999987743 332111111211110 00000011223 245
Q ss_pred HHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHcCCCCeEEecC--CCc-eEEEEEEcCCcchhhhhhhhccccchhHH
Q 046506 169 LKLWFVLRNYGVA-NLRHFLRSHVNMAKLFERLVGSDKRFEVVFP--RHF-AVVCFRVSPSAVMDKLKTKYENSLLSEEE 244 (310)
Q Consensus 169 ~~~~~~l~~~~~~-~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
+++.++++.+..+ |++++.+|+.++++++++.|++++.+..+.+ .+. .+++|.+++.
T Consensus 245 ~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~------------------- 305 (360)
T PRK05355 245 YLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADE------------------- 305 (360)
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCCh-------------------
Confidence 6778888888778 8999999999999999999999864333322 134 4678876652
Q ss_pred HHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 245 RINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 245 ~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
....++.+.+.+.|.++ .... ...+.+|+|+. ++||.|||++|+++|++++.
T Consensus 306 ---~~~~~~~~~~~~~Gi~~-~~~~-~~~g~vRiS~~-~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 306 ---ELDKKFLAEAKAAGLVG-LKGH-RSVGGMRASIY-NAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred ---HHHHHHHHHHHHCCCcc-cCCC-CccCcEEEECC-CCCCHHHHHHHHHHHHHHHH
Confidence 11135556777788664 3322 23478999976 57999999999999999765
No 58
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.85 E-value=2e-20 Score=170.37 Aligned_cols=222 Identities=10% Similarity=-0.007 Sum_probs=154.5
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCC
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGAD 104 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D 104 (310)
.+++++++. ++ .+.+|+++|+.|.+|...| ++++.++++++||+++++++.+.+.. ..|
T Consensus 119 ~~~~~~~~~--~~------~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDavss~g~~~id~~--------~~d 177 (349)
T TIGR01364 119 IPDPSTWEI--SE------DAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADMSSNILSRPIDVS--------KFG 177 (349)
T ss_pred CCCHHhcCC--CC------CCCEEEEcCCCCcccEecc-----eecccCCCeEEEEccccccCccCCHH--------Hcc
Confidence 466666552 22 2558999999999999876 77778899999999999999888643 257
Q ss_pred eeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC--cchHHHHHHHHHhCHH-
Q 046506 105 SFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR--FRSLKLWFVLRNYGVA- 181 (310)
Q Consensus 105 ~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~- 181 (310)
++++++||+++ |.|.|+++++++.+ .+.-+..+.|..... ...... ..+++ ...+++.++++.+..+
T Consensus 178 ~~~~ssqK~lg-P~Glg~l~~s~~~~-~~~~~~~~~~~~~~~-------~~~~~~-~~~Tp~~~~i~al~~al~~l~~~g 247 (349)
T TIGR01364 178 LIYAGAQKNIG-PAGLTVVIVRKDLL-GRASRITPSMLNYKI-------HAENDS-MYNTPPTFAIYVSGLVFKWLKEQG 247 (349)
T ss_pred EEEEecccccC-CCceEEEEECHHHH-hhcccCCCCcchHHH-------HHhcCC-CCCCCcHHHHHHHHHHHHHHHHcC
Confidence 99999999986 99999999987743 332222222211000 000000 11223 2446777888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCeEEecC-C--Cc-eEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSDKRFEVVFP-R--HF-AVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESI 257 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~--~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (310)
|++++.+++.++++++++.|++++|+..... + +. .+++|.+.+. .+..++.+.+
T Consensus 248 G~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~----------------------~~~~~~~~~~ 305 (349)
T TIGR01364 248 GVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE----------------------ELEKRFLKEA 305 (349)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh----------------------hHhHHHHHHH
Confidence 7999999999999999999999988755532 1 33 4577876642 1124555677
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
.++|. +..+... ..+.+|+|+. .++|+||||.|+++|+++.+
T Consensus 306 ~~~Gi-~~~~~~~-~~g~vRvS~~-~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 306 EERGL-VSLKGHR-SVGGMRASIY-NAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred HHCCC-cccCCcc-ccCeeEEECc-CCCCHHHHHHHHHHHHHHHH
Confidence 77886 4433321 2358999976 57999999999999998764
No 59
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.85 E-value=9.8e-21 Score=173.20 Aligned_cols=241 Identities=15% Similarity=0.082 Sum_probs=158.4
Q ss_pred ceecCCCCCCEEEEecCCCCCcccC-HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeec
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLS-PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id-~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
++..|+. ++++++++++. ..+ ++..+..++++ +.+|+++|++|.+|.+. . ++++.||++++||+
T Consensus 106 a~~~g~~---~~~~~~~~~g~-~~~~~~~~~~~~~~~------~~lV~~~h~~t~tG~~~--~---~i~~~~g~~~~VDa 170 (355)
T cd00611 106 AKRYGGV---VVIVAAKEEGK-YTKIPDVETWDLAPD------AAYVHYCSNETIHGVEF--D---EVPDTGGVPLVADM 170 (355)
T ss_pred HHhcCCC---cEEEecccccC-CCCCCCHhhcCCCCC------CCEEEEeCCcccccEEc--c---eecccCCCeEEEEc
Confidence 3455776 99999875431 224 33333444433 45899999999999972 2 45566999999999
Q ss_pred ccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceec
Q 046506 82 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
+|++++.+.+... .|+...++||+++ |.|+|+++++++. +.+.-+..+.+.... ...+... .
T Consensus 171 ~qs~g~~~idv~~--------~~~~~ss~~K~lG-P~G~g~l~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~---~ 232 (355)
T cd00611 171 SSNILSRPIDVSK--------FGVIYAGAQKNLG-PAGVTVVIVRKDL-LGKARKITPSMLNYK-----THADNNS---L 232 (355)
T ss_pred cccccCCCCCHHH--------hCEEEeecccccC-CCceEEEEECHHH-HhhcccCCCCcccHH-----HHHhcCC---C
Confidence 9999999887532 3445566999875 9999999998764 333212222211100 0000000 0
Q ss_pred cCCC--cchHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHcCCCCeE-EecC--CCc-eEEEEEEcCCcchhhhhhh
Q 046506 162 LSRR--FRSLKLWFVLRNYGVA-NLRHFLRSHVNMAKLFERLVGSDKRFE-VVFP--RHF-AVVCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 162 ~~~~--~~~~~~~~~l~~~~~~-~~~~~~~~~~~~a~~l~~~L~~~~~~~-v~~~--~~~-~~v~~~~~~~~~~~~~~~~ 234 (310)
.+++ ...+++.++++.+..+ |++++.+++.++++++++.|+++||+. ...+ .+. .+++|.+.+.
T Consensus 233 ~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~--------- 303 (355)
T cd00611 233 YNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKE--------- 303 (355)
T ss_pred CCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCCh---------
Confidence 2233 2457888899988777 799999999999999999999998863 2111 134 4588887652
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
.+..++.+.+.+.|.+ .... ....+.+|+|+. ++||+|||++|+++|+++.
T Consensus 304 -------------~l~~~~~~~~~r~G~~-~~~~-~~~~g~vR~S~~-~~nt~edi~~l~~al~~~~ 354 (355)
T cd00611 304 -------------ELEKEFLKEAEAAGMI-GLKG-HRSVGGIRASIY-NALSLEGVQALADFMKEFQ 354 (355)
T ss_pred -------------hhhHHHHHHHHHCCCc-ccCC-CcccCeEEEEcc-CCCCHHHHHHHHHHHHHHh
Confidence 1223444566677864 3322 222468999976 6899999999999999853
No 60
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.84 E-value=5.2e-20 Score=168.42 Aligned_cols=188 Identities=12% Similarity=0.097 Sum_probs=137.9
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
..|+. ++.+|.+++ +.+|+++|+++++++ +.+|++++++|++|.+.|+++|+++|+++|++++||++|+
T Consensus 110 ~~G~~---v~~v~~~~~--~~~d~~~l~~~l~~~------~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~ 178 (353)
T TIGR03235 110 RNGFT---VTYLPVDES--GRIDVDELADAIRPD------TLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQV 178 (353)
T ss_pred hcCCE---EEEEccCCC--CcCCHHHHHHhCCCC------CEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhh
Confidence 34666 899998864 489999999999653 4589999999999999999999999999999999999999
Q ss_pred cccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCC
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSR 164 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 164 (310)
.+..+.+... .++|++++++|||+ +|.|+|+++++++... . ....|.+..... ...++.+.
T Consensus 179 ~g~~~~~~~~------~~~D~~~~s~~K~~-gp~g~g~l~~~~~~~~-~-~~~~~~~~~~~~----------~~~~~~gt 239 (353)
T TIGR03235 179 VGKITVDLSA------DRIDLISCSGHKIY-GPKGIGALVIRKRGKP-K-APLKPIMFGGGQ----------ERGLRPGT 239 (353)
T ss_pred cCCccccccc------cCCCEEEeehhhcC-CCCceEEEEEccCccc-c-cccCceeeCCCC----------cCccccCC
Confidence 8887765321 25999999999984 6999999999976321 1 111221111110 00122222
Q ss_pred C--cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC---ceEEEEEEcC
Q 046506 165 R--FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH---FAVVCFRVSP 224 (310)
Q Consensus 165 ~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~---~~~v~~~~~~ 224 (310)
+ ...+++.++++.+ .++.+++.+++.++++++++.|.+ +|++++.++. ..+++|.+.+
T Consensus 240 ~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~~~ 302 (353)
T TIGR03235 240 LPVHLIVGMGEAAEIA-RRNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSIDG 302 (353)
T ss_pred CChHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEeCC
Confidence 2 2345666677655 367889999999999999999988 7999886432 4577787654
No 61
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.84 E-value=2.9e-19 Score=165.74 Aligned_cols=184 Identities=16% Similarity=0.169 Sum_probs=132.2
Q ss_pred CcceecCCCCCCEEEEec--CCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEE
Q 046506 1 KAAQIVGIDVKNFRAIKT--TKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVH 78 (310)
Q Consensus 1 kaa~~~g~~~~~v~~v~~--~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~ 78 (310)
||+.++|+. .++|++ +++ .+.+|+++|+++|++.+. . .+.+++.+.++...|..+|+++|+++|++||+|+|
T Consensus 166 kAi~~~G~~---pv~Vd~~~d~~-~~~iD~e~Le~aIt~~~~-k-ai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lI 239 (444)
T TIGR03531 166 KAISTAGFE---PRVIETVLDGD-ELTTDVEDIERAIEEIGP-D-NILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHI 239 (444)
T ss_pred HHHHHcCCe---EEEeeeeecCc-CCCcCHHHHHHHHHhccC-C-CEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEE
Confidence 577889998 999995 443 689999999999986431 1 12233333333445689999999999999999999
Q ss_pred eecccccccccChhhhhhh-cC--CCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCC
Q 046506 79 VDAAYAGSACICPEFRHFI-DG--VEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDY 155 (310)
Q Consensus 79 vD~a~~~~~~~~~~~~~~~-~~--~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 155 (310)
||+||+.+.... .... .+ .+.+|++++++||++.+|.++|++++++++.++.... .|....
T Consensus 240 vDaAyg~~~~~~---~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~---~y~g~~---------- 303 (444)
T TIGR03531 240 VNNAYGLQSNKY---MELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISK---SYPGRA---------- 303 (444)
T ss_pred EECcCcCcChhh---hhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHH---hccCCC----------
Confidence 999998643221 1111 11 2248999999999999999989888888876533221 111100
Q ss_pred CCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCC---CCeEEecCCC
Q 046506 156 KDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSD---KRFEVVFPRH 214 (310)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~---~~~~v~~~~~ 214 (310)
.......+|+++..+|.+++++++++..++++++.+.|.++ .|.+++..|.
T Consensus 304 --------~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~ 357 (444)
T TIGR03531 304 --------SASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPE 357 (444)
T ss_pred --------CChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCC
Confidence 01245778899999999999999999999999999999875 3567774443
No 62
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.83 E-value=6e-20 Score=168.18 Aligned_cols=235 Identities=11% Similarity=-0.021 Sum_probs=156.8
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChh
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPE 92 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~ 92 (310)
+..+++++++ .++++ +.++ +.+|+++|++|.+|.+.|+++| +|++|++++||++++.++.+.+.
T Consensus 110 ~~~~~~~~~~--~~~~~-----~~~~------~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv 173 (361)
T TIGR01366 110 PIIVTADPGS--APEPQ-----ADPG------VDVIAWAHNETSTGVAVPVRRP---EGSDDALVVIDATSGAGGLPVDI 173 (361)
T ss_pred ceEEecCCCC--CCCCc-----cCCC------CCEEEEcccCCccceecccccc---cccCCCeEEEEcCccccCCCCCH
Confidence 7777777533 44432 2222 4589999999999999999998 58999999999999999988764
Q ss_pred hhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccC------CccccccccccccccCCCCceeccCCCc
Q 046506 93 FRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTN------PEYLKNKATESKQVVDYKDWQITLSRRF 166 (310)
Q Consensus 93 ~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~------~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (310)
. .+|++++++|||+++|.|.++++++++. +++..... |.|+... .......+++.+.
T Consensus 174 ~--------~~D~~~~s~~K~lg~~~Gl~~~~~s~~~-~~~~~~~~~~~~~~p~~~d~~--------~~~~~~~~~~t~~ 236 (361)
T TIGR01366 174 A--------ETDVYYFAPQKNFASDGGLWLAIMSPAA-LERIEAIAASGRWVPEFLSLP--------TAVDNSLKNQTYN 236 (361)
T ss_pred H--------HCCEEEEEchhhcCCCCceEEEEECHHH-HhhhhcccCCCCCCchhhhHH--------HHHhccccCCCCC
Confidence 2 2899999999999999888888877663 33322110 1121110 1111111222221
Q ss_pred -----chHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHcCCCCeEEecC-C--CceE-EEEEEcCCcchhhhhhhhc
Q 046506 167 -----RSLKLWFVLRNYGVA-NLRHFLRSHVNMAKLFERLVGSDKRFEVVFP-R--HFAV-VCFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 167 -----~~~~~~~~l~~~~~~-~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~--~~~~-v~~~~~~~~~~~~~~~~~~ 236 (310)
..+++.++++.+..+ +++.+.+++.++++++++.|.+.+.++++.. + ..+. .++.+.. +.
T Consensus 237 tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~-g~--------- 306 (361)
T TIGR01366 237 TPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVD-DI--------- 306 (361)
T ss_pred CchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCC-cc---------
Confidence 224667788877666 6999999999999999999999876776532 1 1222 2233322 11
Q ss_pred cccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 237 NSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
-..++.+.|.++|.....+...-+...+|+|++ .++|++||++++++|++++++
T Consensus 307 ------------~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~-~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 307 ------------DAATVAKILRANGIVDTEPYRKLGRNQLRVAMF-PAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred ------------CHHHHHHHHHHCCCeeccCccccCCCcEEEEcC-CCCCHHHHHHHHHHHHHHHhh
Confidence 114577777777654332221113468999977 479999999999999997764
No 63
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.83 E-value=1.6e-19 Score=170.29 Aligned_cols=244 Identities=12% Similarity=0.099 Sum_probs=155.9
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEe--eccc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHV--DAAY 83 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~v--D~a~ 83 (310)
.|+. ++.+|+++ . .+|+++|+++|+++ +.+|++++. |.+|.++|+++|+++||++|+|++| |..
T Consensus 178 ~G~~---~~~v~~~~--~-~~d~~~l~~~i~~~------t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~- 243 (447)
T PRK00451 178 QGIE---VVEVPYED--G-VTDLEALEAAVDDD------TAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPV- 243 (447)
T ss_pred CCcE---EEEecCCC--C-CCCHHHHHHhcCCC------eEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChH-
Confidence 5666 99999886 3 79999999999754 347777776 7899999999999999999999998 543
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccc-----cccccceEEEEEeCchhHHhhhccCCccccccccccccccCC---
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKW-----FFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDY--- 155 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~-----l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~--- 155 (310)
+.+.+..+ +..++|++++++||| +++| |+|+++++++ .+.. ++ +.+........+...+
T Consensus 244 ~~g~~~~~-------~~~~~D~~~~s~~k~~~~~~~~Gp-g~G~l~~~~~-~~~~-~~---~~~~g~~~~~~~~~~~~~~ 310 (447)
T PRK00451 244 SLGLLKPP-------GEYGADIVVGEGQPLGIPLSFGGP-YLGFFATRKK-LVRQ-MP---GRLVGETVDADGKRGFVLT 310 (447)
T ss_pred HhccCCCc-------ccCCCCEEEECCCcCCCCCCCCCC-CchHHHhhHH-HHhh-CC---CCEeeeecccCCCeeeEee
Confidence 23322211 112699999999997 5556 7999887654 3332 21 1111111000000000
Q ss_pred -----CCceeccCCC-c------chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEc
Q 046506 156 -----KDWQITLSRR-F------RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVS 223 (310)
Q Consensus 156 -----~~~~~~~~~~-~------~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~ 223 (310)
.......+.. . .+++.+.+++.++.++++++.++..++++++.++|.+++++++...+....+++.+.
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~v~~~ 390 (447)
T PRK00451 311 LQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDGPFFNEFVVRLP 390 (447)
T ss_pred ccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCCCeEEEEEEecC
Confidence 0000011111 0 113334456667889999999999999999999999998998873332333334432
Q ss_pred CCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEE---EEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 224 PSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAY---MTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
.. ..++.++|.++|.+. ..+....-...+|+|++ .++|++||++++++|+++
T Consensus 391 ~~------------------------~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~-~~~t~e~i~~l~~~L~~~ 445 (447)
T PRK00451 391 KP------------------------AEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVT-EKRTKEDIDALVAALGEV 445 (447)
T ss_pred CC------------------------HHHHHHHHHhcCCCCCcccccccCCcCCEEEEecC-CCCCHHHHHHHHHHHHHH
Confidence 11 146777777776541 11111111358999966 579999999999999876
Q ss_pred H
Q 046506 301 L 301 (310)
Q Consensus 301 ~ 301 (310)
+
T Consensus 446 ~ 446 (447)
T PRK00451 446 L 446 (447)
T ss_pred h
Confidence 4
No 64
>PLN02721 threonine aldolase
Probab=99.82 E-value=1.1e-18 Score=159.57 Aligned_cols=245 Identities=17% Similarity=0.136 Sum_probs=149.4
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcC-CCcEEEEEecc-CCcccccCC---hHHHHHHHHHhCcEEE
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAG-LIPLFLCATIG-TTAITAVDT---LKPLCDVAKQFGIWVH 78 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~-~~~~~v~~~~~-~~~~G~~~p---l~~I~~l~~~~g~~l~ 78 (310)
...|+. ++.+|.+++ +.+|+++++++|++....+ ..+.+|+++.. ++++|.+.| +++|+++|++||++++
T Consensus 101 ~~~g~~---~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~li 175 (353)
T PLN02721 101 TLGGVH---PRTVKNNED--GTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLH 175 (353)
T ss_pred hhcCce---eEecCCCcC--CCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEE
Confidence 445665 888888754 5899999999997431111 12456777564 456787766 7899999999999999
Q ss_pred eecccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCc
Q 046506 79 VDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDW 158 (310)
Q Consensus 79 vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 158 (310)
+|+||..+........ ......++|++++++|||+++|.| ++++.+++.+....... .+..
T Consensus 176 vD~a~~~~~~~~~~~~-~~~~~~~~d~~~~s~sK~l~~~~G--~~~~~~~~~~~~~~~~~-~~~~--------------- 236 (353)
T PLN02721 176 IDGARIFNASVALGVP-VHRLVKAADSVSVCLSKGLGAPVG--SVIVGSKSFIRKAKRLR-KTLG--------------- 236 (353)
T ss_pred EEchhhhcchhhhCCC-HHHHhhhCCEEEEecccccCCcee--eEEecCHHHHHhHHHHH-HhcC---------------
Confidence 9999854321111111 011123589999999999998754 34445565443221110 0000
Q ss_pred eeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEE-ecCCCceEEEEEEcCCcchhhhhhhhcc
Q 046506 159 QITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEV-VFPRHFAVVCFRVSPSAVMDKLKTKYEN 237 (310)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v-~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 237 (310)
++.+.......+++..+ +...+.+++..++++++.+.|.+++++++ +.++..+++.+++....
T Consensus 237 ---~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 300 (353)
T PLN02721 237 ---GGMRQVGVLAAAALVAL--QENVPKLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGS----------- 300 (353)
T ss_pred ---CCeehhHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCc-----------
Confidence 00000111111122112 22223345556788899999998888866 55667777777765310
Q ss_pred ccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 238 SLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
......+.++|.+.|.... +. +..++|++++ ++++++|+++++++|++++.
T Consensus 301 ---------~~~~~~~~~~L~~~gi~v~-~~---~~~~lR~~~~-~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 301 ---------RITAEKLCKSLEEHGVLLM-PG---NSSRIRVVTH-HQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred ---------cccHHHHHHHHHhCCcEEe-cC---CCceEEEEec-CcCCHHHHHHHHHHHHHHhh
Confidence 0012467788877775433 32 4568999965 67999999999999998754
No 65
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.81 E-value=4.7e-18 Score=157.66 Aligned_cols=232 Identities=15% Similarity=0.070 Sum_probs=151.0
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhh--hcCC-C
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGV-E 101 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~--~~~~-~ 101 (310)
.+|+++|+++|++.......+.+|+..+..|++|.+.|+++|+++|++||+++++|++|+.+...... .+. ..++ .
T Consensus 151 ~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~-~~~~~~~~~~~ 229 (393)
T TIGR01822 151 NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTG-RGSHELCGVMG 229 (393)
T ss_pred CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCC-CchHHhcCCCC
Confidence 47999999999875333224668888888899999999999999999999999999999765542211 000 1111 2
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCc-chHHHHHHHHHhCH
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRF-RSLKLWFVLRNYGV 180 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~ 180 (310)
++|+++.++||+++++. .|+++. ++............+.. .++... ...++.++++.+
T Consensus 230 ~~di~~~s~sK~l~g~r-~G~~~~-~~~~~~~l~~~~~~~~~-----------------~~~~~~~~~~a~~~al~~~-- 288 (393)
T TIGR01822 230 RVDIITGTLGKALGGAS-GGFTTA-RKEVVELLRQRSRPYLF-----------------SNSLPPAVVGASIKVLEML-- 288 (393)
T ss_pred CCeEEEEEChHHhhCCC-cEEEEe-CHHHHHHHHHhCcccee-----------------cCCCCHHHHHHHHHHHHHH--
Confidence 58999999999988764 476654 44443322111112211 111111 122334444433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhc
Q 046506 181 ANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINAS 260 (310)
Q Consensus 181 ~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 260 (310)
+..+++.++..++.+++.+.|.+. ++.+. ++..+++.+.+.+ .....++.+.|.++
T Consensus 289 ~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~i~~~~----------------------~~~~~~l~~~L~~~ 344 (393)
T TIGR01822 289 EASNELRDRLWANTRYFRERMEAA-GFDIK-PADHPIIPVMLYD----------------------AVLAQRFARRLLEE 344 (393)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCC----------------------HHHHHHHHHHHHHC
Confidence 235677888899999999999875 77764 3345556555433 11235677778778
Q ss_pred CcEEEEEeEE----CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 261 GKAYMTHAVL----GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 261 g~~~~~~~~~----~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
|. ++.+..+ .+...+|+|++ ++++++||++++++|+++.+.+
T Consensus 345 gI-~v~~~~~~~~~~~~~~iRis~~-~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 345 GI-YVTGFFYPVVPKGQARIRVQIS-AAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred Ce-eEeeeCCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 74 4443221 24467999966 6799999999999999987653
No 66
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.81 E-value=2e-18 Score=151.83 Aligned_cols=232 Identities=16% Similarity=0.108 Sum_probs=169.9
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhh--hcC-CC
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDG-VE 101 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~--~~~-~~ 101 (310)
+-|+++|+++|.+... ..|.+|.+..+.+|.|.+.||+||++++|+||+..++|..|++|.+.. ...+. -++ +.
T Consensus 286 HND~~hL~~lL~~~~~--svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~-rGaGvgerdGvm~ 362 (570)
T KOG1360|consen 286 HNDLDHLEQLLQSSPK--SVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGP-RGAGVGERDGVMH 362 (570)
T ss_pred cCCHHHHHHHHHhCCC--CCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccC-CCCCccccCCcch
Confidence 4589999999987533 358899999999999999999999999999999999999998876533 11111 022 34
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcc-hHHHHHHHHHhCH
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFR-SLKLWFVLRNYGV 180 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~ 180 (310)
.+|+++.+..|.|+.- |..+.....+++..-+..+.|++..+- +.. ..++..+.+.+..
T Consensus 363 kvDiIsGTLgKafGcV---GGYIAat~~LvDmiRSyAaGFIFTTSL-----------------PP~vl~GAleaVr~lk~ 422 (570)
T KOG1360|consen 363 KVDIISGTLGKAFGCV---GGYIAATRKLVDMIRSYAAGFIFTTSL-----------------PPMVLAGALEAVRILKS 422 (570)
T ss_pred hhhhcccchhhhcccc---cceehhhhhHHHHHHHhcCceEEecCC-----------------ChHHHHhHHHHHHHHhh
Confidence 5899999999998754 333333343433333556677765532 211 2334455555544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhc
Q 046506 181 ANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINAS 260 (310)
Q Consensus 181 ~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 260 (310)
+.-...+++.+++.+++++.|.++ |+.++ +..+.|+.+++.. ..++..+.+.|..+
T Consensus 423 ~eg~~lR~~hqrnv~~~kq~l~~~-GiPVi-~~pSHIiPv~vgd----------------------a~l~~~~sd~Li~~ 478 (570)
T KOG1360|consen 423 EEGRVLRRQHQRNVKYVKQLLMEL-GIPVI-PNPSHIIPVRVGD----------------------AALAKQASDILISK 478 (570)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCcceeeeeccC----------------------HHHHHHHHHHHHHh
Confidence 434456667788999999999987 99987 4456788887776 34566788888888
Q ss_pred CcEEEE----EeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 261 GKAYMT----HAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 261 g~~~~~----~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.++|+. |++..|...+|+..+ |+.|++.++.|++++...-+++
T Consensus 479 h~iYvQaINyPTV~rG~E~LRiaPT-P~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 479 HNIYVQAINYPTVARGTERLRIAPT-PHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred cCeEEEeccCCcccccceeeecCCC-CCCCHHHHHHHHHHHHHHHHHc
Confidence 888776 566689999999955 8899999999999998877664
No 67
>PRK07179 hypothetical protein; Provisional
Probab=99.80 E-value=3.6e-18 Score=159.21 Aligned_cols=225 Identities=10% Similarity=0.044 Sum_probs=147.8
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhh--cCC-C
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI--DGV-E 101 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~--~~~-~ 101 (310)
..|+++|+++|++.+ +.+|++.+.+|++|.+.|+++|+++|++||+++++|++|+.+..... ..+.. .++ .
T Consensus 167 ~~d~~~l~~~l~~~~-----~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~-g~g~~~~~~~~~ 240 (407)
T PRK07179 167 HNDVDHLRRQIERHG-----PGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQ-GAGLVAELGLTS 240 (407)
T ss_pred CCCHHHHHHHHHhcC-----CeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCC-CCchHHhcCCCC
Confidence 468999999997531 45788888999999999999999999999999999999976543211 11111 111 2
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhhc-cCCccccccccccccccCCCCceeccCCC-cchHHHHHHHHHhC
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLS-TNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWFVLRNYG 179 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~-~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~ 179 (310)
.+|+++.|+||+++.+ +|+++.+ +... +.+. ...++... ++.. ..++++.++++.+
T Consensus 241 ~vdi~~~S~sK~~g~~--~G~l~~~-~~~~-~~~~~~~~~~~~~-----------------~t~~~~~~aa~~aal~~~- 298 (407)
T PRK07179 241 RVHFITASLAKAFAGR--AGIITCP-RELA-EYVPFVSYPAIFS-----------------STLLPHEIAGLEATLEVI- 298 (407)
T ss_pred CCCEEEeechHhhhcc--CeEEEeC-HHHH-HHHHHhCcCeeeC-----------------CCCCHHHHHHHHHHHHHH-
Confidence 4799999999999753 6777665 3332 2221 11111111 1101 1223334445443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh
Q 046506 180 VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA 259 (310)
Q Consensus 180 ~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 259 (310)
...+++.++..++.+++++.|.++ ++++. ...+++.+.+... .....+.+.|.+
T Consensus 299 -~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~--~~~~i~~l~~~~~----------------------~~~~~~~~~L~~ 352 (407)
T PRK07179 299 -ESADDRRARLHANARFLREGLSEL-GYNIR--SESQIIALETGSE----------------------RNTEVLRDALEE 352 (407)
T ss_pred -hcCHHHHHHHHHHHHHHHHHHHHc-CCCCC--CCCCEEEEEeCCH----------------------HHHHHHHHHHHH
Confidence 223567788999999999999987 77765 2356676665321 112456677777
Q ss_pred cCcE---EEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 260 SGKA---YMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 260 ~g~~---~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+|.+ ++.+....+...+|||++ ..+|++||++++++|+++..+.
T Consensus 353 ~GI~~~~~~~p~~~~~~~~lRis~~-~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 353 RNVFGAVFCAPATPKNRNLIRLSLN-ADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred CCceEeeecCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHhh
Confidence 7754 222322334679999976 5799999999999999987664
No 68
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.80 E-value=6.1e-18 Score=159.41 Aligned_cols=247 Identities=11% Similarity=0.049 Sum_probs=157.3
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhh
Q 046506 17 KTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF 96 (310)
Q Consensus 17 ~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~ 96 (310)
+.+++ ++.+|+++|++++.+.. |.+|++. .+.+|...|+++|+++|+++|++++||+||+.|.+..+....
T Consensus 162 ~~~~~-~g~iD~d~Le~~l~~~~-----pklIv~~--~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~- 232 (475)
T PLN03226 162 RLDES-TGLIDYDKLEKKAMLFR-----PKLIIAG--ASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAAS- 232 (475)
T ss_pred eecCC-CCCcCHHHHHHHHhhcC-----CeEEEEe--cCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCC-
Confidence 34442 45899999999997532 4444442 344678889999999999999999999999998876654321
Q ss_pred hcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCC-CCceeccCCC-cchHHHHHH
Q 046506 97 IDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDY-KDWQITLSRR-FRSLKLWFV 174 (310)
Q Consensus 97 ~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~ 174 (310)
.+.++|++++++||||++|.| |++++++. ...........+.. +....+. ....++++-. ..++++.++
T Consensus 233 --p~~~~Div~~t~hK~L~GP~G-g~I~~~~~-~~~~~~~g~~~~~d-----~~~~i~~a~~~~~~g~p~~~~iaal~aA 303 (475)
T PLN03226 233 --PFEYCDVVTTTTHKSLRGPRG-GMIFFRKG-PKPPKGQGEGAVYD-----YEDKINFAVFPGLQGGPHNHTIAALAVA 303 (475)
T ss_pred --CCCCCeEEEecCcccccCCCc-eEEEEchh-hcccccCCCccHHH-----HHHHhccccCCccCCCchHHHHHHHHHH
Confidence 123699999999999999998 77777644 22110000000000 0000000 1112344422 234666777
Q ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC-CCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHH
Q 046506 175 LRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP-RHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNREL 253 (310)
Q Consensus 175 l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 253 (310)
++.+...+++++.++..+++++|++.|.+ .|++++.+ ...+++.+.+.+..+. ..++
T Consensus 304 l~~i~~~~~~~~~~~~~~na~~L~~~L~~-~G~~l~~~~t~~hi~lv~~~~~gi~---------------------~~~~ 361 (475)
T PLN03226 304 LKQAMTPEFKAYQKQVKANAAALANRLMS-KGYKLVTGGTDNHLVLWDLRPLGLT---------------------GSRV 361 (475)
T ss_pred HHHHhCcCHHHHHHHHHHHHHHHHHHHHh-CCCEEEcCCCCCCEEEEEccCCCCC---------------------HHHH
Confidence 88776677888999999999999999998 59999864 3456666666543211 0234
Q ss_pred HHHHHhcCcEEEEEeE-----ECCEeEEEEE---ccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 254 LESINASGKAYMTHAV-----LGGIYAIRFA---AGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 254 ~~~l~~~g~~~~~~~~-----~~~~~~iRis---~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
.+.|.+.|+..-.... .-....+|+. +++...+++|++.+.+.|.+++..
T Consensus 362 ~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 362 EKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred HHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 4555555543211110 0123457871 245678999999999999988863
No 69
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.79 E-value=1.8e-17 Score=152.62 Aligned_cols=226 Identities=12% Similarity=0.048 Sum_probs=142.3
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhh--cCCCC
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI--DGVEG 102 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~--~~~~~ 102 (310)
..|+++|+++|++.........+|++.+.++++|.+.|+++|+++|+++|+++|||+||+.|.+..+. .+.. .+..+
T Consensus 124 ~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g-~g~~~~~~~~~ 202 (370)
T PRK05937 124 HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDG-KGFCHSLGYEN 202 (370)
T ss_pred CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCC-CchHHhhCCCC
Confidence 57899999999864321112346777899999999999999999999999999999999877654432 1110 11223
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC-cchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~ 181 (310)
.+.+..+++|+++ |.|+|+++.++ .........+++.+. .+.+ +..+++.++++.+...
T Consensus 203 ~~~~~~tlsK~~g-~~G~~vl~~~~--~~~~~~~~~~~~~~s-----------------~~~~~~~~~a~~aal~~l~~~ 262 (370)
T PRK05937 203 FYAVLVTYSKALG-SMGAALLSSSE--VKQDLMLNSPPLRYS-----------------TGLPPHLLISIQVAYDFLSQE 262 (370)
T ss_pred CcEEEEechhhhh-cCceEEEcCHH--HHHHHHHhCCCCeec-----------------CCCCHHHHHHHHHHHHHHHhC
Confidence 3456788889875 67888776432 211211111223221 1111 2334455666655333
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcC
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASG 261 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 261 (310)
+ +...+++.++.+++.+.|.... + ..+..+.+... ..+.+.+.|.++|
T Consensus 263 ~-~~~~~~l~~l~~~l~~~l~~~~-------~-~~~~~i~~~~~-----------------------~~~~~~~~L~~~g 310 (370)
T PRK05937 263 G-ELARKQLFRLKEYFAQKFSSAA-------P-GCVQPIFLPGI-----------------------SEQELYSKLVETG 310 (370)
T ss_pred c-HHHHHHHHHHHHHHHHhcCCCC-------C-CCEEEEEeCCh-----------------------hHHHHHHHHHHCC
Confidence 3 4566788888899988886421 0 11222333321 1245667777777
Q ss_pred cEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 262 KAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 262 ~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
. ++....+...+.+|+|++ +++|+|||++++++|+++..++.
T Consensus 311 i-~v~~~~~~~~~~iRis~~-~~~t~edid~l~~~L~~~~~~~~ 352 (370)
T PRK05937 311 I-RVGVVCFPTGPFLRVNLH-AFNTEDEVDILVSVLATYLEKYQ 352 (370)
T ss_pred e-eEEeeCCCCCCEEEEEcC-CCCCHHHHHHHHHHHHHHHHHhC
Confidence 4 444322233568999966 68999999999999999887753
No 70
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.79 E-value=1e-17 Score=156.25 Aligned_cols=235 Identities=9% Similarity=0.069 Sum_probs=148.1
Q ss_pred EEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhh
Q 046506 15 AIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFR 94 (310)
Q Consensus 15 ~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~ 94 (310)
..+.++. .+.+|+++|++++.+. .+.+|+++. +..|...|+++|.++|++||++++||+||+.|........
T Consensus 145 ~~~~~~~-~~~~d~~~le~~l~~~-----~~klVi~~~--~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~ 216 (416)
T PRK13034 145 QYGVDRL-TGLIDYDEVEELAKEH-----KPKLIIAGF--SAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHP 216 (416)
T ss_pred Ecccccc-cCCcCHHHHHHHHhhc-----CCeEEEECC--CccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCC
Confidence 3444443 3469999999998653 144555433 3467788999999999999999999999988876543211
Q ss_pred hhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCc-chHHHHH
Q 046506 95 HFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRF-RSLKLWF 173 (310)
Q Consensus 95 ~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 173 (310)
..+.++|++++++|||+++|.| |+++.+++.. ...... +++.. ++.+..+ ..+++..
T Consensus 217 ---~~~~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~-~~~~~~---~~~~~--------------~~~~~~~~~~aa~~~ 274 (416)
T PRK13034 217 ---NPFPHAHVVTTTTHKTLRGPRG-GMILTNDEEI-AKKINS---AVFPG--------------LQGGPLMHVIAAKAV 274 (416)
T ss_pred ---CCCCCceEEEEeCcccCCCCCC-eEEEECcHHH-HHHHHh---hcCCc--------------ccCCccHHHHHHHHH
Confidence 1234599999999999988876 5555554432 222110 11111 0111111 1222222
Q ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC-CCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHH
Q 046506 174 VLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP-RHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRE 252 (310)
Q Consensus 174 ~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (310)
++...-..+..++.++.++++++|++.|.+. |+++..+ .+++++.+.+..... -...
T Consensus 275 al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~~~~~t~i~~v~~~~~~~---------------------~~~~ 332 (416)
T PRK13034 275 AFGEALQPEFKTYAKQVIANAQALAEVLKER-GYDLVSGGTDNHLLLVDLRPKGL---------------------SGKD 332 (416)
T ss_pred HHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCCCCCcEEEEEcCCCCC---------------------CHHH
Confidence 3322222344567899999999999999987 9998743 567777776654321 0134
Q ss_pred HHHHHHhcCcEEEEEe-------EECCEeEEEEEccCC----CCCHHHHHHHHHHHHHHHHH
Q 046506 253 LLESINASGKAYMTHA-------VLGGIYAIRFAAGAT----LTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 253 l~~~l~~~g~~~~~~~-------~~~~~~~iRis~~~~----~~t~edi~~li~~l~~~~~~ 303 (310)
+.+.|.+.|. ++... .+.....+|++++ . ..+++||++++++|++++..
T Consensus 333 ~~~~L~~~GI-~v~~~~~p~~~~~p~~~~~lR~~~~-~~t~~~~~~~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 333 AEQALERAGI-TVNKNTVPGDTESPFVTSGIRIGTP-AGTTRGFGEAEFREIANWILDVLDD 392 (416)
T ss_pred HHHHHHhCCc-EEeccCCCCCCcCCCCCCeeEeCcH-HHHhCCCCHHHHHHHHHHHHHHHhc
Confidence 5566777774 44321 1112567999944 5 56699999999999987753
No 71
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.79 E-value=2e-18 Score=156.72 Aligned_cols=241 Identities=17% Similarity=0.109 Sum_probs=145.5
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHc-CCCcEEEEEeccCCcccc---cCChHHHHHHHHHhCcEEEee
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEA-GLIPLFLCATIGTTAITA---VDTLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~-~~~~~~v~~~~~~~~~G~---~~pl~~I~~l~~~~g~~l~vD 80 (310)
+.|+. ++.+|.+. +.+|+++|++++++.... ...+.+|++.+.+|. |. .+++++|+++|++||++++||
T Consensus 93 ~~g~~---~~~v~~~~---~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~~~~livD 165 (338)
T cd06502 93 LSGVK---LLPVPGEN---GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKENGLPLHLD 165 (338)
T ss_pred HcCce---EEeecCCC---CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHHcCCeEeec
Confidence 45665 88888753 479999999999752110 012457777777775 54 466788999999999999999
Q ss_pred cccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
+||..+....... .......++|+++.++|||++.|.| .+++.+++.++........+.
T Consensus 166 ea~~~~~~~~~~~-~~~~~~~~~d~~~~s~sK~~~~~~g--~~~~~~~~~~~~~~~~~~~~~------------------ 224 (338)
T cd06502 166 GARLANAAAALGV-ALKTYKSGVDSVSFCLSKGGGAPVG--AVVVGNRDFIARARRRRKQAG------------------ 224 (338)
T ss_pred hHHHHHHHHhcCC-CHHHHHhcCCEEEEeccccCCCccc--eEEECCHHHHHHHHHHHHHhC------------------
Confidence 9985432111100 0000012589999999999998853 344455544433211111110
Q ss_pred ccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccc
Q 046506 161 TLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLL 240 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
++.+...+..++++..+...++.++.++..++++++.+.|+++ ++.+. ++..+++.+.+....
T Consensus 225 -~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~v~~~~~~-------------- 287 (338)
T cd06502 225 -GGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEEL-GGLES-EVQTNIVLLDPVEAN-------------- 287 (338)
T ss_pred -CChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CCCcc-cccCCeEEEecCCcc--------------
Confidence 0001122233344444444456778889999999999999987 55443 566788877765321
Q ss_pred hhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHH
Q 046506 241 SEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQE 299 (310)
Q Consensus 241 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~ 299 (310)
.....+.+++.+. .+.|. ++.+. +...+|++++ ++++++|++++++++++
T Consensus 288 ---~~~~~l~~~l~~~-~~~gi-~~~~~---~~~~lRi~~~-~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 288 ---AVFVELSKEAIER-RGEGV-LFYAW---GEGGVRFVTH-WDTTEEDVDELLSALKA 337 (338)
T ss_pred ---HHHHHHHHHHHHh-hhCCE-EEEec---CCCeEEEEee-cCCCHHHHHHHHHHHhc
Confidence 0111222222222 24553 33322 1278999955 78999999999999865
No 72
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.79 E-value=8.4e-18 Score=154.20 Aligned_cols=228 Identities=13% Similarity=0.046 Sum_probs=142.4
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChh
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPE 92 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~ 92 (310)
+++++.+ +.+|+++++++|+++++ .++.+++.++.+|.+.|+++|+++||+||+++++|+||+.. ...
T Consensus 127 ~v~v~~~----~~~d~~~le~ai~~~t~-----ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~---~~~ 194 (363)
T TIGR01437 127 VVEAGYA----NECSAEQLEAAITEKTA-----AILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEED---LQK 194 (363)
T ss_pred EEEEcCC----CCCCHHHHHHhcChhce-----EEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCc---hHH
Confidence 6777664 26999999999988753 23334555678899999999999999999999999999621 111
Q ss_pred hhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHH
Q 046506 93 FRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLW 172 (310)
Q Consensus 93 ~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (310)
. ... ++|++++|+||++++|. .|+++. ++..+..... +...... .++.+. ...+++.
T Consensus 195 ~----~~~-g~D~~~~S~~K~l~gp~-~G~l~~-~~~~i~~~~~----~~~~~~~-----------~~~~~~-~~~~gl~ 251 (363)
T TIGR01437 195 Y----YRL-GADLVIYSGAKAIEGPT-SGLVLG-KKKYIEWVKL----QSKGIGR-----------AMKVGK-ENILGLT 251 (363)
T ss_pred H----HHc-CCCEEEEeCCcccCCCc-eEEEEE-cHHHHHHHHh----ccCCCcc-----------eeccCH-HHHHHHH
Confidence 0 111 48999999999999997 677664 4434432211 1111000 001110 1235666
Q ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC-------ceEEEEEEcCCcchhhhhhhhccccchhHHH
Q 046506 173 FVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH-------FAVVCFRVSPSAVMDKLKTKYENSLLSEEER 245 (310)
Q Consensus 173 ~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (310)
+++..+...+.+... +..+.++++++.|.++||+++..++. ...+.|.....+.
T Consensus 252 aAl~~~~~~~~~~~~-~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~~g~------------------ 312 (363)
T TIGR01437 252 AALEQYLSTGKESGA-EMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESELGM------------------ 312 (363)
T ss_pred HHHHHHHccCcccHH-HHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccCCCC------------------
Confidence 666655332333333 33345678999999999998874321 1334444421111
Q ss_pred HHHHHHHHHHHHHhcCc-EEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 246 INEFNRELLESINASGK-AYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 246 ~~~~~~~l~~~l~~~g~-~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
-..++.+.|.+.+. ++..+ .....+.+|+++. .++++|++.++++|+++
T Consensus 313 ---~~~~l~~~L~~~~~~I~~r~-~~~~~~~~~l~~~--~~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 313 ---TAADVVQALRQGEPAIYTRG-YKANEGIIEIDPR--SVTGGQLDIIVERIREI 362 (363)
T ss_pred ---CHHHHHHHHhcCCCCEEEee-eeecCCeEEEEee--cCCHHHHHHHHHHHHHh
Confidence 01467777766553 34432 2345668898855 36799999999999875
No 73
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.78 E-value=1.2e-17 Score=142.84 Aligned_cols=258 Identities=10% Similarity=0.050 Sum_probs=180.2
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC-hHHHHHHHHHhCcEEEeec
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT-LKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p-l~~I~~l~~~~g~~l~vD~ 81 (310)
++-+|.+ |.+|+.++++ .+..+.++++|..++ |.+++++|+.|.+|..+| ++.+.++||+|+++++||+
T Consensus 111 ~~r~ga~---V~~v~~~~G~--~~~le~i~~~lsqh~-----p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~ 180 (385)
T KOG2862|consen 111 ARRYGAE---VDVVEADIGQ--AVPLEEITEKLSQHK-----PKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDT 180 (385)
T ss_pred HHhhCce---eeEEecCccc--CccHHHHHHHHHhcC-----CceEEEEecCccccccchHHHHHHHHhhcCCeEEEEec
Confidence 3446666 9999999865 799999999998864 779999999999999999 7778899999999999999
Q ss_pred ccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchh--HHhhhccCCccccccccccccccCCCCce
Q 046506 82 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSD--LVNSLSTNPEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~--~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 159 (310)
..+.+..++..... ++|+......|.+++|.|.+.+...++.. +++..+....|.+..- .....|.. .
T Consensus 181 VaSlggt~F~mDew------gVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~-~~~~~wgc---~ 250 (385)
T KOG2862|consen 181 VASLGGTEFEMDEW------GVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYFDIL-RLGNFWGC---D 250 (385)
T ss_pred hhhcCCccceehhh------cccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEEeHH-hhcchhcc---C
Confidence 98888776643221 59999999999999999999988776643 1111111111111110 00000000 0
Q ss_pred eccCCCc-------chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC---CCceEEEEEEcCCcchh
Q 046506 160 ITLSRRF-------RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP---RHFAVVCFRVSPSAVMD 229 (310)
Q Consensus 160 ~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~---~~~~~v~~~~~~~~~~~ 229 (310)
.+. |.+ ...++-++|..+.++|+++.++++.+++++++..|.++ |++.... .+.+.++-.-.|..+
T Consensus 251 ~e~-~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~-GLq~fv~~e~~rlptvttv~vp~gv-- 326 (385)
T KOG2862|consen 251 GEP-RAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEAL-GLQLFVVDEELRLPTVTTVKVPYGV-- 326 (385)
T ss_pred Ccc-cccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CccceecChhhccCcceeeecCCCC--
Confidence 000 221 23567788888889999999999999999999999987 7776542 233333322223211
Q ss_pred hhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeE-ECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 230 KLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAV-LGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
| -.++...+..++.+.+.+.. .-...++||-+...+.+.|.|+..++.|+..+.+
T Consensus 327 ------------D-------w~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 327 ------------D-------WKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred ------------C-------HHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 1 13566777777766665432 1246799999998889999999999888876654
No 74
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.78 E-value=1.3e-17 Score=152.41 Aligned_cols=247 Identities=13% Similarity=0.131 Sum_probs=149.3
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+...|+. +++++++++ ++.+|+++|++++++. +.+|++++ ++|.+.|+++|.++|+++|+++++|++
T Consensus 75 ~~~~g~~---~~~~~~~~~-~~~~d~~~l~~~i~~~------~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a 141 (352)
T cd00616 75 ILLLGAT---PVFVDIDPD-TYNIDPELIEAAITPR------TKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAA 141 (352)
T ss_pred HHHcCCe---EEEEecCCC-cCCcCHHHHHHhcCcC------CeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECC
Confidence 3445676 899999863 4689999999998643 33565543 579999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeee--cccccccccceEEEEEeCchhHHhhhcc-CCccccccccccccccCCCCce
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLN--AHKWFFTTLDCCCLWVKDPSDLVNSLST-NPEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~--~hK~l~~p~g~g~l~v~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~ 159 (310)
|+.+....... ... ..|+.++| .|||++++. .|+++.+++....+.... ...+.... ..+....
T Consensus 142 ~~~g~~~~~~~---~~~--~~d~~~~S~~~~K~~~~~~-gg~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 208 (352)
T cd00616 142 QALGATYKGRK---VGT--FGDAGAFSFHPTKNLTTGE-GGAVVTNDEELAERARLLRNHGRDRDR-------FKYEHEI 208 (352)
T ss_pred CCCCCeECCEE---ccc--CcceeEEcCCCCCCCcccC-ceEEEECCHHHHHHHHHHHHcCCCCCC-------Cccccce
Confidence 98776533210 111 14555555 559995443 355555555443322110 00000000 0000001
Q ss_pred eccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC-----ceEEEEEEcCCcchhhhhhh
Q 046506 160 ITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH-----FAVVCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~-----~~~v~~~~~~~~~~~~~~~~ 234 (310)
.....+...+. +++.....++++++.++..++++++++.|.++++++++.++. ..+++|.+.+..
T Consensus 209 ~~~~~~~~~~~--aa~~~~~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------- 278 (352)
T cd00616 209 LGYNYRLSEIQ--AAIGLAQLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEA-------- 278 (352)
T ss_pred eeeccCcCHHH--HHHHHHHHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcC--------
Confidence 11111112222 222223346778888999999999999999999999875432 356777775310
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhcCcEE---EEEeEEC--------------------CEeEEEEEccCCCCCHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESINASGKAY---MTHAVLG--------------------GIYAIRFAAGATLTEERHVM 291 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~~~--------------------~~~~iRis~~~~~~t~edi~ 291 (310)
.....++.+.|.++|... +.+.... ....+|++++ +++|++||+
T Consensus 279 ------------~~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~-~~~t~~di~ 345 (352)
T cd00616 279 ------------GESRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLH-PSLTEEEID 345 (352)
T ss_pred ------------CCCHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCC-CCCCHHHHH
Confidence 000145677777776522 1121110 0268999955 789999999
Q ss_pred HHHHHHH
Q 046506 292 VAWTVVQ 298 (310)
Q Consensus 292 ~li~~l~ 298 (310)
+++++|+
T Consensus 346 ~i~~~l~ 352 (352)
T cd00616 346 RVIEALR 352 (352)
T ss_pred HHHHHhC
Confidence 9999874
No 75
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.78 E-value=4e-18 Score=144.86 Aligned_cols=242 Identities=16% Similarity=0.177 Sum_probs=162.1
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHc-CC-CcEEEEEeccCCccc-ccCChH---HHHHHHHHhCcE
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEA-GL-IPLFLCATIGTTAIT-AVDTLK---PLCDVAKQFGIW 76 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~-~~-~~~~v~~~~~~~~~G-~~~pl~---~I~~l~~~~g~~ 76 (310)
+++.|+. ++.|...+++ .|+++++|++|+..... +. .+.+||+..-.+..| .+.||+ +|.++|++||+.
T Consensus 116 s~l~gv~---~~tv~~e~dg--tm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glk 190 (384)
T KOG1368|consen 116 SQLAGVH---VRTVKNENDG--TMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLK 190 (384)
T ss_pred hhhccce---eEeeeeCCCC--eeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCe
Confidence 4556665 8888888754 89999999999854421 22 335777765555555 777765 577899999999
Q ss_pred EEeecccccccc---cChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCcccccccccccccc
Q 046506 77 VHVDAAYAGSAC---ICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVV 153 (310)
Q Consensus 77 l~vD~a~~~~~~---~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~ 153 (310)
||.|||.-..+. ..+-.+ . ...+|+++++..|.+++|.|+ ++|.++..+.++- ++..
T Consensus 191 LH~DGARi~NAavasgV~vk~-i---~~~fDSVsiCLSKglgAPVGS--ViVG~k~FI~kA~-----~~RK--------- 250 (384)
T KOG1368|consen 191 LHMDGARIFNAAVASGVPVKK-I---CSAFDSVSICLSKGLGAPVGS--VIVGSKDFIDKAR-----HFRK--------- 250 (384)
T ss_pred eecchhhhhhHHHHcCCCHHH-H---HHhhhhhhhhhhccCCCCccc--EEEccHHHHHHHH-----HHHH---------
Confidence 999999743322 122111 1 135999999999999999866 6667776655442 1111
Q ss_pred CCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC-CCceEEEEEEcCCcchhhhh
Q 046506 154 DYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP-RHFAVVCFRVSPSAVMDKLK 232 (310)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~~~~v~~~~~~~~~~~~~~ 232 (310)
.+.+|.|. .++.++...+..+.-...+++.++.++.+++.+...+++++-.+ .++|++.+.+..+.+
T Consensus 251 -----alGGGmRQ--sGvLaaaaLval~~~~~~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~~----- 318 (384)
T KOG1368|consen 251 -----ALGGGMRQ--SGVLAAAALVALDENVPLLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQARL----- 318 (384)
T ss_pred -----HhcCchhH--HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhccccceeeecchhhcceeeeecccccC-----
Confidence 22334332 22222222333333334778888999999999998877988655 578888877655421
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHH-HHHH
Q 046506 233 TKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQ-EHLE 302 (310)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~-~~~~ 302 (310)
-.+++.+.+.++|...+.. ...++|++++ ++.|+++++.++.+++ .+..
T Consensus 319 ----------------~~~~l~~~~~k~gi~lm~~----~s~r~Rivlh-~Qvt~~~ve~~~~~~~k~~~~ 368 (384)
T KOG1368|consen 319 ----------------TAEELCKFLEKNGILLMGG----ASRRIRIVLH-HQVTDEDVEYVKSVLSKKFLK 368 (384)
T ss_pred ----------------CHHHHHHHHHHCCeEEeec----cccceEEEEE-EecCHHHHHHHHHHHHHHHHh
Confidence 1257788888888655543 2456999966 6899999999999994 4443
No 76
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.77 E-value=8.4e-17 Score=146.71 Aligned_cols=227 Identities=11% Similarity=-0.019 Sum_probs=143.9
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChh-h-hhhhcCCCCC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPE-F-RHFIDGVEGA 103 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~-~-~~~~~~~~~~ 103 (310)
+|+++++++|++.. ....+.++++.+.+|.+|...|+++|+++|+++|+++++|++|+.+...... . ........+.
T Consensus 115 ~~~~~le~~i~~~~-~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~ 193 (349)
T cd06454 115 NDMEDLEKLLREAR-RPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDV 193 (349)
T ss_pred CCHHHHHHHHHHhh-ccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccC
Confidence 57889999998643 1123567888888899999999999999999999999999999765442110 0 0000112358
Q ss_pred CeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC-cchHHHHHHHHHhCHHH
Q 046506 104 DSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 104 D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~ 182 (310)
|+++.++||+++.+ | |+++ .++..+.........+.. .++.. ...+++.++++.+..
T Consensus 194 ~i~~~s~sK~~~~~-g-G~i~-~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~a~~~~l~~~~~-- 251 (349)
T cd06454 194 DIIMGTLGKAFGAV-G-GYIA-GSKELIDYLRSYARGFIF-----------------STSLPPAVAAAALAALEVLQG-- 251 (349)
T ss_pred cEEEeechhhhccc-C-CEEE-CCHHHHHHHHHhchhhhc-----------------cCCCCHHHHHHHHHHHHHHhc--
Confidence 99999999999864 3 5554 444443332211111111 01111 122344455544422
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCc
Q 046506 183 LRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGK 262 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 262 (310)
.+++.++..++++++.+.|.++ +++++.++...+..+...+. ....++.+.|.++|.
T Consensus 252 ~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~L~~~gI 308 (349)
T cd06454 252 GPERRERLQENVRYLRRGLKEL-GFPVGGSPSHIIPPLIGDDP----------------------AKAVAFSDALLERGI 308 (349)
T ss_pred CHHHHHHHHHHHHHHHHHHHhc-CCcccCCCCCcEEEEeCCCh----------------------HHHHHHHHHHHhCCc
Confidence 4677888999999999999886 77766544443344433211 122567788888865
Q ss_pred EEEEEeEE----CCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 263 AYMTHAVL----GGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 263 ~~~~~~~~----~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
++.+... .+...+|++++ .+++++|+++++++|+++
T Consensus 309 -~~~~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 309 -YVQAIRYPTVPRGTARLRISLS-AAHTKEDIDRLLEALKEV 348 (349)
T ss_pred -eEEEecCCccCCCCCeEEEEEe-CCCCHHHHHHHHHHHHHh
Confidence 4433211 12478999965 679999999999999875
No 77
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.77 E-value=5.2e-17 Score=151.21 Aligned_cols=229 Identities=14% Similarity=0.107 Sum_probs=146.2
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhh--cCC-CC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI--DGV-EG 102 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~--~~~-~~ 102 (310)
.|+++++++++.... ..+.+|++.+++|++|.+.|+++|+++|++||++++||+||+.+.+. +...+.. .++ ..
T Consensus 161 ~d~~~l~~~l~~~~~--~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g-~~g~g~~~~~~~~~~ 237 (402)
T TIGR01821 161 NDVAHLEKLLQSVDP--NRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYG-PRGGGIAERDGLMHR 237 (402)
T ss_pred CCHHHHHHHHHhccC--CCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccC-CCCCccchhccCCCC
Confidence 477899998874311 12568889999999999999999999999999999999999855431 1111111 111 23
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC-cchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~ 181 (310)
+|++..+..|.++.+. |++ +.++..+.......++|.+ ..+.. ..+.++.++++.+...
T Consensus 238 ~div~~t~sKa~g~~G--G~i-~~~~~~~~~l~~~~~~~~~-----------------t~~~~~~~~aaa~aaL~~~~~~ 297 (402)
T TIGR01821 238 IDIIEGTLAKAFGVVG--GYI-AASRKLIDAIRSYAPGFIF-----------------TTSLPPAIAAGATASIRHLKES 297 (402)
T ss_pred CeEEEEechhhhccCC--cee-ecCHHHHHHHHHhCcCcee-----------------cCcCCHHHHHHHHHHHHHhhcC
Confidence 6888889999998653 444 3444443222111222221 11111 1233444555544222
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcC
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASG 261 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 261 (310)
+.+.++..++.+++.+.|+++ +++++ ++.++++.+.+.. .....++.+.|.++.
T Consensus 298 --~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~i~~i~~~~----------------------~~~a~~~~~~L~~~~ 351 (402)
T TIGR01821 298 --QDLRRAHQENVKRLKNLLEAL-GIPVI-PNPSHIVPVIIGD----------------------AALCKKVSDLLLNKH 351 (402)
T ss_pred --HHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeCC----------------------HHHHHHHHHHHHhcC
Confidence 445566678999999999886 77765 3456677665432 112346777776553
Q ss_pred cEEEEEe----EECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 262 KAYMTHA----VLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 262 ~~~~~~~----~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.+++.+. +..+..++|++++ .++|++||++++++|+++.+++
T Consensus 352 Gi~v~~~~~p~~~~g~~~lRis~~-~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 352 GIYVQPINYPTVPRGTERLRITPT-PAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred CEEEEeECCCCCCCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHHc
Confidence 3555442 2234578999966 5799999999999999988654
No 78
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.76 E-value=4.4e-17 Score=151.67 Aligned_cols=245 Identities=15% Similarity=0.099 Sum_probs=147.6
Q ss_pred eecCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 4 QIVGIDVKNFRAIKTTKS-SSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~-~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+..|.. ++.++.+.+ +++.+|++++++++.+.. +.++++++. ..|...|+++|+++|++||+++++|++
T Consensus 128 ~~~g~~---~~~~~~~~~~~~~~id~~~l~~~i~~~~-----~~~v~~~~~--~~~~~~~~~~I~~l~~~~~~~li~D~a 197 (402)
T cd00378 128 SASGKL---FESVPYGVDPETGLIDYDALEKMALEFK-----PKLIVAGAS--AYPRPIDFKRFREIADEVGAYLLVDMA 197 (402)
T ss_pred ccccee---EEEecCCcCcccCCcCHHHHHHHHHhCC-----CCEEEecCc--ccCCCcCHHHHHHHHHhcCCEEEEEcc
Confidence 344543 666766543 146899999999996431 345555444 346778999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceecc
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITL 162 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 162 (310)
|..+......... .+.++|+++.|+|||+.+|.|.+ ++.+++....+......++....
T Consensus 198 ~~~g~~~~g~~~~---~~~~~dv~~~s~sK~l~G~~gg~-i~~~~~~~~~~l~~~~~~~~~~~----------------- 256 (402)
T cd00378 198 HVAGLVAGGVFPN---PLPGADVVTTTTHKTLRGPRGGL-ILTRKGELAKKINSAVFPGLQGG----------------- 256 (402)
T ss_pred chhhhhhcccCCC---cccCCcEEEeccccCCCCCCceE-EEeccHHHHHHHHHHhCccccCC-----------------
Confidence 8665432211111 11257999999999998787644 44444334332211111111100
Q ss_pred CCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEec-CCCceEEEEEEcCCcchhhhhhhhccccch
Q 046506 163 SRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVF-PRHFAVVCFRVSPSAVMDKLKTKYENSLLS 241 (310)
Q Consensus 163 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
.......++..++.......+++++++..++++++++.|.+. |+.+.. +..++++.+.+.+...
T Consensus 257 ~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~v~v~~~~~~~-------------- 321 (402)
T cd00378 257 PHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGTDNHLVLVDLRPKGI-------------- 321 (402)
T ss_pred chHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCCCCeEEEEeCCccCC--------------
Confidence 000112222333333323366778888999999999999987 888763 3456677777653210
Q ss_pred hHHHHHHHHHHHHHHHHhcCcEEEE---EeEE---CCEeEEEEEccCCCC----CHHHHHHHHHHHHHHHH
Q 046506 242 EEERINEFNRELLESINASGKAYMT---HAVL---GGIYAIRFAAGATLT----EERHVMVAWTVVQEHLE 302 (310)
Q Consensus 242 ~~~~~~~~~~~l~~~l~~~g~~~~~---~~~~---~~~~~iRis~~~~~~----t~edi~~li~~l~~~~~ 302 (310)
+ ...+.+.+.+.|..... |... .....+|++++ ..+ +++||+.+++.|++++.
T Consensus 322 ~-------~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~-~~~~~~~~~~di~~~~~~l~~~~~ 384 (402)
T cd00378 322 T-------GKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTP-AMTTRGMGEEEMEEIADFIARALK 384 (402)
T ss_pred C-------HHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCH-HHHHhCCCHHHHHHHHHHHHHHHh
Confidence 0 02344455556643321 1111 13468999955 333 69999999999998664
No 79
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.76 E-value=1.4e-16 Score=133.88 Aligned_cols=261 Identities=14% Similarity=0.096 Sum_probs=176.9
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcC-CCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEee
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAG-LIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~-~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD 80 (310)
||...|+. |..||......|.++++...+.|.+-++++ ..|.+..+||.....|.+.+.++++++|+++|+++++.
T Consensus 116 AAEragl~---v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN 192 (382)
T COG1103 116 AAERAGLN---VAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLN 192 (382)
T ss_pred HHHhcCCe---EEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEee
Confidence 46677887 999998877789999999999999877764 56889999999999999999999999999999999999
Q ss_pred cccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
+|+..+-.+.+.. .+ ++|+++.|+||.+.+...+|++-++.. +-...+..+..+...... -.+
T Consensus 193 ~AYt~Grmpvs~k-----e~-g~DFiVgSGHKsmAAs~PiGvl~~~eE-~ae~V~r~Sg~~~~~KEv----------ell 255 (382)
T COG1103 193 CAYTVGRMPVSGK-----EI-GADFIVGSGHKSMAASAPIGVLAMSEE-WAEIVLRRSGRAFPKKEV----------ELL 255 (382)
T ss_pred cceeecccccccc-----cc-CCCEEEecCccchhccCCeeEEeehhH-HHHHHHhhccccccccee----------eee
Confidence 9999998876532 22 599999999999998888999987755 322333222222222111 122
Q ss_pred ccCCC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC-CC-ceEEEEEEcCCcchhhhhhhhcc
Q 046506 161 TLSRR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP-RH-FAVVCFRVSPSAVMDKLKTKYEN 237 (310)
Q Consensus 161 ~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~-~~~v~~~~~~~~~~~~~~~~~~~ 237 (310)
.++.| +....+.+++-.. . ..-.+++...+.+++|.+.|.++.|+..++. |. -.++.|-.+.-. .+
T Consensus 256 GCT~rGapivTlmASfP~V-~-eRVkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~---------eI 324 (382)
T COG1103 256 GCTVRGAPIVTLMASFPHV-V-ERVKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFH---------EI 324 (382)
T ss_pred cccccCchHHHHHhcCHHH-H-HHHHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHH---------HH
Confidence 33322 3333333332211 1 1234566778899999999999988988764 33 334444332210 00
Q ss_pred ccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 238 SLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+..+. ...-.+++.|.++|+.-+.+ +....+.+| . +..+.|+++++++++++++++
T Consensus 325 akk~~-----r~gyFlY~ELK~RgI~GI~~---G~Tk~~K~s-v-yGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 325 AKKHK-----RKGYFLYEELKKRGIHGIQP---GQTKYFKLS-V-YGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred HHhCc-----CCceeeHHHHHhcCcccccc---CceeEEEEE-e-ecCCHHHHHHHHHHHHHHHHh
Confidence 00000 00013455566666544333 246788888 4 678999999999999999875
No 80
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.76 E-value=7.8e-17 Score=150.26 Aligned_cols=229 Identities=14% Similarity=0.090 Sum_probs=146.8
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhh--cCC-CC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI--DGV-EG 102 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~--~~~-~~ 102 (310)
.|+++|++.++.... ..+.+|++.+..+++|.+.|+++|.++|++||++++||+||+.+.+. +...... .++ ..
T Consensus 162 ~d~~~le~~l~~~~~--~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g-~~g~g~~~~~~~~~~ 238 (407)
T PRK09064 162 NDVAHLEELLAAADP--DRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYG-PRGGGIAERDGLMDR 238 (407)
T ss_pred CCHHHHHHHHHhccC--CCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccC-CCCCChHHhcCCCCC
Confidence 477899999874321 12568899999999999999999999999999999999999755321 1111111 111 24
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC-cchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~ 181 (310)
.|+++.+.+|.++.+ | |+++ .+++.+.......++|.+ ..+.+ ..+.++.++++.+...
T Consensus 239 ~div~~t~sKa~g~~-G-G~~~-~~~~~~~~l~~~~~~~~~-----------------t~~~~~~~~~aa~~al~~~~~~ 298 (407)
T PRK09064 239 IDIIEGTLAKAFGVM-G-GYIA-GSAALVDAVRSYAPGFIF-----------------TTSLPPAIAAAALASIRHLKES 298 (407)
T ss_pred CeEEEEecchhhhcc-C-ceEe-cCHHHHHHHHHhCccccc-----------------cCcCCHHHHHHHHHHHHHHhcC
Confidence 688888999998754 3 5544 444443222111222221 11111 2234445555554322
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcC
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASG 261 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 261 (310)
....++..++.+++.+.|.++ |++++ ++..+++.+.+.. .....++.+.|.++.
T Consensus 299 --~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~iv~i~~~~----------------------~~~~~~l~~~L~~~~ 352 (407)
T PRK09064 299 --NEERERHQERAAKLKAALDAA-GIPVM-PNESHIVPVMVGD----------------------PEKCKKASDMLLEEH 352 (407)
T ss_pred --HHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCC----------------------HHHHHHHHHHHHHhC
Confidence 344678889999999999886 77765 3456677665532 112356777776543
Q ss_pred cEEEEEe----EECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 262 KAYMTHA----VLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 262 ~~~~~~~----~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.+++.+. +..+..++|+|++ .++|++|+++++++|+++..++
T Consensus 353 gi~v~~~~~p~~~~~~~~lRis~~-~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 353 GIYVQPINYPTVPRGTERLRITPT-PFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred CEEEeeECCCCCCCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHHc
Confidence 3455432 2234578999966 6799999999999999988664
No 81
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.76 E-value=6.3e-17 Score=151.32 Aligned_cols=241 Identities=13% Similarity=0.062 Sum_probs=148.4
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccCh
Q 046506 12 NFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICP 91 (310)
Q Consensus 12 ~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~ 91 (310)
.++.++.+++ ++.+|+++|+++|++.. +.+++++. +..|...|+++|+++|++||+++++|+||+.+.....
T Consensus 139 ~~~~~~~~~~-~~~~d~~~l~~~i~~~~-----~k~v~~~~--~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g 210 (416)
T PRK00011 139 NVVSYGVDEE-TGLIDYDEVEKLALEHK-----PKLIIAGA--SAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAG 210 (416)
T ss_pred eEeecCcCcc-cCCcCHHHHHHHHHhcC-----CCEEEECC--CcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccC
Confidence 3677777743 36899999999997531 33555432 3457778999999999999999999999976654321
Q ss_pred hhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHH
Q 046506 92 EFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKL 171 (310)
Q Consensus 92 ~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (310)
.... .+.++|+++.|+||++.+|.|. +++.+++............+..... ......++
T Consensus 211 ~~~~---~~~~~di~~~S~~K~l~g~~gg-~i~~~~~~~~~~l~~~~~~~~~~~~-----------------~~~~~aa~ 269 (416)
T PRK00011 211 VHPS---PVPHADVVTTTTHKTLRGPRGG-LILTNDEELAKKINSAVFPGIQGGP-----------------LMHVIAAK 269 (416)
T ss_pred ccCC---CCCCCcEEEecCCcCCCCCCce-EEEeCCHHHHHHHHHHhCccccCCc-----------------cHHHHHHH
Confidence 1111 1125899999999999877654 4545444443322111111110000 00112223
Q ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEec-CCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHH
Q 046506 172 WFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVF-PRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFN 250 (310)
Q Consensus 172 ~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (310)
..++.....++++++.++..++++++++.|.+. |+++.. ....+++.+.+.+... ..
T Consensus 270 ~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~~~~~---------------------~~ 327 (416)
T PRK00011 270 AVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDNHLVLVDLRSKGL---------------------TG 327 (416)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCCeEEEEeCcccCC---------------------CH
Confidence 333333334567889999999999999999986 787763 2345677676643210 01
Q ss_pred HHHHHHHHhcCcEEEEE---e---EECCEeEEEEEccC---CCCCHHHHHHHHHHHHHHHHH
Q 046506 251 RELLESINASGKAYMTH---A---VLGGIYAIRFAAGA---TLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 251 ~~l~~~l~~~g~~~~~~---~---~~~~~~~iRis~~~---~~~t~edi~~li~~l~~~~~~ 303 (310)
.++.+.|.+.|...... . .......+|++... ...+++|+++++++|++++..
T Consensus 328 ~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 328 KEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred HHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 34666676677543211 1 11123468986321 235799999999999987654
No 82
>PLN02271 serine hydroxymethyltransferase
Probab=99.75 E-value=9.6e-17 Score=150.13 Aligned_cols=256 Identities=9% Similarity=0.028 Sum_probs=160.9
Q ss_pred eecCCCCCCEEEEe--cCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeec
Q 046506 4 QIVGIDVKNFRAIK--TTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 4 ~~~g~~~~~v~~v~--~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
...|+. +..+| .++. ++.+|.+++++..... +|.+|++.+..+. ...|+++|+++|+++|++++||+
T Consensus 265 s~sG~~---~~~vpY~~d~~-~g~IDyd~lek~a~~~-----rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~ 333 (586)
T PLN02271 265 SGASIF---FESLPYKVNPQ-TGYIDYDKLEEKALDF-----RPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDM 333 (586)
T ss_pred ccccce---EEEEEcccccc-cCccCHHHHHHHhhhc-----CCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEEC
Confidence 334544 56666 5543 4689999999965432 2677777655554 56889999999999999999999
Q ss_pred ccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccc-----cccccCC-
Q 046506 82 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATE-----SKQVVDY- 155 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~-----~~~~~~~- 155 (310)
||.+|.+....+.. -+.++|++++++||||.+|.| |++++++... ... .+-....+.. ....++.
T Consensus 334 AH~aGLIa~g~~~s---P~~~aDvvt~TTHKtLrGPrG-G~I~~r~~~~--~~~---~g~~gs~s~~~~~~d~~~kI~~a 404 (586)
T PLN02271 334 AHISGLVAAKECVN---PFDYCDIVTSTTHKSLRGPRG-GIIFYRKGPK--LRK---QGMLLSHGDDNSHYDFEEKINFA 404 (586)
T ss_pred cccccccccCcCCC---CCcCCcEEEeCCcccCCCCCc-eEEEeccccc--ccc---cCCccccccccccHHHHHHhhcc
Confidence 99999887654421 133699999999999999999 7777765411 110 0000000000 0000111
Q ss_pred CCceeccCCCc-chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC-CCceEEEEEEcCCcchhhhhh
Q 046506 156 KDWQITLSRRF-RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP-RHFAVVCFRVSPSAVMDKLKT 233 (310)
Q Consensus 156 ~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~~~~v~~~~~~~~~~~~~~~ 233 (310)
....+|+|... ..+++..+++......+.+..++..+|++.|.+.|.+. |++++.. .+..++.+.+.+.++.
T Consensus 405 VfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~-G~~vv~ggTdnHlvLvDl~~~g~~----- 478 (586)
T PLN02271 405 VFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRR-KCRLVTGGTDNHLLLWDLTTLGLT----- 478 (586)
T ss_pred cCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-CCeEeeCCCCcceeeecCcccCCC-----
Confidence 11145555442 34566677777666778999999999999999999886 9998853 4567777777653211
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEe----E--ECCEeEEEEEcc---CCCCCHHHHHHHHHHHHHHHH
Q 046506 234 KYENSLLSEEERINEFNRELLESINASGKAYMTHA----V--LGGIYAIRFAAG---ATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~----~--~~~~~~iRis~~---~~~~t~edi~~li~~l~~~~~ 302 (310)
. ....+.|.+-| +.+... . ....+.||+... .....++|++.+.+.|.+.+.
T Consensus 479 -------------G---~~ae~~Le~~~-I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 479 -------------G---KNYEKVCEMCH-ITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred -------------H---HHHHHHHHHcC-eEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 1 22333343334 333211 1 112457888622 233456888887777776654
No 83
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.75 E-value=1.4e-16 Score=148.04 Aligned_cols=224 Identities=11% Similarity=-0.011 Sum_probs=152.1
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhc--C-CC
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID--G-VE 101 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~--~-~~ 101 (310)
+-|+++|+++|+.... ...+|++....++.|.+.|+++|.++|++||++|+||.||+.+.+. +..++... + ..
T Consensus 233 HND~~~Le~~L~~~~~---~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G-~~G~G~~e~~g~~~ 308 (476)
T PLN02955 233 HCDMYHLNSLLSSCKM---KRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCG-ENGGGVAEEFNCEA 308 (476)
T ss_pred CCCHHHHHHHHHhCCC---CceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceec-CCCCcHHHHhCCCC
Confidence 4689999999976532 2357888889999999999999999999999999999999877543 22222221 1 13
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
..|+++.+..|.++.. |.+++.++............|++..+. -++.+.+..++++.+..+
T Consensus 309 di~ii~~TLsKA~G~~---GGfi~gs~~~~~~l~~~~~~~ifStal----------------pp~~aaa~laal~l~~~~ 369 (476)
T PLN02955 309 DVDLCVGTLSKAAGCH---GGFIACSKKWKQLIQSRGRSFIFSTAI----------------PVPMAAAAYAAVVVARKE 369 (476)
T ss_pred CCcEEEEeCccchhcc---CceeecHHHHHHHHHHhCCCCeecccc----------------cHHHHHHHHHHHHHHhcC
Confidence 5899999999998754 334445554432222334455554421 011233344455544222
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcC
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASG 261 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 261 (310)
..++++++++.+++++.+ |+.+ .++|+.+.+.. +.....+.+.|.++|
T Consensus 370 --~~~r~~L~~n~~~fr~~~----G~~~----~sPI~pI~ig~----------------------~~~a~~~~~~L~~~G 417 (476)
T PLN02955 370 --KWRRKAIWERVKEFKALS----GVDI----SSPIISLVVGN----------------------QEKALKASRYLLKSG 417 (476)
T ss_pred --HHHHHHHHHHHHHHHHhc----CCCC----CCCEEEEEeCC----------------------HHHHHHHHHHHHHCC
Confidence 347788889999998842 4442 36778777765 333456788898898
Q ss_pred cEEE---EEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 262 KAYM---THAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 262 ~~~~---~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.+.. .|+++.+...+|++++ ...|++||++++++|.++...+
T Consensus 418 i~v~~i~yPtVP~g~~rLRi~ls-A~Ht~edId~lv~~L~~~~~~~ 462 (476)
T PLN02955 418 FHVMAIRPPTVPPNSCRLRVTLS-AAHTTEDVKKLITALSSCLDFD 462 (476)
T ss_pred CEEEEECCCCCCCCCceEEEeeC-CCCCHHHHHHHHHHHHHHHhhh
Confidence 5422 2456678889999977 5799999999999999876543
No 84
>PLN02822 serine palmitoyltransferase
Probab=99.75 E-value=6.3e-16 Score=146.50 Aligned_cols=247 Identities=10% Similarity=0.043 Sum_probs=155.7
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHc----CCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccc
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEA----GLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSAC 88 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~----~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~ 88 (310)
+++++.+ |+++++..+.+.... .....+|++....+++|.+.|+++|+++|++||+++++|.+|+.+.+
T Consensus 217 ~~~~~~n-------d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvl 289 (481)
T PLN02822 217 IVYFKHN-------DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVL 289 (481)
T ss_pred EEEECCC-------CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCcccccc
Confidence 6666553 356677777653221 11125788888889999999999999999999999999999985544
Q ss_pred cChhhhhhh--cCC--CCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCC
Q 046506 89 ICPEFRHFI--DGV--EGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSR 164 (310)
Q Consensus 89 ~~~~~~~~~--~~~--~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 164 (310)
. ...++.. .++ ..+|+++.+.+|.++++ | |++ +.++..++........|.+ .++.
T Consensus 290 G-~~G~G~~e~~~v~~~~~dii~~s~sKalg~~-G-G~i-~g~~~ii~~~~~~~~~~~f-----------------sa~l 348 (481)
T PLN02822 290 G-KSGRGLSEHFGVPIEKIDIITAAMGHALATE-G-GFC-TGSARVVDHQRLSSSGYVF-----------------SASL 348 (481)
T ss_pred C-CCCCChHHHcCCCCCCCeEEEecchhhhhhC-C-eEE-EcCHHHHHHHHhcCCceee-----------------cccc
Confidence 2 1111111 112 24799999999999754 3 444 4555444322111112222 1121
Q ss_pred C-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhH
Q 046506 165 R-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEE 243 (310)
Q Consensus 165 ~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
+ +.+.+..++++.+ +...++.++++++.+++++.|.+++|+.+..++.++++.+.+....- ...
T Consensus 349 Pp~~~~Aa~~aL~~l--~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~~~~~-------------~~~ 413 (481)
T PLN02822 349 PPYLASAAITAIDVL--EDNPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLEKSTG-------------SAK 413 (481)
T ss_pred CHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeCCCcc-------------ccc
Confidence 2 1223333455433 22367888999999999999998878888766778888888854200 000
Q ss_pred HHHHHHHHHHHHHHH-hcCcEEEEEeEE---C---CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 244 ERINEFNRELLESIN-ASGKAYMTHAVL---G---GIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 244 ~~~~~~~~~l~~~l~-~~g~~~~~~~~~---~---~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
.+ ....+++.++|. ++| +++.+..+ + ....+|++++ ..+|++||++++++|++++..+.
T Consensus 414 ~~-~~~~~~~~~~Ll~e~G-V~v~~~~~~~~~~~~~~~~lRi~is-~~~t~edI~~~~~~l~~~~~~~~ 479 (481)
T PLN02822 414 ED-LSLLEHIADRMLKEDS-VLVVVSKRSTLDKCRLPVGIRLFVS-AGHTESDILKASESLKRVAASVL 479 (481)
T ss_pred ch-HHHHHHHHHHHHhcCC-EEEEeeCCCCcCCCCCCCcEEEEEC-CCCCHHHHHHHHHHHHHHHHHHh
Confidence 00 223457788887 556 45543311 1 1357999966 56899999999999999887754
No 85
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.75 E-value=6e-17 Score=147.18 Aligned_cols=242 Identities=15% Similarity=0.057 Sum_probs=150.1
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCH--HHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHH---HHHHHhCcEE
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSP--DSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLC---DVAKQFGIWV 77 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~--~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~---~l~~~~g~~l 77 (310)
++..|.. ++.++.++++ .++. +.++..+.+. +.+|+++++++++|.+.|++++. ++|+++|+++
T Consensus 100 ~~~~~~~---~~~i~~~~~~--~~~~~~~~~~~~~~~~------~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ 168 (350)
T cd00609 100 ARLAGAE---VVPVPLDEEG--GFLLDLELLEAAKTPK------TKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILI 168 (350)
T ss_pred HHHCCCE---EEEEeccccc--CCccCHHHHHhhcCcc------ceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEE
Confidence 4455665 8899998754 4444 5666555433 55888888999999999866554 8999999999
Q ss_pred EeecccccccccChhhhh-hhcCCCCCCeeeeecccccc-cccceEEEEEeCchhHHhhhccCCccccccccccccccCC
Q 046506 78 HVDAAYAGSACICPEFRH-FIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDY 155 (310)
Q Consensus 78 ~vD~a~~~~~~~~~~~~~-~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 155 (310)
++|+||+++......... ......+.|++..++||+++ .+.+.|+++++++...+. +.....+...
T Consensus 169 ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~-~~~~~~~~~~----------- 236 (350)
T cd00609 169 ISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLER-LKKLLPYTTS----------- 236 (350)
T ss_pred EEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHH-HHHHHHhccc-----------
Confidence 999999876643321100 01112347889999999998 456788888766444332 2111111000
Q ss_pred CCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhh
Q 046506 156 KDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
.........+..+++.. .+++++..++..++++++.+.|.+.+...+..++....+.+.+.+..
T Consensus 237 ------~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~~--------- 300 (350)
T cd00609 237 ------GPSTLSQAAAAAALDDG-EEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEGD--------- 300 (350)
T ss_pred ------CCChHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCCC---------
Confidence 00011223333444322 26788889999999999999999875544333344555556554421
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE--CCEeEEEEEccCCCCCHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKAYMTHAVL--GGIYAIRFAAGATLTEERHVMVAWTVVQE 299 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~~~~~iRis~~~~~~t~edi~~li~~l~~ 299 (310)
..+.+.+.+.+.|......... .+...+|++++. + ++|+++++++|++
T Consensus 301 -------------~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~-~--~~~i~~~~~al~~ 350 (350)
T cd00609 301 -------------DEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFAT-P--EEELEEALERLAE 350 (350)
T ss_pred -------------hHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeC-C--HHHHHHHHHHhhC
Confidence 0124445555556433332222 256799999774 3 9999999999863
No 86
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.74 E-value=3.5e-16 Score=146.01 Aligned_cols=227 Identities=13% Similarity=0.107 Sum_probs=145.3
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhh--cC-CCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI--DG-VEGA 103 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~--~~-~~~~ 103 (310)
|++++++.+.+... ..+.+|++.+++|++|.+.|+++|.++|++||++++||+||+.+.+. +...+.. .+ ...+
T Consensus 163 d~~~l~~~l~~~~~--~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g-~~g~g~~~~~~~~~~~ 239 (410)
T PRK13392 163 DLADLEEQLASVDP--DRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYG-ARGGGIAERDGLMDRI 239 (410)
T ss_pred CHHHHHHHHHhccC--CCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcC-CCCCchhhhccCCCCC
Confidence 45677777764321 13568899999999999999999999999999999999999855432 1111111 11 2347
Q ss_pred CeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC-cchHHHHHHHHHhCHHH
Q 046506 104 DSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 104 D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~ 182 (310)
|+++.+.+|+++.+. |++. .++..+........+|..... .+ ..+.++.++++.+. .
T Consensus 240 div~~tlsK~~g~~G--G~~~-~~~~~~~~l~~~~~~~~~s~~-----------------~~~~~~~a~~aaL~~~~--~ 297 (410)
T PRK13392 240 DMIQGTLAKAFGCLG--GYIA-ASADLIDFVRSFAPGFIFTTA-----------------LPPAVAAGATAAIRHLK--T 297 (410)
T ss_pred cEEEEEChHhhhccc--chhh-cCHHHHHHHHHhCcchhccCc-----------------CCHHHHHHHHHHHHHHh--c
Confidence 888899999998763 4443 445444322222222322111 11 12334445555432 2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh-cC
Q 046506 183 LRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA-SG 261 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g 261 (310)
.....++..++.+++.+.|+++ |+++. ++.++++.+.+.. .....++.++|.+ .|
T Consensus 298 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~i~~~~----------------------~~~~~~~~~~L~~~~G 353 (410)
T PRK13392 298 SQTERDAHQDRVAALKAKLNAN-GIPVM-PSPSHIVPVMVGD----------------------PTLCKAISDRLMSEHG 353 (410)
T ss_pred CHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCC----------------------HHHHHHHHHHHHHhCC
Confidence 3345577788899999999886 77765 4566776555432 1122467777764 45
Q ss_pred cEEEEEeE----ECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 262 KAYMTHAV----LGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 262 ~~~~~~~~----~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+++.+.. ..+..++|++++ ..+|++|+++++++|+++.+++
T Consensus 354 -I~v~~~~~p~~~~~~~~lRis~~-~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 354 -IYIQPINYPTVPRGTERLRITPT-PLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred -EEEeeeCCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHHc
Confidence 5554432 234578999966 5789999999999999887653
No 87
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.73 E-value=1.3e-15 Score=141.38 Aligned_cols=231 Identities=14% Similarity=0.055 Sum_probs=144.1
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChh--hhhhhcCC-CC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPE--FRHFIDGV-EG 102 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~--~~~~~~~~-~~ 102 (310)
.|++++++.+++.......+.+|+..+..+.+|.+.|+++|.++|++||+++++|++|+.+...... ... ..++ ..
T Consensus 156 ~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~-~~~~~~~ 234 (397)
T PRK06939 156 NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVE-HFGVMDR 234 (397)
T ss_pred CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHH-HcCCCCC
Confidence 5789999999764332223556777777888999999999999999999999999999644332110 011 1111 24
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC-cchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~ 181 (310)
+|+++.|+||+++++. .|+++.+ +..++.......++... ++.. ..+.++.++++.+.
T Consensus 235 ~~i~~~S~sK~~~g~r-~G~v~~~-~~~~~~l~~~~~~~~~~-----------------~~~~~~~~~a~~~al~~~~-- 293 (397)
T PRK06939 235 VDIITGTLGKALGGAS-GGYTAGR-KEVIDWLRQRSRPYLFS-----------------NSLAPAIVAASIKVLELLE-- 293 (397)
T ss_pred CcEEEEECHHHhCccC-ceEEEeC-HHHHHHHHHhCcccccc-----------------CCCCHHHHHHHHHHHHHHh--
Confidence 7899999999997664 4666654 43443321111111111 1101 11233344454432
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcC
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASG 261 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 261 (310)
..+++.++..++.+++.+.|.++ ++++. ++..+++.+.+.+ .....++.+.|.++|
T Consensus 294 ~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~----------------------~~~~~~~~~~L~~~g 349 (397)
T PRK06939 294 ESDELRDRLWENARYFREGMTAA-GFTLG-PGEHPIIPVMLGD----------------------AKLAQEFADRLLEEG 349 (397)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEECC----------------------HHHHHHHHHHHHHCC
Confidence 23567788888999999999876 66654 3344444443322 111246778888887
Q ss_pred cEEEEEeEE----CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 262 KAYMTHAVL----GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 262 ~~~~~~~~~----~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.... +..+ .+...+|++++ .++++++|+++++.|+++++++
T Consensus 350 I~v~-~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 350 VYVI-GFSFPVVPKGQARIRTQMS-AAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred ceEe-eeCCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 5433 3322 23468999966 4688999999999999887653
No 88
>PLN02483 serine palmitoyltransferase
Probab=99.72 E-value=1.4e-15 Score=144.52 Aligned_cols=247 Identities=13% Similarity=0.044 Sum_probs=152.5
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcC-------CCcEEEEEeccCCcccccCChHHHHHHHHHhCcE
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAG-------LIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIW 76 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~-------~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~ 76 (310)
+..|+. ++.++.+ |+++|++.|++....+ ....+|++....++.|.+.++++|+++|++||++
T Consensus 203 ~~~Ga~---v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~ 272 (489)
T PLN02483 203 RGSGAT---IRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAY 272 (489)
T ss_pred HHcCCe---EEEEeCC-------CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCE
Confidence 445665 7777753 4578888776532110 1123566667779999999999999999999999
Q ss_pred EEeecccccccccChhhhhh--hcC--CCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccc
Q 046506 77 VHVDAAYAGSACICPEFRHF--IDG--VEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQV 152 (310)
Q Consensus 77 l~vD~a~~~~~~~~~~~~~~--~~~--~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~ 152 (310)
+++|+||+.+... +..++. ..+ ..++|+++.+++|+++++ | |++ +.+++.+.......+.+.....
T Consensus 273 livDEa~s~g~~G-~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~-G-G~i-~~~~~li~~l~~~~~~~~~~~~------ 342 (489)
T PLN02483 273 VYLDEAHSIGAVG-KTGRGVCELLGVDPADVDIMMGTFTKSFGSC-G-GYI-AGSKELIQYLKRTCPAHLYATS------ 342 (489)
T ss_pred EEEECcCccCccC-CCCCchHHhcCCCcccCcEEEEecchhcccC-c-eEE-EcCHHHHHHHHHhCccccccCC------
Confidence 9999999755431 111110 011 135799999999998754 3 554 4555444332222222211110
Q ss_pred cCCCCceeccCCCcchHHHHHHHHHhC----HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcch
Q 046506 153 VDYKDWQITLSRRFRSLKLWFVLRNYG----VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVM 228 (310)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~ 228 (310)
.-+..+..+.++++.+. .+...++.++..++.+++++.|+++ |+.+..+...+++.+.+...
T Consensus 343 ----------~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~-G~~v~~~~~sp~~~l~l~~~--- 408 (489)
T PLN02483 343 ----------MSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNP--- 408 (489)
T ss_pred ----------cCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCEEEEEECCH---
Confidence 00112222334454331 1234566788999999999999987 88877555555666555431
Q ss_pred hhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeE---ECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 229 DKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAV---LGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
....++.+.|.++|........ ....+.+|++++ ..+|+|||++++++|+++...+
T Consensus 409 -------------------~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~is-a~~t~edId~~l~~L~~~~~~~ 467 (489)
T PLN02483 409 -------------------AKIPAFSRECLKQNVAVVVVGFPATPLLLARARICIS-ASHSREDLIKALEVISEVGDLV 467 (489)
T ss_pred -------------------HHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 1113566777777754443211 223478999976 4688999999999999988765
No 89
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.72 E-value=3.3e-16 Score=157.36 Aligned_cols=210 Identities=16% Similarity=0.123 Sum_probs=140.1
Q ss_pred EEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeeeeecccc-----cccccceE
Q 046506 47 FLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKW-----FFTTLDCC 121 (310)
Q Consensus 47 ~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~-----l~~p~g~g 121 (310)
..++.+.++.+|.+.|+++|+++||++|++++||+.+.+..+.-+- .. .++|+++.++||| +++| ++|
T Consensus 208 ~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~p-----ge-~GaDi~vgs~qkfg~P~g~GGP-~aG 280 (954)
T PRK05367 208 FGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPP-----GE-MGADIAVGSAQRFGVPMGFGGP-HAA 280 (954)
T ss_pred EEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCCh-----hh-cCCCEEEeeCcccCCCCCCCCC-CEE
Confidence 4556677888999999999999999999999999976433332221 11 2699999999999 5556 599
Q ss_pred EEEEeCchhHHhhhccCCccccccccccccccCCC--------CceeccCCC-cc-hHHHHH-----HHHHhCHHHHHHH
Q 046506 122 CLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK--------DWQITLSRR-FR-SLKLWF-----VLRNYGVANLRHF 186 (310)
Q Consensus 122 ~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~--------~~~~~~~~~-~~-~~~~~~-----~l~~~~~~~~~~~ 186 (310)
++++++. . .+.+ |+.+-+...+..+...++ ....+.+.+ .. ..++.+ .+..+|..|++++
T Consensus 281 flavr~~-~-~r~l---pgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~I 355 (954)
T PRK05367 281 YFAVRDA-Y-KRSM---PGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAI 355 (954)
T ss_pred EEEECHH-H-HhhC---CCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 9999865 2 2332 222222211111111111 011121111 11 111222 2355789999999
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEE
Q 046506 187 LRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMT 266 (310)
Q Consensus 187 ~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~ 266 (310)
.++...++.+++++|.+ +|+++..++.++++++..... ..++.+++.+.|... .
T Consensus 356 a~~~~~la~~l~~~L~~-~G~~~~~~~~f~~~~~~~~~~------------------------~~~i~~~l~~~gi~~-~ 409 (954)
T PRK05367 356 ARRVHRLAAILAAGLRA-LGLEVVHDSFFDTLTVEVGGD------------------------AAAVLARALAAGINL-R 409 (954)
T ss_pred HHHHHHHHHHHHHHHHh-cCcccCCCCCCCeEEEeCCCC------------------------HHHHHHHHHHCCcee-c
Confidence 99999999999999987 599988776778888875321 146778888887533 1
Q ss_pred EeEECCEeEEEEEccCCCCCHHHHHHHHHHHH
Q 046506 267 HAVLGGIYAIRFAAGATLTEERHVMVAWTVVQ 298 (310)
Q Consensus 267 ~~~~~~~~~iRis~~~~~~t~edi~~li~~l~ 298 (310)
. .....+|+|++ ..+|++||++++++|.
T Consensus 410 ~---~~~~~l~is~~-e~~t~~did~l~~~l~ 437 (954)
T PRK05367 410 R---VDDDHVGISLD-ETTTREDLAALLAVFG 437 (954)
T ss_pred c---ccCCEEEEEec-ccCCHHHHHHHHHHHc
Confidence 1 12346999966 6899999999999997
No 90
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.71 E-value=9.3e-16 Score=130.36 Aligned_cols=233 Identities=12% Similarity=0.026 Sum_probs=155.9
Q ss_pred cccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChh--hhhhhcCCC
Q 046506 24 YGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPE--FRHFIDGVE 101 (310)
Q Consensus 24 ~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~--~~~~~~~~~ 101 (310)
+++|+-+||..+.+..+. +-.+|+.....+|.|.+.|+++|++++++||++|++|.+|+.+++.-.. ..+...-..
T Consensus 175 ~h~dv~~l~~~l~~a~k~--r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~ 252 (417)
T KOG1359|consen 175 RHVDVFDLEHCLISACKM--RLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMG 252 (417)
T ss_pred ccchhHHHHHHHHHhhhh--eEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCC
Confidence 378888999888765442 2347777888899999999999999999999999999999877653321 111112235
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhh-ccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCH
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSL-STNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGV 180 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~-~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 180 (310)
.+|.+..+..|.+++.. |.+...+..++ ..+ +..-+|+++..- +.+--.-+++++..+
T Consensus 253 ~vdiinsTLgKAlGga~--GGyttgp~~li-~llrqr~RpylFSnsl-------------ppavV~~a~ka~dll----- 311 (417)
T KOG1359|consen 253 DVDIINSTLGKALGGAS--GGYTTGPKPLI-SLLRQRSRPYLFSNSL-------------PPAVVGMAAKAYDLL----- 311 (417)
T ss_pred cceehhhhhhhhhcCCC--CCCccCChhHH-HHHHhcCCceeecCCC-------------ChhhhhhhHHHHHHH-----
Confidence 69999999999998542 34444555443 333 444567765531 111001122222221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhc
Q 046506 181 ANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINAS 260 (310)
Q Consensus 181 ~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 260 (310)
-.-.....+...+.+++++.+.. .||.+.+.. -+|..+.+.. .+++....+.|.+.
T Consensus 312 m~s~~~i~~~~a~~qrfr~~me~-aGftIsg~~-hPI~pv~lGd----------------------a~lA~~~ad~lLk~ 367 (417)
T KOG1359|consen 312 MVSSKEIQSRQANTQRFREFMEA-AGFTISGAS-HPICPVMLGD----------------------ARLASKMADELLKR 367 (417)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHh-cCceecCCC-CCccceeccc----------------------HHHHHHHHHHHHhc
Confidence 12234455566788999999986 499987542 3444444443 45666778888889
Q ss_pred CcEEEE---EeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 261 GKAYMT---HAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 261 g~~~~~---~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
|.+.+. |.++.+...||+.++. ..|+||||++++++.+++..+
T Consensus 368 Gi~Vigfs~PvVP~gkariRVqiSA-aHt~edid~~i~Af~~vgr~~ 413 (417)
T KOG1359|consen 368 GIYVIGFSYPVVPKGKARIRVQISA-AHTEEDIDRLIEAFSEVGRFL 413 (417)
T ss_pred CceEEeecCCcCCCCceEEEEEEeh-hcCHHHHHHHHHHHHHHHHhh
Confidence 865333 5566789999999775 578999999999999988654
No 91
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.71 E-value=1.2e-15 Score=141.05 Aligned_cols=223 Identities=13% Similarity=0.056 Sum_probs=139.9
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccCh--hhhhhhcCC--C
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICP--EFRHFIDGV--E 101 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~--~~~~~~~~~--~ 101 (310)
.|++++++++++... .+.++++.+..|.+|.+.|+++|+++|++||+++++|++|+.+.+... .... ...+ .
T Consensus 153 ~d~~~l~~~i~~~~~---~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~-~~~~~~~ 228 (385)
T PRK05958 153 NDVDALEALLAKWRA---GRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAA-EAGLAGE 228 (385)
T ss_pred CCHHHHHHHHHhccC---CCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHH-hhCCCCC
Confidence 378999999975311 134666667788899999999999999999999999999976543211 1111 0111 1
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC-cchHHHHHHHHHhCH
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWFVLRNYGV 180 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~ 180 (310)
.-+++..+.||+++. .| |+++ .+++..+........+.. .++.. ....++.++++.+..
T Consensus 229 ~~~i~~~s~sK~~~~-~G-g~~~-~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~aa~~aal~~~~~ 288 (385)
T PRK05958 229 PDVILVGTLGKALGS-SG-AAVL-GSETLIDYLINRARPFIF-----------------TTALPPAQAAAARAALRILRR 288 (385)
T ss_pred CceEEEEechhhccc-CC-cEEE-cCHHHHHHHHHhCcccee-----------------cCCCCHHHHHHHHHHHHHHhc
Confidence 234678999999975 34 5554 445433222111111211 11111 122334455554422
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhc
Q 046506 181 ANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINAS 260 (310)
Q Consensus 181 ~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 260 (310)
. +++.++..++.+++.+.|+++ ++++. ++..+++.+.++. .....++.+.|.++
T Consensus 289 ~--~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~----------------------~~~~~~~~~~l~~~ 342 (385)
T PRK05958 289 E--PERRERLAALIARLRAGLRAL-GFQLM-DSQSAIQPLIVGD----------------------NERALALAAALQEQ 342 (385)
T ss_pred C--HHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeCC----------------------HHHHHHHHHHHHHC
Confidence 2 567888899999999999876 67654 4566777776643 11234677888777
Q ss_pred CcEEEEEe-E---ECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 261 GKAYMTHA-V---LGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 261 g~~~~~~~-~---~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
|. .+.+. . ..+..++|+|++ .+++++|++.++++|+++
T Consensus 343 gI-~v~~~~~~~~~~~~~~lRis~~-~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 343 GF-WVGAIRPPTVPAGTSRLRITLT-AAHTEADIDRLLEALAEA 384 (385)
T ss_pred Cc-eEecccCCCCCCCCceEEEEec-CCCCHHHHHHHHHHHHhc
Confidence 65 44321 1 123468999965 578999999999999875
No 92
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.71 E-value=2.1e-15 Score=140.55 Aligned_cols=229 Identities=13% Similarity=0.078 Sum_probs=144.8
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhh--cCC-CC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI--DGV-EG 102 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~--~~~-~~ 102 (310)
.|++++++.+...+. ..+.+|++.+.++++|.+.|+++|.++|++||++++||++|+.+.+. +...+.. .++ ..
T Consensus 161 ~d~~~l~~~l~~~~~--~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g-~~G~g~~~~~~~~~~ 237 (406)
T PRK13393 161 NDPADLERKLSDLDP--HRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYG-PRGGGIAEREGLADR 237 (406)
T ss_pred CCHHHHHHHHHhccC--CCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccC-CCCCchhhhcCCCCC
Confidence 467889888864321 12457888999999999999999999999999999999999855431 1111111 111 23
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC-cchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~ 181 (310)
.|++..+..|.++.+. |++ +.++...........+|.. ..+.+ ..+.++.++++.+...
T Consensus 238 ~~i~~~tlsKa~g~~G--G~~-~~~~~~~~~l~~~~~~~~~-----------------t~~~~p~~~aa~~aaL~~~~~~ 297 (406)
T PRK13393 238 LTIIEGTLAKAFGVMG--GYI-TGSAALCDFIRSFASGFIF-----------------TTSLPPAVAAGALASVRHLKAS 297 (406)
T ss_pred CeEEEEeCchhhcccC--cee-eCCHHHHHHHHHhCcCcee-----------------cCccCHHHHHHHHHHHHHHhhC
Confidence 5788789999998653 444 4445433222111112221 11111 1234455666654322
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcC
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASG 261 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 261 (310)
. ...++..++.+++++.|+++ +++++ ++..+++.+.+.. .....++.+.|.++.
T Consensus 298 ~--~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~i~~v~~~~----------------------~~~~~~l~~~L~~~~ 351 (406)
T PRK13393 298 S--AERERHQDRVARLRARLDKA-GIPHL-PNPSHIVPVMVGD----------------------PVLCKQISDELLDRY 351 (406)
T ss_pred H--HHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCeEEEEeCC----------------------HHHHHHHHHHHHHhC
Confidence 2 23456678899999999875 67655 4456666665432 112346777787752
Q ss_pred cEEEEEe----EECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 262 KAYMTHA----VLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 262 ~~~~~~~----~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.+++.+. +..+...+|+|++ .++|++|+++++++|+++..++
T Consensus 352 Gi~v~~~~~p~~p~g~~~iRis~~-~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 352 GIYVQPINYPTVPRGTERLRITPS-PLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred CEEEEeECCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHhc
Confidence 3454432 2335578999966 6899999999999999987654
No 93
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.69 E-value=1.3e-15 Score=142.16 Aligned_cols=183 Identities=17% Similarity=0.165 Sum_probs=118.0
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCee
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSF 106 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~ 106 (310)
|+++++++|+++ +.+|++.+.+|++|.+.|+++|+++||++|++++||++|+.+....+. . .++|++
T Consensus 144 d~e~l~~ai~~~------tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~~pl------~-~GaDiv 210 (436)
T PRK07812 144 DLDAWRAAVRPN------TKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLIRPL------E-HGADIV 210 (436)
T ss_pred CHHHHHHhCCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCCch------h-cCCCEE
Confidence 889999998765 348999999999999999999999999999999999999866543221 1 269999
Q ss_pred eeeccccccccc-ceEEEEEeCchh-HHhh-----hccCCccccccccc--ccccc-CCC-CceeccCCCcchHHHHHHH
Q 046506 107 SLNAHKWFFTTL-DCCCLWVKDPSD-LVNS-----LSTNPEYLKNKATE--SKQVV-DYK-DWQITLSRRFRSLKLWFVL 175 (310)
Q Consensus 107 ~~~~hK~l~~p~-g~g~l~v~~~~~-~~~~-----~~~~~~y~~~~~~~--~~~~~-~~~-~~~~~~~~~~~~~~~~~~l 175 (310)
+.|+||+++++. ..|++++..... .... ...+++|......+ ..... ..+ .+....|-......+|..+
T Consensus 211 v~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~ 290 (436)
T PRK07812 211 VHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLIA 290 (436)
T ss_pred EEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHh
Confidence 999999998763 266666644321 1000 01112211100000 00000 000 0001112223344555443
Q ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC------------------CceEEEEEEcC
Q 046506 176 RNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR------------------HFAVVCFRVSP 224 (310)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~------------------~~~~v~~~~~~ 224 (310)
.|...+..++++..++|..+.+.|++.|++.-+.-| ..++++|.+.+
T Consensus 291 --rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~ 355 (436)
T PRK07812 291 --QGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAG 355 (436)
T ss_pred --cCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCcCCCceEEEEEecC
Confidence 477889999999999999999999999988543211 14588888864
No 94
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.69 E-value=1.4e-15 Score=140.82 Aligned_cols=158 Identities=17% Similarity=0.225 Sum_probs=112.7
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
..|+. +++++.+ |++++++++++++ .+|++.+++|++|.+.|+++|+++|+++|++++||++++
T Consensus 115 ~~G~~---v~~v~~~-------d~~~l~~~l~~~t------klV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~ 178 (390)
T PRK08064 115 RFGIE---HTFVDMT-------NLEEVAQNIKPNT------KLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFL 178 (390)
T ss_pred HcCCE---EEEECCC-------CHHHHHHhcCCCc------eEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCC
Confidence 35665 7777653 5789999887653 488899999999999999999999999999999999997
Q ss_pred cccccChhhhhhhcCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceecc
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITL 162 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 162 (310)
.+....+. . .++|+++.|+||+++++.| .|++++++++...+.......+
T Consensus 179 ~~~~~~~~------~-~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~--------------------- 230 (390)
T PRK08064 179 TPLLQKPL------D-LGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSF--------------------- 230 (390)
T ss_pred cccccCch------h-hCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhc---------------------
Confidence 65432221 1 1589999999999998877 4777777665443321111000
Q ss_pred CCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeE
Q 046506 163 SRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFE 208 (310)
Q Consensus 163 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~ 208 (310)
+....+...|..+ .+...+..++++..+++..+.+.|++.|.+.
T Consensus 231 g~~~~~~~a~l~~--~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~ 274 (390)
T PRK08064 231 GAVLGVQDCWLVL--RGLKTLHVRLEHSSETANKIALYLQEHPKVQ 274 (390)
T ss_pred CCCCCHHHHHHHH--cccCcHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 0011222334333 3555678899999999999999999888763
No 95
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.69 E-value=8.4e-16 Score=141.62 Aligned_cols=157 Identities=15% Similarity=0.196 Sum_probs=113.0
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccccc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAG 85 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~ 85 (310)
.|+. +++++. .|+++++++|+++ +.+|++++++|++|.+.|+++|+++||++|++++||++|+.
T Consensus 109 ~G~~---v~~vd~-------~d~~~le~~i~~~------tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~ 172 (378)
T TIGR01329 109 SGVV---VVHVDT-------TDLDKVKAALGPK------TKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMS 172 (378)
T ss_pred cCcE---EEEeCC-------CCHHHHHHhcCcC------ceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcc
Confidence 4555 666655 2689999999754 45899999999999999999999999999999999999976
Q ss_pred ccccChhhhhhhcCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccC
Q 046506 86 SACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLS 163 (310)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 163 (310)
+....+. .. ++|++++|+||++++|.+ .|+++++++....+.... ... .|
T Consensus 173 ~~~~~~l------~~-g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~----~~~-----------------~G 224 (378)
T TIGR01329 173 PLLCNPL------EL-GADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFL----QNS-----------------TG 224 (378)
T ss_pred cccCChh------hc-CCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHH----HHh-----------------cC
Confidence 6432221 11 589999999999999877 888888776543322111 000 01
Q ss_pred CCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeE
Q 046506 164 RRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFE 208 (310)
Q Consensus 164 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~ 208 (310)
........|.. ..+...+..++++..+++..+.+.|++.|.+.
T Consensus 225 ~~~~~~~a~l~--~~~l~tl~~R~e~~~~na~~la~~L~~~~~v~ 267 (378)
T TIGR01329 225 SGLAPFDCWLL--LRGIKTLAIRIEKQQENARAIAMFLSTHPRVK 267 (378)
T ss_pred CcCCHHHHHHH--HccCCCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 01112222322 33556788999999999999999999888773
No 96
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.69 E-value=4.2e-15 Score=135.99 Aligned_cols=223 Identities=10% Similarity=0.021 Sum_probs=140.1
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhh-hhhcCC--CC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFR-HFIDGV--EG 102 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~-~~~~~~--~~ 102 (310)
+|+++|++.+++.+. ..+.++++.+..+++|.+.|+++|.++|+++|+++++|++|+.+.+...... ....++ ..
T Consensus 130 ~d~~~l~~~~~~~~~--~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 207 (360)
T TIGR00858 130 NDVEHLERLLEKNRG--ERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEP 207 (360)
T ss_pred CCHHHHHHHHHHccc--CCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccC
Confidence 578999999975421 1245777777888999999999999999999999999999975543221000 001111 24
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC-cchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~ 181 (310)
.|++..+++|+++.+ | |+++. ++............+. ..++.. +..+++.++++.+.
T Consensus 208 ~~i~i~s~sK~~~~~-g-G~~~~-~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~a~~~al~~~~-- 265 (360)
T TIGR00858 208 VDIQVGTLSKALGSY-G-AYVAG-SQALIDYLINRARTLI-----------------FSTALPPAVAAAALAALELIQ-- 265 (360)
T ss_pred CcEEEEechhhhhcc-C-cEEEc-CHHHHHHHHHhCccce-----------------ecCCCCHHHHHHHHHHHHHHh--
Confidence 688999999998764 4 65544 4444322211111111 111111 12233344454332
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcC
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASG 261 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 261 (310)
..+++.++..++.+++.+.|.++ ++++. ++..+++.+.+... ....++.+.|.++|
T Consensus 266 ~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~----------------------~~~~~~~~~l~~~g 321 (360)
T TIGR00858 266 EEPWRREKLLALIARLRAGLEAL-GFTLM-PSCTPIVPVIIGDN----------------------ASALALAEELQQQG 321 (360)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHc-CCccC-CCCCCEEEEEeCCH----------------------HHHHHHHHHHHHCC
Confidence 23567888999999999999886 67665 45666776666431 11246777787776
Q ss_pred cEEEEEe-E---ECCEeEEEEEccCCCCCHHHHHHHHHHHH
Q 046506 262 KAYMTHA-V---LGGIYAIRFAAGATLTEERHVMVAWTVVQ 298 (310)
Q Consensus 262 ~~~~~~~-~---~~~~~~iRis~~~~~~t~edi~~li~~l~ 298 (310)
. ++.+. . ..+...+|+|++ .+++++|++.++++|+
T Consensus 322 I-~v~~~~~~~~~~~~~~iRis~~-~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 322 I-FVGAIRPPTVPAGTSRLRLTLS-AAHTPGDIDRLAEALK 360 (360)
T ss_pred e-eEeeeCCCCCCCCCceEEEEEc-CCCCHHHHHHHHHhhC
Confidence 4 44331 1 123468999966 5789999999999874
No 97
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.69 E-value=3.8e-15 Score=138.27 Aligned_cols=250 Identities=15% Similarity=0.082 Sum_probs=153.6
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|+. ++.+|.++++.+.+|++++++++++. +.++++++.+|.+|.+.+ +++|+++|++||+++++
T Consensus 132 ~~~~g~~---~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~ 202 (393)
T PRK05764 132 VKLAGGV---PVFVPTGEENGFKLTVEQLEAAITPK------TKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLS 202 (393)
T ss_pred HHHcCCE---EEEEecCcccCCcCCHHHHHHhhCcc------ceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEE
Confidence 4456776 99999986555789999999998653 347778888999999865 88899999999999999
Q ss_pred ecccccccccChh---hhhhhcCCCCCCeeeeeccccccccc-ceEEEEEeCchhHHhhhccCCccccccccccccccCC
Q 046506 80 DAAYAGSACICPE---FRHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDY 155 (310)
Q Consensus 80 D~a~~~~~~~~~~---~~~~~~~~~~~D~~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 155 (310)
|.+++........ ......+...-+++..+..|+++.|. .+|+++ .++..+.........+..
T Consensus 203 De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~-~~~~~~~~~~~~~~~~~~------------ 269 (393)
T PRK05764 203 DEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAA-GPKELIKAMSKLQSHSTS------------ 269 (393)
T ss_pred eccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEe-cCHHHHHHHHHHHhhccc------------
Confidence 9998654332111 11111122235677788999987552 267666 444443322111100000
Q ss_pred CCceeccCCCcchHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhh
Q 046506 156 KDWQITLSRRFRSLKLWFVLRNY--GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKT 233 (310)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~ 233 (310)
....+..+++.+.+ ..+.+++..++..++.+.+.+.|++++++.+..+.....+.+.+.+...
T Consensus 270 ---------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~~~~~~~~~~~------ 334 (393)
T PRK05764 270 ---------NPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAFYVFPNVSKLLG------ 334 (393)
T ss_pred ---------CCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcceEEEEecccccc------
Confidence 01122233333333 2355667777888889999999998888887643333344444443100
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHh-cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 234 KYENSLLSEEERINEFNRELLESINA-SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
.. ..-..++.+.+.+ .|....++......+++|+|+. .++++++.++++|.+++..
T Consensus 335 --------~~---~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~---~~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 335 --------KS---ITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYA---TSLEDLEEGLERIERFLES 391 (393)
T ss_pred --------cc---cCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEec---CCHHHHHHHHHHHHHHHHh
Confidence 00 0001355566554 4544333333333578999965 3589999999999988764
No 98
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.68 E-value=2.2e-15 Score=140.66 Aligned_cols=181 Identities=14% Similarity=0.159 Sum_probs=114.8
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
..|+. +++++ ++ .|+++++++|++++ .+|++.+.+|.+|.+.||++|+++||++|++++||++|+
T Consensus 131 ~~Gi~---v~~vd-~~-----~d~e~l~~~l~~~t------k~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a 195 (437)
T PRK05613 131 RLGIE---VTFVE-NP-----DDPESWQAAVQPNT------KAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIA 195 (437)
T ss_pred hcCeE---EEEEC-CC-----CCHHHHHHhCCccC------eEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCc
Confidence 35665 77777 32 27899999998764 367778888999999999999999999999999999997
Q ss_pred cccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchh-HHhh---hccCCccccccccc-cccccCCC--
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSD-LVNS---LSTNPEYLKNKATE-SKQVVDYK-- 156 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~-~~~~---~~~~~~y~~~~~~~-~~~~~~~~-- 156 (310)
.+....+. . .++|++++|+||+++++ .+.|++++.+... .... ....+......... .....+..
T Consensus 196 ~g~~~~p~----~---~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (437)
T PRK05613 196 TAALVRPL----E---LGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAP 268 (437)
T ss_pred cccccChH----H---hCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchH
Confidence 66543221 1 25999999999999876 3456666643321 0000 00000000000000 00000000
Q ss_pred --------CceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEE
Q 046506 157 --------DWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEV 209 (310)
Q Consensus 157 --------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v 209 (310)
.+....|-...+..+|..+ .|...+..++++.+++|..+.+.|++.|++.-
T Consensus 269 ~~~~~~~~~~~~~~G~~~~p~~a~l~~--rgl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~ 327 (437)
T PRK05613 269 AFGLKARAGLLRDTGATLSPFNAWVTA--QGLDTLSLRLERHNENAIKVAEFLNNHEKVAK 327 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHH--cccCcHHHHHHHHHHHHHHHHHHHHcCCCcce
Confidence 0011112223344555444 46788999999999999999999999998853
No 99
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.68 E-value=2.2e-15 Score=134.45 Aligned_cols=261 Identities=17% Similarity=0.161 Sum_probs=163.2
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCccccc-CChHHHHHHHHHhCcEEEee
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAV-DTLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~-~pl~~I~~l~~~~g~~l~vD 80 (310)
+|++.|.. |+.|+++++| .+|+++|++++.+++. .+ +.+..|..|.. .+|.+|+++.|++|..|+.|
T Consensus 173 SAam~G~~---VV~V~~~~~G--~VDlddLk~k~~~~~A------al-MiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~D 240 (496)
T COG1003 173 SAAMAGFK---VVVVKCDENG--NVDLDDLRAKAEDNLA------AL-MITNPSTLGVFEEDIREICEIVHEAGGQVYYD 240 (496)
T ss_pred hHhhcCce---EEEEecCCCC--CccHHHHHHHhcccee------EE-EeccCcccccchhhHHHHHHHHHHcCCEEEec
Confidence 57899998 9999999865 9999999999986642 34 44455557875 56999999999999999999
Q ss_pred cccccccccChhhhhhhcCCCCCCeeeeecccccccccceE-----EEEEeCchhHHhhhccCCccccccccccccccCC
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCC-----CLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDY 155 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g-----~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 155 (310)
||- ..++.... + .+.-++|++-++.||+|+.|-|.| -+.|+.. +..+++....| .....+....+.
T Consensus 241 GAN-lNA~vG~~-r---PGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~--L~pfLP~p~~~--~~~~~y~~~~~~ 311 (496)
T COG1003 241 GAN-LNAIVGLA-R---PGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAH--LAPFLPGPVVY--HDVGEYRLDYDG 311 (496)
T ss_pred Ccc-hhhhhccc-c---ccccccceEEeecccccccCCCCCCCCCCceehHhh--ccccCCCCccc--CCCccccccCCC
Confidence 996 22222211 0 122369999999999999876554 4555422 32332221001 011000000000
Q ss_pred CCceeccCCC-c---ch-HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC---ceEEEEEEcCCcc
Q 046506 156 KDWQITLSRR-F---RS-LKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH---FAVVCFRVSPSAV 227 (310)
Q Consensus 156 ~~~~~~~~~~-~---~~-~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~---~~~v~~~~~~~~~ 227 (310)
. ..+.-+.. + .. .-.|+.+..+|.+|+++.-+...-+|.|++.+|+. .++++-.+. ..-+.+...+..
T Consensus 312 ~-~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~--~y~~~y~~~~~~~HE~ild~r~l~- 387 (496)
T COG1003 312 K-KSIGVSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKG--YYPVPYTGENRVAHECILDARPLK- 387 (496)
T ss_pred C-ccceeeccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh--cCccccCCCCcceeEEEeechHhH-
Confidence 0 11111111 1 22 34688899999999999999999999999999986 566532222 333333333210
Q ss_pred hhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 228 MDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
....-...++.++|...|. +.....+. -.+.+=|-++- --+.+++|++++++.++..+..
T Consensus 388 ----------------~~~Gv~~~DvAKrLlD~Gf-HaPT~~FPliV~~tLMIEPTE-sEsk~eLDrf~dami~I~~Ea~ 449 (496)
T COG1003 388 ----------------KETGVRALDVAKRLLDYGF-HAPTMYFPLIVAGTLMIEPTE-SESKEELDRFIDAMIAIREEAD 449 (496)
T ss_pred ----------------hhcCCcHHHHHHHHHhcCC-CCCcccCccccccceeecCCC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 0112223688999999884 32221121 24555555553 3567999999999999987754
No 100
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.68 E-value=2.1e-15 Score=151.12 Aligned_cols=210 Identities=12% Similarity=0.028 Sum_probs=143.1
Q ss_pred EEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeeeeeccccc-----ccccceE
Q 046506 47 FLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWF-----FTTLDCC 121 (310)
Q Consensus 47 ~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l-----~~p~g~g 121 (310)
..++++.++.+|.+.|+++|+++||++|++++| +|+..+........ .+ +||+++.++|||+ ++|. +|
T Consensus 236 ~~vlvq~P~~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pg----e~-GADi~vgsgqKwg~P~G~GGP~-aG 308 (993)
T PLN02414 236 CGVLVQYPATDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLKPPG----EW-GADIVVGSAQRFGVPMGYGGPH-AA 308 (993)
T ss_pred EEEEEecCCCCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHh----hc-cCcEEEECCCccccCCCCCCCC-ee
Confidence 344577888899999999999999999999999 88887776663211 22 6999999999998 4444 89
Q ss_pred EEEEeCchhHHhhhccCCccccccccccccccCCC---Cce-----eccCCC-c-chHHHHHHH-----HHhCHHHHHHH
Q 046506 122 CLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK---DWQ-----ITLSRR-F-RSLKLWFVL-----RNYGVANLRHF 186 (310)
Q Consensus 122 ~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~---~~~-----~~~~~~-~-~~~~~~~~l-----~~~~~~~~~~~ 186 (310)
+++++++. .+. .|+.+-+.+.+..+.+.+. ... ++.+.+ . ...++++++ ..+|..|++++
T Consensus 309 flavr~~~--~r~---~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~I 383 (993)
T PLN02414 309 FLATSQEY--KRL---MPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 383 (993)
T ss_pred EEEECHHH--Hhh---CCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHH
Confidence 99998763 232 2322222222211111110 011 111111 1 112333333 34578899999
Q ss_pred HHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEE
Q 046506 187 LRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMT 266 (310)
Q Consensus 187 ~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~ 266 (310)
.+++..++.+++++|.+ .|+++..++.+++++|.+... .++.++|.++|. .+.
T Consensus 384 a~ri~~la~~l~~~L~~-~G~~~~~~~~f~~vt~~~~~~-------------------------~~v~~~L~~~gI-~l~ 436 (993)
T PLN02414 384 AQRVHGLAGVFAAGLKK-LGFQVQSLPFFDTVKVKCSDA-------------------------DAIADAAAKVGI-NLR 436 (993)
T ss_pred HHHHHHHHHHHHHHHhh-cCCccCCCCCcCeEEEecCCH-------------------------HHHHHHHHHCCC-eeE
Confidence 99999999999999987 489988777788898887421 467778878875 322
Q ss_pred EeEECCEeEEEEEccCCCCCHHHHHHHHHHHHH
Q 046506 267 HAVLGGIYAIRFAAGATLTEERHVMVAWTVVQE 299 (310)
Q Consensus 267 ~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~ 299 (310)
.. ..+.+|+|++ .+||++|||+|+++|..
T Consensus 437 ~~---~~~~lrvs~~-e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 437 VV---DANTVTVSFD-ETTTLEDVDKLFKVFAG 465 (993)
T ss_pred Ee---cCCeEEEEee-ccCCHHHHHHHHHHHcc
Confidence 11 1346999966 78999999999999974
No 101
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.68 E-value=3e-15 Score=139.89 Aligned_cols=180 Identities=15% Similarity=0.143 Sum_probs=114.7
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccccc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAG 85 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~ 85 (310)
.|+. +++++++ |+++|+++|++++ .+|++++.+|++|.+.|+++|+++||++|++++||++|+.
T Consensus 127 ~Gi~---v~~vd~~-------d~~~l~~~i~~~T------klV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~ 190 (433)
T PRK08134 127 FGIE---TTFVKPG-------DIDGWRAAIRPNT------RLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTT 190 (433)
T ss_pred CCeE---EEEECCC-------CHHHHHHhcCCCC------eEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcc
Confidence 4555 6677653 6899999998764 4888999999999999999999999999999999999987
Q ss_pred ccccChhhhhhhcCCCCCCeeeeecccccccccc-eEEEEEeCchh-HHh--hh-ccCCccccccccccccccCCCCc--
Q 046506 86 SACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD-CCCLWVKDPSD-LVN--SL-STNPEYLKNKATESKQVVDYKDW-- 158 (310)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-~g~l~v~~~~~-~~~--~~-~~~~~y~~~~~~~~~~~~~~~~~-- 158 (310)
+....+. . .++|++++|+|||++++.. .|.+++..... +.. .+ ...+++....+...........+
T Consensus 191 ~~~~~pl------~-~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 263 (433)
T PRK08134 191 PYLLRPF------E-HGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLL 263 (433)
T ss_pred cccCCch------h-cCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHH
Confidence 7654331 1 2699999999999987643 55665542210 000 00 00111111100000000000000
Q ss_pred ------eeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEe
Q 046506 159 ------QITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVV 210 (310)
Q Consensus 159 ------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~ 210 (310)
....+.......+|.. ..|...+..++++..+++..+.+.|+++|.+.-+
T Consensus 264 ~~~~~~~~~~G~~ls~~~A~l~--~~gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V 319 (433)
T PRK08134 264 RARREGLRDFGACLSPMNAWQL--LQGIETLPLRMERHVANTRKVVAFLASHPAVARV 319 (433)
T ss_pred HHHHHHHHhcCCCCCHHHHHHH--hcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 0011111233344433 3466789999999999999999999999988543
No 102
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.68 E-value=1.9e-15 Score=140.24 Aligned_cols=244 Identities=14% Similarity=0.151 Sum_probs=149.7
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|+. ++.+|+++++++.+|++++++++++. +.++++++++|++|.+.| +++|+++|+++++++++
T Consensus 134 ~~~~g~~---~~~v~~~~~~~~~~d~~~l~~~i~~~------~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~ 204 (391)
T PRK08361 134 AKIAEAK---PIRIPLREENEFQPDPDELLELITKR------TRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILS 204 (391)
T ss_pred HHHcCCE---EEEEecCCccCCCCCHHHHHHhcccc------cEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEE
Confidence 4456776 99999987555689999999999764 347778888999999999 88999999999999999
Q ss_pred ecccccccccChhhhhhhcCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 80 DAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
|++++...................++++.|.+|.++.| | +|+++.. +..+....... .+....
T Consensus 205 De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~-GlRiG~~~~~-~~~~~~~~~~~-~~~~~~------------ 269 (391)
T PRK08361 205 DEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMT-GWRLGFVIAP-EQVIKDMIKLH-AYIIGN------------ 269 (391)
T ss_pred EcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCc-HhhhhhhccC-HHHHHHHHHHH-hhhccC------------
Confidence 99986544322111111111112467889999998765 5 7887764 43443321111 111000
Q ss_pred ceeccCCCcchHHHHHHHHHhC--H--HHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceE-EEEEEcCCcchhhhh
Q 046506 158 WQITLSRRFRSLKLWFVLRNYG--V--ANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAV-VCFRVSPSAVMDKLK 232 (310)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~--~--~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~-v~~~~~~~~~~~~~~ 232 (310)
...+...++...+. . ..+++..++..++.+.+.+.|++++++.+. +|+.+. +...+.+...
T Consensus 270 --------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~-~p~g~~~~~~~l~~~~~----- 335 (391)
T PRK08361 270 --------VASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVF-EPKGAFYVFANIDETGM----- 335 (391)
T ss_pred --------CChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeec-CCCEEEEEEEECCCCCC-----
Confidence 01111122222221 1 346677777788888899999888888765 445443 4344542110
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHh-cCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 233 TKYENSLLSEEERINEFNRELLESINA-SGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+ ..++.+.+.+ .|.....+.... +.+++|+++.. ++++++..++.|++.+++
T Consensus 336 ---------~-------~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~---~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 336 ---------S-------SEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYAT---SKEKLIEAMERMEKALEE 390 (391)
T ss_pred ---------C-------HHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecC---CHHHHHHHHHHHHHHHhc
Confidence 0 1345555654 454333322222 35789999662 567888888888776643
No 103
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.68 E-value=4.2e-15 Score=136.96 Aligned_cols=163 Identities=17% Similarity=0.213 Sum_probs=117.0
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCe
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADS 105 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~ 105 (310)
.|+++++++|+++ +.+|.+.+++|++|.+.|+++|+++|+++|++++||.+++.+....+. . .++|+
T Consensus 126 ~d~e~l~~~i~~~------tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~pl------~-~GaDi 192 (388)
T PRK08861 126 SDAAALDAALAKK------PKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQKPL------E-LGADF 192 (388)
T ss_pred CCHHHHHHhcCcC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccCCCc------c-cCCCE
Confidence 5789999998764 458888999999999999999999999999999999999766443221 1 26999
Q ss_pred eeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHH
Q 046506 106 FSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANL 183 (310)
Q Consensus 106 ~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 183 (310)
++.|+|||+++|.+ .|++..++++..++..... .++ |........|..+ .|...+
T Consensus 193 vv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~-~~~--------------------G~~~~p~~a~l~~--rgl~Tl 249 (388)
T PRK08861 193 VIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWG-NCI--------------------GATGTPFDSYMTL--RGIRTL 249 (388)
T ss_pred EEeecceeccCCCcceeEEEEecHHHHHHHHHHHH-hcc--------------------CCCCChHHHHHHH--hcCCCH
Confidence 99999999999865 4555555554332221110 011 1112334455444 467889
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCeEEec-C-----C-----------CceEEEEEEcC
Q 046506 184 RHFLRSHVNMAKLFERLVGSDKRFEVVF-P-----R-----------HFAVVCFRVSP 224 (310)
Q Consensus 184 ~~~~~~~~~~a~~l~~~L~~~~~~~v~~-~-----~-----------~~~~v~~~~~~ 224 (310)
.-++++.+++|..+.+.|++.|.+.-+. | | ..++++|.+.+
T Consensus 250 ~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~ 307 (388)
T PRK08861 250 GARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAG 307 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCC
Confidence 9999999999999999999999885332 2 1 24588898864
No 104
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.68 E-value=1.1e-14 Score=134.81 Aligned_cols=230 Identities=10% Similarity=0.008 Sum_probs=143.7
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhh--hhhhcCCCC
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEF--RHFIDGVEG 102 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~--~~~~~~~~~ 102 (310)
.+|++++++.|.+... .++.++++.+..+.+|.+.|+++|+++|++||+++++|++|+.+.+..... .....--.+
T Consensus 146 ~~d~~~l~~~l~~~~~--~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 223 (385)
T TIGR01825 146 HADMDDLDRVLRENPS--YGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDK 223 (385)
T ss_pred CCCHHHHHHHHHhhcc--CCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcC
Confidence 5889999999876432 124577778888999999999999999999999999999997654431110 000000124
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
.|++..+.+|+++.+. |+++ .++..++........|..... +.+....++.++++.+..
T Consensus 224 ~~i~~~s~sK~~~~~g--G~~~-~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~a~~~al~~~~~-- 282 (385)
T TIGR01825 224 VDIQVGTLSKAIGVVG--GYAA-GHKELIEYLKNRARPFLFSTA----------------QPPAVVAALAAAVDELQR-- 282 (385)
T ss_pred CcEEEEeccHHhhcCC--CEEe-cCHHHHHHHHHhCccccccCC----------------CCHHHHHHHHHHHHHHhc--
Confidence 7888999999997543 5554 444443322111111211100 001122344445543311
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCc
Q 046506 183 LRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGK 262 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 262 (310)
..+..++..++.+++.+.|.++ ++++. .+..+++.+.+.+. ....++.+.|.++|.
T Consensus 283 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~----------------------~~~~~~~~~L~~~gi 338 (385)
T TIGR01825 283 SPELMERLWDNTRFFKAGLGKL-GYDTG-GSETPITPVVIGDE----------------------KAAQEFSRRLFDEGI 338 (385)
T ss_pred CHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEECCH----------------------HHHHHHHHHHHHCCc
Confidence 2346677778899999999886 77765 34455665554321 112467777877765
Q ss_pred EEEEEeEE----CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 263 AYMTHAVL----GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 263 ~~~~~~~~----~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
.+.+..+ .+...+|++++ .+++++|+++++++|+++++.
T Consensus 339 -~v~~~~~~~~~~~~~~iRi~~~-~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 339 -FAQSIVFPTVPRGTARIRNIPT-AEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred -EEcccCCCCCCCCCceEEEEEc-CCCCHHHHHHHHHHHHHHHHH
Confidence 4432211 24478999955 679999999999999998754
No 105
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.67 E-value=5.1e-15 Score=136.81 Aligned_cols=262 Identities=14% Similarity=0.120 Sum_probs=150.0
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+...|+. +++++++++ ++.+|+++++++|++.... .+.+|+.++ .+|...|+++|+++|++||+++++|++
T Consensus 86 ~~~~G~~---~~~~~~~~~-~~~~d~~~l~~~i~~~~~~--~t~~v~~~~---~~G~~~~~~~i~~l~~~~~~~lI~D~a 156 (380)
T TIGR03588 86 ALYCGAK---VDFVDIDPD-TGNIDEDALEKKLAAAKGK--LPKAIVPVD---FAGKSVDMQAIAALAKKHGLKIIEDAS 156 (380)
T ss_pred HHHcCCE---EEEEecCCC-cCCcCHHHHHHHhhcccCC--CceEEEEeC---CCCccCCHHHHHHHHHHcCCEEEEECC
Confidence 3456776 999999864 4689999999999732000 133555443 479999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecc--cccccccceEEEEEeCchhHHhhhccC-CccccccccccccccCCCCce
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAH--KWFFTTLDCCCLWVKDPSDLVNSLSTN-PEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~h--K~l~~p~g~g~l~v~~~~~~~~~~~~~-~~y~~~~~~~~~~~~~~~~~~ 159 (310)
|+.+.. .+. .. .......|+.++|+| |++..+ ..|+++..++....+..... ........ ....+....+.
T Consensus 157 ~a~g~~-~~~-~~-~g~~~~~d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~ 230 (380)
T TIGR03588 157 HALGAE-YGG-KP-VGNCRYADATVFSFHPVKIITTA-EGGAVTTNDEELAERMRLLRSHGITKDPL--LFEKQDEGPWY 230 (380)
T ss_pred CcccCc-cCC-Ee-CCCccccceEEEecCCCCccccc-CceEEEECCHHHHHHHHHHHHCCCCCCcc--cccccccCcce
Confidence 987754 221 11 111113599999988 898766 44555556664433221100 00000000 00000000001
Q ss_pred ec---cCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC-----ceEEEEEEcCCcchhhh
Q 046506 160 IT---LSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH-----FAVVCFRVSPSAVMDKL 231 (310)
Q Consensus 160 ~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~-----~~~v~~~~~~~~~~~~~ 231 (310)
++ .|..+..-.+.+++.......++++.++..++++++.+.|.++|++.+..++. .....+.+....
T Consensus 231 ~~~~~~g~n~~m~~l~aa~g~~qL~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----- 305 (380)
T TIGR03588 231 YEQQELGFNYRMTDIQAALGLSQLKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEF----- 305 (380)
T ss_pred eeeeccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcC-----
Confidence 11 11112222222333222345688999999999999999999998877554321 112223332210
Q ss_pred hhhhccccchhHHHHHHHHHHHHHHHHhcCcEEE---EEeE--------EC----------CEeEEEEEccCCCCCHHHH
Q 046506 232 KTKYENSLLSEEERINEFNRELLESINASGKAYM---THAV--------LG----------GIYAIRFAAGATLTEERHV 290 (310)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~--------~~----------~~~~iRis~~~~~~t~edi 290 (310)
.....++.+.|.++|+... .+.. .. ....+++. .++..|++||
T Consensus 306 ---------------~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP-~~~~l~~~dv 369 (380)
T TIGR03588 306 ---------------GCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLP-LHPALTLEQQ 369 (380)
T ss_pred ---------------CCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcC-CCCCCCHHHH
Confidence 0011456666766664211 1100 00 12578888 4578899999
Q ss_pred HHHHHHHHHH
Q 046506 291 MVAWTVVQEH 300 (310)
Q Consensus 291 ~~li~~l~~~ 300 (310)
++++++|+++
T Consensus 370 ~~i~~~l~~~ 379 (380)
T TIGR03588 370 QRVVETLRKV 379 (380)
T ss_pred HHHHHHHHHh
Confidence 9999999876
No 106
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.66 E-value=5.5e-15 Score=137.10 Aligned_cols=164 Identities=17% Similarity=0.234 Sum_probs=116.1
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCe
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADS 105 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~ 105 (310)
+|+++++++|+++ +.+|++.+++|++|.+.|+++|+++|+++|++++||++|+.+....+. .. ++|+
T Consensus 138 ~d~e~l~~ai~~~------tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~~~~------~~-gaDi 204 (398)
T PRK07504 138 LDLDNWEKAVRPN------TKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQKPL------EL-GAHI 204 (398)
T ss_pred CCHHHHHHhcCcC------ceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccCCch------hh-CCCE
Confidence 7899999999765 348999999999999999999999999999999999999765432221 11 5899
Q ss_pred eeeeccccccccc-ceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHH
Q 046506 106 FSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLR 184 (310)
Q Consensus 106 ~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 184 (310)
++.|+||+++++. ..|++++.+++.+.+.+. .+.. ..+.......+|.+++ +...+.
T Consensus 205 vv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~---~~~~-----------------~~g~~~s~~~A~~~l~--~L~tl~ 262 (398)
T PRK07504 205 VVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQ---DYFR-----------------HTGPSLSPFNAWTLLK--GLETLP 262 (398)
T ss_pred EEeeccccccCCccceEEEEEeCcHHHHHHHH---HHHH-----------------HhCCCCCHHHHHHHHh--ccchHH
Confidence 9999999998764 345455555544432111 0110 0111123344444443 557789
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCeEEec-C-----C-----------CceEEEEEEcC
Q 046506 185 HFLRSHVNMAKLFERLVGSDKRFEVVF-P-----R-----------HFAVVCFRVSP 224 (310)
Q Consensus 185 ~~~~~~~~~a~~l~~~L~~~~~~~v~~-~-----~-----------~~~~v~~~~~~ 224 (310)
.++++.+++++.+.+.|++.|++.-+. | | ..++++|.+.+
T Consensus 263 ~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 319 (398)
T PRK07504 263 VRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKG 319 (398)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCC
Confidence 999999999999999999999885322 1 2 15689998864
No 107
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.66 E-value=6.8e-15 Score=136.17 Aligned_cols=164 Identities=18% Similarity=0.239 Sum_probs=113.8
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCee
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSF 106 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~ 106 (310)
|+++++++|++. +.+|++.+++|++|.+.|+++|+++|+++|++++||++++.+....+ . . .++|++
T Consensus 133 d~e~l~~~i~~~------tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~~-----~-~-~g~Div 199 (391)
T TIGR01328 133 IPEEVKAHIKDN------TKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTNP-----V-A-LGVDVV 199 (391)
T ss_pred CHHHHHHhhccC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCCc-----h-h-cCCCEE
Confidence 688999998764 34888889999999999999999999999999999999976543221 1 1 269999
Q ss_pred eeecccccccccce-EEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHH
Q 046506 107 SLNAHKWFFTTLDC-CCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRH 185 (310)
Q Consensus 107 ~~~~hK~l~~p~g~-g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 185 (310)
+.|++|+++++.+. |.+++.+++.+.+......... .+.......+|.+++ +.+.+..
T Consensus 200 v~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~-------------------~g~~l~~~~a~l~l~--~L~tl~~ 258 (391)
T TIGR01328 200 VHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDM-------------------TGSVISPFDAWLILR--GLKTLNI 258 (391)
T ss_pred EccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhC-------------------CCCCCCcHHHHHHHh--CcCcHHH
Confidence 99999999987652 3444556654433321110000 011122333444443 4456778
Q ss_pred HHHHHHHHHHHHHHHHcCCCCeEEecCC-----------------CceEEEEEEcC
Q 046506 186 FLRSHVNMAKLFERLVGSDKRFEVVFPR-----------------HFAVVCFRVSP 224 (310)
Q Consensus 186 ~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------------~~~~v~~~~~~ 224 (310)
++++..++++++.+.|++.|++..+.-| ..++++|.+.+
T Consensus 259 r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~ 314 (391)
T TIGR01328 259 RMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKG 314 (391)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCC
Confidence 8999999999999999999988644221 14588898864
No 108
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.66 E-value=1.5e-14 Score=136.13 Aligned_cols=260 Identities=15% Similarity=0.105 Sum_probs=150.0
Q ss_pred ecCCCCCCEEEEecCCC------CC--cccCHHHHHHHHHHHHHcCCCcEEEEEeccCCccc-cc---CChHHHHHHHHH
Q 046506 5 IVGIDVKNFRAIKTTKS------SS--YGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAIT-AV---DTLKPLCDVAKQ 72 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~------~~--~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G-~~---~pl~~I~~l~~~ 72 (310)
+.|.. ++.+++++. .. +.+|+++|+++|++.+.. ++.+|++++.+|.+| .+ .++++|+++|++
T Consensus 135 ~~G~~---~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~--~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~ 209 (460)
T PRK13238 135 LNGAT---AVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAE--NVPFIVMTITNNSAGGQPVSMANLRAVYEIAKK 209 (460)
T ss_pred HcCCE---EEEEeccccccccccccccCCcCHHHHHHHHhhcCCC--ceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 34555 888888641 12 359999999999863211 245888888888887 44 447899999999
Q ss_pred hCcEEEeecccccc-cccCh----hhhh-----hh-cCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCcc
Q 046506 73 FGIWVHVDAAYAGS-ACICP----EFRH-----FI-DGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEY 141 (310)
Q Consensus 73 ~g~~l~vD~a~~~~-~~~~~----~~~~-----~~-~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y 141 (310)
||+++++|+||... .+... .+.. .. .-...+|++++|+||.+++|.| |+++.++++.+.+.-.....+
T Consensus 210 ~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G-G~i~~~d~~l~~~~~~~~~~~ 288 (460)
T PRK13238 210 YGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG-GLLCFRDEDLFTECRTLCILY 288 (460)
T ss_pred cCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-eEEEcChHHHHHHhhhccccc
Confidence 99999999998542 21111 0110 00 0013589999999999999885 777777655544331111000
Q ss_pred ccccccccccccCCCCceeccCCCcc-hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEE
Q 046506 142 LKNKATESKQVVDYKDWQITLSRRFR-SLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCF 220 (310)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~ 220 (310)
.. +...++.... ..++..+++..-.+ ...++..+..++|.+.|.+. |+++..+.....+..
T Consensus 289 --~g------------~~t~~g~~~~~~~Ala~~l~e~~~~---~~~~~~~~~~~~l~~~L~~~-G~~~~~p~Gg~~v~~ 350 (460)
T PRK13238 289 --EG------------FPTYGGLAGRDMEALAVGLYEGMDE---DYLAYRIGQVEYLGEGLEEA-GVPIQTPAGGHAVFV 350 (460)
T ss_pred --CC------------cccccCcHHHHHHHHHhhHHHhhCh---HHHHHHHHHHHHHHHHHHHC-CCCeEccCCceEEEE
Confidence 00 0001111111 22233333321111 22333334568899999886 899886666655555
Q ss_pred EEcCCcchhhhhhhhccccchhHHHHHHH-HHHHHHHHHhcCcEEE-EEeE-E------CC------EeEEEEEccCCCC
Q 046506 221 RVSPSAVMDKLKTKYENSLLSEEERINEF-NRELLESINASGKAYM-THAV-L------GG------IYAIRFAAGATLT 285 (310)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~g~~~~-~~~~-~------~~------~~~iRis~~~~~~ 285 (310)
.+..... . .+. ..+ ..++..+|.++..+.. .... + .+ ...+|+++...--
T Consensus 351 d~~~~~~-----~-------~~~---~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~ 415 (460)
T PRK13238 351 DAGKFLP-----H-------IPA---EQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVY 415 (460)
T ss_pred EchhcCC-----C-------CCC---CCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccC
Confidence 5432100 0 000 000 1345555554443333 3221 1 12 4799999876556
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 046506 286 EERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 286 t~edi~~li~~l~~~~~~ 303 (310)
|.+++|.+.++|+++.+.
T Consensus 416 ~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 416 TQSHMDYVAEALKAVKEN 433 (460)
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 899999999999998754
No 109
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.66 E-value=5.9e-15 Score=135.69 Aligned_cols=172 Identities=10% Similarity=0.120 Sum_probs=123.3
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhC--cEEEeeccc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFG--IWVHVDAAY 83 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g--~~l~vD~a~ 83 (310)
+|+. +.+++. .|+++++++|++++ .+|.+++.+|++|.+.||++|+++||++| ++++||+++
T Consensus 125 ~Gi~---v~~vd~-------~d~~~l~~~l~~~T------rlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~ 188 (395)
T PRK08114 125 LGVT---TTWFDP-------LIGADIAKLIQPNT------KVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTW 188 (395)
T ss_pred cCcE---EEEECC-------CCHHHHHHhcCCCc------eEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCC
Confidence 4665 666653 35688999997653 58999999999999999999999999985 999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeeccccccccc--ceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceec
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTL--DCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~--g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
+.+.. .+... .++|+++.|+|||++++. +.|+++.+ +......... .+ .
T Consensus 189 a~p~~-~~pl~------~GaDivv~S~tKyl~Ghsdv~~G~v~~~-~~~~~~l~~~--~~-------------------~ 239 (395)
T PRK08114 189 AAGVL-FKALD------FGIDISIQAGTKYLVGHSDAMIGTAVAN-ARCWEQLREN--SY-------------------L 239 (395)
T ss_pred ccccc-cCHHH------cCCcEEEEcCcccccCCCcceeEEEEcC-HHHHHHHHHH--HH-------------------h
Confidence 88765 32211 269999999999999984 67766543 3332221100 00 0
Q ss_pred cCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeE-EecC-----C-----------CceEEEEEEcC
Q 046506 162 LSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFE-VVFP-----R-----------HFAVVCFRVSP 224 (310)
Q Consensus 162 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~-v~~~-----~-----------~~~~v~~~~~~ 224 (310)
.|.-..+...|..+ .|...+.-++++.+++|..+.+.|++.|.++ |.-| | ..++++|.+.+
T Consensus 240 ~G~~~~p~~a~l~~--rgl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~ 317 (395)
T PRK08114 240 MGQMVDADTAYMTS--RGLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKK 317 (395)
T ss_pred ccCCCCHHHHHHHH--cCCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecC
Confidence 11112344555444 4678889999999999999999999999886 4322 1 25688898864
No 110
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.66 E-value=5.7e-15 Score=136.50 Aligned_cols=245 Identities=15% Similarity=0.138 Sum_probs=150.4
Q ss_pred ceecCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEE
Q 046506 3 AQIVGIDVKNFRAIKTTKS-SSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVH 78 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~-~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~ 78 (310)
++.+|+. ++.+|.+++ +++.+|+++|++.+++. +.++++++++|.+|.+.+ +++|+++|+++|++++
T Consensus 125 ~~~~g~~---~~~v~~~~~~~~~~~d~~~l~~~~~~~------~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li 195 (382)
T PRK06108 125 PKILGAR---VVCVPLDFGGGGWTLDLDRLLAAITPR------TRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIV 195 (382)
T ss_pred HHHCCCE---EEEeeCCCCCCCccCCHHHHHHhcCcc------ceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEE
Confidence 4456776 899999753 24679999999998653 347778888999998765 6889999999999999
Q ss_pred eeccccccccc-Chhhhhhh--cCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccC
Q 046506 79 VDAAYAGSACI-CPEFRHFI--DGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVD 154 (310)
Q Consensus 79 vD~a~~~~~~~-~~~~~~~~--~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 154 (310)
+|.+++..... ........ .....-.++..|++|.++.| ..+|+++++ ++.+...... ..+...
T Consensus 196 ~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~-~~~~~~~~~~-~~~~~~---------- 263 (382)
T PRK06108 196 ADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAP-PALGQVLEKL-IEYNTS---------- 263 (382)
T ss_pred EehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCC-HHHHHHHHHH-HHhccc----------
Confidence 99998765542 11110000 01112346788999988644 457888764 3333322111 011100
Q ss_pred CCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhh
Q 046506 155 YKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~ 234 (310)
+.-......+..+++ .+.+.+++..++..++.+++.+.|.+++++.+..+.....+.+.+.+..
T Consensus 264 -------~~~~~~q~a~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~~~~-------- 327 (382)
T PRK06108 264 -------CVAQFVQRAAVAALD-EGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIPGVT-------- 327 (382)
T ss_pred -------CCChHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCCCC--------
Confidence 000111122222332 2345567888888999999999998888888764333334455554320
Q ss_pred hccccchhHHHHHHHHHHHHHHHHh-cCcEEEEEeEE--CCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESINA-SGKAYMTHAVL--GGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~--~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
+ ..++.+.+.+ .|.....+..+ .+.+++|+|+. . ++++++.+++.|++.+
T Consensus 328 -------~-------~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~-~--~~~~l~~~l~~l~~~l 380 (382)
T PRK06108 328 -------D-------SLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFA-R--DPARLDEAVERLRRFL 380 (382)
T ss_pred -------C-------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec-C--CHHHHHHHHHHHHHHH
Confidence 0 1356666654 45433333222 23579999966 3 7889999999888765
No 111
>PRK05968 hypothetical protein; Provisional
Probab=99.66 E-value=4.4e-15 Score=137.41 Aligned_cols=172 Identities=16% Similarity=0.242 Sum_probs=117.9
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccccc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAG 85 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~ 85 (310)
.|+. +++++. .|++++++++ +. +.+|++.+.++.++.+.|+++|+++|++||++++||++++.
T Consensus 126 ~G~~---v~~vd~-------~d~~~l~~~i-~~------tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~ 188 (389)
T PRK05968 126 MGVE---VDYVDG-------RDEEAVAKAL-PG------AKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWAS 188 (389)
T ss_pred cCce---EEEeCC-------CCHHHHHHhc-cc------CCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcc
Confidence 4555 666643 2779999887 32 34788888889999999999999999999999999999976
Q ss_pred ccccChhhhhhhcCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccC
Q 046506 86 SACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLS 163 (310)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 163 (310)
+....+ .. .++|+++.|+||++++|.+ .|+++ .++..+.+......++++.
T Consensus 189 ~~~~~p----~~---~g~Divv~S~tK~l~g~~~~~gG~i~-~~~~~~~~l~~~~~~~~g~------------------- 241 (389)
T PRK05968 189 PVFQRP----IT---LGVDLVIHSASKYLGGHSDTVAGVVA-GSKEHIARINAEAYPYLGA------------------- 241 (389)
T ss_pred hhccCc----hh---cCCcEEEeeccccccCCCCeEEEEEE-ECHHHHHHHHHHHHHhCCC-------------------
Confidence 543222 11 2589999999999999865 45554 5554443322111111110
Q ss_pred CCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC------------CceEEEEEEcC
Q 046506 164 RRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR------------HFAVVCFRVSP 224 (310)
Q Consensus 164 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~------------~~~~v~~~~~~ 224 (310)
.......|..+ .+...+..++++..++++++.+.|+++|++..+..| ..++++|.+.+
T Consensus 242 -~~~~~~A~~~l--~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~ 311 (389)
T PRK05968 242 -KLSPFEAWLLL--RGLRTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFRE 311 (389)
T ss_pred -CCChHHHHHHH--cccCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECC
Confidence 01123333333 345677899999999999999999999999665432 14588998874
No 112
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.66 E-value=9e-15 Score=133.39 Aligned_cols=229 Identities=12% Similarity=0.060 Sum_probs=147.8
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh--CcEEEee
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF--GIWVHVD 80 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~--g~~l~vD 80 (310)
+...|+. ++.+|.+++ +.+|++++++++.+. +.+|++++.+|++|.+.|++++.++|+.+ |+++++|
T Consensus 112 ~~~~g~~---~~~~~~~~~--~~~d~~~l~~~~~~~------~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D 180 (346)
T TIGR01141 112 AKIHGAE---VVKVPLDED--GQLDLEDILVAIDDK------PKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVD 180 (346)
T ss_pred HHHcCCe---EEEeccCCC--CCCCHHHHHHhcCCC------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEE
Confidence 3456776 899999864 579999999987543 34788888999999999999999999987 9999999
Q ss_pred cccccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCce
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 159 (310)
++|+...... ......... ..+++..|.+|+++.| ..+|+++.+ +..++........+ .
T Consensus 181 ~~y~~~~~~~-~~~~~~~~~-~~~i~~~S~sK~~g~~G~r~G~~~~~-~~~~~~~~~~~~~~----~------------- 240 (346)
T TIGR01141 181 EAYGEFSGEP-STLPLLAEY-PNLIVLRTLSKAFGLAGLRIGYAIAN-AEIIDALNKVRAPF----N------------- 240 (346)
T ss_pred CchhhhcCCc-cHHHHHhhC-CCEEEEehhhHhhhchhhhceeeecC-HHHHHHHHhccCCC----C-------------
Confidence 9987332211 111111111 1235567889999654 347888764 44443321111000 0
Q ss_pred eccCCCcchHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccc
Q 046506 160 ITLSRRFRSLKLWFVLRNYGV-ANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENS 238 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 238 (310)
.......++...+.. ..+++..++..++.+++++.|.+++++++. ++...++++.+.. +
T Consensus 241 ------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~~~~~-~------------ 300 (346)
T TIGR01141 241 ------LSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLEVY-PSDANFVLIRFPR-D------------ 300 (346)
T ss_pred ------CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEC-CCcCCEEEEecCC-C------------
Confidence 011222223333322 257778888899999999999988888865 4455666665543 1
Q ss_pred cchhHHHHHHHHHHHHHHHHhcCcEEEEEeE-ECC-EeEEEEEccCCCCCHHHHHHHHHHHH
Q 046506 239 LLSEEERINEFNRELLESINASGKAYMTHAV-LGG-IYAIRFAAGATLTEERHVMVAWTVVQ 298 (310)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~~-~~~iRis~~~~~~t~edi~~li~~l~ 298 (310)
.+++.+.|.+.|. .+.+.. ..+ .+.+|+|++ +++|+++++++|+
T Consensus 301 -----------~~~~~~~L~~~gI-~v~~g~~f~~~~~~iRls~~----~~~~i~~~~~~l~ 346 (346)
T TIGR01141 301 -----------ADALFEALLEKGI-IVRDLNSYPGLPNCLRITVG----TREENDRFLAALR 346 (346)
T ss_pred -----------HHHHHHHHHHCCe-EEEeCCCcCCCCCeEEEecC----CHHHHHHHHHHhC
Confidence 1456777777774 444332 212 578999943 6889999998873
No 113
>PLN02509 cystathionine beta-lyase
Probab=99.66 E-value=6.6e-15 Score=138.06 Aligned_cols=148 Identities=17% Similarity=0.185 Sum_probs=108.8
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCe
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADS 105 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~ 105 (310)
.|+++++++|++. +.+|++.+++|++|.+.|+++|+++|++||++++||+||+.+....+. + .++|+
T Consensus 205 ~d~e~l~~ai~~~------TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~pl------~-~gaDi 271 (464)
T PLN02509 205 TNLDEVAAAIGPQ------TKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLSRPL------E-LGADI 271 (464)
T ss_pred CCHHHHHHhCCcC------CeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccCChh------h-cCCcE
Confidence 4679999998664 348899999999999999999999999999999999999766542221 1 25999
Q ss_pred eeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHH
Q 046506 106 FSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANL 183 (310)
Q Consensus 106 ~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 183 (310)
+++|+|||++++.+ .|+++++++....+..... .. .+.......+|..+ .+.+.+
T Consensus 272 vv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~--~~-------------------~g~~l~p~~A~l~l--r~L~tL 328 (464)
T PLN02509 272 VMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQ--NS-------------------EGSGLAPFDCWLCL--RGIKTM 328 (464)
T ss_pred EEecCcccccCCCccceeEEEeccHHHHHHHHHHH--Hh-------------------cCCCcCHHHHHHHH--hhhhhH
Confidence 99999999999876 6777776664322211000 00 00112233344444 356788
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCeEE
Q 046506 184 RHFLRSHVNMAKLFERLVGSDKRFEV 209 (310)
Q Consensus 184 ~~~~~~~~~~a~~l~~~L~~~~~~~v 209 (310)
..++++..++++++.+.|++.|.++-
T Consensus 329 ~~R~~r~~~nA~~la~~L~~~p~V~~ 354 (464)
T PLN02509 329 ALRIEKQQENARKIAMYLSSHPRVKK 354 (464)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccE
Confidence 99999999999999999999998853
No 114
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.65 E-value=9e-15 Score=126.14 Aligned_cols=239 Identities=15% Similarity=0.109 Sum_probs=173.3
Q ss_pred cccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCC
Q 046506 24 YGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGA 103 (310)
Q Consensus 24 ~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 103 (310)
+.+.|+++++++++.+. +|++++++..+|...++.+|.+++|++|+++.-|=||++|.++.+.+. .++
T Consensus 152 ~~~~P~~~~~~~~dd~A------vV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~------~ga 219 (407)
T COG3844 152 GVIAPRALEEAITDDVA------VVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHA------AGA 219 (407)
T ss_pred eeeChHHHHHhhccceE------EEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeecc------cCC
Confidence 46788899999988753 899999999999999999999999999999999999999999887654 379
Q ss_pred Ceeeeeccccccc-ccceEEEEEeCchhHHhhhccCCcccccccccc---ccccCCCCceeccCCC--cchHHHHHHHHH
Q 046506 104 DSFSLNAHKWFFT-TLDCCCLWVKDPSDLVNSLSTNPEYLKNKATES---KQVVDYKDWQITLSRR--FRSLKLWFVLRN 177 (310)
Q Consensus 104 D~~~~~~hK~l~~-p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~l~~ 177 (310)
|+-+.+.||.+.+ |.+.+++|+.++.. ++..+....++....+.. -..+..+-..+.+|.. ....++-.+|..
T Consensus 220 DfaigcsyKYLNgGPGapa~l~v~~~h~-e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDi 298 (407)
T COG3844 220 DFAIGCSYKYLNGGPGAPAGLFVAPRHR-ERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDI 298 (407)
T ss_pred CeeeeeeceeccCCCCCceeEEeccccc-cccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhh
Confidence 9999999999986 78888999988743 343333334443222100 0011111112222222 112334455666
Q ss_pred hCHHHHHHHHHHHHHHHHHHHHHHcCC-C--CeEEecCC----CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHH
Q 046506 178 YGVANLRHFLRSHVNMAKLFERLVGSD-K--RFEVVFPR----HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFN 250 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~a~~l~~~L~~~-~--~~~v~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (310)
...-++.+.+++...++.++.+.++.. + ++++..|. +.+.|+|..+..
T Consensus 299 fa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~~------------------------- 353 (407)
T COG3844 299 FADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPHG------------------------- 353 (407)
T ss_pred hhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCcH-------------------------
Confidence 666678999999999999999999764 3 56777653 577888877642
Q ss_pred HHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 251 RELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 251 ~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
..+.+.|.+.|.+- ++....++||.++-.|++-+||=..+++|.+++..+
T Consensus 354 ~~V~qaLi~rGVig----D~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 354 YQVMQALIDRGVIG----DFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred HHHHHHHHHcCccc----cccCCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 35666677777532 233467899999988999999999999999998765
No 115
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.65 E-value=2.2e-14 Score=126.68 Aligned_cols=242 Identities=12% Similarity=0.074 Sum_probs=162.6
Q ss_pred CEEEEecC-CCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCccccc---CChHHHHHHHHHhCcEEEeeccccccc
Q 046506 12 NFRAIKTT-KSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAV---DTLKPLCDVAKQFGIWVHVDAAYAGSA 87 (310)
Q Consensus 12 ~v~~v~~~-~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~---~pl~~I~~l~~~~g~~l~vD~a~~~~~ 87 (310)
.++..|.. +++.|.||+++||+++.+.. +.+.+.-.+.|++|.+ ++|.+|+++|.+||+.++.|..|+--.
T Consensus 130 ~~i~~pL~~~~~~y~iD~~~LE~~~~~~~-----vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv 204 (388)
T COG1168 130 KVIENPLVEDDGRYEIDFDALEKAFVDER-----VKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLV 204 (388)
T ss_pred EEEeccccccCCcEEecHHHHHHHHhcCC-----ccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeeccccccc
Confidence 47788876 46788999999999998753 2355556677888986 568899999999999999999996555
Q ss_pred ccChhhhhhh---cCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccC
Q 046506 88 CICPEFRHFI---DGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLS 163 (310)
Q Consensus 88 ~~~~~~~~~~---~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 163 (310)
+....+-... .....--+.+.++.|+|..+ ..|+.+++.++.. +..+...-......
T Consensus 205 ~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~l-r~~~~~~l~~~~~~------------------ 265 (388)
T COG1168 205 LGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNREL-RAKFLKRLKRNGLH------------------ 265 (388)
T ss_pred ccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHH-HHHHHHHHHHhcCC------------------
Confidence 4442222111 11112345568889999975 5667777777754 22221110111111
Q ss_pred CCcchHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHHHHcC-CCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccc
Q 046506 164 RRFRSLKLWFVLRN--YGVANLRHFLRSHVNMAKLFERLVGS-DKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLL 240 (310)
Q Consensus 164 ~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~a~~l~~~L~~-~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
...++++.++..+ .|.+++++..+.+.++.+++.+.|.+ +|++++..+..+-++.+.+.+-.+.
T Consensus 266 -~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~p~gTYL~WLD~r~l~l~------------ 332 (388)
T COG1168 266 -GPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTEPQGTYLAWLDCRELGLD------------ 332 (388)
T ss_pred -CCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecCCCceeeeeeccccCCC------------
Confidence 1234444444444 48899999999999999999999975 6999998666677777777764321
Q ss_pred hhHHHHHHHHHHHHHHHHhcCcEEEEEeEE---CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 241 SEEERINEFNRELLESINASGKAYMTHAVL---GGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 241 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
. .++.+.|.++.++.++++.. .+.+.+|+.+. ++.+-++..++.|+..++
T Consensus 333 --d-------~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~a---cpr~~L~eal~ri~~al~ 385 (388)
T COG1168 333 --D-------SELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFA---CPRAILEEALERLKRALK 385 (388)
T ss_pred --h-------HHHHHHHHHhhcEeccCCCccCcCCCceEEEecC---CCHHHHHHHHHHHHHHHh
Confidence 0 35667777777777765433 45789998854 567667776666665443
No 116
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.65 E-value=7.6e-15 Score=135.06 Aligned_cols=174 Identities=18% Similarity=0.236 Sum_probs=119.4
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
..|+. +++++.+ |+++++++|++. +.+|++.+.+|++|.+.|+++|+++||+||++++||++++
T Consensus 102 ~~g~~---~~~v~~~-------d~~~l~~~i~~~------~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~ 165 (369)
T cd00614 102 KLGIE---VTFVDPD-------DPEALEAAIKPE------TKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFA 165 (369)
T ss_pred hcCeE---EEEeCCC-------CHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCc
Confidence 34554 6666543 478999998653 4588889999999999999999999999999999999997
Q ss_pred cccccChhhhhhhcCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceecc
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITL 162 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 162 (310)
.+....+ . . .++|+++.|++|+++++.. .|+++.+++..+++..... .+.
T Consensus 166 ~~~~~~~----~--~-~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~-~~~-------------------- 217 (369)
T cd00614 166 TPYLQRP----L--E-LGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLR-LAL-------------------- 217 (369)
T ss_pred chhcCCh----h--h-hCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHH-Hhh--------------------
Confidence 7654211 1 1 1589999999999987643 5666555434433221110 000
Q ss_pred CCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC-----------------CceEEEEEEcC
Q 046506 163 SRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR-----------------HFAVVCFRVSP 224 (310)
Q Consensus 163 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------------~~~~v~~~~~~ 224 (310)
+........|.+++. .+.+..++++..++++++.+.|++.|++.-+.-| ..++++|.+.+
T Consensus 218 g~~~~p~~a~~~l~~--l~tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~ 294 (369)
T cd00614 218 GTILSPFDAWLLLRG--LKTLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG 294 (369)
T ss_pred CCCCCHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC
Confidence 001123444555443 3567778999999999999999998877533222 36789998874
No 117
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.64 E-value=1.2e-14 Score=131.36 Aligned_cols=257 Identities=17% Similarity=0.161 Sum_probs=165.2
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
+.|.. .++|++|++ ++.||++.+|++|++.++ .|+.+|. .|...++++|.++|++||++++.|+||+
T Consensus 93 ~~Ga~---PVFvDid~~-T~nid~~~ie~aIt~~tK------AIipVhl---~G~~~dm~~i~~la~~~~l~vIEDaAqa 159 (374)
T COG0399 93 LVGAK---PVFVDIDPD-TLNIDPDLIEAAITPRTK------AIIPVHL---AGQPCDMDAIMALAKRHGLPVIEDAAQA 159 (374)
T ss_pred HcCCe---EEEEecCCc-ccCCCHHHHHHHcccCCe------EEEEehh---ccCCCCHHHHHHHHHHcCCeEEEEcchh
Confidence 34555 999999986 689999999999998743 5555554 6777899999999999999999999998
Q ss_pred cccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCC
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSR 164 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 164 (310)
.|...-.. ..-.++.+-+++|-++|.+.+. ..|+++.++++..++.... ...+...+..+.+ .....|-
T Consensus 160 ~Ga~y~gk---~vGt~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~l-----r~hG~~~~~~~~y--~~~~~G~ 228 (374)
T COG0399 160 HGATYKGK---KVGSFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSL-----RNHGLSRDAVFKY--LHEELGY 228 (374)
T ss_pred ccCeecCc---ccccccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHH-----HHhCcCCCccccc--eeeeccc
Confidence 77642221 1223456788999999998766 6778888887655443211 1111000000111 1223333
Q ss_pred CcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHH
Q 046506 165 RFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEE 244 (310)
Q Consensus 165 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
.++...+.+++.....+.++++.++..++++...+.|++++++.+...+.....++...+.-+ +.+
T Consensus 229 N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~--------------~~~ 294 (374)
T COG0399 229 NYRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILV--------------DEE 294 (374)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEe--------------cCC
Confidence 445555666666666788999999999999999999999887766544333222222222100 000
Q ss_pred HHHHHHHHHHHHHHhcCcE---EEEEeE---------------EC-----CEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 245 RINEFNRELLESINASGKA---YMTHAV---------------LG-----GIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 245 ~~~~~~~~l~~~l~~~g~~---~~~~~~---------------~~-----~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
......+.+.|.+.|.. +..|.. +. ....+++- .++..+++|+++++++|++++
T Consensus 295 --~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP-~~p~l~~~~~~~V~~~l~~~~ 371 (374)
T COG0399 295 --GISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLP-LHPNLSEEDVDRVIEALKEVL 371 (374)
T ss_pred --CCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEcc-CCCCCCHHHHHHHHHHHHHHh
Confidence 01113566666666432 222210 00 14577776 568999999999999999876
Q ss_pred H
Q 046506 302 E 302 (310)
Q Consensus 302 ~ 302 (310)
.
T Consensus 372 ~ 372 (374)
T COG0399 372 G 372 (374)
T ss_pred c
Confidence 4
No 118
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.64 E-value=4.5e-14 Score=124.01 Aligned_cols=194 Identities=18% Similarity=0.234 Sum_probs=128.8
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
-+|++ +++|+.+ |++.++++|+++|+ .|.+.+..|+.+.+.|+++|+++||++|++++||.+.+
T Consensus 124 ~~Gi~---v~fvd~~-------d~~~~~~aI~~nTk------avf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~a 187 (426)
T COG2873 124 RLGIE---VRFVDPD-------DPENFEAAIDENTK------AVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFA 187 (426)
T ss_pred hcCcE---EEEeCCC-------CHHHHHHHhCcccc------eEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCC
Confidence 46777 8887664 37999999999875 89999999999999999999999999999999999998
Q ss_pred cccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhh-hccCCcccccccccccccc--C-CCCce
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNS-LSTNPEYLKNKATESKQVV--D-YKDWQ 159 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~-~~~~~~y~~~~~~~~~~~~--~-~~~~~ 159 (310)
.+++.-|.. .++|+++-|..||+++- ...|.++|--. .++-. ....|.| ....+++-+.. + +....
T Consensus 188 tpyl~rP~~-------hGADIVvHS~TK~igGhGt~iGG~iVD~G-~FDw~~~~rfP~~-~~p~p~YhGl~~~~~~g~~a 258 (426)
T COG2873 188 TPYLCRPIE-------HGADIVVHSATKYIGGHGTAIGGVIVDGG-KFDWTANGRFPEF-TTPDPSYHGLVYTETFGNAA 258 (426)
T ss_pred cceecchhh-------cCCCEEEEeecccccCCccccceEEEeCC-ccccccCCCCccc-CCCCccccceehhhhcccHH
Confidence 876544421 26999999999999973 34555555433 11111 0011111 11111110000 0 00000
Q ss_pred ------eccCCCc----chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC----------------
Q 046506 160 ------ITLSRRF----RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR---------------- 213 (310)
Q Consensus 160 ------~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~---------------- 213 (310)
.++.|.. .....|..+ .|.|.+.-+++|+++++..+.+.|.+.|.+..++-|
T Consensus 259 f~~~~r~~~lRDlGa~lsPfnAfl~l--qGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~ 336 (426)
T COG2873 259 FIIKARVQLLRDLGATLSPFNAFLLL--QGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLP 336 (426)
T ss_pred HHHHHHHHHHHhcccccCcHHHHHHH--hchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhcc
Confidence 0111111 112233332 378899999999999999999999999999876522
Q ss_pred --CceEEEEEEcCC
Q 046506 214 --HFAVVCFRVSPS 225 (310)
Q Consensus 214 --~~~~v~~~~~~~ 225 (310)
...+++|.+.+.
T Consensus 337 ~g~g~vltF~~kgg 350 (426)
T COG2873 337 KGAGAVLTFGVKGG 350 (426)
T ss_pred CCCceEEEEEecCh
Confidence 256889998874
No 119
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.64 E-value=5.8e-15 Score=136.53 Aligned_cols=163 Identities=18% Similarity=0.232 Sum_probs=114.0
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCe
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADS 105 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~ 105 (310)
.|+++++++|++. +.+|++.+++|++|.+.|+++|+++|+++|++++||+|++.+....+. . .++|+
T Consensus 134 ~d~~~l~~~i~~~------tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl----~---~g~Di 200 (386)
T PRK06767 134 ETEADIENKIRPN------TKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPL----E---LGCDA 200 (386)
T ss_pred CCHHHHHHhhCcC------ceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCCch----h---cCCcE
Confidence 4789999998764 348888999999999999999999999999999999999754432221 1 25899
Q ss_pred eeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHH
Q 046506 106 FSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANL 183 (310)
Q Consensus 106 ~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 183 (310)
++.|++|+++++.+ .|+++.+++ .+.+........++ + ....+..|..++ +...+
T Consensus 201 v~~S~sK~l~g~g~~~gG~v~~~~~-~i~~~~~~~~~~~g-------------------~-~~~~~~a~l~~~--~L~tl 257 (386)
T PRK06767 201 VVHSATKYIGGHGDVVAGVTICKTR-ALAEKIRPMRKDIG-------------------G-IMAPFDAWLLLR--GLKTL 257 (386)
T ss_pred EEecCcceecCCCCceeEEEEeChH-HHHHHHHHHHHHhC-------------------C-CCCHHHHHHHHc--CCCcH
Confidence 99999999988765 455655443 33332110000000 0 012233444443 34566
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCeEEecCC-----------CceEEEEEEcC
Q 046506 184 RHFLRSHVNMAKLFERLVGSDKRFEVVFPR-----------HFAVVCFRVSP 224 (310)
Q Consensus 184 ~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------~~~~v~~~~~~ 224 (310)
..++++.+++++++.+.|+++|+++.+..| ..++++|.+.+
T Consensus 258 ~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~ 309 (386)
T PRK06767 258 AVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKG 309 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcC
Confidence 778899999999999999999999855422 25689998864
No 120
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.64 E-value=2.6e-14 Score=130.98 Aligned_cols=236 Identities=12% Similarity=0.048 Sum_probs=148.3
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|+. ++.+|.++.+.+.+| +++++.+.+. +.++++++++|++|...+ +++|+++|+++|+++++
T Consensus 111 ~~~~g~~---~~~v~~~~~~~~~~~-~~~~~~~~~~------~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~ 180 (356)
T PRK08056 111 LQQVGCE---IRRYSLREADGWQLT-DAILEALTPD------LDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALIL 180 (356)
T ss_pred HHHcCCe---EEEEecccccCCCcc-HHHHHhccCC------CCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEE
Confidence 4567777 999998764445565 4555655432 347778899999999988 88899999999999999
Q ss_pred ecccccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCc
Q 046506 80 DAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDW 158 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 158 (310)
|+++................. .-.++..|++|+++.| .-+|+++..++..+......... ..
T Consensus 181 De~y~~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~~~----~~------------ 243 (356)
T PRK08056 181 DEAFIDFIPDETGFIPQLADN-PHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQMP----WS------------ 243 (356)
T ss_pred ecchhccCCcchHHHHHhccC-CCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCC----Cc------------
Confidence 999854432211111111221 2457889999999944 55777765554443322111100 00
Q ss_pred eeccCCCcchHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhcc
Q 046506 159 QITLSRRFRSLKLWFVLRNY-GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYEN 237 (310)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 237 (310)
...+...++...+ +.+...+..++..+..+++.+.|++++++.+. ++.++.+.+.+...
T Consensus 244 -------~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~------------ 303 (356)
T PRK08056 244 -------INAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVW-PGRANYLFLRCERP------------ 303 (356)
T ss_pred -------hhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc-CCCCcEEEEEcCCC------------
Confidence 0112223333333 23445566677788889999999888888765 55666665554321
Q ss_pred ccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 238 SLLSEEERINEFNRELLESINASGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
..++.+.|.+.|.....+..+. ..+++|+++. ++++.++|+++|+++.
T Consensus 304 ------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 304 ------------DIDLQRALLTQRILIRSCANYPGLDSRYYRVAIR----SAAENERLLAALRNVL 353 (356)
T ss_pred ------------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEEc----CHHHHHHHHHHHHHHH
Confidence 1356677777775444433332 2468999944 5789999999998764
No 121
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.64 E-value=8.9e-15 Score=133.98 Aligned_cols=164 Identities=15% Similarity=0.177 Sum_probs=120.1
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCC
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGAD 104 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D 104 (310)
..|+++++++|++++ .+|++.+++|++|.+.|+++|+++|+++|++++||++++.+....+ . + .++|
T Consensus 123 ~~d~~~l~~~i~~~T------klV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~~p----l--~-~gaD 189 (364)
T PRK07269 123 ANTEEELIAAIEEDT------DIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQRP----I--E-LGAD 189 (364)
T ss_pred cCCHHHHHHhcCcCc------eEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCc----h--h-hCCc
Confidence 467899999997654 4899999999999999999999999999999999999865543211 1 1 2699
Q ss_pred eeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 105 SFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 105 ~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
+++.|+||+++++.+ .|+++.++++...+..... .+ .|........|..+ .+...
T Consensus 190 ivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~-~~--------------------~G~~~s~~~a~l~~--~~L~t 246 (364)
T PRK07269 190 IVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNL-NT--------------------TGAVLSPFDSYLLM--RGLKT 246 (364)
T ss_pred EEEecCceeccCCCcccceEEEeCcHHHHHHHHHHH-HH--------------------hCCCCCHHHHHHHH--cCCCc
Confidence 999999999998765 5666666665433322100 00 01112344445444 35567
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCeE-EecCCCceEEEEEEcC
Q 046506 183 LRHFLRSHVNMAKLFERLVGSDKRFE-VVFPRHFAVVCFRVSP 224 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~~~~~-v~~~~~~~~v~~~~~~ 224 (310)
++.++++..++++.+.+.|++.|++. ++-|+..++++|.+.+
T Consensus 247 L~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~~ 289 (364)
T PRK07269 247 LSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVAD 289 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEECC
Confidence 99999999999999999999999875 4446678899998863
No 122
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.63 E-value=7.1e-14 Score=129.51 Aligned_cols=223 Identities=13% Similarity=0.055 Sum_probs=133.1
Q ss_pred cEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhh-----hcCCCCCCeeeeecccccccccc
Q 046506 45 PLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF-----IDGVEGADSFSLNAHKWFFTTLD 119 (310)
Q Consensus 45 ~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~hK~l~~p~g 119 (310)
+.+|++....+++|.+.|+++|+++|++||+++++|++|+.+.. ....+.. .....++|+++.+.+|+++ |.|
T Consensus 139 t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~-g~~G~g~~~~~g~~p~~~~Div~~slsk~~g-~~g 216 (392)
T PLN03227 139 RRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTL-GKSGRGSLEHAGLKPMVHAEIVTFSLENAFG-SVG 216 (392)
T ss_pred cEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECccccccc-CCCCCcHHHHcCCCCCCCceEEEeechhhhh-ccC
Confidence 56888888899999999999999999999999999999974432 1110000 0112357999999999876 432
Q ss_pred eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Q 046506 120 CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFE 198 (310)
Q Consensus 120 ~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~ 198 (310)
|++ +.+++...........+.+ .++.+ +.+.+..+++..+ ...+++.++.+++.++++
T Consensus 217 -g~v-~~~~~~~~~~~~~~~~~~~-----------------~~~~~p~~~~aa~~al~~~--~~~~~~~~~l~~~~~~l~ 275 (392)
T PLN03227 217 -GMT-VGSEEVVDHQRLSGSGYCF-----------------SASAPPFLAKADATATAGE--LAGPQLLNRLHDSIANLY 275 (392)
T ss_pred -cEE-ecCHHHHHHHHHhCcCccc-----------------cCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHH
Confidence 233 3444333211111111111 11111 1222222333222 224567888899999999
Q ss_pred HHHcCCCCeEE----------ecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEE-E
Q 046506 199 RLVGSDKRFEV----------VFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMT-H 267 (310)
Q Consensus 199 ~~L~~~~~~~v----------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~ 267 (310)
+.|++. ++.. ...+.++++.+.+.+.... .. .+ -......+.+.+.++|.+... +
T Consensus 276 ~~L~~~-~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~---------~~-~~---~~~~~~~~~~~~~~~Gi~~~~~~ 341 (392)
T PLN03227 276 STLTNS-SHPYALKLRNRLVITSDPISPIIYLRLSDQEAT---------RR-TD---ETLILDQIAHHSLSEGVAVVSTG 341 (392)
T ss_pred HHHHhc-CCccccccccccccCCCCCCCEEEEEeCCHHHh---------hh-hh---hhhHHHHHHHHHHHCCCEEEecc
Confidence 999752 3321 2234567788877542100 00 00 011235777888888865432 1
Q ss_pred e------EECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 268 A------VLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 268 ~------~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
. .......+|++++ ...|+||||+++++|++.+.++.
T Consensus 342 ~~~~~~~~~~P~~~iR~~~~-~~~t~eei~~~~~~l~~~~~~~~ 384 (392)
T PLN03227 342 GHVKKFLQLVPPPCLRVVAN-ASHTREDIDKLLTVLGEAVEAIL 384 (392)
T ss_pred cccCCcCCCCCCceEEEEec-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 0112468999966 57999999999999999987753
No 123
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.63 E-value=2.3e-14 Score=132.31 Aligned_cols=259 Identities=14% Similarity=0.075 Sum_probs=153.1
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+...|+. ++.++++++ ++.+|+++++++|++.+ .+|+.++ .+|...|+++|+++|++||+++++|+|
T Consensus 90 ~~~~G~~---~v~vd~~~~-~~~~d~~~l~~~i~~~t------kav~~~~---~~G~~~d~~~i~~~a~~~gi~vi~D~a 156 (379)
T PRK11658 90 IVLLGAT---PVMVDVDRD-TLMVTPEAIEAAITPRT------KAIIPVH---YAGAPADLDAIRAIGERYGIPVIEDAA 156 (379)
T ss_pred HHHcCCE---EEEEecCCC-cCCcCHHHHHHhcccCC------eEEEEeC---CCCCcCCHHHHHHHHHHcCCeEEEECC
Confidence 3456776 999999875 46799999999997643 3554333 479999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhcc-CCc-ccccccc-ccccccCCCCce
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLST-NPE-YLKNKAT-ESKQVVDYKDWQ 159 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~-~~~-y~~~~~~-~~~~~~~~~~~~ 159 (310)
|+.+....... ... .+.++++++.+|++.++. .|+++.++++...+.... ..+ +...... .....+.+. .
T Consensus 157 ~a~g~~~~~~~---~g~-~g~~~~Sf~~~K~l~~g~-GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~--~ 229 (379)
T PRK11658 157 HAVGTYYKGRH---IGA-RGTAIFSFHAIKNITCAE-GGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAE--V 229 (379)
T ss_pred CccCCeECCee---cCC-CCCEEEeCCCCCcCcccC-ceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcce--e
Confidence 98665432211 112 245889999999986643 344444555543332210 001 0000000 000000000 0
Q ss_pred eccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC-----ceEEEEEEcCCcchhhhhhh
Q 046506 160 ITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH-----FAVVCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~-----~~~v~~~~~~~~~~~~~~~~ 234 (310)
...|..+....+.+++.....++++++.++..++++++.+.|++++...+..+.. ..++++++.+...
T Consensus 230 ~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 302 (379)
T PRK11658 230 LTPGYKYNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERC------- 302 (379)
T ss_pred eccccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccc-------
Confidence 1223333444556666666678899999999999999999999886443322211 2344555543100
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhcCcEEE---EEeEE--------C----------CEeEEEEEccCCCCCHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESINASGKAYM---THAVL--------G----------GIYAIRFAAGATLTEERHVMVA 293 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~~--------~----------~~~~iRis~~~~~~t~edi~~l 293 (310)
.....++.+.|.+.|+... .+... . ....+-+- .++..|++|++++
T Consensus 303 ------------~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP-~~~~l~~~~~~~i 369 (379)
T PRK11658 303 ------------GISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLP-LFPDMTDADVDRV 369 (379)
T ss_pred ------------cCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEcc-CCCCCCHHHHHHH
Confidence 0011356666666664211 11000 0 12345554 4578999999999
Q ss_pred HHHHHHHH
Q 046506 294 WTVVQEHL 301 (310)
Q Consensus 294 i~~l~~~~ 301 (310)
+++|+++.
T Consensus 370 ~~~i~~~~ 377 (379)
T PRK11658 370 ITALQQIA 377 (379)
T ss_pred HHHHHHHH
Confidence 99999864
No 124
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.63 E-value=1.8e-14 Score=134.59 Aligned_cols=181 Identities=18% Similarity=0.188 Sum_probs=114.6
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
..|+. +++++. .|+++++++|+++ +.+|++.+.+|++|.+.|+++|+++||++|++++||++++
T Consensus 126 ~~Gv~---v~~vd~-------~d~e~l~~ai~~~------tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a 189 (431)
T PRK08248 126 KLGIT---VKFVDP-------SDPENFEAAITDK------TKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFA 189 (431)
T ss_pred hCCEE---EEEECC-------CCHHHHHHhcCCC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCC
Confidence 34554 666654 3789999999764 3478888999999999999999999999999999999997
Q ss_pred cccccChhhhhhhcCCCCCCeeeeecccccccccc-eEEEEEeCchh-HHh------hhccCCccccccccccccccC--
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD-CCCLWVKDPSD-LVN------SLSTNPEYLKNKATESKQVVD-- 154 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-~g~l~v~~~~~-~~~------~~~~~~~y~~~~~~~~~~~~~-- 154 (310)
.+....+. . .++|+++.|+||++++|.. .|++++.+... ... .....+.+.........+...
T Consensus 190 ~~~~~~pl------~-~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (431)
T PRK08248 190 SPYLLRPI------E-HGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYI 262 (431)
T ss_pred ccccCChh------H-cCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHH
Confidence 54332221 1 2699999999999998853 67777654421 100 000001110000000000000
Q ss_pred ---CCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEe
Q 046506 155 ---YKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVV 210 (310)
Q Consensus 155 ---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~ 210 (310)
........|....+..+|..+ .|...+..++++..+++..+.+.|+++|++.-+
T Consensus 263 ~~~~~~~~~~~G~~l~p~~a~l~~--rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V 319 (431)
T PRK08248 263 TKARVQLLRDLGAALSPFNSFLLL--QGLETLHLRMERHSENALAVAKFLEEHEAVEWV 319 (431)
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHh--cCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceE
Confidence 000011112223344455443 366788999999999999999999999998643
No 125
>PLN02452 phosphoserine transaminase
Probab=99.63 E-value=3.8e-15 Score=136.01 Aligned_cols=210 Identities=12% Similarity=0.075 Sum_probs=144.8
Q ss_pred cEEEEEeccCCcccc-cCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEE
Q 046506 45 PLFLCATIGTTAITA-VDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCL 123 (310)
Q Consensus 45 ~~~v~~~~~~~~~G~-~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l 123 (310)
+..|.++|+.|.+|+ +.|++++++ ++++||++++.+..+.+... .++..+++||+++ |.|.|++
T Consensus 146 ~~~v~~~hnETstGv~~~~~~~i~~------~~lvVDa~Ss~g~~pidv~~--------~~v~~~saqK~lG-P~Gl~~v 210 (365)
T PLN02452 146 AKFVHICANETIHGVEFKDYPDVGN------VPLVADMSSNFLSKPVDVSK--------YGVIYAGAQKNVG-PSGVTIV 210 (365)
T ss_pred CcEEEECCCCCCCcEecCcccccCC------CeEEEECCccccCcccCHHH--------cCEEEEecccccC-CCCeEEE
Confidence 458999999999999 588888864 89999999999998876432 3344479999985 9999999
Q ss_pred EEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC--cchHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHH
Q 046506 124 WVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR--FRSLKLWFVLRNYGVA-NLRHFLRSHVNMAKLFERL 200 (310)
Q Consensus 124 ~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~-~~~~~~~~~~~~a~~l~~~ 200 (310)
+++++. +.+.-...|.|+..... ....... .++ +..+++..+++.+..+ |++.+.++..++++++++.
T Consensus 211 ~vr~~~-l~~~~~~~~~~~~~~~~-------~~~~s~~-~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~ 281 (365)
T PLN02452 211 IIRKDL-IGNARPITPGMLDYKIH-------AENDSLY-NTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDA 281 (365)
T ss_pred EEcHHH-HhhcccCCCchhhHHHH-------HhcCCcc-CChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHH
Confidence 998774 33322222333221100 0000000 122 2345666778877665 8999999999999999999
Q ss_pred HcCCCCeEEe-cC---CCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEE
Q 046506 201 VGSDKRFEVV-FP---RHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAI 276 (310)
Q Consensus 201 L~~~~~~~v~-~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~i 276 (310)
|.+.+|+... .+ ....+++|.+... .+.+.+.+.+.++|.+...+... .+.+
T Consensus 282 l~~~~G~y~~~~~~~~rs~~~vsF~~~~~----------------------~~~~~f~~~~~~~g~~~~~G~r~--~gg~ 337 (365)
T PLN02452 282 IDESNGFYVCPVEKSVRSLMNVPFTLGGS----------------------ELEAEFVKEAAKAGMVQLKGHRS--VGGM 337 (365)
T ss_pred HHhCCCcccCCCChHHhCCeEEEEEcCCc----------------------hhHHHHHHHHHHCCCcccCCccc--cCce
Confidence 9988787211 11 1234788887653 24467888888888655443322 2239
Q ss_pred EEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 277 RFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 277 Ris~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
|+|+-+ ..+.++|+.|++.+++..++
T Consensus 338 R~s~yn-a~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 338 RASIYN-AMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred EEECcC-CCCHHHHHHHHHHHHHHHHh
Confidence 999886 69999999999999987653
No 126
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.62 E-value=3.7e-14 Score=131.43 Aligned_cols=163 Identities=18% Similarity=0.218 Sum_probs=114.4
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCe
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADS 105 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~ 105 (310)
.|+++++++|+++ +.+|++.+++|++|.+.|+++|+++|+++|++++||++++.+....+ . . .++|+
T Consensus 137 ~d~e~l~~~i~~~------tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~----l--~-~~~Di 203 (398)
T PRK08249 137 GDHEQIEAEIAKG------CDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQNP----L--A-LGADL 203 (398)
T ss_pred CCHHHHHHhcCCC------CeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCCc----h--h-hCCCE
Confidence 6889999999765 34788889999999999999999999999999999999975543211 1 1 25999
Q ss_pred eeeecccccccccc-eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHH
Q 046506 106 FSLNAHKWFFTTLD-CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLR 184 (310)
Q Consensus 106 ~~~~~hK~l~~p~g-~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 184 (310)
++.|++|+++++.+ .|++++.+++...+..... .+ .+........|.+++ +.+.+.
T Consensus 204 vv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~-~~--------------------~g~~~s~~~a~l~l~--~l~tL~ 260 (398)
T PRK08249 204 VIHSATKFLSGHADALGGVVCGSKELMEQVYHYR-EI--------------------NGATMDPMSAYLILR--GMKTLK 260 (398)
T ss_pred EeccCceecCCCCCceEEEEECCHHHHHHHHHHH-Hh--------------------cCCCCCHHHHHHHHh--CcchHH
Confidence 99999999987643 3445555555443322111 00 011123334444443 567788
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCeEEecCC-----------------CceEEEEEEcC
Q 046506 185 HFLRSHVNMAKLFERLVGSDKRFEVVFPR-----------------HFAVVCFRVSP 224 (310)
Q Consensus 185 ~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------------~~~~v~~~~~~ 224 (310)
.++++.+++++.+.+.|++.|.++-+.-| ..++++|.+.+
T Consensus 261 ~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~ 317 (398)
T PRK08249 261 LRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKG 317 (398)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcC
Confidence 89999999999999999999888643211 14588888864
No 127
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.62 E-value=1.9e-14 Score=132.05 Aligned_cols=243 Identities=16% Similarity=0.144 Sum_probs=154.3
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHH---HHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKP---LCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~---I~~l~~~~g~~l~v 79 (310)
++..|+. ++.+|.+..+.+.+|+++|++.+++...+...+.++++..++|++|...+.++ |+++|++||+++++
T Consensus 110 ~~~~g~~---~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~ 186 (363)
T PF00155_consen 110 ARLLGAE---VIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIV 186 (363)
T ss_dssp HHHTTSE---EEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEE
T ss_pred ccccCce---eeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceee
Confidence 4566777 88999764456799999999999985443323567888888999999877555 55559999999999
Q ss_pred ecccccccccChhh---hhhhcCCCCCC-eeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccC
Q 046506 80 DAAYAGSACICPEF---RHFIDGVEGAD-SFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVD 154 (310)
Q Consensus 80 D~a~~~~~~~~~~~---~~~~~~~~~~D-~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 154 (310)
|.+|+......... ...... +.+ +++.|..|.++.| .-.|++++ ++...+..-.....+.. .
T Consensus 187 De~y~~~~~~~~~~~~~~~~~~~--~~~vi~~~S~SK~~g~~GlRvG~i~~-~~~~~~~l~~~~~~~~~-~--------- 253 (363)
T PF00155_consen 187 DEAYSDLIFGDPDFGPIRSLLDE--DDNVIVVGSLSKSFGLPGLRVGYIVA-PPELIERLRRFQRSGLS-S--------- 253 (363)
T ss_dssp EETTTTGBSSSSHTHHHHGHHTT--TSTEEEEEESTTTTTSGGGTEEEEEE-EHHHHHHHHHHHHHTTS-S---------
T ss_pred eeceeccccCCCccCcccccccc--cccceeeeeccccccccccccccccc-hhhhhhhhhhccccccc-c---------
Confidence 99997766543211 111121 233 7789999998766 34677777 44443322111111111 0
Q ss_pred CCCceeccCCCcchHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhh
Q 046506 155 YKDWQITLSRRFRSLKLWFVLRNYG--VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLK 232 (310)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~ 232 (310)
......+...+...+ ....+++.++..++.+++.+.|.+. ++.+..++ .+++.+...+.
T Consensus 254 ----------~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~-~~~~~~~~~~~------- 314 (363)
T PF00155_consen 254 ----------SPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPE-AGFFLWVRLDP------- 314 (363)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHS-BSSEEEEEESH-------
T ss_pred ----------chhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeecc-CccEEEEEccc-------
Confidence 001111222222222 1267888899999999999999887 89888554 55555543331
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHhc-CcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHH
Q 046506 233 TKYENSLLSEEERINEFNRELLESINAS-GKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVV 297 (310)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l 297 (310)
....++.+.|.++ |....++......+++|+++ . ..++|+++.++++|
T Consensus 315 ---------------~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~-a-~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 315 ---------------NDAEELAQELLEEYGILVRPGSYFGVPGYIRISL-A-SHSEEDLEEALERL 363 (363)
T ss_dssp ---------------HHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG-G-CSCHHHHHHHHHHH
T ss_pred ---------------chHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe-c-cCCHHHHHHHHhhC
Confidence 1224677777777 65444433333467899997 3 57899999999876
No 128
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.62 E-value=3.4e-14 Score=131.17 Aligned_cols=163 Identities=17% Similarity=0.231 Sum_probs=116.6
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCe
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADS 105 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~ 105 (310)
.|++++++++++. +.+|.+.+++|++|.+.|+++|+++|+++|++++||++++.+....+. . .++|+
T Consensus 125 ~d~e~l~~~l~~~------tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~~pl------~-~gaDi 191 (386)
T PRK08045 125 GDEQALRAALAEK------PKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQNPL------A-LGADL 191 (386)
T ss_pred CCHHHHHHhcccC------CeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCCch------h-hCCCE
Confidence 6789999998764 448888999999999999999999999999999999999766442221 1 25899
Q ss_pred eeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHH
Q 046506 106 FSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANL 183 (310)
Q Consensus 106 ~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 183 (310)
++.|.|||++++.+ .|++.+++++...+.. ....++.. ....+..|.+++ |.+.+
T Consensus 192 vv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~-~~~~~~g~--------------------~~~p~~~~l~~r--gl~tl 248 (386)
T PRK08045 192 VLHSCTKYLNGHSDVVAGVVIAKDPDVVTELA-WWANNIGV--------------------TGGAFDSYLLLR--GLRTL 248 (386)
T ss_pred EEeecceeccCCCCceeEEEEeCcHHHHHHHH-HHHHhcCC--------------------CCCHHHHHHHHh--hhccH
Confidence 99999999998876 5666555554432221 00011110 123345565554 44568
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCeEEec-C-----C-----------CceEEEEEEcC
Q 046506 184 RHFLRSHVNMAKLFERLVGSDKRFEVVF-P-----R-----------HFAVVCFRVSP 224 (310)
Q Consensus 184 ~~~~~~~~~~a~~l~~~L~~~~~~~v~~-~-----~-----------~~~~v~~~~~~ 224 (310)
..++++..++++.+.+.|++.|.+.-+. | | ..++++|.+.+
T Consensus 249 ~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~ 306 (386)
T PRK08045 249 VPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG 306 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecC
Confidence 9999999999999999999999885332 1 1 14578888864
No 129
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.62 E-value=4.6e-14 Score=130.58 Aligned_cols=163 Identities=17% Similarity=0.162 Sum_probs=115.3
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCe
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADS 105 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~ 105 (310)
.|+++|+++|+++ +.+|++..++|++|.+.|+++|+++|+++|+++++|++++.+....+. . .++|+
T Consensus 134 ~d~e~l~~~i~~~------tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~------~-~gaDi 200 (388)
T PRK07811 134 SDLDAVRAAITPR------TKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQPL------A-LGADV 200 (388)
T ss_pred CCHHHHHHhcCcC------CeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCCch------h-hCCcE
Confidence 5789999999764 348888899999999999999999999999999999999766432221 1 25899
Q ss_pred eeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHH
Q 046506 106 FSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANL 183 (310)
Q Consensus 106 ~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 183 (310)
+++|++|++++|.+ .|+++++++....... ....+. +........|.+++ +...+
T Consensus 201 vv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~-~~~~~~--------------------g~~~s~~~a~l~~~--~L~tl 257 (388)
T PRK07811 201 VVHSTTKYIGGHSDVVGGALVTNDEELDEAFA-FLQNGA--------------------GAVPGPFDAYLTLR--GLKTL 257 (388)
T ss_pred EEecCceeecCCCCcEEEEEEECCHHHHHHHH-HHHHhc--------------------CCCCCHHHHHHHHh--ccCcH
Confidence 99999999998865 5667766665432221 000000 00112233343333 44568
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCeEEecCC-----------------CceEEEEEEcC
Q 046506 184 RHFLRSHVNMAKLFERLVGSDKRFEVVFPR-----------------HFAVVCFRVSP 224 (310)
Q Consensus 184 ~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------------~~~~v~~~~~~ 224 (310)
..++++..++++.+.+.|++.|++.-+.-| ..++++|.+.+
T Consensus 258 ~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 315 (388)
T PRK07811 258 AVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAG 315 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCC
Confidence 889999999999999999999998643211 14588998864
No 130
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.62 E-value=7.3e-14 Score=130.22 Aligned_cols=252 Identities=12% Similarity=0.018 Sum_probs=157.5
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|.. ++.+|.++++.+.+|++++++++.+. +.+++++.++|++|.+.+ +++|.++|++||+++++
T Consensus 147 ~~~~g~~---v~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~ 217 (410)
T PRK06290 147 TKYYGGE---VYNLPLLEENNFLPDLDSIPKDIKEK------AKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQ 217 (410)
T ss_pred HHHcCCE---EEEEecCCCcCCcCCHHHHHHhhccc------ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEE
Confidence 4556776 99999987556788999999988653 447777788999999988 57788899999999999
Q ss_pred ecccccccccChhhhhh--hcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 80 DAAYAGSACICPEFRHF--IDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~--~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
|.+++....... .... .......+++..|..|.++.| .-+|+++ .++..+.........+ ...
T Consensus 218 DEaY~~~~~~~~-~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii-~~~~l~~~l~~~~~~~-~~~----------- 283 (410)
T PRK06290 218 DAAYAALTFDGK-PLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVV-GNELIVKAFATVKDNN-DSG----------- 283 (410)
T ss_pred ecchhhceeCCC-CcChhcCCCccccEEEEeechhhcCCchhheEeEE-eCHHHHHHHHHHHhcc-ccC-----------
Confidence 999975433211 1111 111123468889999999655 2356665 4554433221111011 000
Q ss_pred CceeccCCCcchHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEE-EEcCCcchhhhhhh
Q 046506 157 DWQITLSRRFRSLKLWFVLRNYG-VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCF-RVSPSAVMDKLKTK 234 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~-~~~~~~~~~~~~~~ 234 (310)
...+...++...+. .+..++..++..+..+.+.+.|++. ++.+. +|..+.+.| .+++....
T Consensus 284 ---------~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~p~g~f~l~v~lp~~~~~------ 346 (410)
T PRK06290 284 ---------QFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEV-GFKAE-MPGGTFYLYVKAPKGTKS------ 346 (410)
T ss_pred ---------CcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhC-CCeec-CCCeeeEEEEECCCcccc------
Confidence 00111112222221 2345667777788888999999886 77765 455555443 44331000
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.... .-..++.+.|.++|.+.+.+.. ...+++||++..+..++|+.++++++|++.+.++
T Consensus 347 --~~~~-------~~~~~~~~~Ll~~~~v~~~p~~-~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 347 --GIKF-------ENAEEFSQYLIKEKLISTVPWD-DAGHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred --CCCC-------CCHHHHHHHHHHhCCEEEECCc-cccCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 0000 0124677888888776654432 1235899998877789999999999999988765
No 131
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.61 E-value=3.9e-14 Score=131.15 Aligned_cols=174 Identities=19% Similarity=0.251 Sum_probs=119.5
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
.+|+. +++++.+ |+++++++|+++ +.+|++.+++|++|.+.|+++|+++|+++|+++++|++++
T Consensus 123 ~~G~~---v~~vd~~-------d~~~l~~~i~~~------tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~ 186 (390)
T PRK08133 123 RFGIE---TTFVDLT-------DLDAWRAAVRPN------TKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFC 186 (390)
T ss_pred HcCcE---EEEECCC-------CHHHHHHhcCcC------CeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCc
Confidence 34555 6666653 578999998764 3488888999999999999999999999999999999986
Q ss_pred cccccChhhhhhhcCCCCCCeeeeecccccccccc-eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccC
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD-CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLS 163 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 163 (310)
.+....+. . .++|+++.|+||+++++.. .|++++.++..+.+.. .+... .+
T Consensus 187 ~~~~~~pl------~-~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~----~~~~~-----------------~g 238 (390)
T PRK08133 187 TPALQQPL------K-LGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVF----GFLRT-----------------AG 238 (390)
T ss_pred ccccCCch------h-hCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHH----HHHHH-----------------hC
Confidence 55432221 1 1589999999999987642 4444445554332221 01110 01
Q ss_pred CCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC-----------------CceEEEEEEcC
Q 046506 164 RRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR-----------------HFAVVCFRVSP 224 (310)
Q Consensus 164 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------------~~~~v~~~~~~ 224 (310)
........|..++ +.+.+..++++..+++..+.+.|.+.|++.-+.-| ..++++|.+.+
T Consensus 239 ~~~~~~~a~~~l~--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~ 314 (390)
T PRK08133 239 PTLSPFNAWVFLK--GLETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKG 314 (390)
T ss_pred CCCCHHHHHHHHc--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcC
Confidence 1122334444443 55688999999999999999999999988644221 14588898864
No 132
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.61 E-value=1.5e-13 Score=128.07 Aligned_cols=256 Identities=13% Similarity=0.082 Sum_probs=151.7
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
+...|++ ++.++.++++++.+|++++++++.+.+ .++++++++|++|.+.+ +++|.++|+++|+++++
T Consensus 137 ~~~~g~~---~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~ 207 (403)
T TIGR01265 137 AAFSGLE---VRLYDLLPEKDWEIDLDGLEALADEKT------VAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIA 207 (403)
T ss_pred HHHcCCE---EEEecCCcccCCccCHHHHHHHhCcCc------cEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 4456776 888888654456899999999886543 37888889999999865 88999999999999999
Q ss_pred ecccccccccChhhhhhhcCCC-CCC-eeeeecccccccc-cceEEEEEeCc-hhHHh-hhccCCccccccccccccccC
Q 046506 80 DAAYAGSACICPEFRHFIDGVE-GAD-SFSLNAHKWFFTT-LDCCCLWVKDP-SDLVN-SLSTNPEYLKNKATESKQVVD 154 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~-~~D-~~~~~~hK~l~~p-~g~g~l~v~~~-~~~~~-~~~~~~~y~~~~~~~~~~~~~ 154 (310)
|++++......+.+.. ...+. ... .+..|..|.++.| .-+|++++.++ ..+.. .......+.....
T Consensus 208 De~y~~~~~~~~~~~~-~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~-------- 278 (403)
T TIGR01265 208 DEIYGHMVFGDAPFIP-MASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQRIL-------- 278 (403)
T ss_pred EccccccccCCCCccc-hhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHHHHHHHHhhhhc--------
Confidence 9998755432211111 11111 112 4557999987666 45788777543 21111 1000000000000
Q ss_pred CCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhh
Q 046506 155 YKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~ 234 (310)
+...+....+..+++......+++..++..++.+.+.+.|+.++++.+..+..+..+.+.++.....
T Consensus 279 -------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~------ 345 (403)
T TIGR01265 279 -------GPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMYLMVKLELELFP------ 345 (403)
T ss_pred -------CCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeEEEEeccccccC------
Confidence 0000111222223322223456677778888888999999888788765455566666666432000
Q ss_pred hccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESIN-ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+. ....++.+.+. +.|.....+......+++|+++.. .++.++..++.|.+++++
T Consensus 346 -------~~----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~---~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 346 -------EI----KDDVDFCEKLVREESVICLPGSAFGLPNWVRITITV---PESMLEEACSRIKEFCER 401 (403)
T ss_pred -------CC----CCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecC---CHHHHHHHHHHHHHHHHh
Confidence 00 00134556554 456544444434446799999663 477888888888877654
No 133
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.61 E-value=8.5e-16 Score=137.09 Aligned_cols=171 Identities=14% Similarity=0.110 Sum_probs=111.0
Q ss_pred eecCCCCCCEEEEecCCCCC----cccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEe
Q 046506 4 QIVGIDVKNFRAIKTTKSSS----YGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~----~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~v 79 (310)
.+.|+. +++++++.++. +.+|++++++++++..+ +.+++++++ |.+|.+.|+++|+++|+++|++++|
T Consensus 117 ~~~g~~---~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~----~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~liv 188 (294)
T cd00615 117 VLSGAV---PVYLKPERNPYYGIAGGIPPETFKKALIEHPD----AKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLV 188 (294)
T ss_pred HHCCCE---EEEecCccCcccCcCCCCCHHHHHHHHHhCCC----ceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEE
Confidence 345655 88888765432 37999999999976422 456777765 6799999999999999999999999
Q ss_pred ecccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCce
Q 046506 80 DAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 159 (310)
|+||+++....+....... ..++|+++.|+||++++|.++|++++++.......+..... +
T Consensus 189 DeA~~~~~~~~~~~~~~~~-~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~~-~----------------- 249 (294)
T cd00615 189 DEAHGAHFRFHPILPSSAA-MAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEALN-L----------------- 249 (294)
T ss_pred ECcchhhhccCcccCcchh-hcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHHHH-H-----------------
Confidence 9999865433222111111 12699999999999998888888888765211111110000 0
Q ss_pred eccCCC-c-chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHc
Q 046506 160 ITLSRR-F-RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVG 202 (310)
Q Consensus 160 ~~~~~~-~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~ 202 (310)
++.+.+ + ...++..++..+..++ ++++++..++++++++.|.
T Consensus 250 ~~ttsps~~~~asl~~a~~~~~~~g-~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 250 HQSTSPSYLILASLDVARAMMALEG-KELVEELIELALYARQEIN 293 (294)
T ss_pred HCCCCcHHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHh
Confidence 111111 1 2234444554443344 4467888889999998875
No 134
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.61 E-value=7.1e-14 Score=130.50 Aligned_cols=184 Identities=16% Similarity=0.129 Sum_probs=116.3
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCe
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADS 105 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~ 105 (310)
.|+++++++|++. +.+|++.+++|++|.+.|+++|+++|+++|++++||++++.+....+. . .++|+
T Consensus 131 ~d~e~le~ai~~~------tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~~p~------~-~gaDi 197 (425)
T PRK06084 131 DDIAALEALIDER------TKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLCRPF------E-HGADI 197 (425)
T ss_pred CCHHHHHHHhccC------CcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCChh------h-cCCCE
Confidence 4789999999765 347888899999999999999999999999999999999865442221 1 25999
Q ss_pred eeeecccccccccc-eEEEEEeCchh-HHhh------h-ccCCccccccccccccccCCC-----CceeccCCCcchHHH
Q 046506 106 FSLNAHKWFFTTLD-CCCLWVKDPSD-LVNS------L-STNPEYLKNKATESKQVVDYK-----DWQITLSRRFRSLKL 171 (310)
Q Consensus 106 ~~~~~hK~l~~p~g-~g~l~v~~~~~-~~~~------~-~~~~~y~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 171 (310)
++.|+||+++++.. .|++++.+... .... + ..+|.|.........+..... ......+.+.....+
T Consensus 198 vv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a 277 (425)
T PRK06084 198 VVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNA 277 (425)
T ss_pred EEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHH
Confidence 99999999987633 34444543210 0010 0 112222211000000000000 000011222334444
Q ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC----------------C--ceEEEEEEcC
Q 046506 172 WFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR----------------H--FAVVCFRVSP 224 (310)
Q Consensus 172 ~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~----------------~--~~~v~~~~~~ 224 (310)
|..+ .|...+..++++..+++..+.+.|+++|++.-+.-| . .++++|.+.+
T Consensus 278 ~l~l--rgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~~ 346 (425)
T PRK06084 278 FLIL--QGLETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPASILSFGIKG 346 (425)
T ss_pred HHHH--cCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcceEEEEEecC
Confidence 5444 466889999999999999999999999988643211 2 4588888865
No 135
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.61 E-value=1.2e-14 Score=132.77 Aligned_cols=261 Identities=12% Similarity=0.017 Sum_probs=161.3
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeec
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
+|+.+|++ ++..+..+++. .+++++++. . + -|+++|+.|.+|...|+++|+..+ ++++++||+
T Consensus 100 ia~~~g~~--~v~~l~~~~g~--~~~~~~ve~----~-~------~v~~vhnETSTGv~npv~~i~~~~--~~~lliVDa 162 (374)
T TIGR01365 100 VTKQLKLP--DVRVLEAEYGK--LPDLKKVDF----K-N------DVVFTWNGTTSGVRVPNGDFIPAD--REGLTICDA 162 (374)
T ss_pred HHHhcCCC--CcEEEcCCCCC--CCCHHHcCC----C-C------CEEEecCCCchheecccccccccc--CCCcEEEEc
Confidence 34557772 27777777754 789999983 1 1 267999999999999998766433 589999999
Q ss_pred ccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccc-cccccccCCCCcee
Q 046506 82 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKA-TESKQVVDYKDWQI 160 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~-~~~~~~~~~~~~~~ 160 (310)
..+.+..+++.. .+|++..+.+|+|++|.|.+++.++++.+ .+.-... .|..... ........+.....
T Consensus 163 vSs~g~~~l~~d--------~iDv~~tgsQK~L~~ppGls~v~vs~~Al-~~~~~~~-~y~~~~~~~~~~~~~~~~~~~~ 232 (374)
T TIGR01365 163 TSAAFAQDLDYH--------KLDVVTFSWQKVLGGEGAHGMLILSPRAV-ARLESYT-PAWPLPKIFRLTKGGKLNKKIF 232 (374)
T ss_pred cchhcCCCCChh--------HCcEEEEechhccCCCCceEEEEECHHHH-HHHhhcC-CCCCChhhhccccccchhhhhh
Confidence 998888877642 39999999999999999999999988854 3322111 1211000 00000000000000
Q ss_pred ccCCCc--chHHHHH---HHHHhCHH-HHHHHHHHHHHHHHHHHHHHcCCCCeEEecC-C--Cce-EEEEEEcCCcchhh
Q 046506 161 TLSRRF--RSLKLWF---VLRNYGVA-NLRHFLRSHVNMAKLFERLVGSDKRFEVVFP-R--HFA-VVCFRVSPSAVMDK 230 (310)
Q Consensus 161 ~~~~~~--~~~~~~~---~l~~~~~~-~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~--~~~-~v~~~~~~~~~~~~ 230 (310)
.+..++ ....+++ +++.+..+ |++++.+|+.++++.+++.++++..+.++.. + +++ ++++.+.+..+.
T Consensus 233 ~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~-- 310 (374)
T TIGR01365 233 EGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAID-- 310 (374)
T ss_pred cCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCcccc--
Confidence 111222 1233333 34334454 7999999999999999999999843777642 1 233 345655432100
Q ss_pred hhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 231 LKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
..+++.-..+..++.+.+.++|.....+........+||..+ ...+++|++.+++.|.-+-
T Consensus 311 ---------~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~-G~i~~~di~~l~~~l~~~~ 371 (374)
T TIGR01365 311 ---------ALDEDAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCG-ATVEKSDLECLCPWLDWAF 371 (374)
T ss_pred ---------ccccchhhHHHHHHHHHHHHCCEEEeccccccCCCceEEecC-CcCCHHHHHHHHHHHHHHH
Confidence 000000011235677778778643332222122478999977 4799999999999997654
No 136
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.61 E-value=4.4e-14 Score=128.89 Aligned_cols=179 Identities=14% Similarity=0.122 Sum_probs=115.9
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChh
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPE 92 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~ 92 (310)
++..++|++ ++.||.|++++.+.+.+ |.+|++.... .-...|+++++++|++.|+.|++|.||-+|.+....
T Consensus 144 ~~~y~~d~~-~~~ID~d~l~~~a~~~k-----PklIi~G~S~--y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~ 215 (399)
T PF00464_consen 144 SVPYPVDPD-TGLIDYDELEKLAKEHK-----PKLIICGASS--YPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGL 215 (399)
T ss_dssp EEEEEB-TT-TSSB-HHHHHHHHHHH-------SEEEEE-SS--TSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTS
T ss_pred EEeeeeecC-CCeECHHHHHHHHhhcC-----CCEEEECchh--ccCccCHHHHHHHHHhcCcEEEecccccccceehhe
Confidence 566788864 56999999999998874 6666554332 234578999999999999999999999888776654
Q ss_pred hhhhhcCCCCCCeeeeecccccccccceEEEEEe-------------CchhHHhhh--ccCCccccccccccccccCCCC
Q 046506 93 FRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVK-------------DPSDLVNSL--STNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 93 ~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~-------------~~~~~~~~~--~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
+... +.++|+++++.||+|.+|.| |+++.+ +++ +.+.+ ...|.
T Consensus 216 ~~~P---~~~ADvvt~sThKtl~GPrg-giI~~~~~~~~~~~~~~~~~~~-l~~~I~~avfP~----------------- 273 (399)
T PF00464_consen 216 FPNP---FPYADVVTGSTHKTLRGPRG-GIILTNKGSKNVDKKGKEIDEE-LAEKIDSAVFPG----------------- 273 (399)
T ss_dssp S--G---CCTSSEEEEESSGGG-SSS--EEEEES-SEEEE-TTS-EEEHH-HHHHHHHHHTTT-----------------
T ss_pred ecCc---cccceEEEeeccccccccCc-eEEEEcCCccccCCcccccHHH-HHHHhccccCCC-----------------
Confidence 4322 34699999999999999975 666666 122 11211 11111
Q ss_pred ceeccCCCc-chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEec-CCCceEEEEEEcC
Q 046506 158 WQITLSRRF-RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVF-PRHFAVVCFRVSP 224 (310)
Q Consensus 158 ~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~-~~~~~~v~~~~~~ 224 (310)
.+++-.. ..++++.+++......+.+..++..++|+.|.+.|.+. |++++. ..++.++.+.+.+
T Consensus 274 --~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~-G~~v~~ggTd~H~vlvd~~~ 339 (399)
T PF00464_consen 274 --LQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQER-GFKVVTGGTDNHQVLVDLRS 339 (399)
T ss_dssp --T-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-T-EEGGGS-SSSEEEEEGGG
T ss_pred --cccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhC-CcEEEECCCCCCeEEEEecc
Confidence 1222222 23455566666556677899999999999999999986 999985 3567788787765
No 137
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.61 E-value=5.1e-14 Score=129.76 Aligned_cols=160 Identities=14% Similarity=0.148 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeee
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFS 107 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~ 107 (310)
.++++++|+++ +.+|++++++|++|.+.|+++|+++||++|++++||++|+.+....+. . .++|+++
T Consensus 136 ~e~l~~~l~~~------TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~~~Pl------~-~GaDivv 202 (394)
T PRK09028 136 GEGIRELIRPN------TKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPINSRPF------E-MGVDISI 202 (394)
T ss_pred HHHHHHhcCcC------ceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccccccCCcc------c-cCceEEE
Confidence 47788888765 448999999999999999999999999999999999999876432221 1 2699999
Q ss_pred eecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHH
Q 046506 108 LNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRH 185 (310)
Q Consensus 108 ~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 185 (310)
.|+|||++++.+ .|++ +.++....+..... .+ .|....+..+|..+ .|...+.-
T Consensus 203 ~S~tK~l~Gh~d~~~G~~-~~~~~~~~~l~~~~-~~--------------------~G~~~~p~~a~l~~--rgl~TL~l 258 (394)
T PRK09028 203 QAATKYIVGHSDVMLGTA-TANEKHWDQLREHS-YL--------------------MGQCTSPDDVYLAM--RGLRTLGV 258 (394)
T ss_pred EeCCeEecCCCCEEEEEE-ECCHHHHHHHHHHH-Hh--------------------cCCCCCHHHHHHHH--cccCcHHH
Confidence 999999998832 2333 44443332221100 00 01112344555544 36678999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCeE-EecC-----C-----------CceEEEEEEcC
Q 046506 186 FLRSHVNMAKLFERLVGSDKRFE-VVFP-----R-----------HFAVVCFRVSP 224 (310)
Q Consensus 186 ~~~~~~~~a~~l~~~L~~~~~~~-v~~~-----~-----------~~~~v~~~~~~ 224 (310)
++++..+++..+.+.|++.|.+. |.-| | ..++++|.+..
T Consensus 259 R~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~ 314 (394)
T PRK09028 259 RLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQ 314 (394)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECC
Confidence 99999999999999999999885 4322 1 14688998863
No 138
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.61 E-value=4.3e-14 Score=132.16 Aligned_cols=166 Identities=16% Similarity=0.161 Sum_probs=107.3
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCee
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSF 106 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~ 106 (310)
|+++++++|++. +.+|++++.+|++|.+.|+++|+++|+++|+++++|++|+.+....+ .. .++|++
T Consensus 137 d~~~l~~ai~~~------tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~~p------l~-~gaDiv 203 (427)
T PRK05994 137 DPASFERAITPR------TKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLIRP------IE-HGADIV 203 (427)
T ss_pred CHHHHHHhcCcC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccCCc------cc-cCCcEE
Confidence 689999999764 44888899999999999999999999999999999999976543221 11 269999
Q ss_pred eeecccccccccc-eEEEEEeCch-hHHhhhccCCcccccccccccc--ccC-CC----------CceeccCCCcchHHH
Q 046506 107 SLNAHKWFFTTLD-CCCLWVKDPS-DLVNSLSTNPEYLKNKATESKQ--VVD-YK----------DWQITLSRRFRSLKL 171 (310)
Q Consensus 107 ~~~~hK~l~~p~g-~g~l~v~~~~-~~~~~~~~~~~y~~~~~~~~~~--~~~-~~----------~~~~~~~~~~~~~~~ 171 (310)
+.|+||+++++.+ .|++++.... .+.. ....+++........+ ..+ .. ......|.......+
T Consensus 204 v~S~tK~lgg~~~~~gG~v~~~~~~~~~~--~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A 281 (427)
T PRK05994 204 VHSLTKFLGGHGNSMGGIIVDGGTFDWSK--SGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNA 281 (427)
T ss_pred EEcCccccCCCCCcEEEEEEeCCcccccc--ccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHH
Confidence 9999999998765 5555554221 0000 0000111110000000 000 00 000011222334444
Q ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEE
Q 046506 172 WFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEV 209 (310)
Q Consensus 172 ~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v 209 (310)
|..+ .+...+..++++.++++.++.+.|++.|++.-
T Consensus 282 ~l~~--~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~ 317 (427)
T PRK05994 282 FLIL--TGIETLPLRMQRHSDNALAVAEWLKGHPKVSW 317 (427)
T ss_pred HHHH--cCcccHHHHHHHHHHHHHHHHHHHHhCCCccE
Confidence 4443 46688999999999999999999999998864
No 139
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.61 E-value=7.7e-14 Score=129.66 Aligned_cols=149 Identities=16% Similarity=0.166 Sum_probs=105.2
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCee
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSF 106 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~ 106 (310)
|+++++++|++. +.+|.+.+.+|++|.+.|+++|+++|+++|+++++|++++.+....+ . . .++|++
T Consensus 139 d~~~l~~~i~~~------tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~~~----l--~-~g~Di~ 205 (403)
T PRK07503 139 DPAALKAAISDK------TRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQRP----L--E-LGADLV 205 (403)
T ss_pred CHHHHHHhcCcc------CcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCc----h--h-hCCCEE
Confidence 689999999764 34788888999999999999999999999999999999975533211 1 1 258999
Q ss_pred eeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHH
Q 046506 107 SLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLR 184 (310)
Q Consensus 107 ~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 184 (310)
+.|++|+++++.+ .|+++ .+++...+........ ..+-+...+..|..++ +.+.+.
T Consensus 206 v~S~tK~l~g~gd~~gG~v~-~~~~l~~~l~~~~~~~-------------------~~g~~~s~~~a~l~l~--~L~tl~ 263 (403)
T PRK07503 206 VHSATKYLGGHGDITAGLVV-GGKALADRIRLEGLKD-------------------MTGAVMSPFDAFLLMR--GLKTLA 263 (403)
T ss_pred EccccccccCCCceeEEEEE-cCHHHHHHHHhhhHHh-------------------CcCCCCCHHHHHHHHc--CcchHH
Confidence 9999999998754 56555 5555443321100000 0011223344444443 557788
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCeEEe
Q 046506 185 HFLRSHVNMAKLFERLVGSDKRFEVV 210 (310)
Q Consensus 185 ~~~~~~~~~a~~l~~~L~~~~~~~v~ 210 (310)
.++++..++++.+.+.|++.|.+..+
T Consensus 264 ~r~~~~~~na~~~a~~L~~~p~v~~V 289 (403)
T PRK07503 264 LRMDRHCASAQAVAEWLARHPAVELV 289 (403)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 88999999999999999998887643
No 140
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.60 E-value=1.1e-13 Score=128.53 Aligned_cols=163 Identities=18% Similarity=0.212 Sum_probs=116.0
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCe
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADS 105 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~ 105 (310)
.|+++|+++++++ +.+|.+.+.+|++|.+.|+++|+++|+++|++++||++|+.+....+ . . .++|+
T Consensus 133 ~d~~~l~~~i~~~------tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~~p----l--~-~gaDi 199 (405)
T PRK08776 133 TDPRSLADALAQS------PKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQKP----L--E-FGADL 199 (405)
T ss_pred CCHHHHHHhcCcC------CeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccCCc----c--c-ccCCE
Confidence 4789999998654 44788889999999999999999999999999999999976542211 1 1 25899
Q ss_pred eeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHH
Q 046506 106 FSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANL 183 (310)
Q Consensus 106 ~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 183 (310)
++.|+||++++|.+ .|+++.++++..++..... .+. +-....+..|..+ .+.+++
T Consensus 200 vv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~-~~~--------------------g~~~s~~~a~l~~--~gl~tl 256 (405)
T PRK08776 200 VLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWA-NAL--------------------GLTGSPFDAFLTL--RGLRTL 256 (405)
T ss_pred EEecCceeecCCCCceEEEEEeCCHHHHHHHHHHH-Hhc--------------------CCCCCHHHHHHHH--hhhCcH
Confidence 99999999998865 4666666665433221100 000 0011344455444 356788
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCeEEecCC-----------------CceEEEEEEcC
Q 046506 184 RHFLRSHVNMAKLFERLVGSDKRFEVVFPR-----------------HFAVVCFRVSP 224 (310)
Q Consensus 184 ~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------------~~~~v~~~~~~ 224 (310)
+.++++..+++..+.+.|++.|.+.-+.-| ..++++|.+.+
T Consensus 257 ~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 314 (405)
T PRK08776 257 DARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEG 314 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcC
Confidence 999999999999999999999988643211 14588898864
No 141
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.60 E-value=1.2e-13 Score=128.42 Aligned_cols=163 Identities=15% Similarity=0.205 Sum_probs=112.5
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh--CcEEEeecccccccccChhhhhhhcCCCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF--GIWVHVDAAYAGSACICPEFRHFIDGVEGAD 104 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~--g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D 104 (310)
|+++++++|+++ +.+|++.+++|++|.+.|+++|+++|+++ |+++++|++++.+....+. + .++|
T Consensus 138 d~e~l~~~i~~~------tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~~l------~-~g~D 204 (400)
T PRK06234 138 NLEEVRNALKAN------TKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQRPL------Q-LGAD 204 (400)
T ss_pred CHHHHHHHhccC------CeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCCch------h-hCCc
Confidence 689999999765 34888899999999999999999999997 9999999999766432221 1 1589
Q ss_pred eeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 105 SFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 105 ~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
+++.|++|+++++.. .|+++.+ ++.+.........+.. +........|..++ +...
T Consensus 205 ivv~S~sK~l~g~g~~~gG~v~~~-~~~~~~l~~~~~~~~~-------------------g~~l~p~~a~l~~~--~l~t 262 (400)
T PRK06234 205 VVVHSATKYLNGHGDVIAGFVVGK-EEFINQVKLFGIKDMT-------------------GSVIGPFEAFLIIR--GMKT 262 (400)
T ss_pred EEEeeccccccCCCCceeEEEEec-HHHHHHHHHHHHHHhc-------------------CCCCCHHHHHHHHh--ccCc
Confidence 999999999997753 4665544 4443322110001000 11123334444443 4567
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCeEEec-C-----C-----------CceEEEEEEcC
Q 046506 183 LRHFLRSHVNMAKLFERLVGSDKRFEVVF-P-----R-----------HFAVVCFRVSP 224 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~~~~~v~~-~-----~-----------~~~~v~~~~~~ 224 (310)
++.++++..++++++.+.|++.|.+.-+. | | ..++++|.+.+
T Consensus 263 l~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~ 321 (400)
T PRK06234 263 LQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKG 321 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecC
Confidence 78899999999999999999988875332 2 1 24578888864
No 142
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.59 E-value=5.1e-14 Score=129.31 Aligned_cols=149 Identities=17% Similarity=0.114 Sum_probs=103.0
Q ss_pred cEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeeeeecccccccccce--EE
Q 046506 45 PLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDC--CC 122 (310)
Q Consensus 45 ~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~--g~ 122 (310)
+.+|.+...+|++|.+.|+++|+++|+++|++++||++|+.+....+ .+ .++|+++.|+|||+++|.|+ |+
T Consensus 133 t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~~~p-----~~--~g~Divv~S~sK~l~G~~g~~~G~ 205 (366)
T PRK07582 133 ADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLGQRP-----LE--LGADLVVASDTKALTGHSDLLLGY 205 (366)
T ss_pred ceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCccccCc-----hh--cCCcEEEecccccccCCCCeeEEE
Confidence 34777888899999999999999999999999999999853221111 11 25899999999999988774 66
Q ss_pred EEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHc
Q 046506 123 LWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVG 202 (310)
Q Consensus 123 l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~ 202 (310)
++.++++...+..... .+... .......|.+++ +...++.++++..++++.+.+.|.
T Consensus 206 v~~~~~~l~~~l~~~~-~~~g~--------------------~~~~~~a~l~~r--~l~tl~~R~~~~~~na~~la~~L~ 262 (366)
T PRK07582 206 VAGRDPELMAAVERWR-LLAGA--------------------IPGPFEAWLAHR--SLGTLGLRFARQCANALAVAELLA 262 (366)
T ss_pred EEcCcHHHHHHHHHHH-HHhCC--------------------CCCHHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHHH
Confidence 6665554432221100 11100 112344454444 445688889999999999999999
Q ss_pred CCCCeEEec------CC-----------CceEEEEEEc
Q 046506 203 SDKRFEVVF------PR-----------HFAVVCFRVS 223 (310)
Q Consensus 203 ~~~~~~v~~------~~-----------~~~~v~~~~~ 223 (310)
+.|.+.-+. .| ..++++|.+.
T Consensus 263 ~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~ 300 (366)
T PRK07582 263 GHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA 300 (366)
T ss_pred hCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC
Confidence 999886433 12 3568899885
No 143
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.59 E-value=6.2e-14 Score=129.18 Aligned_cols=149 Identities=17% Similarity=0.234 Sum_probs=106.6
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCe
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADS 105 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~ 105 (310)
.|+++++++|++++ .+|++.+++|++|.+.|+++|+++|+++|++++||++++.+....+ . . .++|+
T Consensus 122 ~d~~~l~~ai~~~t------klV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~p-----~-~-~g~Di 188 (377)
T PRK07671 122 SNLEEVEEAIRPNT------KAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQSP-----I-S-LGADI 188 (377)
T ss_pred CCHHHHHHhcCCCC------eEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCCh-----h-h-hCCeE
Confidence 37899999997653 4888889999999999999999999999999999999875433211 1 1 25899
Q ss_pred eeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHH
Q 046506 106 FSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANL 183 (310)
Q Consensus 106 ~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 183 (310)
++.|++|++++|.+ .|+++++++....+..... .+. +........|..++ +...+
T Consensus 189 vv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~-~~~--------------------g~~~~~~~a~l~~~--~l~tl 245 (377)
T PRK07671 189 VLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQ-NST--------------------GGILGPQDSWLLLR--GLKTL 245 (377)
T ss_pred EEecCcccccCCccceeEEEEeCcHHHHHHHHHHH-Hhh--------------------cCCCCHHHHHHHHc--CcChH
Confidence 99999999998864 4556666654433321110 111 11112344444443 44567
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCeEEe
Q 046506 184 RHFLRSHVNMAKLFERLVGSDKRFEVV 210 (310)
Q Consensus 184 ~~~~~~~~~~a~~l~~~L~~~~~~~v~ 210 (310)
..++++.+++++.+.+.|++.|++.-+
T Consensus 246 ~~R~~~~~~na~~la~~L~~~~~v~~v 272 (377)
T PRK07671 246 GIRMEEHETNSRAIAEFLNNHPAVNKV 272 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 779999999999999999999988543
No 144
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.59 E-value=6.4e-14 Score=129.17 Aligned_cols=149 Identities=15% Similarity=0.158 Sum_probs=105.0
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCe
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADS 105 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~ 105 (310)
.|+++++++++++ +.+|.+.+++|++|.+.|+++|+++||++|++++||++++.+....+ .. .++|+
T Consensus 122 ~d~e~l~~ai~~~------t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~p------~~-~gaDi 188 (380)
T PRK06176 122 SDLSQIKKAIKPN------TKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQNP------LL-LGADI 188 (380)
T ss_pred CCHHHHHHhcCcC------ceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCCc------cc-cCCCE
Confidence 4789999998764 34788889999999999999999999999999999999976533211 11 26999
Q ss_pred eeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHH
Q 046506 106 FSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANL 183 (310)
Q Consensus 106 ~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 183 (310)
+++|+||++++|.+ .|++..++++...+..... .+ .+........|..+ .|...+
T Consensus 189 vv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~-~~--------------------~G~~~~~~~~~l~~--~gl~tl 245 (380)
T PRK06176 189 VVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQ-NA--------------------IGGVLGPQDSWLLQ--RGIKTL 245 (380)
T ss_pred EEecCceeccCCccceeeEEEecHHHHHHHHHHHH-HH--------------------hcCCCCHHHHHHHH--hccCcH
Confidence 99999999998764 5555555554332221000 00 01111222334333 355677
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCeEEe
Q 046506 184 RHFLRSHVNMAKLFERLVGSDKRFEVV 210 (310)
Q Consensus 184 ~~~~~~~~~~a~~l~~~L~~~~~~~v~ 210 (310)
..++++.++++..+.+.|++.|.+.-+
T Consensus 246 ~~R~~~~~~~a~~la~~L~~~p~v~~v 272 (380)
T PRK06176 246 GLRMEAHQKNALCVAEFLEKHPKVEKV 272 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeEE
Confidence 889999999999999999998888543
No 145
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.59 E-value=7.2e-14 Score=128.42 Aligned_cols=163 Identities=18% Similarity=0.245 Sum_probs=112.4
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCe
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADS 105 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~ 105 (310)
.|+++++++|+++ +.+|.+.+++|++|.+.++++|+++|++||+++++|.+++.+....+. . .++|+
T Consensus 124 ~d~~~l~~~i~~~------tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p~-----~--~g~di 190 (366)
T PRK08247 124 ASLKAIEQAITPN------TKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPL-----E--EGADI 190 (366)
T ss_pred CCHHHHHHhcccC------ceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCch-----h--cCCcE
Confidence 3789999999765 348888889999999999999999999999999999999654432221 1 25899
Q ss_pred eeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHH
Q 046506 106 FSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANL 183 (310)
Q Consensus 106 ~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 183 (310)
++.|++|+++++.+ .|++..+++....+..... .+. +........|.+++ +...+
T Consensus 191 ~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~-~~~--------------------g~~~s~~~a~l~~~--~l~tl 247 (366)
T PRK08247 191 VIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQ-NAA--------------------GAVLSPFDSWLLIR--GMKTL 247 (366)
T ss_pred EEeecceeccCCCceeeeEEecChHHHHHHHHHHH-Hhc--------------------CCCCChHHHHHHHh--ccCcH
Confidence 99999999997654 3444443343332221100 000 00112233444443 44567
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCeEEec-CCCceEEEEEEcC
Q 046506 184 RHFLRSHVNMAKLFERLVGSDKRFEVVF-PRHFAVVCFRVSP 224 (310)
Q Consensus 184 ~~~~~~~~~~a~~l~~~L~~~~~~~v~~-~~~~~~v~~~~~~ 224 (310)
..++++..++++.+.+.|++.|++..+. |+..++++|.+..
T Consensus 248 ~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~~ 289 (366)
T PRK08247 248 ALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQD 289 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEECC
Confidence 7888888999999999999999987443 4478888997753
No 146
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.59 E-value=1.2e-13 Score=127.61 Aligned_cols=246 Identities=14% Similarity=0.140 Sum_probs=145.6
Q ss_pred ceecCCCCCCEEEEecCC-CCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEE
Q 046506 3 AQIVGIDVKNFRAIKTTK-SSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVH 78 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~-~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~ 78 (310)
++..|.. ++.+|++. .+.+.+|++++++++++. +.++++++.+|++|.+.+ +++|+++|+++|++++
T Consensus 124 ~~~~g~~---~~~v~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii 194 (380)
T PRK06225 124 ASRFGAE---VIEVPIYSEECNYKLTPELVKENMDEN------TRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLL 194 (380)
T ss_pred HHHhCce---EEeeccccccCCccCCHHHHHhhcCCC------ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEE
Confidence 3456666 88888742 224689999999998754 346777788899999765 8899999999999999
Q ss_pred eecccccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 79 VDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 79 vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
+|++++.+......... .. .....+..+++|+++.| ..+|+++.+ +..++..... .....
T Consensus 195 ~De~y~~~~~~~~~~~~-~~--~~~~i~~~s~SK~~g~~G~RiG~i~~~-~~l~~~~~~~----~~~~~----------- 255 (380)
T PRK06225 195 HDCTYRDFAREHTLAAE-YA--PEHTVTSYSFSKIFGMAGLRIGAVVAT-PDLIEVVKSI----VINDL----------- 255 (380)
T ss_pred EehhHHHHhccCCchhh-cC--CCCEEEEeechhhcCCccceeEEEecC-HHHHHHHHHH----Hhccc-----------
Confidence 99998533211110000 00 12345667889999644 236888764 4343322110 00000
Q ss_pred ceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEe-cCCCceEEEEEEcCCcchhhhhhhhc
Q 046506 158 WQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVV-FPRHFAVVCFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~-~~~~~~~v~~~~~~~~~~~~~~~~~~ 236 (310)
..+ ......+..+++. ....+++..+...++.+.+.+.|++++++.+. .++..+.+.+.+.+...
T Consensus 256 ---~~~-~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~--------- 321 (380)
T PRK06225 256 ---GTN-VIAQEAAIAGLKV-KDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAGI--------- 321 (380)
T ss_pred ---CCC-HHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEcccccC---------
Confidence 000 0111112222221 22334445555566677788888877775432 24455666665543211
Q ss_pred cccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE----CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 237 NSLLSEEERINEFNRELLESINASGKAYMTHAVL----GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
+ ..++.+.|.+.|. ++.+... .+.+.+|+|+. .++|+++.++++|+++++.++.
T Consensus 322 -----~-------~~~l~~~l~~~gi-~v~~g~~~~~~~~~~~iR~s~~---~~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 322 -----D-------PEDLVEYLLERKI-FVRQGTYTSKRFGDRYIRVSFS---IPREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred -----C-------HHHHHHHHHHCCE-EEcCCcccCcCCCCceEEEEeC---CCHHHHHHHHHHHHHHHHHhhc
Confidence 0 1356677777764 4443321 13468999954 3689999999999999987764
No 147
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.58 E-value=1.6e-13 Score=127.72 Aligned_cols=242 Identities=12% Similarity=-0.005 Sum_probs=148.2
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|+. ++.+|.++++.+.+|++++++++.+. +.+++++.++|++|.+.+ +++|+++|++||+++++
T Consensus 134 ~~~~G~~---~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~ 204 (399)
T PRK07681 134 IQMAGAT---SYYMPLKKENDFLPDLELIPEEIADK------AKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVH 204 (399)
T ss_pred HHhcCCE---EEEEecCCCCCCcCCHHHHHHhcccc------ceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEE
Confidence 4566776 99999987555789999999988653 347777778999999988 77899999999999999
Q ss_pred ecccccccccChhhhhhh--cCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 80 DAAYAGSACICPEFRHFI--DGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~--~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
|.+++............. .....-.++..|.+|.++.| .-+|+++. ++..+....... .+....
T Consensus 205 De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~-~~~l~~~~~~~~-~~~~~~----------- 271 (399)
T PRK07681 205 DFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIG-NEEIVRALTQFK-SNTDYG----------- 271 (399)
T ss_pred eccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEec-CHHHHHHHHHHH-hhcccC-----------
Confidence 999975443221111111 11111235667999998744 33777764 454443221111 000000
Q ss_pred CceeccCCCcchHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhh
Q 046506 157 DWQITLSRRFRSLKLWFVLRNY--GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~ 234 (310)
...+...++...+ +...+++..+...++.+.+.+.|.+. ++++..+..+..+.+.+.+..
T Consensus 272 ---------~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~~g~f~~~~l~~~~-------- 333 (399)
T PRK07681 272 ---------VFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF-GWNVDKPAGSMFVWAEIPKGW-------- 333 (399)
T ss_pred ---------CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeeeEEEEECCCCC--------
Confidence 0111112222222 23455666677778888899999886 777654545555555554310
Q ss_pred hccccchhHHHHHHHHHHHHHHHHh-cCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESINA-SGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
+ ..++...+.+ .|.....+.... +.+++|+++. .++++++.+++.|++.+
T Consensus 334 -------~-------~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~---~~~~~~~~~l~~l~~~~ 386 (399)
T PRK07681 334 -------T-------SLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALV---QDEEVLQQAVENIRNSG 386 (399)
T ss_pred -------C-------HHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEec---CCHHHHHHHHHHHHHhc
Confidence 0 1356666666 554433332222 3468999966 35899999999998843
No 148
>PRK07324 transaminase; Validated
Probab=99.58 E-value=2.1e-13 Score=125.68 Aligned_cols=243 Identities=9% Similarity=0.077 Sum_probs=145.2
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|.. ++.+|+++.+.+.+|++++++++++. +.++++++++|++|.+.+ +++|+++|++||+++++
T Consensus 121 ~~~~g~~---v~~v~~~~~~~~~~d~~~l~~~~~~~------~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~ 191 (373)
T PRK07324 121 PESLGAE---VDYWQLKEENGWLPDLDELRRLVRPN------TKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLS 191 (373)
T ss_pred HHHcCCE---EEEEecccccCCCCCHHHHHHhCCCC------CcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 3456776 99999987545678999999988654 347888899999999988 89999999999999999
Q ss_pred ecccccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCc
Q 046506 80 DAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDW 158 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 158 (310)
|+++........ ...... ...-.++..|.+|.++.| .-+|+++. ++..+....... .+...
T Consensus 192 De~y~~l~~~~~-~~s~~~-~~~~~I~~~s~SK~~~~~G~RiG~i~~-~~~li~~~~~~~-~~~~~-------------- 253 (373)
T PRK07324 192 DEVYRPLDEDGS-TPSIAD-LYEKGISTNSMSKTYSLPGIRVGWIAA-NEEVIDILRKYR-DYTMI-------------- 253 (373)
T ss_pred EccccccccCCC-CCChhh-ccCCEEEEecchhhcCCccceeEEEec-CHHHHHHHHHHh-CcEEe--------------
Confidence 999854332111 111111 111135567999998755 23577765 454443221111 11000
Q ss_pred eeccCCCcchHHHHHHHHHh-C-HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhc
Q 046506 159 QITLSRRFRSLKLWFVLRNY-G-VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~ 236 (310)
+ ...+..+++...+ . ...++...+...++.+.+.+.|.+.+++....+.......+.+....
T Consensus 254 ---~---~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~~---------- 317 (373)
T PRK07324 254 ---C---AGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVDM---------- 317 (373)
T ss_pred ---c---CChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCCC----------
Confidence 0 0112222222222 1 22345555666677778888888777777664433333344443210
Q ss_pred cccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 237 NSLLSEEERINEFNRELLESIN-ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+ ..++.+++. +.|.....+......+++|+|+. ++++.++..++.|++.+++
T Consensus 318 -----~-------~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~---~~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 318 -----P-------SEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYC---CDTETLKKGLKKLSEFLRE 370 (373)
T ss_pred -----C-------HHHHHHHHHHhcCEEEECccccCCCCeEEEEec---CCHHHHHHHHHHHHHHHHh
Confidence 0 134566655 44544444333444579999965 3577888888888776653
No 149
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.58 E-value=9.2e-14 Score=129.02 Aligned_cols=174 Identities=12% Similarity=0.133 Sum_probs=120.9
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
..|+. +++++. .|+++++++|++++ .+|++.+++|++|.+.|+++|+++|+++|++++||++++
T Consensus 132 ~~G~~---v~~vd~-------~d~~~l~~ai~~~t------klV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a 195 (403)
T PRK07810 132 RWGVE---TVFVDG-------EDLSQWEEALSVPT------QAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFA 195 (403)
T ss_pred HcCcE---EEEECC-------CCHHHHHHhcCcCc------eEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCC
Confidence 34555 666653 37899999998754 488889999999999999999999999999999999997
Q ss_pred cccccChhhhhhhcCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceecc
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITL 162 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 162 (310)
.+....+. . .++|+++.|+||+++++.. .|+++.+ +..+...+. .+....
T Consensus 196 ~~~~~~~~------~-~gaDivv~S~tK~l~g~g~~~gG~v~~~-~~~~~~~l~---~~~~~~----------------- 247 (403)
T PRK07810 196 TPLLQRGL------P-LGADVVVYSGTKHIDGQGRVLGGAILGD-REYIDGPVQ---KLMRHT----------------- 247 (403)
T ss_pred ccccCChh------h-cCCcEEEccCCceecCCcCceeEEEEeC-hHHHHHHHH---HHHHHh-----------------
Confidence 66443221 1 1589999999999987543 4555544 433322110 011100
Q ss_pred CCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEec-C-----C-----------CceEEEEEEcC
Q 046506 163 SRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVF-P-----R-----------HFAVVCFRVSP 224 (310)
Q Consensus 163 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~-~-----~-----------~~~~v~~~~~~ 224 (310)
+........|..++ +...+..++++..+++.++.+.|++.|++.-+. | | ..++++|.+..
T Consensus 248 g~~~s~~~a~l~l~--~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~ 324 (403)
T PRK07810 248 GPALSAFNAWVLLK--GLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDA 324 (403)
T ss_pred CCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence 11123344444443 567889999999999999999999999886432 2 2 25688898864
No 150
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.58 E-value=1.6e-13 Score=125.90 Aligned_cols=229 Identities=14% Similarity=0.132 Sum_probs=139.2
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|+. ++.+|.++ ++.+|++++++.+++. +.++++++++|++|.+.|++++.++|+++|+++++|++
T Consensus 128 ~~~~g~~---~~~~~~~~--~~~~~~~~l~~~~~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~ 196 (361)
T PRK00950 128 AKAHGAK---PVYAKREE--DFSLDVDSVLNAITEK------TKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEA 196 (361)
T ss_pred HHHcCCE---EEEeecCC--CCCcCHHHHHHHhccC------CCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECc
Confidence 3456766 88888664 3589999999998643 34677788999999999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceec
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
|+... . ........... --++..|.+|.++.| .-+|+++. ++............+.
T Consensus 197 y~~~~-~-~~~~~~~~~~~-~vi~~~S~SK~~g~~GlRiG~~~~-~~~~~~~~~~~~~~~~------------------- 253 (361)
T PRK00950 197 YVEFA-E-YDYTPLALEYD-NLIIGRTFSKVFGLAGLRIGYGFV-PEWLIDYYMRAKTPFS------------------- 253 (361)
T ss_pred hhhhC-c-cchHHHHHhcC-CEEEEEeehHhhcCchhhcchhcC-CHHHHHHHHHhcCCCC-------------------
Confidence 96443 1 11111111111 124557899998755 23566654 3433322211111110
Q ss_pred cCCCcchHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccc
Q 046506 162 LSRRFRSLKLWFVLRNYG-VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLL 240 (310)
Q Consensus 162 ~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
...+...+++..+. .+.+++..++..++.+++.+.|. +.+. ++..+.+.+.+.+.+
T Consensus 254 ----~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~----~~~~-~~~~~~i~~~~~~~~-------------- 310 (361)
T PRK00950 254 ----LTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP----FKVY-PSEANFVLVDVTPMT-------------- 310 (361)
T ss_pred ----CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC----eeEC-CCcceEEEEECCCCC--------------
Confidence 01222233333332 23455666666666666666654 4443 456666766663211
Q ss_pred hhHHHHHHHHHHHHHHHHhcCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 241 SEEERINEFNRELLESINASGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 241 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
..++.+.|.+.|.....+..+. +.+++|+|+. +++++++++++|++++
T Consensus 311 ---------~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~----~~~~~~~l~~~L~~il 360 (361)
T PRK00950 311 ---------AKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG----TFEENERFLEILKEIV 360 (361)
T ss_pred ---------HHHHHHHHHHCCEEEeeCCccCCCCCCeEEEECC----CHHHHHHHHHHHHHHh
Confidence 1456777777764433323222 3568999954 5779999999998864
No 151
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.58 E-value=1.6e-13 Score=126.60 Aligned_cols=163 Identities=19% Similarity=0.238 Sum_probs=116.8
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCe
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADS 105 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~ 105 (310)
.|+++++++|+++ +.+|++..++|++|.+.|+++|+++|+++|+++++|++++.+....+. . .++|+
T Consensus 124 ~d~~~l~~ai~~~------tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~pl------~-~gaDi 190 (382)
T TIGR02080 124 GDEQALRAALAQK------PKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQNPL------A-LGADL 190 (382)
T ss_pred CCHHHHHHhcCcC------ceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccCCch------h-hCCCE
Confidence 4789999999764 348888899999999999999999999999999999999765432221 1 15899
Q ss_pred eeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHH
Q 046506 106 FSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANL 183 (310)
Q Consensus 106 ~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 183 (310)
++.|++|+++++.+ .|++.+++++...+..... .+.+ .....+..|..++ +.+.+
T Consensus 191 vv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~-~~~g--------------------~~~sp~~a~l~lr--~l~tl 247 (382)
T TIGR02080 191 VLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWA-NNLG--------------------VTGGAFDSYLTLR--GLRTL 247 (382)
T ss_pred EEeecceeccCCCCceeEEEEeCCHHHHHHHHHHH-HccC--------------------CCCCHHHHHHHHc--ccchH
Confidence 99999999998766 6666666665433221110 1111 1123344555544 56788
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCeEEec-C-----C-----------CceEEEEEEcC
Q 046506 184 RHFLRSHVNMAKLFERLVGSDKRFEVVF-P-----R-----------HFAVVCFRVSP 224 (310)
Q Consensus 184 ~~~~~~~~~~a~~l~~~L~~~~~~~v~~-~-----~-----------~~~~v~~~~~~ 224 (310)
..++++..+++..+.+.|++.|.++-+. | | ..++++|.+.+
T Consensus 248 ~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 305 (382)
T TIGR02080 248 VARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKG 305 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecC
Confidence 8889999999999999999999886432 2 1 14588898864
No 152
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.58 E-value=8e-14 Score=128.71 Aligned_cols=173 Identities=16% Similarity=0.249 Sum_probs=117.4
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
.+|+. +++++.+ |++++++++++. +.+|++..++|++|.+.|+++|+++|+++|++++||++++
T Consensus 116 ~~g~~---v~~v~~~-------d~~~l~~~i~~~------tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~ 179 (380)
T TIGR01325 116 RFGIE---VSFVDPT-------DLNAWEAAVKPN------TKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFA 179 (380)
T ss_pred HhCCE---EEEECCC-------CHHHHHHhcCCC------ceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCc
Confidence 34555 6666543 578898888654 4588888999999999999999999999999999999997
Q ss_pred cccccChhhhhhhcCCCCCCeeeeeccccccccc-ceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccC
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLS 163 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 163 (310)
.+....+ . . .++|+++.|+||+++++. ..|++++.++..++.... +... .+
T Consensus 180 ~~~~~~p----l--~-~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~----~~~~-----------------~g 231 (380)
T TIGR01325 180 TPVLQQP----L--K-LGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAV----YLRH-----------------TG 231 (380)
T ss_pred ccccCCc----h--h-hCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHH----HHHh-----------------hC
Confidence 5433211 1 1 158999999999999874 334444555544332211 1000 01
Q ss_pred CCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC------C-----------CceEEEEEEc
Q 046506 164 RRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP------R-----------HFAVVCFRVS 223 (310)
Q Consensus 164 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~------~-----------~~~~v~~~~~ 223 (310)
.......+|.+++ +...+..++++..++++++.+.|+++|++.-+.- | ..++++|.+.
T Consensus 232 ~~~~p~~a~~~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~ 306 (380)
T TIGR01325 232 PAMSPFNAWVLLK--GLETLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA 306 (380)
T ss_pred CCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC
Confidence 1122233444443 5567788999999999999999999988764321 1 1458888886
No 153
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.58 E-value=1.6e-13 Score=126.27 Aligned_cols=159 Identities=14% Similarity=0.224 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeeee
Q 046506 29 DSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSL 108 (310)
Q Consensus 29 ~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~ 108 (310)
++++++|+++ +.+|++++++|++|.+.||++|+++|+++|++++||++|+.+....+. . .++|+++.
T Consensus 126 e~l~~~i~~~------tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~pl------~-~gaDivv~ 192 (377)
T TIGR01324 126 EDIATLIQPN------TKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFKPL------E-HGVDISIQ 192 (377)
T ss_pred HHHHHhcCCC------ceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCcc------c-cCceEEEe
Confidence 7888888765 448999999999999999999999999999999999999877653221 1 26999999
Q ss_pred ecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHH
Q 046506 109 NAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHF 186 (310)
Q Consensus 109 ~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 186 (310)
|+|||++++.+ .|+++ .+++.+.+.... .+..+ ....+...|..++ +.+.+..+
T Consensus 193 S~tK~l~G~~d~~gG~v~-~~~~~~~~l~~~--~~~~G-------------------~~l~p~~a~~~~r--gl~tl~~R 248 (377)
T TIGR01324 193 AGTKYLVGHSDIMIGTVV-ANARTWDQLREH--SYLMG-------------------QMVDADDAYTTLR--GLRTLGVR 248 (377)
T ss_pred cCceeccCCCCceEEEEE-eCHHHHHHHHHH--HHHhC-------------------CCCCHHHHHHHHh--hhhhHHHH
Confidence 99999998865 35454 444333322110 11111 1123344555554 45678888
Q ss_pred HHHHHHHHHHHHHHHcCCCCeE-EecC-----C-----------CceEEEEEEcC
Q 046506 187 LRSHVNMAKLFERLVGSDKRFE-VVFP-----R-----------HFAVVCFRVSP 224 (310)
Q Consensus 187 ~~~~~~~a~~l~~~L~~~~~~~-v~~~-----~-----------~~~~v~~~~~~ 224 (310)
+++.++++..+.+.|++.|.+. +.-| | ..++++|.+.+
T Consensus 249 ~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~ 303 (377)
T TIGR01324 249 LKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQR 303 (377)
T ss_pred HHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECC
Confidence 9999999999999999988884 4322 1 25688898864
No 154
>PLN02242 methionine gamma-lyase
Probab=99.58 E-value=2.2e-13 Score=126.91 Aligned_cols=150 Identities=13% Similarity=0.125 Sum_probs=102.1
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCee
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSF 106 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~ 106 (310)
|+++++++|++. ++.+|++.+.+|++|.+.|+++|+++|++||++++||.+++.... .+. .+ ++|++
T Consensus 151 d~e~l~~~i~~~-----~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~-~~~------~~-g~div 217 (418)
T PLN02242 151 DLEAVKKAVVPG-----KTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVL-SPA------RL-GADVV 217 (418)
T ss_pred CHHHHHHhcCcC-----CCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCC-CHH------Hc-CCcEE
Confidence 789999999653 145888999999999999999999999999999999999953322 111 11 48999
Q ss_pred eeecccccccccce-EEEEEeCchhHHhhhccCCc-cccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHH
Q 046506 107 SLNAHKWFFTTLDC-CCLWVKDPSDLVNSLSTNPE-YLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLR 184 (310)
Q Consensus 107 ~~~~hK~l~~p~g~-g~l~v~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 184 (310)
+.|++|+++++... |.+++.+++.+......... +. ..+. ......+| +...+...+.
T Consensus 218 v~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~-----------------~~g~-~~~~~~A~--l~~~~l~tl~ 277 (418)
T PLN02242 218 VHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGALM-----------------LLGP-TMNPKVAF--ELSERLPHLS 277 (418)
T ss_pred EEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhh-----------------ccCC-CCCHHHHH--HHHcCCCcHH
Confidence 99999999877543 33444555444332211100 00 0111 11222223 3334555777
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCeEEe
Q 046506 185 HFLRSHVNMAKLFERLVGSDKRFEVV 210 (310)
Q Consensus 185 ~~~~~~~~~a~~l~~~L~~~~~~~v~ 210 (310)
.++++..++++++.+.|.++ ++++.
T Consensus 278 ~r~~~~~~~a~~la~~L~~~-~~~V~ 302 (418)
T PLN02242 278 LRMKEHCRRAMEYAKRMKEL-GLKVI 302 (418)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCEEE
Confidence 88899999999999999998 57776
No 155
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.58 E-value=2.8e-13 Score=126.21 Aligned_cols=248 Identities=11% Similarity=0.105 Sum_probs=149.8
Q ss_pred ceecCCCCCCEEEEecC---CCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcE
Q 046506 3 AQIVGIDVKNFRAIKTT---KSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIW 76 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~---~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~ 76 (310)
++.+|.. ++.|+++ +++++.+|+++|++++++. +.++++++++|++|.+.+ +++|+++|++||++
T Consensus 143 ~~~~g~~---v~~v~~~~~~~~~~~~~d~~~l~~~~~~~------~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~ 213 (405)
T PRK06207 143 VEFFEGE---MVPVQLDYLSADKRAGLDLDQLEEAFKAG------VRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGAT 213 (405)
T ss_pred HHHcCCE---EEEEeccccCcccCCCcCHHHHHHhhhhc------CeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 3456666 8888876 2234689999999999764 347888889999999987 77899999999999
Q ss_pred EEeecccccccccChhhhhhhcCCC-CCC--eeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccc
Q 046506 77 VHVDAAYAGSACICPEFRHFIDGVE-GAD--SFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQV 152 (310)
Q Consensus 77 l~vD~a~~~~~~~~~~~~~~~~~~~-~~D--~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~ 152 (310)
+++|.+++-..+....+.. ...+. ..| ++..|+.|.++.| .-+|+++. ++..+....... .+.....
T Consensus 214 iI~De~Y~~~~~~~~~~~~-~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~-~~~l~~~~~~~~-~~~~~~~------ 284 (405)
T PRK06207 214 VIVDQLYSRLLYDGTSYTH-LRALPIDPENVITIMGPSKTESLSGYRLGVAFG-SPAIIDRMEKLQ-AIVSLRA------ 284 (405)
T ss_pred EEEeccccccccCCCCCCc-hhcCCCCcCcEEEEecchhhccCcccceEEEEc-CHHHHHHHHHHH-hHhccCC------
Confidence 9999998754432211111 11110 011 5778999999855 22777754 444433321111 1110000
Q ss_pred cCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhh
Q 046506 153 VDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLK 232 (310)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~ 232 (310)
..+....+...++ -+...+++..++..+..+.+.+.|.+++++++..+..+..+.+.+++...
T Consensus 285 -----------~~~~q~a~~~~l~-~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~~~----- 347 (405)
T PRK06207 285 -----------AGYSQAVLRTWFS-EPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRLAV----- 347 (405)
T ss_pred -----------CHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCcccCC-----
Confidence 0011112222221 12234677777777888889999988778876534345556665543110
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeEE--CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 233 TKYENSLLSEEERINEFNRELLESIN-ASGKAYMTHAVL--GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+ ..++.+.+. +.|.....+... .+.+++|+|+.. ++++++..++.|.+.+++.
T Consensus 348 ---------~-------~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~---~~~~l~~al~rl~~~l~~~ 403 (405)
T PRK06207 348 ---------S-------LHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ---DHAAAVAAAERIAQLIERY 403 (405)
T ss_pred ---------C-------HHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecC---CHHHHHHHHHHHHHHHHHh
Confidence 0 134666665 455544433322 235799999763 5788888888888877654
No 156
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.57 E-value=4.4e-13 Score=124.33 Aligned_cols=242 Identities=13% Similarity=0.111 Sum_probs=145.6
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD 80 (310)
...|+. ++++|.++ ++.+|+++|+++|++. +.++++++++|++|.+.| +++|+++|++||+++++|
T Consensus 131 ~~~g~~---~~~v~~~~--~~~~d~~~l~~~i~~~------~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~D 199 (389)
T PRK05957 131 TMAGCQ---PILVPTDD--NYQLQPEAIEQAITPK------TRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISD 199 (389)
T ss_pred HhcCCE---EEEeecCC--CCCcCHHHHHHhcCcC------ceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEe
Confidence 345666 88898874 4589999999999754 347888889999999988 889999999999999999
Q ss_pred cccccccccChhhhhhhc--CCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 81 AAYAGSACICPEFRHFID--GVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~--~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
.+++........+..... ....--+++.|..|.++.| | +|++++.+ ..++...... .+.....
T Consensus 200 e~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~-GlRiG~~~~~~-~~~~~~~~~~-~~~~~~~---------- 266 (389)
T PRK05957 200 EAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFA-SWRIGYMVIPI-HLLEAIKKIQ-DTILICP---------- 266 (389)
T ss_pred ccchhccCCCCCccChhhCCCccCcEEEEecchhhccCc-cceeEEEecCH-HHHHHHHHHH-hhcccCC----------
Confidence 998644322111101000 1011225567888988644 5 78887643 3332221111 0000000
Q ss_pred CceeccCCCcchHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceE-EEEEEcCCcchhhhhh
Q 046506 157 DWQITLSRRFRSLKLWFVLRNY--GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAV-VCFRVSPSAVMDKLKT 233 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~-v~~~~~~~~~~~~~~~ 233 (310)
.......+...+ +.+.+++..++..++.+.+.+.|++++++..+.++..+. +.+.+.+. .
T Consensus 267 ----------~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~~-~------ 329 (389)
T PRK05957 267 ----------PVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNTD-L------ 329 (389)
T ss_pred ----------CcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCCCC-C------
Confidence 111122222223 234567777778888888999998877752233555443 33444321 1
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHh-cCcEEEEEeEE--CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 234 KYENSLLSEEERINEFNRELLESINA-SGKAYMTHAVL--GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~--~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+ ..++.+.+.+ .|....++... .+.+++|+|+.. .++++++..++.|.+.++.
T Consensus 330 --------~-------~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~--~~~~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 330 --------N-------DFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGA--LQKATAKEGIERLVQGLKT 385 (389)
T ss_pred --------C-------hHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 0 1456777764 55443333322 224689999763 4677888888877776654
No 157
>PRK10534 L-threonine aldolase; Provisional
Probab=99.56 E-value=8.6e-14 Score=126.30 Aligned_cols=227 Identities=15% Similarity=0.052 Sum_probs=132.9
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHH---HHHHHHHhCcEEEeeccccccccc
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKP---LCDVAKQFGIWVHVDAAYAGSACI 89 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~---I~~l~~~~g~~l~vD~a~~~~~~~ 89 (310)
++.++.++ ++.+|+++|++++++++.....+.+|++.. +.+|++.|.++ |+++|++||++++||+|+..+...
T Consensus 100 ~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~lv~l~n--p~~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~ 175 (333)
T PRK10534 100 PQPIDAAA--DGTLPLDKVAAKIKPDDIHFARTRLLSLEN--THNGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVV 175 (333)
T ss_pred EEeecCCC--CCCCCHHHHHHhhcccCcCcccceEEEEec--CCCCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHH
Confidence 55666654 468999999999965311111133555543 33599888665 567899999999999997522110
Q ss_pred --ChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcc
Q 046506 90 --CPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFR 167 (310)
Q Consensus 90 --~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (310)
...... . ....|.++++++|.++.+ .|++.+.+++.+.........+.. +-...
T Consensus 176 ~~~~~~~~-~--~~~~~~~~~s~SK~~~~~--~G~~~~~~~~~i~~~~~~~~~~~~-------------------~~~~~ 231 (333)
T PRK10534 176 AYGCELKE-I--TQYCDSFTICLSKGLGTP--VGSLLVGNRDYIKRARRWRKMTGG-------------------GMRQA 231 (333)
T ss_pred HcCCCHHH-H--HhcCCEEEEEeEcCCCCc--ccceEEcCHHHHHHHHHHHHHhCC-------------------chhhH
Confidence 111111 1 123577778999988876 564445666554332111110000 00011
Q ss_pred hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHH
Q 046506 168 SLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERIN 247 (310)
Q Consensus 168 ~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (310)
++...+++..+ +...+.+++..+.++++.+.|.++ |+++. ++.++++.+++.+.+
T Consensus 232 ~~~~a~~~~~l--~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~~nfv~~~~~~~~--------------------- 286 (333)
T PRK10534 232 GILAAAGLYAL--KHNVARLQEDHDNAAWLAEQLREA-GADVM-RQDTNMLFVRVGEEQ--------------------- 286 (333)
T ss_pred HHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHhC-CCccC-CCCceEEEEECCchh---------------------
Confidence 12222222222 112344445556678899999987 88876 457887777664311
Q ss_pred HHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 248 EFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 248 ~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
..++.+.|.++|.+. .+. ..+|++.+ +.+|+|+++.++++|++++
T Consensus 287 --~~~~~~~l~~~gi~v-~~~-----~~~rl~~~-~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 287 --AAALGEYMRERNVLI-NAS-----PIVRLVTH-LDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred --HHHHHHHHHHcCeee-cCC-----ceEEEEEE-eCCCHHHHHHHHHHHHHHh
Confidence 135667777887544 322 25799854 5689999999999998765
No 158
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.56 E-value=5.1e-13 Score=123.94 Aligned_cols=247 Identities=13% Similarity=0.158 Sum_probs=144.9
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++.+|+. ++.+|.+++ ++.+|+++|++++.+... .+.++++++++|++|.+.+ +++|+++|++||+++++
T Consensus 132 ~~~~g~~---~~~~~~~~~-~~~~d~~~l~~~~~~~~~---~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~ 204 (391)
T PRK07309 132 VNLVGAE---IVEIDTTEN-DFVLTPEMLEKAILEQGD---KLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVIS 204 (391)
T ss_pred HHHcCCE---EEEEecCCc-CCcCCHHHHHHHhhccCC---CeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEE
Confidence 4566776 899998764 367999999999975311 2457777788999999765 88999999999999999
Q ss_pred ecccccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCc
Q 046506 80 DAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDW 158 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 158 (310)
|++++..................--++..|.+|.++.| .-+|+++. +++.+....... .+....
T Consensus 205 D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~-~~~~~~~~~~~~-~~~~~~------------- 269 (391)
T PRK07309 205 DEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFA-PAEFTAQLIKSH-QYLVTA------------- 269 (391)
T ss_pred EccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEe-CHHHHHHHHHHH-hhcccC-------------
Confidence 99987554322111111100011126778999998755 23566654 444443332111 111110
Q ss_pred eeccCCCcchHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceE-EEEEEcCCcchhhhhhhh
Q 046506 159 QITLSRRFRSLKLWFVLRNY--GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAV-VCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~-v~~~~~~~~~~~~~~~~~ 235 (310)
...+...++.+.+ +........++..+..+++.+.|.+. ++.+. +|..+. +.+.+++..
T Consensus 270 -------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~p~gg~~~~~~l~~~~--------- 331 (391)
T PRK07309 270 -------ATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDL-GFKII-KPDGAFYIFAKIPAGY--------- 331 (391)
T ss_pred -------CChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHC-CCeec-CCCeeEEEEEECCCCC---------
Confidence 0111112222222 22223444556667778888888876 77765 344443 333443210
Q ss_pred ccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeE-E--CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESIN-ASGKAYMTHAV-L--GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~-~--~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
..-..++.+.+. +.| +.+.+.. + .+.+++|+++.. ++++++..++.|++.++++
T Consensus 332 -----------~~~~~~~~~~l~~~~g-v~v~pg~~f~~~~~~~iRi~~~~---~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 332 -----------NQDSFKFLQDFARKKA-VAFIPGAAFGPYGEGYVRLSYAA---SMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred -----------CCCHHHHHHHHHHhCC-EEEeCchhhCCCCCCEEEEEecC---CHHHHHHHHHHHHHHHHhh
Confidence 000135565554 445 4444432 2 235799999662 5789999999998887664
No 159
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.56 E-value=1.8e-13 Score=126.46 Aligned_cols=147 Identities=16% Similarity=0.182 Sum_probs=105.0
Q ss_pred cCHHHHHHHHHH-HHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCC
Q 046506 26 LSPDSLMAKINS-DVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGAD 104 (310)
Q Consensus 26 id~~~Le~~i~~-~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D 104 (310)
+|+++++++|++ . +.+|++.+.+|++|.+.|+++|+++||++|+++++|++|+.+....+ .. .++|
T Consensus 124 ~d~~~l~~~i~~~~------tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~----l~---~GaD 190 (385)
T PRK08574 124 PSTEDIIEAIKEGR------TKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYRP----LR---HGAD 190 (385)
T ss_pred CCHHHHHHhcCccC------ceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCCh----hh---hCCc
Confidence 357899999876 3 44788899999999999999999999999999999999976643221 11 2589
Q ss_pred eeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 105 SFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 105 ~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
+++.|+||++++|.+ .|++++++++...+..... .+. |.....+.+|.+++ +...
T Consensus 191 ivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~-~~~--------------------g~~~~p~~a~l~l~--~l~t 247 (385)
T PRK08574 191 FVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWR-RRL--------------------GTIMQPFEAYLVLR--GLKT 247 (385)
T ss_pred EEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHH-Hhc--------------------CCCCCHHHHHHHHc--ccCc
Confidence 999999999998865 3546666655433321111 000 11112233344433 5567
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCeE
Q 046506 183 LRHFLRSHVNMAKLFERLVGSDKRFE 208 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~~~~~ 208 (310)
+..++++..++++++.+.|++.|.+.
T Consensus 248 L~~R~~~~~~na~~la~~L~~~p~v~ 273 (385)
T PRK08574 248 LEVRFERQCRNAMAIAEFLSEHPKVA 273 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcC
Confidence 88899999999999999999998885
No 160
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.56 E-value=3.3e-13 Score=124.71 Aligned_cols=248 Identities=14% Similarity=0.094 Sum_probs=156.4
Q ss_pred eecCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 4 QIVGIDVKNFRAIKTTKS-SSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~-~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
.++|.. ++.+|+++. .++.+|+++|+++|++++ .+++++.++|+||.+.+ +++|+++|++||++++.
T Consensus 131 ~~~gg~---~v~v~l~~~~~~f~~d~~~l~~~i~~kt------k~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~ 201 (393)
T COG0436 131 KLAGGK---PVPVPLDEEENGFKPDLEDLEAAITPKT------KAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIIS 201 (393)
T ss_pred HhcCCE---EEEEeCCcCccCCcCCHHHHHhhcCccc------eEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEE
Confidence 345555 899998653 268999999999999864 48999999999999866 88899999999999999
Q ss_pred ecccccccccChhhhhhhcCCCC---CCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCC
Q 046506 80 DAAYAGSACICPEFRHFIDGVEG---ADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDY 155 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~~---~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 155 (310)
|.++....+....+... ..+.. .-+..-|..|.++.+ --+|+++..++..+ +.+..-..+...
T Consensus 202 DEiY~~l~yd~~~~~s~-~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~-~~~~~~~~~~~~----------- 268 (393)
T COG0436 202 DEIYEELVYDGAEHPSI-LELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEELI-AALRKLKSYLTS----------- 268 (393)
T ss_pred ehhhhhcccCCCCcCCH-hhcCCCcceEEEEecccccccccccceeEeecChHHHH-HHHHHHHHhccc-----------
Confidence 99986655443211111 11111 123446899998865 44666665545433 222111111111
Q ss_pred CCceeccCCCcchHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhh
Q 046506 156 KDWQITLSRRFRSLKLWFVLRNYG-VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~ 234 (310)
+...+...++.++++.-. .+..+.+.+...++.+.+.+.|.+++|+.+..+|......|.-.+...
T Consensus 269 ------~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~~------- 335 (393)
T COG0436 269 ------CAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPELL------- 335 (393)
T ss_pred ------CCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCCC-------
Confidence 111111222223332111 235667777888999999999999988998875655444443333100
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE-C---CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESINASGKAYMTHAVL-G---GIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~---~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+ ..++...|.++.++.+.|... + +.+.+|+|+. +++++++..++.+++....
T Consensus 336 -------d-------~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~---~~~~~l~~a~~rl~~~~~~ 391 (393)
T COG0436 336 -------D-------SEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLA---TSEETLEEALRRLARFLAE 391 (393)
T ss_pred -------C-------HHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEe---cCHHHHHHHHHHHHHHHHh
Confidence 0 135666666665555555432 2 5689999965 3458888888888877654
No 161
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.56 E-value=3.2e-13 Score=119.78 Aligned_cols=236 Identities=12% Similarity=0.083 Sum_probs=152.9
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChh
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPE 92 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~ 92 (310)
++..++|++ ++.||.|++++.+.+.+ |.++++ +.|..-...|++++.++|++.|++|.+|.||-+|.+..-.
T Consensus 141 ~v~Y~vd~e-t~~IDyD~~~k~a~e~k-----PK~ii~--G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~ 212 (413)
T COG0112 141 VVSYGVDPE-TGLIDYDEVEKLAKEVK-----PKLIIA--GGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGV 212 (413)
T ss_pred eEecccccc-cCccCHHHHHHHHHHhC-----CCEEEE--CccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhccc
Confidence 566777764 56999999999998864 665554 3333445678999999999999999999999877665544
Q ss_pred hhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhh-ccCCccccccccccccccCCCCceeccCCCcc-hHH
Q 046506 93 FRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSL-STNPEYLKNKATESKQVVDYKDWQITLSRRFR-SLK 170 (310)
Q Consensus 93 ~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~-~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 170 (310)
+. .-+.++|+++.+.||+|.+|.| |+++.++.+..++.- ...| ..|++-... .++
T Consensus 213 ~p---~P~~~AdvVTtTTHKTlrGPrG-G~Il~~~eel~kkin~aVFP-------------------g~qggpl~HviAa 269 (413)
T COG0112 213 HP---NPLPHADVVTTTTHKTLRGPRG-GIILTNDEELAKKINSAVFP-------------------GLQGGPLMHVIAA 269 (413)
T ss_pred CC---CCCCccceEeCCcccCCCCCCc-eEEEeccHHHHHHhhhhcCC-------------------ccCCChHHHHHHH
Confidence 43 2244699999999999999975 455555544432221 1111 123332222 234
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC-CCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHH
Q 046506 171 LWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP-RHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEF 249 (310)
Q Consensus 171 ~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (310)
..-+++.....++++..++..+||+.|.+.|.+. |+++++. .+..++.+.+.+.... .
T Consensus 270 kaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdnHl~lVDl~~~~~~------------------G-- 328 (413)
T COG0112 270 KAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDNHLVLVDLRSKGLT------------------G-- 328 (413)
T ss_pred HHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccceEEEEEcccCCCC------------------H--
Confidence 4455666667889999999999999999999985 9999863 4567777777742211 1
Q ss_pred HHHHHHHHHhcCcEEEE----EeE---ECCEeEEEEEcc---CCCCCHHHHHHHHHHHHHHHH
Q 046506 250 NRELLESINASGKAYMT----HAV---LGGIYAIRFAAG---ATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 250 ~~~l~~~l~~~g~~~~~----~~~---~~~~~~iRis~~---~~~~t~edi~~li~~l~~~~~ 302 (310)
.+....|.+.| +.+. |.+ .-....||+-.. .....++|++.+-+-|.+++.
T Consensus 329 -k~ae~~L~~~~-It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~ 389 (413)
T COG0112 329 -KKAEAALERAG-ITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLD 389 (413)
T ss_pred -HHHHHHHHHcC-EeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHh
Confidence 12222333333 3332 111 123567888632 233556777777776666654
No 162
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.56 E-value=3.1e-13 Score=124.30 Aligned_cols=235 Identities=13% Similarity=0.056 Sum_probs=148.1
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh--CcEEEeec
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF--GIWVHVDA 81 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~--g~~l~vD~ 81 (310)
...|+. ++.+|.+ ++.+|++++++++++. +.+|++++++|++|.+.|.++|.++|+.+ |+++++|+
T Consensus 126 ~~~g~~---~~~~~~~---~~~~~~~~l~~~~~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De 193 (367)
T PRK02731 126 QAVGAK---PVEVPAK---DYGHDLDAMLAAVTPR------TRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDE 193 (367)
T ss_pred HHcCCe---EEEeccc---CCCCCHHHHHHHhCCC------CcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEEC
Confidence 345665 8888885 3579999999998643 44788889999999999999999999875 99999999
Q ss_pred ccccccccChhhhhh-hcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCce
Q 046506 82 AYAGSACICPEFRHF-IDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 82 a~~~~~~~~~~~~~~-~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 159 (310)
++............. ......-.++..|..|.++.| ..+|+++.+ +..++........+
T Consensus 194 ~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~-~~~~~~l~~~~~~~------------------ 254 (367)
T PRK02731 194 AYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAP-PEIIDALNRVRQPF------------------ 254 (367)
T ss_pred cHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCC-HHHHHHHHHccCCC------------------
Confidence 986543211111000 000111234556888987644 356888764 43433221111000
Q ss_pred eccCCCcchHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccc
Q 046506 160 ITLSRRFRSLKLWFVLRNYGV-ANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENS 238 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 238 (310)
. ......+++...+.. ..+++..++..++.+.+.+.|++. ++.+. ++..+++++.+.+..
T Consensus 255 -~----~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~i~~~~~~------------ 315 (367)
T PRK02731 255 -N----VNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAEL-GLEYI-PSVGNFILVDFDDGK------------ 315 (367)
T ss_pred -C----CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCceEEEEECCCCC------------
Confidence 0 012333444444433 346777778888888999999887 77765 556777777763210
Q ss_pred cchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 239 LLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
-..++.+.|.+.|............+++|+|+. +.+++++++++|++++.
T Consensus 316 ----------~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~----~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 316 ----------DAAEAYQALLKRGVIVRPVAGYGLPNALRITIG----TEEENRRFLAALKEFLA 365 (367)
T ss_pred ----------CHHHHHHHHHHCCEEEEeCCCCCCCCeEEEecC----CHHHHHHHHHHHHHHHh
Confidence 014566777777654333222222468999943 57899999999998753
No 163
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.56 E-value=2.5e-12 Score=122.48 Aligned_cols=268 Identities=15% Similarity=0.146 Sum_probs=148.8
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++.+|.. ++.+|+++++.+.+|+++|++++.+..+.+..+.++++..++|++|.+.+ +++|+++|++||+++++
T Consensus 180 ~~~~g~~---~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~ 256 (481)
T PTZ00377 180 ITLLGGK---QVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMA 256 (481)
T ss_pred HHHcCCE---EEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEE
Confidence 3456666 89999987555789999999999764333223556777788999999988 88899999999999999
Q ss_pred ecccccccccC----hhhhhhhcCCCC-----CC-eeeeeccccccc--ccceEEEEEe--CchhHHhhhccCCcccccc
Q 046506 80 DAAYAGSACIC----PEFRHFIDGVEG-----AD-SFSLNAHKWFFT--TLDCCCLWVK--DPSDLVNSLSTNPEYLKNK 145 (310)
Q Consensus 80 D~a~~~~~~~~----~~~~~~~~~~~~-----~D-~~~~~~hK~l~~--p~g~g~l~v~--~~~~~~~~~~~~~~y~~~~ 145 (310)
|.++.-..+.. ........++.. .. ++..|..|.+++ ..-+|++.+. +++.+.........+..
T Consensus 257 De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~~~~~-- 334 (481)
T PTZ00377 257 DEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLASINLC-- 334 (481)
T ss_pred ehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhheecC--
Confidence 99986433211 111111111100 11 344688997542 3456777652 45443322111101100
Q ss_pred ccccccccCCCCceeccCCCcchHHHHHHHHH--hCH---H----HHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCce
Q 046506 146 ATESKQVVDYKDWQITLSRRFRSLKLWFVLRN--YGV---A----NLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFA 216 (310)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~---~----~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~ 216 (310)
.-.+....+..+++. .+. + ...+..++..+..+.+.+.|.+++++.+. +|+.+
T Consensus 335 -----------------~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~-~p~gg 396 (481)
T PTZ00377 335 -----------------SNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQ-PVEGA 396 (481)
T ss_pred -----------------CChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEee-cCCee
Confidence 000111222222211 011 1 12223334567778889999888888876 44444
Q ss_pred EEEE-EEc-CCcchhhhhhhhccccchhHHHHHHHHHHH-HHHHHhcCcEEEEEeEEC---CEeEEEEEccCCCCCHHHH
Q 046506 217 VVCF-RVS-PSAVMDKLKTKYENSLLSEEERINEFNREL-LESINASGKAYMTHAVLG---GIYAIRFAAGATLTEERHV 290 (310)
Q Consensus 217 ~v~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~l~~~g~~~~~~~~~~---~~~~iRis~~~~~~t~edi 290 (310)
...| .+. +..... ...... . .. ...+ ...+.+.|.....+..+. +.+.+|+|+. ++++++
T Consensus 397 ~fl~~~~~l~~~~~~---~~~~~~--~-----~~-~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~---~~~e~l 462 (481)
T PTZ00377 397 MYAFPRIELPEKAIQ---EAKERG--L-----AP-DVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL---PPEEQI 462 (481)
T ss_pred EEEEeeccCchhhHH---HHHhcC--C-----Cc-HHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC---CCHHHH
Confidence 3333 333 111000 000000 0 00 1122 334445665554444333 3468999965 568899
Q ss_pred HHHHHHHHHHHHHHhhc
Q 046506 291 MVAWTVVQEHLEALLSA 307 (310)
Q Consensus 291 ~~li~~l~~~~~~~~~~ 307 (310)
+..++.|++++++..++
T Consensus 463 ~~~l~rl~~~~~~~~~~ 479 (481)
T PTZ00377 463 EEMVKKIKEFHESFMKK 479 (481)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999998776553
No 164
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.56 E-value=8.6e-13 Score=122.63 Aligned_cols=245 Identities=13% Similarity=0.105 Sum_probs=145.9
Q ss_pred eecCCCCCCEEEEecCCCCCcc-cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYG-LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~-id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
+..|+. ++.++.++++.+. .++++|++++++. +.++++++++|.+|.+.+ +++|+++|+++|+++++
T Consensus 130 ~~~g~~---~~~v~~~~~~g~~~~~~~~l~~~~~~~------~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~ 200 (397)
T PRK07568 130 TSAGVK---IVPVTTKIEEGFHLPSKEEIEKLITPK------TKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLIS 200 (397)
T ss_pred HHcCCE---EEEeecCcccCCCCCCHHHHHHhcCcc------ceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEE
Confidence 456776 8899987432233 3679999988654 347788889999999875 78899999999999999
Q ss_pred ecccccccccChhhhhhhcCCCC-CC--eeeeeccccccc-ccceEEEEEeCchhHHhhhccCCccccccccccccccCC
Q 046506 80 DAAYAGSACICPEFRHFIDGVEG-AD--SFSLNAHKWFFT-TLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDY 155 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~~-~D--~~~~~~hK~l~~-p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 155 (310)
|.+++............ ..+.. .+ ++..|.+|.++. ...+|+++..++..+.............
T Consensus 201 De~y~~~~~~~~~~~s~-~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~----------- 268 (397)
T PRK07568 201 DEVYREFVYDGLKYTSA-LSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQARLSP----------- 268 (397)
T ss_pred eccchhcccCCCCccCh-hhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHhhccCCC-----------
Confidence 99987543322111111 11111 12 566799999875 3457777665554443221110000000
Q ss_pred CCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceE-EEEEEcCCcchhhhhhh
Q 046506 156 KDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAV-VCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~-v~~~~~~~~~~~~~~~~ 234 (310)
+ .+....+..+++ .+...+++..++..+..+.+.+.|++++++.+. .|..+. +.+.++..+
T Consensus 269 -------s-~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~p~g~~~~~~~l~~~~-------- 330 (397)
T PRK07568 269 -------P-TLEQIGAAALLD-TPESYFDEVREEYKKRRDILYEELNKIPGVVCE-KPKGAFYIIAKLPVDD-------- 330 (397)
T ss_pred -------C-cHHHHHHHHHhh-CCHHHHHHHHHHHHHHHHHHHHHHhcCCCceec-CCCcceEEEEecCCCC--------
Confidence 0 011122222222 134556777778888889999999888777655 344443 444443311
Q ss_pred hccccchhHHHHHHHHHHHHHHHHh------cCcEEEEEeEE---C--CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESINA------SGKAYMTHAVL---G--GIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~------~g~~~~~~~~~---~--~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
..++.+.+.+ .|....++... . +.+.+|+|+. .++++++..++.|.+.+++
T Consensus 331 ---------------~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~---~~~~~~~~~~~~l~~~l~~ 392 (397)
T PRK07568 331 ---------------AEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV---LNEEDLKRAMEILKEALEK 392 (397)
T ss_pred ---------------HHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe---CCHHHHHHHHHHHHHHHHH
Confidence 0234444433 34433333222 1 2468999965 3479999999999988876
Q ss_pred Hh
Q 046506 304 LL 305 (310)
Q Consensus 304 ~~ 305 (310)
..
T Consensus 393 ~~ 394 (397)
T PRK07568 393 YN 394 (397)
T ss_pred hh
Confidence 54
No 165
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.55 E-value=1.1e-12 Score=121.94 Aligned_cols=219 Identities=14% Similarity=0.102 Sum_probs=137.2
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++|++.+.+. +.+|++....+++|.+.| +++|.++|++||+++++|++|++.........-...++ .
T Consensus 172 d~~~l~~~~~~~------~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~-~ 244 (398)
T PRK03244 172 DVDALAAAVDDD------TAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGV-T 244 (398)
T ss_pred CHHHHHHhhcCC------eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCC-C
Confidence 789999888432 457777777899999887 89999999999999999999975433222110001222 3
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
.|++++ .|++++....|+++.+++ .. +.+.. .... .++ ++-+....++.++++.+..
T Consensus 245 pDi~t~--sK~l~~G~~ig~~~~~~~-~~-~~~~~--~~~~--------------~t~-~~~~~~~aaa~a~l~~~~~-- 301 (398)
T PRK03244 245 PDVVTL--AKGLGGGLPIGACLAFGP-AA-DLLTP--GLHG--------------STF-GGNPVACAAALAVLDTIAS-- 301 (398)
T ss_pred CCEEEE--chhhhCCcccEEEEEcHH-HH-hhccC--CCCc--------------CCC-CCCHHHHHHHHHHHHHHHh--
Confidence 676655 699987666888877654 32 33211 0000 011 1111223334444443432
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCeEEec--CCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhc
Q 046506 183 LRHFLRSHVNMAKLFERLVGSDKRFEVVF--PRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINAS 260 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~~~~~v~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 260 (310)
++..++..++.+++++.|+++ +..++. .....++.+.+... ....+.+.+.++
T Consensus 302 -~~~~~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g~~~~i~~~~~-----------------------~~~~~~~~l~~~ 356 (398)
T PRK03244 302 -EGLLENAERLGEQLRAGIEAL-GHPLVDHVRGRGLLLGIVLTAP-----------------------VAKAVEAAAREA 356 (398)
T ss_pred -ccHHHHHHHHHHHHHHHHHhc-CCCceeeEeeccEEEEEEEecc-----------------------HHHHHHHHHHHC
Confidence 345677778889999999875 232221 12345565655321 124677788888
Q ss_pred CcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 261 GKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 261 g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
|.+ +.+. +..+||++++ ...+++||++++++|++++..++
T Consensus 357 Gv~-~~~~---~~~~iR~~p~-~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 357 GFL-VNAV---APDVIRLAPP-LIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred CeE-Eeec---CCCEEEEECC-CcCCHHHHHHHHHHHHHHHHhcc
Confidence 754 4432 3468999965 56889999999999999987653
No 166
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.55 E-value=5.3e-13 Score=124.27 Aligned_cols=257 Identities=14% Similarity=0.063 Sum_probs=147.6
Q ss_pred EEEEecCCCC--------CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcc-cccCC---hHHHHHHHHHhCcEEEee
Q 046506 13 FRAIKTTKSS--------SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAI-TAVDT---LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 13 v~~v~~~~~~--------~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~-G~~~p---l~~I~~l~~~~g~~l~vD 80 (310)
.+.+++++.. ++.+|+++|+++|.+.+.. .+.+|+++..+|.+ |.+.+ +++|+++|++||++++.|
T Consensus 115 pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~--~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~D 192 (431)
T cd00617 115 PVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAE--NIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLD 192 (431)
T ss_pred eEEEecccccccccccCCCCCcCHHHHHHHhCcccCC--CccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 8888887531 2459999999999864211 13467777777765 77654 668899999999999999
Q ss_pred cccccccccC-----hhh-----hhhh-cCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCcccccccccc
Q 046506 81 AAYAGSACIC-----PEF-----RHFI-DGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATES 149 (310)
Q Consensus 81 ~a~~~~~~~~-----~~~-----~~~~-~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~ 149 (310)
+||......+ +.+ .+.. .-...+|++++|+||.+++|. .|+++.++++.+.+..... +.....
T Consensus 193 aAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~-GG~i~~~d~~l~~~~~~~~--~~~~~~--- 266 (431)
T cd00617 193 AARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNI-GGFLALRDDELYEEARQRV--VLYEGF--- 266 (431)
T ss_pred chhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCcc-ceEEEeCcHHHHHHHHHhc--cccCCc---
Confidence 9986542111 111 1110 112369999999999988875 3455555554544432111 000000
Q ss_pred ccccCCCCceeccCCCcchHH-HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcch
Q 046506 150 KQVVDYKDWQITLSRRFRSLK-LWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVM 228 (310)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~ 228 (310)
..-++.....+. +..++..... .+.+++..+.++++.+.|.+. |+.+..|.....+.+.+....
T Consensus 267 ---------~~~gG~~~r~~~A~A~gL~e~~~---~~~l~~~~~~r~~l~~~L~~~-G~~v~~P~Ggh~v~~d~~~~~-- 331 (431)
T cd00617 267 ---------VTYGGMAGRDMEALAQGLREAVE---EDYLRHRVEQVRYLGDRLDEA-GVPIVEPAGGHAVFIDAREFL-- 331 (431)
T ss_pred ---------cccccccHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHC-CCCccCCCcceEEEEEhHHhc--
Confidence 001121212221 1213321111 234455555668899999887 888876666666666555310
Q ss_pred hhhhhhhccccchhHHHHHHHHHHHHHHHHhcC-cEEEE-Ee-----EEC-------CEeEEEEEccCCCCCHHHHHHHH
Q 046506 229 DKLKTKYENSLLSEEERINEFNRELLESINASG-KAYMT-HA-----VLG-------GIYAIRFAAGATLTEERHVMVAW 294 (310)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~-~~-----~~~-------~~~~iRis~~~~~~t~edi~~li 294 (310)
.. .+.+. --.+++..+|.++. ...+. +. ... ....+|+.+...--|.+++|.+.
T Consensus 332 ---~~-------~~~~~--~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~ 399 (431)
T cd00617 332 ---PH-------IPQEQ--FPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVA 399 (431)
T ss_pred ---CC-------CCccc--CcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHH
Confidence 00 00000 01245555555444 33222 11 111 14789999887678899999999
Q ss_pred HHHHHHHHHH
Q 046506 295 TVVQEHLEAL 304 (310)
Q Consensus 295 ~~l~~~~~~~ 304 (310)
++|.++.++.
T Consensus 400 ~~~~~~~~~~ 409 (431)
T cd00617 400 AAVIALYERR 409 (431)
T ss_pred HHHHHHHhhH
Confidence 9999998653
No 167
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.55 E-value=8e-13 Score=121.05 Aligned_cols=235 Identities=9% Similarity=0.054 Sum_probs=147.0
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|.. ++.+|.++++.+.+| +++++.+.+. +.+++++.++|++|...+ +++|+++|++||+++++
T Consensus 110 ~~~~g~~---~~~~~~~~~~~~~~d-~~~~~~~~~~------~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~ 179 (354)
T PRK06358 110 LKAFDAE---IEYAELTEETNFAAN-EIVLEEIKEE------IDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLII 179 (354)
T ss_pred HHHcCCe---eEEEeCccccCCCcc-HHHHHhhccC------CCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEE
Confidence 4456776 899998765456788 6666666432 346777888999999876 77888899999999999
Q ss_pred ecccccccccChhhhhhhcCCCCCC--eeeeecccccc-cccceEEEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 80 DAAYAGSACICPEFRHFIDGVEGAD--SFSLNAHKWFF-TTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~~~D--~~~~~~hK~l~-~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
|.++.-...... .......+...+ ++..|..|.++ ...-+|+++..++..........+.+ .
T Consensus 180 De~Y~~~~~~~~-~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~~~----~---------- 244 (354)
T PRK06358 180 DEAFMDFLEENE-TISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMREPW----S---------- 244 (354)
T ss_pred eCcccccCCCcc-chhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCCC----c----------
Confidence 999864432211 111111111111 56689999998 44667777655443332221111111 0
Q ss_pred CceeccCCCcchHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhh
Q 046506 157 DWQITLSRRFRSLKLWFVLRNYGV-ANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
...+..+++...+.. +.+++..+...+..+.+.+.|.+++++.+. ++..+.+.+.+++.
T Consensus 245 ---------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~g~f~~~~~~~~---------- 304 (354)
T PRK06358 245 ---------INTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVY-KPSVNFIFFKLEKP---------- 304 (354)
T ss_pred ---------chHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc-CCcceEEEEEcCch----------
Confidence 112222333333433 234677777788889999999988887765 45666555544321
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
.++.+.+.+.|.....+..+. +.+++|+++. ++++.++|+++|+++.
T Consensus 305 ---------------~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls~~----~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 305 ---------------IDLRKELLKKGILIRSCSNYRGLDENYYRVAVK----SREDNKKLLKALEVIL 353 (354)
T ss_pred ---------------HHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHHh
Confidence 356777777775444443332 3468999943 5789999999998764
No 168
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.55 E-value=4e-13 Score=124.30 Aligned_cols=240 Identities=14% Similarity=0.093 Sum_probs=142.4
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++.+|.. ++.+|.++.+.+.+|++++++++.+. +.++++++++|++|.+.+ +++|+++|++||+++++
T Consensus 132 ~~~~G~~---v~~v~~~~~~g~~~d~~~l~~~~~~~------~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~ 202 (383)
T TIGR03540 132 TLFAGGE---PYEMPLKEENGFLPDFDAIPEDIAKK------AKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCH 202 (383)
T ss_pred HHhcCCE---EEEEecCcccCCccCHHHHHhhcccc------ceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEE
Confidence 4466776 99999975434678999999998654 447777788999999988 78899999999999999
Q ss_pred ecccccccccChhhhhhh--cCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCC
Q 046506 80 DAAYAGSACICPEFRHFI--DGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDY 155 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~--~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 155 (310)
|.+++-............ .......++..|..|.++.| | +|+++ .+++.+........ +....
T Consensus 203 De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~-GlRiG~~i-~~~~l~~~~~~~~~-~~~~~---------- 269 (383)
T TIGR03540 203 DNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMT-GWRIGMAV-GNADLIAGLGKVKT-NVDSG---------- 269 (383)
T ss_pred ecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCc-cceeeEEe-CCHHHHHHHHHHHH-hcccC----------
Confidence 999964332111111100 11111335668889988644 4 77775 45544432211110 00000
Q ss_pred CCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhh
Q 046506 156 KDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
........+..+++ -+.+.+++..++..++.+.+.+.|.+. ++.+..+.....+.+.+++. .
T Consensus 270 -------~~~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~l~~~-~-------- 331 (383)
T TIGR03540 270 -------VFQAIQYAAIAALN-GPQDVVKEIRKIYQRRRDLLLEALKKI-GIDVEKPKATFYVWVPVPEG-Y-------- 331 (383)
T ss_pred -------CChHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEecCCCcceEEEEECCCC-C--------
Confidence 00011122222332 134556777778888899999999887 78776443333344554431 0
Q ss_pred ccccchhHHHHHHHHHHHHHHHHh-cCcEEEEEe-EEC--CEeEEEEEccCCCCCHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINA-SGKAYMTHA-VLG--GIYAIRFAAGATLTEERHVMVAWTVVQE 299 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~-~~~--~~~~iRis~~~~~~t~edi~~li~~l~~ 299 (310)
+ ..++.+.+.+ .|. .+.+. ... +.+++|+++. .++++++..++.|++
T Consensus 332 ------~-------~~~~~~~ll~~~gi-~v~~g~~f~~~~~~~~Ris~~---~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 332 ------T-------SAEFAARLLEETGV-VVTPGVGFGEYGEGYIRISLT---VPDERLEEAVARIKK 382 (383)
T ss_pred ------C-------HHHHHHHHHHHCCE-EEecchhhCccCCCeEEEEec---CCHHHHHHHHHHHhh
Confidence 0 1356666654 454 44433 222 3468999965 346677776666543
No 169
>PRK06460 hypothetical protein; Provisional
Probab=99.55 E-value=3.3e-13 Score=124.37 Aligned_cols=149 Identities=17% Similarity=0.141 Sum_probs=102.0
Q ss_pred cEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeeeeecccccccccc--eEE
Q 046506 45 PLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD--CCC 122 (310)
Q Consensus 45 ~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~ 122 (310)
+.+|++.+++|++|.+.|+++|+++|+++|++++||++++.+.. .. .. . .++|+++.|+||+++++.+ .|+
T Consensus 131 tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~-~~---~l--~-~~~divv~S~sK~l~G~~~~~~G~ 203 (376)
T PRK06460 131 YDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPIN-QK---PL--E-LGADIVVHSASKFLAGHNDVIAGL 203 (376)
T ss_pred ceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCcccc-CC---hh--h-cCCCEEEeecceeccCCCCceEEE
Confidence 45888999999999999999999999999999999999975421 11 11 1 2489999999999976543 454
Q ss_pred EEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHc
Q 046506 123 LWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVG 202 (310)
Q Consensus 123 l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~ 202 (310)
+ +.+++...........+ . ....+..+|.+++ +.+.++.++++..++++++.+.|+
T Consensus 204 ~-~~~~~l~~~l~~~~~~~-g--------------------~~~~~~~a~~~l~--~~~~l~~r~~~~~~n~~~l~~~L~ 259 (376)
T PRK06460 204 A-AGYGKLLNVIDQMRRTL-G--------------------TSLDPHAAYLTLR--GIKTLKIRMDVINRNAEQIAEFLE 259 (376)
T ss_pred E-ecCHHHHHHHHHHHHhc-C--------------------CCCCHHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHH
Confidence 4 45554433221111111 0 0012233444443 567889999999999999999999
Q ss_pred CCCCeEEec-C-----C-----------CceEEEEEEcC
Q 046506 203 SDKRFEVVF-P-----R-----------HFAVVCFRVSP 224 (310)
Q Consensus 203 ~~~~~~v~~-~-----~-----------~~~~v~~~~~~ 224 (310)
+.|.+.-+. | | ..++++|.+.+
T Consensus 260 ~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~ 298 (376)
T PRK06460 260 GHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNG 298 (376)
T ss_pred cCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence 888875332 2 1 25688888864
No 170
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.55 E-value=8.5e-13 Score=122.90 Aligned_cols=257 Identities=12% Similarity=0.018 Sum_probs=150.2
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|+. ++.+++++++++.+|++.|++.+++. +.++++.+++|++|.+.+ +++|+++|+++|+++++
T Consensus 136 ~~~~g~~---v~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~ 206 (401)
T TIGR01264 136 AESMGIE---VKLYNLLPDKSWEIDLKQLESLIDEK------TAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIA 206 (401)
T ss_pred HHHcCCE---EEEeecCCccCCCCCHHHHHHHhccC------ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 4556776 88888876545789999999988654 236778888999999865 88899999999999999
Q ss_pred ecccccccccChhhhhhhcCCCCC-Ceeeeecccccccc-cceEEEEEeCch-hHHhhhccCCccccccccccccccCCC
Q 046506 80 DAAYAGSACICPEFRHFIDGVEGA-DSFSLNAHKWFFTT-LDCCCLWVKDPS-DLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~~~-D~~~~~~hK~l~~p-~g~g~l~v~~~~-~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
|.++...............-.... -+++.|..|.++.| .-+|+++..++. .+.........+.....
T Consensus 207 De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~~~~---------- 276 (401)
T TIGR01264 207 DEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVKLSQRIL---------- 276 (401)
T ss_pred EhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHHHHHHhhccC----------
Confidence 999865443221111111100111 25678999975554 457877765421 11111100000000000
Q ss_pred CceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhc
Q 046506 157 DWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~ 236 (310)
..+ ......+...+.....+.+++..++..+..+.+.+.|++++++.+..+..++.+.+.+......
T Consensus 277 ----~~~-~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~-------- 343 (401)
T TIGR01264 277 ----GPC-TIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMYMMVGIEMEHFP-------- 343 (401)
T ss_pred ----CCC-cHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeEEEEEecccccC--------
Confidence 000 0111222223322123556777788888888999999988777654444555666655321000
Q ss_pred cccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 237 NSLLSEEERINEFNRELLESIN-ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
.. ....++.+.+. +.|.....+......+++|+++.. .+++++..++.|.+.+++
T Consensus 344 ----~~-----~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~---~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 344 ----EF-----KNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTV---PVVMMEEACSRIQEFCER 399 (401)
T ss_pred ----CC-----CCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcC---CHHHHHHHHHHHHHHHhc
Confidence 00 00134556665 456544433333446799999663 478999999888887654
No 171
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.55 E-value=2.9e-13 Score=123.74 Aligned_cols=238 Identities=12% Similarity=0.026 Sum_probs=143.0
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEE
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVH 78 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~ 78 (310)
++...|+. ++.+|.++.+.+.+|++++++++.+. +.+++++..+|++|.+.| +++|+++|++||++++
T Consensus 103 ~~~~~g~~---~~~v~~~~~~~~~~d~~~l~~~~~~~------~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii 173 (350)
T TIGR03537 103 GALFAGGE---PTAVKLKKEDGFLLRLEKVEKSILEE------TKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILC 173 (350)
T ss_pred HHHhcCCE---EEEcccCcccCCccCHHHHHHhhhhc------cEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEE
Confidence 34567776 99999975334679999999998764 347778888999999888 8899999999999999
Q ss_pred eecccccccccChhhhhhhcCCC-CCCeeeeeccccccccc-ceEEEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 79 VDAAYAGSACICPEFRHFIDGVE-GADSFSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 79 vD~a~~~~~~~~~~~~~~~~~~~-~~D~~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
+|.+++......+. .. ..... .-.++..|.+|.++.|. -.|+++ .++............+ ..
T Consensus 174 ~De~y~~~~~~~~~-~~-~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~-~~~~~~~~~~~~~~~~-~~------------ 237 (350)
T TIGR03537 174 SDECYTEIYFGEPP-HS-ALEVGIENVLAFHSLSKRSGMTGYRSGFVA-GDEKLISFLRKLRANF-GV------------ 237 (350)
T ss_pred EeccccccccCCCC-Cc-hhhcCcCCEEEEeecccccCCccccceeee-cCHHHHHHHHHHHHhh-cc------------
Confidence 99998643321111 00 01111 11255568999987552 256554 4454332222111111 00
Q ss_pred CceeccCCCcchHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceE-EEEEEcCCcchhhhhhh
Q 046506 157 DWQITLSRRFRSLKLWFVLRNY-GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAV-VCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~-v~~~~~~~~~~~~~~~~ 234 (310)
+. ..+...++...+ .....++..++..++.+.+.+.|.+. ++++. ++..+. +.+.++.. .
T Consensus 238 ------~~--~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~-g~~~~-~~~g~~~~~~~~~~~-~------- 299 (350)
T TIGR03537 238 ------AS--PDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKV-GLEYL-YPDATFYLWVKVPSG-I------- 299 (350)
T ss_pred ------CC--CHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CCCeEEEEEEECCCC-C-------
Confidence 00 001111111122 23455677777888888888988876 77665 444443 44444331 0
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE--CCEeEEEEEccCCCCCHHHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESINASGKAYMTHAVL--GGIYAIRFAAGATLTEERHVMVAWTVVQE 299 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~~~~~iRis~~~~~~t~edi~~li~~l~~ 299 (310)
-..++.+.|.++|.....+... .+.+++|+++. .++++++..++.|++
T Consensus 300 --------------~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~~---~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 300 --------------DAKDYALRLLENGIVVAPGENFGSGEEGYVRVALV---PTLEECEEALRLWER 349 (350)
T ss_pred --------------CHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEec---CCHHHHHHHHHHHhc
Confidence 0135677777776543333322 22578999954 467888888887764
No 172
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.55 E-value=1.1e-12 Score=122.46 Aligned_cols=254 Identities=12% Similarity=0.066 Sum_probs=150.6
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|+. ++.+|.+++..+.+|+++|++++.+. +.++++++++|++|.+.+ +++|+++|++||+++++
T Consensus 145 ~~~~g~~---~~~i~~~~~~~~~~d~~~l~~~~~~~------~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~ 215 (412)
T PTZ00433 145 CKAYGIE---MRFYNCRPEKDWEADLDEIRRLVDDR------TKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLIS 215 (412)
T ss_pred HHHcCCE---EEEEecCccccCcCCHHHHHHHhccC------ceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEE
Confidence 4566776 89999876545789999999988654 347778889999998765 77789999999999999
Q ss_pred ecccccccccChhhhhhhcCCC-C-CCeeeeecccccccc-cceEEEEEeCc-----hhHHhhhccCCcccccccccccc
Q 046506 80 DAAYAGSACICPEFRHFIDGVE-G-ADSFSLNAHKWFFTT-LDCCCLWVKDP-----SDLVNSLSTNPEYLKNKATESKQ 151 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~-~-~D~~~~~~hK~l~~p-~g~g~l~v~~~-----~~~~~~~~~~~~y~~~~~~~~~~ 151 (310)
|.++.........+.. ...+. . --++..|..|.++.| .-+|++++.++ ..+........... ..
T Consensus 216 De~y~~~~~~~~~~~~-~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~~~-~~------ 287 (412)
T PTZ00433 216 DEIYAGMVFNGATFTS-VADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGMLVC-GP------ 287 (412)
T ss_pred eccccccccCCCCccc-hhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhhccC-CC------
Confidence 9998644322111111 11110 1 125668999998544 66788876332 22211111000000 00
Q ss_pred ccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhh
Q 046506 152 VVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKL 231 (310)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~ 231 (310)
+ ......+...+..-....+++..++..+..+.+.+.|.+..++.+..+.....+.+.+......
T Consensus 288 -----------~-~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f~~~~l~~~~~~--- 352 (412)
T PTZ00433 288 -----------C-SVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMFLMSRLDLEKFR--- 352 (412)
T ss_pred -----------C-hHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEEEEEEechhhcC---
Confidence 0 0111111222221113456777778888888899999876677655333455555555431000
Q ss_pred hhhhccccchhHHHHHHHHHHHHHHHHh-cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 232 KTKYENSLLSEEERINEFNRELLESINA-SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
+ .....++.+.+.+ .|.....+......+++|+++.. .+++++..++.|.+++...+
T Consensus 353 ----------~----~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~---~~e~l~~al~~l~~~~~~~~ 410 (412)
T PTZ00433 353 ----------D----IKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR---PVEVLREAVERIKAFCERHK 410 (412)
T ss_pred ----------C----CCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecC---CHHHHHHHHHHHHHHHHHhc
Confidence 0 0001356666664 56544443333445799999652 48889999999988876543
No 173
>PRK07550 hypothetical protein; Provisional
Probab=99.54 E-value=5.9e-13 Score=123.34 Aligned_cols=245 Identities=13% Similarity=0.093 Sum_probs=143.7
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|+. ++.++.++..++.+|+++|++++++. +.++++++.+|++|.+.+ +++|+++|++||+++++
T Consensus 131 ~~~~g~~---~~~v~~~~~~~~~~~~~~l~~~~~~~------~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~ 201 (386)
T PRK07550 131 LDMLGIR---PVYLPCDEGPGLLPDPAAAEALITPR------TRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALIL 201 (386)
T ss_pred HHhcCCE---EEEEecCCCcCCCCCHHHHHHHhccc------CcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEE
Confidence 3456776 99999985434678999999999764 336677788899999877 78999999999999999
Q ss_pred ecccccccccChhhhhhhcCCC-CC-Ceeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 80 DAAYAGSACICPEFRHFIDGVE-GA-DSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~-~~-D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
|++++................. +. .++..|.+|.++.| ..+|+++.. +..+..... +.....
T Consensus 202 Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~-~~~~~~~~~----~~~~~~---------- 266 (386)
T PRK07550 202 DETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVAS-PARIAEIEK----FMDTVA---------- 266 (386)
T ss_pred eccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecC-HHHHHHHHH----HHhhcc----------
Confidence 9998644221100000111000 11 24578999998744 346777654 433322211 111000
Q ss_pred CceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhc
Q 046506 157 DWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~ 236 (310)
...+ ......+...+.. ..+..++..++..+..+.+.+.|.+.+++.+. +.....+.+.+.....
T Consensus 267 ---~~~s-~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~g~~~~~~~~~~~~~--------- 331 (386)
T PRK07550 267 ---ICAP-RIGQIAVAWGLPN-LADWRAGNRAEIARRRDAFRAVFARLPGWELL-ASGAYFAYVRHPFPDR--------- 331 (386)
T ss_pred ---cCCC-cHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHHhCCCceeC-CCceEEEEecCCCCCC---------
Confidence 0000 1111122222221 12345566677778888899999876676553 3344444444432110
Q ss_pred cccchhHHHHHHHHHHHHHHHHh-cCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 237 NSLLSEEERINEFNRELLESINA-SGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
-..++.+.|.+ .|.....+..+. +..++|+++.. .++++++.+++.|+++
T Consensus 332 ------------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~--~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 332 ------------PSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFAN--ADVAGIGELVERLRAF 384 (386)
T ss_pred ------------CHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeec--CCHHHHHHHHHHHHhh
Confidence 01356666654 454333322222 35689999763 5789999999988775
No 174
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.54 E-value=1.3e-12 Score=122.62 Aligned_cols=258 Identities=12% Similarity=0.088 Sum_probs=152.6
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD 80 (310)
.+.|++ ++.+++.+..++.+|+++|++++++++ ..+++++++|++|.+.| +++|+++|+++|+++++|
T Consensus 159 ~~~g~~---~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~D 229 (430)
T PLN00145 159 VFSGLE---VRHFDLLPERGWEVDLEGVEALADENT------VAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIAD 229 (430)
T ss_pred HHcCCE---EEEeeCCcccCCcCCHHHHHHHhCcCc------eEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 455776 888887654457899999999987653 47888889999999988 888999999999999999
Q ss_pred cccccccccChhhhhh--hcCCCCCCeeeeecccccccc-cceEEEEEeCch-hHHhh--hccCCccccccccccccccC
Q 046506 81 AAYAGSACICPEFRHF--IDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPS-DLVNS--LSTNPEYLKNKATESKQVVD 154 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~--~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~-~~~~~--~~~~~~y~~~~~~~~~~~~~ 154 (310)
.++....+........ .... .-=++..|..|.++.| .-+|++++.++. .+... ...-..+.....
T Consensus 230 e~Y~~~~~~~~~~~~~~~~~~~-~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~~~~-------- 300 (430)
T PLN00145 230 EVYDHLTFGSKPFVPMGVFGEV-APVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLNIST-------- 300 (430)
T ss_pred ccchhhccCCCCccchhhhccc-CcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHhcccC--------
Confidence 9986543321111110 0110 1124568899996665 557777764432 21110 000000100000
Q ss_pred CCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC-ceEEEEEEcCCcchhhhhh
Q 046506 155 YKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH-FAVVCFRVSPSAVMDKLKT 233 (310)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~-~~~v~~~~~~~~~~~~~~~ 233 (310)
+.-.+...++..+++.-..+.+++.+++..+..+.+.+.|++++++.....|. ...+.+.+......
T Consensus 301 -------~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~~----- 368 (430)
T PLN00145 301 -------DPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCLS----- 368 (430)
T ss_pred -------CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChhhcC-----
Confidence 00001112222222211134567788888888999999999888887543344 44444444321000
Q ss_pred hhccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 234 KYENSLLSEEERINEFNRELLESIN-ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
+ .. ...++...+. +.|.+...+...+..+++|+|+. .++++++..++.|++++.+.++
T Consensus 369 --------~---~~-~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~---~~~~~l~~al~rl~~~~~~~~~ 427 (430)
T PLN00145 369 --------G---IK-DDMDFCCKLAKEESVVVLPGSALGMKNWLRITFA---IDPPSLEDGLERLKSFCLRHAK 427 (430)
T ss_pred --------C---CC-CHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeC---CCHHHHHHHHHHHHHHHHHhcc
Confidence 0 00 0134454444 45555554444455689999966 3678899999888888876543
No 175
>PRK15029 arginine decarboxylase; Provisional
Probab=99.54 E-value=9e-13 Score=129.09 Aligned_cols=173 Identities=15% Similarity=0.145 Sum_probs=112.8
Q ss_pred ecCCCCCCEEEEecCCCCC---cccC-----HHHHHHHHHHHHH----cCCCcEEEEEeccCCcccccCChHHHHHHHHH
Q 046506 5 IVGIDVKNFRAIKTTKSSS---YGLS-----PDSLMAKINSDVE----AGLIPLFLCATIGTTAITAVDTLKPLCDVAKQ 72 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~---~~id-----~~~Le~~i~~~~~----~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~ 72 (310)
+.|+. .+++++.-++. +.++ +++++++|.++.. .+.+|..+++ ..+|..|.+.++++|+++||+
T Consensus 264 L~ga~---Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvl-t~PTY~Gv~~di~~I~~~~h~ 339 (755)
T PRK15029 264 LTGAK---PVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVV-TNCTYDGVCYNAKEAQDLLEK 339 (755)
T ss_pred HcCCe---EEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEE-ECCCCcceeeCHHHHHHHHHh
Confidence 44554 77776543211 1244 9999999976542 1234545555 455668999999999999999
Q ss_pred hCcEEEeecccccccccChhhhhhhcCC-------CCCC-eeeeecccccccccceEEEEEeCch------hHHhhh---
Q 046506 73 FGIWVHVDAAYAGSACICPEFRHFIDGV-------EGAD-SFSLNAHKWFFTTLDCCCLWVKDPS------DLVNSL--- 135 (310)
Q Consensus 73 ~g~~l~vD~a~~~~~~~~~~~~~~~~~~-------~~~D-~~~~~~hK~l~~p~g~g~l~v~~~~------~~~~~~--- 135 (310)
+|++|+||.|||+.+.+.+.++.. ..+ .++| +++-|.||++.+..++++++++... .+.+.+
T Consensus 340 ~~~~llvDEAhGah~~F~~~~p~~-sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~~l~~~ 418 (755)
T PRK15029 340 TSDRLHFDEAWYGYARFNPIYADH-YAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMH 418 (755)
T ss_pred cCCeEEEECccccccccCcccccc-ccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHHHHHHH
Confidence 999999999999888766654420 111 3688 8889999999999999999996541 122222
Q ss_pred -ccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCC
Q 046506 136 -STNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKR 206 (310)
Q Consensus 136 -~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~ 206 (310)
+.+|.|... +++-.+.+.+....-++.+++..+.+..+++.|.++++
T Consensus 419 qSTSPSY~Lm------------------------ASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~~ 466 (755)
T PRK15029 419 ATTSPLYAIC------------------------ASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_pred cCCCcHHHHH------------------------HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhccc
Confidence 222332221 12222222332222355677778888889999877765
No 176
>PLN02187 rooty/superroot1
Probab=99.54 E-value=1.2e-12 Score=123.77 Aligned_cols=258 Identities=12% Similarity=0.067 Sum_probs=152.4
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
+...|+. ++.++..+.+.+.+|+++|++++++. +..+++.+++|++|.+.+ +++|+++|++||+++++
T Consensus 172 ~~~~g~~---~~~~~l~~~~~~~~d~~~l~~~~~~~------~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~ 242 (462)
T PLN02187 172 AAYSGLE---VRKFDLLPEKEWEIDLEGIEAIADEN------TVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVIS 242 (462)
T ss_pred HHHcCCE---EEEEeCccccCCccCHHHHHHhcCCC------cEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEE
Confidence 4456776 88998865446789999999988654 347888889999999877 88899999999999999
Q ss_pred ecccccccccChhhhhhhcCCC-CC-Ceeeeecccccccc-cceEEEEEeCchhHH---hhh-ccCCccccccccccccc
Q 046506 80 DAAYAGSACICPEFRHFIDGVE-GA-DSFSLNAHKWFFTT-LDCCCLWVKDPSDLV---NSL-STNPEYLKNKATESKQV 152 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~-~~-D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~---~~~-~~~~~y~~~~~~~~~~~ 152 (310)
|.+++-..+....+... ..+. .. =++..|..|.++.| .-+|+++..++..+. +.+ .....+-...
T Consensus 243 DE~Y~~l~f~~~~~~s~-~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~------- 314 (462)
T PLN02187 243 DEVYDRTIFGDNPFVSM-GKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTP------- 314 (462)
T ss_pred eccccccccCCCCceeH-HHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHHHHHHHHhccccC-------
Confidence 99986543321111110 1110 11 14557899997766 447777765442110 111 1110100000
Q ss_pred cCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC-ceEEEEEEcCCcchhhh
Q 046506 153 VDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH-FAVVCFRVSPSAVMDKL 231 (310)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~-~~~v~~~~~~~~~~~~~ 231 (310)
+.-.+...++.++++.-..+.+++..+...+..+.+.+.|++++++.....|. ++.+.+.+.....
T Consensus 315 ---------~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~---- 381 (462)
T PLN02187 315 ---------DPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLM---- 381 (462)
T ss_pred ---------CCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhhC----
Confidence 00001112222233221235677788888888999999999876553333344 4455554432100
Q ss_pred hhhhccccchhHHHHHHHHHHHHH-HHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 232 KTKYENSLLSEEERINEFNRELLE-SINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~-~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
.+ +. -..++.. .+.+.|.....+...+..+++|+++. +.++.++..++.|.+++++.++
T Consensus 382 ---------~~---~~-~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~---~~~e~l~~al~rL~~~l~~~~~ 441 (462)
T PLN02187 382 ---------DN---IK-DDIDFCVKLAREENLVFLPGDALGLKNWMRITIG---VEAHMLEDALERLKGFCTRHAK 441 (462)
T ss_pred ---------CC---CC-CHHHHHHHHHhhCCEEEECccccCCCCeEEEEeC---CCHHHHHHHHHHHHHHHHHhhh
Confidence 00 00 0123333 34556655554444445689999966 3588999999999998876544
No 177
>PRK07682 hypothetical protein; Validated
Probab=99.54 E-value=1.8e-13 Score=126.39 Aligned_cols=242 Identities=15% Similarity=0.114 Sum_probs=148.2
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD 80 (310)
+..|.. ++.++.++++++.+|+++|++++.+. +.++++..++|++|.+.+ +++|+++|++||+++++|
T Consensus 123 ~~~g~~---~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D 193 (378)
T PRK07682 123 TLAGGV---PVPVATTLENEFKVQPAQIEAAITAK------TKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSD 193 (378)
T ss_pred HHcCCE---EEEeecCCccCCCCCHHHHHhhcCcc------cEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEe
Confidence 445655 88888865435689999999998653 346777788999999865 889999999999999999
Q ss_pred cccccccccChhhhh--hhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 81 AAYAGSACICPEFRH--FIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~--~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
.+++......+ ... .......-.++..|..|.++.| .-+|+++.. +..+....... .+....
T Consensus 194 e~y~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~-~~~i~~l~~~~-~~~~~~------------ 258 (378)
T PRK07682 194 EIYAELTYDEA-YTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAP-VYFSEAMLKIH-QYSMMC------------ 258 (378)
T ss_pred hhhhhcccCCC-CCChhhcccccCCEEEEecCcccccChhhhhhhhhcC-HHHHHHHHHHH-HhhccC------------
Confidence 99875543211 100 0111112346778999999755 237887754 43433221110 010000
Q ss_pred ceeccCCCcchHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEE-EEcCCcchhhhhhh
Q 046506 158 WQITLSRRFRSLKLWFVLRNY--GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCF-RVSPSAVMDKLKTK 234 (310)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~-~~~~~~~~~~~~~~ 234 (310)
...+...++...+ +...+++..++..++.+.+.+.|+++ ++++. +|..+.+.| .+.+...
T Consensus 259 --------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~p~g~~~~~~~~~~~~~------- 321 (378)
T PRK07682 259 --------APTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI-GLTCH-VPGGAFYAFPSISSTGL------- 321 (378)
T ss_pred --------CCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCeeEEEEEeccCCCC-------
Confidence 0112222223333 33456777788888999999999887 77654 445544433 3322110
Q ss_pred hccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeEE--CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESIN-ASGKAYMTHAVL--GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+ ..++.+.+. +.|.....+... .+.+++|+|+. +++++++..++.|+++++.
T Consensus 322 -------~-------~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~---~~~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 322 -------S-------SEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYA---TSLEQLQEAMKRMKRFVEN 376 (378)
T ss_pred -------C-------HHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeC---CCHHHHHHHHHHHHHHHhh
Confidence 0 135666655 455444333222 23579999966 3588999999999887754
No 178
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.53 E-value=2e-12 Score=118.24 Aligned_cols=232 Identities=14% Similarity=0.054 Sum_probs=146.8
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|.. ++.++.+++ +.+|++++++++++. .+.++++++++|++|.+.+.+++.++|++++.++++|++
T Consensus 117 ~~~~g~~---~~~v~~~~~--~~~d~~~l~~~~~~~-----~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~ 186 (351)
T PRK14807 117 SKIAGAV---EIPVKLKED--YTYDVGSFIKVIEKY-----QPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEA 186 (351)
T ss_pred HHHcCCe---EEEeecCCC--CCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCc
Confidence 3456766 889998753 589999999999752 134777788999999999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceec
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
++... ........... .--++..|.+|.++.| .-+|+++ .+++.+.........+.
T Consensus 187 y~~~~--~~~~~~~~~~~-~~vi~~~S~SK~~~~~GlRiG~~v-~~~~~~~~~~~~~~~~~------------------- 243 (351)
T PRK14807 187 YFEFY--GNTIVDVINEF-ENLIVLRTLSKAFGLAGLRVGYAV-ANENILKYLNLVKSPYN------------------- 243 (351)
T ss_pred chhhc--ccchHHHhhhC-CCEEEEecchHhcccchhceeeee-cCHHHHHHHHHccCCCC-------------------
Confidence 96432 11111111111 1236678999999744 4466665 34544332211110000
Q ss_pred cCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccch
Q 046506 162 LSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLS 241 (310)
Q Consensus 162 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
...+...++...+....+++..++..++.+++.+.|.+++++.+. ++..+.+.+.+...
T Consensus 244 ----~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~-~~~~~~~~i~~~~~---------------- 302 (351)
T PRK14807 244 ----INSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGIKVY-PSKTNFILVKFKDA---------------- 302 (351)
T ss_pred ----cCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-cCCccEEEEEcCCH----------------
Confidence 012222333334434456777777778888899999887888764 55565555444321
Q ss_pred hHHHHHHHHHHHHHHHHhcCcEEEEEeE-ECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 242 EEERINEFNRELLESINASGKAYMTHAV-LGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 242 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
.++.+.+.+.|........ ....+++|+++. +.++.++|+++|++++
T Consensus 303 ---------~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 303 ---------DYVYQGLLERGILVRDFSKVEGLEGALRITVS----SCEANDYLINGLKELL 350 (351)
T ss_pred ---------HHHHHHHHHCCEEEEECCCCCCCCCeEEEEcC----CHHHHHHHHHHHHHhh
Confidence 3566777777754322111 123578999954 4678999999998753
No 179
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.53 E-value=1.5e-12 Score=121.23 Aligned_cols=218 Identities=12% Similarity=0.079 Sum_probs=133.4
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
.|+++|+++|.+. +.+|++.+..+++|.+.| +++|+++|++||+++++|++|++.............++
T Consensus 175 ~d~~~le~~i~~~------~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~- 247 (401)
T PRK00854 175 GDAEALEAAITPN------TVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGI- 247 (401)
T ss_pred CCHHHHHHHhCCC------eEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCC-
Confidence 4789999998653 458889999999999887 99999999999999999999973322211111111222
Q ss_pred CCCeeeeeccccccccc-ceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCH
Q 046506 102 GADSFSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGV 180 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 180 (310)
..|.++++ |++.+.. ..|++..+++ .+ +.+.. . . .. .++ ++-+..+..+.++++.+..
T Consensus 248 ~~D~~~~~--K~l~gg~~~ig~v~~~~~-~~-~~l~~---~-~-~~-----------~t~-~~~~~~~aa~~a~L~~l~~ 306 (401)
T PRK00854 248 EADVTLIG--KALSGGFYPVSAVLSNSE-VL-GVLKP---G-Q-HG-----------STF-GGNPLACAVARAALKVLTE 306 (401)
T ss_pred CCCEEEec--ccccCCccCeEEEEEcHH-HH-hcccC---C-C-CC-----------CCC-CcCHHHHHHHHHHHHHHHH
Confidence 36887774 9987642 3565655433 33 22210 0 0 00 001 1111223334444443322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCeEEec--CCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHH
Q 046506 181 ANLRHFLRSHVNMAKLFERLVGSDKRFEVVF--PRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESIN 258 (310)
Q Consensus 181 ~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 258 (310)
+...++..++.+++.+.|+++. ...+. .+...++.+.+.+.. ....++.+.|.
T Consensus 307 ---~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~g~g~~~~i~~~~~~---------------------~~~~~~~~~L~ 361 (401)
T PRK00854 307 ---EGMIENAAEMGAYFLEGLRSIR-SNIVREVRGRGLMLAVELEPEA---------------------GGARQYCEALK 361 (401)
T ss_pred ---cCHHHHHHHHHHHHHHHHHhhc-cCceEEEeccceEEEEEEecCc---------------------hhHHHHHHHHH
Confidence 3356777888899999998763 22221 233445555554321 11246777787
Q ss_pred hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 259 ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 259 ~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
++|. .+.+ .+..++|++++ ..++++||++++++|++.+
T Consensus 362 ~~GV-~v~~---~~~~~lR~~p~-~~~t~e~i~~~i~~l~~~l 399 (401)
T PRK00854 362 ERGL-LAKD---THDHTIRLAPP-LVITREQVDWALEQIAKVL 399 (401)
T ss_pred HCCe-EEec---CCCCEEEEeCC-cccCHHHHHHHHHHHHHHh
Confidence 8874 4432 23469999954 5789999999999998865
No 180
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.53 E-value=2.5e-12 Score=120.10 Aligned_cols=243 Identities=11% Similarity=0.051 Sum_probs=141.6
Q ss_pred EEEEecCCCC----CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccc
Q 046506 13 FRAIKTTKSS----SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 13 v~~v~~~~~~----~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~ 84 (310)
++.+|.++.. ....|+++|++.+.+.. ..+.+++++...+++|.+.| +++|.++|++||+++++|++|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~ 235 (413)
T cd00610 159 VLHVPYPYRYRPPAELADDLEALEEALEEHP---EEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQT 235 (413)
T ss_pred cEEeCCCccccchhhHHHHHHHHHHHHhcCC---CCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 5666665210 12458899999987531 12457777778888899887 9999999999999999999997
Q ss_pred cccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCC
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSR 164 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 164 (310)
+.........-...++ ..|++++ .|+++++..+|+++.+ ++.+ +.+... .+.... + .++-
T Consensus 236 g~g~~g~~~~~~~~~~-~~d~~t~--sK~l~~g~~~g~~~~~-~~~~-~~~~~~-~~~~~~-------------t-~~~~ 295 (413)
T cd00610 236 GFGRTGKMFAFEHFGV-EPDIVTL--GKGLGGGLPLGAVLGR-EEIM-DAFPAG-PGLHGG-------------T-FGGN 295 (413)
T ss_pred CCCcCcchhhHhhcCC-CCCeEEE--cccccCccccEEEEEc-HHHH-HhhccC-CCCCCC-------------C-CCcC
Confidence 5322111100001122 3576655 4999987778888654 4443 322000 000000 0 0111
Q ss_pred CcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCC---eEEecCCCceEEEEEEcCCcchhhhhhhhccccch
Q 046506 165 RFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKR---FEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLS 241 (310)
Q Consensus 165 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~---~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
+....++.++++.+.. +++.++..++.+++++.|+++.. +.........++.+.+...... .
T Consensus 296 ~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------~- 360 (413)
T cd00610 296 PLACAAALAVLEVLEE---EGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRAT-----------K- 360 (413)
T ss_pred HHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCc-----------C-
Confidence 1223344455555433 35667777888888888876421 1111123456777776542100 0
Q ss_pred hHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 242 EEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 242 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
.. + ......+.+.|.+.|. ++.+. +...+|++++ ..+|++||++++++|++.
T Consensus 361 ~~-~-~~~~~~~~~~l~~~gv-~v~~~---~~~~lR~~~~-~~~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 361 PP-D-KELAAKIIKAALERGL-LLRPS---GGNVIRLLPP-LIITEEEIDEGLDALDEA 412 (413)
T ss_pred Cc-c-hHHHHHHHHHHHHCCe-EEeec---CCCEEEEECC-CcCCHHHHHHHHHHHHHh
Confidence 00 0 1223567777878875 44432 1467999965 578999999999999865
No 181
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.53 E-value=1.3e-12 Score=121.36 Aligned_cols=214 Identities=13% Similarity=0.094 Sum_probs=129.4
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|++++++++++. +.+|+++...+++|.+.| +++|.++|++||+++++|++|.+.............++ .
T Consensus 175 d~~~l~~~i~~~------~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~-~ 247 (396)
T PRK04073 175 DLEALKAAITPN------TAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNV-T 247 (396)
T ss_pred CHHHHHHhcccC------eEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCC-C
Confidence 678898888643 357888888899999876 89999999999999999999975433221111001122 3
Q ss_pred CCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
.|++++ .|.++++ .-.|++..+ ++.. +.+... . ... ++ ++-+....+..++++.+..
T Consensus 248 pdi~~~--sK~lg~gg~~ig~~~~~-~~i~-~~~~~~-~-~~~--------------t~-~~~~~~~aaa~aaL~~~~~- 305 (396)
T PRK04073 248 PDMYIL--GKALGGGVFPISCVAAN-RDIL-GVFTPG-S-HGS--------------TF-GGNPLACAVSIAALEVLEE- 305 (396)
T ss_pred CCEEEe--cccccCCCCcceEEEEc-HHHH-hhhcCC-C-CCC--------------CC-CCCHHHHHHHHHHHHHHHh-
Confidence 677765 6988765 346776654 4333 222110 0 000 00 1111222333344543322
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC--CCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSD--KRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA 259 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~--~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 259 (310)
+...++..++.+++.+.|+++ +.+..+ .+...++.+.+... ..++.+.|.+
T Consensus 306 --~~l~~~~~~~~~~l~~~L~~l~~~~i~~~-~~~g~~~~~~~~~~------------------------~~~~~~~l~~ 358 (396)
T PRK04073 306 --EKLPERSLELGEYFKEQLKEIDNPMIKEV-RGRGLFIGVELNEP------------------------ARPYCEALKE 358 (396)
T ss_pred --cCHHHHHHHHHHHHHHHHHhhcCCcccce-ecceEEEEEEecch------------------------HHHHHHHHHH
Confidence 245566677888999998875 222221 22344555554321 1356677777
Q ss_pred cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 260 SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 260 ~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
+|.+ +.+. +..+|||+++ ...|+||+++++++|++.+
T Consensus 359 ~Gv~-~~~~---~~~~iRi~p~-l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 359 EGLL-CKET---HETVIRFAPP-LVITKEELDWAFEKIKAVL 395 (396)
T ss_pred CCeE-EecC---CCCEEEEECC-cccCHHHHHHHHHHHHHHh
Confidence 7754 4332 3468999965 6799999999999998764
No 182
>PRK08912 hypothetical protein; Provisional
Probab=99.53 E-value=1.1e-12 Score=121.47 Aligned_cols=246 Identities=11% Similarity=0.030 Sum_probs=146.5
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++.+|.. ++.+|.+++ ++.+|+++|++.+.+. +.++++++++|++|.+.+ +++|+++|++||+++++
T Consensus 128 ~~~~g~~---~~~~~~~~~-~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~ 197 (387)
T PRK08912 128 IRRAGGV---PRLVRLEPP-HWRLPRAALAAAFSPR------TKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAIC 197 (387)
T ss_pred HHHcCCE---EEEEecCcc-cCcCCHHHHHHHhCcc------ceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEE
Confidence 4556776 889998753 4689999999988653 347777889999999877 77799999999999999
Q ss_pred ecccccccccChhhhhhh--cCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 80 DAAYAGSACICPEFRHFI--DGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~--~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
|.+++........+.... .+...-+++..|.+|.++.| .-+|+++.. +..+.............
T Consensus 198 De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~-~~~~~~l~~~~~~~~~~------------ 264 (387)
T PRK08912 198 DEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAA-PPLLRVLAKAHQFLTFT------------ 264 (387)
T ss_pred hhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecC-HHHHHHHHHHHhhcccc------------
Confidence 999864433211111111 11223468889999988744 237877764 43332221111000000
Q ss_pred CceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCce-EEEEEEcCCcchhhhhhhh
Q 046506 157 DWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFA-VVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~-~v~~~~~~~~~~~~~~~~~ 235 (310)
.+ +.....+..++. ...+.+++..++..+..+.+.+.|++. ++++. ++..+ .+++.+.+...
T Consensus 265 -----~~-~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~l~~~l~~~~~-------- 327 (387)
T PRK08912 265 -----TP-PNLQAAVAYGLG-KPDDYFEGMRADLARSRDRLAAGLRRI-GFPVL-PSQGTYFLTVDLAPLGL-------- 327 (387)
T ss_pred -----CC-hHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCCcceEEEecccccCC--------
Confidence 00 001111112221 123445677788888899999999887 77766 34444 44455543100
Q ss_pred ccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeEE----CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESIN-ASGKAYMTHAVL----GGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~----~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
..-..++.+.+. +.|....++... .+.+++|+++.. .+++++..++.|++.+.
T Consensus 328 -----------~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~---~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 328 -----------AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK---RDATLDEAVERLAAARR 385 (387)
T ss_pred -----------CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC---CHHHHHHHHHHHHHHHh
Confidence 000135666664 455443333222 125799999774 37888888888876553
No 183
>PRK05939 hypothetical protein; Provisional
Probab=99.53 E-value=1.4e-13 Score=127.53 Aligned_cols=193 Identities=12% Similarity=0.124 Sum_probs=118.1
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccccc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAG 85 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~ 85 (310)
.|+. +++++. .|+++++++|+++ +.+|++++.+|++|.+.|+++|+++||++|++++||++|+.
T Consensus 109 ~G~~---v~~v~~-------~d~e~l~~~l~~~------tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~ 172 (397)
T PRK05939 109 LGVE---VTMVDA-------TDVQNVAAAIRPN------TRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTS 172 (397)
T ss_pred cCCE---EEEECC-------CCHHHHHHhCCCC------CeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCccc
Confidence 4554 666654 3689999999765 45888899999999999999999999999999999999976
Q ss_pred ccccChhhhhhhcCCCCCCeeeeecccccccccc-eEEEEEeCchh-HHhhhccCCccccccccccccccCCCC-ceecc
Q 046506 86 SACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD-CCCLWVKDPSD-LVNSLSTNPEYLKNKATESKQVVDYKD-WQITL 162 (310)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-~g~l~v~~~~~-~~~~~~~~~~y~~~~~~~~~~~~~~~~-~~~~~ 162 (310)
+....+. . .++|+++.|+||+++++.+ .|++++.+... ..........|....... ........ .....
T Consensus 173 ~~~~~~~------~-~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 244 (397)
T PRK05939 173 PWLFRPK------D-VGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQ-WGLTQIRKKGLRDM 244 (397)
T ss_pred ccccCcc------c-cCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhh-HHHHHHHHHHHHhc
Confidence 5422111 1 2599999999999998643 23443422210 000000000000000000 00000000 00011
Q ss_pred CCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEec-C-----C-----------CceEEEEEEcC
Q 046506 163 SRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVF-P-----R-----------HFAVVCFRVSP 224 (310)
Q Consensus 163 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~-~-----~-----------~~~~v~~~~~~ 224 (310)
|........|..+ .|.+.+..++++..+++..+++.|++.|.+.-+. | | ..++++|.+.+
T Consensus 245 G~~~~p~~a~l~~--rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~ 321 (397)
T PRK05939 245 GATLSSEAAHRIA--IGAETLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELAD 321 (397)
T ss_pred CCCCCHHHHHHHH--cCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCC
Confidence 1112334444443 4778899999999999999999999999875332 2 1 25678888864
No 184
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.52 E-value=2.1e-12 Score=120.18 Aligned_cols=222 Identities=12% Similarity=0.077 Sum_probs=132.4
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++|++.+... .+.+|+++...+++|.+.| +++|.++|++||+++++|++|++.............++ .
T Consensus 166 d~~~le~~l~~~-----~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~-~ 239 (400)
T PTZ00125 166 DVEALEKLLQDP-----NVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGV-K 239 (400)
T ss_pred CHHHHHHHhCCC-----CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCC-C
Confidence 789999998621 2557777777889999888 99999999999999999999864322221111101222 3
Q ss_pred CCeeeeeccccccccc-ceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
.|.++++ |+++++. .+|+++.+++ .. +.+... .... ++ ++-+.....+.++++.+..+
T Consensus 240 pd~~~~s--K~l~~g~~~ig~v~~~~~-~~-~~~~~~--~~~~--------------t~-~~~~~~~~aa~~~l~~i~~~ 298 (400)
T PTZ00125 240 PDIVLLG--KALSGGLYPISAVLANDD-VM-LVIKPG--EHGS--------------TY-GGNPLACAVAVEALEVLKEE 298 (400)
T ss_pred CCEEEEc--ccccCCCcCcEEEEEcHH-HH-hhccCC--CCCC--------------CC-CcCHHHHHHHHHHHHHHHhc
Confidence 6877764 9998764 6788776544 33 222110 0000 00 11122333334445544333
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC----CCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSD----KRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESI 257 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~----~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (310)
+ ..++..++.+++++.|.++ +.+... .+...++.+.+.... .....++.+.|
T Consensus 299 ~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~~g~~~~v~~~~~~--------------------~~~~~~~~~~l 354 (400)
T PTZ00125 299 K---LAENAQRLGEVFRDGLKELLKKSPWVKEI-RGKGLLNAIVFDHSD--------------------GVNAWDLCLKL 354 (400)
T ss_pred C---HHHHHHHHHHHHHHHHHHHHhcCCCeEEE-ecccEEEEEEEccCc--------------------chHHHHHHHHH
Confidence 3 3445555667777777553 222222 223444455454311 11124567777
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.++|. ++.+. +...+|++++ ...++++|+.+++.|.+.+.++
T Consensus 355 ~~~Gv-~v~~~---~~~~lRi~~~-~~~~~~~i~~~l~~l~~~l~~~ 396 (400)
T PTZ00125 355 KENGL-LAKPT---HDNIIRFAPP-LVITKEQLDQALEIIKKVLKSF 396 (400)
T ss_pred HHCCe-EEeec---CCCEEEEECC-ccCCHHHHHHHHHHHHHHHHHH
Confidence 77774 44432 4578999955 5789999999999999988776
No 185
>PRK07908 hypothetical protein; Provisional
Probab=99.52 E-value=8.1e-13 Score=120.77 Aligned_cols=229 Identities=16% Similarity=0.108 Sum_probs=142.6
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|+. ++.+|++++ +.+|+++++ +. +.++++.+.+|++|.+.|.++|.++|++ +.++++|++
T Consensus 113 ~~~~G~~---i~~v~~~~~--~~~d~~~l~----~~------~~~i~l~np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~ 176 (349)
T PRK07908 113 LRAAGIP---VHRVVLDPP--FRLDPAAVP----DD------ADLVVIGNPTNPTSVLHPAEQLLALRRP-GRILVVDEA 176 (349)
T ss_pred HHHcCCE---EEeeccCcc--cCcChhHhc----cC------CCEEEEcCCCCCCCCCcCHHHHHHHHhc-CCEEEEECc
Confidence 4567777 889999863 578888553 22 3478888999999999999999999964 889999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeee-ecccccc-cccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSL-NAHKWFF-TTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~-~~hK~l~-~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
++-.. ... ... ......-+++.+ |++|.++ ...-+|+++.+ +..+.........+ .
T Consensus 177 y~~~~-~~~-~~~-l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~-~~~~~~~~~~~~~~----~-------------- 234 (349)
T PRK07908 177 FADAV-PGE-PES-LAGDDLPGVLVLRSLTKTWSLAGLRVGYALGA-PDVLARLTRGRAHW----P-------------- 234 (349)
T ss_pred chhhc-cCC-ccc-cccccCCCEEEEeecccccCCccceeeeeecC-HHHHHHHHhcCCCC----C--------------
Confidence 86432 111 111 111112345554 8999886 33447888754 44443322111110 0
Q ss_pred ccCCCcchHHHHHH-HHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhcccc
Q 046506 161 TLSRRFRSLKLWFV-LRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSL 239 (310)
Q Consensus 161 ~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 239 (310)
.+ .....+... ++......+++..++..++.+++.+.|.++ ++++..++..+.+.+.+...
T Consensus 235 -~~--~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~~~~~~~~~~-------------- 296 (349)
T PRK07908 235 -VG--TLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GARVVDPAAAPFVLVRVPDA-------------- 296 (349)
T ss_pred -cc--HHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcEeccCCCceEEEEECCcH--------------
Confidence 00 001111111 111122456677888888899999999887 78877656677776655431
Q ss_pred chhHHHHHHHHHHHHHHHHhcCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 240 LSEEERINEFNRELLESINASGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 240 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
..+.+.+.++|.....+.... +.+++|+|+. +++++++|+++|+++..
T Consensus 297 -----------~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~----~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 297 -----------ELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR----PRAEVPVLVQALAEILK 346 (349)
T ss_pred -----------HHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC----CCccHHHHHHHHHHHHh
Confidence 356666767765444333322 3579999953 57899999999998754
No 186
>PRK07777 aminotransferase; Validated
Probab=99.51 E-value=1.5e-12 Score=120.74 Aligned_cols=246 Identities=13% Similarity=0.053 Sum_probs=145.8
Q ss_pred ceecCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEE
Q 046506 3 AQIVGIDVKNFRAIKTTKS-SSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVH 78 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~-~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~ 78 (310)
++..|.. ++.++.+++ +++.+|+++|++++.+. +.+|+++.++|++|.+.+ +++|+++|++||++++
T Consensus 126 ~~~~g~~---~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li 196 (387)
T PRK07777 126 IAMAGAH---RVPVPLVPDGRGFALDLDALRAAVTPR------TRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVI 196 (387)
T ss_pred HHHCCCE---EEEeecCCccCCCcCCHHHHHHhcCcc------cEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEE
Confidence 3455665 888888764 24679999999998653 346777788899999765 8889999999999999
Q ss_pred eecccccccccChhhhhhh--cCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCC
Q 046506 79 VDAAYAGSACICPEFRHFI--DGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDY 155 (310)
Q Consensus 79 vD~a~~~~~~~~~~~~~~~--~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 155 (310)
+|.+++...+....+.... .+....+++..|++|.++.| ..+|+++.. +..+. .+.....+....
T Consensus 197 ~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~-~~l~~-~~~~~~~~~~~~---------- 264 (387)
T PRK07777 197 TDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGP-APLIA-AVRAAKQYLTYV---------- 264 (387)
T ss_pred EeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecC-HHHHH-HHHHHHhhcccC----------
Confidence 9999865433211111111 11223568889999999865 236776643 43332 221111111100
Q ss_pred CCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhh
Q 046506 156 KDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
.+ ......+..++. .+....++..++..++.+.+.+.|.+. ++++..+.....+.+.+.+...
T Consensus 265 ------~~-~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~g~~~~~~~~~~~~~-------- 327 (387)
T PRK07777 265 ------GG-APFQPAVAHALD-HEDAWVAALRDSLQAKRDRLAAGLAEA-GFEVHDSAGTYFLCADPRPLGY-------- 327 (387)
T ss_pred ------CC-CHHHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHHHHHHhC-CCCccCCCcceEEEecccccCC--------
Confidence 00 011111122222 234556677788888999999999886 7776533333334444432110
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeE-E-----CCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKAYMTHAV-L-----GGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~-----~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
....++.+.|.++..+.+.+.. + .+.+.+|+++. .++++++..++.|+++.
T Consensus 328 ------------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~---~~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 328 ------------DDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFC---KRDDTLDEAIRRLRALR 384 (387)
T ss_pred ------------CCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEec---CCHHHHHHHHHHHHHHh
Confidence 0114567777543334444432 2 12468999965 35888888888887653
No 187
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.51 E-value=5.6e-13 Score=122.06 Aligned_cols=229 Identities=10% Similarity=0.049 Sum_probs=138.8
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh-CcEEEeec
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF-GIWVHVDA 81 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~-g~~l~vD~ 81 (310)
++..|+. ++.+|.++ ++.+|++.++ .+ ++ +.+|++++++|++|.+.|.+++.++++.. ++++++|+
T Consensus 119 ~~~~g~~---v~~v~~~~--~~~~~~~~l~-~~-~~------~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDe 185 (354)
T PRK04635 119 AETFNVG---VKALPLTA--DYQLPLDYIE-QL-DG------AKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDE 185 (354)
T ss_pred HHHcCCE---EEEEecCC--CCCCCHHHHH-hc-cC------CCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeC
Confidence 4567777 99999975 3579999887 33 22 44788889999999999999999998874 79999999
Q ss_pred ccccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 82 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
++.-+... ............+ ++..|++|+++.| ..+|+++.+ ++.+........+|.
T Consensus 186 ay~~~~~~-~s~~~~~~~~~~~-iv~~S~SK~~~l~GlRlG~~i~~-~~~~~~l~~~~~~~~------------------ 244 (354)
T PRK04635 186 AYIEFCPE-YSVADLLASYPNL-VVLRTLSKAFALAGARCGFTLAN-EELIEILMRVIAPYP------------------ 244 (354)
T ss_pred chHhhccC-cchHHHHhhCCCE-EEEechHHHhhhhHHHHhhhhCC-HHHHHHHHhhcCCCC------------------
Confidence 98644311 1111111111111 4568999998633 346887654 434432211111110
Q ss_pred ccCCCcchHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhcc
Q 046506 161 TLSRRFRSLKLWFVLRNY---GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYEN 237 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 237 (310)
.......+++..+ +.+.+++..++..+..+++.+.|.+++++++. ++..+.+.+.+...
T Consensus 245 -----~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~g~f~~~~~~~~------------ 306 (354)
T PRK04635 245 -----VPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVL-EGNGNYVLAKFDDV------------ 306 (354)
T ss_pred -----CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCcEEEEECCCH------------
Confidence 0111112222222 23445556667777788899999988667765 45555555544321
Q ss_pred ccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 238 SLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
.++.+.+.+.|............+++|+|+ .+++|+++++++|++.
T Consensus 307 -------------~~~~~~l~~~gv~v~~~~~~~~~~~lRis~----~~~e~~~~l~~al~~~ 352 (354)
T PRK04635 307 -------------DAVFKALWDAGIVARAYKDPRLANCIRFSF----SNRAETDKLIGLIRNQ 352 (354)
T ss_pred -------------HHHHHHHHHCCEEEEECCCCCCCCeEEEEe----CCHHHHHHHHHHHHHh
Confidence 345566666765332221112346899994 3689999999999753
No 188
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.50 E-value=3.2e-12 Score=116.90 Aligned_cols=232 Identities=13% Similarity=0.048 Sum_probs=144.2
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh-CcEEEeec
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF-GIWVHVDA 81 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~-g~~l~vD~ 81 (310)
++..|+. ++.+|.++ ++.+|+++|++ . ...+++..++|++|.+.|.+++.++++.+ |+++++|.
T Consensus 118 ~~~~g~~---~~~v~~~~--~~~~d~~~l~~----~------~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe 182 (353)
T PRK05387 118 AGLYGIP---YEEIPLDD--DFSIDVEDYLR----P------NGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDE 182 (353)
T ss_pred HHHcCCE---EEEeecCC--CCCCCHHHHHh----c------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeC
Confidence 3556776 88999875 35899999863 1 12678888999999999999999999886 99999999
Q ss_pred ccccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 82 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
+++.+. ........... .-.++..|++|.++.| .-+|+++. ++..+.........+ ...
T Consensus 183 ~y~~~~--~~~~~~~~~~~-~~~i~~~S~SK~~~~~GlR~G~~~~-~~~~~~~l~~~~~~~-~~~--------------- 242 (353)
T PRK05387 183 AYVDFG--GESAIPLIDRY-PNLLVVQTFSKSRSLAGLRVGFAIG-HPELIEALNRVKNSF-NSY--------------- 242 (353)
T ss_pred cccccC--CcchHHHHhhC-CCEEEEEehhHhhcchhhhceeeec-CHHHHHHHHHhhccC-CCC---------------
Confidence 985332 11111111111 2357889999998754 34677764 454433221111000 000
Q ss_pred ccCCCcchHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhcccc
Q 046506 161 TLSRRFRSLKLWFVLRNY-GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSL 239 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 239 (310)
........++...+ ..+.+++..++..++.+++.+.|+++ ++.+. ++..+++.+...+.+
T Consensus 243 ----~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~------------- 303 (353)
T PRK05387 243 ----PLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL-GFEVL-PSKANFVFARHPSHD------------- 303 (353)
T ss_pred ----CcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCcCcEEEEECCCCC-------------
Confidence 00112222222333 23456777888888999999999887 77764 455666655543211
Q ss_pred chhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 240 LSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 240 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
..++.+.|.++|............+++|+++. +++++++++++|+++..
T Consensus 304 ----------~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~----~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 304 ----------AAELAAKLRERGIIVRHFNKPRIDQFLRITIG----TDEEMEALVDALKEILA 352 (353)
T ss_pred ----------HHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC----CHHHHHHHHHHHHHHhh
Confidence 13566777777754322111123568999954 46899999999988653
No 189
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.50 E-value=1.8e-12 Score=120.48 Aligned_cols=189 Identities=11% Similarity=0.056 Sum_probs=115.3
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD 80 (310)
...|+. ++.+|.++++.+.+|+++|++.+.+. +.++++++++|++|.+.+ +++|+++|++||+++++|
T Consensus 139 ~~~g~~---~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~D 209 (394)
T PRK05942 139 LIAGAQ---IYPIILKPENDWLIDLSSIPEEVAQQ------AKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHD 209 (394)
T ss_pred HHcCCE---EEEeecCCccCCccCHHHHHHhcccc------ceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEe
Confidence 456666 89999986545679999999998654 447777788999999988 888999999999999999
Q ss_pred cccccccccChhhhhh--hcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 81 AAYAGSACICPEFRHF--IDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~--~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
++++-........... ........++..|+.|.++.| ..+|+++. ++..+....... .+.....
T Consensus 210 e~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~-~~~l~~~l~~~~-~~~~~~~----------- 276 (394)
T PRK05942 210 LCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVG-NRHIIQGLRTLK-TNLDYGI----------- 276 (394)
T ss_pred ccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeec-CHHHHHHHHHHH-hhcccCC-----------
Confidence 9986443321110110 011112345567888988644 44788865 444443221111 0000000
Q ss_pred ceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCce-EEEEEEc
Q 046506 158 WQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFA-VVCFRVS 223 (310)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~-~v~~~~~ 223 (310)
+ ......+..+++ ......++..++..++.+.+.+.|.+. ++.+. ++..+ .+.+.++
T Consensus 277 -----~-~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~~~~~~f~~~~~~ 334 (394)
T PRK05942 277 -----F-SALQKAAETALQ-LPDSYLQQVQERYRTRRDFLIQGLGEL-GWNIP-PTKATMYLWVPCP 334 (394)
T ss_pred -----C-HHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHC-CCeec-CCCeeeEEEEECC
Confidence 0 011122223332 124456777778888888899999876 77765 44555 3444444
No 190
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.50 E-value=5.6e-13 Score=121.90 Aligned_cols=230 Identities=13% Similarity=0.114 Sum_probs=141.9
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh--CcEEEe
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF--GIWVHV 79 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~--g~~l~v 79 (310)
+++..|+. ++.+|.++ ++.+|++++++++. . +.+|++..++|++|.+.+.+++.++++.. +.++++
T Consensus 115 ~~~~~G~~---~~~v~~~~--~~~~d~~~l~~~~~-~------~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~viv 182 (351)
T PRK01688 115 SAETIGVE---IRTVPTLD--NWQLDLPAIADNLD-G------VKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVA 182 (351)
T ss_pred HHHHcCCE---EEEeecCC--CCCCCHHHHHHhcc-C------CcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEE
Confidence 35567877 89999975 36899999999873 2 34777889999999999877766666532 689999
Q ss_pred ecccccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCc
Q 046506 80 DAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDW 158 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 158 (310)
|+|+.-+... ........... -=++.-|++|+++.| .-+|+++. +++.+........+|-
T Consensus 183 DEay~~f~~~-~s~~~~~~~~~-n~iv~rSfSK~~glaGlRiGy~i~-~~~~i~~l~~~~~~~~---------------- 243 (351)
T PRK01688 183 DEAYIEFCPQ-ASLAGWLAEYP-HLVILRTLSKAFALAGLRCGFTLA-NEEVINLLLKVIAPYP---------------- 243 (351)
T ss_pred ECchhhcCCC-CChHHHHhhCC-CEEEEecchHhhcCHHHHHhHHhC-CHHHHHHHHhccCCCC----------------
Confidence 9998544311 11111111111 124668999988744 33577764 4444432211111110
Q ss_pred eeccCCCcchHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhh
Q 046506 159 QITLSRRFRSLKLWFVLRNYG---VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
. ..+...++...+. .+.+++..++..+..+++.+.|.++++++.+.++..+.+.+.+.+.
T Consensus 244 ---v----~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~~~---------- 306 (351)
T PRK01688 244 ---L----STPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFTAS---------- 306 (351)
T ss_pred ---C----CHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcCCH----------
Confidence 0 1111112222222 2455666777777888999999888887544466777766655421
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE-CCEeEEEEEccCCCCCHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKAYMTHAVL-GGIYAIRFAAGATLTEERHVMVAWTVVQ 298 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~~~~~iRis~~~~~~t~edi~~li~~l~ 298 (310)
.++.+.|.++|......... +..+++|+|+. +++|+++|+++|+
T Consensus 307 ---------------~~l~~~L~~~gi~vr~~~~~~~~~~~iRis~~----~~~e~~~l~~al~ 351 (351)
T PRK01688 307 ---------------SAVFKSLWDQGIILRDQNKQPGLSNCLRITIG----TREECQRVIDALR 351 (351)
T ss_pred ---------------HHHHHHHHHCCeEEEECCCcCCCCCeEEEeCC----CHHHHHHHHHhhC
Confidence 46777787887654433222 23568999955 5799999999874
No 191
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.50 E-value=1.7e-12 Score=120.27 Aligned_cols=161 Identities=16% Similarity=0.143 Sum_probs=111.8
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
..+|+. +++++.. +.++++++|+++ +.+|++..++|++|.+.++++|+++|+++|+++++|++|
T Consensus 126 ~~~Gi~---v~~vd~~-------~~~~l~~~i~~~------tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~ 189 (394)
T PRK07050 126 RDFGIT---VRFYDPL-------IGAGIADLIQPN------TRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTY 189 (394)
T ss_pred HhcCeE---EEEECCC-------CHHHHHHhcCCC------CeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCc
Confidence 345665 6666542 346788888764 448888889999999999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceec
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
+.+....+ .. .++|+++.|.+|++++..+ .|++++++++...+..... .+++
T Consensus 190 a~~~~~~~----l~---~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~-~~~G------------------ 243 (394)
T PRK07050 190 SAGLAFKP----FE---HGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLAR-MRLG------------------ 243 (394)
T ss_pred ccccccCH----HH---cCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHH-HhcC------------------
Confidence 77654222 11 1589999999999987655 4556666665443321110 0110
Q ss_pred cCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEe
Q 046506 162 LSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVV 210 (310)
Q Consensus 162 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~ 210 (310)
-...+...|.+++ +...+..++++.++++..+.+.|++.|++.-+
T Consensus 244 --~~~~~~~a~l~lr--~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v 288 (394)
T PRK07050 244 --IGVSADDCSLVLR--GLPSLQVRLAAHDRSALEVAEWLKARPEIATV 288 (394)
T ss_pred --CCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 0112344455544 44567779999999999999999998887643
No 192
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.50 E-value=1.6e-11 Score=116.92 Aligned_cols=254 Identities=13% Similarity=0.077 Sum_probs=147.8
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEeecc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD~a 82 (310)
.|+. ++.||+++++++.+|++++++++....+.+..+.+++++.++|++|.+.+ +++|+++|++||+++++|.+
T Consensus 164 ~G~~---vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEi 240 (496)
T PLN02376 164 TGVE---IIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEI 240 (496)
T ss_pred CCCE---EEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcC
Confidence 5676 99999976445689999999887654332334667788889999999988 56688899999999999999
Q ss_pred cccccccChhhhh---hhcCC--C--CCC--eeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccc
Q 046506 83 YAGSACICPEFRH---FIDGV--E--GAD--SFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQV 152 (310)
Q Consensus 83 ~~~~~~~~~~~~~---~~~~~--~--~~D--~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~ 152 (310)
++...+..+.+.. ..... . ..+ .+..|.+|.++.| .-+|+++..++.. .........+.. .
T Consensus 241 Y~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l-~~~~~~~~~~~~-v------- 311 (496)
T PLN02376 241 YAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSV-VSCARKMSSFGL-V------- 311 (496)
T ss_pred ccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHH-HHHHHHHhhcCC-C-------
Confidence 9765432211111 11110 0 112 2357999999755 6688887755543 232211101100 0
Q ss_pred cCCCCceeccCCCcchHHHHHHHHHhCHHH-----HHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcc
Q 046506 153 VDYKDWQITLSRRFRSLKLWFVLRNYGVAN-----LRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAV 227 (310)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~ 227 (310)
..+...++...+.... +.+..++..+..+.+.+.|.+. ++.+..+..+..+.+.+.....
T Consensus 312 --------------s~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~~~~aG~flwi~l~~~~~ 376 (496)
T PLN02376 312 --------------SSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-DIACLTSNAGLFAWMDLRHLLR 376 (496)
T ss_pred --------------CHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCceEEEEEEchhhhc
Confidence 1112222222332222 2233555666677788888775 7776543333445555533100
Q ss_pred hhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEE-eEE--CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 228 MDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTH-AVL--GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~~~--~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+... .....++.+.+.++.++.+.| ... ...+++|+++.+ .+++.++..++.|++++.+
T Consensus 377 --------------~~~~-~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~--~~~~~l~~al~rl~~~l~~ 438 (496)
T PLN02376 377 --------------DRNS-FESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFAN--MDDDTLHVALGRIQDFVSK 438 (496)
T ss_pred --------------cCCc-hhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeC--CCHHHHHHHHHHHHHHHHH
Confidence 0000 011135666666653344444 333 235799999774 4578899999888887753
No 193
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.50 E-value=1.5e-12 Score=119.39 Aligned_cols=231 Identities=12% Similarity=0.086 Sum_probs=143.5
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHH--hCcEEEee
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQ--FGIWVHVD 80 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~--~g~~l~vD 80 (310)
+...|.. ++.+|.+ + +.+|++++++++++. +.++++.+++|++|.+.|.++|.++++. +|+++++|
T Consensus 122 ~~~~g~~---~~~~~~~-~--~~~d~~~l~~~~~~~------~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~D 189 (359)
T PRK03158 122 AIIEGAE---VREVPLK-D--GGHDLEAMLKAIDEQ------TKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLD 189 (359)
T ss_pred HHHcCCe---EEEEecC-C--CCcCHHHHHHhcCCC------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEE
Confidence 3455666 8999997 2 379999999988653 3467778899999999999999998887 59999999
Q ss_pred cccccccccCh--hhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 81 AAYAGSACICP--EFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 81 ~a~~~~~~~~~--~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
.++........ ......... .-.++..|+.|.++.| .-+|+++. +++.+.........+ .
T Consensus 190 e~y~~~~~~~~~~~~~~~~~~~-~~vi~~~S~SK~~g~~GlRiG~~v~-~~~~~~~~~~~~~~~----~----------- 252 (359)
T PRK03158 190 EAYYEYVTAEDYPDTLPLLEKY-ENLIVLRTFSKAYGLAALRVGYGIA-SEELIEKLNIARPPF----N----------- 252 (359)
T ss_pred CchHhhcCCcccccHHHHHHhc-CCEEEEEechHhhcCcchhhehhcC-CHHHHHHHHHhcCCC----C-----------
Confidence 99865443211 000111111 2346668999998755 33477664 444443221111111 0
Q ss_pred ceeccCCCcchHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhc
Q 046506 158 WQITLSRRFRSLKLWFVLRNYG-VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~ 236 (310)
...++..++...+. .+..++..+...+..+++.+.|.+. ++.+. ++..+.+.+.+...
T Consensus 253 --------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~~g~~i~~~~~~~----------- 311 (359)
T PRK03158 253 --------TTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEY-GLFYY-PSQTNFIFVDTGRD----------- 311 (359)
T ss_pred --------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeC-CCcCcEEEEECCCC-----------
Confidence 12223333333332 2345555666677777888888876 77765 44555555544211
Q ss_pred cccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 237 NSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
..++.+.|.+.|.....+...+..+++|+++. ++++++.++++|+++
T Consensus 312 -------------~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~----~~~~~~~l~~al~~~ 358 (359)
T PRK03158 312 -------------ANELFEALLKKGYIVRSGAALGFPTGVRITIG----LKEQNDKIIELLKEL 358 (359)
T ss_pred -------------HHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC----CHHHHHHHHHHHHHh
Confidence 13566777777754444333334578999944 688999999999875
No 194
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.49 E-value=2.4e-12 Score=118.61 Aligned_cols=247 Identities=13% Similarity=0.125 Sum_probs=147.4
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCc-cccc---CChHHHHHHHHHhCcEEEeecccccc-cccCh----hh
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTA-ITAV---DTLKPLCDVAKQFGIWVHVDAAYAGS-ACICP----EF 93 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~-~G~~---~pl~~I~~l~~~~g~~l~vD~a~~~~-~~~~~----~~ 93 (310)
++.+|+++|+++|++....+ .+ +|+++...|. .|.. .++++|.++|++||+++|.|+|+..+ +++.. .+
T Consensus 151 ~GniD~~~Le~aI~~~~~~~-~~-lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~ 228 (450)
T TIGR02618 151 KGNVDLKKLQKLIDEVGADK-IP-YICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGY 228 (450)
T ss_pred CCCcCHHHHHHHhccccCcc-cC-ceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccc
Confidence 46899999999998643212 22 4555444444 4676 55899999999999999999999773 33221 11
Q ss_pred h-----hhhcC-CCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcc
Q 046506 94 R-----HFIDG-VEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFR 167 (310)
Q Consensus 94 ~-----~~~~~-~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (310)
. +.... ..++|.+++|+||.+++|. .|++.+++++++.+.......| .+. ..+..-.+|..
T Consensus 229 ~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~-GG~l~~~d~~l~~k~r~~~~~~-eG~----------~tyGgla~r~~- 295 (450)
T TIGR02618 229 EDKSIAEILKEMMSYADGCTMSGKKDCLVNI-GGFLCMNDDEMFQSAKELVVVF-EGM----------PSYGGLAGRDM- 295 (450)
T ss_pred cCCCHHHHHHHHhccCcEEEEeeccCCCCCC-ceEEEeCCHHHHHHHHHHhhhc-CCc----------cccCchhhhhH-
Confidence 1 11111 3469999999999999997 3555568887765553332222 110 00010111111
Q ss_pred hHHHHHHHHHhCHHHH-HHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHH
Q 046506 168 SLKLWFVLRNYGVANL-RHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERI 246 (310)
Q Consensus 168 ~~~~~~~l~~~~~~~~-~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (310)
.++..++. +.. ....++....+++|.+.|.+. |+.++.++.++.|.+.......+ .+.++
T Consensus 296 -~ala~gL~----e~~~~~y~~~r~~~a~~La~~L~~~-Gvpv~~p~ggh~V~vda~~~lph------------~~~~~- 356 (450)
T TIGR02618 296 -EAMAIGIR----EAVDYEYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVFLDARRFLPH------------IPQDQ- 356 (450)
T ss_pred -HHHHHHHH----HhhhHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCcceEEEEhHHhCCC------------CChhh-
Confidence 11122222 222 245566667799999999987 99998788888887766541100 01111
Q ss_pred HHHHHHHHHHHHh-cCcEEEE-EeE-----EC-------CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 247 NEFNRELLESINA-SGKAYMT-HAV-----LG-------GIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 247 ~~~~~~l~~~l~~-~g~~~~~-~~~-----~~-------~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
--.+.+.-.|.. .|+-.+. ++. ++ ....+|+.+..---|.+++|.+.+++.++.++.
T Consensus 357 -~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~ 427 (450)
T TIGR02618 357 -FPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHR 427 (450)
T ss_pred -ChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhH
Confidence 112344444443 3432222 111 11 136899998866678899999999999988653
No 195
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.49 E-value=9.5e-13 Score=121.07 Aligned_cols=171 Identities=19% Similarity=0.213 Sum_probs=113.9
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
..|+. ++++++++.+.+.+++ . .+.+|.+.+.+|.++.+.|+++|+++||++| ++||++++
T Consensus 126 ~~Gi~---v~fvd~~~~~~~~l~~---------~-----~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~ 186 (384)
T PRK06434 126 TLGIH---VDYIDTDRLNSLDFDP---------S-----NYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFA 186 (384)
T ss_pred hcCcE---EEEECCCChhheeecC---------C-----CeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCC
Confidence 45666 8888876422222222 1 1458888999999999999999999999998 56799996
Q ss_pred cccccChhhhhhhcCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceecc
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITL 162 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 162 (310)
.+...-+. + .++|++++|+||+++++.+ .|++..++++...+..... .. .
T Consensus 187 s~~~~~pl------~-~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~----~~-----------------~ 238 (384)
T PRK06434 187 SPYNQNPL------D-LGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERR----KT-----------------L 238 (384)
T ss_pred CcccCCch------h-cCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHH----Hh-----------------c
Confidence 55432121 1 2699999999999998765 5666565554332221110 00 0
Q ss_pred CCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC-----------CceEEEEEEcC
Q 046506 163 SRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR-----------HFAVVCFRVSP 224 (310)
Q Consensus 163 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------~~~~v~~~~~~ 224 (310)
|.....+.+|.. ..+...++.++++.+++++.+.+.|.++|.++-+.-| ..++++|.+.+
T Consensus 239 G~~~~~~~A~l~--~~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~ 309 (384)
T PRK06434 239 GSNPDPIQAYLA--LRGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRS 309 (384)
T ss_pred CCCCCHHHHHHH--HhCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECC
Confidence 111123333433 3466889999999999999999999999988533222 25688888863
No 196
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.49 E-value=2.3e-13 Score=124.80 Aligned_cols=177 Identities=20% Similarity=0.233 Sum_probs=111.9
Q ss_pred ecCCCCCCEEEEecCCCC---CcccCH-----HHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcE
Q 046506 5 IVGIDVKNFRAIKTTKSS---SYGLSP-----DSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIW 76 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~---~~~id~-----~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~ 76 (310)
+.|+. .+++++..++ .+.+++ +.++++|++...... +.+|++ ..+|..|.+.++++|+++||++|+.
T Consensus 125 l~ga~---Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~-~~~vvl-t~PTY~Gv~~di~~I~~~~h~~~~~ 199 (417)
T PF01276_consen 125 LSGAI---PVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKA-PRLVVL-TSPTYYGVCYDIKEIAEICHKHGIP 199 (417)
T ss_dssp HHTEE---EEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHC-ESEEEE-ESS-TTSEEE-HHHHHHHHCCTECE
T ss_pred HcCCe---EEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccC-ceEEEE-eCCCCCeEEECHHHHHHHhcccCCE
Confidence 34554 7777775221 114566 999999988644221 334555 4556689999999999999999999
Q ss_pred EEeecccccccccChhhhhhhcCCCCCC-------eeeeecccccccccceEEEEEeCch-h----HHhhh----ccCCc
Q 046506 77 VHVDAAYAGSACICPEFRHFIDGVEGAD-------SFSLNAHKWFFTTLDCCCLWVKDPS-D----LVNSL----STNPE 140 (310)
Q Consensus 77 l~vD~a~~~~~~~~~~~~~~~~~~~~~D-------~~~~~~hK~l~~p~g~g~l~v~~~~-~----~~~~~----~~~~~ 140 (310)
|+||+|||+...+.+...... . .++| +++-|.||++.+..+++++++++.. . +.+.+ +.+|.
T Consensus 200 llvDEAhGah~~F~~lp~~a~-~-~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPS 277 (417)
T PF01276_consen 200 LLVDEAHGAHFGFHPLPRSAL-A-LGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPS 277 (417)
T ss_dssp EEEE-TT-TTGGCSGGGTTCS-S-TTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--
T ss_pred EEEEccccccccCCCCccchh-h-ccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHHcCCChH
Confidence 999999988877664333221 1 3699 9999999999999999999999874 2 21211 22333
Q ss_pred cccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH---cCCCCeEEecC
Q 046506 141 YLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLV---GSDKRFEVVFP 212 (310)
Q Consensus 141 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L---~~~~~~~v~~~ 212 (310)
|+.. +++-.+.+.+....-++++++..++++.+++.| .++++|+++.+
T Consensus 278 Y~lm------------------------ASlD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~ 328 (417)
T PF01276_consen 278 YPLM------------------------ASLDVARAQMEEEEGRELLEEAIELAEEFRKKINRLNDIWGFKVLGP 328 (417)
T ss_dssp HHHH------------------------HHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-
T ss_pred HHHH------------------------HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCCc
Confidence 3221 222233333433444567778888888899988 67888888765
No 197
>PRK09265 aminotransferase AlaT; Validated
Probab=99.49 E-value=4.2e-12 Score=118.38 Aligned_cols=250 Identities=9% Similarity=0.013 Sum_probs=141.1
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD 80 (310)
+..|.. ++.++++.++++.+|++++++++++. +.++++++++|++|.+.+ +++|+++|+++|+++++|
T Consensus 137 ~~~g~~---~v~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~D 207 (404)
T PRK09265 137 SLSGGK---PVHYLCDEEAGWFPDLDDIRSKITPR------TKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFAD 207 (404)
T ss_pred HHcCCE---EEEEecccccCCCCCHHHHHHhcccc------ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 345555 77888775445689999999998654 347788889999999998 899999999999999999
Q ss_pred cccccccccChhhhhhhcCCCCCCee-eeecccccccc-cceEEEEEe-CchhHH---hhhccCCccccccccccccccC
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSF-SLNAHKWFFTT-LDCCCLWVK-DPSDLV---NSLSTNPEYLKNKATESKQVVD 154 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~-~~~~hK~l~~p-~g~g~l~v~-~~~~~~---~~~~~~~~y~~~~~~~~~~~~~ 154 (310)
.+++..............-.....++ ..|..|.++.| .-+|+++.. ++...+ +.+... .+...
T Consensus 208 e~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~-~~~~~---------- 276 (404)
T PRK09265 208 EIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDML-ASMRL---------- 276 (404)
T ss_pred hhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHHH-hcccc----------
Confidence 99864432211111110101112334 46678998655 336777653 332111 111000 00000
Q ss_pred CCCceeccCCCcchHHHHHHHHHhCH-HHHHHHH---HHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhh
Q 046506 155 YKDWQITLSRRFRSLKLWFVLRNYGV-ANLRHFL---RSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDK 230 (310)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~---~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~ 230 (310)
. ...+...++...+.. +.+++.. ++..+..+.+.+.|.+++++++..+.....+.+.+.+...
T Consensus 277 ------~----~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~~~~~~~--- 343 (404)
T PRK09265 277 ------C----ANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALYAFPKLDPKVY--- 343 (404)
T ss_pred ------C----CCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEEeccccc---
Confidence 0 011112222222221 2222222 3555667788888888778776533334445445543100
Q ss_pred hhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE--CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 231 LKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVL--GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+. ......+...+.+.|.....+... .+.+++|+++. .++|+++..++.|++.+..
T Consensus 344 -----------~~---~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~---~~~e~l~~~l~rl~~~l~~ 401 (404)
T PRK09265 344 -----------PI---HDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTL---PRVDDLEEAIGRIGRFLSG 401 (404)
T ss_pred -----------CC---CCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeC---CCHHHHHHHHHHHHHHHHH
Confidence 00 000123445556666544433332 23578999963 5789999999999887754
No 198
>PRK08363 alanine aminotransferase; Validated
Probab=99.49 E-value=4.1e-12 Score=118.21 Aligned_cols=250 Identities=11% Similarity=0.084 Sum_probs=146.1
Q ss_pred ceecCCCCCCEEEE-ecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEE
Q 046506 3 AQIVGIDVKNFRAI-KTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVH 78 (310)
Q Consensus 3 a~~~g~~~~~v~~v-~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~ 78 (310)
++.+|.. ++.+ +.+++ .+.+|+++|++++.+. +.++++++++|.+|.+.+ +++|+++|+++|++++
T Consensus 134 ~~~~g~~---~v~~~~~~~~-~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li 203 (398)
T PRK08363 134 VKFYGGV---PVEYRTIEEE-GWQPDIDDIRKKITEK------TKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVI 203 (398)
T ss_pred HHHcCCE---EEEecccccc-CCcCCHHHHHhhCCcc------eEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEE
Confidence 3445554 6666 45443 4679999999998654 347778899999999887 8899999999999999
Q ss_pred eecccccccccChhhhhhhcCCCCC-C-eeeeeccccccc-ccceEEEEEe-CchhHHhhhccCCccccccccccccccC
Q 046506 79 VDAAYAGSACICPEFRHFIDGVEGA-D-SFSLNAHKWFFT-TLDCCCLWVK-DPSDLVNSLSTNPEYLKNKATESKQVVD 154 (310)
Q Consensus 79 vD~a~~~~~~~~~~~~~~~~~~~~~-D-~~~~~~hK~l~~-p~g~g~l~v~-~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 154 (310)
+|++++......+ ... ...+... . ++..|.+|+++. ...+|++++. ++..+.........+...
T Consensus 204 ~Deay~~~~~~~~-~~~-~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~---------- 271 (398)
T PRK08363 204 SDEIYDLMTYEGK-HVS-PGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREAIDKLARI---------- 271 (398)
T ss_pred EhhhhhhhccCCc-ccC-HHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHHHHHHHhcc----------
Confidence 9999864432111 100 1111111 2 345799999654 4668888873 333222211000000000
Q ss_pred CCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEE-EEcCCcchhhhhh
Q 046506 155 YKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCF-RVSPSAVMDKLKT 233 (310)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~-~~~~~~~~~~~~~ 233 (310)
.+..+ ......+..++.. ..+.+++..++..++.+.+.+.|.+++++.+. +|..+.+.| .+.+...
T Consensus 272 ----~~~~s-~~~q~~~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~-~p~g~~~~~~~l~~~~~------ 338 (398)
T PRK08363 272 ----RLCPN-TPAQFAAIAGLTG-PMDYLEEYMKKLKERRDYIYKRLNEIPGISTT-KPQGAFYIFPRIEEGPW------ 338 (398)
T ss_pred ----cccCC-hHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCEec-CCCeEEEEEEEeccCCC------
Confidence 00000 0111222223321 24567777888888889999999888887764 556665555 4443100
Q ss_pred hhccccchhHHHHHHHHHHH-HHHHHhcCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 234 KYENSLLSEEERINEFNREL-LESINASGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l-~~~l~~~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.+ ..++ ...+.+.|.....+.... +.+++|+|+. .++++++..++.|++++...
T Consensus 339 -------~~-------~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~---~~~~~l~~~l~~l~~~~~~~ 395 (398)
T PRK08363 339 -------KD-------DKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFL---PPVEILEEAMDRFEEFMRER 395 (398)
T ss_pred -------CC-------HHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHh
Confidence 00 0233 333456665444433332 3469999964 35888999999998877553
No 199
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.48 E-value=4.8e-12 Score=121.52 Aligned_cols=249 Identities=10% Similarity=0.015 Sum_probs=144.6
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
+.++|.. ++.+++++++++.+|+++|++++++++ .++++..++|++|.+.+ +++|+++|++||+++++
T Consensus 249 ~~~~g~~---~v~~~~~~~~~~~~d~~~l~~~~~~~~------k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~ 319 (517)
T PRK13355 249 VNLAGGT---AVHYRCDEQSEWYPDIDDIRSKITSRT------KAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFS 319 (517)
T ss_pred HHHCCCE---EEEeecCcccCCCCCHHHHHHhcCcCc------eEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEE
Confidence 4456766 899999876568899999999997653 47888889999999988 88899999999999999
Q ss_pred ecccccccccChhhhhhhcCCCCCCeee-eecccccccc-cceEEEEEe-CchhHH---hhhccCCcccccccccccccc
Q 046506 80 DAAYAGSACICPEFRHFIDGVEGADSFS-LNAHKWFFTT-LDCCCLWVK-DPSDLV---NSLSTNPEYLKNKATESKQVV 153 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~~~D~~~-~~~hK~l~~p-~g~g~l~v~-~~~~~~---~~~~~~~~y~~~~~~~~~~~~ 153 (310)
|.++.-..+....+..........-+++ .|+.|.++.| .-+|++++. ++..+. ..+..... ...
T Consensus 320 DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~-~~~--------- 389 (517)
T PRK13355 320 DEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNMLAN-MRL--------- 389 (517)
T ss_pred ehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHHHHhc-CcC---------
Confidence 9998644332211111111111121332 5779997654 337887764 232211 11100000 000
Q ss_pred CCCCceeccCCCcchHHHHHHHHHhCH-----HHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEE-EEcCCcc
Q 046506 154 DYKDWQITLSRRFRSLKLWFVLRNYGV-----ANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCF-RVSPSAV 227 (310)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~-~~~~~~~ 227 (310)
+ ......+++...+.. +.+.+ .++..+..+++.+.|.++|++++. +|..+.+.| .+.....
T Consensus 390 --------~---~~~~~q~a~~~aL~~~~~~~~~~~~-~~~~~~~r~~l~~~L~~~~g~~~~-~p~g~fy~~~~l~~~~~ 456 (517)
T PRK13355 390 --------C---SNVPAQSIVQTALGGHQSVKDYLVP-GGRVYEQRELVYNALNAIPGISAV-KPKAAFYIFPKIDVKKF 456 (517)
T ss_pred --------C---cChHHHHHHHHHhcCCccHHHHHHH-HHHHHHHHHHHHHHHhcCCCcccC-CCCeeeEEEeecCcccC
Confidence 0 111222222222321 12222 234445567888999888888865 566666555 4432100
Q ss_pred hhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE--CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 228 MDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVL--GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+.. . -.+.+.+.|.+.|.....+... .+.+++|+|+. .++++++..++.|++.+..
T Consensus 457 ------------~~~----~-~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~---~~~~~l~~a~~rl~~~~~~ 514 (517)
T PRK13355 457 ------------NIH----D-DEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYL---PRLEDLEDAMDRLADFFSY 514 (517)
T ss_pred ------------CCC----C-HHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeC---CCHHHHHHHHHHHHHHHHH
Confidence 000 0 0022334455666555444433 24679999963 5788999999888887754
No 200
>PRK07505 hypothetical protein; Provisional
Probab=99.48 E-value=5.4e-12 Score=117.53 Aligned_cols=225 Identities=11% Similarity=0.074 Sum_probs=125.3
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccc--cChhhh-hhhcC-CC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSAC--ICPEFR-HFIDG-VE 101 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~--~~~~~~-~~~~~-~~ 101 (310)
.|+++|++++++. +.++++..+.+.+|.+.|+++|.++|++||+++++|++|+.+.+ ...... ..... ..
T Consensus 167 ~d~~~l~~~~~~~------~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~ 240 (402)
T PRK07505 167 NDLDALEDICKTN------KTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLN 240 (402)
T ss_pred CCHHHHHHHHhcC------CCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCC
Confidence 3789999988653 23666667778889999999999999999999999999853221 111111 01111 12
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC-cchHHHHHHHHHhCH
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWFVLRNYGV 180 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~ 180 (310)
...+++.+..|.++.+ | |++.+.+++..........+|.+ .++.. ....++.++++.+..
T Consensus 241 d~~i~~~s~sK~~~~~-G-g~~~~~~~~~~~~~~~~~~~~t~-----------------~~~~~~~a~aa~~a~l~~~~~ 301 (402)
T PRK07505 241 ERTIIAASLGKAFGAS-G-GVIMLGDAEQIELILRYAGPLAF-----------------SQSLNVAALGAILASAEIHLS 301 (402)
T ss_pred CCeEEEEechhhhhcc-C-eEEEeCCHHHHHHHHHhCCCcee-----------------CCCCCHHHHHHHHHHHHHHhc
Confidence 2345667899998765 2 55554555443222111112211 11111 122333444444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhc
Q 046506 181 ANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINAS 260 (310)
Q Consensus 181 ~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 260 (310)
+.+.++.++..++.+.+.+.+... .......+..+.+.. .....++.+.|.++
T Consensus 302 ~~~~~~~~~l~~~~~~~~~~~~~~-----~~g~~~~i~~~~~~~----------------------~~~~~~~~~~l~~~ 354 (402)
T PRK07505 302 EELDQLQQKLQNNIALFDSLIPTE-----QSGSFLPIRLIYIGD----------------------EDTAIKAAKQLLDR 354 (402)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHhc-----CCCCCCCEEEEEeCC----------------------HHHHHHHHHHHHHC
Confidence 444555555544444443332111 111222232232221 11224677888888
Q ss_pred CcEEEEEeEE---CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 261 GKAYMTHAVL---GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 261 g~~~~~~~~~---~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
|.+....... .+..+||++++ ..+|+||+++++++|++++.+
T Consensus 355 Gi~v~~~~~p~~~~~~~~lRi~~~-~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 355 GFYTSPVFFPVVAKGRAGLRIMFR-ASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred CCeEeeecCCCCCCCCceEEEecC-ccCCHHHHHHHHHHHHHHHHh
Confidence 8654332111 23468999966 578999999999999987643
No 201
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.48 E-value=1.7e-12 Score=117.70 Aligned_cols=209 Identities=14% Similarity=-0.000 Sum_probs=129.4
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGA 103 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 103 (310)
|++++++++.+ +.++++++++|++|.+.+ +++|+++|+++|+++++|.++...... ........ ...-
T Consensus 115 d~~~l~~~~~~-------~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~-~~~~~~~~-~~~~ 185 (330)
T TIGR01140 115 DLDRLPAALEE-------LDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPD-ASLAPQAA-RFPG 185 (330)
T ss_pred CHHHHHhhccc-------CCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCc-cchhhHhc-cCCC
Confidence 67888888732 226778889999999998 777889999999999999999655422 11111111 1124
Q ss_pred Ceeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCH-H
Q 046506 104 DSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGV-A 181 (310)
Q Consensus 104 D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~ 181 (310)
++++.|++|+++.| ..+|++++.++ .+.......+.+ ....+...++...+.. +
T Consensus 186 ~i~~~S~SK~~g~~G~R~G~i~~~~~-~~~~l~~~~~~~-----------------------~~s~~~q~~~~~~l~~~~ 241 (330)
T TIGR01140 186 LVVLRSLTKFFGLAGLRLGFVVAHPA-LLARLREALGPW-----------------------TVNGPARAAGRAALADTA 241 (330)
T ss_pred EEEEEecchhhcCchhhhhheeCCHH-HHHHHHhcCCCC-----------------------CchHHHHHHHHHHHhchH
Confidence 57889999999855 44688876543 443322211110 0012223333333333 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcC
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASG 261 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 261 (310)
..+...++..++.+.+.+.|++++.+++. ++....+.+.+.. ..++.+.|.++|
T Consensus 242 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~f~~~~~~~-------------------------~~~l~~~l~~~g 295 (330)
T TIGR01140 242 WQAATRARLAAERARLAALLARLGGLEVV-GGTALFLLVRTPD-------------------------AAALHEALARRG 295 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCeEEEEEcCC-------------------------HHHHHHHHHHCC
Confidence 34677788889999999999988666654 3344444443322 136778888876
Q ss_pred cEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHH
Q 046506 262 KAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQ 298 (310)
Q Consensus 262 ~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~ 298 (310)
.+...+..+. +.+++|+++. +..++ ++|+++|+
T Consensus 296 i~v~pg~~f~~~~~~~iRi~~~---~~~~~-~~~~~~l~ 330 (330)
T TIGR01140 296 ILIRDFDNFPGLDPRYLRFALP---TDEEN-DRLEEALA 330 (330)
T ss_pred EEEEECCCCCCCCCCEEEEEec---CHHHH-HHHHHhhC
Confidence 5444433332 3468999965 33456 88888763
No 202
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.48 E-value=6.6e-12 Score=116.02 Aligned_cols=246 Identities=13% Similarity=0.108 Sum_probs=145.0
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcc-ccc---CChHHHHHHHHHhCcEEEeecccccccc-cC----hhh
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAI-TAV---DTLKPLCDVAKQFGIWVHVDAAYAGSAC-IC----PEF 93 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~-G~~---~pl~~I~~l~~~~g~~l~vD~a~~~~~~-~~----~~~ 93 (310)
+|.+|+++|+++|++.+... +.+++++...+.. |.. .++++|.++|++||++||.|+||..+.. +. ..+
T Consensus 158 tgnlD~d~Le~~I~~~~~~~--~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y 235 (460)
T PRK13237 158 KGNVDLDKLQALIDEVGAEN--IAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGY 235 (460)
T ss_pred CCCcCHHHHHHHhccccCCc--cCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhccccccc
Confidence 56899999999998643211 2245555555555 544 3689999999999999999999976632 11 111
Q ss_pred hhh-----hcC-CCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcc
Q 046506 94 RHF-----IDG-VEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFR 167 (310)
Q Consensus 94 ~~~-----~~~-~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (310)
.+. ..+ ..++|.+++|+||.+.+|. .|++.++++++..+.....+.|-+. +.| .-..+|...
T Consensus 236 ~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~-GG~i~t~D~eL~~~~r~~~~~~eG~--------~ty---gg~~grd~~ 303 (460)
T PRK13237 236 QDKSIKEIVHEMFSYADGCTMSGKKDCLVNI-GGFLAMNDEELFDEAKELVVVYEGM--------PSY---GGMAGRDME 303 (460)
T ss_pred CCCcHhHHhhhccCcCcEEEEeCCCCCCCCC-ceEEEECCHHHHHHHHHhccccCCC--------cCC---CChhhhHHH
Confidence 111 111 2469999999999999876 5677788887665543332222111 001 001122222
Q ss_pred hHHHHHHHHHhCHHHH-HHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHH
Q 046506 168 SLKLWFVLRNYGVANL-RHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERI 246 (310)
Q Consensus 168 ~~~~~~~l~~~~~~~~-~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (310)
++ ...+. ++. ....++..+.+++|.+.|.+- |+.+..|.....+.+.......+ . |..
T Consensus 304 al--Avgl~----E~~~~~y~~~ri~~~~~l~~~L~~~-Gvpv~~p~ggH~v~vda~~~lph-----~-----~~~---- 362 (460)
T PRK13237 304 AM--AIGIE----ESVQYEYIEHRVGQVRYLGEKLLAA-GVPIVEPVGGHAVFLDARRFLPH-----L-----PQD---- 362 (460)
T ss_pred HH--HhHHH----hhchHHHHHHHHHHHHHHHHHHHHC-CCceecCCCceEEEEEhHHhCCC-----C-----Ccc----
Confidence 22 12222 222 266777778899999999875 99998766665554443321000 0 011
Q ss_pred HHHHHHHHHHHHh-cCcEEEE-EeE-----EC-------CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 247 NEFNRELLESINA-SGKAYMT-HAV-----LG-------GIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 247 ~~~~~~l~~~l~~-~g~~~~~-~~~-----~~-------~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+--.+.+.-.|.. .|+-.+. ++. .+ ....+|+.+..---|.+++|.+.+++.++.++
T Consensus 363 ~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 363 QFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred cChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 0111344444443 3332221 111 11 13689999886667889999999999998865
No 203
>PLN02656 tyrosine transaminase
Probab=99.48 E-value=5.2e-12 Score=117.88 Aligned_cols=254 Identities=11% Similarity=0.047 Sum_probs=147.3
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccC---ChHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVD---TLKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~---pl~~I~~l~~~~g~~l~v 79 (310)
+...|+. ++.+|+++.+.+.+|+++|++++++. +..+++++++|.+|.+. ++++|+++|++||+++++
T Consensus 137 ~~~~g~~---~~~i~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~ 207 (409)
T PLN02656 137 AAFRHLE---VRYVDLLPEKGWEVDLDAVEALADQN------TVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIA 207 (409)
T ss_pred HHHcCCE---EEEEeCCCcCCCCCCHHHHHHHhccC------ceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 3456776 89999865334689999999988654 34788888999999984 588999999999999999
Q ss_pred ecccccccccChhhhhh--hcCCCCCCeeeeecccccccc-cceEEEEEeC-------chhHHhhhccCCcccccccccc
Q 046506 80 DAAYAGSACICPEFRHF--IDGVEGADSFSLNAHKWFFTT-LDCCCLWVKD-------PSDLVNSLSTNPEYLKNKATES 149 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~--~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~-------~~~~~~~~~~~~~y~~~~~~~~ 149 (310)
|.+++............ .... .-=++..|+.|.++.| .-+|+++..+ +..+....... .....
T Consensus 208 De~y~~~~~~~~~~~~~~~~~~~-~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~----- 280 (409)
T PLN02656 208 DEVYGHLAFGSNPFVPMGVFGSI-VPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKKYF-DILGG----- 280 (409)
T ss_pred ehhhhhcccCCCCcccHHHhccc-CcEEEEcccchhccCcceeEEEEEEeCcccccccHHHHHHHHHHH-hhhcC-----
Confidence 99987443322111110 0110 0124568899986655 5577777643 22222211000 00000
Q ss_pred ccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCc-eEEEEEEcCCcch
Q 046506 150 KQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHF-AVVCFRVSPSAVM 228 (310)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~-~~v~~~~~~~~~~ 228 (310)
........+..+++......+++..++..+..+.+.+.|.+++++....+|.. ..+.+.+.....
T Consensus 281 -------------~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~~~~- 346 (409)
T PLN02656 281 -------------PATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNLSLL- 346 (409)
T ss_pred -------------CCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecchhhc-
Confidence 00011222222332212345677777888888889999988765543224444 344444431100
Q ss_pred hhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 229 DKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.+. ......+...+.+.|.....+...+..+++|+++.. ++++++..++.|++.+.+.
T Consensus 347 ------------~~~---~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~---~~e~l~eal~rl~~~~~~~ 404 (409)
T PLN02656 347 ------------EDI---SDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAA---DPSSLEEALGRIKSFYLRH 404 (409)
T ss_pred ------------CCC---CCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCC---CHHHHHHHHHHHHHHHHHh
Confidence 000 000012334455666655544444556799999763 5788888888888876543
No 204
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.47 E-value=9.5e-12 Score=116.12 Aligned_cols=255 Identities=11% Similarity=0.066 Sum_probs=147.8
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
+...|+. ++.++.++.+++.+|+++|++++.+. +..+++..++|++|.+.+ +++|+++|++||+++++
T Consensus 138 ~~~~g~~---~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~ 208 (409)
T PLN00143 138 AIFHHLE---IRHFDLLPEKGWEVDLDAVEAIADEN------TIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIA 208 (409)
T ss_pred HHHcCCE---EEEEeccCCCCCcCCHHHHHHhcccC------CEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEE
Confidence 3456666 88888864335689999999988654 346777788999999987 77888999999999999
Q ss_pred ecccccccccChhhhhhhcCCCCC--Ceeeeecccccccc-cceEEEEEeCchhHHh------hhccCCccccccccccc
Q 046506 80 DAAYAGSACICPEFRHFIDGVEGA--DSFSLNAHKWFFTT-LDCCCLWVKDPSDLVN------SLSTNPEYLKNKATESK 150 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~~~--D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~------~~~~~~~y~~~~~~~~~ 150 (310)
|.++.........+.. ...+... =++..|..|.++.| .-+|+++..++..+.+ .+.. .... .
T Consensus 209 De~Y~~l~~~~~~~~~-~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~---~~~~-~---- 279 (409)
T PLN00143 209 DEVYGHIVFGSKPFVP-MGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKK---ALNP-A---- 279 (409)
T ss_pred EccccccccCCCCCcc-hhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHHHHHHHH---HHhc-c----
Confidence 9998654332111110 0111111 14668999996655 5577777644321111 1100 0000 0
Q ss_pred cccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC-ceEEEEEEcCCcchh
Q 046506 151 QVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH-FAVVCFRVSPSAVMD 229 (310)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~-~~~v~~~~~~~~~~~ 229 (310)
..+-.....++..++.....+.+++..++..+..+.+.+.|.++++......|. +..+.+++.....
T Consensus 280 ----------~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~~~~-- 347 (409)
T PLN00143 280 ----------PFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLLLL-- 347 (409)
T ss_pred ----------CCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecchhhc--
Confidence 000001111122222211234677888888888888999998875543333443 4455555542100
Q ss_pred hhhhhhccccchhHHHHHHHHHHHHHHH-HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 230 KLKTKYENSLLSEEERINEFNRELLESI-NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
+ . +. ...++...+ .+.|.....+......+++|+++. +++++++..++.|++.+....
T Consensus 348 ----------~-~---~~-~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~---~~~~~l~~al~rl~~~l~~~~ 406 (409)
T PLN00143 348 ----------E-D---IE-DDMEFCLKLAKEESLIILPGVTVGLKNWLRITFA---VEQSSLEDGLGRLKSFCGRHA 406 (409)
T ss_pred ----------C-C---CC-CHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEc---CCHHHHHHHHHHHHHHHHHhc
Confidence 0 0 00 012333333 456655554444455689999966 358899999999988876543
No 205
>PRK09082 methionine aminotransferase; Validated
Probab=99.47 E-value=7.4e-13 Score=122.67 Aligned_cols=241 Identities=11% Similarity=0.044 Sum_probs=142.8
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCccccc---CChHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAV---DTLKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~---~pl~~I~~l~~~~g~~l~v 79 (310)
++.+|.. ++.+|.++. ++.+|++++++++++. +.++++++.+|++|.+ .++++|.++|++||+++++
T Consensus 132 ~~~~g~~---~~~~~~~~~-~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~ 201 (386)
T PRK09082 132 IELAGGR---AVRVALQPP-DFRVDWQRFAAAISPR------TRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLS 201 (386)
T ss_pred HHHcCCE---EEEEecCcc-cccCCHHHHHHhcCcc------ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEE
Confidence 4556766 999999754 4789999999999654 3477777888999986 5688899999999999999
Q ss_pred ecccccccccChhhhhhh--cCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 80 DAAYAGSACICPEFRHFI--DGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~--~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
|.+++............. .+...-.++..|+.|.++.| .-+|+++. +++.+....... .+....
T Consensus 202 De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~-~~~l~~~~~~~~-~~~~~~----------- 268 (386)
T PRK09082 202 DEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVA-PAALSAEFRKVH-QYNTFT----------- 268 (386)
T ss_pred ehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhC-CHHHHHHHHHHH-hhhcCC-----------
Confidence 999864433211111111 11112346778999998755 23566654 444432221110 010000
Q ss_pred CceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceE-EEEEEcC-Ccchhhhhhh
Q 046506 157 DWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAV-VCFRVSP-SAVMDKLKTK 234 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~-v~~~~~~-~~~~~~~~~~ 234 (310)
.+ ......+...++. ..+.+++..+...++.+.+.+.|++. ++++. ++..+. +.+.++. .+.
T Consensus 269 -----~~-~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~~~g~~~~~~~~~~~~~~------- 332 (386)
T PRK09082 269 -----VN-TPAQLALADYLRA-EPEHYLELPAFYQAKRDRFRAALANS-RFKLL-PCEGTYFQLVDYSAISDL------- 332 (386)
T ss_pred -----CC-hHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCCeeEEEEEeccccCCC-------
Confidence 00 0111111222211 34456667777788888899999874 77765 444443 4445542 110
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeE-E----CCEeEEEEEccCCCCCHHHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESINASGKAYMTHAV-L----GGIYAIRFAAGATLTEERHVMVAWTVVQE 299 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~----~~~~~iRis~~~~~~t~edi~~li~~l~~ 299 (310)
-..++.+.+.++.++.+.+.. + .+.+++|+++.+ ++++++..++.|++
T Consensus 333 --------------~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~---~~~~l~~~~~rl~~ 385 (386)
T PRK09082 333 --------------DDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK---QEETLDAAAERLCQ 385 (386)
T ss_pred --------------CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC---CHHHHHHHHHHHhh
Confidence 013566665444344444432 2 124789999663 58888888888764
No 206
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.47 E-value=2.9e-12 Score=118.69 Aligned_cols=240 Identities=13% Similarity=0.061 Sum_probs=140.4
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|+. ++.+|.+++..+.+|++++++.+.+. +.++++++++|++|.+.+ +++|+++|++||+++++
T Consensus 134 ~~~~g~~---~~~v~~~~~~g~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~ 204 (385)
T PRK09276 134 TIFAGGE---PYFMPLKEENGFLPDLDAIPEDVAKK------AKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCH 204 (385)
T ss_pred HHHcCCE---EEEEecCCCCCCcCCHHHHHHhcccc------ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Confidence 4456776 88999875434678999999988653 347777788999999988 57899999999999999
Q ss_pred ecccccccccChhhhhh--hcCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCC
Q 046506 80 DAAYAGSACICPEFRHF--IDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDY 155 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~--~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 155 (310)
|.++............. ........++..|..|.++.| | +|+++. ++..+....... ......
T Consensus 205 De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~-GlRiG~~i~-~~~l~~~~~~~~-~~~~~~---------- 271 (385)
T PRK09276 205 DAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMT-GWRIGFAVG-NADLIAGLGKVK-SNVDSG---------- 271 (385)
T ss_pred ecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCc-chhheeeeC-CHHHHHHHHHHH-hhccCC----------
Confidence 99997543321111110 011112345678899998654 4 677764 454433221111 011000
Q ss_pred CCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceE-EEEEEcCCcchhhhhhh
Q 046506 156 KDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAV-VCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~-v~~~~~~~~~~~~~~~~ 234 (310)
........+..+++ .....+++..++..++.+.+.+.|++. ++++. ++..+. +.+.+++. .
T Consensus 272 -------~~~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~v~~~~~-~------- 333 (385)
T PRK09276 272 -------VFQAIQEAGIAALN-GPQEVVEELRKIYQERRDILVEGLRKL-GLEVE-PPKATFYVWAPVPKG-Y------- 333 (385)
T ss_pred -------CCHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCCcceEEEEECCCC-C-------
Confidence 00011111222222 123456777778888889999999886 77765 344443 44444331 0
Q ss_pred hccccchhHHHHHHHHHHHHHHHHh-cCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESINA-SGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQE 299 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~ 299 (310)
+ ..++.+.+.+ .|.....+.... +.+++|+++. .+++++...++.|.+
T Consensus 334 -------~-------~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~---~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 334 -------T-------SAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALT---VPDERIEEAVERIKK 384 (385)
T ss_pred -------C-------HHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeC---CCHHHHHHHHHHHhh
Confidence 0 1356666654 454433332222 2468999965 356677777666643
No 207
>PLN00175 aminotransferase family protein; Provisional
Probab=99.47 E-value=3.5e-12 Score=119.19 Aligned_cols=244 Identities=15% Similarity=0.130 Sum_probs=148.1
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|.. ++.+|.++. ++.+|+++|++++.+. +.++++.+++|++|.+.+ +++|+++|++||+++++
T Consensus 156 ~~~~g~~---~~~v~~~~~-~~~~~~~~l~~~~~~~------~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~ 225 (413)
T PLN00175 156 LSMAGAK---IKTVTLRPP-DFAVPEDELKAAFTSK------TRAILINTPHNPTGKMFTREELELIASLCKENDVLAFT 225 (413)
T ss_pred HHHcCCE---EEEEECCcc-cCCCCHHHHHHhcCcC------ceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEE
Confidence 4456776 999999864 3689999999999664 347778889999999865 77899999999999999
Q ss_pred ecccccccccChhhhhh--hcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 80 DAAYAGSACICPEFRHF--IDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~--~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
|.++....+..+ +... ..+...-.++..|..|.++.| .-+|+++. ++..+....... .+....
T Consensus 226 De~Y~~l~~~~~-~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~-~~~l~~~l~~~~-~~~~~~----------- 291 (413)
T PLN00175 226 DEVYDKLAFEGD-HISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIA-PPHLTWGVRQAH-SFLTFA----------- 291 (413)
T ss_pred ecccCccccCCc-ccChhhCCCCcCcEEEEecchhhccCcchheeeeEe-CHHHHHHHHHHH-hhccCC-----------
Confidence 999865543211 1111 111111235668999999855 34666654 443433221110 111000
Q ss_pred CceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCce-EEEEEEcCCcchhhhhhhh
Q 046506 157 DWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFA-VVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~-~v~~~~~~~~~~~~~~~~~ 235 (310)
.+ .+....+..+++ .+...+++..++..+..+.+.+.|.+. ++.+. +|..+ .+.+.+.+.+.
T Consensus 292 -----~s-~~~Q~a~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~p~g~~f~~~~~~~~~~-------- 354 (413)
T PLN00175 292 -----TA-TPMQWAAVAALR-APESYYEELKRDYSAKKDILVEGLKEV-GFKVY-PSSGTYFVMVDHTPFGF-------- 354 (413)
T ss_pred -----CC-HHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeec-CCCeeEEEEEeccccCC--------
Confidence 00 011122222232 133456777888888999999999886 77765 44444 34444432110
Q ss_pred ccccchhHHHHHHHHHHHHHHHHh-cCcEEEEEeEE-----CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINA-SGKAYMTHAVL-----GGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~-----~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
+ ...++.+.+.+ .|....++... .+...+|+++. .++++++..++.|++.++
T Consensus 355 ------~------~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~---~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 355 ------E------NDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFC---KDEETLRAAVERMKTKLK 412 (413)
T ss_pred ------C------CHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEc---CCHHHHHHHHHHHHHHHh
Confidence 0 01356666654 46554444322 13468999966 368899999998887653
No 208
>PRK08960 hypothetical protein; Provisional
Probab=99.47 E-value=4.6e-12 Score=117.44 Aligned_cols=242 Identities=13% Similarity=0.043 Sum_probs=135.1
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD 80 (310)
..+|.. ++.+|+++++.+.+|++++++++++.+ .++++.+++|++|.+.+ +++|+++|++||+++++|
T Consensus 134 ~~~g~~---~~~v~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~D 204 (387)
T PRK08960 134 RLVEGA---AQLVPVGPDSRYQLTPALVERHWNADT------VGALVASPANPTGTLLSRDELAALSQALRARGGHLVVD 204 (387)
T ss_pred HhcCCe---EEEEecCcccCCCCCHHHHHHHhCccc------eEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEE
Confidence 445665 889999875567899999999887643 36778889999999887 556777899999999999
Q ss_pred cccccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCce
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 159 (310)
.++.......+ ... ......--++..|.+|.++.| .-+|+++.. +..+.........+...
T Consensus 205 e~Y~~~~~~~~-~~~-~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~-~~~~~~~~~~~~~~~~~--------------- 266 (387)
T PRK08960 205 EIYHGLTYGVD-AAS-VLEVDDDAFVLNSFSKYFGMTGWRLGWLVAP-PAAVPELEKLAQNLYIS--------------- 266 (387)
T ss_pred ccccccccCCC-CCC-hhhccCCEEEEeecccccCCcccEEEEEEcC-HHHHHHHHHHHhhhccC---------------
Confidence 99864332111 111 111111124668999998744 227887764 33432221110000000
Q ss_pred eccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCc-eEEEEEEcCCcchhhhhhhhccc
Q 046506 160 ITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHF-AVVCFRVSPSAVMDKLKTKYENS 238 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~ 238 (310)
.+ .+....+..++.......+.+..+...+..+.+.+.|++. ++.+...|.. ..+.+.+.....
T Consensus 267 --~s-~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~p~g~~f~~~~~~~~~~----------- 331 (387)
T PRK08960 267 --AS-TPAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL-GFGIAVEPQGAFYLYADISAFGG----------- 331 (387)
T ss_pred --CC-HHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCcCCcCCCeeEEEEEeccccCC-----------
Confidence 00 0111112222221112345566667777788888898876 6654323443 333444432100
Q ss_pred cchhHHHHHHHHHHHHHHHHh-cCcEEEEEeEEC---CEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 239 LLSEEERINEFNRELLESINA-SGKAYMTHAVLG---GIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~---~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
+ ..++.+.+.+ .|....++.... ...++|+++.. +.+.+...++.|++.
T Consensus 332 ---~-------~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~---~~~~l~~al~~l~~~ 384 (387)
T PRK08960 332 ---D-------AFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ---SLPRLQEAVERIARG 384 (387)
T ss_pred ---C-------HHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC---CHHHHHHHHHHHHHH
Confidence 0 1355666554 554433332222 24689999663 455555555555443
No 209
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.47 E-value=2.3e-11 Score=114.55 Aligned_cols=253 Identities=13% Similarity=0.105 Sum_probs=150.1
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEeecc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD~a 82 (310)
.|+. ++.|++++.+++.+|++++++++.+..+.+.++.+++++.++|++|.+.+ +++|.++|++||+++++|.+
T Consensus 165 ~g~~---vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEi 241 (447)
T PLN02607 165 TGVK---IVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEI 241 (447)
T ss_pred CCcE---EEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEecc
Confidence 4555 88888876555679999999999886665656678888999999999877 77899999999999999999
Q ss_pred cccccccCh---hhhhhhcCCC--C-CC--eeeeecccccccc-cceEEEEEeCchhHHhhhccCCcccccccccccccc
Q 046506 83 YAGSACICP---EFRHFIDGVE--G-AD--SFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVV 153 (310)
Q Consensus 83 ~~~~~~~~~---~~~~~~~~~~--~-~D--~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~ 153 (310)
++...+..+ .......... + .+ .+..+..|.|+.| .-+|+++..++... ..+.....|...
T Consensus 242 Ya~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~-~~~~~~~~~~~~--------- 311 (447)
T PLN02607 242 YSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVV-TTARRMSSFTLV--------- 311 (447)
T ss_pred ccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHH-HHHHHHhhcCCC---------
Confidence 875433211 1111111110 0 11 3557999998744 55787776555432 222111111100
Q ss_pred CCCCceeccCCCcchHHHHHHHHHhCH-----HHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcch
Q 046506 154 DYKDWQITLSRRFRSLKLWFVLRNYGV-----ANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVM 228 (310)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~ 228 (310)
......++...+.. .-+....++..+..+.+.+.|++. +++...+.....+.+.+....
T Consensus 312 -------------s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~~~~ag~fvw~~L~~~~-- 375 (447)
T PLN02607 312 -------------SSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECLKGNAGLFCWMNLSPLL-- 375 (447)
T ss_pred -------------CHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcccCCeeEEEEEEchHhh--
Confidence 00111111222222 123445566667777888888875 776553323444555553210
Q ss_pred hhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEe-EEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 229 DKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHA-VLG--GIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
. .. . .....++.+++.++.++.+.|+ ... ..+++|+++++ .++++++..++.|.+.+.+
T Consensus 376 ---~--------~~--~-~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~--~~~~~l~~gl~Ri~~~l~~ 437 (447)
T PLN02607 376 ---E--------TP--T-REGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFAN--MSEDTLEVALKRIHRFMDR 437 (447)
T ss_pred ---c--------CC--C-chhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEecc--CCHHHHHHHHHHHHHHHHH
Confidence 0 00 0 0111355666655433444443 332 36899999774 4688999999999888854
No 210
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.47 E-value=7.1e-12 Score=116.43 Aligned_cols=241 Identities=12% Similarity=0.046 Sum_probs=140.5
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHH------h
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQ------F 73 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~------~ 73 (310)
++..|+. ++++|++++ ++.+|+++|++++++. +.++++++.+|++|.+.| +++|+++|++ |
T Consensus 137 ~~~~g~~---v~~v~~~~~-~~~~d~~~l~~~~~~~------~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~ 206 (394)
T PRK06836 137 VDNHGGK---LVVVPTDTD-TFQPDLDALEAAITPK------TKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGR 206 (394)
T ss_pred HHHcCCE---EEEEecCCc-cCcCCHHHHHhhcCcC------ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCC
Confidence 3456776 999999875 3679999999999664 347788889999999877 6677888999 8
Q ss_pred CcEEEeecccccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchh----HHhhhccCCccccccccc
Q 046506 74 GIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSD----LVNSLSTNPEYLKNKATE 148 (310)
Q Consensus 74 g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~----~~~~~~~~~~y~~~~~~~ 148 (310)
|+++++|.++................. .-..+..|..|.++.| ..+|+++..+... +...+..........
T Consensus 207 ~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 282 (394)
T PRK06836 207 PIYLISDEPYREIVYDGAEVPYIFKYY-DNSIVVYSFSKSLSLPGERIGYIAVNPEMEDADDLVAALVFANRILGFV--- 282 (394)
T ss_pred CeEEEEeccccccccCCCCCCChHHcc-CcEEEEecchhhccCcceeeEEEecCHHHhhhHHHHHHHHHHhhccccc---
Confidence 999999999864432111111111111 1346778999998855 4578877654311 001100000000000
Q ss_pred cccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCce-EEEEEEcCCcc
Q 046506 149 SKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFA-VVCFRVSPSAV 227 (310)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~-~v~~~~~~~~~ 227 (310)
....+...+....+.. .. ..++..+..+.+.+.|+++ |+++. ++..+ .++..++..+
T Consensus 283 ----------------~~~~~~q~~~~~~l~~-~~--~~~~~~~~r~~l~~~L~~~-g~~~~-~~~gg~~~~~~~~~~~- 340 (394)
T PRK06836 283 ----------------NAPALMQRVVAKCLDA-TV--DVSIYKRNRDLLYDGLTEL-GFECV-KPQGAFYLFPKSPEED- 340 (394)
T ss_pred ----------------cCCHHHHHHHHHHhCC-hH--HHHHHHHHHHHHHHHHHhC-CCEee-cCCceEEEEEeCCCCC-
Confidence 0011111122222221 11 1334445667778888776 77765 34434 3333332211
Q ss_pred hhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 228 MDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
..++.+.+.+.|.....+..+...+++|++++ .++++++..++.|++++++.
T Consensus 341 ----------------------~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~---~~~~~~~~~i~~l~~~l~~~ 392 (394)
T PRK06836 341 ----------------------DVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYC---VDTETIERSLPAFEKLAKEY 392 (394)
T ss_pred ----------------------HHHHHHHHHhCCEEEECchhcCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHh
Confidence 13455666666654444333334578999965 36899999999999887653
No 211
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.46 E-value=4.9e-12 Score=116.92 Aligned_cols=233 Identities=13% Similarity=0.060 Sum_probs=145.1
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHH-HHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeec
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKIN-SDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~-~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
++..|+. ++.+|.++ ++.+|+++|++++. +. +.+++++.++|++|.+.|.+++.++++.. +++++|.
T Consensus 144 ~~~~g~~---~~~v~~~~--~~~~d~~~l~~~~~~~~------~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~De 211 (380)
T PLN03026 144 AAVNGAE---VIKVPRTP--DFSLDVPRIVEAVETHK------PKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDE 211 (380)
T ss_pred HHHcCCE---EEEeecCC--CCCcCHHHHHHHHhccC------CcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEEC
Confidence 3456776 88898864 36899999999983 33 44788888999999999999999999865 9999999
Q ss_pred ccccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 82 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
++.-+..... ....... ..-.++..|+.|.++.| ..+|+++. ++..+........+|.
T Consensus 212 aY~~~~~~~~-~~~~~~~-~~~viv~~SfSK~~glaGlRiGy~~~-~~~~i~~l~~~~~~~~------------------ 270 (380)
T PLN03026 212 AYIEFSTQES-RMKWVKK-YDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPYN------------------ 270 (380)
T ss_pred cchhhcCCcc-hHHHHHh-CCCEEEEecchHhhcCccccceeeec-CHHHHHHHHHhcCCCC------------------
Confidence 9854322111 1111111 11246778999998744 34566654 4444433221111110
Q ss_pred ccCCCcchHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhcccc
Q 046506 161 TLSRRFRSLKLWFVLRNY-GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSL 239 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 239 (310)
...+...++...+ ..+.+++..++..+..+++.+.|++++++.+ .++.++.+.+.+.+..
T Consensus 271 -----~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~~------------- 331 (380)
T PLN03026 271 -----VSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFLEP-YPSDANFILCRVTSGR------------- 331 (380)
T ss_pred -----CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCeE-CCCCCeEEEEECCCCC-------------
Confidence 0112222222223 2244567777778888889999988865655 3566777777655310
Q ss_pred chhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 240 LSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 240 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
+ ..++.+.|.+.|............+++|+|+. +++++++++++|+++
T Consensus 332 --~-------~~~~~~~l~~~gI~v~~~~~~~~~~~lRis~~----~~~~~~~l~~al~~~ 379 (380)
T PLN03026 332 --D-------AKKLKEDLAKMGVMVRHYNSKELKGYIRVSVG----KPEHTDALMEALKQL 379 (380)
T ss_pred --C-------HHHHHHHHHHCCeEEEECCCCCCCCEEEEecC----CHHHHHHHHHHHHHh
Confidence 0 13566777777754332222233568999954 577999999999764
No 212
>PRK08068 transaminase; Reviewed
Probab=99.46 E-value=6.9e-12 Score=116.34 Aligned_cols=241 Identities=10% Similarity=0.010 Sum_probs=140.5
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCCh---HHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTL---KPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl---~~I~~l~~~~g~~l~v 79 (310)
++.+|+. ++.+|+++++.+.+|++++++.+.+. +.++++..++|++|.+.+. ++|+++|++||+++++
T Consensus 135 ~~~~g~~---~~~i~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~ 205 (389)
T PRK08068 135 VALARAQ---FETMPLIAENNFLPDYTKIPEEVAEK------AKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVH 205 (389)
T ss_pred HHhcCCE---EEEeecccccCCCCCHHHHHHhcccc------ceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEE
Confidence 4567777 99999986434678999999998653 3467777788999999885 5788899999999999
Q ss_pred ecccccccccChhhhhhhcCC--CCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 80 DAAYAGSACICPEFRHFIDGV--EGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~--~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
|.+++................ ..-.++..|..|.++.| .-+|+++ .++..+.........+.....
T Consensus 206 Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~-~~~~l~~~l~~~~~~~~~~~~---------- 274 (389)
T PRK08068 206 DFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAV-GNESVIEAINLLQDHLFVSLF---------- 274 (389)
T ss_pred ehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEe-cCHHHHHHHHHHHhhccCCCC----------
Confidence 999864332110000111111 11236778999999654 3367765 455443322111111110000
Q ss_pred CceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceE-EEEEEcCCcchhhhhhhh
Q 046506 157 DWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAV-VCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~-v~~~~~~~~~~~~~~~~~ 235 (310)
......+..++. -+.+.++...++..+..+.+.+.|.+. ++.+. ++..+. +.+.+.+..
T Consensus 275 --------~~~q~~~~~~l~-~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-~~~g~~~~~v~~~~~~--------- 334 (389)
T PRK08068 275 --------GAIQDAAIEALL-SDQSCVAELVARYESRRNAFISACREI-GWEVD-APKGSFFAWMPVPKGY--------- 334 (389)
T ss_pred --------hHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CCCeeEEEEEECCCCC---------
Confidence 001111112221 133556777888888888999999886 77654 445544 445554310
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeE-E--CCEeEEEEEccCCCCCHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKAYMTHAV-L--GGIYAIRFAAGATLTEERHVMVAWTVVQE 299 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~--~~~~~iRis~~~~~~t~edi~~li~~l~~ 299 (310)
-..++.+.+.++.++.+.+.. . .+.+++|+++. ++++.+...++.|++
T Consensus 335 -------------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~al~~l~~ 385 (389)
T PRK08068 335 -------------TSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLL---TDEERLREAVERIGK 385 (389)
T ss_pred -------------CHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEc---CCHHHHHHHHHHHHH
Confidence 014567777654334444432 2 23579999975 345556555555543
No 213
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.46 E-value=5.1e-12 Score=117.72 Aligned_cols=249 Identities=12% Similarity=0.063 Sum_probs=140.4
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHh-CcEEEeecccccccc
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQF-GIWVHVDAAYAGSAC 88 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~-g~~l~vD~a~~~~~~ 88 (310)
++.+++++++++.+|+++|++++.+. +.++++++.+|.+|.+.+ +++|+++|++| |+++++|.+++...+
T Consensus 141 ~~~v~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~ 214 (402)
T PRK06107 141 PVIVACPEEQGFKLTPEALEAAITPR------TRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRF 214 (402)
T ss_pred EEEecCCcccCCCCCHHHHHhhcCcC------ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhcccccc
Confidence 66777764334679999999988653 447778888999998876 56778889998 999999999864322
Q ss_pred cC---hhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCC
Q 046506 89 IC---PEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSR 164 (310)
Q Consensus 89 ~~---~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 164 (310)
.. +.......+...--++..|.+|.++.| .-+|+++. ++..+. .+.....+....
T Consensus 215 ~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~-~~~~~~-~~~~~~~~~~~~------------------- 273 (402)
T PRK06107 215 DDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAG-PADLIA-AINKLQSQSSSC------------------- 273 (402)
T ss_pred CCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeec-CHHHHH-HHHHHHHhcccC-------------------
Confidence 11 111111111111224456779999755 33577654 444432 221100111000
Q ss_pred CcchHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceE-EEEEEcCCcchhhhhhhhccccch
Q 046506 165 RFRSLKLWFVLRNY--GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAV-VCFRVSPSAVMDKLKTKYENSLLS 241 (310)
Q Consensus 165 ~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
...+...++...+ +...+++..++..++.+.+.+.|.+++++.+. +|..+. +.+++... .++ ..-++...
T Consensus 274 -~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~-~p~gg~~~~~~~~~~--~~~---~~~~~~~~ 346 (402)
T PRK06107 274 -PSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGLSCL-VPDGAFYLYVNCAGL--IGK---TTPEGKVL 346 (402)
T ss_pred -CChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCCccc-CCCcceEEeeecccc--ccc---ccccccCC
Confidence 1112222223333 33456677777788888899999887787765 444443 33333210 000 00000000
Q ss_pred hHHHHHHHHHHHHHHHH-hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 242 EEERINEFNRELLESIN-ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 242 ~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
....++...+. +.|.....+...+..+++|+++.. ++|+++..++.|++.+.++
T Consensus 347 ------~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~---~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 347 ------ETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIAT---SLETLEEACARIERAVAAL 401 (402)
T ss_pred ------CCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC---CHHHHHHHHHHHHHHHHhc
Confidence 00124444444 456544444444445799999763 5889999999998877654
No 214
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.46 E-value=2.3e-12 Score=118.39 Aligned_cols=247 Identities=13% Similarity=0.089 Sum_probs=143.0
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
....|.. +++++++++ ++.||+++++++|++.++ .|+++|. .|...++++|.++|+++|++|+-|+|
T Consensus 82 i~~~G~~---pv~~Di~~~-~~~id~~~~~~~i~~~t~------ai~~~h~---~G~~~d~~~i~~~~~~~~i~lIeD~a 148 (363)
T PF01041_consen 82 ILWAGAE---PVFVDIDPE-TLNIDPEALEKAITPKTK------AILVVHL---FGNPADMDAIRAIARKHGIPLIEDAA 148 (363)
T ss_dssp HHHTT-E---EEEE-BETT-TSSB-HHHHHHHHHTTEE------EEEEE-G---GGB---HHHHHHHHHHTT-EEEEE-T
T ss_pred HHHhccE---EEEEeccCC-cCCcCHHHHHHHhccCcc------EEEEecC---CCCcccHHHHHHHHHHcCCcEEEccc
Confidence 3456776 999999985 689999999999998753 5665554 67778999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeee--cccccccccceEEEEEeCchhHHhhhccC-CccccccccccccccCCCCce
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLN--AHKWFFTTLDCCCLWVKDPSDLVNSLSTN-PEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~--~hK~l~~p~g~g~l~v~~~~~~~~~~~~~-~~y~~~~~~~~~~~~~~~~~~ 159 (310)
|+.|...... ..+- ..|+-++| ..|.+.+. ..|++++++++...+..... .+..... ...+.
T Consensus 149 ~a~g~~~~g~----~~G~-~gd~~~fSf~~~K~i~~g-eGG~v~~~~~~~~~~~~~~~~~g~~~~~---------~~~~~ 213 (363)
T PF01041_consen 149 QAFGARYKGR----PVGS-FGDIAIFSFHPTKIITTG-EGGAVVTNDPELAERARALRNHGRSRDA---------FRRYR 213 (363)
T ss_dssp TTTT-EETTE----ETTS-SSSEEEEESSTTSSS-SS-S-EEEEESTHHHHHHHHHHTBTTEETSE---------CSTTE
T ss_pred cccCceeCCE----eccC-CCCceEecCCCCCCCcCC-CCeeEEecHHHHHHHhhhhhccCcCccc---------ccccc
Confidence 9877643221 1121 23555555 55888433 45777788776543332111 0000000 00001
Q ss_pred ec--cCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC-C-----ceEEEEEEcCCcchhhh
Q 046506 160 IT--LSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR-H-----FAVVCFRVSPSAVMDKL 231 (310)
Q Consensus 160 ~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-~-----~~~v~~~~~~~~~~~~~ 231 (310)
.+ .|..++.-.+.+++.......++++.++..++++.+.+.|.+++++.....+ . ...+.+.+.+...
T Consensus 214 ~~~~~g~n~rm~~~~AAigl~QL~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~---- 289 (363)
T PF01041_consen 214 HELPPGYNFRMSELQAAIGLAQLKRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEAL---- 289 (363)
T ss_dssp ESSSS--B-B-BHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGC----
T ss_pred ccccCCcccccHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccccccc----
Confidence 11 1222333333444444445678889999999999999999999998776432 2 1234455554210
Q ss_pred hhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEe---------------EEC---------CEeEEEEEccCCCCCH
Q 046506 232 KTKYENSLLSEEERINEFNRELLESINASGKAYMTHA---------------VLG---------GIYAIRFAAGATLTEE 287 (310)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~---------------~~~---------~~~~iRis~~~~~~t~ 287 (310)
....++.+.|.++|....... ... ....|-+- .++..++
T Consensus 290 ----------------~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP-~~~~lt~ 352 (363)
T PF01041_consen 290 ----------------ADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLP-IHPRLTE 352 (363)
T ss_dssp ----------------STHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEE-HSTTSCH
T ss_pred ----------------chHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECc-CCCCCCH
Confidence 012467778888875322211 000 02466666 4578999
Q ss_pred HHHHHHHHHHH
Q 046506 288 RHVMVAWTVVQ 298 (310)
Q Consensus 288 edi~~li~~l~ 298 (310)
+|+++++++|+
T Consensus 353 edv~~I~~~ir 363 (363)
T PF01041_consen 353 EDVDYIAEAIR 363 (363)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHhhccC
Confidence 99999999885
No 215
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.45 E-value=5.2e-12 Score=117.61 Aligned_cols=196 Identities=15% Similarity=0.138 Sum_probs=121.3
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
.+|+. ++++.. .+|+++++++|+++| .+|++.+.+|+++.+.|+++|+++|+++|+++++|.+++
T Consensus 123 ~~Gi~---v~~vd~------~~d~~~l~~~I~~~T------k~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~ 187 (432)
T PRK06702 123 KLGID---VTFFNP------NLTADEIVALANDKT------KLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLA 187 (432)
T ss_pred HCCCE---EEEECC------CCCHHHHHHhCCcCC------eEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCC
Confidence 34665 666632 478999999998864 377788899999999999999999999999999999986
Q ss_pred cccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCch--hHH----hhhccCCccccccccccccccC---
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPS--DLV----NSLSTNPEYLKNKATESKQVVD--- 154 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~--~~~----~~~~~~~~y~~~~~~~~~~~~~--- 154 (310)
.+.+.-+. . .++|+++.|.+|++++. .+.|.+.+.... +.. ......+.+.........+...
T Consensus 188 tP~~~~pl-~------~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 260 (432)
T PRK06702 188 TPYLCQAF-E------HGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIV 260 (432)
T ss_pred chhhCChh-h------cCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHH
Confidence 44332221 1 26999999999999985 333444442221 100 0000011110000000000000
Q ss_pred --CCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC------------------C
Q 046506 155 --YKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR------------------H 214 (310)
Q Consensus 155 --~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~------------------~ 214 (310)
........+........|.+++ |...++.++++..+++..+.+.|++.|.+..+.-| .
T Consensus 261 ~~~~~~~~~~g~~~sp~~a~l~~r--gL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~ 338 (432)
T PRK06702 261 KARVQLLRDYGNCMSPFNAYISNI--GLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGA 338 (432)
T ss_pred HHHHHHHHHccCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCC
Confidence 0000011122334455555544 55788999999999999999999999988654321 1
Q ss_pred ceEEEEEEcC
Q 046506 215 FAVVCFRVSP 224 (310)
Q Consensus 215 ~~~v~~~~~~ 224 (310)
.++++|.+.+
T Consensus 339 gg~~sf~l~~ 348 (432)
T PRK06702 339 SGVLTFGIKG 348 (432)
T ss_pred ceEEEEEecC
Confidence 3688898864
No 216
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.45 E-value=1.5e-11 Score=115.33 Aligned_cols=227 Identities=11% Similarity=0.012 Sum_probs=131.0
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEec-cCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATI-GTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~-~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
++++|++.|.+... ....|++.- .....|.+.| +++|.++|++||+++++|++|.+.............++
T Consensus 185 ~~~~l~~~l~~~~~---~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v- 260 (423)
T PRK05964 185 TLDALEALLEKHAG---EIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGV- 260 (423)
T ss_pred HHHHHHHHHHhCCC---cEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCC-
Confidence 37888888864321 233455544 3455566554 99999999999999999999965433221111011223
Q ss_pred CCCeeeeecccccccc-cceEEEEEeCchhHHhhhccC---CccccccccccccccCCCCceeccCCCcchHHHHHHHHH
Q 046506 102 GADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTN---PEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRN 177 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~---~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 177 (310)
..|++++ .|+++++ ...|+++.+ ++.. +.+... ..++... ++ ++.+....++.++++.
T Consensus 261 ~pDi~~~--~K~l~gG~~p~~av~~~-~~i~-~~~~~~~~~~~~~~~~-------------T~-~~np~~~aaa~a~l~~ 322 (423)
T PRK05964 261 SPDIMCL--SKGLTGGYLPLAATLCT-AEIF-EAFYSDDRAKAFMHSP-------------SY-TANPLACAAANASLDL 322 (423)
T ss_pred CCCeeee--ehhhhcCcccceEEEEc-HHHH-HhhhcCCcccccccCC-------------CC-CcCHHHHHHHHHHHHH
Confidence 3787766 4999776 467776654 4333 332110 0001000 00 1112223334444544
Q ss_pred hCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC--CCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHH
Q 046506 178 YGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP--RHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLE 255 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 255 (310)
+.. +.+.++..++.+++++.|+++.++..+.. ....++.+.+.... . ......+.+
T Consensus 323 l~~---~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~---------------~----~~~~~~l~~ 380 (423)
T PRK05964 323 FED---EPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPV---------------L----ERDGPALRA 380 (423)
T ss_pred HHh---cCHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCc---------------c----hhHHHHHHH
Confidence 422 34667777888888888876533322221 23445566665421 0 122356777
Q ss_pred HHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 256 SINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 256 ~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
.|.++|.+ +.+. ...+|++++ ..+|++|||.+++++++.+.+
T Consensus 381 ~l~~~Gv~-v~~~----~~~lR~~p~-l~~t~edId~~v~~l~~al~~ 422 (423)
T PRK05964 381 FALERGVL-LRPL----GNTIYLMPP-YIITAEELDRITDAIVEVADE 422 (423)
T ss_pred HHHHCCeE-EEec----CCEEEEeCC-cccCHHHHHHHHHHHHHHHhh
Confidence 88888854 4332 257999955 689999999999999988765
No 217
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.45 E-value=4.7e-12 Score=116.02 Aligned_cols=230 Identities=13% Similarity=0.101 Sum_probs=145.2
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|+. ++.+|.++ .+.+|+++|++++.+.. +.++++++.+|++|.+.+.+++.++++..++++++|++
T Consensus 122 ~~~~g~~---~~~i~~~~--~~~~d~~~l~~~~~~~~-----~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~ 191 (356)
T PRK04870 122 AKLAGLE---FVGVPLTA--DFTLDLPAMLAAIAEHR-----PALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEA 191 (356)
T ss_pred HHHcCCE---EEEecCCC--CCCCCHHHHHHHhhcCC-----CCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECC
Confidence 4567776 99999985 35899999999996431 34777778899999999988888888777899999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceec
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
+..... ........... --.+..|.+| ++.| .-+|+++. ++..+++.......+ .
T Consensus 192 y~~~~~--~~~~~~~~~~~-~vi~~~S~SK-~~~~GlRiG~~i~-~~~~i~~~~~~~~~~----~--------------- 247 (356)
T PRK04870 192 YQPFAG--DSWLPRLARFP-NLLVMRTVSK-LGLAGLRLGYLAG-HPAWIAELDKVRPPY----N--------------- 247 (356)
T ss_pred chhhcC--cchHHHHhhCC-CEEEEecchh-hhhHHHhhhhhhC-CHHHHHHHHHccCCC----c---------------
Confidence 864321 11111111111 2357789999 4443 23777754 444443322111111 0
Q ss_pred cCCCcchHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccc
Q 046506 162 LSRRFRSLKLWFVLRNY-GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLL 240 (310)
Q Consensus 162 ~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
...+...++...+ ..+.+++..++..++.+.+.+.|++++++.+. ++..+.+.+.+.+.
T Consensus 248 ----~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~--------------- 307 (356)
T PRK04870 248 ----VNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGVTVF-PSAANFILVRVPDA--------------- 307 (356)
T ss_pred ----CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECCCH---------------
Confidence 0111122222222 22346777788888999999999988888764 55666666655421
Q ss_pred hhHHHHHHHHHHHHHHHHhcCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 241 SEEERINEFNRELLESINASGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 241 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
.++.+.+.+.|.......... ..+++|+|+. +.+++++|+++|+++
T Consensus 308 ----------~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~ 355 (356)
T PRK04870 308 ----------AAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG----TPEENAQFLAALKAA 355 (356)
T ss_pred ----------HHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC----CHHHHHHHHHHHHHh
Confidence 346666767775443332222 3579999954 578999999999875
No 218
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.45 E-value=3.5e-12 Score=119.22 Aligned_cols=179 Identities=16% Similarity=0.180 Sum_probs=110.5
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
..|+. +++++.+ |+++++++|+++ +.+|++.+.+|++|.+.|+++|+++|+++|++++||++++
T Consensus 119 ~~G~~---v~~v~~~-------d~~~l~~~l~~~------t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~ 182 (418)
T TIGR01326 119 RLGIE---VRFVDPD-------DPEEFEKAIDEN------TKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFA 182 (418)
T ss_pred HcCcE---EEEECCC-------CHHHHHHhcCcC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCc
Confidence 35555 6666642 689999999764 3477888889999999999999999999999999999997
Q ss_pred cccccChhhhhhhcCCCCCCeeeeecccccccccc-eEEEEEeCchhHHhhhccCCccccccccccccc-cCC-------
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD-CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQV-VDY------- 155 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~-~~~------- 155 (310)
.+....+. . .++|+++.|++|+++++.. .|++++..+... ...... ..+.......... ...
T Consensus 183 ~~~~~~~l------~-~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~-~~~~~~-~~~~~~~~~q~a~~~~~~~~~~~~ 253 (418)
T TIGR01326 183 TPYLCRPI------D-HGADIVVHSATKYIGGHGTAIGGVIVDGGKFD-WANGRF-PLFTTPDPSYHGLVFTETFGNPAF 253 (418)
T ss_pred hhhcCCch------h-cCCeEEEECccccccCCccceEEEEEeccccc-cccccc-ccccCCCCccccchhhhhhchhhH
Confidence 65322111 1 2589999999999987532 666666543211 110000 0000000000000 000
Q ss_pred ----C-CceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEe
Q 046506 156 ----K-DWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVV 210 (310)
Q Consensus 156 ----~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~ 210 (310)
+ ......|-.......|..+ .+...+..++++..+++..+.+.|.+.|++..+
T Consensus 254 ~~~~~~~~~~~~G~~~~p~~a~~~~--~~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V 311 (418)
T TIGR01326 254 IVKARVQLLRDLGAALSPFNAFLLL--QGLETLSLRMERHVENALKVAEFLEAHPKVAWV 311 (418)
T ss_pred HHHHHHHHHHhcCCCCCHHHHHHHH--CCcccHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 0 0000011112233444433 355678888888889999999999999998654
No 219
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.45 E-value=8.1e-12 Score=115.11 Aligned_cols=256 Identities=9% Similarity=0.085 Sum_probs=142.5
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
...|.. +++++++++ ++.+|++++++++++. +.+|+.+ +.+|...|+++|.++|++||+++++|++|
T Consensus 89 ~~~G~~---~v~vd~d~~-~~~~d~~~le~~i~~~------tk~Iip~---~~~G~~~d~~~I~~la~~~~i~vIeDaa~ 155 (376)
T TIGR02379 89 VLRGAK---IVFVDIRPD-TMNIDETLIESAITHR------TKAIVPV---HYAGVACDMDTIMALANKHQLFVIEDAAQ 155 (376)
T ss_pred HHcCCE---EEEEecCCC-cCCCCHHHHHHhcCcC------ceEEEEe---CCCCCccCHHHHHHHHHHCCCEEEEECcc
Confidence 455776 999999975 4789999999999764 3355543 45799999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccc-cCCCCceecc
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQV-VDYKDWQITL 162 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~-~~~~~~~~~~ 162 (310)
+.+...... . ...+.++.++++...|.+......|++++++++...+..... .+-.......... ..+ .+ ...
T Consensus 156 ~~g~~~~~~-~--~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~-~~-~~~ 229 (376)
T TIGR02379 156 GVMSTYKGR-A--LGSIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIR-EKGTNRSQFFRGEVDKY-TW-RDI 229 (376)
T ss_pred ccCCccCCc-c--cCCCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHH-HhCCCCccccccCCCcc-ee-eee
Confidence 876532111 0 111222344444444555432235677777675543332111 0000000000000 000 00 112
Q ss_pred CCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCC--C-eEEec-CCC--c--eEEEEEEcCCcchhhhhhh
Q 046506 163 SRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDK--R-FEVVF-PRH--F--AVVCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 163 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~--~-~~v~~-~~~--~--~~v~~~~~~~~~~~~~~~~ 234 (310)
|.++..-.+.+++.......++++.++..+++++..+.|.+++ + +.+.. ++. . ..+.+.+.+..
T Consensus 230 g~n~~~~~~~Aa~g~~qL~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------- 301 (376)
T TIGR02379 230 GSSYLPSELQAAYLWAQLEQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKDED-------- 301 (376)
T ss_pred cccCCccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECCcC--------
Confidence 2333332333333333346788888888899999999988764 2 23221 111 1 12333332210
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhcCcEEEE---Ee-------EE---C---------CEeEEEEEccCCCCCHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESINASGKAYMT---HA-------VL---G---------GIYAIRFAAGATLTEERHVMV 292 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~-------~~---~---------~~~~iRis~~~~~~t~edi~~ 292 (310)
-..++.+.|.++|+.... +. .+ . ....+.+- .++..+++|+++
T Consensus 302 --------------~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP-~~~~l~~~~~~~ 366 (376)
T TIGR02379 302 --------------DRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLP-LYYGLSKEDQAR 366 (376)
T ss_pred --------------CHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEcc-CCCCCCHHHHHH
Confidence 013666777777653211 10 00 0 03356665 457899999999
Q ss_pred HHHHHHHHH
Q 046506 293 AWTVVQEHL 301 (310)
Q Consensus 293 li~~l~~~~ 301 (310)
++++|++..
T Consensus 367 i~~~i~~~~ 375 (376)
T TIGR02379 367 VIQTICDYL 375 (376)
T ss_pred HHHHHHHHh
Confidence 999998754
No 220
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.44 E-value=8.2e-12 Score=115.25 Aligned_cols=254 Identities=10% Similarity=0.073 Sum_probs=142.6
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+...|+. +++++++++ .+.+|+++|+++|++. +.+|+.++ .+|...++++|.++|++||+++++|+|
T Consensus 88 ~~~~G~~---~v~~d~d~~-~~~~d~~~le~~i~~~------tk~i~~~~---~~G~~~~~~~i~~la~~~~i~vIeD~a 154 (375)
T PRK11706 88 FVLRGAK---IVFVDIRPD-TMNIDETLIEAAITPK------TRAIVPVH---YAGVACEMDTIMALAKKHNLFVVEDAA 154 (375)
T ss_pred HHHcCCE---EEEEecCCC-cCCcCHHHHHHhcCCC------CeEEEEeC---CCCCccCHHHHHHHHHHcCCEEEEECc
Confidence 3456776 899999875 4689999999999764 33555543 479889999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecc--cccccccceEEEEEeCchhHHhhhccC-CccccccccccccccCCCCce
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAH--KWFFTTLDCCCLWVKDPSDLVNSLSTN-PEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~h--K~l~~p~g~g~l~v~~~~~~~~~~~~~-~~y~~~~~~~~~~~~~~~~~~ 159 (310)
|+.+..... +. ... ..|+-++|+| |.+.. ...|+++++++....+..... ........ ..+......+
T Consensus 155 ~a~g~~~~~--~~-~g~--~~~~~~~Sf~~~K~l~~-g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~- 225 (375)
T PRK11706 155 QGVMSTYKG--RA-LGT--IGHIGCFSFHETKNYTA-GEGGALLINDPALIERAEIIREKGTNRSQF--FRGQVDKYTW- 225 (375)
T ss_pred cccccccCC--ee-eec--CcCEEEEeCCCCccccc-cCCeEEEECCHHHHHHHHHHHHcCCCcchh--hccCCCccee-
Confidence 987753211 11 111 2455566666 98865 334556666665433221110 00000000 0000000000
Q ss_pred eccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCC---eEEecCC-C----ceEEEEEEcCCcchhhh
Q 046506 160 ITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKR---FEVVFPR-H----FAVVCFRVSPSAVMDKL 231 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~---~~v~~~~-~----~~~v~~~~~~~~~~~~~ 231 (310)
...+..+..-.+.+++.......+++..++..++++++.+.|.++++ +.+...+ . ...+.+.+.+.
T Consensus 226 ~~~g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 299 (375)
T PRK11706 226 VDIGSSYLPSELQAAYLWAQLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDL------ 299 (375)
T ss_pred eecccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCc------
Confidence 11122222222333333333456788888888999999999988762 4432112 1 12333333321
Q ss_pred hhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEE---EeE-------E----C--------CEeEEEEEccCCCCCHHH
Q 046506 232 KTKYENSLLSEEERINEFNRELLESINASGKAYMT---HAV-------L----G--------GIYAIRFAAGATLTEERH 289 (310)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~~-------~----~--------~~~~iRis~~~~~~t~ed 289 (310)
....++.+.|.++|+.... +.. + . ....+-+- .++..+++|
T Consensus 300 ----------------~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP-~~~~l~~~~ 362 (375)
T PRK11706 300 ----------------EDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLP-LFYNLTDVE 362 (375)
T ss_pred ----------------CCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEecc-CCCCCCHHH
Confidence 0113566677777653111 100 0 0 12345554 456788999
Q ss_pred HHHHHHHHHHHH
Q 046506 290 VMVAWTVVQEHL 301 (310)
Q Consensus 290 i~~li~~l~~~~ 301 (310)
+++++++|++..
T Consensus 363 ~~~i~~~i~~~~ 374 (375)
T PRK11706 363 QRTVIDTILEFF 374 (375)
T ss_pred HHHHHHHHHHHh
Confidence 999999998764
No 221
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.44 E-value=1.1e-11 Score=114.23 Aligned_cols=235 Identities=14% Similarity=0.066 Sum_probs=143.5
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHH--hCcEEEee
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQ--FGIWVHVD 80 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~--~g~~l~vD 80 (310)
++..|+. ++.+|.+++ +.+|++++++++++.+ .++++++.+|++|.+.|.+++.++++. .++++++|
T Consensus 129 ~~~~g~~---~~~v~~~~~--~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~D 197 (371)
T PRK05166 129 PTMMGAR---VERVTVTPD--LGFDLDALCAAVARAP------RMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVD 197 (371)
T ss_pred HHHcCCe---EEEeecCCC--CCCCHHHHHHhhhcCC------CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEE
Confidence 4556776 999999864 4899999999987643 477889999999999998777766654 48899999
Q ss_pred cccccccccChhhh--hhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 81 AAYAGSACICPEFR--HFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 81 ~a~~~~~~~~~~~~--~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
+++.......+... ........--++..|..|.++.| .-+|++++.++............+ .
T Consensus 198 e~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~~~-~-------------- 262 (371)
T PRK05166 198 EAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRTPF-N-------------- 262 (371)
T ss_pred CcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhccCC-C--------------
Confidence 99864442111000 00111101125678999998744 456777766664432221111000 0
Q ss_pred ceeccCCCcchHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhc
Q 046506 158 WQITLSRRFRSLKLWFVLRNY-GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~ 236 (310)
...+...+++..+ ..+.+++..+...+..+.+.+.|++. ++.+. ++..+.+.+.....
T Consensus 263 --------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-p~~g~fl~~~~~~~----------- 321 (371)
T PRK05166 263 --------VNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEM-GYRIA-PSRANFLFFDARRP----------- 321 (371)
T ss_pred --------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-cCeeC-CCcCCEEEEeCCCC-----------
Confidence 0111112222222 23456777777778888899999886 77653 55565554443211
Q ss_pred cccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 237 NSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
..++.+.+.++|............+++|+++. ++++.++++++|+.+.
T Consensus 322 -------------~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~----~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 322 -------------ASAVAEALLRQGVIVKPWKQPGFETFIRVSIG----SPEENDHFVAALDKVL 369 (371)
T ss_pred -------------HHHHHHHHHHCCeEEecCCCCCCCCeEEEEcC----CHHHHHHHHHHHHHHh
Confidence 13567777777654333222233678999955 4777899999988764
No 222
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.44 E-value=6.6e-11 Score=110.22 Aligned_cols=222 Identities=9% Similarity=0.019 Sum_probs=133.0
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++|+++|++.. .....|++....+++|.+.| +++|.++|++||+++++|++|.+.............++ .
T Consensus 172 d~~~le~~l~~~~---~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~-~ 247 (401)
T TIGR01885 172 NLEALEEALEDHG---PNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENV-K 247 (401)
T ss_pred CHHHHHHHHHhcC---CCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCC-C
Confidence 6899999996531 12346667667778899887 99999999999999999999854322221111001222 3
Q ss_pred CCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
.|+++++ |.+++. ..+|++.. +++.. +.+.. .+.. .++ ++.+.....+.++++.+..+
T Consensus 248 ~di~~~g--K~l~~g~~~ig~v~~-~~~i~-~~~~~--~~~~--------------~t~-~~~p~~~~aa~a~L~~i~~~ 306 (401)
T TIGR01885 248 PDIVLLG--KALSGGVYPVSAVLA-DDDVM-LTIKP--GEHG--------------STY-GGNPLACAVAVAALEVLEEE 306 (401)
T ss_pred CCEEEee--ccccCCCCCcEEEEE-cHHHH-hhccC--CCCC--------------CCC-CCCHHHHHHHHHHHHHHHhc
Confidence 6887765 988753 23455554 44443 32211 0100 011 11233344455566655333
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCeEEec--CCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSDKRFEVVF--PRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA 259 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 259 (310)
.+.++..++++++++.|++++ ..++. .....+..+.+.... . .....++.+.|.+
T Consensus 307 ---~l~~~~~~~~~~~~~~L~~l~-~~~~~~~~g~g~~~~i~~~~~~---------------~----~~~~~~l~~~l~~ 363 (401)
T TIGR01885 307 ---KLAENAEKLGEIFRDQLKKLP-KPIITEVRGRGLLNAIVIDESK---------------T----GRTAWDLCLKLKE 363 (401)
T ss_pred ---cHHHHHHHHHHHHHHHHHhcc-CCceeEEeecCeeEEEEeccCc---------------c----hhHHHHHHHHHHh
Confidence 344677778999999998873 22322 123444444443321 0 0123567788888
Q ss_pred cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 260 SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 260 ~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
+|. ++.+. +...+||+++ ...+++||+.++++|++.+
T Consensus 364 ~Gv-~v~~~---~~~~lRi~p~-l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 364 KGL-LAKPT---HGNIIRLAPP-LVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred CCE-EEEec---CCCEEEEeCC-ccCCHHHHHHHHHHHHHHh
Confidence 874 44432 3568999955 6799999999999998754
No 223
>PRK07337 aminotransferase; Validated
Probab=99.43 E-value=8.7e-12 Score=115.59 Aligned_cols=242 Identities=12% Similarity=0.013 Sum_probs=139.2
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD 80 (310)
+.+|.. ++.+|.++.+++.+|+++|++.+.+. +.++++.+++|++|.+.+ +++|+++|+++|+++++|
T Consensus 132 ~~~g~~---~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~D 202 (388)
T PRK07337 132 AAAEGR---PVLVPSGPAERFQLTAADVEAAWGER------TRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVD 202 (388)
T ss_pred HHcCCE---EEEeecCCccCCcCCHHHHHhhcCcc------ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEe
Confidence 345655 88999986445789999999998754 347778889999999876 688899999999999999
Q ss_pred cccccccccChhhhhhhcCCCCCCee-eeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCc
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSF-SLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDW 158 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~-~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 158 (310)
.++........ ... .... ..+++ ..|.+|.++.| .-+|+++.. +..+....... .+....
T Consensus 203 e~y~~~~~~~~-~~~-~~~~-~~~vi~~~S~SK~~~~~G~RiG~~~~~-~~l~~~l~~~~-~~~~~~------------- 264 (388)
T PRK07337 203 EIYQGLSYDAA-PVS-ALSL-GDDVITINSFSKYFNMTGWRLGWLVVP-EALVGTFEKLA-QNLFIC------------- 264 (388)
T ss_pred ccccccccCCC-CcC-hhhc-cCCEEEEEechhhcCCchhheeeeecC-HHHHHHHHHHH-HHhccC-------------
Confidence 99864332111 111 1111 23454 46899998755 237777764 33332221111 001000
Q ss_pred eeccCCCcchHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC-CceEEEEEEcCCcchhhhhhh
Q 046506 159 QITLSRRFRSLKLWFVLRNYG---VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR-HFAVVCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-~~~~v~~~~~~~~~~~~~~~~ 234 (310)
.......++...+. ...+.+..++..+..+.+.+.|+++ ++.+...| ....+.+.+.....
T Consensus 265 -------~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~~~p~~g~f~~~~~~~~~~------- 329 (388)
T PRK07337 265 -------ASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL-GFKVPVMPDGAFYVYADCRGVAH------- 329 (388)
T ss_pred -------CChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCeeEEEEEecccccC-------
Confidence 01111222222221 2345666777777888888999875 66543233 44555555543100
Q ss_pred hccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeEEC---CEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESIN-ASGKAYMTHAVLG---GIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~---~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
+.. .-..++...+. +.|.....+.... +.+++|+++.. +++++...++.|.++
T Consensus 330 -----~~~-----~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~---~~~~l~~~l~rl~~~ 386 (388)
T PRK07337 330 -----PAA-----GDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT---SMSRLEEAVARLGKL 386 (388)
T ss_pred -----CCC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC---CHHHHHHHHHHHHHH
Confidence 000 00134555544 4554433333222 25799999763 477777777777654
No 224
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.43 E-value=1.6e-11 Score=113.03 Aligned_cols=239 Identities=12% Similarity=0.063 Sum_probs=144.9
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh--CcEEEeec
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF--GIWVHVDA 81 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~--g~~l~vD~ 81 (310)
...|.. ++.+|.+.+ .+|++++++.+.... +.+++++.++|++|.+.|.+++.++++.. |+++++|.
T Consensus 126 ~~~g~~---~~~vp~~~~---~~~~~~l~~~~~~~~-----~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE 194 (369)
T PRK08153 126 AGFGGR---LVTVPYRDD---REDLDALLDAARREN-----APLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDE 194 (369)
T ss_pred HHcCCe---EEEeeCCCC---CCCHHHHHHHhcccC-----CcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeC
Confidence 345665 888998653 588898887765321 34676778899999999988877777654 89999999
Q ss_pred ccccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 82 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
+++...... .... ......--++..|+.|.++.| .-+|+++. +++.++........+ .
T Consensus 195 ~y~~~~~~~-~~~~-~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~-~~~~~~~l~~~~~~~-~----------------- 253 (369)
T PRK08153 195 AYCETAPAG-AAPP-IDTDDPNVIRMRTFSKAYGLAGARVGYAIG-APGTIKAFDKVRNHF-G----------------- 253 (369)
T ss_pred chhhhcCcc-cchh-hhhcCCCEEEEecchHhccCcchheeeeec-CHHHHHHHHHhhcCC-C-----------------
Confidence 986443211 1111 111111125678999999755 23466654 444432221111111 0
Q ss_pred ccCCCcchHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhcccc
Q 046506 161 TLSRRFRSLKLWFVLRNYG-VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSL 239 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 239 (310)
.......++...+. .+.+++..+...++.+++.+.|++. ++.+. ++.++.+.+.+...
T Consensus 254 -----~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-p~~~~f~~~~~~~~-------------- 312 (369)
T PRK08153 254 -----MNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARAN-GLTPL-PSATNFVAIDCGRD-------------- 312 (369)
T ss_pred -----CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCcCcEEEEECCCC--------------
Confidence 01222233333332 3456677777888888888888875 66644 45566555544321
Q ss_pred chhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 240 LSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 240 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
......+.+.|.+.|.....+....+.+++|+++. +++|+++++++|+++...+++
T Consensus 313 -------~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~----~~~~~~~~~~al~~~~~~~~~ 368 (369)
T PRK08153 313 -------GAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCG----PDEELDLFAEALPEALEAARK 368 (369)
T ss_pred -------cccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC----CHHHHHHHHHHHHHHHHHhhc
Confidence 11234677778788754433433223569999944 589999999999999876654
No 225
>PRK07683 aminotransferase A; Validated
Probab=99.43 E-value=1.7e-11 Score=113.66 Aligned_cols=244 Identities=13% Similarity=0.101 Sum_probs=145.5
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
+..+|.. +++++.+++ ++.+|++++++.+.+. +.++++..++|.+|.+.+ +++|+++|+++|+++++
T Consensus 130 ~~~~g~~---~~~~~~~~~-~~~~~~~~l~~~~~~~------~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~ 199 (387)
T PRK07683 130 IRLCGAK---PVFIDTRST-GFRLTAEALENAITEK------TRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLS 199 (387)
T ss_pred HHHcCCE---EEEeecCcc-cCCCCHHHHHHhcCcC------ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEE
Confidence 3456776 889998865 4678999999988654 347788889999999865 88899999999999999
Q ss_pred ecccccccccChhhhhhhc--CCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 80 DAAYAGSACICPEFRHFID--GVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~--~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
|++++......+ ...... +...-.++..|..|.++.| .-+|+++. ++..+...... ..+....
T Consensus 200 De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~-~~~l~~~~~~~-~~~~~~~----------- 265 (387)
T PRK07683 200 DEIYSELVYEQP-HTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFA-PSYLAKHILKV-HQYNVTC----------- 265 (387)
T ss_pred ecccccceeCCC-cCChhhccCCcCCeEEEeeccccccCccceeEEEEc-CHHHHHHHHHH-HHhccCC-----------
Confidence 999975543211 111111 1111246779999999865 33666654 44333332111 1111100
Q ss_pred CceeccCCCcchHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCC-cchhhhhh
Q 046506 157 DWQITLSRRFRSLKLWFVLRNY--GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPS-AVMDKLKT 233 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~-~~~~~~~~ 233 (310)
...+...++...+ +...+++..++..+..+.+.+.|.+. ++.+. ++..+.+.+...+. ..
T Consensus 266 ---------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~~~~~~~~~~~~~~~~------ 328 (387)
T PRK07683 266 ---------ASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM-GLDVE-KPTGAFYLFPSIGHFTM------ 328 (387)
T ss_pred ---------CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCeeEEEEEecccCCC------
Confidence 0111111222222 33456666777778888888888875 66654 44555443432221 10
Q ss_pred hhccccchhHHHHHHHHHHHHHHH-HhcCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 234 KYENSLLSEEERINEFNRELLESI-NASGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
+ ..++...+ .+.|....++.... +.+.+|+++. . +++++...++.|.+++...+
T Consensus 329 --------~-------~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~-~--~~~~~~~al~~l~~~l~~~~ 385 (387)
T PRK07683 329 --------S-------SFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYA-Y--SIETLKEGLDRLEAFLQQKA 385 (387)
T ss_pred --------C-------HHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEec-C--CHHHHHHHHHHHHHHHHhhc
Confidence 0 12344443 44554433333222 3579999966 2 58889999998888776543
No 226
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.43 E-value=8.4e-12 Score=115.00 Aligned_cols=174 Identities=14% Similarity=0.140 Sum_probs=119.0
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+.+|+. +.+++.+ +.+.++++|++++ .+|.+++++|+++.+.||++|+++||++|++++||+++
T Consensus 125 ~~~Gi~---v~~vd~~-------~~e~l~~al~~~T------klV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~ 188 (395)
T PRK05967 125 KRLGVE---VEYYDPE-------IGAGIAKLMRPNT------KVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTW 188 (395)
T ss_pred HhcCeE---EEEeCCC-------CHHHHHHhcCcCc------eEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCc
Confidence 445665 7777542 2377899987754 48999999999999999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceec
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
+.+...-+. . .++|++..|..|++++..+ .|++ +.++....+.... .. .
T Consensus 189 a~p~~~~pl----~---~GaDivv~S~tKy~~Gh~d~~~G~v-~~~~~~~~~l~~~----~~-----------------~ 239 (395)
T PRK05967 189 ATPLYFRPL----D---FGVDISIHAATKYPSGHSDILLGTV-SANEKCWPQLLEA----HG-----------------T 239 (395)
T ss_pred cCceecChh----H---cCCCEEEEecccccCCCCCeeEEEE-EcCHHHHHHHHHH----HH-----------------H
Confidence 765432221 1 2699999999999764211 4444 4444332222110 00 0
Q ss_pred cCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeE-EecC-----C-----------CceEEEEEEcC
Q 046506 162 LSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFE-VVFP-----R-----------HFAVVCFRVSP 224 (310)
Q Consensus 162 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~-v~~~-----~-----------~~~~v~~~~~~ 224 (310)
.|....+..+|..+ .|...+.-++++..+++..+.+.|++.|.+. |.-| | ..++++|.+..
T Consensus 240 ~G~~~~p~da~l~~--rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~ 317 (395)
T PRK05967 240 LGLCAGPDDTYQIL--RGLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAA 317 (395)
T ss_pred cCCCCCHHHHHHHH--cCcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcC
Confidence 11112344455444 4778899999999999999999999999884 4322 1 14688998863
No 227
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.43 E-value=1.2e-11 Score=116.34 Aligned_cols=238 Identities=10% Similarity=0.056 Sum_probs=145.4
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEe-ccCCcccccCChH---HHHHHHHHh-CcE
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCAT-IGTTAITAVDTLK---PLCDVAKQF-GIW 76 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~-~~~~~~G~~~pl~---~I~~l~~~~-g~~ 76 (310)
+++.+|+. ++.||++++ .+|+++|++++++. +.+++++ ..+|++|.+.+.+ +|.++|++| +++
T Consensus 181 ~~~~~g~~---~~~v~~~~~---g~~~~~l~~~~~~~------~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ 248 (431)
T PRK15481 181 MLRYAGFS---ASPVSVDAE---GMQPEKLERALAQG------ARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVL 248 (431)
T ss_pred HHHHcCCe---EEeeccCCC---CCCHHHHHHHHhcC------CCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCce
Confidence 35567776 999999753 48999999998653 3355554 8889999999876 899999999 999
Q ss_pred EEeecccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 77 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 77 l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
+++|.+++-.... .+.........--++..|+.|.++...-+|+++ .++................
T Consensus 249 ii~De~Y~~~~~~--~~~~~~~~~~~~vi~~~SfSK~~~~GlRiG~~i-~~~~~~~~~~~~~~~~~~~------------ 313 (431)
T PRK15481 249 VIIDDHFALLSSS--PYHSVIPQTTQRWALIRSVSKALGPDLRLAFVA-SDSATSARLRLRLNSGTQW------------ 313 (431)
T ss_pred EEecCchhhhccC--CCCCCCcCCCCCEEEEeeeccccCCCceeEEEe-CCHHHHHHHHHHHhccccC------------
Confidence 9999998644321 111111111112267789999998435566554 4444332221110000000
Q ss_pred CceeccCCCcchHHHHHHHHHhCH----HHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhh
Q 046506 157 DWQITLSRRFRSLKLWFVLRNYGV----ANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLK 232 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~ 232 (310)
...+...++..++.. ..+++..+...+..+.+.+.|.+. ++.+..+..+..+.+.++..
T Consensus 314 ---------~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~~p~gg~f~~~~l~~~------- 376 (431)
T PRK15481 314 ---------VSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIAIPSPGDGLNLWLPLDTD------- 376 (431)
T ss_pred ---------CCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCeEEEEEECCCC-------
Confidence 011222222222311 235666777788888888888876 67654455565665655431
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEEC---CEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 233 TKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLG---GIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
..++.+.+.+.|.....+..+. ...++|+|+.. .++++++.+++.|.++++
T Consensus 377 -----------------~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~--~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 377 -----------------SQATALTLAKSGWLVREGEAFGVSAPSHGLRITLST--LNDAEINRLAADLHQALN 430 (431)
T ss_pred -----------------HHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCC--CChHHHHHHHHHHHHHhc
Confidence 1345566666776555433331 23589999774 568999999999988753
No 228
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.43 E-value=3.9e-12 Score=116.88 Aligned_cols=165 Identities=20% Similarity=0.308 Sum_probs=112.0
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhC-cEEEeecccccccccChhhhhhhcCCCCCC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFG-IWVHVDAAYAGSACICPEFRHFIDGVEGAD 104 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g-~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D 104 (310)
-|+++++++|+++ +.+|.+..++|++..+.||++|+++||++| ++++||.+++.+....+. . .++|
T Consensus 128 ~d~~~l~~~l~~~------t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~~pL-~------~GaD 194 (386)
T PF01053_consen 128 TDLEALEAALRPN------TKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYNQNPL-E------LGAD 194 (386)
T ss_dssp TSHHHHHHHHCTT------EEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTTC-GG-G------GT-S
T ss_pred hhHHHHHhhcccc------ceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceeeeccC-c------CCce
Confidence 3579999999885 458999999999999999999999999999 999999999776443321 1 1599
Q ss_pred eeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 105 SFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 105 ~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
+++.|+.|++++... .|++.+++...+.+.+... .. ..|-...+..+|..++ |...
T Consensus 195 ivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~---~~-----------------~~G~~~~p~da~ll~r--gl~T 252 (386)
T PF01053_consen 195 IVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREF---RR-----------------LLGATLSPFDAWLLLR--GLRT 252 (386)
T ss_dssp EEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHH---HH-----------------HHT-B--HHHHHHHHH--HHTT
T ss_pred EEEeeccccccCCcceeeEEEEECchhhhhhhhcch---hh-----------------hcCccchHHHHHHHhc--CCCc
Confidence 999999999986532 4556655522222211100 00 0111123344555444 6678
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCeE-EecC-----C-----------CceEEEEEEcCC
Q 046506 183 LRHFLRSHVNMAKLFERLVGSDKRFE-VVFP-----R-----------HFAVVCFRVSPS 225 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~~~~~-v~~~-----~-----------~~~~v~~~~~~~ 225 (310)
+..++++..++|+.+.+.|++.|.+. |.-| | ..++++|.+.+.
T Consensus 253 l~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~ 312 (386)
T PF01053_consen 253 LPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGG 312 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccc
Confidence 89999999999999999999999996 4422 1 246899999873
No 229
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.42 E-value=5.9e-11 Score=112.52 Aligned_cols=253 Identities=11% Similarity=0.077 Sum_probs=148.9
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEeecc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD~a 82 (310)
.|.. ++.||+++.+++.+|+++|++++.+..+.+.++.+++++.++|++|.+.+ +++|.++|++||+++++|.+
T Consensus 156 ~g~~---~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~ 232 (468)
T PLN02450 156 TGVE---IVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEI 232 (468)
T ss_pred CCcE---EEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEcc
Confidence 5665 88999875445788999999999875433444667778889999999877 56788899999999999999
Q ss_pred cccccccChhhhhhh---c-----CC--CCCCeeeeecccccc-cccceEEEEEeCchhHHhhhccCCcccccccccccc
Q 046506 83 YAGSACICPEFRHFI---D-----GV--EGADSFSLNAHKWFF-TTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQ 151 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~---~-----~~--~~~D~~~~~~hK~l~-~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~ 151 (310)
++...+....+.... . +. ..-=.+..|..|.++ ...-+|+++..++... ..+.....+.. .
T Consensus 233 Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~-~~~~~~~~~~~-~------ 304 (468)
T PLN02450 233 YSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVV-SAATKMSSFGL-V------ 304 (468)
T ss_pred ccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHH-HHHHHHhhcCC-C------
Confidence 875432211111100 0 00 001146689999987 4466777766544322 22211111110 0
Q ss_pred ccCCCCceeccCCCcchHHHHHHHHHhCH-----HHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCce-EEEEEEcCC
Q 046506 152 VVDYKDWQITLSRRFRSLKLWFVLRNYGV-----ANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFA-VVCFRVSPS 225 (310)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~-~v~~~~~~~ 225 (310)
..+...++...+.. ..+++..++..+..+.+.+.|.+. ++.+. ++..+ .+.+.+...
T Consensus 305 ---------------s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~-~~~~g~flwi~l~~~ 367 (468)
T PLN02450 305 ---------------SSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCL-KSNAGLFCWVDMRHL 367 (468)
T ss_pred ---------------CHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCceEEEEEEchHh
Confidence 11112222222322 134556777777888888999886 77664 45555 444544321
Q ss_pred cchhhhhhhhccccchhHHHHHHHHHHHHHHHHh-cCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 226 AVMDKLKTKYENSLLSEEERINEFNRELLESINA-SGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
. +..... ...++.+.+.+ .|....++..+. +.+++|+++++ .++++++..++.|++++.
T Consensus 368 ~---------------~~~~~~-~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~--~~~~~l~~~l~ri~~~l~ 429 (468)
T PLN02450 368 L---------------KSNTFE-AEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFAN--MSEETLDLAMKRLKSFVE 429 (468)
T ss_pred c---------------CcCCch-HHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecC--CCHHHHHHHHHHHHHHHH
Confidence 0 000001 11245555554 454433333332 35799999773 468899999999998876
Q ss_pred HH
Q 046506 303 AL 304 (310)
Q Consensus 303 ~~ 304 (310)
..
T Consensus 430 ~~ 431 (468)
T PLN02450 430 SD 431 (468)
T ss_pred hc
Confidence 54
No 230
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.42 E-value=3.8e-11 Score=113.15 Aligned_cols=233 Identities=9% Similarity=0.020 Sum_probs=143.0
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|++++++.|.+....+.....+++.....+.|.+.| ++++.++|++||+++++|.+|.+.......+.-...++ .
T Consensus 214 d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv-~ 292 (459)
T PRK11522 214 NIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENV-Q 292 (459)
T ss_pred CHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCC-C
Confidence 678899998754322233557778878888899888 99999999999999999999965433332211111233 3
Q ss_pred CCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
.|+++ ..|.+++. ...|.++.+++ .. +.+... ++.... + -++-+..+.+..++++.+..+
T Consensus 293 PDivt--~gK~lggG~~Pigav~~~~~-i~-~~~~~~-~~~~~~-------------T-~~gnp~~~Aaala~L~~i~~~ 353 (459)
T PRK11522 293 PDILC--LAKALGGGVMPIGATIATEE-VF-SVLFDN-PFLHTT-------------T-FGGNPLACAAALATINVLLEQ 353 (459)
T ss_pred CCEEE--echhhhCCCccceeEEEcHH-HH-HHhccC-CcccCC-------------C-CCCCHHHHHHHHHHHHHHhcc
Confidence 68764 47988864 24677777644 33 222211 111110 0 111122334455566655433
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCC-CeE-EecCC--CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSDK-RFE-VVFPR--HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESI 257 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~~-~~~-v~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (310)
...++..++.++|++.|+++. ++. ++... ...++.+.+... .....+.+.+
T Consensus 354 ---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~----------------------~~~~~i~~~l 408 (459)
T PRK11522 354 ---NLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDN----------------------EIGYNFASEM 408 (459)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCc----------------------hHHHHHHHHH
Confidence 466778888888888887641 222 22111 234555655432 1234577778
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhhc
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLSA 307 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~~ 307 (310)
.++|. ++.+. ..+..++|++++ ...|++||+.++++|.+.+..+.+.
T Consensus 409 ~~~Gv-l~~~~-~~~~~~lr~~Pp-l~~t~~~id~~l~~l~~~l~~~~~~ 455 (459)
T PRK11522 409 FRQRV-LVAGT-LNNAKTIRIEPP-LTLTIEQCEQVLKAARKALAAMRVS 455 (459)
T ss_pred HHCCe-EEEec-CCCCCEEEEECC-ccCCHHHHHHHHHHHHHHHHHHHHh
Confidence 78874 44332 124578999966 6799999999999999998877543
No 231
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.42 E-value=2e-11 Score=113.09 Aligned_cols=243 Identities=13% Similarity=0.109 Sum_probs=140.4
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
+..+|.. ++.+|.++++++.+|+++|++++++. +.++++..++|++|.+.+ +++|.++|++||+++++
T Consensus 130 ~~~~g~~---~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~ 200 (384)
T PRK06348 130 IEMVGGK---PIILETYEEDGFQINVKKLEALITSK------TKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIIS 200 (384)
T ss_pred HHHcCCE---EEEecCCcCcCCcCCHHHHHHhhCcC------ccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEE
Confidence 3445655 78888754445679999999998653 336667788999999876 77899999999999999
Q ss_pred ecccccccccChhhhhh--hcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 80 DAAYAGSACICPEFRHF--IDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~--~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
|.+++....... .... ..+...-.++..|..|.++.| .-+|+++.. +... +.+..-..+....
T Consensus 201 De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~-~~~~-~~~~~~~~~~~~~----------- 266 (384)
T PRK06348 201 DEVYDGFSFYED-FVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAP-DYII-ETAKIINEGICFS----------- 266 (384)
T ss_pred ecccccceeCCC-ccchhhcCCCcCcEEEEecchhccCCccccceeeecC-HHHH-HHHHHHHHhccCC-----------
Confidence 999875543211 1110 111111235668999998744 446776653 4333 2211000000000
Q ss_pred CceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEE-EEEEcCCcchhhhhhhh
Q 046506 157 DWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVV-CFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v-~~~~~~~~~~~~~~~~~ 235 (310)
.-......+..++. ......++..+...+..+++.+.|.+++++.+. +|+.+.+ .+.++....
T Consensus 267 ------~~~~~q~~~~~~l~-~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~-~p~gg~~~~~~~~~~~~-------- 330 (384)
T PRK06348 267 ------APTISQRAAIYALK-HRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLH-PPKGSIYAFINIKKTGL-------- 330 (384)
T ss_pred ------CCHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHhcCCCceec-cCCeeEEEEEecccCCC--------
Confidence 00011112222222 123345566666777788889999887777655 4555544 444432110
Q ss_pred ccccchhHHHHHHHHHHHHHHHHh-cCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINA-SGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
+ ..++...+.+ .|.....+.... +...+|+|+. .++++++..++.|+++
T Consensus 331 ------~-------~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 331 ------S-------SVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACT---VGIEVLEEAFNRIEKM 382 (384)
T ss_pred ------C-------HHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEec---CCHHHHHHHHHHHHhh
Confidence 0 1345555544 454444333222 3579999964 4678888888877654
No 232
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.42 E-value=4.1e-11 Score=110.20 Aligned_cols=236 Identities=9% Similarity=0.034 Sum_probs=144.1
Q ss_pred ceecCCCCCCEEEEecCC-CCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHH--hCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTK-SSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQ--FGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~-~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~--~g~~l~v 79 (310)
++..|+. ++.+|.++ ++.+.+|++++++.+... .+.++++++++|++|.+.|.+++.++++. +++++++
T Consensus 118 ~~~~g~~---~~~v~~~~~~~~~~~d~~~l~~~~~~~-----~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~ 189 (364)
T PRK04781 118 ARLQNAP---LVEVPLVDGADGFHADVPAIVAAALAS-----NAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVV 189 (364)
T ss_pred HHHcCCE---EEEEecCCCccCCCcCHHHHHHHHhcc-----CCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEE
Confidence 4566776 99999853 233568999887655321 14577778899999999999888888765 4799999
Q ss_pred ecccccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCc
Q 046506 80 DAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDW 158 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 158 (310)
|+++.-.... +........... =++.-|+.|.++.| .-+|+++ .+++.+.........|-
T Consensus 190 Deay~~f~~~-~~~~~~~~~~~~-vi~~~SfSK~~gl~GlRvGy~v-~~~~l~~~l~~~~~~~~---------------- 250 (364)
T PRK04781 190 DEAYGEFSDV-PSAVGLLARYDN-LAVLRTLSKAHALAAARIGSLI-ANAELIAVLRRCQAPYP---------------- 250 (364)
T ss_pred eCcchhhcCC-cchHHHHhhCCC-EEEEecChhhcccccceeeeee-CCHHHHHHHHhccCCCC----------------
Confidence 9998644321 111111111111 25668999998744 4467765 45544433222111110
Q ss_pred eeccCCCcchHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhh
Q 046506 159 QITLSRRFRSLKLWFVLRNYG---VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
...+...++...+. .+...+.+++..+..+.+.+.|++++++....++..+.+.+.+...
T Consensus 251 -------~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~---------- 313 (364)
T PRK04781 251 -------VPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFDDA---------- 313 (364)
T ss_pred -------CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcCCH----------
Confidence 01111222222332 2345566667777888999999988887534466676666655321
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE-CCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKAYMTHAVL-GGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
.++.+.+.+.|.....+... ...+++|+++. ++++.++++++|+++.
T Consensus 314 ---------------~~~~~~l~~~gI~v~~~~~~~~~~~~~Ris~~----~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 314 ---------------EAAFQALLAAGVVVRDQRAAPRLSDALRITLG----TPEQNDRVLAALQRTQ 361 (364)
T ss_pred ---------------HHHHHHHHHCCeEEeeCCCCCCCCCeEEEeCC----CHHHHHHHHHHHHHHH
Confidence 35667777777654443322 23568999954 4789999999998764
No 233
>PLN02624 ornithine-delta-aminotransferase
Probab=99.42 E-value=4.9e-11 Score=113.16 Aligned_cols=226 Identities=11% Similarity=0.014 Sum_probs=132.0
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|++.|++.|... +.....|++....+++|.+.| +++|.++|++||+++++|++|.+.............++ .
T Consensus 210 d~~~l~~~l~~~---~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i-~ 285 (474)
T PLN02624 210 DLDALEKIFEED---GDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEV-R 285 (474)
T ss_pred CHHHHHHHHHhC---CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCC-C
Confidence 678999988642 123557888888889999888 99999999999999999999974322221111111223 3
Q ss_pred CCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
.|++++ .|.++++ ..+|.++++++ .+ ..+. +..... ++ ++-+....++.++++.+..+
T Consensus 286 pDiv~l--sK~lggG~~pigav~~~~~-i~-~~~~--~~~~~~--------------T~-~g~pl~~aaa~aaLe~l~~~ 344 (474)
T PLN02624 286 PDVVIL--GKALGGGVIPVSAVLADKD-VM-LCIK--PGEHGS--------------TF-GGNPLASAVAMAALQVVQDE 344 (474)
T ss_pred CCEEEe--cccccCCCCcceeeeecHH-HH-hHhc--cCCcCC--------------CC-CCCHHHHHHHHHHHHHHHhc
Confidence 788887 4988865 35677766432 32 2211 110000 01 11122334444455544332
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC----CC-eEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSD----KR-FEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLES 256 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~----~~-~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 256 (310)
++.++..++.+++++.|.++ +. +.-+ .....++.+.+.... .. .....++.+.
T Consensus 345 ---~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~v-rg~G~~~~i~l~~~~--------------~~----~~~a~~~~~~ 402 (474)
T PLN02624 345 ---KLAERSAKLGQELRDQLQKIQKQFPKLIKEV-RGRGLLNAVVLNSPK--------------LG----PVSAYDVCLK 402 (474)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHHhCCCceEEE-EeeEEEEEEEecCCC--------------cC----hHHHHHHHHH
Confidence 34455556666776666543 22 2212 123344444443311 00 1123467777
Q ss_pred HHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 257 INASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 257 l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
|.+.|. ++.+. +..+|||+++ ..+|++||+.+++.|++++...
T Consensus 403 L~e~GV-~v~p~---~~~~lR~~p~-l~~t~e~id~~l~~L~~~l~~~ 445 (474)
T PLN02624 403 LKERGL-LAKPT---HDTIIRLAPP-LSISEDELQECSKALSDVLEHD 445 (474)
T ss_pred HHhCCe-EEecC---CCCEEEEECC-ccCCHHHHHHHHHHHHHHHHHH
Confidence 877774 44443 4578999955 6799999999999999888654
No 234
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.41 E-value=3.2e-12 Score=114.66 Aligned_cols=257 Identities=14% Similarity=0.106 Sum_probs=156.1
Q ss_pred CcceecCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC-hHHHHHHHHHhCcEEE
Q 046506 1 KAAQIVGIDVKNFRAIKTTKS-SSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT-LKPLCDVAKQFGIWVH 78 (310)
Q Consensus 1 kaa~~~g~~~~~v~~v~~~~~-~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p-l~~I~~l~~~~g~~l~ 78 (310)
||+..+|+. ++.||.... +....|.+.+|++|.+... .+.+.++++.+-..|...| +++|+++|++||++.+
T Consensus 116 kai~~AGl~---~~vV~~~~~~d~l~td~~~ie~~i~~~G~---~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhl 189 (389)
T PF05889_consen 116 KAIERAGLE---PVVVENVLEGDELITDLEAIEAKIEELGA---DNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHL 189 (389)
T ss_dssp HHHHHTT-E---EEEE-EEEETTEEEEHHHHHHHHHHHHCG---GGEEEEEEESSTTTTB----HHHHHHHHHHHT--EE
T ss_pred HHHHhcCCe---EEEeeccCCCCeeeccHHHHHHHHHHhCC---CCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceE
Confidence 567788998 888886432 2346788999999965422 3567778888777777766 9999999999999999
Q ss_pred eecccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCc
Q 046506 79 VDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDW 158 (310)
Q Consensus 79 vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 158 (310)
|.+|++.-.-.....-......+.+|.++-+.-|-|.+|.|.+++...++..+... .. .|-+...
T Consensus 190 vNnAYgvQ~~~~~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~v-s~--~YpGRas------------ 254 (389)
T PF05889_consen 190 VNNAYGVQSSKCMHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGILAV-SK--EYPGRAS------------ 254 (389)
T ss_dssp EEGTTTTT-HHHHHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEESSHHHHHHH-HH--TSHSHBT------------
T ss_pred EccchhhhHHHHHHHHHHHHhcCCcceeeeecCCCEEecCCCcEEEecCHHHHHHH-HH--Hhhhhhh------------
Confidence 99999763221110000001124699999999999999999999988777554322 11 1111110
Q ss_pred eeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCC---CCeEEecCCCceEE-EEEEcCCcchhhhhhh
Q 046506 159 QITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSD---KRFEVVFPRHFAVV-CFRVSPSAVMDKLKTK 234 (310)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~---~~~~v~~~~~~~~v-~~~~~~~~~~~~~~~~ 234 (310)
+...+.+..++..+|..+|...+....++-.++.++|++. -+-++...|..++. .|.......
T Consensus 255 ------~sp~ld~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~------- 321 (389)
T PF05889_consen 255 ------ASPSLDLFITLLSLGCTGYGALLKERKASFPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYE------- 321 (389)
T ss_dssp ------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCT-------
T ss_pred ------cccchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchh-------
Confidence 1133566778888999999999888888888888888652 25555544554433 344433210
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhcCcEE---EEEeEECC--------EeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESINASGKAY---MTHAVLGG--------IYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~~~~--------~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
. . .+..-.|...|..++..- +.+..... ...+-++ ..+..++||||.+++.|+++++
T Consensus 322 --~----~----~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~A-saiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 322 --I----S----QKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAA-SAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp --C----C----SSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEE-E-TT--HHHHHHHHHHHHHHHH
T ss_pred --h----c----cchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHH-HHhCCCHHHHHHHHHHHHHHhC
Confidence 0 0 011135666666665321 11110011 2566675 4578999999999999998764
No 235
>PRK12414 putative aminotransferase; Provisional
Probab=99.41 E-value=1.2e-11 Score=114.47 Aligned_cols=239 Identities=12% Similarity=0.117 Sum_probs=138.3
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccC---ChHHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVD---TLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~---pl~~I~~l~~~~g~~l~vD 80 (310)
+..|+. ++.+|.+++ ++.+|+++|++++++. +.++++.+.+|.+|.+. ++++|+++|++||+++++|
T Consensus 132 ~~~g~~---~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~D 201 (384)
T PRK12414 132 RLQGAT---PVAIKLSPE-DFRVNWDEVAAAITPR------TRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSD 201 (384)
T ss_pred HHcCCE---EEEEecCcc-ccccCHHHHHhhcCcc------cEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEh
Confidence 445665 889998764 4689999999998653 44777788899999974 5888999999999999999
Q ss_pred cccccccccChhhhhhh--cCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 81 AAYAGSACICPEFRHFI--DGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~--~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
+++.-............ .....--++..|.+|.++.| .-+|+++.. +..+....... .+...
T Consensus 202 e~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~-~~l~~~l~~~~-~~~~~------------- 266 (384)
T PRK12414 202 EVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAP-AELMDEIRKVH-QFMVF------------- 266 (384)
T ss_pred hhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecC-HHHHHHHHHHH-hheec-------------
Confidence 99864433211111110 11111236789999998755 346777654 43332221100 00000
Q ss_pred ceeccCCCcchHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEE-EEcCCcchhhhhhhh
Q 046506 158 WQITLSRRFRSLKLWFVLRNYGV-ANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCF-RVSPSAVMDKLKTKY 235 (310)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~-~~~~~~~~~~~~~~~ 235 (310)
. ...+...++...+.. ..+.+..+...+..+.+.+.|.+. ++.+. ++..+.+.| ++.+..
T Consensus 267 ---~----~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~gg~~~~~~~~~~~--------- 328 (384)
T PRK12414 267 ---S----ADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGS-RFELL-PSEGSFFMLARFRHFS--------- 328 (384)
T ss_pred ---C----CCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhC-CCeec-CCCcceEEEEcccccC---------
Confidence 0 011122222222321 234455666777888889999886 67765 445554433 443210
Q ss_pred ccccchhHHHHHHHHHHHH-HHHHhcCcEEEEEeEE--CC--EeEEEEEccCCCCCHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELL-ESINASGKAYMTHAVL--GG--IYAIRFAAGATLTEERHVMVAWTVVQE 299 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~-~~l~~~g~~~~~~~~~--~~--~~~iRis~~~~~~t~edi~~li~~l~~ 299 (310)
+ ....++. ..+.+.|.....+... .+ .+++|+++.. ++++++..++.|.+
T Consensus 329 ------~-----~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~---~~~~~~~~~~rl~~ 383 (384)
T PRK12414 329 ------D-----ESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK---DDATLVEGARRLCS 383 (384)
T ss_pred ------C-----CCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC---CHHHHHHHHHHHhh
Confidence 0 0012333 3444566544443322 12 4689999662 57888888877754
No 236
>PRK04311 selenocysteine synthase; Provisional
Probab=99.41 E-value=1.5e-11 Score=115.47 Aligned_cols=108 Identities=15% Similarity=0.132 Sum_probs=75.8
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCc--cc--ccCChHHHHHHHHHhCcEEEeec
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTA--IT--AVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~--~G--~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
.|+. +++++.+ + ..++++++++|+++| .+|+.+|.+|. +| ...|+++|+++||+||+++++|+
T Consensus 191 ~G~~---l~~v~~~--~--~t~~~dle~aI~~~T------klV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~ 257 (464)
T PRK04311 191 AGAR---LVEVGTT--N--RTHLRDYEQAINENT------ALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDL 257 (464)
T ss_pred CCcE---EEEECCC--C--CCCHHHHHHhcCccC------eEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEEC
Confidence 4554 7777764 2 467999999998764 37777888774 45 46799999999999999999999
Q ss_pred ccccccccChhh----hhhhcC--CCCCCeeeeecccccccccceEEEEEeCc
Q 046506 82 AYAGSACICPEF----RHFIDG--VEGADSFSLNAHKWFFTTLDCCCLWVKDP 128 (310)
Q Consensus 82 a~~~~~~~~~~~----~~~~~~--~~~~D~~~~~~hK~l~~p~g~g~l~v~~~ 128 (310)
++|... ....+ .+.... -.++|++++|+|||+++| ++|+++.+++
T Consensus 258 gsG~l~-~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp-~~G~i~g~~~ 308 (464)
T PRK04311 258 GSGSLV-DLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP-QAGIIVGKKE 308 (464)
T ss_pred CCcccc-cchhccCCCCCchhhHHhcCCcEEEecCcccccCC-ceEEEEEcHH
Confidence 654321 00000 000000 136999999999999999 4788877644
No 237
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.41 E-value=2.5e-11 Score=112.69 Aligned_cols=238 Identities=13% Similarity=0.045 Sum_probs=138.3
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|+. ++.+|+++++++.+|++++++++.+. +.++++..++|++|.+.+ +++|+++|++||+++++
T Consensus 133 ~~~~g~~---~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~ 203 (393)
T TIGR03538 133 ALLAGAE---PYFLNCTAENGFLPDFDAVPESVWRR------CQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIAS 203 (393)
T ss_pred HHhcCCe---EEEeeccccCCCCCCHHHHHHHHhhc------ceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEE
Confidence 3456776 99999976545789999999998654 347777889999999887 78899999999999999
Q ss_pred ecccccccccCh-hhhh---hhcCCCC----CCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccc
Q 046506 80 DAAYAGSACICP-EFRH---FIDGVEG----ADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESK 150 (310)
Q Consensus 80 D~a~~~~~~~~~-~~~~---~~~~~~~----~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~ 150 (310)
|.++........ .... ....... --+++.|..|.++.| .-+|+++. ++..+.+..... .+...
T Consensus 204 De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~-~~~l~~~~~~~~-~~~~~------ 275 (393)
T TIGR03538 204 DECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAG-DAEILKAFLRYR-TYHGC------ 275 (393)
T ss_pred CcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEec-CHHHHHHHHHHH-Hhhcc------
Confidence 999864432210 0000 0000100 115779999965544 45676654 444433321110 01000
Q ss_pred cccCCCCceeccCCCcchHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchh
Q 046506 151 QVVDYKDWQITLSRRFRSLKLWFVLRNYG-VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMD 229 (310)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~ 229 (310)
........+++..+. .+.+++..++..+..+.+.+.|.+. +.+..+..+..+.+.++ .+
T Consensus 276 --------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~--~~~~~p~gg~f~~~~~~-~~--- 335 (393)
T TIGR03538 276 --------------AMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV--LDLELPDAGFYLWPKVP-GD--- 335 (393)
T ss_pred --------------CcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh--CcccCCCeeEEEEEECC-CC---
Confidence 001112222222222 2345666667777777788888753 33333334445555543 11
Q ss_pred hhhhhhccccchhHHHHHHHHHHHHHHHHh-cCcEEEEEeEE--------CCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 230 KLKTKYENSLLSEEERINEFNRELLESINA-SGKAYMTHAVL--------GGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~--------~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
..++.+.+.+ .|.....+..+ .+.+++|+|+.. ++++++..++.|+++
T Consensus 336 --------------------~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~---~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 336 --------------------DEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA---PLEECVEAAERIRSF 392 (393)
T ss_pred --------------------HHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC---CHHHHHHHHHHHHHh
Confidence 0345666654 45444333322 135689999663 578888888887654
No 238
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.41 E-value=3.5e-11 Score=111.89 Aligned_cols=239 Identities=13% Similarity=0.064 Sum_probs=138.7
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++.+|+. ++.||+++++.+.+|+++|++.+.+. +.++++..++|++|.+.+ +++|+++|++|++++++
T Consensus 134 ~~~~g~~---~~~vp~~~~~~~~~d~~~l~~~~~~~------~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~ 204 (396)
T PRK09147 134 ALLAGAE---PYFLNCDPANNFAPDFDAVPAEVWAR------TQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIAS 204 (396)
T ss_pred HHhcCCE---EEEeccCccccCccCHHHHHHHHhhc------cEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEe
Confidence 4567776 99999986545789999999988653 346777788999999875 77788899999999999
Q ss_pred ecccccccccChhhh-hhh---cCCC--CCC--eeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccc
Q 046506 80 DAAYAGSACICPEFR-HFI---DGVE--GAD--SFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESK 150 (310)
Q Consensus 80 D~a~~~~~~~~~~~~-~~~---~~~~--~~D--~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~ 150 (310)
|.+++.......... ... .... ..| ++..|..|.++.| .-+|+++. ++..++...... .+....
T Consensus 205 De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~-~~~l~~~~~~~~-~~~~~~----- 277 (396)
T PRK09147 205 DECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAG-DAALLKKFLLYR-TYHGCA----- 277 (396)
T ss_pred eccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecC-CHHHHHHHHHHh-hhcccC-----
Confidence 999875543211000 000 0010 012 6779999976555 45676654 444443321111 111000
Q ss_pred cccCCCCceeccCCCcchHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchh
Q 046506 151 QVVDYKDWQITLSRRFRSLKLWFVLRNY-GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMD 229 (310)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~ 229 (310)
...+...+++..+ ..+.+.+..+...+..+.+.+.|.+. +.+..+..+..+.+.++..
T Consensus 278 ---------------~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~--~~~~~p~~g~f~~~~~~~~---- 336 (396)
T PRK09147 278 ---------------MPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV--LDVQLPDAGFYLWAKVPGD---- 336 (396)
T ss_pred ---------------CCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh--cCCCCCCeeEEEEEECCCC----
Confidence 0111112222222 22345566666777777777777753 3333333455555554311
Q ss_pred hhhhhhccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeEE--------CCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 230 KLKTKYENSLLSEEERINEFNRELLESIN-ASGKAYMTHAVL--------GGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--------~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
..++.+.+. +.|.....+..+ .+.+++|+++.. ++++++..++.|++.
T Consensus 337 --------------------~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~---~~~~l~~~l~rl~~~ 393 (396)
T PRK09147 337 --------------------DTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA---PLAECVEAAERIVDF 393 (396)
T ss_pred --------------------HHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC---CHHHHHHHHHHHHHH
Confidence 034556664 456544433322 125789999663 467788888877765
Q ss_pred H
Q 046506 301 L 301 (310)
Q Consensus 301 ~ 301 (310)
+
T Consensus 394 ~ 394 (396)
T PRK09147 394 C 394 (396)
T ss_pred h
Confidence 4
No 239
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.40 E-value=3.3e-11 Score=112.09 Aligned_cols=222 Identities=12% Similarity=0.066 Sum_probs=131.6
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCccccc----CChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAV----DTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~----~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++++++|.+. +.+|++....++.|.+ .++++|.++|++||+++++|.+|.+.......+.....++ .
T Consensus 168 d~~~l~~~l~~~------~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv-~ 240 (397)
T TIGR03246 168 DLAAAKALISDK------TCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGV-T 240 (397)
T ss_pred CHHHHHHHhccC------eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCC-C
Confidence 789999998643 4467777677777755 3399999999999999999999854433222111011223 3
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
.|+++ ..|.+++..-.|.+..++. .. +.+... ... .++ ++-+....+..++++.+.
T Consensus 241 pDi~t--~~K~lggG~pigav~~~~~-i~-~~~~~~----~~~------------~t~-~~~p~~~aaa~a~l~~~~--- 296 (397)
T TIGR03246 241 PDILT--SAKALGGGFPIGAMLTTTE-IA-AHLKVG----THG------------TTY-GGNPLACAVAGKVLDLVN--- 296 (397)
T ss_pred CCEEE--eehhhhCCcceeEEEEcHH-HH-HhccCC----CcC------------CCC-CCCHHHHHHHHHHHHHHh---
Confidence 67764 5788864444666665433 32 333210 000 011 111223334445555442
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCC-CeEEecC--CCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh
Q 046506 183 LRHFLRSHVNMAKLFERLVGSDK-RFEVVFP--RHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA 259 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~~-~~~v~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 259 (310)
-+++.++..++.+++.+.|+++. .+.++.. ....++.+.+.+.. ......+...|.+
T Consensus 297 ~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~--------------------~~~~~~~~~~l~~ 356 (397)
T TIGR03246 297 TPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAY--------------------QGKAKQFVNAAAE 356 (397)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCch--------------------hhHHHHHHHHHHH
Confidence 24567788888888888887652 1222211 12334444443210 1223567778888
Q ss_pred cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 260 SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 260 ~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+|.+... . +.+++|++++ ...|++||+.++++|.+.+..+
T Consensus 357 ~Gv~~~~-~---g~~~lR~~p~-~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 357 EGVIALI-A---GPNVVRFAPS-LVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred CCeEEee-c---CCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 8865432 1 3468999855 6789999999999999887653
No 240
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.40 E-value=1.8e-11 Score=113.49 Aligned_cols=242 Identities=10% Similarity=0.042 Sum_probs=142.7
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|+. ++.+|.++.+.+.+|++++++.+.+. +.+++++..+|++|.+.+ +++|+++|++||+++++
T Consensus 133 ~~~~g~~---~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~ 203 (388)
T PRK07366 133 VYLAGGQ---IYPMPLRAENDFLPVFADIPTEVLAQ------ARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVH 203 (388)
T ss_pred HHhcCCE---EEEEECCCccCCCCCHHHHHHhhccc------ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEE
Confidence 4567776 99999986555678999998877543 346777778999999877 55678899999999999
Q ss_pred ecccccccccChh-hhhhhcCCC-CCC--eeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccC
Q 046506 80 DAAYAGSACICPE-FRHFIDGVE-GAD--SFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVD 154 (310)
Q Consensus 80 D~a~~~~~~~~~~-~~~~~~~~~-~~D--~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 154 (310)
|.++.-....... ... ...+. .-+ ++..|..|.++.| .-+|+++ .++..+.........+....
T Consensus 204 De~Y~~~~~~~~~~~~~-~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v-~~~~li~~l~~~~~~~~~~~--------- 272 (388)
T PRK07366 204 DFPYVDLVFDGEVEPPS-ILQADPEKSVSIEFFTLSKSYNMGGFRIGFAI-GNAQLIQALRQVKAVVDFNQ--------- 272 (388)
T ss_pred ecchhhcccCCCCCCCC-hhhCCCCcccEEEEeecccccCCcchhheehc-CCHHHHHHHHHHHhhcccCC---------
Confidence 9998654432111 111 11111 112 4568999999654 4566665 45544432211111000000
Q ss_pred CCCceeccCCCcchHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhh
Q 046506 155 YKDWQITLSRRFRSLKLWFVLRNY--GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLK 232 (310)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~ 232 (310)
...+ ..+++..+ ....+++..++..+..+.+.+.|++. ++.+..+..+..+.+.+++.-
T Consensus 273 -----------~~~~-~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~f~~~~~~~~~------ 333 (388)
T PRK07366 273 -----------YRGI-LNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQI-GWPVPLPEATMYVWAKLPEPW------ 333 (388)
T ss_pred -----------CHHH-HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeeEEEEEECCccc------
Confidence 0000 11112222 23556777888888888899999876 665543445555555554310
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 233 TKYENSLLSEEERINEFNRELLESIN-ASGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
..-..++.+.+. +.|.....+.... +.+++|+++.. ++++++..++.|+++
T Consensus 334 --------------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~---~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 334 --------------QGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVH---DPDILEEAVERIAAF 387 (388)
T ss_pred --------------CCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecC---CHHHHHHHHHHHHHh
Confidence 000134555554 4554444333222 24789999652 588899888888764
No 241
>PLN02231 alanine transaminase
Probab=99.40 E-value=1.7e-10 Score=110.74 Aligned_cols=268 Identities=15% Similarity=0.158 Sum_probs=151.2
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|.. ++.++.++++.|.+|+++|++++++....+..+.++++...+|++|.+.+ +++|+++|++||++++.
T Consensus 233 ~~~~g~~---~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~ 309 (534)
T PLN02231 233 IALHGGT---LVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLA 309 (534)
T ss_pred HHHcCCE---EEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 3455665 89999987555789999999999875544434667777788999999865 67889999999999999
Q ss_pred eccccccccc-Chh---hhhhhc--CC--CCCCeee-eeccccccc--ccceEEEEEe--CchhHHhhhccCCccccccc
Q 046506 80 DAAYAGSACI-CPE---FRHFID--GV--EGADSFS-LNAHKWFFT--TLDCCCLWVK--DPSDLVNSLSTNPEYLKNKA 146 (310)
Q Consensus 80 D~a~~~~~~~-~~~---~~~~~~--~~--~~~D~~~-~~~hK~l~~--p~g~g~l~v~--~~~~~~~~~~~~~~y~~~~~ 146 (310)
|.++.-..+. ... ...... +. .....++ .|..|.+++ ..-+|++.+. ++.......... . ...
T Consensus 310 DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~-~-~~~-- 385 (534)
T PLN02231 310 DEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVA-S-VNL-- 385 (534)
T ss_pred EccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHHHHH-h-hhc--
Confidence 9998654432 111 111110 00 0112343 589997642 3446776553 343332221110 0 000
Q ss_pred cccccccCCCCceeccCCCcchHHHHHHHHH--hCHH-------HHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceE
Q 046506 147 TESKQVVDYKDWQITLSRRFRSLKLWFVLRN--YGVA-------NLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAV 217 (310)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~-------~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~ 217 (310)
++.......+...++- .|.. ..+++.+...++++.+.+.|.+++++.+. +|+.+.
T Consensus 386 ---------------~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~-~p~Ggf 449 (534)
T PLN02231 386 ---------------CSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCN-KAEGAM 449 (534)
T ss_pred ---------------CCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceec-CCCeee
Confidence 0000011111111110 0111 22344667888889999999988888875 566665
Q ss_pred EEE-EEc-CCcchhhhhhhhccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeEEC---CEeEEEEEccCCCCCHHHHH
Q 046506 218 VCF-RVS-PSAVMDKLKTKYENSLLSEEERINEFNRELLESIN-ASGKAYMTHAVLG---GIYAIRFAAGATLTEERHVM 291 (310)
Q Consensus 218 v~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~---~~~~iRis~~~~~~t~edi~ 291 (310)
+.| .+. +... ...++... . .-...+...+. +.|...+.+.... +...+|+++ ..++++++
T Consensus 450 ylw~~l~lp~~~---~~~~~~~~--~------~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~---~~~~e~l~ 515 (534)
T PLN02231 450 YLFPRIHLPQKA---IKAAEAAK--T------APDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTI---LPQEDKIP 515 (534)
T ss_pred EEeccccCcHHH---HHHHhhcC--C------CcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEe---CCCHHHHH
Confidence 555 222 1100 00000000 0 00123444454 4565555544443 345799985 36889999
Q ss_pred HHHHHHHHHHHHHhhc
Q 046506 292 VAWTVVQEHLEALLSA 307 (310)
Q Consensus 292 ~li~~l~~~~~~~~~~ 307 (310)
..++.|.++.+++.++
T Consensus 516 eal~RL~~~~~~~~~~ 531 (534)
T PLN02231 516 AIVSRLTEFHKSFMDE 531 (534)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999988776553
No 242
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.40 E-value=1.9e-11 Score=113.99 Aligned_cols=266 Identities=15% Similarity=0.125 Sum_probs=161.9
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC-hHHHHHHHHHhCcEEEee
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT-LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p-l~~I~~l~~~~g~~l~vD 80 (310)
+|+++|.. |+.|.++.+| .||+.+|+.+-.++.... ..+.++.++| .|..+| |++++++.|+||-.+++|
T Consensus 646 SA~Magmk---vvpV~~~~~G--~id~~dLk~kaekh~~~L---aa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlD 716 (1001)
T KOG2040|consen 646 SAAMAGMK---VVPVGCDANG--NIDMVDLKAKAEKHKDNL---AALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLD 716 (1001)
T ss_pred hHHhcCCE---EEEeeccCCC--CccHHHHHHHHHHhhhhh---heeEEecccc-cccccccHHHHHHHHHhcCCEEEec
Confidence 57899998 9999999765 999999999998876632 2444555555 577654 999999999999999999
Q ss_pred cccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCcccccccccccccc-CCCCce
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVV-DYKDWQ 159 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~-~~~~~~ 159 (310)
||-.-.....-. .+.-++|+.-.+.||+|+.|-|.|.=-+.+-- .++ ...+|+......+.... +....+
T Consensus 717 GANMNAqVGlc~-----pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIg-VK~---HLapfLP~HpVvs~~~~~~~~~~g 787 (1001)
T KOG2040|consen 717 GANMNAQVGLCR-----PGDIGADVCHLNLHKTFCIPHGGGGPGMGPIG-VKK---HLAPFLPSHPVVSPGRPEDTSPVG 787 (1001)
T ss_pred CCCccceecccC-----CccccccceeecccceeeecCCCCCCCCCccc-hhh---hccccCCCCCccCCCCCCCCCCcc
Confidence 986322211100 12236999999999999998776642211110 011 11344443321110000 000011
Q ss_pred eccCCCc---chHH-HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEE--EEEcCCcchhhhhh
Q 046506 160 ITLSRRF---RSLK-LWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVC--FRVSPSAVMDKLKT 233 (310)
Q Consensus 160 ~~~~~~~---~~~~-~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~--~~~~~~~~~~~~~~ 233 (310)
--.+-++ ..++ -|+.++.+|..|+.+-.+-..-++.|+.++|+.. ++++-....+.+. |.+.-.. +-+.
T Consensus 788 sVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h--Ykil~~~~~~~vaHEFIlD~r~---fK~~ 862 (1001)
T KOG2040|consen 788 SVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH--YKILFRGENGLVAHEFILDLRP---FKKT 862 (1001)
T ss_pred ceeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc--cceeEecCCcceeeeeeeechh---hccc
Confidence 1111112 2222 3888999999999999998999999999999974 5554322222332 3332210 0000
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 234 KYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+ +-...++.++|...| +..+...|.-.+.+=|-.+- --+.+|+|+|++++-.+-++.
T Consensus 863 a------------gieavDvAKRL~DYg-FHaPTmswPV~gtLMIEPTE-SE~k~ElDRfcdAliSIreEI 919 (1001)
T KOG2040|consen 863 A------------GIEAVDVAKRLMDYG-FHAPTMSWPVAGTLMIEPTE-SEDKAELDRFCDALISIREEI 919 (1001)
T ss_pred c------------CCcHHHHHHHHHhcc-CCCCccccccCCceEeccCc-cccHHHHHHHHHHHHHHHHHH
Confidence 0 111257888998887 44443445555666666453 356789999999987666554
No 243
>PRK08175 aminotransferase; Validated
Probab=99.39 E-value=6.4e-11 Score=110.10 Aligned_cols=248 Identities=13% Similarity=0.089 Sum_probs=143.8
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCCh---HHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTL---KPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl---~~I~~l~~~~g~~l~vD 80 (310)
+..|+. ++.+|.+++ ..++++|+++++.... .+.+++++.++|++|.+.+. ++|+++|++||+++++|
T Consensus 133 ~~~g~~---~~~v~~~~~---~~~~~~l~~~l~~~~~---~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~D 203 (395)
T PRK08175 133 VIAGAQ---VRSVPLVEG---VDFFNELERAIRESYP---KPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHD 203 (395)
T ss_pred HHcCCe---EEEEecccC---CCcHHHHHHHHhhccC---CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEe
Confidence 456776 889999864 3458999998875311 24577777788999998887 78999999999999999
Q ss_pred cccccccccChhhhhhh--cCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 81 AAYAGSACICPEFRHFI--DGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~--~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
.+++............. .+..+..+++.|..|.++.| .-+|+++ .+++.+....... .+.....
T Consensus 204 e~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~-~~~~l~~~~~~~~-~~~~~~~----------- 270 (395)
T PRK08175 204 LAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMV-GNPELVSALARIK-SYHDYGT----------- 270 (395)
T ss_pred cchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeee-CCHHHHHHHHHHH-hhcccCC-----------
Confidence 99865432111101100 11111235679999999765 3356665 4554443221110 1110000
Q ss_pred ceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhcc
Q 046506 158 WQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYEN 237 (310)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 237 (310)
. ......+..+++. ....+++..++..+..+++.+.|.+. ++.+..+..+..+.+.+...-.
T Consensus 271 -----~-~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~~g~~i~i~l~~~~~---------- 332 (395)
T PRK08175 271 -----F-TPLQVAAIAALEG-DQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVEMPKASMYVWAKIPEPYA---------- 332 (395)
T ss_pred -----C-cHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCEEEEEEEECCcccC----------
Confidence 0 0111112222221 23446666777778888899999887 6766534456666666654200
Q ss_pred ccchhHHHHHHHHHHHHHHHHhcCcEEEEEe-EE--CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 238 SLLSEEERINEFNRELLESINASGKAYMTHA-VL--GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~--~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
. .-..++...+.++.++.+.+. .+ .+.+.+|+++. .+++.+...++.|.+++.+
T Consensus 333 ----~-----~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~---~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 333 ----A-----MGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI---ENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred ----C-----CCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeC---CCHHHHHHHHHHHHHHHHh
Confidence 0 001356565554333444443 22 23468999964 4678888888888777654
No 244
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.39 E-value=4.7e-13 Score=118.41 Aligned_cols=185 Identities=16% Similarity=0.104 Sum_probs=108.9
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcc-cccC---ChHHHHHHHHHhCcEEEee
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAI-TAVD---TLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~-G~~~---pl~~I~~l~~~~g~~l~vD 80 (310)
+.|.. ++.++.+++ +++|+++|++.+........+|.+|+++..++.. |++. +|++|+++||+||++||+|
T Consensus 90 ~~G~~---~~~l~~~~~--G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmD 164 (290)
T PF01212_consen 90 LSGAK---LIPLPSDDD--GKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMD 164 (290)
T ss_dssp HTTCE---EEEEBECTG--TBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEE
T ss_pred hcCcE---EEECCCccc--CCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEe
Confidence 34555 888888753 5999999999999865522345555655444432 7765 4777889999999999999
Q ss_pred cccccccccCh--hhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCc
Q 046506 81 AAYAGSACICP--EFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDW 158 (310)
Q Consensus 81 ~a~~~~~~~~~--~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 158 (310)
||.-+...... ..++.. .++|+++++++|.++.|. |.+++-+++.+.+.+.. ..++.+.-
T Consensus 165 GARl~~a~~~~~~~~~e~~---~~~D~v~~~~tK~~g~~~--Gavl~~~~~~i~~~~~~-~k~~gg~~------------ 226 (290)
T PF01212_consen 165 GARLANAAAALGVSLAEIA---AGADSVSFGGTKNGGAPG--GAVLAGNKEFIAKARRQ-RKRLGGGM------------ 226 (290)
T ss_dssp ETTHHHHHCHHHHHHHHHH---TTSSEEEEETTSTT-SSS--EEEEEESHHHHHHHHHH-HHHHTHHH------------
T ss_pred hhhHHHhhhcccccHHHHh---hhCCEEEEEEEccccccc--ceEEEechHHHHHHHHH-HHHhccCe------------
Confidence 99865544221 112222 469999999999999885 33444556544433211 01111100
Q ss_pred eeccCCCcchHHH---HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEE
Q 046506 159 QITLSRRFRSLKL---WFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVV 218 (310)
Q Consensus 159 ~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v 218 (310)
.+ ...+.+ +........+.+....++..++++++.+.|..+ ++.+..++.+|.+
T Consensus 227 -~~----~G~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~~La~~l~~~-~~~~~~~~~tn~~ 283 (290)
T PF01212_consen 227 -RQ----AGVLAAAELYQFAALRALELWLERARHANAMAKRLAAGLEAL-GGVLPRPVETNQV 283 (290)
T ss_dssp -HH----TTHHHHHHHHHHHHHCHEECSHHHHHCHHHHHHCHHHCHHEE-CEEEETTSS-HHH
T ss_pred -ee----cceeeeechhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCcEE
Confidence 00 011111 111111223444677888999999999999987 5556656655533
No 245
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.39 E-value=1.2e-12 Score=106.31 Aligned_cols=112 Identities=26% Similarity=0.221 Sum_probs=82.2
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|.. ++.++.+.++....+.+.+++... ...+.++++++.++.+|...|+++|+++|+++|+++|+|++
T Consensus 59 ~~~~g~~---~~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a 130 (170)
T cd01494 59 AELAGAK---PVPVPVDDAGYGGLDVAILEELKA-----KPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAA 130 (170)
T ss_pred HHhcCCE---EEEeccCCCCccchhhhhhhhccc-----cCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecc
Confidence 3455665 888988765422233334443322 12367899999999999999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEe
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVK 126 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~ 126 (310)
++.+........ ....++|+++.|+|||+++ .|+|++++|
T Consensus 131 ~~~~~~~~~~~~---~~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 131 SAGGASPAPGVL---IPEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred cccccccccccc---cccccCCEEEEEcccccCC-CceEEEEeC
Confidence 987776542211 1123699999999999998 689999875
No 246
>PRK03321 putative aminotransferase; Provisional
Probab=99.38 E-value=1.2e-11 Score=113.23 Aligned_cols=229 Identities=11% Similarity=0.044 Sum_probs=139.0
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHH--hCcEEEeec
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQ--FGIWVHVDA 81 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~--~g~~l~vD~ 81 (310)
+..|.. ++.+|.+++ +.+|++++++++++. +.++++++++|++|.+.|.++|.++|++ +|+++++|+
T Consensus 116 ~~~g~~---~~~v~~~~~--~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De 184 (352)
T PRK03321 116 QVAGAT---PVQVPLTPD--HTHDLDAMAAAITDR------TRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDE 184 (352)
T ss_pred HHcCCE---EEEccCCCC--CCCCHHHHHHhhccC------CCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEec
Confidence 455665 888888753 479999999998653 3477788899999999999999999997 599999999
Q ss_pred ccccccccChhhhhhhcCC-CCCC-eeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCc
Q 046506 82 AYAGSACICPEFRHFIDGV-EGAD-SFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDW 158 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~-~~~D-~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 158 (310)
++............ .... ..-+ ++..|..|.++.| .-+|+++. ++..+.........+
T Consensus 185 ~y~~~~~~~~~~~~-~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~-~~~~~~~~~~~~~~~----------------- 245 (352)
T PRK03321 185 AYVEYVRDDDVPDG-LELVRDHPNVVVLRTFSKAYGLAGLRVGYAVG-HPEVIAALRKVAVPF----------------- 245 (352)
T ss_pred hHHHhccCcCCCcH-HHHHhhCCCEEEEecchHHhhhHHHhhhhhcC-CHHHHHHHHHhcCCC-----------------
Confidence 98654432110000 0000 1123 3456889998754 23677665 444443221111000
Q ss_pred eeccCCCcchHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhcc
Q 046506 159 QITLSRRFRSLKLWFVLRNY-GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYEN 237 (310)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 237 (310)
....+...++...+ ..+.+.+..++..+..+.+.+.|.+. ++.+. ++..+.+.+.+...
T Consensus 246 ------~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~-~~~g~~i~i~l~~~------------ 305 (352)
T PRK03321 246 ------SVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAA-GWTVP-PSQANFVWLPLGER------------ 305 (352)
T ss_pred ------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCCCEEEEeCCCC------------
Confidence 01122222222222 23444555555566667788888875 66543 34555555544221
Q ss_pred ccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 238 SLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
..++.+.|.+.|. .+.+. +...||+++ .+.+++++++++|+++.+
T Consensus 306 ------------~~~~~~~l~~~gI-~v~~~---~~~~iRi~~----~~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 306 ------------TADFAAAAAEAGV-VVRPF---AGEGVRVTI----GAPEENDAFLRAARAWRA 350 (352)
T ss_pred ------------HHHHHHHHHHCCE-EEEcc---CCCcEEEee----CCHHHHHHHHHHHHHHhc
Confidence 1356677767764 44432 234599984 468899999999998654
No 247
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.38 E-value=3.1e-11 Score=117.42 Aligned_cols=179 Identities=16% Similarity=0.091 Sum_probs=112.9
Q ss_pred ecCCCCCCEEEEecCCCCC---cccCHH-----HHHHHHHHHH-H--cCCCcEEEEEeccCCcccccCChHHHHHH-HHH
Q 046506 5 IVGIDVKNFRAIKTTKSSS---YGLSPD-----SLMAKINSDV-E--AGLIPLFLCATIGTTAITAVDTLKPLCDV-AKQ 72 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~---~~id~~-----~Le~~i~~~~-~--~~~~~~~v~~~~~~~~~G~~~pl~~I~~l-~~~ 72 (310)
+.|.. .+++++.-+.- +.++++ .++++|.+.. + ....|.-.++...+|..|.+-++++|+++ ||.
T Consensus 234 LsGa~---PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~ 310 (720)
T PRK13578 234 QAGAT---PVYLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHL 310 (720)
T ss_pred HcCCe---EEEeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhcc
Confidence 45555 77777654321 134654 4999998751 1 11234334444566778999999999998 788
Q ss_pred hCcEEEeecccccccccChhhhhhh--cCCCCCC----eeeeecccccccccceEEEEEeCch-----------hHHhhh
Q 046506 73 FGIWVHVDAAYAGSACICPEFRHFI--DGVEGAD----SFSLNAHKWFFTTLDCCCLWVKDPS-----------DLVNSL 135 (310)
Q Consensus 73 ~g~~l~vD~a~~~~~~~~~~~~~~~--~~~~~~D----~~~~~~hK~l~~p~g~g~l~v~~~~-----------~~~~~~ 135 (310)
++ .+|||.||++...+.+.++.+. ..-.++| +++-|.||++.+..+++++++++.. .+.+++
T Consensus 311 ~~-~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al 389 (720)
T PRK13578 311 CD-YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAF 389 (720)
T ss_pred CC-cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHH
Confidence 88 9999999998887666533211 1113689 9999999999999999999997642 122221
Q ss_pred ----ccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH-cCCCCeEEe
Q 046506 136 ----STNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLV-GSDKRFEVV 210 (310)
Q Consensus 136 ----~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L-~~~~~~~v~ 210 (310)
+.+|.|.- .+++-.+.+.+....-++++++..+.+..+++.| +..++++++
T Consensus 390 ~m~qSTSPsY~L------------------------mASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~ 445 (720)
T PRK13578 390 MLHASTSPFYPL------------------------FAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPF 445 (720)
T ss_pred HHHcCCChHHHH------------------------HHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeec
Confidence 11222211 1111111222222233566777888888899888 667888877
Q ss_pred c
Q 046506 211 F 211 (310)
Q Consensus 211 ~ 211 (310)
.
T Consensus 446 ~ 446 (720)
T PRK13578 446 I 446 (720)
T ss_pred c
Confidence 4
No 248
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.38 E-value=1.4e-11 Score=112.34 Aligned_cols=204 Identities=17% Similarity=0.057 Sum_probs=115.2
Q ss_pred cEEEEEeccCCccccc---CChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeeeeecccccccccceE
Q 046506 45 PLFLCATIGTTAITAV---DTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCC 121 (310)
Q Consensus 45 ~~~v~~~~~~~~~G~~---~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g 121 (310)
+.+|+++ +++++|.+ .||++|+++|++||++++||.||+.+......... .... ++|+++.+++|++.++. .|
T Consensus 137 ~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~-~~~~-~~divv~s~SKalaG~r-~G 212 (346)
T TIGR03576 137 TSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPP-ALDL-GADLVVTSTDKLMDGPR-GG 212 (346)
T ss_pred ceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCC-HHHc-CCcEEEeccchhccccc-eE
Confidence 3455554 57889998 78999999999999999999999876432111111 1111 37899999999876665 35
Q ss_pred EEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Q 046506 122 CLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLV 201 (310)
Q Consensus 122 ~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L 201 (310)
+++ .++..+........+|..... ++.+.++.++++.+ ..+.+.+...++.+.+.+.+
T Consensus 213 ~v~-~~~~li~~l~~~~~~~~~s~~------------------~~~~~aa~~aL~~~---~~~~~~~~l~~r~~~~~~~l 270 (346)
T TIGR03576 213 LLA-GRKELVDKIKSVGEQFGLEAQ------------------APLLAAVVRALEEF---ELSRIRDAFKRKEEVYLRLF 270 (346)
T ss_pred EEE-eCHHHHHHHHHhhcCcccCcc------------------HHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHH
Confidence 554 455454333233333332110 11223333444332 23455566666777777777
Q ss_pred cCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE-CCEeEEEEEc
Q 046506 202 GSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVL-GGIYAIRFAA 280 (310)
Q Consensus 202 ~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~~~~~iRis~ 280 (310)
.+ +.+. ++..+.+.+.+.+.+ + .+...+.|.+.|........+ ...+++|||+
T Consensus 271 ~~---~~~~-~~~~~f~~~~~~~~~---------------~-------~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~ 324 (346)
T TIGR03576 271 DK---LNVE-RTPTGFVIKGVEEEK---------------L-------IEIGLDLLRNYGIITITAVGMPGASKTLRFDL 324 (346)
T ss_pred Hh---CCCC-cCCCeEEEEeCCCCC---------------H-------HHHHHHHHHhCCEEEeCCcccCCCCCeEEEEE
Confidence 64 3333 334555555544311 0 023344455566544432222 2357999996
Q ss_pred cCCCCCHHHHHHHHHHHHHH
Q 046506 281 GATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 281 ~~~~~t~edi~~li~~l~~~ 300 (310)
..+.-+..+.+.++++|++-
T Consensus 325 ~~~~~~~~~~~~~~~al~~~ 344 (346)
T TIGR03576 325 AAKDAERIGDDYLVEAVKDS 344 (346)
T ss_pred ecChHHhcCHHHHHHHHHhc
Confidence 64321233899999999764
No 249
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.38 E-value=3.5e-11 Score=112.88 Aligned_cols=185 Identities=10% Similarity=0.079 Sum_probs=113.1
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
..|.. ++++++++. ++.+|+++++++|++++ .+|++++. .|...++++|.++|++||+++++|+||+
T Consensus 130 ~~G~~---pv~vdvd~~-~~~id~~~le~~i~~~t------kaVi~~~~---~G~p~dl~~I~~la~~~gi~vIeDaa~a 196 (438)
T PRK15407 130 QNGLV---PVFVDVELP-TYNIDASLLEAAVSPKT------KAIMIAHT---LGNPFDLAAVKAFCDKHNLWLIEDNCDA 196 (438)
T ss_pred HcCCE---EEEEecCCC-cCCcCHHHHHHHcCcCC------eEEEEeCC---CCChhhHHHHHHHHHHCCCEEEEECccc
Confidence 34555 788888753 57899999999997643 35666653 5778899999999999999999999998
Q ss_pred cccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCcccccc------c-------ccc-c
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNK------A-------TES-K 150 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~------~-------~~~-~ 150 (310)
.|....... ...++.+-++++...|.+.+.. .|+++++++.......... .+-... . ... .
T Consensus 197 ~G~~~~g~~---~G~~gd~~~fSf~~~k~~~~ge-GG~l~t~d~~l~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~ 271 (438)
T PRK15407 197 LGSTYDGRM---TGTFGDIATLSFYPAHHITMGE-GGAVFTNDPLLKKIIESFR-DWGRDCWCAPGCDNTCGKRFGWQLG 271 (438)
T ss_pred hhhhcCCee---eeccCceEEEeCCCCCCccccC-ceEEEECCHHHHHHHHHHH-HhCcccccccccccccccccccccc
Confidence 776543211 1122334455566667776543 4788888775433221110 100000 0 000 0
Q ss_pred c-ccCC-CCce-eccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCe
Q 046506 151 Q-VVDY-KDWQ-ITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRF 207 (310)
Q Consensus 151 ~-~~~~-~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~ 207 (310)
. .+.+ ..+. ...|..+..-.+.+++.......++++.++..++++++.+.|.++++.
T Consensus 272 ~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~~ 331 (438)
T PRK15407 272 ELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLEDF 331 (438)
T ss_pred cccccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 0 0000 0000 012333444455566655556788999999999999999999988753
No 250
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.38 E-value=5.7e-11 Score=109.36 Aligned_cols=230 Identities=13% Similarity=0.036 Sum_probs=138.6
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+..|+. ++.++.++ ++.+|++++++++.+.. +.+++++..+|++|.+.+.+++.++|+.+++++++|.+|
T Consensus 130 ~~~g~~---~~~~~~~~--~~~~d~~~l~~~~~~~~-----~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y 199 (368)
T PRK03317 130 RGTHTE---WVEGPRAA--DFTLDVDAAVAAIAEHR-----PDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAY 199 (368)
T ss_pred HhcCCe---eEEcccCC--CCCCCHHHHHHHHhccC-----CCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCc
Confidence 344554 66666553 46899999999997431 336677788899999999999999999999999999999
Q ss_pred ccccccC-hhhhhhhcCCCCCC-eeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 84 AGSACIC-PEFRHFIDGVEGAD-SFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 84 ~~~~~~~-~~~~~~~~~~~~~D-~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
+...... ......... .-+ ++..|..|.++.| .-+|+++. ++..+.........|.
T Consensus 200 ~~~~~~~~~~~~~~~~~--~~~~i~~~SfSK~~g~~GlRiG~~~~-~~~~~~~l~~~~~~~~------------------ 258 (368)
T PRK03317 200 AEFRRSGTPSALTLLPE--YPRLVVSRTMSKAFAFAGGRLGYLAA-APAVVDALRLVRLPYH------------------ 258 (368)
T ss_pred hhhcccCCcCHHHHHHh--CCCEEEEEechhhhccchhhhhhhhC-CHHHHHHHHhcCCCCC------------------
Confidence 7543211 111111111 123 4556999998754 23466654 4444322211111110
Q ss_pred ccCCCcchHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhcccc
Q 046506 161 TLSRRFRSLKLWFVLRNYG-VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSL 239 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 239 (310)
...+...++...+. .+.+.+.+++..+..+.+.+.|++. ++.+. ++..+.+.|...+.
T Consensus 259 -----~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~-------------- 317 (368)
T PRK03317 259 -----LSAVTQAAARAALRHADELLASVAALRAERDRVVAWLREL-GLRVA-PSDANFVLFGRFAD-------------- 317 (368)
T ss_pred -----CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEeC-CCCCcEEEEeccCC--------------
Confidence 01122222222221 2344555566677777888888876 77765 45555544421111
Q ss_pred chhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 240 LSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 240 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
..++.+.+.++|.+ +.+. ...+++|+++. +.+++++++++|+++..
T Consensus 318 ----------~~~~~~~l~~~Gv~-v~~~--~~~~~iRi~~~----~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 318 ----------RHAVWQGLLDRGVL-IRDV--GIPGWLRVTIG----TPEENDAFLAALAEVLA 363 (368)
T ss_pred ----------HHHHHHHHHHCCEE-EEeC--CCCCeEEEecC----CHHHHHHHHHHHHHHHH
Confidence 13566777777754 4332 23568999943 56899999999998874
No 251
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.38 E-value=6.5e-11 Score=109.82 Aligned_cols=221 Identities=12% Similarity=0.050 Sum_probs=133.0
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
-|+++|++.+.+. ..+|++....++.|.+.| +++|.++|++||+++++|.+|.+.......+.....++
T Consensus 167 ~d~~~l~~~l~~~------~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv- 239 (395)
T PRK03715 167 NDIASVEKLITDK------TVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGI- 239 (395)
T ss_pred chHHHHHHHcCCC------ceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCC-
Confidence 4688999888543 447888888888898887 99999999999999999999975433332211111233
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
..|++++ .|.+++....|.+..+++ .. .+ .+.+... ++ ++.+..+.+..++++.+..
T Consensus 240 ~PDi~t~--gK~lg~G~p~~av~~~~~-i~--~~--~~~~~~~--------------T~-~g~pl~~aaala~L~~l~~- 296 (395)
T PRK03715 240 EPDIMTL--GKGIGGGVPLAALLAKAE-VA--VF--EAGDQGG--------------TY-NGNPLMTAVGVAVISQLLA- 296 (395)
T ss_pred CCceeee--hhhhhCCcceEEEEEccc-cc--cc--cCCCcCC--------------CC-CCCHHHHHHHHHHHHHHHh-
Confidence 3788766 499987555777766554 21 11 1111111 11 1222334445556655532
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC---CCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSD---KRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESIN 258 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~---~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 258 (310)
++++++..++.++|+++|+++ .++.-+. -...++.+.+.... .....+....+.
T Consensus 297 --~~l~~~~~~~g~~l~~~L~~l~~~~~i~~vr-G~Glm~~i~l~~~~--------------------~~~~~~~~~~~~ 353 (395)
T PRK03715 297 --PGFLEGVRARGEYLKEKLLELSEERGLEGER-GEGLLRALLLGKDI--------------------GPQIVEKARDMQ 353 (395)
T ss_pred --ccHHHHHHHHHHHHHHHHHHHhhcCCcCeEE-cceeEEEEEecCch--------------------HHHHHHHHHhcc
Confidence 456778888888888888753 1232121 12445556554310 011112222333
Q ss_pred hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 259 ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 259 ~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
++|.+ +.+. +..++|++++ ...|++||+.++++|++.+..+
T Consensus 354 ~~Gi~-~~~~---~~~~lR~~p~-l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 354 PDGLL-LNAP---RPNLLRFMPA-LNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred CCCEE-Eeec---CCCEEEEeCC-cccCHHHHHHHHHHHHHHHHhh
Confidence 44643 3221 2468999966 6899999999999999988764
No 252
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.38 E-value=6.3e-11 Score=107.59 Aligned_cols=229 Identities=12% Similarity=0.059 Sum_probs=138.3
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEE
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVH 78 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~ 78 (310)
+++..|+. ++.||.++. .+|++.+++ . .+.+++++.++|++|.+.+ +++|+++|+++|++++
T Consensus 95 ~~~~~G~~---v~~vp~~~~---~~~~~~l~~----~-----~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI 159 (332)
T PRK06425 95 YAFTHGIR---ISALPFNLI---NNNPEILNN----Y-----NFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLF 159 (332)
T ss_pred HHHHcCCe---EEEEeCCcc---cCcHHHHhh----c-----CCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEE
Confidence 45677887 999999752 456555442 1 1446777789999999877 5667788899999999
Q ss_pred eecccccccccC-hhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 79 VDAAYAGSACIC-PEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 79 vD~a~~~~~~~~-~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
+|.+++-..... +......... .--++..|+.|.++.| .-+|+++. +++.++.......++.
T Consensus 160 ~DE~Y~~~~~~~~~~~~~~~~~~-~~vi~~~SfSK~~~l~GlRiGy~v~-~~~li~~l~~~~~~~~-------------- 223 (332)
T PRK06425 160 IDEAFIDFVPNRAEEDVLLNRSY-GNVIIGRSLTKILGIPSLRIGYIAT-DDYNMKISRKITEPWS-------------- 223 (332)
T ss_pred EecchhccccccchhHHHHhccC-CCEEEEeecHHhcCCchhhheeeec-CHHHHHHHHHcCCCCc--------------
Confidence 999986443211 0111111110 1124557999999855 33566654 4544433222111110
Q ss_pred CceeccCCCcchHHHHHHHHHhCHHH-HHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhh
Q 046506 157 DWQITLSRRFRSLKLWFVLRNYGVAN-LRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
. .... ...+.....+. .++..+...+..+++.+.|.+. ++.+..++..+.+.+.++..
T Consensus 224 ---~------~~~~-~~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~g~f~~~~~~~~---------- 282 (332)
T PRK06425 224 ---V------CDPA-IDFIRSIDLDYVAKHSLDIMENERSYLINNLEAM-GFRAAGDPSANFITFMIPDA---------- 282 (332)
T ss_pred ---c------CHHH-HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCceEEEEEcCCH----------
Confidence 0 0111 11222222222 3566777778888899999887 78776566777776665421
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
.++.+.+.+.|.....+..+. +.+++|+|+. ++++.++|+++|++++
T Consensus 283 ---------------~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 283 ---------------HDFYSYLLKNGILVRLLDDYECLGEQYIRIAIR----RRSFNIKLVNALRNFL 331 (332)
T ss_pred ---------------HHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHHh
Confidence 356677777775444433332 2469999944 4789999999998764
No 253
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.38 E-value=7.4e-11 Score=108.93 Aligned_cols=213 Identities=12% Similarity=0.058 Sum_probs=125.8
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccC----ChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVD----TLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~----pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++|++.+++. +.+|+++..++++|... ++++|.++|++||+++++|++++..............++ .
T Consensus 159 d~~~l~~~~~~~------~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~-~ 231 (379)
T TIGR00707 159 DIESLKKAIDDE------TAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGI-E 231 (379)
T ss_pred CHHHHHHHhhhC------eeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCC-C
Confidence 799999998754 34677777777777543 389999999999999999999964322111000001111 2
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
.|++ +.+|+++....+|+++.+ ++.+ +.+... .+ .. .+ ++-++...++.++++.+..
T Consensus 232 ~d~~--t~sK~~~~G~riG~~~~~-~~~~-~~~~~~-~~-~~--------------~~-~~~~~~~~aa~aaL~~~~~-- 288 (379)
T TIGR00707 232 PDII--TLAKGLGGGVPIGATLAK-EEVA-EAFTPG-DH-GS--------------TF-GGNPLACAAALAVLEVIEK-- 288 (379)
T ss_pred CCEE--EEcccccCCcccEEEEEc-HHHH-hhhcCC-CC-CC--------------CC-CCCHHHHHHHHHHHHHHHh--
Confidence 4655 458999965668887664 4333 322110 00 00 00 1111233444555554422
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCeEEe-c--CCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh
Q 046506 183 LRHFLRSHVNMAKLFERLVGSDKRFEVV-F--PRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA 259 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~~~~~v~-~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 259 (310)
.++.++..++.+++++.|.++ +.... . ++..+++.+.+.+. ..++.+.|.+
T Consensus 289 -~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~g~~~~~~~~~~------------------------~~~~~~~l~~ 342 (379)
T TIGR00707 289 -ERLLENVKEKGDYFKERLEEL-GKNYPNKEVRGKGLMLGIELEAP------------------------CKDIVKKALE 342 (379)
T ss_pred -hhHHHHHHHHHHHHHHHHHHH-HhhCCCCccccCceEEEEEecCc------------------------HHHHHHHHHH
Confidence 245566777777787777654 22111 1 12345566655431 1467777878
Q ss_pred cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 260 SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 260 ~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
.|.. +.+. +.+++|++++ ...+++++++++++|+++
T Consensus 343 ~Gv~-v~~~---~~~~lRi~~~-~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 343 KGLL-VNCA---GPKVLRFLPP-LIITKEEIDEAVSALEEA 378 (379)
T ss_pred CCcE-EeeC---CCCEEEEECC-CcCCHHHHHHHHHHHHHh
Confidence 8754 4332 3468999955 568899999999999875
No 254
>PRK06855 aminotransferase; Validated
Probab=99.37 E-value=1.6e-10 Score=108.73 Aligned_cols=265 Identities=10% Similarity=0.055 Sum_probs=143.8
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEeeccccccccc
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVDAAYAGSACI 89 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD~a~~~~~~~ 89 (310)
++.+|+++++.+.+|+++|++++.... .+.++++...+|++|.+.+ +++|+++|++||++++.|.+++...+.
T Consensus 144 ~v~v~~~~~~~~~~d~~~l~~~~~~~~----~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~ 219 (433)
T PRK06855 144 PVTYRLDPENNWYPDLDDLENKVKYNP----SIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYN 219 (433)
T ss_pred EEEEecccccCCCCCHHHHHHHHhcCC----CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccC
Confidence 778888764456899999999996421 1346677788999999877 567888899999999999998654332
Q ss_pred ChhhhhhhcCCCC-CCeeeeecccccccc-cceEEEEEeCc---hhHHhhhccCCccccccccccccccCCCCceeccCC
Q 046506 90 CPEFRHFIDGVEG-ADSFSLNAHKWFFTT-LDCCCLWVKDP---SDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSR 164 (310)
Q Consensus 90 ~~~~~~~~~~~~~-~D~~~~~~hK~l~~p-~g~g~l~v~~~---~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 164 (310)
.........-... --++..|..|.++.| .-+|++.+.+. ..+...+.....+.... .+
T Consensus 220 ~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~~~----------------~~- 282 (433)
T PRK06855 220 GKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYINSILNAKMIE----------------VC- 282 (433)
T ss_pred CCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHHHHHHHHHHHhhccc----------------cC-
Confidence 2111111000011 126778999999744 55777776321 11111110000000000 00
Q ss_pred CcchHHHHHHHHHhC----HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEE-EEEEcCCcchhhhhhhhcccc
Q 046506 165 RFRSLKLWFVLRNYG----VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVV-CFRVSPSAVMDKLKTKYENSL 239 (310)
Q Consensus 165 ~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v-~~~~~~~~~~~~~~~~~~~~~ 239 (310)
...+...++..++. ...+++..+...++.+.+.+.|.+++++.+. +|..+.. .+.+++. .... ..+....+
T Consensus 283 -~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~-~p~gg~~~w~~l~~~-~~~~-~~~~~~~~ 358 (433)
T PRK06855 283 -STTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVN-RTNGAFYMTVVFEDG-VLNN-KQSLPIEN 358 (433)
T ss_pred -CChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeecc-CCCeeEEEeeccccc-cccc-cccCCcch
Confidence 01122223333332 2346677777788888899999887787654 5555444 3444321 0000 00000000
Q ss_pred chhHHHHHH-------HHHHHHHH-HHhcCcEEEEEeEEC-CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 240 LSEEERINE-------FNRELLES-INASGKAYMTHAVLG-GIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 240 ~~~~~~~~~-------~~~~l~~~-l~~~g~~~~~~~~~~-~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
....+.... ...++... +.+.|....++.... ....+|+|+.+ .++++++..++.|++++.+.
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~--~~~~~i~~~~~~l~~~~~~~ 430 (433)
T PRK06855 359 PEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLE--RDEEKFEWIYQTLAEKIEEY 430 (433)
T ss_pred hhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECC--CcHHHHHHHHHHHHHHHHHH
Confidence 000000000 01233333 445565455443332 23459999774 57899999999999988764
No 255
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.37 E-value=2.1e-10 Score=106.95 Aligned_cols=254 Identities=14% Similarity=0.110 Sum_probs=143.2
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHc-CCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEE
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEA-GLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVH 78 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~-~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~ 78 (310)
+...|.. ++.||.+.++.+.+|++++.+.+.+..+. ..++.+++.+.++|++|.+.+ +++|+++|++||++++
T Consensus 136 ~~~~g~~---~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II 212 (403)
T PRK08636 136 FILAGGN---VHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYII 212 (403)
T ss_pred HHhcCCE---EEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEE
Confidence 4556776 88998864334689988765554432221 123557777777899999877 5678889999999999
Q ss_pred eecccccccccChhhhhhhcCCCC-CC--eeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccC
Q 046506 79 VDAAYAGSACICPEFRHFIDGVEG-AD--SFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVD 154 (310)
Q Consensus 79 vD~a~~~~~~~~~~~~~~~~~~~~-~D--~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 154 (310)
+|.+++........... ...+.. .| +++.|..|.++.| .-+|+++ .++..+...... ..+....
T Consensus 213 ~De~Y~~l~~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv-~~~~li~~~~~~-~~~~~~~--------- 280 (403)
T PRK08636 213 SDIAYADITFDGYKTPS-ILEVEGAKDVAVESYTLSKSYNMAGWRVGFVV-GNKKLVGALKKI-KSWLDYG--------- 280 (403)
T ss_pred EeccchhhccCCCCCCC-hhcCCCccccEEEEEecccccCCccceeeeee-CCHHHHHHHHHH-HHHhccc---------
Confidence 99998654332111111 111111 12 3467899999644 5566664 455443322110 0110000
Q ss_pred CCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhh
Q 046506 155 YKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~ 234 (310)
.+. .....+..+++ -....++++.+...++.+.+.+.|++. ++.+..+.....+.+.+++..
T Consensus 281 -------~~~-~~q~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~p~~g~~~~~~l~~~~-------- 342 (403)
T PRK08636 281 -------MFT-PIQVAATIALD-GDQSCVEEIRETYRKRRDVLIESFANA-GWELQKPRASMFVWAKIPEPA-------- 342 (403)
T ss_pred -------CCh-HHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCcceEEEEECCCcc--------
Confidence 000 01111111222 123456667777788888888999876 676654445555666654320
Q ss_pred hccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESIN-ASGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
. ..-..++...+. +.|.....+..+. +.+++|+++. .++++++..++.|+++++.
T Consensus 343 -------~----~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 343 -------R----HLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI---ENENRIRQAARNIKKFLKE 400 (403)
T ss_pred -------C----CCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec---CCHHHHHHHHHHHHHHHHh
Confidence 0 000134555544 3454443333222 3579999965 4688889888888887765
No 256
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.37 E-value=1.5e-10 Score=106.93 Aligned_cols=235 Identities=10% Similarity=0.008 Sum_probs=147.0
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
..+.+++.|.+.......+..+++.......|.+.| ++++.++|++||+++++|..|.+.......+.--..++ -
T Consensus 205 ~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv-~ 283 (447)
T COG0160 205 ALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGV-E 283 (447)
T ss_pred HHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCC-C
Confidence 445567766665544556788888888888898877 88999999999999999999988776554332112233 3
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
.|+++++ |.+++....|.+..+.. .. +.. |.-... + -+|-+..+.+..++|+.+..
T Consensus 284 PDivt~a--K~ig~G~Pl~avv~r~e-i~-~~~---~g~~~~--------------T-f~GNpva~Aaa~AvL~vie~-- 339 (447)
T COG0160 284 PDIVTLA--KSLGGGLPLSAVVGRAE-IM-DWP---PGGHGG--------------T-FGGNPVACAAALAVLDVIEE-- 339 (447)
T ss_pred CCEEEec--ccccCCCceeEEeccHH-hc-ccC---CcccCC--------------C-CCcCHHHHHHHHHHHHHHHH--
Confidence 7888874 88887666777766544 21 211 110000 1 11212233444455554433
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC-CCeEEecCCCc--eEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh
Q 046506 183 LRHFLRSHVNMAKLFERLVGSD-KRFEVVFPRHF--AVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA 259 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 259 (310)
+.+.++..++-++++++|.++ ..+..++..+. -.+.+-+....- +..+ -..+...+..++.+
T Consensus 340 -e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~-----------t~~p---~~~~~~~i~~~~~~ 404 (447)
T COG0160 340 -ENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRD-----------TKEP---DAELAAKIVARAFE 404 (447)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCC-----------CCCC---CHHHHHHHHHHHHH
Confidence 367777888888888888764 34445554431 223333331100 0000 03556788889999
Q ss_pred cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 260 SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 260 ~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+|.+..... ...++|||.+. .-.++|++|.+++.|.+.+.+.
T Consensus 405 ~Glil~~~G--~~~nviRi~PP-L~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 405 RGLLLLTCG--PHGNVLRILPP-LTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred cCCEEeccC--CCCcEEEEeCC-cccCHHHHHHHHHHHHHHHHhh
Confidence 997554432 13678999966 5689999999999999888653
No 257
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.36 E-value=4.2e-11 Score=119.30 Aligned_cols=210 Identities=16% Similarity=0.140 Sum_probs=134.4
Q ss_pred EEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeeeeecccccccc-----cceE
Q 046506 47 FLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-----LDCC 121 (310)
Q Consensus 47 ~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-----~g~g 121 (310)
..++...++..|.+.++++|++++|++|++++|+.-..+..+.-+- .. -++|+++ +.||.|+.| .+.|
T Consensus 196 ~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~P-----ge-~GaDi~v-g~~q~fg~p~g~GGP~aG 268 (939)
T TIGR00461 196 FGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPP-----GH-YGADIVL-GSSQRFGVPMGYGGPHAA 268 (939)
T ss_pred EEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCH-----HH-cCCcEEe-eCCCccCCCCCCCCCcee
Confidence 3555566677899999999999999999999996544333332221 11 2699994 445545543 2377
Q ss_pred EEEEeCchhHHhhhccCCccccccccccccccCCCCceecc----CCC--cc-------h-HHH--HHHHHHhCHHHHHH
Q 046506 122 CLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITL----SRR--FR-------S-LKL--WFVLRNYGVANLRH 185 (310)
Q Consensus 122 ~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~----~~~--~~-------~-~~~--~~~l~~~~~~~~~~ 185 (310)
++.+++. +.+.+ |+.+-+...+..+-+.++. ++|. -|| +. + +++ +..+..+|.+|+.+
T Consensus 269 ~~a~~~~--l~r~l---PgrivG~s~D~~G~~~~~l-~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~ 342 (939)
T TIGR00461 269 FFAVKDE--YNRKM---PGRIVGVSKDALGNTALRL-ALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKN 342 (939)
T ss_pred eeeecHh--hHhhC---CCCceeEEecCCCCcccee-ecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHH
Confidence 8888765 23333 3333332221111111111 1111 122 11 1 122 22356689999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEE
Q 046506 186 FLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYM 265 (310)
Q Consensus 186 ~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 265 (310)
+.++...++.++.+.|.+ .|+++..++-++.+.+.+...+ .+++.+++.++|.. +
T Consensus 343 iA~~~~~~a~~l~~~L~~-~G~~~~~~~fF~~~~v~~~~~~-----------------------~~~i~~~~~~~gi~-l 397 (939)
T TIGR00461 343 IARRIHSLTSILANGLEN-DPHELINKTWFDTLTVKVGNGI-----------------------SSELLKAAEEFNIN-L 397 (939)
T ss_pred HHHHHHHHHHHHHHHHHh-CCCcccCCCccceEEEEeCCCC-----------------------HHHHHHHHHHCCCe-e
Confidence 999999999999999998 6999988776778888774211 14677778788764 2
Q ss_pred EEeEECCEeEEEEEccCCCCCHHHHHHHHHHHH
Q 046506 266 THAVLGGIYAIRFAAGATLTEERHVMVAWTVVQ 298 (310)
Q Consensus 266 ~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~ 298 (310)
.. ...+.+++|++- .+|++||+.|++++.
T Consensus 398 ~~---~~~~~i~~s~~E-~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 398 RA---VDTTTVGIALDE-TTTKADVENLLKVFD 426 (939)
T ss_pred ee---cCCCEEEEEeec-CCCHHHHHHHHHHhc
Confidence 22 223579999774 799999999999995
No 258
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.36 E-value=2e-11 Score=114.45 Aligned_cols=107 Identities=14% Similarity=0.142 Sum_probs=75.1
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCc--cc--ccCChHHHHHHHHHhCcEEEeec
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTA--IT--AVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~--~G--~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
.|+. +++++.+ + ..++++++++|+++| .+|+.++.+|. .| .+.|+++|+++||+||++++||+
T Consensus 186 ~G~~---~~~v~~~--~--~~~l~dle~aI~~~T------~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~ 252 (454)
T TIGR00474 186 SGAK---LVEVGTT--N--RTHLKDYEDAITENT------ALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDL 252 (454)
T ss_pred cCCE---EEEeCCC--C--CCCHHHHHHhcCcCC------EEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEEC
Confidence 4555 7777664 2 468999999998764 36677777664 56 47899999999999999999998
Q ss_pred cccccc------ccC-hhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCc
Q 046506 82 AYAGSA------CIC-PEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDP 128 (310)
Q Consensus 82 a~~~~~------~~~-~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~ 128 (310)
+.|... ++. +...... -.++|++++|+|||+++|. +|+++.+++
T Consensus 253 ~sG~l~~~~~~gl~~~p~~~~~~--~~GaDiv~fSg~K~LgGp~-~G~i~g~~~ 303 (454)
T TIGR00474 253 GSGSLVDLSRYGLPDEPTVQEVI--AAGVDLVTFSGDKLLGGPQ-AGIIVGKKE 303 (454)
T ss_pred CCcccccchhccCCCCcccccHh--HcCCCEEEecCccccCCCe-EEEEEECHH
Confidence 643310 000 0000001 1369999999999999994 787877644
No 259
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.36 E-value=1.6e-11 Score=110.35 Aligned_cols=233 Identities=12% Similarity=0.015 Sum_probs=151.0
Q ss_pred CHHHHHHHHHHHHHcCC-------CcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhh--
Q 046506 27 SPDSLMAKINSDVEAGL-------IPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI-- 97 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~-------~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~-- 97 (310)
|+++||+.|++....+. +..+||.....++-|++.++.++.+++++|.+.+++|+||+.++..-. .++.+
T Consensus 252 dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~t-Grgvce~ 330 (519)
T KOG1357|consen 252 DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGAT-GRGVCEY 330 (519)
T ss_pred CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCC-Ccceeec
Confidence 56899999988665431 235677788889999999999999999999999999999988876321 11111
Q ss_pred --cCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCc-chHHHHHH
Q 046506 98 --DGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRF-RSLKLWFV 174 (310)
Q Consensus 98 --~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 174 (310)
.+-+.+|.+.....|.|++ +|.....++.++ +.....+++... ..+.++ -+-....+
T Consensus 331 ~g~d~~dvDImMGtftKSfga---~GGyiagsk~li-d~lrt~s~~~~y----------------at~~sppvaqq~~ss 390 (519)
T KOG1357|consen 331 FGVDPEDVDIMMGTFTKSFGA---AGGYIAGSKELI-DYLRTPSPSALY----------------ATSLSPPVAQQILTS 390 (519)
T ss_pred cCCCchhheeecceehhhccc---ccceecCcHHHH-hhhccCCCceee----------------cccCChHHHHHHHHH
Confidence 0113589999999998874 455555555444 332222111111 111111 11122233
Q ss_pred HHHh----CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHH
Q 046506 175 LRNY----GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFN 250 (310)
Q Consensus 175 l~~~----~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (310)
++.+ +.+.-++..+++.+++.+++..|... +|.+++....+++.+-+-++.. .
T Consensus 391 l~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~-gfivyG~~dSpVvplll~~~~k----------------------~ 447 (519)
T KOG1357|consen 391 VKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM-GFIVYGNNDSPVVPLLLYGPAK----------------------I 447 (519)
T ss_pred HHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC-cEEEecCCCCCcceeeecCccc----------------------c
Confidence 3332 34567889999999999999999976 9999987666666544444321 1
Q ss_pred HHHHHHHHhcCcEEEEEeE---ECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 251 RELLESINASGKAYMTHAV---LGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 251 ~~l~~~l~~~g~~~~~~~~---~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.++...|.+.+...+.... +--..+.|++.+ .+++.|+++++++++.......
T Consensus 448 ~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~S-a~ht~e~ld~~l~~i~~~g~~~ 503 (519)
T KOG1357|consen 448 VAFSREMLERNIGVVVVGFPATPLLESRARFCLS-ASHTKEDLDRALEVIDRVGDED 503 (519)
T ss_pred cHHHHHHHhcCceEEEEeCCCchHHHhHHHhhhc-ccccHHHHHHHHHHHhhhchhh
Confidence 2455556565543333222 222567899956 5789999999999999887543
No 260
>PRK09105 putative aminotransferase; Provisional
Probab=99.36 E-value=7.2e-11 Score=108.76 Aligned_cols=229 Identities=10% Similarity=0.048 Sum_probs=140.9
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHH--hCcEEEe
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQ--FGIWVHV 79 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~--~g~~l~v 79 (310)
+++..|+. ++.+|.++ ++.+|++++++. .+. +.++++.+++|++|.+.+.++|.++++. +|+++++
T Consensus 135 ~~~~~g~~---~~~v~~~~--~~~~d~~~l~~~-~~~------~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIv 202 (370)
T PRK09105 135 AADAQGAP---VAKVPLRA--DGAHDVKAMLAA-DPN------AGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLV 202 (370)
T ss_pred HHHHcCCe---EEEecCCC--CCCCCHHHHHhc-CCC------CCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEE
Confidence 34567877 89999876 357999999876 222 3377788899999999998888887754 4899999
Q ss_pred ecccccccccChhhhhhhcCCCCCCeee-eecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 80 DAAYAGSACICPEFRHFIDGVEGADSFS-LNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~~~D~~~-~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
|.++..+.. .+....... .+.++++ .|..|+++.| .-+|+++. ++..+....... ...
T Consensus 203 DEaY~~f~~-~~s~~~~~~--~~~~vi~~~SfSK~~g~~GlRiG~~v~-~~~~i~~l~~~~-----~~~----------- 262 (370)
T PRK09105 203 DEAYIHFSD-APSVVDLVA--QRKDLIVLRTFSKLYGMAGMRLGLAAA-RPDLLAKLARFG-----HNP----------- 262 (370)
T ss_pred ECchHHhcc-CcchHHHHh--hCCCEEEEecccHhhcCCccceeeeec-CHHHHHHHHhcC-----CCC-----------
Confidence 999853221 111111111 1245555 5778988644 23777765 444443321110 000
Q ss_pred ceeccCCCcchHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhc
Q 046506 158 WQITLSRRFRSLKLWFVLRNYG-VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~ 236 (310)
.......++...+. .+.+++..++..++.+.+.+.|.+. ++.+. ++..+.+.+.+...
T Consensus 263 --------~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~~~f~~~~~~~~----------- 321 (370)
T PRK09105 263 --------LPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK-GYKCT-PSQANCFMVDVKRP----------- 321 (370)
T ss_pred --------cCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCcC-CCCCcEEEEeCCCC-----------
Confidence 01122223333332 3456777788888889999999886 77765 45666554443211
Q ss_pred cccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 237 NSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
..++.+.|.++|.. +........+++|+++. +++++++++++|+++.
T Consensus 322 -------------~~~l~~~L~~~gI~-v~~~~~~~~~~~Ris~~----~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 322 -------------AKAVADAMAKQGVF-IGRSWPIWPNWVRVTVG----SEEEMAAFRSAFAKVM 368 (370)
T ss_pred -------------HHHHHHHHHHCCcE-EecCCCCCCCeEEEEcC----CHHHHHHHHHHHHHHh
Confidence 13567777777654 32111123579999944 4788999999998765
No 261
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.35 E-value=2.9e-11 Score=109.68 Aligned_cols=210 Identities=13% Similarity=0.010 Sum_probs=143.6
Q ss_pred EEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEE
Q 046506 46 LFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWV 125 (310)
Q Consensus 46 ~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v 125 (310)
..|.++++.|.+|+..| ++.+.++++++||++.+.+..+++.. ..|.+..+..|.++ |.|.+++++
T Consensus 145 ~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid~~--------~~dvi~agsQKnlg-P~Gltvviv 210 (364)
T PRK12462 145 PFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFDVE--------AYGMVYAHAQKNLG-PAGVTVAII 210 (364)
T ss_pred cEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCChH--------HccEEEeeccccCC-CCceEEEEE
Confidence 47999999999999886 44445799999999988877766532 25999999999998 889999999
Q ss_pred eCchhHHhhhccCCccccccccccccccCCCCceeccCCC--cchHHHHHHHHHhCHH--HHHHHHHHHHHHHHHHHHHH
Q 046506 126 KDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR--FRSLKLWFVLRNYGVA--NLRHFLRSHVNMAKLFERLV 201 (310)
Q Consensus 126 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~--~~~~~~~~~~~~a~~l~~~L 201 (310)
+++. +.+.-...|.|+..... .+ ....+ .++ +....+-.+++.+..+ |++++.++..+.++.+++.|
T Consensus 211 s~~a-l~~~~~~~p~~ldy~~~-----~~-~~s~~--nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~i 281 (364)
T PRK12462 211 RRAL-LERVPDTLPPMLDFRTH-----VE-HRSNY--NTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATL 281 (364)
T ss_pred CHHH-HhhccccCCchhhHHHH-----Hh-cCCCC--CCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHH
Confidence 8774 33322212222221100 00 00000 122 2334555666666666 99999999999999999999
Q ss_pred cCCCCeEEec-C---CCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEE
Q 046506 202 GSDKRFEVVF-P---RHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIR 277 (310)
Q Consensus 202 ~~~~~~~v~~-~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iR 277 (310)
.+.+++.... . +....++|++.. ..+...+.+...+.|...+.+. +..+.+|
T Consensus 282 d~~~~~~~~~~~~~~RS~mnv~f~~~~----------------------~~l~~~f~~~a~~~gl~~lkGh--r~vgg~R 337 (364)
T PRK12462 282 DALNEVIDCHAHRAARSTMNVAFRFRQ----------------------PRLDTLFKEQSTEAGFCGLSGH--RSIGGIR 337 (364)
T ss_pred HhCCCcccCCCChhhcCcceEEEEcCC----------------------HHHHHHHHHHHHHCCCccccCC--cccCceE
Confidence 9987675432 1 124467787665 3445667777778886554432 2245699
Q ss_pred EEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 278 FAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 278 is~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+|+-+ ..+.|+|+.|++-+++..++
T Consensus 338 as~yn-a~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 338 ASLYN-AVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred EEcCC-CCCHHHHHHHHHHHHHHHHh
Confidence 99776 58899999999999887653
No 262
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.35 E-value=7.9e-11 Score=108.78 Aligned_cols=213 Identities=11% Similarity=0.061 Sum_probs=121.9
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++|++.+.+. +..+++....++.|...+ +++|.++|++||+++++|.+|.+.............++ .
T Consensus 156 d~~~l~~~~~~~------~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~-~ 228 (377)
T PRK02936 156 DIKALKEVMNEE------VAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGL-D 228 (377)
T ss_pred CHHHHHHhccCC------eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCC-C
Confidence 689999988643 347777777777776533 99999999999999999999964332221111001122 2
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
.|.+ +..|.+++..-.|++.. +++. .+.+... ... .++ ++-+....++.++++.+.
T Consensus 229 ~di~--t~sK~l~~G~~ig~v~~-~~~~-~~~~~~~--~~~--------------~t~-~~~~~~~aaa~a~l~~~~--- 284 (377)
T PRK02936 229 PDIV--TVAKGLGNGIPVGAMIG-KKEL-GTAFGPG--SHG--------------STF-GGNPLAMAAAKEVLQVIK--- 284 (377)
T ss_pred CcEE--EEcccccCCCccEEEEE-cHHH-HhhccCC--CCC--------------CCC-CCCHHHHHHHHHHHHHHH---
Confidence 4654 57899884333666654 3433 2332110 000 001 111123334444444331
Q ss_pred HHHHHHHHHHHHHHHHHHHcC----CCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHH
Q 046506 183 LRHFLRSHVNMAKLFERLVGS----DKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESIN 258 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~----~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 258 (310)
.++.+++..++.+++++.|.+ ++.+..+. ....++.+.+... ...+.+.+.
T Consensus 285 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~-~~g~~~~i~~~~~------------------------~~~~~~~l~ 339 (377)
T PRK02936 285 QPSFLEEVQEKGEYFLQKLQEELEHLECVKNIR-GKGLMIGIECTEE------------------------VAPVIEQLR 339 (377)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEe-ecceEEEEEecch------------------------HHHHHHHHH
Confidence 234456666666777776654 33322221 2334555555331 245667777
Q ss_pred hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 259 ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 259 ~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
++|.+.. + .+.+++|++++ ...++++++++++.|++.
T Consensus 340 ~~gv~v~-~---~g~~~lRi~p~-~~~~~~~i~~~i~~l~~~ 376 (377)
T PRK02936 340 EEGLLVL-S---AGPNVIRLLPP-LVVTKEELDQAVYLLKKV 376 (377)
T ss_pred HCCeEEe-c---CCCCEEEEECC-cccCHHHHHHHHHHHHHh
Confidence 7875443 2 24578999955 568899999999999764
No 263
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.35 E-value=1.2e-10 Score=106.27 Aligned_cols=174 Identities=17% Similarity=0.260 Sum_probs=119.7
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHH-HHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINS-DVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~-~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
+|++ +.+++.. +.+.+++++.+ + +.+|.+.+++|++-.+.||++|+++||++|+.++||.+++
T Consensus 126 ~gi~---~~~~d~~-------~~~~~~~~~~~~~------tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfa 189 (396)
T COG0626 126 FGVE---VTFVDPG-------DDEALEAAIKEPN------TKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFA 189 (396)
T ss_pred cCeE---EEEECCC-------ChHHHHHHhcccC------ceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcc
Confidence 4555 5555543 23567777764 4 4589999999999999999999999999999999999997
Q ss_pred cccccChhhhhhhcCCCCCCeeeeecccccccccce-EEEEEeCchhHHhhh-ccCCccccccccccccccCCCCceecc
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDC-CCLWVKDPSDLVNSL-STNPEYLKNKATESKQVVDYKDWQITL 162 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~-g~l~v~~~~~~~~~~-~~~~~y~~~~~~~~~~~~~~~~~~~~~ 162 (310)
.+.+.-+. . .++|+++-|+.|.+++-..+ |.+.+.+.+.+.+.+ .....+++.
T Consensus 190 tP~~q~PL----~---~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~------------------ 244 (396)
T COG0626 190 TPVLQRPL----E---LGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGA------------------ 244 (396)
T ss_pred cccccChh----h---cCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCC------------------
Confidence 77653332 1 25999999999999984322 223443333332322 110011111
Q ss_pred CCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC-----------------CceEEEEEEcC
Q 046506 163 SRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR-----------------HFAVVCFRVSP 224 (310)
Q Consensus 163 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------------~~~~v~~~~~~ 224 (310)
-......|..++ |...+.-+++++.++|+.+.+.|.+.|.++-+.-| ..++++|.+.+
T Consensus 245 --~l~p~dA~l~lR--GlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~ 319 (396)
T COG0626 245 --VLSPFDAWLLLR--GLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKN 319 (396)
T ss_pred --CCCHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCC
Confidence 123344566654 67889999999999999999999999999643222 35689998887
No 264
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.34 E-value=4.4e-10 Score=100.12 Aligned_cols=254 Identities=15% Similarity=0.131 Sum_probs=162.4
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD 80 (310)
+..|++ +++|.++...+.+++.++||+++.+..+.+.+...++++.++|+.|+..+ +..+.+.|.++|+.|++|
T Consensus 189 ~rTgve---ivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~D 265 (471)
T KOG0256|consen 189 WRTGVE---IVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISD 265 (471)
T ss_pred eccCce---EEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEee
Confidence 456787 99999998767899999999999999888888889999999999999766 666777888999999999
Q ss_pred cccccccccChhhhhhhcC---CC-CCCe--eeeecccccccc-cceEEEEEeCchhHHhhhccCCcccccccccccccc
Q 046506 81 AAYAGSACICPEFRHFIDG---VE-GADS--FSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVV 153 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~---~~-~~D~--~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~ 153 (310)
..+++......++....+- .. ..|. ++.+..|=|+.| .-.|++|..++... .+......|-.-.+
T Consensus 266 EIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~Vv-saA~kmssf~~vSs------- 337 (471)
T KOG0256|consen 266 EIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVV-SAATKMSSFGLVSS------- 337 (471)
T ss_pred hhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHH-HHHHHHhhccCCcH-------
Confidence 9997776554443322111 11 2233 567889999887 45678888777543 33222111211110
Q ss_pred CCCCceeccCCCcchHHHHHHHHHhCHHH-----HHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcch
Q 046506 154 DYKDWQITLSRRFRSLKLWFVLRNYGVAN-----LRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVM 228 (310)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~ 228 (310)
..-....+.+..++ +.+...|+...-+++-++|+++ ||..+ +...++++|.=-...
T Consensus 338 ---------------~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl-~s~AGlF~wvDlr~l-- 398 (471)
T KOG0256|consen 338 ---------------QTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCL-KSNAGLFCWVDLRKL-- 398 (471)
T ss_pred ---------------HHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCcee-ecCCeeEEEEEhHHh--
Confidence 00111112222222 2344456666678889999987 88877 445566554322211
Q ss_pred hhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE---CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 229 DKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVL---GGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
|+ +.. .+-..++.+++..+-++.++|+.. ...+|+|+++.+ ..++.++..++.|++++.
T Consensus 399 --L~---------s~t--fe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn--~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 399 --LT---------SLT--FEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFAN--MSEETLEVAMRRLKQFLD 460 (471)
T ss_pred --cC---------cCC--hHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEecc--CCHHHHHHHHHHHHHHHH
Confidence 00 000 111135666666664455555432 346899999774 677777778888888775
No 265
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.34 E-value=1.6e-10 Score=107.28 Aligned_cols=218 Identities=14% Similarity=0.076 Sum_probs=121.4
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCccccc----CChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAV----DTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~----~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
.|+++++++|++. +.+|+++...+++|.. +++++|+++|++||+++++|++|.+.............++
T Consensus 163 ~d~~~l~~~l~~~------~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~- 235 (389)
T PRK01278 163 GDIEALKAAITPN------TAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGV- 235 (389)
T ss_pred CCHHHHHHhhCCC------eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCC-
Confidence 5899999998643 4577777777777743 3699999999999999999999975432221110001122
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
..|.+ +..|.+++..-.|+++.+++ .. +.+... . .. .++ ++-+..+.++.++++.+..+
T Consensus 236 ~pdi~--t~sK~l~~G~~ig~~~~~~~-~~-~~~~~~-~----~~-----------~t~-~~~~~~~aaa~a~l~~l~~~ 294 (389)
T PRK01278 236 TPDIM--AVAKGIGGGFPLGACLATEE-AA-KGMTPG-T----HG-----------STY-GGNPLAMAVGNAVLDVILAP 294 (389)
T ss_pred CCCEE--EEehhccCCcceEEEEEcHH-HH-hccCCC-C----CC-----------CCC-CccHHHHHHHHHHHHHHhhh
Confidence 25654 56798874344777765543 32 222110 0 00 001 11112333444455544322
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC----CCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGS----DKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESI 257 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~----~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (310)
+ ..++..++.++++++|.+ .+++.....+...++.+.+... ..++...|
T Consensus 295 ~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~~------------------------~~~~~~~l 347 (389)
T PRK01278 295 G---FLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVVP------------------------NRDLVQAL 347 (389)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEecC------------------------HHHHHHHH
Confidence 2 334444555555555543 3322111112223333333221 13567777
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
.++|.+ +.+. +.+.+||+++ ...++++++.+++.|++.+.+
T Consensus 348 ~~~GV~-~~p~---~~~~lR~~p~-~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 348 RDEGLL-TVGA---GDNVVRLLPP-LIITEEEIDEALERLERAAES 388 (389)
T ss_pred HHCCeE-Eeec---CCCEEEEeCC-cccCHHHHHHHHHHHHHHHHh
Confidence 778754 3332 4578999965 457899999999999887754
No 266
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.33 E-value=4.7e-10 Score=105.18 Aligned_cols=228 Identities=12% Similarity=0.064 Sum_probs=130.0
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccC----ChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVD----TLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~----pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++|++.|.+..........|++.-...+.|.+. .+++|.++|++||+++++|.+|++.......+.....++ .
T Consensus 181 ~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v-~ 259 (425)
T PRK09264 181 TLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGI-T 259 (425)
T ss_pred HHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCC-C
Confidence 67888998865421111245677776667777643 499999999999999999999975433222211111223 3
Q ss_pred CCeeeeeccccccc-ccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFT-TLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~-p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
.|++++ .|.++. ...+|++++++. +. .+. +..... ++. +-+...++..++++.+ .
T Consensus 260 PDi~t~--~K~l~~~G~pigav~~~~~--i~-~~~--~~~~~~--------------T~~-gnp~~~aaa~a~l~~~--~ 315 (425)
T PRK09264 260 PDIVTL--SKSISGYGLPMALVLIKPE--LD-VWK--PGEHNG--------------TFR-GNNLAFVTATAALEEY--W 315 (425)
T ss_pred CCEEEe--ccccCCCccceEEEEEchh--hh-ccC--CCccCC--------------CCC-CCHHHHHHHHHHHHHH--H
Confidence 787766 498875 344677877644 22 211 100000 111 1111222333444211 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC----CCeEEecCC-CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSD----KRFEVVFPR-HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLES 256 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~----~~~~v~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 256 (310)
.-++..++..++.+++++.|.++ |.+ +...+ ...++.+.+.+ ......+.+.
T Consensus 316 ~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~-~~~vrg~Gl~~~i~l~~----------------------~~~~~~l~~~ 372 (425)
T PRK09264 316 SDDAFEKEVKAKGELVRERLEEIAAKYPGL-GAEVRGRGMMQGIDFGD----------------------GELAGKIAAE 372 (425)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhCCCc-eecceecccEEEEEecC----------------------hHHHHHHHHH
Confidence 12245666667777777776543 222 11112 23344555543 2233567777
Q ss_pred HHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 257 INASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 257 l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
+.+.|.+.. +.. .+..+||++++ ...|++||+.+++.|.+.+..+.
T Consensus 373 ~~~~Gv~~~-~~~-~~~~~lr~~p~-l~~t~~ei~~~~~~l~~~l~~~~ 418 (425)
T PRK09264 373 AFENGLIIE-TSG-PEDEVVKLLPP-LTIDEEELEEGLDILEEAVAEVL 418 (425)
T ss_pred HHHCCCEEe-ccC-CCCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 888886543 221 12368999954 67899999999999999987764
No 267
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.33 E-value=2.2e-10 Score=103.15 Aligned_cols=222 Identities=15% Similarity=0.126 Sum_probs=141.5
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++++++|+++| ..|++.-..-+.|.+.| ++++.++|++||++|++|..|.+.......+..-..++ .
T Consensus 173 Di~al~~ai~~~t------aAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV-~ 245 (404)
T COG4992 173 DIEALEAAIDEDT------AAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGV-E 245 (404)
T ss_pred CHHHHHHHhccCe------EEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCC-C
Confidence 6799999999854 47888777778887755 88999999999999999999977765554433222333 2
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
.|+++. -|.+++.+..|.++.+ +.. ...+ .|.--.+ + -+|-+..+....++++.+..
T Consensus 246 PDI~tl--aK~LgGG~PigA~la~-~~~-~~~~--~~G~HgS--------------T-fGGNpLacAv~~a~l~~l~~-- 302 (404)
T COG4992 246 PDILTL--AKALGGGFPIGAMLAT-EEI-ASAF--TPGDHGS--------------T-FGGNPLACAVALAVLEVLLE-- 302 (404)
T ss_pred CCEEEe--eccccCCccceeeEEc-hhh-hhcC--CCCcccC--------------C-CCcCHHHHHHHHHHHHHHcc--
Confidence 787776 5888887788888877 322 1221 1111110 1 11111122333344444433
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC-CCeEEecCCC--ceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh
Q 046506 183 LRHFLRSHVNMAKLFERLVGSD-KRFEVVFPRH--FAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA 259 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 259 (310)
+.+.++..+..++|.+.|.++ ..+.++...+ .-++.+.+.+.. ...++...+.+
T Consensus 303 -e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~----------------------~a~~~~~~~~~ 359 (404)
T COG4992 303 -EGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPY----------------------RARDIVRALRE 359 (404)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcc----------------------cHHHHHHHHHH
Confidence 455666667778888888764 2333333322 334555555420 12467777888
Q ss_pred cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 260 SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 260 ~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
+|.+... + +..++||.+. .-.++||++..++++++.+..+..
T Consensus 360 ~gvL~~~-a---~~~ViR~~Pp-L~i~~eei~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 360 EGVLVLP-A---GPNVIRFLPP-LVITEEEIDEALDALERALAAASA 401 (404)
T ss_pred CCeEEec-C---CCCeEEecCC-ccCCHHHHHHHHHHHHHHHHHhhh
Confidence 8854332 2 3559999966 679999999999999999987644
No 268
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.32 E-value=7.9e-11 Score=114.50 Aligned_cols=258 Identities=12% Similarity=0.156 Sum_probs=148.0
Q ss_pred ecCCCCCCEEEEecCCCCC---cccC-----HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcE
Q 046506 5 IVGIDVKNFRAIKTTKSSS---YGLS-----PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIW 76 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~---~~id-----~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~ 76 (310)
+.|.. .+++++.-+.- +.++ ++.++++|.+.... ..|+.++++ .+|..|.+-++++|+++|+.++
T Consensus 254 lsga~---PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~a-k~p~~~vit-~pTYdG~~yd~~~I~~~~~~~~-- 326 (714)
T PRK15400 254 MSDVT---PIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNA-TWPVHAVIT-NSTYDGLLYNTDFIKKTLDVKS-- 326 (714)
T ss_pred HcCCe---EEEecccccccCCccCCCccccCHHHHHHHHHhCccc-cCccEEEEE-CCCCccEecCHHHHHHHhCCCC--
Confidence 45555 77777654321 1235 89999999876432 235555555 4577899999999999999998
Q ss_pred EEeecccccccccChhhhhhhcCC-CCC---C--eeeeecccccccccceEEEEEeCc---hhHHhhh----ccCCcccc
Q 046506 77 VHVDAAYAGSACICPEFRHFIDGV-EGA---D--SFSLNAHKWFFTTLDCCCLWVKDP---SDLVNSL----STNPEYLK 143 (310)
Q Consensus 77 l~vD~a~~~~~~~~~~~~~~~~~~-~~~---D--~~~~~~hK~l~~p~g~g~l~v~~~---~~~~~~~----~~~~~y~~ 143 (310)
+|||.||++...+.+.+++. ..+ .++ | +++-|.||++.+..++++++++.. +.+.+++ +.+|.|.-
T Consensus 327 ilvDEAwgah~~F~p~~~~~-sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~vd~~~~n~a~~m~~STSPsY~l 405 (714)
T PRK15400 327 IHFDSAWVPYTNFSPIYEGK-CGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGI 405 (714)
T ss_pred EEEEccchhhhccCcccCCc-ChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCCCHHHHHHHHHHHcCCCcHHHH
Confidence 79999998887666654321 112 245 5 899999999999999999988653 1122221 12222211
Q ss_pred ccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCC------eEEecCCCc-e
Q 046506 144 NKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKR------FEVVFPRHF-A 216 (310)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~------~~v~~~~~~-~ 216 (310)
.+++-.+.+.+....-++.+++..+.+..+++.|.++++ +.++.+... .
T Consensus 406 ------------------------~ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~ 461 (714)
T PRK15400 406 ------------------------VASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDT 461 (714)
T ss_pred ------------------------HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhccc
Confidence 112222222332223456778888899999999988877 777642210 0
Q ss_pred EEEEE-------------------EcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEE
Q 046506 217 VVCFR-------------------VSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIR 277 (310)
Q Consensus 217 ~v~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iR 277 (310)
.-+|. +.|..++..+.+....+ ...+..--...+.+.|.+.|+ .+..+ +...+=
T Consensus 462 ~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g---~~~~~Gipg~~v~~~L~e~gI-~~E~~---d~~~iL 534 (714)
T PRK15400 462 TECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDG---TMSDFGIPASIVAKYLDEHGI-VVEKT---GPYNLL 534 (714)
T ss_pred chhcccCccccccCcccccccccccCCceEEEEeCCCCCCc---cccccCCCHHHHHHHHHHcCC-EEEec---CCCeEE
Confidence 00111 12211111110000000 000000112355666766653 44333 222333
Q ss_pred EEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 278 FAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 278 is~~~~~~t~edi~~li~~l~~~~~ 302 (310)
+- .++.+|+++++.|+++|.++-+
T Consensus 535 fl-~s~g~t~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 535 FL-FSIGIDKTKALSLLRALTDFKR 558 (714)
T ss_pred EE-eCCCCCHHHHHHHHHHHHHHHH
Confidence 44 3478999999999999998744
No 269
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.32 E-value=4.2e-10 Score=104.93 Aligned_cols=222 Identities=12% Similarity=0.074 Sum_probs=126.3
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|++++++.+.++ +.+|++.-.+++.|...| +++|.++|++||+++++|.+|++.............++ .
T Consensus 173 d~~~l~~~l~~~------~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~-~ 245 (403)
T PRK05093 173 DLAAVKAVIDDH------TCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGV-T 245 (403)
T ss_pred CHHHHHHHhcCC------eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCC-C
Confidence 678999888643 446666655565565544 99999999999999999999975422221110001122 2
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
.|.+ +..|.+++..-.|+++.++. .. +.+... .... ++ ++-+....++.++++.+..
T Consensus 246 pdi~--s~sK~l~~G~rig~vv~~~~-i~-~~l~~~--~~~~--------------t~-~~~~~~~~aa~a~L~~~~~-- 302 (403)
T PRK05093 246 PDIL--TSAKALGGGFPIGAMLTTAE-IA-SHFKVG--THGS--------------TY-GGNPLACAVAEAVFDIINT-- 302 (403)
T ss_pred CCEE--EecccccCCcceEEEEEcHH-HH-hhcCCC--CCCC--------------CC-CCCHHHHHHHHHHHHHHhh--
Confidence 5654 45799874344777766543 32 222110 0000 11 1112233344455544422
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCC-CeEEec-CCC-ceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh
Q 046506 183 LRHFLRSHVNMAKLFERLVGSDK-RFEVVF-PRH-FAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA 259 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~~-~~~v~~-~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 259 (310)
.+..++..++.+++.+.|.++. .+.+.. .+. ...+.+.+.+.. .....++...+.+
T Consensus 303 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~--------------------~~~~~~~~~~l~~ 361 (403)
T PRK05093 303 -PEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQY--------------------KGRARDFLNAAAE 361 (403)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcc--------------------hhHHHHHHHHHHH
Confidence 3445667777788888887641 121211 222 333444443310 1123467777878
Q ss_pred cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 260 SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 260 ~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+|.+ +.+ .+.+.+|++++ ...++++++.+++.|.+.+..+
T Consensus 362 ~Gv~-v~~---~g~~~lRl~~~-~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 362 EGVM-VLV---AGPDVLRFAPS-LVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred CCeE-Eec---CCCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 8754 433 24578999955 5568999999999999987654
No 270
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.32 E-value=5.8e-11 Score=109.02 Aligned_cols=234 Identities=16% Similarity=0.148 Sum_probs=119.3
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
|...|++ ++.+|+++++ ..| .+. ...|++ ..+|..|.++++++|++++|++|+.+++ ++
T Consensus 175 a~~~g~~---iv~~~~~~~~--~~d--------~~~------~a~v~v-q~Pn~~G~~ed~~~i~~~~h~~gal~~~-~a 233 (429)
T PF02347_consen 175 AAPLGIE---IVEVPLDEDG--TTD--------DDD------TAAVMV-QNPNTFGVFEDIKEIADIAHAAGALVIV-GA 233 (429)
T ss_dssp CCHCCEE---EEEE-BBTTC--SB---------STT------EEEEEE-ESS-TTSB--THHHHHHHHHHTT-EEEE-CG
T ss_pred hhhCCeE---EEEecccccC--Ccc--------ccC------eEEEEe-ecCCCCceEeeHHHHHHHHHHcCCEEEE-ec
Confidence 3456777 8899988654 555 121 334555 4555689999999999999999999988 76
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeeccccccccc-----ceEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTL-----DCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~-----g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
--..........+ -++|++ ++-||.|+.|. +.|++.+++. . .+.+ |..+-+...+..+...++
T Consensus 234 d~~aL~~l~~Pge-----~GADI~-vg~~Q~fg~p~~~GGP~~G~~a~~~~-l-~r~l---PGRiVG~t~D~~G~~~~~- 301 (429)
T PF02347_consen 234 DPNALGGLKSPGE-----YGADIV-VGEHQTFGIPMGFGGPGAGFFAVRED-L-VRQL---PGRIVGQTKDADGKRAFV- 301 (429)
T ss_dssp GCCGCCTC--GGG-----GT-SEE-EECCTTTT---CCC-S--EEEEE-GG-G-GGGS----S-EEEEEEBCCCSCCEE-
T ss_pred CHHHHhCcCChhh-----cCccEE-eeCCCCCcccCCCCCCCeeeEEEhhh-h-hhhC---CCceecccccccccceee-
Confidence 4322222211111 169999 66699998764 4556766655 2 2332 444443322212211110
Q ss_pred ceecc----CCC--c----------chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEE
Q 046506 158 WQITL----SRR--F----------RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFR 221 (310)
Q Consensus 158 ~~~~~----~~~--~----------~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~ 221 (310)
.++|. -|| + .++..+..+..+|.+|+.+..+++..++.|++++|.++.++.+..++-...+..
T Consensus 302 ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~~~f~e~v~~- 380 (429)
T PF02347_consen 302 LTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPFDNPFFFEFVVV- 380 (429)
T ss_dssp EE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSSSSSBSSEEEE-
T ss_pred eccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCceeeeee-
Confidence 01111 022 1 123445566678999999999999999999999999874444332222333322
Q ss_pred EcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHH
Q 046506 222 VSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVV 297 (310)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l 297 (310)
..+. ... .++.++....| +.... ...+.+-+|++- -+|+||||++++++
T Consensus 381 ~~~~---------------------~~~-~~l~~~~~~~g---l~~~~-~~~~~~li~~TE-~~t~edid~lv~~f 429 (429)
T PF02347_consen 381 FSKD---------------------KEV-EELLKRGIEGG---LNLRY-PDDGALLICVTE-TRTKEDIDRLVEAF 429 (429)
T ss_dssp ESS----------------------HHH-HHHHHTT-------EEEGG-G-SSEEEEE--T-T--HHHHHHHHH--
T ss_pred cCCc---------------------HHH-HHHHHHHHhcC---CCccc-cCCCeEEEEccC-CCCHHHHHHHHhcC
Confidence 2221 111 12444433344 11111 123377899885 58899999999875
No 271
>PRK09148 aminotransferase; Validated
Probab=99.31 E-value=2.5e-10 Score=106.53 Aligned_cols=249 Identities=12% Similarity=0.047 Sum_probs=140.7
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCCh---HHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTL---KPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl---~~I~~l~~~~g~~l~v 79 (310)
++.+|+. ++.+|.++++. .++++++++..... .+.+++++.++|++|.+.+. ++|+++|++||+++++
T Consensus 133 ~~~~g~~---v~~v~~~~~~~---~~~~l~~~~~~~~~---~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~ 203 (405)
T PRK09148 133 FIMAGGV---IRSVPAEPDEE---FFPALERAVRHSIP---KPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILS 203 (405)
T ss_pred HHhcCCE---EEEEeCCCCCC---CccCHHHHHhhccc---cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEE
Confidence 3456776 88999876432 34556666643211 24578888889999999886 6788999999999999
Q ss_pred ecccccccccChhhhhh--hcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 80 DAAYAGSACICPEFRHF--IDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~--~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
|.+++............ ........++..|..|.++.| .-+|+++ .++..+...... ..+.....
T Consensus 204 De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v-~~~~~i~~l~~~-~~~~~~~~---------- 271 (405)
T PRK09148 204 DLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAV-GNERLIAALTRV-KSYLDYGA---------- 271 (405)
T ss_pred eccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeee-CCHHHHHHHHHH-HHHhccCC----------
Confidence 99997543321111000 011111234578999998755 3367775 455444322111 01111000
Q ss_pred CceeccCCCcchHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhh
Q 046506 157 DWQITLSRRFRSLKLWFVLRNY--GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~ 234 (310)
..+...++...+ ....+++..++..+..+.+.+.|.+. ++.+..+.....+.+.+++..
T Consensus 272 ----------~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~f~~~~l~~~~-------- 332 (405)
T PRK09148 272 ----------FTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRA-GWDIPPPAASMFAWAPIPEAF-------- 332 (405)
T ss_pred ----------ChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCccCCCCeeEEEEEECCCcc--------
Confidence 111111222222 23455666777788888899999875 666543333444445443310
Q ss_pred hccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 235 YENSLLSEEERINEFNRELLESIN-ASGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
. ..-..++...+. +.|.....+..+. +.+++|+++. .+++.+...++.|.+++....
T Consensus 333 -------~----~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~---~~~~~l~~al~~l~~~l~~~~ 392 (405)
T PRK09148 333 -------R----HLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV---ENEQRIRQAARNIKRFLSSAD 392 (405)
T ss_pred -------C----CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHHH
Confidence 0 000134555555 4565444333222 2578999964 357888888888888776654
No 272
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.30 E-value=4.6e-10 Score=106.97 Aligned_cols=239 Identities=12% Similarity=-0.005 Sum_probs=134.4
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCC
Q 046506 29 DSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGAD 104 (310)
Q Consensus 29 ~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D 104 (310)
++|+++|.+.. ...+..|++.-...+.|.+.| +++|.++|++||+++++|.++.++......+.-...++ ..|
T Consensus 247 ~~le~~l~~~~--~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv-~PD 323 (504)
T PLN02760 247 DNLENLILKEG--PETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNI-KPD 323 (504)
T ss_pred HHHHHHHHhcC--CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCC-CCc
Confidence 56777775321 123556777767777898888 99999999999999999999965544443322112233 278
Q ss_pred eeeeeccccccccc-ceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHH
Q 046506 105 SFSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANL 183 (310)
Q Consensus 105 ~~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 183 (310)
++++ .|.+++.+ ..|.+.++++ .. +.+....+...... ...++. +-+..+.+..++++.+..
T Consensus 324 ivtl--gK~lggG~~PigAv~~~~~-i~-d~~~~~~~~~~~~~---------h~~T~~-gnPl~~Aaala~Le~i~~--- 386 (504)
T PLN02760 324 LVSL--AKALSSAYMPIGAVLVSPE-IS-DVIHSQSNKLGSFA---------HGFTYS-GHPVSCAVALEALKIYKE--- 386 (504)
T ss_pred EEEe--cccccCCccccceEeecHH-HH-hhhhcccccccCcc---------cCCCCC-CCHHHHHHHHHHHHHHHh---
Confidence 7555 79887632 3566666533 32 33211100000000 000111 112233444455554433
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCeEEecCC--CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcC
Q 046506 184 RHFLRSHVNMAKLFERLVGSDKRFEVVFPR--HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASG 261 (310)
Q Consensus 184 ~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 261 (310)
++..++..++.++|++.|+++....++... ...++.+.+..... ...+.. .-..+...+.+.+.++|
T Consensus 387 ~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~---------~~~~~~--~~~~~~~~i~~~~~~~G 455 (504)
T PLN02760 387 RNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKS---------PNDPFP--AEWGVGAYFGAECKKRG 455 (504)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCc---------cccccc--chhHHHHHHHHHHHhCC
Confidence 356778888888888888765333222211 12344555533110 000000 00123456777788888
Q ss_pred cEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 262 KAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 262 ~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.+... . ...+|++++ ...|++|||.+++++.+.+..+
T Consensus 456 vl~~~-~----g~~lrl~Pp-l~it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 456 MLVRV-A----GDNIMMSPP-LIITPEEVDELISIYGKALKAT 492 (504)
T ss_pred cEEEe-c----CCEEEEECC-CCCCHHHHHHHHHHHHHHHHHH
Confidence 64432 1 246899955 6799999999999999888765
No 273
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.30 E-value=9.9e-10 Score=103.02 Aligned_cols=226 Identities=8% Similarity=0.041 Sum_probs=131.8
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|.+++++.|.+....+.....+++.....+.|.+.| ++++.++|++||+++++|.+|.+.......+.-...++ .
T Consensus 207 d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv-~ 285 (442)
T TIGR03372 207 DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGV-Q 285 (442)
T ss_pred CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCC-C
Confidence 467788888653222233567777777788898888 99999999999999999999965433332211111233 3
Q ss_pred CCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
.|+++ ..|.+++. ...|.+..+++ .. +.+... ++.... + -++-+..+++..++++.+..+
T Consensus 286 PDivt--~gK~lg~G~~Pigavv~~~~-i~-~~~~~~-~~~~~~-------------T-~~gnp~~~Aaa~a~L~~i~~~ 346 (442)
T TIGR03372 286 PDILC--LAKALGGGVMPIGATIATEA-VF-SVLFDN-PFLHTT-------------T-FGGNPLACAAALATINELLEK 346 (442)
T ss_pred CCeee--ehhhhcCCcccceEEEecHH-HH-Hhhhcc-CccccC-------------C-CCCCHHHHHHHHHHHHHHHhc
Confidence 78776 57988754 24666666533 32 332111 111110 0 111122334444555555333
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCC-CeE-EecC--CCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSDK-RFE-VVFP--RHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESI 257 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~~-~~~-v~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (310)
+..++..++.+++++.|+++. .+. .+.. -...++.+.+... .....+.+.+
T Consensus 347 ---~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~~----------------------~~~~~i~~~l 401 (442)
T TIGR03372 347 ---NLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRDN----------------------EIGYAFAKEL 401 (442)
T ss_pred ---cHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEEEeCCh----------------------HHHHHHHHHH
Confidence 345566677777777776531 111 1111 1234455555431 2234677788
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
.++|.+. .+.. .+..++||+++ ...|++|+|++++++.+.
T Consensus 402 ~~~Gvl~-~~~~-~~~~~lr~~Pp-l~~t~~~id~~~~~l~~~ 441 (442)
T TIGR03372 402 FQQNILV-AGTL-NNAKSIRIEPP-LTITIEQCALVIKAAKDA 441 (442)
T ss_pred HHCCcEE-eecC-CCCCEEEEECC-cccCHHHHHHHHHHHHHh
Confidence 8888543 3221 12468999966 679999999999999874
No 274
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.30 E-value=3.9e-10 Score=106.06 Aligned_cols=234 Identities=13% Similarity=0.130 Sum_probs=131.6
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCC
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGA 103 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 103 (310)
.++||++|.... ......|++.....+.|.+.| +++|.++|++||+++++|.+|.+.............++ ..
T Consensus 201 ~~~le~~l~~~~--~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~P 277 (442)
T PRK13360 201 ADELERLVTLHD--ASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGV-TP 277 (442)
T ss_pred HHHHHHHHHhcC--CCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCC-CC
Confidence 567888885321 123557777777888899988 99999999999999999999954433232211111233 36
Q ss_pred Ceeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 104 DSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 104 D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
|++++ .|.+++. ...|.+..+++ .. +.+...+..... . ....++. +.+....+..++++.+..+
T Consensus 278 Divt~--gK~l~gG~~P~gav~~~~~-i~-~~~~~~~~~~~~-------~--~~~~T~~-g~pl~~aaa~a~L~~l~~~- 342 (442)
T PRK13360 278 DLLTC--AKGLTNGAIPMGAVFVSSE-IH-DAFMQGPEAGIE-------F--FHGYTYS-GHPLACAAALATLDLYERE- 342 (442)
T ss_pred ceeee--eeccccCccceEEEEEcHH-HH-HHhhcCCccccc-------c--ccCCCCC-CCHHHHHHHHHHHHHHHhC-
Confidence 87655 7988642 23566655443 32 333221110000 0 0001111 2223344455566655433
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCeEEecCC-Cce-EEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhc
Q 046506 183 LRHFLRSHVNMAKLFERLVGSDKRFEVVFPR-HFA-VVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINAS 260 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 260 (310)
...++..++.+++++.|+++..+..+.+. ..+ ...+.+.+... .+ ......+...+.++
T Consensus 343 --~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~-------------~~----~~~~~~~~~~l~~~ 403 (442)
T PRK13360 343 --GLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDG-------------KP----GKRAYEVFLKCFEK 403 (442)
T ss_pred --CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCC-------------Cc----chhHHHHHHHHHHC
Confidence 35667777888888888765323222221 111 22333332110 00 11224566677788
Q ss_pred CcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 261 GKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 261 g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
|.+ +.+. ...+||+++ ..+|++|||.++++|.+.+.++
T Consensus 404 Gvl-~~~~----~~~lr~~Pp-l~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 404 GLM-IRYT----GDILALSPP-LIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred CcE-EEec----CCEEEEeCC-CccCHHHHHHHHHHHHHHHHHh
Confidence 754 3321 257999955 6799999999999999988654
No 275
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.30 E-value=3.6e-10 Score=105.01 Aligned_cols=217 Identities=12% Similarity=0.079 Sum_probs=123.2
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccc-cC---ChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITA-VD---TLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~-~~---pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++|++++.+. +.+|+++...+++|. .. .+++|.++|++||+++++|.++++.............++ .
T Consensus 171 d~~~l~~~i~~~------~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~-~ 243 (396)
T PRK02627 171 DIEALKAAITDK------TAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGI-E 243 (396)
T ss_pred CHHHHHHhcCCC------eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCC-C
Confidence 889999998532 446777666777774 22 389999999999999999999974432221100001122 2
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
.|.++ ..|.+++....|+++.+++ .. +.+... .+.. ++ ++.+....++.++++.+..
T Consensus 244 pdi~t--~sK~~~~G~rig~~~~~~~-~~-~~~~~~-~~~~---------------t~-~~~~~~~~aa~~~l~~~~~-- 300 (396)
T PRK02627 244 PDIMT--LAKGLGGGVPIGAVLAKEK-VA-DVFTPG-DHGS---------------TF-GGNPLACAAALAVIEIIEE-- 300 (396)
T ss_pred CCEEE--EcchhhCCcccEEEEEcHH-HH-hccCCC-CCCC---------------CC-CCCHHHHHHHHHHHHHHhh--
Confidence 56554 5699885555788776533 33 222110 0000 00 1111223333444443322
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC----CCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHH
Q 046506 183 LRHFLRSHVNMAKLFERLVGSD----KRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESIN 258 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~----~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 258 (310)
++..++..++.+++++.|.++ +.+..+ .....++.+.+... ..++.+.+.
T Consensus 301 -~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~i~~~~~------------------------~~~~~~~l~ 354 (396)
T PRK02627 301 -EGLLENAAEVGEYLRAKLRELLEKYPGIKEV-RGLGLMIGIELDRP------------------------AAEIVKKAL 354 (396)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHHhCCCeeee-ccCcEEEEEEecCc------------------------HHHHHHHHH
Confidence 334555666666666666543 222222 12344555555211 145777777
Q ss_pred hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 259 ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 259 ~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
++|. ++.+. +...+|++++ ...++++++.+++.|++.+..+
T Consensus 355 ~~Gv-~v~~~---~~~~lRi~~~-~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 355 EKGL-LINVT---GDNVLRLLPP-LIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred HCCe-EEeec---CCCEEEEECC-cccCHHHHHHHHHHHHHHHHhh
Confidence 7875 44432 3467999955 5678999999999999887654
No 276
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.30 E-value=7.5e-10 Score=104.13 Aligned_cols=235 Identities=11% Similarity=0.038 Sum_probs=134.5
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
++++|++.+..... ...+..|++.-...+.|.+.| +++|.++|++||+++++|.+|++.............++ .
T Consensus 191 ~~~~l~~~~~~~~~-~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv-~ 268 (433)
T PRK08117 191 CLRDLESLFKHQVT-PEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGV-V 268 (433)
T ss_pred HHHHHHHHHHhccC-CCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCC-C
Confidence 56777887764211 113557777777788899988 99999999999999999999985433222111001122 2
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
.|+ .+..|.+++..-.|++..+++ .. +.+... .+.. ++ .+-+..+.+..++++.+..
T Consensus 269 pDi--~t~sK~lg~G~pigav~~~~~-i~-~~~~~~-~~~~---------------T~-~~np~~~aaa~a~L~~l~~-- 325 (433)
T PRK08117 269 PDI--MTIAKGIASGLPLSAVVASKE-LM-EQWPLG-SHGT---------------TF-GGNPVACAAALATLEVIKE-- 325 (433)
T ss_pred CCE--eehhhhccCCCcceeEEEcHH-HH-hhccCC-CCCC---------------CC-CcCHHHHHHHHHHHHHHHh--
Confidence 565 567899885444676665533 33 222110 0000 11 1112233444455554422
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCC-CeEEec-CCCc-eEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh
Q 046506 183 LRHFLRSHVNMAKLFERLVGSDK-RFEVVF-PRHF-AVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA 259 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~~-~~~v~~-~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 259 (310)
+...++..++.+++++.|.++. .+.+.. .+.. .++.+.+.+... .+. ......+.+.+.+
T Consensus 326 -~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~-------------~~~---~~~~~~~~~~l~~ 388 (433)
T PRK08117 326 -EKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDG-------------EPD---GDAVEKILDKCLE 388 (433)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCC-------------Ccc---hHHHHHHHHHHHH
Confidence 3456667777788888776541 122211 1222 233444433210 000 1233566777888
Q ss_pred cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 260 SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 260 ~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
.|.++.... ....++|++++ ..+|+++|+.++++|.+.+.++.+
T Consensus 389 ~Gv~~~~~g--~~~~~lRl~p~-~~~t~~~i~~~~~~l~~~l~~~~~ 432 (433)
T PRK08117 389 KGLLFYLCG--NAGNVLRMIPP-LTVTKEEIDEGLDILDEALTEYEA 432 (433)
T ss_pred CCCEEeecC--CCCCEEEEeCC-ccCCHHHHHHHHHHHHHHHHHHhc
Confidence 886553311 12468999965 578999999999999999877654
No 277
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.29 E-value=2.3e-10 Score=106.66 Aligned_cols=224 Identities=12% Similarity=0.049 Sum_probs=130.4
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccc----cCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITA----VDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~----~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
-|+++|++.|.+. +..|++.-...+.|. ...+++|.++|++||+++++|.+|.+.............++
T Consensus 171 ~d~~~l~~~l~~~------~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v- 243 (406)
T PRK12381 171 NDLNSASALIDDQ------TCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGV- 243 (406)
T ss_pred CCHHHHHHhccCC------eeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCC-
Confidence 3688999988642 346666655555564 35589999999999999999999954433222111001122
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
..|+ ++..|.+++..-.|.+..+++ .. +.+... ... .++ ++.+.....+.++++.+.
T Consensus 244 ~pDi--~t~sK~l~gG~~ig~~~~~~~-~~-~~~~~~---~~~-------------~t~-~~~pl~~aaa~a~l~~l~-- 300 (406)
T PRK12381 244 TPDV--LTTAKALGGGFPIGAMLTTEK-CA-SVMTVG---THG-------------TTY-GGNPLASAVAGKVLELIN-- 300 (406)
T ss_pred CCCE--EEehhhhhCCCceEEEEEcHH-HH-hhcCCC---CCC-------------CCC-CCCHHHHHHHHHHHHHHh--
Confidence 2576 466799875445677765533 32 332110 000 011 112223344445555542
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC-CCeEEecCC-C-ceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSD-KRFEVVFPR-H-FAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESIN 258 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~~-~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 258 (310)
-.++.++..++.+++.+.|+++ ..+.++... . ..++.+.+.+.. ......+.+.+.
T Consensus 301 -~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~--------------------~~~~~~~~~~l~ 359 (406)
T PRK12381 301 -TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEY--------------------AGKAKQISQEAA 359 (406)
T ss_pred -hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCch--------------------hhHHHHHHHHHH
Confidence 2346677778888888888765 122222222 2 233344443310 122346777788
Q ss_pred hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 259 ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 259 ~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
++|.+.. +. +...+|++++ ...|++||+.+++.|++.+.++.
T Consensus 360 ~~Gv~v~-~~---g~~~lRl~p~-~~~t~~~i~~~~~~l~~~l~~~~ 401 (406)
T PRK12381 360 KAGVMVL-IA---GPNVVRFAPA-LNISEEEITTGLDRFARACERFV 401 (406)
T ss_pred HCCcEEe-eC---CCCEEEEeCC-ccCCHHHHHHHHHHHHHHHHHHH
Confidence 8886543 22 3468999965 56889999999999999987763
No 278
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.29 E-value=1.3e-10 Score=106.88 Aligned_cols=228 Identities=11% Similarity=0.086 Sum_probs=139.9
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHH---HHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDV---AKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l---~~~~g~~l~v 79 (310)
+...|+. ++.||.+. +.+|+++|++++++.+ .++++..++|++|.+.+.+++.++ |++++ ++++
T Consensus 122 ~~~~g~~---v~~v~~~~---~~~d~~~l~~~~~~~~------~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~ii 188 (366)
T PRK01533 122 AIIEGCE---VKEVALNN---GVYDLDEISSVVDNDT------KIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVI 188 (366)
T ss_pred HHHcCCE---EEEeecCC---CCcCHHHHHHHhCcCC------cEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEE
Confidence 4556776 88999863 3699999999886543 367778899999999886665555 45555 6788
Q ss_pred ecccccccccCh--hhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 80 DAAYAGSACICP--EFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 80 D~a~~~~~~~~~--~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
|.++........ ........ ..--++..|+.|.++.| .-+|+++. +++.+.........+
T Consensus 189 De~y~~~~~~~~~~~~~~~~~~-~~~vi~~~SfSK~~~l~GlRiG~~i~-~~~~~~~l~~~~~~~--------------- 251 (366)
T PRK01533 189 DEAYYEYVTAKDFPETLPLLEK-HKNILVLRTFSKAYGLASFRVGYAVG-HEELIEKLNVVRLPF--------------- 251 (366)
T ss_pred EccHHHhhccccCcchhHHhcc-CCCEEEEeCchHHhcChHHHHhHHhC-CHHHHHHHHHhcCCC---------------
Confidence 999853322110 00011111 01235678999998754 33566543 454443321111110
Q ss_pred CceeccCCCcchHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhh
Q 046506 157 DWQITLSRRFRSLKLWFVLRNYG-VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
....+...++...+. .+..++..+...+..+++.+.++.+ ++++. +++.+.+.+.+...
T Consensus 252 --------~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~-g~~~~-~~~~nf~~~~~~~~---------- 311 (366)
T PRK01533 252 --------NVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKEN-EIPFY-QSQTNFIFLPVENG---------- 311 (366)
T ss_pred --------CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccC-CCcCcEEEEeCCCH----------
Confidence 012233333333443 3445566666777777888888776 77765 56777776765321
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.++.+.|.+.|..... . ..++|+++. +.++.++|+++|+++....
T Consensus 312 ---------------~~~~~~l~~~GI~Vr~-~----~~~iRis~~----~~~~~~~l~~al~~~~~~~ 356 (366)
T PRK01533 312 ---------------GEIYEACAHAGFIIRP-F----PNGVRITVG----TREQNEGVISVLQQHFENK 356 (366)
T ss_pred ---------------HHHHHHHHHCCcEEcc-C----CCceEEeCC----CHHHHHHHHHHHHHHHHhc
Confidence 3567777788764433 1 357999944 4789999999999988665
No 279
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.29 E-value=7.6e-10 Score=104.16 Aligned_cols=234 Identities=15% Similarity=0.126 Sum_probs=131.3
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCC
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGA 103 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 103 (310)
.+++++.|.... ......|++.-..++.|.+.| +++|.++|++||+++++|.+|.+.............++ ..
T Consensus 204 ~~~l~~~i~~~~--~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv-~P 280 (445)
T PRK09221 204 ADDLERLVALHD--ASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGV-TP 280 (445)
T ss_pred HHHHHHHHHhcC--CCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCC-CC
Confidence 457777776421 113557777777888899988 99999999999999999999965433222211101222 26
Q ss_pred Ceeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 104 DSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 104 D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
|++++ .|.+++. ...|.+..+++ .. +.+...+.+..... ...++. +.+.......++++.+..+
T Consensus 281 Di~~~--gK~l~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~~~~---------~~~T~~-~~pl~~aaa~a~L~~i~~~- 345 (445)
T PRK09221 281 DIITF--AKGLTNGAIPMGAVIASDE-IY-DAFMQGPEYAIEFF---------HGYTYS-AHPVACAAGLATLDIYREE- 345 (445)
T ss_pred CEEEe--ccccccCcccceeeEEcHH-HH-HhhccCcccccccc---------cccCCC-cCHHHHHHHHHHHHHHHhc-
Confidence 87655 5777532 12455655533 33 33322111100000 001111 1122233344555555333
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCeEEecCC-Cce-EEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhc
Q 046506 183 LRHFLRSHVNMAKLFERLVGSDKRFEVVFPR-HFA-VVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINAS 260 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 260 (310)
...++..++.++|++.|+++.++..+.+. ..+ +..+.+.+... .. ......+.+.+.++
T Consensus 346 --~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~--------------~~---~~~~~~~~~~~~~~ 406 (445)
T PRK09221 346 --DLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPG--------------AP---GARGYEAFMKCFEK 406 (445)
T ss_pred --cHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEecccc--------------cc---cchHHHHHHHHHHC
Confidence 45778888999999988876333222221 122 23343432100 00 11123566777788
Q ss_pred CcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 261 GKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 261 g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
|.+ +.+ ...++||+++ ...|++||+.++++|++.+.++
T Consensus 407 Gv~-~~~----~~~~lr~~Pp-l~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 407 GLL-VRY----TGDTIALSPP-LIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred CeE-Eee----cCCEEEEECC-ccCCHHHHHHHHHHHHHHHHhh
Confidence 844 432 2358999955 6799999999999999988664
No 280
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.27 E-value=1.2e-09 Score=102.09 Aligned_cols=224 Identities=11% Similarity=0.066 Sum_probs=127.2
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
+++.+++.+.+.......+..|++.-.....|.+.| +++|.++|++||+++++|.++.+.......+.....++ .
T Consensus 177 ~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v-~ 255 (412)
T TIGR02407 177 TIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGI-E 255 (412)
T ss_pred HHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCC-C
Confidence 467788888643211112456666666666777433 88999999999999999999875533322211111233 3
Q ss_pred CCeeeeeccccccc-ccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHH-hCH
Q 046506 103 ADSFSLNAHKWFFT-TLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRN-YGV 180 (310)
Q Consensus 103 ~D~~~~~~hK~l~~-p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~ 180 (310)
.|+++++ |++++ ...+|++++++. + ..+. +..... ++ ++-+...+...++++. +..
T Consensus 256 PDi~~~~--K~lg~~G~pigav~~~~~--~-~~~~--~~~~~~--------------T~-~gnpl~~aaa~a~l~~~i~~ 313 (412)
T TIGR02407 256 PDIVCLS--KSISGYGLPLALTLIKPE--L-DVWK--PGEHNG--------------TF-RGNNLAFVTATAALEYYWSD 313 (412)
T ss_pred CCEEEec--hhccCCccceeEEEEchh--h-hccC--CCccCC--------------CC-CccHHHHHHHHHHHHHHhcc
Confidence 7887765 99875 455788887654 2 2211 100000 11 1111122233455553 433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcC----CCCeEEecCCC-ceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHH
Q 046506 181 ANLRHFLRSHVNMAKLFERLVGS----DKRFEVVFPRH-FAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLE 255 (310)
Q Consensus 181 ~~~~~~~~~~~~~a~~l~~~L~~----~~~~~v~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 255 (310)
+ +..++..++.++++++|++ .+++. ...+. ..++.+.+.+ ......+..
T Consensus 314 ~---~l~~~~~~~g~~l~~~l~~l~~~~~~~~-~~vrg~Gl~~~l~l~~----------------------~~~~~~~~~ 367 (412)
T TIGR02407 314 D---AFEKAVQRKSEIIQERLDRIVAEYPELI-KQVRGRGLMQGIECGD----------------------GDLAGKIAK 367 (412)
T ss_pred c---HHHHHHHHHHHHHHHHHHHHHhhCCCce-EeeecceeEEEEEecC----------------------hHHHHHHHH
Confidence 2 3445555566666665543 44332 22222 3344555543 123356777
Q ss_pred HHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 256 SINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 256 ~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
.+.++|.+. .+.. .+..+||++++ ...|++|++.++++|++.+.
T Consensus 368 ~~~~~Gv~v-~~~~-~~~~~lr~~p~-l~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 368 AAFENGLII-ETSG-PNDEVIKLLPP-LTIDEETLQQGLDILEQAVE 411 (412)
T ss_pred HHHHCCCEE-eccC-CCCCEEEEECC-CCCCHHHHHHHHHHHHHHHh
Confidence 888888654 3221 12468999955 67999999999999998764
No 281
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.27 E-value=7e-10 Score=104.35 Aligned_cols=213 Identities=14% Similarity=0.072 Sum_probs=126.0
Q ss_pred CcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeeeeecccccccccc
Q 046506 44 IPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD 119 (310)
Q Consensus 44 ~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g 119 (310)
....|++.....+.|.+.| +++|.++|++||+++++|.++.+.........-...++ ..|.+++ .|.+++...
T Consensus 221 ~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv-~pDivt~--~K~l~~G~p 297 (441)
T PRK05769 221 EVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGV-EPDIITL--AKAIAGGLP 297 (441)
T ss_pred ceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCC-CCCEEEE--cccccCCcc
Confidence 3557777777788899888 99999999999999999999975433222111001122 2688765 488876555
Q ss_pred eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Q 046506 120 CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFER 199 (310)
Q Consensus 120 ~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~ 199 (310)
.|++..+++ .. .... ... . .++ .+.+....+..++++.+.. +..++..++.++|++
T Consensus 298 ~gav~~~~~-i~-~~~~---~~~---~-----------~T~-~g~p~~~aaa~a~L~~l~~----~~~~~~~~~g~~l~~ 353 (441)
T PRK05769 298 LGAVIGRAE-LM-FLPP---GSH---A-----------NTF-GGNPVAAAAALATLEELEE----GLLENAQKLGEYLRK 353 (441)
T ss_pred cEEEEEehh-hh-hcCC---CCC---C-----------CCC-CcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 677766544 22 2111 000 0 011 1112233444455554422 667778888888888
Q ss_pred HHcCCC-CeEEecCC--CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEE
Q 046506 200 LVGSDK-RFEVVFPR--HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAI 276 (310)
Q Consensus 200 ~L~~~~-~~~v~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~i 276 (310)
.|+++. .+.++... ...++.+.+..... ..+ ......+.+.+.++|.+ +.+ .+...+
T Consensus 354 ~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~------------~~~----~~~~~~~~~~~~~~Gil-~~~---~~~~~l 413 (441)
T PRK05769 354 ELKELKEKYEFIGDVRGLGLMIGVELVKDRK------------EPD----PKLRDKVLYEAFKRGLL-LLG---AGKSAI 413 (441)
T ss_pred HHHHHHHhCCCeeeeecceEEEEEEeccCCc------------ccc----HHHHHHHHHHHHhCCcE-Eec---CCCCEE
Confidence 886541 12222221 23345555533200 000 22335677778888854 332 244689
Q ss_pred EEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 277 RFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 277 Ris~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
|++++ ...|++|||++++++++.+..+
T Consensus 414 r~~p~-l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 414 RIIPP-LIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred EEeCC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 99966 5689999999999999988654
No 282
>PLN02672 methionine S-methyltransferase
Probab=99.27 E-value=5.5e-10 Score=113.02 Aligned_cols=264 Identities=13% Similarity=0.137 Sum_probs=147.3
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccC-CcccccCC---hHHHHHHHHHhCcEE
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGT-TAITAVDT---LKPLCDVAKQFGIWV 77 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~-~~~G~~~p---l~~I~~l~~~~g~~l 77 (310)
+++..|.. ++.||+++++++.+|+++|++++++.+ ...+++..++ |++|.+.+ +++|+++|++||+++
T Consensus 794 ~a~~~Ga~---vv~Vpl~~e~gf~lD~d~Le~al~~~~-----~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~V 865 (1082)
T PLN02672 794 AAKFLKAN---FRRIPTKSSDGFKLTAKTLASTLETVK-----KPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARV 865 (1082)
T ss_pred HHHHcCCE---EEEEecccccCCCCCHHHHHHHhccCC-----CCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEE
Confidence 35567776 999999865568999999999996421 1256666665 99999865 777888999999999
Q ss_pred EeecccccccccChh-----hhhhhcCCCC---C-C-eeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccc
Q 046506 78 HVDAAYAGSACICPE-----FRHFIDGVEG---A-D-SFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKA 146 (310)
Q Consensus 78 ~vD~a~~~~~~~~~~-----~~~~~~~~~~---~-D-~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~ 146 (310)
++|.+++...+..+. .......... . . ++..|..|.++.| .-+|+++..++..+...... ..+....
T Consensus 866 IsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~~~-~~~s~~~- 943 (1082)
T PLN02672 866 IIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAFHSA-PGLSRPH- 943 (1082)
T ss_pred EEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHHHh-hhhcCCC-
Confidence 999999643332211 0111111100 0 1 2445888776665 44677766555333222111 0111000
Q ss_pred cccccccCCCCceeccCCCcchHHHHHHHHHhC------HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEE
Q 046506 147 TESKQVVDYKDWQITLSRRFRSLKLWFVLRNYG------VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCF 220 (310)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~ 220 (310)
.....++.+++..+. ...+.+..+...++.+++.+.|.+. ++.+. +|+.+.+.|
T Consensus 944 ------------------~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~v~-~PeGGFfLw 1003 (1082)
T PLN02672 944 ------------------STLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC-GWDVL-EPQGGISMV 1003 (1082)
T ss_pred ------------------cHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEe-cCCcEEEEE
Confidence 001222223332221 1234556666788888999999886 77765 556665544
Q ss_pred EEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE-CCEeEEEEEccCCCCCHHHHHHHHHHHHH
Q 046506 221 RVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVL-GGIYAIRFAAGATLTEERHVMVAWTVVQE 299 (310)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~~~~~iRis~~~~~~t~edi~~li~~l~~ 299 (310)
.-.+.-. ..+ .+... +.....+..-..++.+.|.++.++.+.+..+ +..+++|+++. +++++++..++.|++
T Consensus 1004 l~l~~~l-~~~--~~~~~-~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa---~~~e~LeeALerL~k 1076 (1082)
T PLN02672 1004 AKPSAYL-GKT--VKLKS-IDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFA---LEDSEFDRALKAIAR 1076 (1082)
T ss_pred EEccccc-ccc--ccccc-cccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEec---CCHHHHHHHHHHHHH
Confidence 3221000 000 00000 0000000001246777777764455555443 44679999965 478899999999987
Q ss_pred HHH
Q 046506 300 HLE 302 (310)
Q Consensus 300 ~~~ 302 (310)
...
T Consensus 1077 f~~ 1079 (1082)
T PLN02672 1077 FKE 1079 (1082)
T ss_pred HHH
Confidence 654
No 283
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.26 E-value=4.7e-10 Score=104.62 Aligned_cols=242 Identities=13% Similarity=0.096 Sum_probs=139.3
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEE
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVH 78 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~ 78 (310)
+++.+|+. ++.+|..+++++.+|++.+++++.+.+. ...++++..++|++|.+.+ +++|+++|++||++++
T Consensus 140 ~~~~~G~~---~~~v~l~~~~~~~~d~~~l~~~~~~~~~---~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii 213 (404)
T PTZ00376 140 IFKSAGLN---VKEYRYYDPKTKGLDFDGMLEDLRTAPN---GSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPF 213 (404)
T ss_pred HHHHcCCc---eeeccccCcccCCcCHHHHHHHHHhCCC---CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEE
Confidence 35667887 9999984323468999999999975311 1346777889999999866 6678889999999999
Q ss_pred eecccccccccCh--hhhhh--hcCCCCCCeeeeecccccccc-cceEEEE--EeCchhHHhhhccCCcccccccccccc
Q 046506 79 VDAAYAGSACICP--EFRHF--IDGVEGADSFSLNAHKWFFTT-LDCCCLW--VKDPSDLVNSLSTNPEYLKNKATESKQ 151 (310)
Q Consensus 79 vD~a~~~~~~~~~--~~~~~--~~~~~~~D~~~~~~hK~l~~p-~g~g~l~--v~~~~~~~~~~~~~~~y~~~~~~~~~~ 151 (310)
+|.++........ ..... ......-=++..|+.|.++.| .-+|+++ +.++............+.....
T Consensus 214 ~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~----- 288 (404)
T PTZ00376 214 FDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMY----- 288 (404)
T ss_pred EehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhc-----
Confidence 9999865443210 11100 011100115668999999854 5577764 4555432111100000000000
Q ss_pred ccCCCCceeccCCCcchHHHHHHHHHhCH--------HHHHHHHHHHHHHHHHHHHHHcCCC---CeEEecCCCceEEEE
Q 046506 152 VVDYKDWQITLSRRFRSLKLWFVLRNYGV--------ANLRHFLRSHVNMAKLFERLVGSDK---RFEVVFPRHFAVVCF 220 (310)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--------~~~~~~~~~~~~~a~~l~~~L~~~~---~~~v~~~~~~~~v~~ 220 (310)
.+ ...+...++...+.. +.+.+..++..++.+.+.+.|.+.. ++... .+..+...|
T Consensus 289 ---------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-~p~gg~f~~ 355 (404)
T PTZ00376 289 ---------SS---PPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHI-INQIGMFSF 355 (404)
T ss_pred ---------CC---CchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccc-ccCceEEEe
Confidence 00 011222222222321 1234445667778888888888752 23333 344444333
Q ss_pred EEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 221 RVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
+.-. .++.+.|.++.++++.+. + |+|+++ .+.++++.++++|+++
T Consensus 356 -~~~~-------------------------~~~~~~L~~~~~v~v~p~-----~--Ris~~~--~~~~~~~~~~~~l~~~ 400 (404)
T PTZ00376 356 -TGLT-------------------------KEQVERLIEKYHIYLLDN-----G--RISVAG--LTSKNVDYVAEAIHDV 400 (404)
T ss_pred -cCCC-------------------------HHHHHHHHHhCCEeecCC-----C--eEEEec--cCHHhHHHHHHHHHHH
Confidence 2211 245666777745565543 1 999653 6889999999999987
Q ss_pred HH
Q 046506 301 LE 302 (310)
Q Consensus 301 ~~ 302 (310)
+.
T Consensus 401 ~~ 402 (404)
T PTZ00376 401 VR 402 (404)
T ss_pred Hh
Confidence 53
No 284
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.26 E-value=5.3e-10 Score=101.89 Aligned_cols=232 Identities=15% Similarity=0.104 Sum_probs=154.3
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh--CcEEEe
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF--GIWVHV 79 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~--g~~l~v 79 (310)
+|+..|.. ++.||.++ +.+|++.+.+.+.+. +.+|.+..++|+||...+.++|.+++... +.+|+|
T Consensus 115 ~a~~~g~~---~~~v~~~~---~~~d~~~~~~~~~~~------~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVv 182 (356)
T COG0079 115 AAQLAGAE---VVKVPLKE---FRLDLDAILAAIRDK------TKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVI 182 (356)
T ss_pred HHHhcCCe---EEEecccc---cccCHHHHHHhhhcC------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEE
Confidence 35667776 89999984 689999999999874 34888889999999998888877777754 889999
Q ss_pred ecccccccccChhhhhhhcCCCCCC--eeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 80 DAAYAGSACICPEFRHFIDGVEGAD--SFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~~~D--~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
|.|+.-+.- +..-.... ..+ ++.=++.|.++-+ .=+|+ .+.+++.+.......++|--
T Consensus 183 DEAY~eF~~--~~~~~l~~---~~~nlivlRTfSKa~gLAGlRlGy-~ia~~~~i~~l~~vr~p~~v------------- 243 (356)
T COG0079 183 DEAYIEFSP--ESSLELLK---YPPNLIVLRTFSKAFGLAGLRVGY-AIANPELIAALNKVRPPFNV------------- 243 (356)
T ss_pred eCchhhcCC--chhhhhcc---CCCCEEEEEecHHhhhcchhceee-ccCCHHHHHHHHHhcCCCCC-------------
Confidence 999854432 11111111 233 4567899987765 33455 56677665433333333311
Q ss_pred CceeccCCCcchHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHHHHHcCCCCeE-EecCCCceEEEEEEcCCcchhhhhhh
Q 046506 157 DWQITLSRRFRSLKLWFVLRNYGV-ANLRHFLRSHVNMAKLFERLVGSDKRFE-VVFPRHFAVVCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~a~~l~~~L~~~~~~~-v~~~~~~~~v~~~~~~~~~~~~~~~~ 234 (310)
...+..++...+.. +.+++..++..+..+++.+.|++++ +. +. ++..|.+.+.....
T Consensus 244 ----------~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~-pS~aNFvlv~~~~~--------- 302 (356)
T COG0079 244 ----------SSPALAAAIAALRDADYLEESVERIREERERLYAALKALG-LFGVF-PSQANFVLVRVPDA--------- 302 (356)
T ss_pred ----------CHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeec-CCCCcEEEEECCCc---------
Confidence 22233333333322 5678888889999999999999885 54 44 66688887777641
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE-CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESINASGKAYMTHAVL-GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
. ...+.+.|.++|.+.-..... ....++|+++. |+|+-++++++|+++...
T Consensus 303 -------------~-~~~l~~~L~~~giivR~~~~~~~~~~~lRitvg----t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 303 -------------E-AAALAEALLKKGILVRDCSSVGLLPGYLRITVG----TPEENDRLLAALREVLKG 354 (356)
T ss_pred -------------c-HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEEeC----CHHHHHHHHHHHHHHHhc
Confidence 1 246778888888654433221 23569999944 355669999999988753
No 285
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.26 E-value=3.2e-10 Score=110.32 Aligned_cols=258 Identities=15% Similarity=0.142 Sum_probs=145.5
Q ss_pred ecCCCCCCEEEEecCCCCCc---ccCH-----HHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcE
Q 046506 5 IVGIDVKNFRAIKTTKSSSY---GLSP-----DSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIW 76 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~---~id~-----~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~ 76 (310)
+.|+. .+++++..++-| .+++ +.++++|.+..+. .+|+.++++ .+|..|.+-++++|+++| |+.
T Consensus 254 lsga~---PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~-~~p~~vvit-~pTYdGi~yd~~~I~~~~---g~~ 325 (713)
T PRK15399 254 MSDVV---PIWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQA-QWPVHAVIT-NSTYDGLLYNTDWIKQTL---DVP 325 (713)
T ss_pred HcCCe---eEEecccccccCCcCCCChhhccHHHHHHHHHhCCCc-CCceEEEEE-CCCCCceeeCHHHHHHHh---CCC
Confidence 44554 777766543211 3455 9999999876432 245665555 457789999999999999 677
Q ss_pred E-EeecccccccccChhhhhh--hcCCCCCCee---eeecccccccccceEEEEEeCch---hHHhhh----ccCCcccc
Q 046506 77 V-HVDAAYAGSACICPEFRHF--IDGVEGADSF---SLNAHKWFFTTLDCCCLWVKDPS---DLVNSL----STNPEYLK 143 (310)
Q Consensus 77 l-~vD~a~~~~~~~~~~~~~~--~~~~~~~D~~---~~~~hK~l~~p~g~g~l~v~~~~---~~~~~~----~~~~~y~~ 143 (310)
+ |||.||++...+.+.+++. ..+..++|.+ +-|.||++.+..++++++++..- .+.+++ +.+|.|.-
T Consensus 326 ~ilvDEAhgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~a~~m~~STSPsY~L 405 (713)
T PRK15399 326 SIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMMHTSTSPSYPI 405 (713)
T ss_pred EEEEeccchhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHHHHHHHcCCCcHHHH
Confidence 6 7999998887666544321 1111246777 99999999999999999997541 122221 12222211
Q ss_pred ccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCC------eEEecCCCc-e
Q 046506 144 NKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKR------FEVVFPRHF-A 216 (310)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~------~~v~~~~~~-~ 216 (310)
.+++-.+.+.+....-++++++..+.+..+++.|.++++ |+++.+... .
T Consensus 406 ------------------------mASLD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~ 461 (713)
T PRK15399 406 ------------------------VASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDE 461 (713)
T ss_pred ------------------------HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCC
Confidence 112222222332223456778888899999999988766 666643110 0
Q ss_pred EEEEEE-------------------cCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEE
Q 046506 217 VVCFRV-------------------SPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIR 277 (310)
Q Consensus 217 ~v~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iR 277 (310)
.-+|.+ .|..++..+.+..... ..+...--...+.+.|.+.|+ .+..+. ...+=
T Consensus 462 ~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g---~~~~~Gi~g~~l~~~L~e~gI-~~E~~d---~~~vL 534 (713)
T PRK15399 462 AECWPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMDEQG---NMSEEGIPAALVAKFLDERGI-VVEKTG---PYNLL 534 (713)
T ss_pred ccceecCCCcccccccccccccccCCCceEEEEecCccccc---ccccCCCCHHHHHHHHHHcCC-EEEecC---CCeEE
Confidence 001211 1211111111100000 000000111356666766654 443332 22333
Q ss_pred EEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 278 FAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 278 is~~~~~~t~edi~~li~~l~~~~~ 302 (310)
+- .++..|+++++.|+++|.++-+
T Consensus 535 ~l-~s~g~t~~~~~~L~~aL~~f~~ 558 (713)
T PRK15399 535 FL-FSIGIDKTKAMGLLRGLTEFKR 558 (713)
T ss_pred EE-eCCCCCHHHHHHHHHHHHHHHH
Confidence 43 3478999999999999998744
No 286
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.26 E-value=1.1e-09 Score=100.98 Aligned_cols=236 Identities=13% Similarity=0.048 Sum_probs=136.9
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHH-HhCcEEEeec
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAK-QFGIWVHVDA 81 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~-~~g~~l~vD~ 81 (310)
++..|+. ++.++.+++ ++.+|+++|++++++... ..+.+++++..+|++|...+.+++.++++ .+|+++++|.
T Consensus 133 ~~~~g~~---~~~~~~~~~-~~~~d~~~l~~~~~~~~~--~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De 206 (374)
T PRK02610 133 AQTLGIP---VVRVGRDPE-TFEIDLAAAQSAIEQTQN--PPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDE 206 (374)
T ss_pred HHHcCCE---EEEecCCcc-cCCCCHHHHHHHHHhhcC--CCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEec
Confidence 4567777 889998764 478999999999965211 12457777788999999988776655543 1489999999
Q ss_pred ccccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 82 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
++.-.... ..... ..... --++..|..|.++.| .-+|+++ .++..+.........+.
T Consensus 207 ~Y~~~~~~-~~~~~-~~~~~-~~ivi~SfSK~~g~~GlRiG~~v-~~~~l~~~l~~~~~~~~------------------ 264 (374)
T PRK02610 207 AYFEFSQT-TLVGE-LAQHP-NWVILRTFSKAFRLAAHRVGYAI-GHPELIAVLEKVRLPYN------------------ 264 (374)
T ss_pred cccccCcc-chHHH-HhcCC-CEEEEEecchhccCcccceeeee-cCHHHHHHHHHhcCCCC------------------
Confidence 98644211 11111 11110 114668999999654 5567665 45544433221111110
Q ss_pred ccCCCcchHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhcccc
Q 046506 161 TLSRRFRSLKLWFVLRNYG-VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSL 239 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 239 (310)
...+...++...+. .+.+.+.+++..+..+.+.+.|+.++++.+. ++..+.+.+.+....
T Consensus 265 -----~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-p~~g~f~~~~l~~~~------------- 325 (374)
T PRK02610 265 -----LPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQALQELPQLRVW-PSAANFLYLRLSQDA------------- 325 (374)
T ss_pred -----CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEeC-CCcceEEEEeCCCCC-------------
Confidence 01111112222222 2344444444455566778888877787754 555665555554310
Q ss_pred chhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 240 LSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 240 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+ ..++.+.+.+.|... .+ ..+.+|+|+. ++++++.+++.|++++..
T Consensus 326 --~-------~~~~~~~l~~~gi~v-~~----~~~~lRls~~----~~~~~~~~l~~l~~~l~~ 371 (374)
T PRK02610 326 --A-------LAALHQALKAQGTLV-RH----TGGGLRITIG----TPEENQRTLERLQAALTQ 371 (374)
T ss_pred --C-------HHHHHHHHHHCCEEE-Ee----CCCeEEEeCC----CHHHHHHHHHHHHHHHhh
Confidence 0 135666676777543 22 2468999955 246789999888877654
No 287
>PRK06541 hypothetical protein; Provisional
Probab=99.26 E-value=1.2e-09 Score=103.14 Aligned_cols=240 Identities=9% Similarity=0.022 Sum_probs=133.5
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCC
Q 046506 29 DSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGAD 104 (310)
Q Consensus 29 ~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D 104 (310)
+.+++.+... .......|++.-..++.|.+.| +++|.++|++||+++++|.+|.++......+.-...++ ..|
T Consensus 208 ~~l~~~l~~~--~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv-~PD 284 (460)
T PRK06541 208 DRIEEAIEFE--GPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGY-VPD 284 (460)
T ss_pred HHHHHHHHhc--CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCC-CCC
Confidence 6677777542 1112456666666778899888 99999999999999999999954433333211101223 368
Q ss_pred eeeeeccccccccc-ceEEEEEeCchhHHhhhccCC-ccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 105 SFSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLSTNP-EYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 105 ~~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~~~-~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
+++ ..|.+++.+ ..|.+..+++ .. +.+.... .+.... + ..+-+..+++..++++.+..
T Consensus 285 ivt--~gK~l~~G~~pigav~~~~~-i~-~~~~~~~~~~~~~~-------------T-~~gnp~~~aaala~l~~l~~-- 344 (460)
T PRK06541 285 IIT--CAKGITSGYSPLGAMIASDR-LF-EPFLDGPTMFLHGY-------------T-FGGHPVSAAVALANLDIFER-- 344 (460)
T ss_pred EEE--ecccccCCccceeEEEEcHH-HH-HHhhcCCCccccCC-------------C-CCCCHHHHHHHHHHHHHHHh--
Confidence 775 579888533 4677766544 32 2221111 111000 0 01111223333344444432
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCeEEecC--CCceEEEEEEcCCcchhhhhhhhccccchhHHHHHH-HHHHHHHHHHh
Q 046506 183 LRHFLRSHVNMAKLFERLVGSDKRFEVVFP--RHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINE-FNRELLESINA 259 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~l~~ 259 (310)
+...++..++.++|.+.|+++....++.. ....++.+.+..... ...+......+. ....+.+.+.+
T Consensus 345 -~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~ 414 (460)
T PRK06541 345 -EGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKA---------TKETFTDDESERLLRGFLSPALFE 414 (460)
T ss_pred -ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcc---------cccCCcchhhhhhHHHHHHHHHHh
Confidence 34567788888889888877632222111 223445555432100 000000000011 22356677888
Q ss_pred cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 260 SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 260 ~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+|. ++.+. ..+..++|+++. ...|++|||.++++|.+.+..+
T Consensus 415 ~Gi-~~~~~-~~g~~~lrl~Pp-l~~t~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06541 415 AGL-YCRAD-DRGDPVVQLAPP-LISGQEEFDEIEQILRSVLTEA 456 (460)
T ss_pred CCe-EEEec-CCCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHH
Confidence 875 44331 124468999966 6799999999999999998765
No 288
>PRK07049 methionine gamma-lyase; Validated
Probab=99.25 E-value=1.2e-09 Score=102.24 Aligned_cols=153 Identities=11% Similarity=0.089 Sum_probs=102.4
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHH------hCcEEEeecccccccccChhhhhhhcC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQ------FGIWVHVDAAYAGSACICPEFRHFIDG 99 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~------~g~~l~vD~a~~~~~~~~~~~~~~~~~ 99 (310)
.|+++++++|.+.... ..+.+|.+..++|++|.+.|+++|.++|++ ++++++||.++.......+ . .
T Consensus 157 ~d~~~l~~~l~~~~~~-~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~p----l--~ 229 (427)
T PRK07049 157 LSEAAIGAAAEAAAAK-GRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKP----L--E 229 (427)
T ss_pred CCHHHHHHHHHhhccC-CCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCc----c--c
Confidence 5778899888653211 125688888999999999999999999988 8999999999754432111 1 1
Q ss_pred CCCCCeeeeeccccccc-ccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHh
Q 046506 100 VEGADSFSLNAHKWFFT-TLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNY 178 (310)
Q Consensus 100 ~~~~D~~~~~~hK~l~~-p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 178 (310)
.++|+++.|++|++++ +.-.+++++.+++........... + +........|.+++.+
T Consensus 230 -~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~-~--------------------g~~ls~~~a~l~~r~L 287 (427)
T PRK07049 230 -HGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSA-I--------------------GTQLDPHSCWMLGRSL 287 (427)
T ss_pred -cCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHh-c--------------------CCCCCHHHHHHHHcCC
Confidence 1589999999999995 322233445555443222111100 0 1112334455555433
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEE
Q 046506 179 GVANLRHFLRSHVNMAKLFERLVGSDKRFEV 209 (310)
Q Consensus 179 ~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v 209 (310)
+.+..++++..++++.+.+.|++.|++.-
T Consensus 288 --~tl~~R~~~~~~~a~~la~~L~~~p~V~~ 316 (427)
T PRK07049 288 --ETLVLRMERANRNARAVAEFLRDHPKVEK 316 (427)
T ss_pred --ChHHHHHHHHHHHHHHHHHHHHhCCCccE
Confidence 56788889999999999999999988853
No 289
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.23 E-value=1.8e-09 Score=99.10 Aligned_cols=246 Identities=12% Similarity=0.031 Sum_probs=134.1
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEeecccccc-cccCh-------
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVDAAYAGS-ACICP------- 91 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD~a~~~~-~~~~~------- 91 (310)
+|.+|+++|+++|++...+. .+....-..+++..|.+.| +++++++|++||+++|+|||.-+. +++..
T Consensus 164 kG~~dl~~le~~I~~~g~~~-i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~ 242 (467)
T TIGR02617 164 KGNFDLEGLERGIEEVGPNN-VPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYK 242 (467)
T ss_pred CCCcCHHHHHHHHhhcCCCC-ceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhc
Confidence 46899999999998642221 1222222223444566544 778899999999999999998653 32211
Q ss_pred --hhhhhhcC-CCCCCeeeeecccccccccceEEEEEeCc---hhHHhhhccCCccccccccccccccCCCCceeccCCC
Q 046506 92 --EFRHFIDG-VEGADSFSLNAHKWFFTTLDCCCLWVKDP---SDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR 165 (310)
Q Consensus 92 --~~~~~~~~-~~~~D~~~~~~hK~l~~p~g~g~l~v~~~---~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 165 (310)
..++.... ..++|++++|+.|.+++|.|+ ++..+++ +++.+.....+.|-+ .+.| ||..
T Consensus 243 ~~si~eI~rE~~~~aDsvt~slsKglgApvGg-~Lag~d~~~~~l~~~~~~~~i~~EG--------f~tY------GGla 307 (467)
T TIGR02617 243 NWSIEQITRETYKYADMLAMSAKKDAMVPMGG-LLCFKDDSFFDVYTECRTLCVVQEG--------FPTY------GGLE 307 (467)
T ss_pred CCCHHHHHHHhhccCCEEEEEcCCCCCCcccc-eEEecchhHHHHHHHHHhhcccccC--------CcCc------Cchh
Confidence 11111111 257999999999999999765 4445555 444443222222211 1111 1111
Q ss_pred cchHHHHH-HHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHH
Q 046506 166 FRSLKLWF-VLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEE 244 (310)
Q Consensus 166 ~~~~~~~~-~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
.+.+.+.+ .|... .-+..+++-..-.++|.+.|.+- |+.+.. +...-+.+.....- - .-|..
T Consensus 308 grd~ea~a~Gl~e~---~~~~yl~~ri~qv~yl~~~L~~~-Gvpi~~-~Gghav~iDa~~~l-----p-----hip~~-- 370 (467)
T TIGR02617 308 GGAMERLAVGLYDG---MNLDWLAYRINQVQYLVNGLEEI-GVVCQQ-AGGHAAFVDAGKLL-----P-----HIPAD-- 370 (467)
T ss_pred HHHHHHHHhhhhhc---ccHHHHHHHHHHHHHHHHHHHhC-CCcEEe-cCccEEEEehhhhC-----C-----CCChh--
Confidence 11221111 22211 22445555566678888888875 888875 55444433222100 0 00011
Q ss_pred HHHHHHHHHHHHHHh-cCcEEEE-EeE-----EC-------CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 245 RINEFNRELLESINA-SGKAYMT-HAV-----LG-------GIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 245 ~~~~~~~~l~~~l~~-~g~~~~~-~~~-----~~-------~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+--.+.+.-.|.. .|+-.+. ++. ++ ....+|+.+..---|.+++|.+.+++..+.+.
T Consensus 371 --~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 371 --QFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred --hCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 1111344444443 3332222 111 11 14689999886667889999999999998864
No 290
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.23 E-value=1.2e-09 Score=100.80 Aligned_cols=214 Identities=14% Similarity=0.108 Sum_probs=121.0
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
.|++++++.+.+. ...|++....+++|.+.| +++|.++|+++|+++++|++|.+.............++
T Consensus 153 ~dl~~l~~~l~~~------~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~- 225 (375)
T PRK04260 153 NDLNSVKALVNKN------TAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGI- 225 (375)
T ss_pred CCHHHHHHhcCCC------eEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCC-
Confidence 4789999888532 347777777888888765 89999999999999999999864322221111001122
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
..|++ +..|.++...-.|+++.+++ .. +.+... .+.. ++ .+-+..+..+.++++.+..+
T Consensus 226 ~pdi~--t~sK~l~~G~~ig~~~~~~~-~~-~~~~~~-~~~~---------------t~-~~~~~~~~aa~a~l~~~~~~ 284 (375)
T PRK04260 226 EPDIF--TLAKGLANGVPVGAMLAKSS-LG-GAFGYG-SHGS---------------TF-GGNKLSMAAASATLDIMLTA 284 (375)
T ss_pred CCCEE--EecccccCCcceEEEEEcHH-HH-hhcCCC-CCCC---------------CC-CcCHHHHHHHHHHHHHHHhh
Confidence 25754 67898874344677776543 22 222110 0000 11 11112233344444443322
Q ss_pred HHHHHHHHHHHHHHHHHHHH----cCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLV----GSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESI 257 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L----~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (310)
+..++..+..+++++.| .+.+.+..+.. ....+.+.+... ...+.+.+
T Consensus 285 ---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~~~~~~~~~------------------------~~~~~~~l 336 (375)
T PRK04260 285 ---GFLEQALENGNYLQEQLQKALQDKETVTTVRG-LGYMIGIETTAD------------------------LSQLVEAA 336 (375)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHhhCCCeeEEec-cceEEEEEecCc------------------------HHHHHHHH
Confidence 33344444455544444 43332222211 344455544221 13567778
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
.++|.+. .+. +...+|++++ ...+++||+++++.|+++
T Consensus 337 ~~~Gi~v-~~~---~~~~lR~~~~-~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 337 RDKGLIV-LTA---GTNVIRLLPP-LTLTKEEIEQGIAILSEV 374 (375)
T ss_pred HhCCCEE-ecC---CCCEEEEcCC-CccCHHHHHHHHHHHHHh
Confidence 7888644 322 4478999965 468899999999999764
No 291
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.22 E-value=1.8e-09 Score=100.60 Aligned_cols=225 Identities=9% Similarity=0.032 Sum_probs=128.8
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|++.+++.+... .+.+++++-.....|.+.| +++|.++|++||+++++|.++.+............. +
T Consensus 175 d~~~l~~~~~~~-----~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~---~ 246 (408)
T PRK04612 175 DVEALEAAMAGG-----DVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQE---Q 246 (408)
T ss_pred CHHHHHHhhCCC-----CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhc---C
Confidence 678888888521 2334444433333444442 899999999999999999999754332221111111 2
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
+.....+..|.+++....|++..+++ .. +.+... .+ . .++. +-+..+..+.++++.+..
T Consensus 247 ~~pdi~t~~K~l~~G~piga~~~~~~-~~-~~~~~~-~~---~------------~t~~-~~p~~~aaa~a~L~~~~~-- 305 (408)
T PRK04612 247 VTPDIVTLAKALGGGFPIGAMLAGPK-VA-ETMQFG-AH---G------------TTFG-GNPLAAAVARVALRKLAS-- 305 (408)
T ss_pred CCCCEEEEcchhcCCCceEEEEECHH-HH-hhhcCC-Cc---C------------CCCC-CCHHHHHHHHHHHHHHHh--
Confidence 33334455898875445677765533 32 332110 00 0 0111 222334444555554432
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC-CCeEEecC--CCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh
Q 046506 183 LRHFLRSHVNMAKLFERLVGSD-KRFEVVFP--RHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA 259 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 259 (310)
+++.++..++.+++++.|+++ ..+.++.. ....++.+.+.+.. ......+.+.+.+
T Consensus 306 -~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~--------------------~~~a~~i~~~l~~ 364 (408)
T PRK04612 306 -PQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAH--------------------AGQAGAILDLAAE 364 (408)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCch--------------------hhHHHHHHHHHHH
Confidence 456777888888888888764 12222221 12334455543310 1223467777888
Q ss_pred cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 260 SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 260 ~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
+|.+. .+ .+...+|++++ ...+++||+.+++++++.+..+.+
T Consensus 365 ~Gvlv-~~---~g~~~lRl~Pp-l~it~eeid~~l~~l~~~l~~~~~ 406 (408)
T PRK04612 365 HGLLL-LQ---AGPDVLRFVPA-LNLTDAELADGLARLRLALADYVA 406 (408)
T ss_pred CCeEE-ee---CCCCEEEEcCC-ccCCHHHHHHHHHHHHHHHHHHhh
Confidence 88543 32 24578999955 679999999999999999877654
No 292
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.22 E-value=2.3e-09 Score=94.84 Aligned_cols=255 Identities=13% Similarity=0.128 Sum_probs=156.5
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccC---ChHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVD---TLKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~---pl~~I~~l~~~~g~~l~v 79 (310)
|...||+ |++.+.-|..+|.+|++.+|.+++++| +.+++..++|..|.+. -+++|+++|+++|++++.
T Consensus 167 a~~~~lE---VR~ydlLPe~~weIDL~~veal~DENT------~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIa 237 (447)
T KOG0259|consen 167 AIYSGLE---VRYYDLLPEKDWEIDLDGVEALADENT------VAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIA 237 (447)
T ss_pred hhhcCce---eEeecccCcccceechHHHHHhhccCe------eEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEe
Confidence 5667888 888887776689999999999999986 3777778889999874 499999999999999999
Q ss_pred ecccccccccChhhhhh--hcCCCCCCeee-eecccccccc-cceEEEEEeCchh-HHhhhccCCccccccccccccccC
Q 046506 80 DAAYAGSACICPEFRHF--IDGVEGADSFS-LNAHKWFFTT-LDCCCLWVKDPSD-LVNSLSTNPEYLKNKATESKQVVD 154 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~--~~~~~~~D~~~-~~~hK~l~~p-~g~g~l~v~~~~~-~~~~~~~~~~y~~~~~~~~~~~~~ 154 (310)
|..++-..+....+-+. ... .+-+++ .+..|.+..| --.|.+.+.++.- +++. ..+. +..+
T Consensus 238 DEVY~~~vfg~~pfvpmg~fss--iVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~-----~~~q-------~~~~ 303 (447)
T KOG0259|consen 238 DEVYGHTVFGDKPFVPMGKFSS--IVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDT-----KVVQ-------GIKN 303 (447)
T ss_pred hhhcceeecCCCCccchhhccc--cCceEeecccccccccCCceeeeEEEecccccccch-----HHHH-------HHHH
Confidence 99985444333221110 111 244444 4557776666 3467787777632 1110 0000 0000
Q ss_pred CCCceeccCCC--cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCce-EEEEEEcCCcchhhh
Q 046506 155 YKDWQITLSRR--FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFA-VVCFRVSPSAVMDKL 231 (310)
Q Consensus 155 ~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~-~v~~~~~~~~~~~~~ 231 (310)
+.+.. ..+ +-..++...|+.--++=++....-...++..-.+.|+++|++...-.|+.. .+.+.+.-...
T Consensus 304 ~~~~~---~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~---- 376 (447)
T KOG0259|consen 304 FLDII---PGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLF---- 376 (447)
T ss_pred HHhcc---CCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhhh----
Confidence 00000 001 111222333333233446677777888999999999999999844345443 33333322110
Q ss_pred hhhhccccchhHHHHHHHHHHHHHHHHhcCcEE-EEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 232 KTKYENSLLSEEERINEFNRELLESINASGKAY-MTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~-~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
.+... ..++..+|.++..++ +.++-.+..+++|++++ ...++++...+.|++...+
T Consensus 377 ------------~~~~d-D~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~---~~~~~leea~~Rik~Fc~R 433 (447)
T KOG0259|consen 377 ------------PDIED-DVDFCQKLAREESVICLPGQAFGLKNWLRIVIT---VEEEMLEEAFSRIKEFCDR 433 (447)
T ss_pred ------------ccccc-cHHHHHHHhhhcceEEeccccccCCCeEEEEEc---cChHHHHHHHHHHHHHHHh
Confidence 00011 135666676655554 44445566899999955 5678899999999998854
No 293
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.21 E-value=1.4e-09 Score=102.76 Aligned_cols=247 Identities=11% Similarity=0.089 Sum_probs=151.2
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChH---HHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLK---PLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~---~I~~l~~~~g~~l~v 79 (310)
...+|+. ++.||+|++ .+|+|+||+.+...+. ..+.+.....|++|+..+++ +|.++|++||++++-
T Consensus 196 ~~~~g~~---~~~vp~d~~---G~~~e~le~~~~~~~~----k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIE 265 (459)
T COG1167 196 LEALGAR---VIPVPVDED---GIDPEALEEALAQWKP----KAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIE 265 (459)
T ss_pred HHHcCCc---EEecCCCCC---CCCHHHHHHHHhhcCC----cEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEe
Confidence 3456776 999999975 4999999999987521 23555667779999998876 599999999999999
Q ss_pred ecccccccccChhhhhhhcCC--CCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 80 DAAYAGSACICPEFRHFIDGV--EGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~--~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
|..++-..+....... ...+ .+==++..|+.|.+.....+|++...+. .++...... .....
T Consensus 266 DD~y~el~~~~~p~~~-l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~-~~~~~~~~k-~~~~~------------- 329 (459)
T COG1167 266 DDYYGELRYDGPPPPP-LKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPE-LIEKLLRLK-QAADL------------- 329 (459)
T ss_pred eCcchhhhcCCCCCCC-hHhhCCCCCEEEEeeehhhcccccceeeeeCCHH-HHHHHHHHH-HHhcC-------------
Confidence 9998765544221110 0111 1223577999999987788888865433 333322111 00000
Q ss_pred ceeccCCCcchHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHcCC-C-CeEEecCCCce-EEEEEEcCCcchhhhh
Q 046506 158 WQITLSRRFRSLKLWFVLRNYG--VANLRHFLRSHVNMAKLFERLVGSD-K-RFEVVFPRHFA-VVCFRVSPSAVMDKLK 232 (310)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~a~~l~~~L~~~-~-~~~v~~~~~~~-~v~~~~~~~~~~~~~~ 232 (310)
++-.+....++.-+. -| ...+..+++...+..+.+.+.|.+. + .+.+. .|..+ .+++.+.+. .
T Consensus 330 ----~~s~~~Q~~la~~l~-~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~-~p~gG~flwl~l~~~-~----- 397 (459)
T COG1167 330 ----GPSSLSQAALAAFLL-SGHYDRHLRRLRREYARRRDALLEALAEYLPELATWT-RPEGGLFLWLELPEG-I----- 397 (459)
T ss_pred ----CCChHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeee-cCCceEEEEEEcCCC-C-----
Confidence 000111122222232 23 3345566666666777788888765 3 34444 44444 444444442 1
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHhcCcEEEE-EeEE-C---CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 233 TKYENSLLSEEERINEFNRELLESINASGKAYMT-HAVL-G---GIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~~-~---~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
+ ...+.....++|..... +..+ . ..+.+|+++++ .++++++..+..|.+.+....
T Consensus 398 ---------~-------~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~--~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 398 ---------D-------ARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSS--PSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred ---------C-------HHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCC--CCHHHHHHHHHHHHHHHHHHh
Confidence 1 13566666677765554 2222 1 24599999774 679999999999988887653
No 294
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.21 E-value=2e-09 Score=98.63 Aligned_cols=227 Identities=14% Similarity=0.060 Sum_probs=133.8
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh--CcEEEeec
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF--GIWVHVDA 81 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~--g~~l~vD~ 81 (310)
+..|.+ ++.+|++.++++.++++++++.+. . +.+++++.++|++|.+.+.+++.++++.. ++++++|.
T Consensus 124 ~~~g~~---~~~~~l~~~~~~~~~~~~~~~~~~-~------~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De 193 (357)
T PRK14809 124 RYHHGE---VREYPVSKADDFEQTADTVLDAYD-G------ERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDE 193 (357)
T ss_pred HHcCCe---EEEEecccCcCCCcCHHHHHHhhc-C------CcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEec
Confidence 445666 888888754346778887777652 1 33677778999999999988777776654 78999999
Q ss_pred ccccccccChhhhhhhcCCCCCC-eeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCce
Q 046506 82 AYAGSACICPEFRHFIDGVEGAD-SFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D-~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 159 (310)
+++....... ....... .-. .+..|..|.++.| .-+|+++.. ++.+........++.
T Consensus 194 ~y~~~~~~~~-~~~~~~~--~~~vi~~~SfSK~~~~~GlRiG~~~~~-~~~~~~~~~~~~~~~----------------- 252 (357)
T PRK14809 194 AYGEFAERPS-AVALVEE--RDDVAVLRTFSKAYGLAGLRLGYAVVP-EEWADAYARVNTPFA----------------- 252 (357)
T ss_pred hhhhccCCch-hHHHHhh--CCCEEEEecchhHhcCcchhheeeecC-HHHHHHHHHhCCCCC-----------------
Confidence 9865432111 0001110 112 4557899999754 456777654 434433321111110
Q ss_pred eccCCCcchHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccc
Q 046506 160 ITLSRRFRSLKLWFVLRNYG-VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENS 238 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 238 (310)
...+...+++..+. .+.+++..+...+..+.+.+.|... .. ++..+.+.+.+...
T Consensus 253 ------~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~-~~~g~f~~~~~~~~------------- 308 (357)
T PRK14809 253 ------ASELACRAGLAALDDDEHVERTVETARWAREYIREELDAP----TW-ESAGNFVLAEVGDA------------- 308 (357)
T ss_pred ------CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCc----cC-CCCCCEEEEECCCH-------------
Confidence 11222333333332 3445666666666667777777542 12 45566665554221
Q ss_pred cchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 239 LLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
.++.+.+.+.|.....+......+++|+++. ++++++.++++|++++
T Consensus 309 ------------~~~~~~l~~~gv~v~~g~~f~~~~~iRls~~----~~~~~~~~l~~L~~~l 355 (357)
T PRK14809 309 ------------SAVAEAAQERGVIVRDCTSFGLPECIRITCG----TREETERAVEVLNEVL 355 (357)
T ss_pred ------------HHHHHHHHHCCEEEEECccCCCCCeEEEecC----CHHHHHHHHHHHHHHh
Confidence 3566667667654444333333578999954 3689999999998765
No 295
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.20 E-value=1.6e-09 Score=95.36 Aligned_cols=249 Identities=13% Similarity=0.085 Sum_probs=152.4
Q ss_pred EecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhh
Q 046506 16 IKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRH 95 (310)
Q Consensus 16 v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~ 95 (310)
-.+|++ +|-||.|.||+.-... +|.++++ +.+..-...+..++.++|.+.|+.|+.|.||-.+........
T Consensus 167 Ykv~~~-TG~IDYD~Le~~A~~f-----rPk~iia--G~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vip- 237 (477)
T KOG2467|consen 167 YKVDPS-TGYIDYDKLEKTATLF-----RPKLIIA--GTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIP- 237 (477)
T ss_pred eeeCCC-CCceehHHHHHHHHhc-----CCcEEEe--ccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCC-
Confidence 345664 5689999999886654 3655544 333344567899999999999999999999955543222111
Q ss_pred hhcCCCCCCeeeeecccccccccceEEEEEeCch-hHHhhhccCCccccccccccccccCC-CCceeccCCC-cchHHHH
Q 046506 96 FIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPS-DLVNSLSTNPEYLKNKATESKQVVDY-KDWQITLSRR-FRSLKLW 172 (310)
Q Consensus 96 ~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~-~~~~~~~~~~~y~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~ 172 (310)
.-+++||+++.+.||.|.+|.|.=+|| |..- .....-.....|-.. .-++. ..-.+|+|-. -.+.+++
T Consensus 238 --sPFey~DiVTTTTHKsLRGPRg~mIFy-RkGvk~~~~k~g~~i~ydlE------~kINfaVFP~lQGGPHNhtIaalA 308 (477)
T KOG2467|consen 238 --SPFEYCDIVTTTTHKSLRGPRGAMIFY-RKGVKSIKPKQGKEILYDLE------DKINFAVFPGLQGGPHNHTIAALA 308 (477)
T ss_pred --CcccccceeeccccccccCCcceeEEE-eccCCcCCCCCCCcceechh------hhhhhhccccccCCCCcchHHHHH
Confidence 123579999999999999998755554 4321 110000001111111 11121 2234566533 4556777
Q ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC-CCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHH
Q 046506 173 FVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP-RHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNR 251 (310)
Q Consensus 173 ~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (310)
.+|++.....+.+..++..++++.|.+.|.+. |++++.. .+..++.+.+.+..+. ....+
T Consensus 309 vALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlvLvDLr~~G~d------------------GarvE 369 (477)
T KOG2467|consen 309 VALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTGGTDNHLVLVDLRPKGVD------------------GARVE 369 (477)
T ss_pred HHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCccceEEEEeccccCCc------------------hHHHH
Confidence 78888888899999999999999999999986 9998854 5677888888886432 11112
Q ss_pred HHHHHHH--hcCcEEEEEeEECCEeEEEEEc---cCCCCCHHHHHHHHHHHHHHH
Q 046506 252 ELLESIN--ASGKAYMTHAVLGGIYAIRFAA---GATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 252 ~l~~~l~--~~g~~~~~~~~~~~~~~iRis~---~~~~~t~edi~~li~~l~~~~ 301 (310)
.+.+.+. .+.+....-...-..+.||+-- ++-...|+|++++.+-|.+.+
T Consensus 370 ~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av 424 (477)
T KOG2467|consen 370 KVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAV 424 (477)
T ss_pred HHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHH
Confidence 2222211 1111111111111245678752 233456789888888776554
No 296
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.20 E-value=2.7e-09 Score=100.85 Aligned_cols=234 Identities=10% Similarity=0.039 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCC
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGAD 104 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D 104 (310)
+++|++.|... + ....|++.-..++.+.+.| +++|.++|++||+++++|.++.+....+..+.....++ ..|
T Consensus 217 ~~~l~~~i~~~---~-~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv-~PD 291 (459)
T PRK06082 217 ADYLEYVIEKE---G-GIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGI-EPD 291 (459)
T ss_pred HHHHHHHHhcC---C-CEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCC-CCC
Confidence 35677777532 1 2445666555555333455 89999999999999999999976544433211111233 378
Q ss_pred eeeeeccccccccc-ceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHH
Q 046506 105 SFSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANL 183 (310)
Q Consensus 105 ~~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 183 (310)
+++ ..|.+++.+ ..|.+..++. . ...+. ..+.. .++ ++-+..+.+..++++.+..
T Consensus 292 iv~--~gKgl~gG~~P~~av~~~~~-i-~~~~~--~~~~~--------------~T~-~gnpl~~aaa~a~L~~l~~--- 347 (459)
T PRK06082 292 ILC--IGKGLGGGLVPIAAMITKDK-Y-NTAAQ--ISLGH--------------YTH-EKSPLGCAAALATIEVIEQ--- 347 (459)
T ss_pred EEE--ecccccCCCCcceEEEEcHH-H-Hhhcc--CCCCC--------------CCC-CcCHHHHHHHHHHHHHHHh---
Confidence 887 579888642 4677766544 2 22211 00000 011 1112223344455554433
Q ss_pred HHHHHHHHHHHHHHHHHHcCC-CCeEEecCC--CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhc
Q 046506 184 RHFLRSHVNMAKLFERLVGSD-KRFEVVFPR--HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINAS 260 (310)
Q Consensus 184 ~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 260 (310)
+...++..++.++|++.|+++ ....++... ....+.+.+..... ...+ . ......+...+.++
T Consensus 348 ~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~---------~~~~-~----~~~~~~~~~~~~~~ 413 (459)
T PRK06082 348 EGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRH---------TKER-A----YDEAEAVLYRCLNN 413 (459)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCcc---------ccCc-c----HHHHHHHHHHHHhC
Confidence 246777778888888888764 122222221 23344455532100 0000 0 12335666777788
Q ss_pred CcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhhccC
Q 046506 261 GKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLSASK 309 (310)
Q Consensus 261 g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~~~~ 309 (310)
|.+. .+. +..++|+++. ...|++||+.+++++.+.+.++.+.+.
T Consensus 414 Gvl~-~~~---~~~~i~~~Pp-l~it~~eid~~~~~l~~~l~~~~~~~~ 457 (459)
T PRK06082 414 GLSF-KVS---QGNVIQLSPP-LIITREELTQALAILEEAIAKICQDFN 457 (459)
T ss_pred CCEE-Eec---CCCEEEEeCC-CccCHHHHHHHHHHHHHHHHHHhhhcc
Confidence 8644 322 3468999955 458999999999999999988766554
No 297
>PRK06105 aminotransferase; Provisional
Probab=99.20 E-value=3.1e-09 Score=100.44 Aligned_cols=242 Identities=8% Similarity=0.006 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCC
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGA 103 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 103 (310)
.+++|++|.... ...+..|++.-.....|.+.| ++++.++|++||+++++|.++.+.......+.....++ ..
T Consensus 204 ~~~le~~~~~~~--~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v-~P 280 (460)
T PRK06105 204 ANELEALILAEG--PDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGI-KP 280 (460)
T ss_pred HHHHHHHHHHcC--CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCC-CC
Confidence 467888875321 113456777666777788877 99999999999999999999965544333221111233 37
Q ss_pred Ceeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 104 DSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 104 D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
|++++ .|.+++. ...|.+..+++ .. +.+........... ...+ .++-+..+.+..++++.+.+
T Consensus 281 Di~~~--gK~lggG~~P~~av~~~~~-i~-~~~~~~~~~~~~~~---------h~~T-~~gnpl~~aaa~a~L~~i~~-- 344 (460)
T PRK06105 281 DILVM--SKQLSSSYQPLSAVLMNEK-VY-DPIADESGKIGTFG---------HGFT-ASGHPVAAAVALENLAIIEE-- 344 (460)
T ss_pred Ceeee--ecccccCcccceEEEEcHH-HH-HHHhcccccCcccc---------cCCC-CCCCHHHHHHHHHHHHHHHh--
Confidence 87765 6888753 23566666543 32 33321110000000 0000 11112233334455555533
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCeEEecCC--CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhc
Q 046506 183 LRHFLRSHVNMAKLFERLVGSDKRFEVVFPR--HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINAS 260 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 260 (310)
++..++..++.++|++.|+++....++... ...+..+.+..... ...+.+ ........+...+.++
T Consensus 345 -~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~---------~~~~~~--~~~~~a~~i~~~~~~~ 412 (460)
T PRK06105 345 -RDLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVELVADKA---------TKTPFE--PPGKVGARANAAAHEH 412 (460)
T ss_pred -ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcc---------cCCCCC--chhHHHHHHHHHHHHC
Confidence 356777888888888888765333322221 12334455432110 000000 0022334677777788
Q ss_pred CcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 261 GKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 261 g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
|.+. .+. ..++|++++ ...|++|||.+++.+.+.+.++..
T Consensus 413 Gvl~-~~~----g~~i~l~Pp-l~it~~eid~~~~~l~~~l~~~~~ 452 (460)
T PRK06105 413 GVIS-RAM----GDTLAFCPP-LIITAAQVDEMVDRFGRALDDVAA 452 (460)
T ss_pred CeEE-Eec----CCEEEEECC-CccCHHHHHHHHHHHHHHHHHHHH
Confidence 8544 332 248999955 468999999999999999987654
No 298
>PRK07678 aminotransferase; Validated
Probab=99.19 E-value=3.3e-09 Score=100.08 Aligned_cols=237 Identities=11% Similarity=0.083 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCe
Q 046506 30 SLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADS 105 (310)
Q Consensus 30 ~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~ 105 (310)
.+++.|.... ...+..|++.-.....|.+.| ++++.++|++||+++++|..+.++......+.-...++ ..|+
T Consensus 201 ~l~~~~~~~~--~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv-~PDi 277 (451)
T PRK07678 201 EIDRVMTWEL--SETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGV-KPDI 277 (451)
T ss_pred HHHHHHHhcC--CCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCC-CCCE
Confidence 3566665321 122445666555555677766 89999999999999999999966544332211111233 3798
Q ss_pred eeeecccccccc-cceEEEEEeCchhHHhhhccCCcc--ccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 106 FSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEY--LKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 106 ~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
+++ .|.+++. ...|.+.++++ .. +.+.....+ ....+ + -++-+..+++..++++.+..+
T Consensus 278 vt~--gK~lggG~~Pi~av~~~~~-i~-~~~~~~~~~~~~~h~~------------T-~~gnp~~~aaa~a~l~~l~~~- 339 (451)
T PRK07678 278 ITM--AKGITSAYLPLSATAVKKE-IY-EAFKGKGEYEHFRHVN------------T-FGGNPAACALALKNLEIMENE- 339 (451)
T ss_pred EEe--ecccccCCcceeEEEEcHH-HH-HHHhccCcccccccCC------------C-CCcCHHHHHHHHHHHHHHHhC-
Confidence 877 7988764 35777777654 32 333211100 00000 1 111122334444555555333
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC-CCeEEecC-C-CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh
Q 046506 183 LRHFLRSHVNMAKLFERLVGSD-KRFEVVFP-R-HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA 259 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~-~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 259 (310)
.+.++..++.++|++.|.++ ....++.. . ...++.+.+..... ...+.+ ......+...+.+
T Consensus 340 --~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~---------~~~~~~----~~~a~~i~~~l~~ 404 (451)
T PRK07678 340 --NLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKE---------TKEPAD----NDKVASVVAACKE 404 (451)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCc---------ccCcCc----hHHHHHHHHHHHH
Confidence 45666667777777777532 12221111 1 23344454432100 000001 1234567778888
Q ss_pred cCcEEEEEe---EECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 260 SGKAYMTHA---VLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 260 ~g~~~~~~~---~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+|.+. .+. +..+..++|++++ ...|++|||.+++++.+.+.++
T Consensus 405 ~Gv~~-~~~g~~v~~~~~~lrl~Pp-l~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 405 KGLII-GKNGDTVAGYNNVLTLSPP-LVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred CCcEE-eecCccccCCCCEEEEECC-CcCCHHHHHHHHHHHHHHHHhc
Confidence 88544 321 1233578999966 4689999999999999888664
No 299
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.19 E-value=4e-09 Score=96.86 Aligned_cols=234 Identities=11% Similarity=-0.009 Sum_probs=135.2
Q ss_pred ceecCCCCCCEEEEecCCCCCc---ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSY---GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~---~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~v 79 (310)
++..|+. ++.+|.++++.+ ..+++++++... .+.+++++..+|++|.+.+-++|.++|+++++ +++
T Consensus 114 ~~~~g~~---~~~v~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~Ii 182 (360)
T PRK07392 114 LRAFGAT---VKELPLPLDQPSPGLTLRLQTLPPQLT-------PNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVV 182 (360)
T ss_pred HHHcCCe---EEEEecccccCCcccccCHHHHHHhcc-------CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEE
Confidence 4567777 999999865432 245555544321 14478888899999999999999999999985 777
Q ss_pred ecccccccccChhhh--hhhcCCCCCCeeeeeccccccc-ccceEEEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 80 DAAYAGSACICPEFR--HFIDGVEGADSFSLNAHKWFFT-TLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 80 D~a~~~~~~~~~~~~--~~~~~~~~~D~~~~~~hK~l~~-p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
|.++........... ....... -=++..|..|.++. ..-+|+++. ++..++........ ..
T Consensus 183 DE~y~~~~~~~~~~s~~~~~~~~~-~vi~i~S~SK~~~l~GlRiG~~v~-~~~~~~~~~~~~~~----~~---------- 246 (360)
T PRK07392 183 DEAFMDFLPPDAEQSLIPCLAEYP-NLIILRSLTKFYSLPGLRLGYAIA-HPDRLQRWQQWRDP----WP---------- 246 (360)
T ss_pred ECchhhhccCccccchHHHhhcCC-CEEEEEechhhhcCCchheeeeeC-CHHHHHHHHhhCCC----CC----------
Confidence 999865543211000 0011100 11456799999984 456777765 44344332111100 00
Q ss_pred CceeccCCCcchHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhh
Q 046506 157 DWQITLSRRFRSLKLWFVLRNYGV-ANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
...+...++...+.. +..+...+...+..+.+.+.|+.++++.+. ++..+.+.+.+...
T Consensus 247 ---------~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~fl~~~~~~~---------- 306 (360)
T PRK07392 247 ---------VNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTPL-PSAANFLLVQSQGS---------- 306 (360)
T ss_pred ---------CCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCCEEEEEcCCC----------
Confidence 112223333333332 233444556667778888999888888775 34555554443321
Q ss_pred ccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESIN-ASGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
..++...+. +.|.....+.... +.+++|+++.. .++.++|.++|+.+.
T Consensus 307 --------------~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~----~~~~~~l~~al~~~~ 357 (360)
T PRK07392 307 --------------ALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRT----EAENQRLLEALAAIL 357 (360)
T ss_pred --------------HHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCC----HHHHHHHHHHHHHHh
Confidence 135666654 4554444333332 34699999553 456678888887654
No 300
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.19 E-value=1.9e-09 Score=100.93 Aligned_cols=227 Identities=9% Similarity=0.007 Sum_probs=130.9
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEecc-CCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIG-TTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~-~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
+++.|++.|.... .....+++.-. ....|.+.| +++|.++|++||+++++|.+|.+.......+.....++
T Consensus 192 ~l~~l~~~i~~~~---~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv- 267 (429)
T PRK06173 192 AIEPLQDLLEQKG---DEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGV- 267 (429)
T ss_pred HHHHHHHHHHhCC---CcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCC-
Confidence 4677788886321 12445555543 444566533 88999999999999999999955322222211111233
Q ss_pred CCCeeeeeccccccccc-ceEEEEEeCchhHHhhhccCC--ccccccccccccccCCCCceeccCCCcchHHHHHHHHHh
Q 046506 102 GADSFSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLSTNP--EYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNY 178 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~~~--~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 178 (310)
..|+++ ..|.+++.+ .++.++.+++ .. +.+.... .+.... ++ .+-+..+.+..++++.+
T Consensus 268 ~PDiv~--~gK~l~gG~~p~~a~~~~~~-i~-~~~~~~~~~~~~~~~-------------T~-~g~p~~~aaa~a~l~~i 329 (429)
T PRK06173 268 VPDIMC--IGKALTGGYLTLSATITTEA-IA-QTICSGEAKCFMHGP-------------TF-MANPLACAIAAESIRLL 329 (429)
T ss_pred CCCEEE--eehhhhCCccccceEEecHH-HH-HHHhcCCCCccccCC-------------CC-CcCHHHHHHHHHHHHHH
Confidence 378777 579886542 3555555543 32 3322110 111110 00 11223344555556555
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC--CCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHH
Q 046506 179 GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP--RHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLES 256 (310)
Q Consensus 179 ~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 256 (310)
..+ ...++..++.++|++.|+++.++..+.. -...++.+.+.... ....+.+.
T Consensus 330 ~~~---~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~~----------------------~~~~i~~~ 384 (429)
T PRK06173 330 LES---PWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEPV----------------------NMATLQPR 384 (429)
T ss_pred HhC---CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCcc----------------------cHHHHHHH
Confidence 332 3477778888889888875433332222 13445556664321 12356777
Q ss_pred HHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 257 INASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 257 l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
+.++|. ++.+. + .+||+.+. .-.|++|++.++++|.+.+....+
T Consensus 385 l~e~Gi-~v~~~---g-~~l~~~Pp-l~it~~ei~~~~~~l~~~l~~~~~ 428 (429)
T PRK06173 385 FVEHGI-WVRPF---G-KLVYIMPP-FIISPDELSQLTSGLLRVLKQEYN 428 (429)
T ss_pred HHHCCe-EEEec---C-CEEEEeCC-ccCCHHHHHHHHHHHHHHHHHHhc
Confidence 888875 44332 2 48999955 679999999999999999877654
No 301
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.19 E-value=6e-09 Score=98.38 Aligned_cols=216 Identities=12% Similarity=0.014 Sum_probs=125.3
Q ss_pred cEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeeeeecccccccccce
Q 046506 45 PLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDC 120 (310)
Q Consensus 45 ~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~ 120 (310)
...|++.-.....|.+.| +++|.++|++||+++++|.+|.++......+.....++ ..|++++ .|.+++.++.
T Consensus 223 iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~~--gK~l~gG~pi 299 (457)
T PRK05639 223 VAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEV-KPDLIIF--GKGVASGMGL 299 (457)
T ss_pred eEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCC-CCCEEEe--chhhcCCCcc
Confidence 445666555555676655 88999999999999999999975433333211111234 3898884 7998866667
Q ss_pred EEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Q 046506 121 CCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERL 200 (310)
Q Consensus 121 g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~ 200 (310)
|++..+++ .. +.+. ..+.. ++ ++-+..+.+..++++.+.. +...++..++.++|++.
T Consensus 300 ~av~~~~~-i~-~~~~--~~~~~---------------T~-~g~p~~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~ 356 (457)
T PRK05639 300 SGVIGRKE-LM-DLTS--GSALL---------------TP-AANPVISAAAEATLEIIEE---ENLLKNALKVGEFIKKR 356 (457)
T ss_pred eeEEehHH-HH-hhcC--CCccc---------------CC-CcCHHHHHHHHHHHHHHHH---ccHHHHHHHHHHHHHHH
Confidence 77776544 32 2211 11111 11 1112223344445554433 34566666788888888
Q ss_pred HcCC-CCeEEecCC--CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEE
Q 046506 201 VGSD-KRFEVVFPR--HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIR 277 (310)
Q Consensus 201 L~~~-~~~~v~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iR 277 (310)
|+++ .+..++... ...++.+.+..... .+ + ......+.+.+.++|.+ +.+. ..+..++|
T Consensus 357 L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~-----------~~-~----~~~~~~~~~~~~~~Gv~-~~~~-g~~~~~lr 418 (457)
T PRK05639 357 LLEMKESFEVIGDVRGKGLMIGVEIVKENG-----------KP-D----PELTGKICWRAFELGLI-LPSY-GMFGNVIR 418 (457)
T ss_pred HHHHHHhCCCEEeeccceeEEEEEEecCCC-----------CC-C----HHHHHHHHHHHHhCCeE-Eeec-CCCCCEEE
Confidence 8763 233333221 12334444432110 00 0 22335677778888854 4332 11246899
Q ss_pred EEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 278 FAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 278 is~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
++++ ...|++|+|.++++|.+.+..+.
T Consensus 419 ~~Pp-l~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 419 ITPP-LVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred EeCC-CccCHHHHHHHHHHHHHHHHHHH
Confidence 9966 67999999999999999987763
No 302
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.18 E-value=5.4e-09 Score=98.50 Aligned_cols=217 Identities=12% Similarity=0.064 Sum_probs=123.3
Q ss_pred cEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeeeeecccccccccce
Q 046506 45 PLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDC 120 (310)
Q Consensus 45 ~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~ 120 (310)
...|++.-.....|.+.| +++|.++|++||+++++|.++.+.........-...++ ..|++++ .|.+++....
T Consensus 208 iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv-~pDi~t~--gK~l~~G~p~ 284 (445)
T PRK08593 208 VACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNI-TPDLMSF--GKSLAGGMPM 284 (445)
T ss_pred eEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCC-CCCEeee--cccccCCccc
Confidence 456777767777788777 99999999999999999999865433322111001123 2686654 7887753446
Q ss_pred EEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Q 046506 121 CCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERL 200 (310)
Q Consensus 121 g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~ 200 (310)
|++..+++ .. +.+. ...+... .++.+..+.+..++++.+..+ +..++..++.++|++.
T Consensus 285 gav~~~~~-i~-~~~~-~~~~~~T----------------~~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~ 342 (445)
T PRK08593 285 SAIVGRKE-IM-ESLE-APAHLFT----------------TGANPVSCAAALATIDMIEDE---SLLQRSAEKGEYARKR 342 (445)
T ss_pred EEEEEcHH-HH-hhhc-cCCCCCC----------------CCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHH
Confidence 66666533 33 3321 1111111 011122334445555555332 4566777777777777
Q ss_pred HcCC-CCeEEecC-CC-ceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEE
Q 046506 201 VGSD-KRFEVVFP-RH-FAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIR 277 (310)
Q Consensus 201 L~~~-~~~~v~~~-~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iR 277 (310)
|+++ ....++.. .. ...+.+.+...... .... ......+...+.++|.+. .+. +..++|
T Consensus 343 L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~-----------~~~~---~~~~~~~~~~~~~~Gv~~-~~~---~~~~lr 404 (445)
T PRK08593 343 FDQWVSKYNFVGDVRGYGLSIGIDIVSDKKL-----------KTRD---NEAALKICNYCFEHGVVI-IAV---AGNVLR 404 (445)
T ss_pred HHHHHhcCCcEEEEeccceEEEEEEecCCCc-----------CCCc---HHHHHHHHHHHHHCCeEE-ecc---CCCEEE
Confidence 7653 12222222 11 22333433321000 0000 223356777888888544 221 246899
Q ss_pred EEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 278 FAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 278 is~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
++++ ...|++||+.+++++.+.+..+.
T Consensus 405 ~~p~-l~~t~~~id~~~~~l~~~l~~~~ 431 (445)
T PRK08593 405 FQPP-LVITYEQLDTALNTIEQAFTALE 431 (445)
T ss_pred EECC-CccCHHHHHHHHHHHHHHHHHHh
Confidence 9965 67999999999999999987764
No 303
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.18 E-value=1.2e-09 Score=98.68 Aligned_cols=147 Identities=16% Similarity=0.168 Sum_probs=104.1
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCee
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSF 106 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~ 106 (310)
+++.+++++.+++ .+|-+.+++|++..+.||++|+++||++|+.++||.+.+.+.. .+-.. .+||++
T Consensus 151 ~~~~~~~~i~~~t------~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~-~~pL~------lGADIV 217 (409)
T KOG0053|consen 151 DLKKILKAIKENT------KAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYN-QDPLP------LGADIV 217 (409)
T ss_pred hHHHHHHhhccCc------eEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcccc-cChhh------cCCCEE
Confidence 3577778877754 4899999999999999999999999999999999999977632 22111 259999
Q ss_pred eeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHH
Q 046506 107 SLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLR 184 (310)
Q Consensus 107 ~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 184 (310)
+-|..|++++-.. .|.+..+.++..++..... .++.+ -..++.+|..++ |...+.
T Consensus 218 ~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~-~~lg~--------------------~~~p~~~~ll~R--glktl~ 274 (409)
T KOG0053|consen 218 VHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQ-EDLGW--------------------CEDPFDLFLLSR--GLKTLH 274 (409)
T ss_pred EEeeeeeecCCcceeeeEEecCcHHHHHHHHHHH-HHhcC--------------------CCCHHHHHHHhc--Ccchhh
Confidence 9999999997422 3455555454433332111 11111 123444554443 556778
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCeEE
Q 046506 185 HFLRSHVNMAKLFERLVGSDKRFEV 209 (310)
Q Consensus 185 ~~~~~~~~~a~~l~~~L~~~~~~~v 209 (310)
-++++..+++..+++.|.+.|.++-
T Consensus 275 lRi~~~~ena~~~A~~Le~~~~v~k 299 (409)
T KOG0053|consen 275 LRINKHSENALKIALLLEAHPKVKK 299 (409)
T ss_pred hhHHHHHHHHHHHHHHhhhCCceeE
Confidence 8899999999999999998888873
No 304
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.17 E-value=2e-09 Score=100.94 Aligned_cols=236 Identities=11% Similarity=0.031 Sum_probs=130.3
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
-|++++++.|.+.. .....|++....++.|.+.| +++|.++|++||+++++|.+|.+. ...........++
T Consensus 182 ~d~~~l~~~i~~~~---~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~-r~g~~~~~~~~~~- 256 (426)
T PRK00062 182 NDLEAVEELFEEYG---DEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGF-RVALGGAQGYYGV- 256 (426)
T ss_pred CCHHHHHHHHHhCC---CcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhcc-ccCCccHHHHhCC-
Confidence 37899999986521 13457777777788899988 999999999999999999999744 2221111001122
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhhcc-CCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCH
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLST-NPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGV 180 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 180 (310)
..|++ +..|.+++....|++.. +++.. +.+.. ...+.... .++-+..+.++.++++.+..
T Consensus 257 ~pDi~--~~gK~l~~G~p~ga~~~-~~~i~-~~~~~~~~~~~~~T---------------~~~~p~~~aaa~a~L~~~~~ 317 (426)
T PRK00062 257 TPDLT--TLGKIIGGGLPVGAFGG-RREIM-EQLAPLGPVYQAGT---------------LSGNPLAMAAGLATLKLLKE 317 (426)
T ss_pred CcchH--hhhhHhhCCCcceeeeE-HHHHH-HhhccCCCceeccc---------------CcCCHHHHHHHHHHHHHHhc
Confidence 25654 45698875333566644 44333 33321 11111111 11222334445556665533
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCC---CCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHH
Q 046506 181 ANLRHFLRSHVNMAKLFERLVGSD---KRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESI 257 (310)
Q Consensus 181 ~~~~~~~~~~~~~a~~l~~~L~~~---~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (310)
+ +..++..++.+++++.|+++ -++.........++.+.+.+..... ....... + ......+.+.+
T Consensus 318 ~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~------~~~~~~~--~-~~~~~~i~~~l 385 (426)
T PRK00062 318 P---GFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTN------YADAKKS--D-TERFARFFHAM 385 (426)
T ss_pred c---hHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcc------hhhhccc--c-HHHHHHHHHHH
Confidence 3 45566666777777766532 1332211223445555554321000 0000000 0 12234677788
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.++|. ++.+. +...+|++ ...|++||+.++++|++.+..+
T Consensus 386 ~~~Gv-~v~~~---~~~~~~~~---~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 386 LDEGV-YLAPS---QFEAGFVS---AAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred HHCCe-EeecC---CcCceeee---ccCCHHHHHHHHHHHHHHHHhh
Confidence 88874 44443 22356665 4579999999999999988654
No 305
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.17 E-value=7.4e-09 Score=97.03 Aligned_cols=234 Identities=12% Similarity=0.019 Sum_probs=127.6
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCCh----HHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTL----KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl----~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++|++.|.... ..+..|++....++.|.+.|. ++|.++|++||+++++|.+|.+. ...........++ .
T Consensus 187 d~~~l~~~l~~~~---~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~ga~~~~gv-~ 261 (433)
T PRK00615 187 DFQIFQTVMNSLG---HRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHV-K 261 (433)
T ss_pred CHHHHHHHHHhcC---CceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHhHHHHhcCC-C
Confidence 6799999986432 124577777777888988874 59999999999999999999543 2222111111233 3
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhcc-CCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLST-NPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
.|+++ ..|.+++....|++..+++ .. +.+.. .+.+...+ ..+-+..+.+..++++.+..+
T Consensus 262 PDi~~--~gK~lggG~p~~av~~~~~-i~-~~~~~~~~~~~~~T---------------~~g~p~~~aa~la~L~~i~~~ 322 (433)
T PRK00615 262 PDITV--YGKILGGGLPAAAVVAHKS-IM-DHLAPEGTIFQAGT---------------LSGNPLAMAAGKASINLCREQ 322 (433)
T ss_pred CCeEE--EcccccCCcceeeeeecHH-HH-hhhcCCCCcccCCC---------------CcccHHHHHHHHHHHHHHhcc
Confidence 78766 5898875443566655443 32 33211 11111111 011123344555566655433
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC---CCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHH-HHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSD---KRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEE-RINEFNRELLESI 257 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~---~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l 257 (310)
..+++..++.++|.++|++. .++.+.......++.+.+...... +..+.. .-.+....+...|
T Consensus 323 ---~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r~G~~~~i~~~~~~~~----------~~~~~~~~~~~~~~~~~~~l 389 (433)
T PRK00615 323 ---GFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVRYGSMFSFFFNENRPN----------NLAEAQLSDIEAFQTFYQSA 389 (433)
T ss_pred ---cHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeeceEEEEEEeCCCCC----------ChHHHhhCCHHHHHHHHHHH
Confidence 34566666666665555431 133322112334455555432100 000000 0022335677888
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.++|. ++.+..+.. ..++ ...|++|||++++++.+.++++
T Consensus 390 ~~~Gv-~~~~~~~~~-----~~ls-~~ht~~did~~~~a~~~~~~~~ 429 (433)
T PRK00615 390 FSKGV-YLSPSPFEA-----SFLS-SAHSMENLDYAQNVLIDSLEKV 429 (433)
T ss_pred HHCCe-eecCccccc-----ccee-cCCCHHHHHHHHHHHHHHHHHH
Confidence 88884 444321111 1222 4468999999999999998775
No 306
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.17 E-value=5.7e-09 Score=98.40 Aligned_cols=216 Identities=10% Similarity=0.022 Sum_probs=122.5
Q ss_pred cEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeeeeecccccccccce
Q 046506 45 PLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDC 120 (310)
Q Consensus 45 ~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~ 120 (310)
...|++.-.....|.+.| +++|.++|++||+++++|.++.++......+.....++ ..|.++++ |.+++.+..
T Consensus 220 iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv-~PDiv~~g--K~l~~G~Pi 296 (443)
T PRK06058 220 LAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGI-VPDLITTA--KGIAGGLPL 296 (443)
T ss_pred eEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCC-CCCEEEEc--ccccCCCcc
Confidence 445555555555676655 99999999999999999999876544332221111233 36888884 998865557
Q ss_pred EEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Q 046506 121 CCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERL 200 (310)
Q Consensus 121 g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~ 200 (310)
|.+..+++ .. +.+.. ..... ++ ++-+....+..++++.+.. ++..++..++.++|.++
T Consensus 297 ~av~~~~~-i~-~~~~~--~~~~~--------------T~-~gnpl~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~ 354 (443)
T PRK06058 297 SAVTGRAE-IM-DAPHP--GGLGG--------------TY-GGNPVACAAALAAIETIEE---DDLVARARQIEALMTDR 354 (443)
T ss_pred EEEEEcHH-HH-hhccC--CCCCC--------------CC-CCCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHH
Confidence 77776543 32 32211 00000 11 1111223344445544433 34566666777788887
Q ss_pred HcCC-CCeEEecC--CCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEE
Q 046506 201 VGSD-KRFEVVFP--RHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIR 277 (310)
Q Consensus 201 L~~~-~~~~v~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iR 277 (310)
|+++ ....++.. ....++.+.+..... ..+. ......+...+.++|.+ +.+... ...+||
T Consensus 355 L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~------------~~~~---~~~~~~l~~~~~~~Gv~-~~~~~~-~~~~lr 417 (443)
T PRK06058 355 LRALAAEDDRIGDVRGRGAMIAIELVKPGT------------TEPD---AELTKALAAAAHAAGVI-VLTCGT-YGNVIR 417 (443)
T ss_pred HHHHHhhCCcEEeeeccceEEEEEEecCCC------------CCCc---HHHHHHHHHHHHHCCeE-EeccCC-CCCEEE
Confidence 7653 12222211 233445555533100 0000 22345677777788854 433211 135899
Q ss_pred EEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 278 FAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 278 is~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+.++ .-.|++||+.++++|++.+.+
T Consensus 418 ~~Pp-l~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 418 LLPP-LVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred EECC-CccCHHHHHHHHHHHHHHHHh
Confidence 9855 679999999999999988754
No 307
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.16 E-value=5.8e-09 Score=98.19 Aligned_cols=219 Identities=10% Similarity=0.051 Sum_probs=123.1
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccC----ChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCC
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVD----TLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGA 103 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~----pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 103 (310)
++++++.|... +..+..+++.-.....|.+. .+++|.++|++||+++++|.++.+.......+.--..++ ..
T Consensus 212 ~~~~~~~i~~~---~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~P 287 (443)
T PRK08297 212 LAQARAAFERH---PHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGV-RP 287 (443)
T ss_pred HHHHHHHHHhC---CCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCC-CC
Confidence 45566666542 12355677766666667763 399999999999999999999965543332211111233 37
Q ss_pred CeeeeecccccccccceEEEEEeCch-hHH-hhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 104 DSFSLNAHKWFFTTLDCCCLWVKDPS-DLV-NSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 104 D~~~~~~hK~l~~p~g~g~l~v~~~~-~~~-~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
|++++ .|.+ | .|.+++.++- .+. ..+. .+.+... ++ ++-+....+..++++.+..
T Consensus 288 Div~~--gK~l--~--~~a~l~~~~i~~~~~~~~~-~~~~~~~--------------T~-~gnpl~~aaa~a~L~~l~~- 344 (443)
T PRK08297 288 DIVAF--GKKT--Q--VCGIMAGRRVDEVEDNVFA-VSSRINS--------------TW-GGNLVDMVRARRILEVIEE- 344 (443)
T ss_pred CEEEe--cccc--c--ccceecchHHHHhhhhhcc-CccccCC--------------CC-CccHHHHHHHHHHHHHHHh-
Confidence 98875 6876 3 3444444431 110 1110 0000000 11 1111122333344444432
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC----CCe--EEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSD----KRF--EVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLE 255 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~----~~~--~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 255 (310)
++..++..++.+++++.|+++ |.+ .+. ....++.+.+.. ......+..
T Consensus 345 --~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vr--g~G~~~~i~~~~----------------------~~~~~~~~~ 398 (443)
T PRK08297 345 --DGLVENAARQGEYLLARLEELAAEFPAVVSNVR--GRGLMCAFDLPT----------------------TADRDEVIR 398 (443)
T ss_pred --cCHHHHHHHHHHHHHHHHHHHHHHCCCcceeee--ccceEEEEEecC----------------------HHHHHHHHH
Confidence 356667777777777777653 322 221 234455566543 122346777
Q ss_pred HHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 256 SINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 256 ~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.+.++|.+. .+. +...+||+++ ...|++|+|.++++|.+.+..+
T Consensus 399 ~l~~~Gvl~-~~~---~~~~lr~~P~-l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 399 RLWEEGVLV-LPC---GERSIRFRPA-LTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred HHHHCCEEE-ecC---CCCeEEEECC-ccCCHHHHHHHHHHHHHHHHhh
Confidence 787887543 322 3357999855 6789999999999999988765
No 308
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.16 E-value=2.1e-09 Score=100.36 Aligned_cols=234 Identities=15% Similarity=0.077 Sum_probs=128.4
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEeeccccccccc
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVDAAYAGSACI 89 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD~a~~~~~~~ 89 (310)
++.+|+++++.+.+|+++ + .+.++++..++|++|.+.+ +++|+++|++||+++++|.+++.....
T Consensus 157 ~~~v~~~~~~~~~~d~~~------~------~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~ 224 (409)
T PRK07590 157 IVYLPCTAENNFVPELPE------E------KVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISD 224 (409)
T ss_pred eeEeecccccCCcccCcc------c------CceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccC
Confidence 788888754434444321 1 2446666788899999877 556888899999999999998754321
Q ss_pred ChhhhhhhcCCCCC---Ceeeeecccccccc-cceEEEEEeCchhHHhhhccC-----CccccccccccccccCCCCcee
Q 046506 90 CPEFRHFIDGVEGA---DSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTN-----PEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 90 ~~~~~~~~~~~~~~---D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~-----~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
...... ...+... -++..|+.|.++.| .-+|+++. ++..+....... ..+..... ...
T Consensus 225 ~~~~~~-~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~-~~~li~~~~~~~~~~~~~~~~~~~~-----------~~~ 291 (409)
T PRK07590 225 PSLPHS-IYEIEGARECAIEFRSFSKTAGFTGTRCAYTVV-PKELKGKTSDGEGVSLNSLWNRRQS-----------TKF 291 (409)
T ss_pred CCCCcc-hhhCCCcccceEEEecCccccCCcCceeEEEEc-CHHHhhhccccchhhhHHHHHHHHh-----------hcc
Confidence 111111 1111111 24567999999744 44676665 443432100000 00000000 000
Q ss_pred ccCCCcchHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhcc
Q 046506 161 TLSRRFRSLKLWFVLRNY---GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYEN 237 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 237 (310)
.+ ...+...++...+ +...+++..++..+..+.+.+.|.+. ++++..+..+..+.+.+++..
T Consensus 292 -~~--~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~~g~~f~wi~~~~~~----------- 356 (409)
T PRK07590 292 -NG--VSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESA-GFEVYGGVNAPYIWVKTPDGM----------- 356 (409)
T ss_pred -cC--cCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCcceEEEEECCCCC-----------
Confidence 00 0111222222222 23456667777788888899999886 677654445556666665420
Q ss_pred ccchhHHHHHHHHHHHHHHHHhc-CcEEEEEeEE--CCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 238 SLLSEEERINEFNRELLESINAS-GKAYMTHAVL--GGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
+ ..++...+.++ |.....+... .+.+++|+++. .++++++..++.|.+.
T Consensus 357 ----~-------~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 357 ----S-------SWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAF---GSRENVLEAMERIKKA 408 (409)
T ss_pred ----C-------HHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEcc---CCHHHHHHHHHHHHhh
Confidence 0 13455566544 5433333222 23569999942 4688999998888764
No 309
>PRK06062 hypothetical protein; Provisional
Probab=99.16 E-value=9.6e-09 Score=96.93 Aligned_cols=238 Identities=9% Similarity=-0.019 Sum_probs=132.7
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCC
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGA 103 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 103 (310)
+++|+++|+.. ....+..|++.-...+.|.+.| +++|.++|++||+++++|.+|.++......+.-...++ ..
T Consensus 200 ~~~le~~l~~~--~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv-~P 276 (451)
T PRK06062 200 LAHLERVIELE--GPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGV-VP 276 (451)
T ss_pred HHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCC-CC
Confidence 67888888532 1123456777777777899888 99999999999999999999986544333221112234 37
Q ss_pred Ceeeeeccccccccc-ceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 104 DSFSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 104 D~~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
|++++ .|.+++.+ ..|.+..+++ .. +.+... .+... .++. +-+..+.+..++++.+..+
T Consensus 277 Di~t~--gK~lggG~~Pigav~~~~~-i~-~~~~~~-~~~~~-------------~T~~-gnpl~~Aaa~a~L~~l~~~- 336 (451)
T PRK06062 277 DLITF--AKGVNSGYVPLGGVAISEA-IA-ATFADR-PYPGG-------------LTYS-GHPLACAAAVATINAMEEE- 336 (451)
T ss_pred Ceeee--chhhhcCCcCcEEEEEcHH-HH-HHhccC-CCCCC-------------CCCC-CCHHHHHHHHHHHHHHHhc-
Confidence 87765 79888642 4667766653 33 333211 11100 0111 1122334445555555333
Q ss_pred HHHHHHHHHHHH-HHHHHHHcCC-CCeEEecC-C-CceEEEEEEcCCcchhhhhhhhccccchhHHHH-HHHHHHHHHHH
Q 046506 183 LRHFLRSHVNMA-KLFERLVGSD-KRFEVVFP-R-HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERI-NEFNRELLESI 257 (310)
Q Consensus 183 ~~~~~~~~~~~a-~~l~~~L~~~-~~~~v~~~-~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l 257 (310)
+..++..++. +++++.|+++ ..+.++.. . ...++.+.+..... ...+.+.... ......+.+.+
T Consensus 337 --~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~---------~~~~~~~~~~~~~~~~~~~~~l 405 (451)
T PRK06062 337 --GIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRE---------TREPLAPYGASSAAMAAVKAAC 405 (451)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEccccc---------ccCCCcccchhhHHHHHHHHHH
Confidence 3555555565 4666666543 11222111 1 12234444432100 0000111000 12345677788
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
.++|.+. .+ ..+.+|++++ ..+|++|||.+++++++.+..+.
T Consensus 406 ~~~Gvl~-~~----~~~~lrl~pp-l~~t~~eid~~~~~l~~~l~~~~ 447 (451)
T PRK06062 406 KERGLLP-FV----NGNRIHVVPP-CTVTEDEVREGLAILDAALAVAD 447 (451)
T ss_pred HHCCcEE-ee----cCCEEEEECC-ccCCHHHHHHHHHHHHHHHHHhh
Confidence 8888653 22 1347999855 56899999999999999987764
No 310
>PLN02397 aspartate transaminase
Probab=99.15 E-value=3.6e-09 Score=99.21 Aligned_cols=238 Identities=13% Similarity=0.100 Sum_probs=137.9
Q ss_pred ceecCCCCCCEEEEecC-CCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEE
Q 046506 3 AQIVGIDVKNFRAIKTT-KSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVH 78 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~-~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~ 78 (310)
++..|.. ++.+|.. ++ ++.+|++.+++.+.+.+. +..+++...++|++|.+.+ +++|+++|++||++++
T Consensus 159 ~~~~g~~---~~~v~l~~~~-~~~~d~~~l~~~l~~~~~---~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI 231 (423)
T PLN02397 159 FRDAGVP---VRTYRYYDPK-TRGLDFDGLLEDLKAAPD---GSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPF 231 (423)
T ss_pred HHHcCCe---EEEeecccCc-CCccCHHHHHHHHHhCCC---CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEE
Confidence 3456666 8888873 33 368999999998865311 2457777888999999866 6678889999999999
Q ss_pred eecccccccccCh--hhhhh--hcCCCCCC-eeeeecccccccc-cceEEEE--EeCchhHHhhhccCCccccccccccc
Q 046506 79 VDAAYAGSACICP--EFRHF--IDGVEGAD-SFSLNAHKWFFTT-LDCCCLW--VKDPSDLVNSLSTNPEYLKNKATESK 150 (310)
Q Consensus 79 vD~a~~~~~~~~~--~~~~~--~~~~~~~D-~~~~~~hK~l~~p-~g~g~l~--v~~~~~~~~~~~~~~~y~~~~~~~~~ 150 (310)
+|.++........ ..... ... .+-. ++..|+.|.++.| .-+|+++ ..++..+...............
T Consensus 232 ~De~Y~~l~~~~~~~~~~~~~~~~~-~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~---- 306 (423)
T PLN02397 232 FDSAYQGFASGDLDADAQSVRMFVE-DGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMY---- 306 (423)
T ss_pred EecccCCccCCchhhhhHHHHHHHh-cCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhccc----
Confidence 9999865543110 01110 111 1111 4567999998853 4567764 3344322111100000000000
Q ss_pred cccCCCCceeccCCCcchHHHHHHHHHhCH-----H---HHHHHHHHHHHHHHHHHHHHcCCCC----eEEecCCCceEE
Q 046506 151 QVVDYKDWQITLSRRFRSLKLWFVLRNYGV-----A---NLRHFLRSHVNMAKLFERLVGSDKR----FEVVFPRHFAVV 218 (310)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~---~~~~~~~~~~~~a~~l~~~L~~~~~----~~v~~~~~~~~v 218 (310)
.+ .......++...+.. + .++++.++..+..+.+.+.|+++ + +.+. .|+.+..
T Consensus 307 -----------~~--~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~-~~~~~~~~~-~p~gg~f 371 (423)
T PLN02397 307 -----------SN--PPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEAR-GSPGDWSHI-TKQIGMF 371 (423)
T ss_pred -----------CC--CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCcc-cCCceEE
Confidence 00 011112222222221 1 25667778888889999999887 4 5443 3455444
Q ss_pred EEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHH
Q 046506 219 CFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQ 298 (310)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~ 298 (310)
.|.-.+ .++.++|.++..+++.+ .+ |+++.+ .+++.++.+++.|+
T Consensus 372 l~~~l~--------------------------~~~~~~Ll~~~~V~v~~-----~~--Ri~~~~--~~~~~i~~~~~~i~ 416 (423)
T PLN02397 372 SFTGLN--------------------------KEQVDRMTKEYHIYMTR-----DG--RISMAG--LSSKNVPYLADAIH 416 (423)
T ss_pred EecCCC--------------------------HHHHHHHHHhCCEEECC-----CC--eEEEee--CCHHHHHHHHHHHH
Confidence 332111 23556676665556542 22 999763 78899999999999
Q ss_pred HHHH
Q 046506 299 EHLE 302 (310)
Q Consensus 299 ~~~~ 302 (310)
+++.
T Consensus 417 ~~~~ 420 (423)
T PLN02397 417 AVVT 420 (423)
T ss_pred HHHh
Confidence 8863
No 311
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.14 E-value=1.8e-08 Score=94.92 Aligned_cols=234 Identities=14% Similarity=0.056 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCC
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGA 103 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 103 (310)
++.+++.|..... +..+..|++.-..+.+|.+.| +++|.++|++||+++++|.+|.+.............++ ..
T Consensus 189 ~~~~~~~l~~~~~-~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~-~p 266 (443)
T PRK08360 189 VEYIKEKFEGEVY-AEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGV-EP 266 (443)
T ss_pred HHHHHHHHHhccC-CCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCC-CC
Confidence 4456666643211 123456666656677888766 88999999999999999999975433332111001122 25
Q ss_pred CeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHH
Q 046506 104 DSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANL 183 (310)
Q Consensus 104 D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 183 (310)
|++++ .|.++.....|++..+ ++.. +.+... .+.. ++ ++-+.....+.++++.+..+
T Consensus 267 Diitl--sK~l~~G~pigav~~~-~~i~-~~~~~~-~~~~---------------T~-~~~p~~~aaa~a~l~~l~~~-- 323 (443)
T PRK08360 267 DIITL--GKPLGGGLPISATIGR-AEIM-DSLPPL-AHAF---------------TL-SGNPVASAAALAVIEEIEEK-- 323 (443)
T ss_pred CEEEe--cccccCCceeEEEEEc-HHHH-hhhcCC-CCCC---------------CC-CcCHHHHHHHHHHHHHHHHc--
Confidence 76655 8998854446776654 3333 332110 0110 00 11112234444555544332
Q ss_pred HHHHHHHHHHHHHHHHHHcCC-CCeEEecC--CCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhc
Q 046506 184 RHFLRSHVNMAKLFERLVGSD-KRFEVVFP--RHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINAS 260 (310)
Q Consensus 184 ~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 260 (310)
+..++..++.+++++.|+++ ....++.. ....++.+.+..... + ... + ......+...+.+.
T Consensus 324 -~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~-----------~-~~~-~-~~~~~~~~~~l~~~ 388 (443)
T PRK08360 324 -NLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRE-----------T-KER-A-YEEAAKVVWRAWEL 388 (443)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCc-----------c-cCc-c-HHHHHHHHHHHHHC
Confidence 35667777777787777653 11222221 123344555532100 0 000 0 12234667778888
Q ss_pred CcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 261 GKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 261 g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
|.+ +.+. ...++|++++ ..+|++||+.+++++.+.+..+.+
T Consensus 389 Gi~-~~~~---~~~~lr~~P~-l~~t~~~id~~~~~l~~~l~~~~~ 429 (443)
T PRK08360 389 GLI-VTFF---SGNVLRIQPP-LTIEKEVLDEGLDILEEAIEDVEE 429 (443)
T ss_pred CeE-Eeec---CCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 854 3321 2468999955 679999999999999999987654
No 312
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.13 E-value=6.1e-09 Score=96.87 Aligned_cols=238 Identities=14% Similarity=0.109 Sum_probs=133.0
Q ss_pred ceecCCCCCCEEEEec-CCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEE
Q 046506 3 AQIVGIDVKNFRAIKT-TKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVH 78 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~-~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~ 78 (310)
++.+|+. ++.+|. +++ ++.+|+++|++++.+... +..++++...+|++|.+.+ +++|+++|++||++++
T Consensus 137 ~~~~g~~---~v~v~~~~~~-~~~~d~~~l~~~~~~~~~---~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii 209 (396)
T PRK09257 137 FEAAGLE---VKTYPYYDAA-TKGLDFDAMLADLSQAPA---GDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPF 209 (396)
T ss_pred HHHcCCc---EEEEeccccc-cCccCHHHHHHHHHhCCC---CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEE
Confidence 4567777 999998 333 358999999999874211 1346666888999999866 6678899999999999
Q ss_pred eecccccccccCh-hhhhh--hcCCCCCCeeeeeccccccc-ccceEEEEE-e-CchhHHhhhccCCccccccccccccc
Q 046506 79 VDAAYAGSACICP-EFRHF--IDGVEGADSFSLNAHKWFFT-TLDCCCLWV-K-DPSDLVNSLSTNPEYLKNKATESKQV 152 (310)
Q Consensus 79 vD~a~~~~~~~~~-~~~~~--~~~~~~~D~~~~~~hK~l~~-p~g~g~l~v-~-~~~~~~~~~~~~~~y~~~~~~~~~~~ 152 (310)
.|.++........ ..... ......--+++.|..|.++. ..-+|++++ . ++..+.+.............
T Consensus 210 ~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 283 (396)
T PRK09257 210 LDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNY------ 283 (396)
T ss_pred EeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhc------
Confidence 9999865432111 11110 01110112567999999985 466777764 3 33322211100000000000
Q ss_pred cCCCCceeccCCCcchHHHHHHHHHhC--------HHHHHHHHHHHHHHHHHHHHHHcCCC---CeEEecCCCceEEEEE
Q 046506 153 VDYKDWQITLSRRFRSLKLWFVLRNYG--------VANLRHFLRSHVNMAKLFERLVGSDK---RFEVVFPRHFAVVCFR 221 (310)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~~~a~~l~~~L~~~~---~~~v~~~~~~~~v~~~ 221 (310)
.. ...+...++.+.+. ...+++..++..+..+.+.+.|++.. ++.+. .|..+...|
T Consensus 284 --------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~-~p~gg~~~w- 350 (396)
T PRK09257 284 --------SN---PPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFI-ARQRGMFSY- 350 (396)
T ss_pred --------CC---CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc-cccceEEEe-
Confidence 00 01111111222221 12344566777778888888887752 24443 344444333
Q ss_pred EcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 222 VSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
+.-+ .+....+.++.++++.+. + |+++++ .++++|+.+++.|+++
T Consensus 351 ~~l~-------------------------~~~~~~l~~~~~V~~~p~-----~--ri~~~~--~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 351 SGLT-------------------------PEQVDRLREEFGVYAVGS-----G--RINVAG--LNESNIDYVAEAIAAV 395 (396)
T ss_pred cCCC-------------------------HHHHHHHHHcCCEEEcCC-----C--eEEEee--CCHHHHHHHHHHHHhh
Confidence 2211 122333444434555442 2 999763 7888999999999864
No 313
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.12 E-value=4.6e-09 Score=90.53 Aligned_cols=261 Identities=14% Similarity=0.138 Sum_probs=172.1
Q ss_pred ecCCCCCC-EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 5 IVGIDVKN-FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 5 ~~g~~~~~-v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+-|+..++ .+.|.+.+++ -.+..+++-+.|.++.+ -..+|+.+.....+|...++.+|..--+..|+.+=-|=||
T Consensus 178 lhG~~~e~sm~~iePREGE-etlRteDILd~IEkngD---eiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAH 253 (465)
T KOG3846|consen 178 LHGISPENSMIQIEPREGE-ETLRTEDILDTIEKNGD---EIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAH 253 (465)
T ss_pred hcCCChHHheEEecccccc-cchhHHHHHHHHHhcCC---eEEEEEeecceeecccccchhhhhhcccCCCcEechhhhh
Confidence 33444332 3456666543 36888999998877643 3568888999999999999999997666679999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeeccccccc-ccceEEEEEeCchhHHhhhccCCccccccccccc---cc--cCCCC
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFT-TLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESK---QV--VDYKD 157 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~-p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~---~~--~~~~~ 157 (310)
+.+-.+...+.. ++|+-+.+..|.+++ +.|.|.++|..+.. ....+...++.....+... .. +..+.
T Consensus 254 AvgNVpL~LHdW------gVDFACWCSYKYlnaGaGgIgGlFvHekh~-~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa 326 (465)
T KOG3846|consen 254 AVGNVPLQLHDW------GVDFACWCSYKYLNAGAGGIGGLFVHEKHT-KESLPRLAGWWGHDPSKRFQMDNVLELIPGA 326 (465)
T ss_pred hhcCCceEEeec------CCceEEEeeecccccCCCccceeeeehhhh-cchhhHHhhhccCCcchhhhhccccccCccc
Confidence 988776643322 699999999999986 78899999987743 2322222223222211100 00 11111
Q ss_pred ceeccCCC--cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeE-----------EecC----CCceEEEE
Q 046506 158 WQITLSRR--FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFE-----------VVFP----RHFAVVCF 220 (310)
Q Consensus 158 ~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~-----------v~~~----~~~~~v~~ 220 (310)
.++..+-+ ....++..+++......+.+.+++..-++-|+...++...|.. ++.| .+...++.
T Consensus 327 ~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl 406 (465)
T KOG3846|consen 327 LGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSL 406 (465)
T ss_pred cccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEE
Confidence 11122211 1335667778877777889999999999888888777654443 2222 13445555
Q ss_pred EEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 221 RVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
.+..+. ..+...|.++|.+. +-...++||++..+.||+-.||-.++++|.++
T Consensus 407 ~Fssp~------------------------~~vfqeL~krGv~~----DkR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~ 458 (465)
T KOG3846|consen 407 YFSSPT------------------------PKVFQELHKRGVIG----DKRRPNVIRVAPVPLYNTFSDVYIFVNALNEA 458 (465)
T ss_pred EeCCCc------------------------hHHHHHHHHcCeec----cccCCCceEeecchhhccHHHHHHHHHHHHHH
Confidence 555432 34566666677432 12346789999888999999999999999998
Q ss_pred HHHH
Q 046506 301 LEAL 304 (310)
Q Consensus 301 ~~~~ 304 (310)
+..+
T Consensus 459 ~d~~ 462 (465)
T KOG3846|consen 459 MDKL 462 (465)
T ss_pred HHHh
Confidence 8654
No 314
>PRK05839 hypothetical protein; Provisional
Probab=99.12 E-value=8e-09 Score=95.35 Aligned_cols=229 Identities=14% Similarity=0.068 Sum_probs=126.5
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
+...|+. ++.+|.++.+.+.+|+++.+ + +. +.++++...+|++|.+.+ +++|+++|++||+++++
T Consensus 126 ~~~~g~~---v~~v~~~~~~~~~~d~~~~~--~-~~------~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~ 193 (374)
T PRK05839 126 AIASRAK---VLLMPLTKENDFTPSLNEKE--L-QE------VDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILIN 193 (374)
T ss_pred HHhcCCE---EEEeecccccCCcCCcchhh--h-cc------ccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEe
Confidence 4566776 99999986545666655432 2 11 346777788999999866 66778889999999999
Q ss_pred ecccccccccChhhhhhhc-----CC-C-CCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCcccccccccccc
Q 046506 80 DAAYAGSACICPEFRHFID-----GV-E-GADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQ 151 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~-----~~-~-~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~ 151 (310)
|.+++-.....+ ...... +. . .-=++..|..|.++.| .-+|+++. ++..+....... .+.....
T Consensus 194 DE~Y~~~~~~~~-~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~-~~~~~~~~~~~~-~~~~~~~----- 265 (374)
T PRK05839 194 DECYSEIYENTP-PPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAG-DASILKKYKAYR-TYLGCAS----- 265 (374)
T ss_pred ccchhhcccCCC-CCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEec-CHHHHHHHHHHH-hhcCCCC-----
Confidence 999864321111 111000 00 0 0115668999986554 55666654 444433221110 1111000
Q ss_pred ccCCCCceeccCCCcchHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhh
Q 046506 152 VVDYKDWQITLSRRFRSLKLWFVLRNY-GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDK 230 (310)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~ 230 (310)
......++...+ ..+.++++.++..++.+.+.+.| ++. .++.+..+.+.+.+.
T Consensus 266 ---------------~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l----~~~--~p~gg~fi~~~~~~~----- 319 (374)
T PRK05839 266 ---------------PLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREIL----GIT--IPPATFYVWLPVDND----- 319 (374)
T ss_pred ---------------ChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhc----CCC--CCCeeEEEEEeCCCh-----
Confidence 111111111112 23445566666666666666654 222 233444555544321
Q ss_pred hhhhhccccchhHHHHHHHHHHHHHHHHh-cCcEEEEEe-EEC----CEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 231 LKTKYENSLLSEEERINEFNRELLESINA-SGKAYMTHA-VLG----GIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~-~~~----~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
.++.+.+.+ .|. .+.+. ... +.+++|+|+. .+++++...++.|++++
T Consensus 320 --------------------~~~~~~l~~~~gi-~v~pg~~f~~~~~~~~~iRis~~---~~~~~~~~~l~~l~~~l 372 (374)
T PRK05839 320 --------------------EEFTKKLYQNEGI-KVLPGSFLGRNGIGKGYVRIALV---YDTPKLEKALEIIKTYL 372 (374)
T ss_pred --------------------HHHHHHHHHHCCE-EEeCchhhCCCCCCCCeEEEEec---CCHHHHHHHHHHHHHHh
Confidence 356666655 554 44443 222 2479999965 25889999998888765
No 315
>PRK12403 putative aminotransferase; Provisional
Probab=99.12 E-value=2.7e-08 Score=94.15 Aligned_cols=238 Identities=11% Similarity=-0.021 Sum_probs=131.1
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCC
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGA 103 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 103 (310)
.++|++.|.+... .....|++.-...+.|.+.| +++|.++|++||+++++|.+|++.......+.....++. .
T Consensus 208 ~~~le~~~~~~~~--~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~-P 284 (460)
T PRK12403 208 ALQLEEKILELGA--ENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFE-P 284 (460)
T ss_pred HHHHHHHHHHhCC--CceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCC-C
Confidence 3567776653211 12456777777777898888 999999999999999999999766444432221112343 6
Q ss_pred Ceeeeeccccccccc-ceEEEEEeCchhHHhhhccC-CccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 104 DSFSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLSTN-PEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 104 D~~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~~-~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
|+++ ..|.+++.+ ..|.++++++ .. +.+... ..|+... + -++-+..+.+..++++.+..+
T Consensus 285 Div~--~gK~lggG~~Piga~v~~~~-i~-~~~~~~~~~~~~~~-------------T-~~gnPl~~Aaala~L~~i~~~ 346 (460)
T PRK12403 285 DTLS--IAKGLTSGYVPMGGLVLSKR-IA-EALVEQGGVFAHGL-------------T-YSGHPVAAAVAIANLKALRDE 346 (460)
T ss_pred CeEE--EcccccccccceEEEEECHH-HH-HHHhcCCCccccCC-------------C-CCCCHHHHHHHHHHHHHHHhc
Confidence 8886 579888653 5666666533 32 333211 1111100 0 011122334445556555433
Q ss_pred HHHHHHHHHH-HHHHHHHHHHcCC-CCeEEecCC--CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHV-NMAKLFERLVGSD-KRFEVVFPR--HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESI 257 (310)
Q Consensus 182 ~~~~~~~~~~-~~a~~l~~~L~~~-~~~~v~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (310)
+ ..++.. ++.+++++.|+++ ....++... ...++.+.+...... ..+.... ......+...+
T Consensus 347 ~---l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~---------~~~~~~~--~~~~~~~~~~~ 412 (460)
T PRK12403 347 G---VVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKAT---------RKRFANE--NDLAWRCRTIG 412 (460)
T ss_pred c---HHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccc---------cccccch--hHHHHHHHHHH
Confidence 3 455554 6667777766542 122222221 233444545321000 0000000 12223455667
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
.++|.+.. +. ...+|+++. .-.|++|++.+++++++.+.++++
T Consensus 413 ~~~Gll~~-~~----~~~~~l~Pp-l~it~~eid~~~~~l~~al~~~~~ 455 (460)
T PRK12403 413 FEEGVIIR-ST----LGRMIMAPA-LVAGRAEIDELVDKTRIAVDRTAR 455 (460)
T ss_pred HhCCEEEE-ec----CCEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 77885443 21 235899855 458999999999999999988753
No 316
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.12 E-value=1.9e-08 Score=95.24 Aligned_cols=241 Identities=11% Similarity=0.045 Sum_probs=133.0
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
+.+.+++.+.+.......+..|++.-.....|.+.| ++++.++|++||+++++|..+.++......+.-...++ .
T Consensus 214 ~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv-~ 292 (464)
T PRK06938 214 NLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGI-I 292 (464)
T ss_pred HHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCC-C
Confidence 367788888643211112445555555555566654 88999999999999999999876654443222111233 3
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
.|++++ .|.+++.+..|.++.++. + +.+. +.+..+ ++ ++.+....+..++++.+..+
T Consensus 293 PDiv~~--gKglggG~PlsAv~~~~~--~-~~~~--~~~~~~--------------T~-~gnpla~Aaa~a~L~~l~~~- 349 (464)
T PRK06938 293 PDVVVL--SKAIGGSLPLAVVVYREW--L-DTWQ--PGAHAG--------------TF-RGNQMAMAAGSATLRYIKEH- 349 (464)
T ss_pred CCEEEe--eccccCCCceEEEeehhH--h-hccC--CCCCCC--------------CC-CcCHHHHHHHHHHHHHHHHh-
Confidence 798888 588876566787876643 2 2221 111111 11 11122333444455544333
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC-CCeEEecC-CC-ceEEEEEEcCCcchhhhhhhhcc-ccchhHHHHHHHHHHHHHHHH
Q 046506 183 LRHFLRSHVNMAKLFERLVGSD-KRFEVVFP-RH-FAVVCFRVSPSAVMDKLKTKYEN-SLLSEEERINEFNRELLESIN 258 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~-~~-~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~ 258 (310)
+..++..++.++|.+.|+++ ....++.. .. ...+.+.+...... ++.. ..+.+ ......+...+.
T Consensus 350 --~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~-----~~~~~~~~~~----~~~~~~~~~~~~ 418 (464)
T PRK06938 350 --RLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGE-----PDALGHPPAN----GELASLIQRECL 418 (464)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCccc-----ccccccCCcc----HHHHHHHHHHHH
Confidence 45566667777777777654 12222222 11 23444544321000 0000 00000 123356677777
Q ss_pred hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 259 ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 259 ~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
++|.+. .+.. ....+|||.++ .-.|++||+.+++++.+.+..+.
T Consensus 419 ~~Gll~-~~~g-~~~~~l~~~Pp-l~it~~eid~~~~~l~~~l~~~~ 462 (464)
T PRK06938 419 RRGLIL-ELGG-RHGSVVRFLPP-LIITAEQIDEVAEIFAEAVAAAV 462 (464)
T ss_pred HCCeEE-eecC-CCCCEEEEECC-CccCHHHHHHHHHHHHHHHHHHh
Confidence 888543 3221 12468999855 67899999999999999887653
No 317
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.12 E-value=1.4e-08 Score=95.89 Aligned_cols=228 Identities=11% Similarity=0.079 Sum_probs=128.9
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEec-cCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATI-GTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~-~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
++++++.|... +.....|++.- .....|.+.| ++++.++|++||+++++|..+.+.......+.....++ .
T Consensus 208 ~~~l~~~l~~~---~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv-~ 283 (453)
T PRK06943 208 LADVRRLFAER---AGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGV-W 283 (453)
T ss_pred HHHHHHHHHhC---CCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCC-C
Confidence 46777777532 12244555554 2455566544 88999999999999999999876644443222112234 3
Q ss_pred CCeeeeeccccccccc-ceEEEEEeCchhHHhhhccCC---ccccccccccccccCCCCceeccCCCcchHHHHHHHHHh
Q 046506 103 ADSFSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLSTNP---EYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNY 178 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~~~---~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 178 (310)
.|++++ .|.+++.+ ..|.+..+++ .. +.+.... .+. .. .++ ++-+....+..++++.+
T Consensus 284 PDivt~--gKgl~gG~~Pi~av~~~~e-i~-~~~~~~~~~~~~~-~~------------~T~-~gnpl~~aaa~a~L~~i 345 (453)
T PRK06943 284 PDFLCL--SKGISGGYLPLSLVLSRDA-IF-AAFYDDDVTRGFL-HS------------HSY-TGNPLACRAALATLDLF 345 (453)
T ss_pred CCeEee--ehhhccCcccceEEEEcHH-HH-HhhcccCccCCcc-CC------------CCC-CCCHHHHHHHHHHHHHH
Confidence 899888 68777652 5677777654 32 3322110 000 00 011 11122233344445444
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHcCC---CCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHH
Q 046506 179 GVANLRHFLRSHVNMAKLFERLVGSD---KRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLE 255 (310)
Q Consensus 179 ~~~~~~~~~~~~~~~a~~l~~~L~~~---~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 255 (310)
.+ +...++..++.++|.+.|+++ +.+.=+.. ...++.+.+..... .. ......+..
T Consensus 346 ~~---~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG-~Gl~~gvel~~~~~-------------~~----~~~~~~i~~ 404 (453)
T PRK06943 346 AE---DDVLARNARKSARLRAALAPLAAHPQVRHLRQ-RGTIFAFDVALDGD-------------AA----RTFSRRFFE 404 (453)
T ss_pred Hh---cCHHHHHHHHHHHHHHHHHHHhcCCCEEeEec-cccEEEEEEccCCC-------------cc----hHHHHHHHH
Confidence 33 345566667777777777654 33321111 22334454432100 00 223456777
Q ss_pred HHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 256 SINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 256 ~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.+.++|.+. .+. + ..+||++. .-.|++|||.++++|.+.+..+
T Consensus 405 ~~~~~Gll~-~~~---g-~~l~~~Pp-l~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 405 AALERELLL-RPI---G-TTVYLMPP-YVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred HHHHCCcEE-Eec---C-CEEEEeCC-CcCCHHHHHHHHHHHHHHHHHH
Confidence 788888644 322 2 36999955 6799999999999999988765
No 318
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.12 E-value=4.9e-09 Score=98.28 Aligned_cols=223 Identities=12% Similarity=0.007 Sum_probs=125.4
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEecc-CCcccc----cCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIG-TTAITA----VDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~-~~~~G~----~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
|++++++.+.... .....|++... ....|. ..++++|.++|++||+++++|.+|.+.......+.....++
T Consensus 193 ~~~~l~~~l~~~~---~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v- 268 (427)
T TIGR00508 193 AITPLAKLMELHS---DEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGV- 268 (427)
T ss_pred HHHHHHHHHHhcC---CcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCC-
Confidence 5677888886431 12345555543 333343 35699999999999999999999954333222111111233
Q ss_pred CCCeeeeeccccccccc-ceEEEEEeCchhHHhhhccC--CccccccccccccccCCCCceeccCCCcchHHHHHHHHHh
Q 046506 102 GADSFSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLSTN--PEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNY 178 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~~--~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 178 (310)
..|+++ ..|.+++.. .++.++.+++ . .+.+... ..+.... ++. +.+.......++++.+
T Consensus 269 ~pDi~~--~gK~l~gG~~p~~a~~~~~~-~-~~~~~~~~~~~~~~~~-------------T~~-g~p~~~aaa~a~l~~l 330 (427)
T TIGR00508 269 VPDILC--VGKALTGGYMTLSATVTTDK-V-AQTISSGEAGCFMHGP-------------TFM-GNPLACAVAEASLAIL 330 (427)
T ss_pred CCCEEE--echhhhcCcccceEEEEcHH-H-HHHHhcCCCCccccCC-------------CCC-cCHHHHHHHHHHHHHH
Confidence 378776 489886542 3455554433 3 2333211 1111100 011 1223344445555555
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC--CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHH
Q 046506 179 GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR--HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLES 256 (310)
Q Consensus 179 ~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 256 (310)
..+ +..++..++.++|++.|+++.....+... ...++.+.+.... ....+.+.
T Consensus 331 ~~~---~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~~----------------------~~~~~~~~ 385 (427)
T TIGR00508 331 LEG---EWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKPV----------------------NVEELQKK 385 (427)
T ss_pred HhC---CHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCcc----------------------CHHHHHHH
Confidence 332 34677888888888888765322212111 2445566554321 01357778
Q ss_pred HHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 257 INASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 257 l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
+.++|. ++.+. ...+|++++ ..+|++|||++++++++.+.
T Consensus 386 l~~~Gv-~~~~~----~~~l~~~pp-l~~t~~~id~~~~~l~~~l~ 425 (427)
T TIGR00508 386 FVEQGV-WIRPF----GKLIYVMPP-YIITTEQLQKLTAALIEALH 425 (427)
T ss_pred HHHCCe-EEEec----CCEEEEECC-CCCCHHHHHHHHHHHHHHHh
Confidence 888885 44332 237999955 56899999999999998764
No 319
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.11 E-value=8.4e-09 Score=94.82 Aligned_cols=203 Identities=12% Similarity=0.046 Sum_probs=115.3
Q ss_pred cEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEeecccccccccChhhhhhhc---C-CCCCCeeeeecccccccc
Q 046506 45 PLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID---G-VEGADSFSLNAHKWFFTT 117 (310)
Q Consensus 45 ~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~---~-~~~~D~~~~~~hK~l~~p 117 (310)
+.+++++..+|++|.+.+ +++|.++|++||+++++|.+++......+....... + ...-.+++.|+.|.++.|
T Consensus 149 ~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 228 (364)
T PRK07865 149 PALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLA 228 (364)
T ss_pred ceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCC
Confidence 457777788999998866 678889999999999999999754322111000000 0 001236789999998655
Q ss_pred c-ceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhC-HHHHHHHHHHHHHHHH
Q 046506 118 L-DCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYG-VANLRHFLRSHVNMAK 195 (310)
Q Consensus 118 ~-g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~a~ 195 (310)
. -+|++ +.+++.+....... .+.... ...+...++...+. .+.+++..+...+..+
T Consensus 229 GlRiG~i-~~~~~~~~~~~~~~-~~~~~~--------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 286 (364)
T PRK07865 229 GYRAGFV-AGDPALVAELLEVR-KHAGMM--------------------VPAPVQAAMVAALGDDAHVREQRERYARRRA 286 (364)
T ss_pred ceeeEEE-ecCHHHHHHHHHHH-HhcCCC--------------------cCHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 2 35555 45554443321110 000000 01111122222332 2345666777778888
Q ss_pred HHHHHHcCCCCeEEecCCCceEE-EEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEEC--C
Q 046506 196 LFERLVGSDKRFEVVFPRHFAVV-CFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLG--G 272 (310)
Q Consensus 196 ~l~~~L~~~~~~~v~~~~~~~~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--~ 272 (310)
.+.+.|.+. ++.+. ++..+.. .+.+ +.+ ..++.+.+.+.|.....+.... +
T Consensus 287 ~l~~~L~~~-g~~~~-~~~~~~~~~~~~-~~~-----------------------~~~~~~~l~~~gv~v~pg~~f~~~~ 340 (364)
T PRK07865 287 VLRPALEAA-GFRVD-HSEAGLYLWATR-GED-----------------------CWDTVAWLAERGILVAPGDFYGPAG 340 (364)
T ss_pred HHHHHHHHc-CCccc-CCCccEEEEEeC-CCC-----------------------HHHHHHHHHHCCEEEeCccccCcCC
Confidence 889999875 77665 3444433 2222 211 0245566667776544433222 3
Q ss_pred EeEEEEEccCCCCCHHHHHHHHHHHH
Q 046506 273 IYAIRFAAGATLTEERHVMVAWTVVQ 298 (310)
Q Consensus 273 ~~~iRis~~~~~~t~edi~~li~~l~ 298 (310)
.+++|+++.. ++++++..++.|+
T Consensus 341 ~~~iRi~~~~---~~~~~~~~~~~l~ 363 (364)
T PRK07865 341 AQHVRVALTA---TDERIAAAVERLA 363 (364)
T ss_pred CCEEEEEecC---CHHHHHHHHHHhh
Confidence 5799999663 5889999998774
No 320
>PRK08637 hypothetical protein; Provisional
Probab=99.11 E-value=9.1e-09 Score=95.45 Aligned_cols=246 Identities=11% Similarity=0.075 Sum_probs=130.5
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHH-----hCcE
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQ-----FGIW 76 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~-----~g~~ 76 (310)
..|.. ++.+|.+.+ ++.+|+++++++++..... ...++++..++|++|...+ +++|+++|++ |+++
T Consensus 113 ~~g~~---vv~v~~~~~-~~~~d~~~l~~~~~~~~~~--~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~ 186 (388)
T PRK08637 113 RRGAE---IVTYPIFDE-DGGFDTDALKEALQAAYNK--GKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVV 186 (388)
T ss_pred hcCCE---EEEecccCC-CCcCCHHHHHHHHHhhccC--CCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEE
Confidence 45666 999998422 2368999999998732111 1345666678999998766 6667777765 8999
Q ss_pred EEeecccccccccChhhhh----hhcCCCCCCeee-eecccccccc-cceEEEEEeC-----chhHHhhhccC-Cccccc
Q 046506 77 VHVDAAYAGSACICPEFRH----FIDGVEGADSFS-LNAHKWFFTT-LDCCCLWVKD-----PSDLVNSLSTN-PEYLKN 144 (310)
Q Consensus 77 l~vD~a~~~~~~~~~~~~~----~~~~~~~~D~~~-~~~hK~l~~p-~g~g~l~v~~-----~~~~~~~~~~~-~~y~~~ 144 (310)
+++|.++....+....... .......+-++. .+..|.++.| .-+|++++.. +... +.+... ..+...
T Consensus 187 iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~-~~~~~~~~~~~~~ 265 (388)
T PRK08637 187 AVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVK-EALEKKVKGLIRS 265 (388)
T ss_pred EEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHH-HHHHHHHHHHhhc
Confidence 9999998654432211111 011111121222 3889976655 4477777643 3332 222100 000000
Q ss_pred cccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHH----HHHHHHHHHHHHHHHHHcCC---CCeEEecCCCceE
Q 046506 145 KATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLR----HFLRSHVNMAKLFERLVGSD---KRFEVVFPRHFAV 217 (310)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~a~~l~~~L~~~---~~~~v~~~~~~~~ 217 (310)
.. . ....+...++...+....+. +...+..+..+.+.+.|.+. +++.+. ++..+.
T Consensus 266 ~~--------------~---~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~-~~~~g~ 327 (388)
T PRK08637 266 NI--------------S---NGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAY-PFNSGY 327 (388)
T ss_pred cc--------------C---CCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccc-cccceE
Confidence 00 0 00112222333333332332 22333444455556666543 245554 344443
Q ss_pred E-EEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh-cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHH
Q 046506 218 V-CFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA-SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWT 295 (310)
Q Consensus 218 v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~ 295 (310)
+ .+.+.+. -..++.+.+.+ .|.... + .+.+++|+++.. .++++++..++
T Consensus 328 ~~~~~l~~~-----------------------~~~~l~~~l~~~~gv~~~-~---~~~~~iRi~~~~--~~~~~i~~~~~ 378 (388)
T PRK08637 328 FMCLKLKGV-----------------------DAEELRVHLLEKYGIGTI-A---LNETDLRIAFSC--VEEEDIPELFD 378 (388)
T ss_pred EEEecCChH-----------------------HHHHHHHHHhhhcceEEE-e---ccCCceEEEeec--CCHHHHHHHHH
Confidence 3 3333210 12456666654 454332 2 245689999763 67889999999
Q ss_pred HHHHHHHHH
Q 046506 296 VVQEHLEAL 304 (310)
Q Consensus 296 ~l~~~~~~~ 304 (310)
.|.++++++
T Consensus 379 ~l~~~~~~~ 387 (388)
T PRK08637 379 SIYKAIKDL 387 (388)
T ss_pred HHHHHHHhc
Confidence 998888765
No 321
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.11 E-value=1.6e-08 Score=95.05 Aligned_cols=216 Identities=11% Similarity=0.053 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccC----ChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCC
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVD----TLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGA 103 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~----pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 103 (310)
++++++.+... +..+..+++.-.....|.+. .+++|.++|++||+++++|+++.+.......+.-...++ ..
T Consensus 205 l~~~~~~~~~~---~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv-~P 280 (431)
T TIGR03251 205 LRQARAAFAER---PHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGV-QP 280 (431)
T ss_pred HHHHHHHHHhC---CCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCC-CC
Confidence 44555566432 22356777777777778764 499999999999999999999975544332211111233 38
Q ss_pred CeeeeecccccccccceEEEEEeCch-hHHh-hhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 104 DSFSLNAHKWFFTTLDCCCLWVKDPS-DLVN-SLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 104 D~~~~~~hK~l~~p~g~g~l~v~~~~-~~~~-~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
|++++ .|.+ | .+|++ ..++- .+.. .+. .+.... .++ ++-+....+..++++.+..+
T Consensus 281 Di~~~--gK~~--~-~~g~~-~~~~i~~~~~~~~~-~~~~~~--------------~T~-~gnpl~~aaa~a~L~~l~~~ 338 (431)
T TIGR03251 281 DIVAF--GKKT--Q-VCGIM-AGRRVDEVADNVFA-VPSRLN--------------STW-GGNLVDMVRATRILEIIEEE 338 (431)
T ss_pred CEEEe--cccC--c-cceEE-ecchHHHhhhhccc-CccccC--------------CCC-CCCHHHHHHHHHHHHHHHhc
Confidence 98876 4554 3 23444 44331 1101 110 000000 011 11122334444555555333
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC-CCeE-EecCC--CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSD-KRFE-VVFPR--HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESI 257 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~-~~~~-v~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (310)
+ ..++..++.+++.+.|+++ .... ++... ...++.+.+.+. .....+...+
T Consensus 339 ~---l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~----------------------~~~~~~~~~l 393 (431)
T TIGR03251 339 R---LVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPST----------------------ADRDEVIRQL 393 (431)
T ss_pred C---HHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCH----------------------HHHHHHHHHH
Confidence 3 3445555666666666442 1122 22222 234556666431 2234677778
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHH
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQE 299 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~ 299 (310)
.++|.+ +.+. +...+|++++ ..+|++|||+++++|.+
T Consensus 394 ~~~Gvl-~~~~---g~~~lr~~P~-l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 394 YREGVL-LLGC---GERSIRFRPP-LTVTREEIDAAIDAIRR 430 (431)
T ss_pred HhCCeE-EecC---CCCeEEEECC-ccCCHHHHHHHHHHHHh
Confidence 888754 3322 3367999955 78999999999999876
No 322
>PRK07480 putative aminotransferase; Validated
Probab=99.11 E-value=1.5e-08 Score=95.75 Aligned_cols=240 Identities=10% Similarity=-0.049 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCC
Q 046506 29 DSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGAD 104 (310)
Q Consensus 29 ~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D 104 (310)
+.|++.+.... ......|++.-.....|.+.| +++|.++|++||+++++|.++.++......+.....++ ..|
T Consensus 206 ~~l~~~~~~~~--~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PD 282 (456)
T PRK07480 206 RQLEAKILELG--ADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGI-KPD 282 (456)
T ss_pred HHHHHHHHhcC--CCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCC-CCC
Confidence 56666554321 112446666656666788776 99999999999999999999966543332221111233 378
Q ss_pred eeeeeccccccccc-ceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHH
Q 046506 105 SFSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANL 183 (310)
Q Consensus 105 ~~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 183 (310)
++++ .|.+++.+ ..|.+.++++ .. +.+...+....... ++ ++-+..+.+..++|+.+..+
T Consensus 283 iv~~--gK~l~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~~~~------------T~-~gnpl~~Aaa~a~L~~l~~~-- 343 (456)
T PRK07480 283 LMTI--AKGLTSGYIPMGAVGVGDR-VA-EVLIEEGGEFNHGF------------TY-SGHPVAAAVALANLRILRDE-- 343 (456)
T ss_pred eeee--ehhhccCCccceEEEEcHH-HH-HHHhcCCCCcccCC------------CC-CcCHHHHHHHHHHHHHHHhC--
Confidence 7766 68877532 3677766544 32 33311111000000 11 11122334445555555333
Q ss_pred HHHHHHH-HHHHHHHHHHHcCCCCeEEecCC--CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhc
Q 046506 184 RHFLRSH-VNMAKLFERLVGSDKRFEVVFPR--HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINAS 260 (310)
Q Consensus 184 ~~~~~~~-~~~a~~l~~~L~~~~~~~v~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 260 (310)
...++. .++.++|.+.|+++....++... ...++.+.+..... ...+.. ........+...+.++
T Consensus 344 -~l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Glm~gie~~~~~~---------~~~~~~--~~~~~~~~~~~~~~~~ 411 (456)
T PRK07480 344 -GIVERVRDDTGPYLQKRLRELADHPLVGEVRGVGLVGAIELVKDKA---------TRERFE--AGGGVGTICRDHCFAN 411 (456)
T ss_pred -CHHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecceEEEEEecccc---------ccccCc--chhhHHHHHHHHHHHC
Confidence 344555 35666666666554222222111 12334444432100 000000 0012234566777888
Q ss_pred CcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhhcc
Q 046506 261 GKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLSAS 308 (310)
Q Consensus 261 g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~~~ 308 (310)
|.+. .+. ...+|+++. ...|++|||.++++|.+.+.++++.+
T Consensus 412 Gll~-~~~----~~~l~~~Pp-l~it~~eid~~~~~l~~al~~~~~~~ 453 (456)
T PRK07480 412 GLIM-RAV----GDRMIISPP-LVITHAEIDELVEKARKALDATAAEL 453 (456)
T ss_pred CcEE-eec----CCEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 8644 321 257999955 46799999999999999998875543
No 323
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.11 E-value=5.7e-09 Score=98.26 Aligned_cols=216 Identities=13% Similarity=0.145 Sum_probs=121.7
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC-
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE- 101 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~- 101 (310)
++++|+++|.+.. .....|++.-.....|.+.| +++|.++|++||++|++|.++.+.......+.--..++.
T Consensus 237 ~l~~l~~~l~~~~---~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~ 313 (464)
T TIGR00699 237 CLEEVEDLIKKWH---KPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDD 313 (464)
T ss_pred HHHHHHHHHHhcC---CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCC
Confidence 4567778886421 12456777777777788888 999999999999999999998655433322111112332
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
..|++++ .|.+++ .|++ +..+ .+. ...+.+...+ -.+-+..+.+..++++.+..
T Consensus 314 ~PDi~t~--gK~lg~---gG~~-~~~~-~~~---~~~~~~~~~T---------------~~gnp~~~aaa~a~L~~l~~- 367 (464)
T TIGR00699 314 PPDMVTF--SKKFQT---AGYF-FHDP-AFR---PNKPYRQFNT---------------WMGDPSRALILREIIQEIKR- 367 (464)
T ss_pred CCCEEEe--hhhhcc---CCcc-ccch-hcc---CCCCcccccC---------------CCCCHHHHHHHHHHHHHHHh-
Confidence 3788665 687741 2333 2221 110 0011111111 01111223333445555533
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC-CCeE-EecC----CCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSD-KRFE-VVFP----RHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLE 255 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~-~~~~-v~~~----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 255 (310)
++..++..++.++|++.|+++ ..+. ++.. ....++.+.+.. ......+.+
T Consensus 368 --~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~----------------------~~~~~~i~~ 423 (464)
T TIGR00699 368 --KDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPD----------------------EAKRDKLLK 423 (464)
T ss_pred --cCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCC----------------------HHHHHHHHH
Confidence 345555656666777776553 1122 1111 234455555432 122356777
Q ss_pred HHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 256 SINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 256 ~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
.+.++|.+ +.+. +..+|||+++ ...|++||+.++++|.+.
T Consensus 424 ~~~~~Gvl-~~~~---g~~~ir~~Pp-l~it~~eid~~~~~l~~~ 463 (464)
T TIGR00699 424 KARNNGVN-IGGC---GVKAIRLRPM-LVFQKHHADIFLEIISKI 463 (464)
T ss_pred HHHHCCcE-EecC---CCCeEEEeCC-CCCCHHHHHHHHHHHHHh
Confidence 88888854 3332 4478999955 679999999999999875
No 324
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.11 E-value=1.3e-08 Score=96.38 Aligned_cols=234 Identities=11% Similarity=0.032 Sum_probs=128.2
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++|++.|.... .....|++.-...+.|.+.| +++|.++|++||+++++|.++.+. ...........++ .
T Consensus 232 d~~~l~~~l~~~~---~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv-~ 306 (474)
T PLN02482 232 DLEAVKKLFEANK---GEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGI-T 306 (474)
T ss_pred ChHHHHHHHHhCC---CceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCC-C
Confidence 6899999986531 23456777777777888877 568999999999999999999644 3322111111233 3
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhcc-CCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLST-NPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
.|.+++ .|.+++.+..|.+..+ ++.. +.+.. .+.+...+ +. +-+....+..++++.+..
T Consensus 307 PDi~t~--gK~lggG~Pigav~g~-~ei~-~~~~~~~~~~~~~T--------------~~-gnpl~~aAala~L~~l~~- 366 (474)
T PLN02482 307 PDLTTL--GKVIGGGLPVGAYGGR-REIM-EMVAPAGPMYQAGT--------------LS-GNPLAMTAGIHTLKRLQQ- 366 (474)
T ss_pred CCEEEe--cchhhCCCceEEEEEc-HHHH-HhhccCCCcccccC--------------cc-hhHHHHHHHHHHHHHHhc-
Confidence 787655 8998875557777554 4333 33321 11111111 11 111223334455555532
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC-C--CeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSD-K--RFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESIN 258 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~-~--~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 258 (310)
++.+++..++.++|+++|.++ . ++.++.....+++.+.+....+... ++.. ..+ ......+...|.
T Consensus 367 --~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~~-~~~~----~~d----~~~~~~~~~~l~ 435 (474)
T PLN02482 367 --PGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMFGFFFTEGPVYNF-ADAK----KSD----TAKFARFHRGML 435 (474)
T ss_pred --cCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEEEEEEecCCccCh-hhhc----cCC----HHHHHHHHHHHH
Confidence 346777778888888888754 1 2333311222244444432110000 0000 000 122345677788
Q ss_pred hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 259 ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 259 ~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
++|. ++.+..+.. ++ .+...|++|||++++++.+.+..
T Consensus 436 ~~Gv-~~~~~~~~~----~~--psl~ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 436 EEGV-YLAPSQFEA----GF--TSLAHTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred HCCe-EEeccCCCC----Cc--CCCCCCHHHHHHHHHHHHHHHHh
Confidence 8875 444321111 11 33567899999999999988754
No 325
>PRK07482 hypothetical protein; Provisional
Probab=99.10 E-value=1.4e-08 Score=96.14 Aligned_cols=245 Identities=10% Similarity=0.036 Sum_probs=131.7
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
++++|++.|.... ......|++.-.....|.+.| +++|.++|++||+++++|..+.++......+.-...++ .
T Consensus 205 ~~~~l~~~~~~~~--~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv-~ 281 (461)
T PRK07482 205 CADELEELILAEG--PDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGI-E 281 (461)
T ss_pred HHHHHHHHHHhcC--CCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCC-C
Confidence 4677888875321 112445555555555566644 88999999999999999999877654443322112334 3
Q ss_pred CCeeeeeccccccccc-ceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
.|++++ .|.+++.+ ..|.++++++ .. +.+....+...... ...++ ++-+..+.+..++++.+.++
T Consensus 282 PDiv~~--gKgl~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~~~~---------h~~T~-~gnpl~~Aaa~a~L~~~~~~ 347 (461)
T PRK07482 282 PDLITV--AKGLTSAYAPLSGSIVGEK-VW-DVLEQGSDEHGAIG---------HGWTY-SGHPICAAAALANLDILERE 347 (461)
T ss_pred CCEEEE--ccccccCccccceeeecHH-HH-HHHhcccccCCccc---------cCCCC-CcCHHHHHHHHHHHHHHHhC
Confidence 899887 68887643 4666766644 22 33221110000000 00011 11122334444555555333
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC-CCeEEecC-C-CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSD-KRFEVVFP-R-HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESIN 258 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~-~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 258 (310)
...++..++.++|.+.|+++ ....++.. . ...++.+.+..... ...+.+.. ......+...+.
T Consensus 348 ---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~---------~~~~~~~~--~~~~~~i~~~~~ 413 (461)
T PRK07482 348 ---NLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRD---------DRTPFDPA--LKIGPQVSAAAL 413 (461)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCC---------cCCCCChh--hHHHHHHHHHHH
Confidence 35555666777777777532 11222111 1 22344454432100 00000000 123456778888
Q ss_pred hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 259 ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 259 ~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
++|.+... . .+..++|+.++ ..+|++||+.+++++.+.+..+.+
T Consensus 414 ~~Gvl~~~-~--~~~~~i~~~Pp-l~it~~ei~~~~~~l~~~l~~~~~ 457 (461)
T PRK07482 414 ERGVIARA-M--PHGDILGFAPP-LVLTRAEADEIVAIAKDAVDEVLG 457 (461)
T ss_pred HCCcEEec-C--CCCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 88854322 1 12357999855 679999999999999998877643
No 326
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.10 E-value=5.8e-09 Score=97.67 Aligned_cols=224 Identities=9% Similarity=-0.024 Sum_probs=123.9
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEecc-CCccccc----CChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIG-TTAITAV----DTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~-~~~~G~~----~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
|++++++.|... +.....|++... ....|.+ ..+++|.++|++||+++++|.+|.+.......+.....++
T Consensus 190 d~~~l~~~l~~~---~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv- 265 (428)
T PRK07986 190 DIAPFARLMAAH---RHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGI- 265 (428)
T ss_pred HHHHHHHHHHhC---CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCC-
Confidence 567888888632 112335555443 3334543 2389999999999999999999955433222111001223
Q ss_pred CCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCC-ccccccccccccccCCCCceeccCCCcchHHHHHHHHHhC
Q 046506 102 GADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNP-EYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYG 179 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~-~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 179 (310)
..|+++ ..|.+++. ..+|.+..+++ . .+.+.... ...... .++. +-+..+.+..++++.+.
T Consensus 266 ~PDi~t--~gK~l~gG~~p~~av~~~~~-i-~~~~~~~~~~~~~~~------------~T~~-g~p~~~aaa~a~L~~i~ 328 (428)
T PRK07986 266 APDILC--LGKALTGGTMTLSATLTTRE-V-AETISNGEAGCFMHG------------PTFM-GNPLACAVANASLSLLE 328 (428)
T ss_pred CCCEEE--echhhhCCcccCcchhchHH-H-HHHhhcCCCCccccC------------CCCC-cCHHHHHHHHHHHHHHH
Confidence 268775 57887644 23455554433 2 23332110 000000 0111 22233444555565553
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC--CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHH
Q 046506 180 VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR--HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESI 257 (310)
Q Consensus 180 ~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (310)
.+ +..++..++.++|++.|+++.....+... ...++.+.+..+. ....+...+
T Consensus 329 ~~---~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~~~----------------------~~~~~~~~l 383 (428)
T PRK07986 329 SG---DWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVETTRPV----------------------NMAALQRFF 383 (428)
T ss_pred hC---CHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEeCCcc----------------------cHHHHHHHH
Confidence 33 45777778888888888765222222211 1334445443310 023567777
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
.++|.+ +.+. + .++|++++ ...|++||+.++++|.+.+.
T Consensus 384 ~~~Gl~-~~~~---g-~~i~~~Pp-l~it~~ei~~~~~~l~~~l~ 422 (428)
T PRK07986 384 VEQGVW-IRPF---G-KLIYLMPP-YIILPEQLQRLTAAVNRAVQ 422 (428)
T ss_pred HHCCcE-EEec---C-CEEEEeCC-CCCCHHHHHHHHHHHHHHHh
Confidence 788854 4332 2 48999955 67999999999999998774
No 327
>PRK05965 hypothetical protein; Provisional
Probab=99.10 E-value=2.4e-08 Score=94.40 Aligned_cols=241 Identities=13% Similarity=0.088 Sum_probs=133.5
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCC
Q 046506 29 DSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGAD 104 (310)
Q Consensus 29 ~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D 104 (310)
+++++.|.... ......|++.-.....|.+.| +++|.++|++||+++++|..+.++......+.....++ ..|
T Consensus 202 ~~l~~~i~~~~--~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~PD 278 (459)
T PRK05965 202 AALRAKVAELG--ADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGV-VPD 278 (459)
T ss_pred HHHHHHHHhcC--CCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCC-CCC
Confidence 57777776421 112445666555555676654 88999999999999999999877654443322112233 379
Q ss_pred eeeeeccccccccc-ceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHH
Q 046506 105 SFSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANL 183 (310)
Q Consensus 105 ~~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 183 (310)
++++ .|.+++.+ ..|.+.++++ .. +.+...+....... ...++ ++.+..+.+..++++.+.+
T Consensus 279 iv~~--gKgl~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~~~~---------h~~T~-~gnpl~~Aaa~a~L~~l~~--- 341 (459)
T PRK05965 279 LMTV--AKGLTSGYVPMGAVLMSDH-VY-QGIADGAGAAAPVG---------HGYTY-SAHPVSAAVGLEVLRLYHE--- 341 (459)
T ss_pred eEEe--chhhccCCcceeEEEEcHH-HH-HHHhcccccccccc---------ccCCC-CCCHHHHHHHHHHHHHHHh---
Confidence 8888 58877653 5777777655 32 33221110000000 00011 1222233344445554433
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCeEEecCC--CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcC
Q 046506 184 RHFLRSHVNMAKLFERLVGSDKRFEVVFPR--HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASG 261 (310)
Q Consensus 184 ~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 261 (310)
+...++..++.++|.+.|+++....++... ...++.+.+..... ...+.+. . ......+...+.++|
T Consensus 342 ~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~---------~~~~~~~-~-~~~~~~i~~~~~~~G 410 (459)
T PRK05965 342 GGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKA---------TKTPFDA-A-LDPADRIFDRAYANG 410 (459)
T ss_pred ccHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEecccc---------ccCCCCc-h-hHHHHHHHHHHHhCC
Confidence 345666777888888888765322222221 12334444432100 0000000 0 123456777788888
Q ss_pred cEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 262 KAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 262 ~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
.+. .+ .+..+||+++. .-.|++||+.+++++.+.+.++.
T Consensus 411 ll~-~~---~g~~~i~~~Pp-L~it~~ei~~~~~~l~~~l~~~~ 449 (459)
T PRK05965 411 LVF-RA---FGDGVLGFAPA-LCCTEGEFDLIFERTRKTLDDVL 449 (459)
T ss_pred eEE-Ee---cCCcEEEEECC-CcCCHHHHHHHHHHHHHHHHHHh
Confidence 543 32 13467999955 67899999999999999887763
No 328
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.10 E-value=5.4e-09 Score=97.42 Aligned_cols=230 Identities=14% Similarity=0.057 Sum_probs=127.0
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEeecccccccc
Q 046506 12 NFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVDAAYAGSAC 88 (310)
Q Consensus 12 ~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD~a~~~~~~ 88 (310)
.++.+|+++.+.+..|+++ . + .+.+++++.++|++|.+.+ +++|+++|++||+++++|.++.-...
T Consensus 152 ~~~~v~~~~~~~~~~~~~~---~--~------~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~ 220 (402)
T TIGR03542 152 KITYLPCTKENNFIPDLPE---E--P------KIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFIS 220 (402)
T ss_pred eEEEeecchhhCCCCCccc---c--C------CceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhcc
Confidence 3788888754334444321 1 1 1346777789999999988 78899999999999999999865432
Q ss_pred cChhhhhhhcCCCC---CCeeeeecccccccc-cceEEEEEeCchhH-------HhhhccCCccccccccccccccCCCC
Q 046506 89 ICPEFRHFIDGVEG---ADSFSLNAHKWFFTT-LDCCCLWVKDPSDL-------VNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 89 ~~~~~~~~~~~~~~---~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~-------~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
....... ...+.. .-++..|..|.++.| .-+|+++..++ .+ ...+... ....
T Consensus 221 ~~~~~~~-~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~-l~~~~~~~~~~~~~~~---~~~~------------ 283 (402)
T TIGR03542 221 DPSLPHS-IFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKE-LTYADGHSVIQDWERR---QCTK------------ 283 (402)
T ss_pred CCCCCcc-hhhCCCCcccEEEEecCccccCCCCcceEEEEecHH-HhhcchhhHHHHHHHH---hhhc------------
Confidence 1110011 111111 124467899998644 45777766433 22 0110000 0000
Q ss_pred ceeccCCCcchHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhh
Q 046506 158 WQITLSRRFRSLKLWFVLRNYG---VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~ 234 (310)
..+ ...+...++...+. .....+..+...+..+.+.+.|++. ++++..+..++.+.+.+++.-
T Consensus 284 --~~~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~f~~v~l~~~~-------- 349 (402)
T TIGR03542 284 --FNG---ASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA-GFKVYGGEHAPYLWVKTPEGI-------- 349 (402)
T ss_pred --ccC---CCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-CceecCCCceeEEEEECCCCC--------
Confidence 000 01111112222221 1234445566677778888888875 677664445666666665310
Q ss_pred hccccchhHHHHHHHHHHHHHHHHh-cCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESINA-SGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
+ ..++.+.+.+ .|.....+.... +.+++|+++. .++++++..++.|++.
T Consensus 350 -------~-------~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~---~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 350 -------S-------SWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAF---GKRENIVEACERIKEA 401 (402)
T ss_pred -------C-------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec---CCHHHHHHHHHHHHhh
Confidence 0 1346666664 454333333222 3579999943 3678888888887754
No 329
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.10 E-value=9e-09 Score=94.41 Aligned_cols=203 Identities=10% Similarity=0.024 Sum_probs=114.7
Q ss_pred cEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCC----CCCCeeeeecccccccc
Q 046506 45 PLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV----EGADSFSLNAHKWFFTT 117 (310)
Q Consensus 45 ~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~----~~~D~~~~~~hK~l~~p 117 (310)
+.+++++..+|++|.+.+ +++|+++|++||+++++|.+++......+......... ..--++..|..|.++.|
T Consensus 143 ~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~ 222 (357)
T TIGR03539 143 PDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLA 222 (357)
T ss_pred ccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCC
Confidence 457778889999999876 66799999999999999999864332111000000000 00126668999998665
Q ss_pred cc-eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhC-HHHHHHHHHHHHHHHH
Q 046506 118 LD-CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYG-VANLRHFLRSHVNMAK 195 (310)
Q Consensus 118 ~g-~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~a~ 195 (310)
.- +|+++ .+++.+.+..... .+.. .. ...+...++...+. ...++...++..+..+
T Consensus 223 G~R~G~~i-~~~~~~~~~~~~~-~~~~-~~-------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 280 (357)
T TIGR03539 223 GYRAGFVA-GDPALVAELLTVR-KHAG-LM-------------------VPAPVQAAMVAALGDDGHVAEQKARYAARRA 280 (357)
T ss_pred ceeEEEEe-cCHHHHHHHHHHH-hhcc-cC-------------------CCHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 32 45554 5554443321111 0000 00 01111222222332 2345566667777888
Q ss_pred HHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE--CCE
Q 046506 196 LFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVL--GGI 273 (310)
Q Consensus 196 ~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~~~ 273 (310)
.+.+.|.+. ++.+. ++..+++.+...+.+ ..++.+.|.+.|.....+..+ .+.
T Consensus 281 ~~~~~L~~~-g~~~~-~p~~~~~~~~~~~~~-----------------------~~~~~~~l~~~gV~v~pg~~f~~~~~ 335 (357)
T TIGR03539 281 QLKPALEKA-GFRID-HSEAGLYLWATRGED-----------------------AWDTVDRLAELGILVAPGDFYGPAGS 335 (357)
T ss_pred HHHHHHHHc-CCCCc-CCCccEEEEEECCCC-----------------------HHHHHHHHHhCCEEECCccccCCCCC
Confidence 888888875 67654 455565544433311 134666676777543332222 235
Q ss_pred eEEEEEccCCCCCHHHHHHHHHHH
Q 046506 274 YAIRFAAGATLTEERHVMVAWTVV 297 (310)
Q Consensus 274 ~~iRis~~~~~~t~edi~~li~~l 297 (310)
+++|+|+.+ ++++++..++.|
T Consensus 336 ~~iRis~~~---~~~~i~~~~~~l 356 (357)
T TIGR03539 336 QHVRVALTA---TDERIAAAVARL 356 (357)
T ss_pred CeEEEEecC---CHHHHHHHHHhh
Confidence 799999663 578899888765
No 330
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.09 E-value=1.4e-08 Score=92.50 Aligned_cols=222 Identities=12% Similarity=0.098 Sum_probs=131.8
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|+. ++.++.++ ++.+|++++++.+. . ..++++++++|++|.+.+.++|.++|+ +|+++++|.+
T Consensus 111 ~~~~g~~---~~~v~~~~--~~~~d~~~l~~~~~-~------~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~ 177 (337)
T PRK03967 111 AKLNGIP---VIDVPLKE--DFTIDGERIAEKAK-N------ASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEA 177 (337)
T ss_pred HHHcCCe---EEEeecCC--CCCcCHHHHHHhcc-C------CCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECc
Confidence 4566776 99999875 35899999988652 2 236667889999999999999999995 7999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceec
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
+.... ............. -++..|..|.++.| .-+|+++. ++..+.........+ .
T Consensus 178 y~~~~--~~~~~~~~~~~~~-vi~l~S~SK~~~l~GlRiG~iv~-~~~~i~~~~~~~~~~----~--------------- 234 (337)
T PRK03967 178 YAEFS--GKSLIGLIDEYPN-LILLRTFSKAFGLAGIRAGYAIA-NEEIIDALYRIKPPF----S--------------- 234 (337)
T ss_pred hhhhc--ccchHHHHhhCCC-EEEEecchHhhcchhhhheeeec-CHHHHHHHHhhcCCC----C---------------
Confidence 96432 1111111111111 24568999999844 45677765 444433322111111 0
Q ss_pred cCCCcchHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccc
Q 046506 162 LSRRFRSLKLWFVLRNY-GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLL 240 (310)
Q Consensus 162 ~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
...+...++...+ ..+.+.+..++..+..+.+.+.|.+. .. ++.++.+.+.+
T Consensus 235 ----~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~-~~~~~~~~~~~------------------ 287 (337)
T PRK03967 235 ----LNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY----AY-PSDANFLLLKL------------------ 287 (337)
T ss_pred ----CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC----cC-CCCCcEEEEhH------------------
Confidence 0112222222222 23345555566666677788887753 11 34444443311
Q ss_pred hhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 241 SEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 241 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
.+.+.|.++|. .+.+......+.+|+++. +.++.+.++++|+.+.+.
T Consensus 288 -----------~~~~~l~~~gi-~v~~~~~~~~~~~Ri~~~----~~~~~~~l~~~l~~~~~~ 334 (337)
T PRK03967 288 -----------DAYDYLLENGI-VVRKLSGRLEGHIRVTVG----KREENDEFIKALKEIKEG 334 (337)
T ss_pred -----------HHHHHHHHCCE-EEEeCCCCCCCeEEEecC----CHHHHHHHHHHHHHHHHh
Confidence 14566666764 333221123468999844 467889999999887654
No 331
>PLN00144 acetylornithine transaminase
Probab=99.08 E-value=3.1e-08 Score=91.65 Aligned_cols=219 Identities=14% Similarity=0.098 Sum_probs=121.2
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCccccc--CC--hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAV--DT--LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~--~p--l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++|++.+.+. .+..|+++-..+..|.. .+ +++|.++|++||+++++|.++.+.............++ .
T Consensus 155 d~~~l~~~~~~~-----~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~-~ 228 (382)
T PLN00144 155 NLEAARKLIQKG-----KTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGV-E 228 (382)
T ss_pred CHHHHHHhcCCC-----CeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCC-C
Confidence 678999888432 24455555444554443 23 88999999999999999999976544332111001233 2
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
.| ..+..|.++...-.|++..+++ .. +.+... .+. . ++ ++-+..+..+.++++.+....
T Consensus 229 PD--i~t~sK~l~~G~pig~v~~~~~-~~-~~~~~~-~~~-~--------------T~-~~~pl~~aaa~a~l~~i~~~~ 287 (382)
T PLN00144 229 PD--IMTLAKPLAGGLPIGAVLVTEK-VA-SAINPG-DHG-S--------------TF-AGGPLVCNAALAVLDKISKPG 287 (382)
T ss_pred CC--EEEecccccCCcceEEEEEcHH-HH-hccCCC-CCC-C--------------CC-CCCHHHHHHHHHHHHHHhhch
Confidence 67 5555899986666777776533 32 222110 000 0 11 111223344555566664434
Q ss_pred HHHHHHHHHHHHHHHHHHH----cCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHH
Q 046506 183 LRHFLRSHVNMAKLFERLV----GSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESIN 258 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L----~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 258 (310)
+.+ +..++.+++++.| .+.|.+.-+.. ....+.+.+... ...+...+.
T Consensus 288 ~~~---~~~~~g~~l~~~l~~~~~~~~~~~~vrg-~G~~~~l~l~~~------------------------~~~~~~~~~ 339 (382)
T PLN00144 288 FLA---SVAKKGEYLRELLRRKLGGNPHVKEVRG-VGLLVGIQLDVP------------------------AGPLVDACR 339 (382)
T ss_pred HHH---HHHHHHHHHHHHHHHHHhhCCCceeeec-CceEEEEEecCc------------------------cHHHHHHHH
Confidence 433 3334444444443 34433321212 333444544211 135667777
Q ss_pred hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 259 ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 259 ~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+.|.... +. ....+||++++ ...++++++.+++.|.+.+..+
T Consensus 340 ~~Gv~i~-~~--~~~~~lrl~p~-~~~~~~~i~~~~~~l~~~l~~~ 381 (382)
T PLN00144 340 DSGLLVL-TA--GKGDVVRLVPP-LVISEAELEQAVEILADCLPAL 381 (382)
T ss_pred HCCeEEe-ec--CCCCEEEEeCC-CccCHHHHHHHHHHHHHHHHhc
Confidence 8886443 32 11378999965 4477999999999999887653
No 332
>PRK07036 hypothetical protein; Provisional
Probab=99.08 E-value=2.4e-08 Score=94.56 Aligned_cols=236 Identities=10% Similarity=0.038 Sum_probs=131.3
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhh-hcCCCCC
Q 046506 29 DSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF-IDGVEGA 103 (310)
Q Consensus 29 ~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~ 103 (310)
+.+++.|... .+..+..|++.-.....|.+.| +++|.++|++||+++++|..+.++......+... ..++ ..
T Consensus 207 ~~~~~~i~~~--~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv-~P 283 (466)
T PRK07036 207 DEFEDKILSL--GADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGI-QP 283 (466)
T ss_pred HHHHHHHHHc--CCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCC-CC
Confidence 4556666431 1123556777767777788877 9999999999999999999996654433221110 1233 37
Q ss_pred Ceeeeeccccccccc-ceEEEEEeCchhHHhhhccC--Cc--cccccccccccccCCCCceeccCCCcchHHHHHHHHHh
Q 046506 104 DSFSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLSTN--PE--YLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNY 178 (310)
Q Consensus 104 D~~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~~--~~--y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 178 (310)
|++++ .|.+++.+ .+|.+..+++ .. +.+... +. |... . ++ ++.+....+..++++.+
T Consensus 284 Divt~--gK~l~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~~~~~~-~------------T~-~gnpl~~aaa~a~Le~i 345 (466)
T PRK07036 284 DIITF--AKGLTSGYQPLGAVIISER-LL-DVISGPNAKGNVFTHG-F------------TY-SGHPVACAAALKNIEIM 345 (466)
T ss_pred CEEEE--ccccccCccccEEEEEcHH-HH-HHHhcccCcCcccccC-C------------CC-CCCHHHHHHHHHHHHHH
Confidence 88766 68887642 4677776544 32 333210 01 1100 0 11 11222333444455544
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC--CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHH
Q 046506 179 GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR--HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLES 256 (310)
Q Consensus 179 ~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 256 (310)
.. ++..++..++.++|++.|.++....++... ...++.+.+...... ..+... + ......+...
T Consensus 346 ~~---~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~---------~~~~~~-~-~~~~~~~~~~ 411 (466)
T PRK07036 346 ER---EGLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVECVADKGS---------KALLPE-D-IAIGQRIDRH 411 (466)
T ss_pred Hh---CCHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeceEEEEEEccCccc---------cCCCCc-h-hHHHHHHHHH
Confidence 32 356677777888888888654332222211 123444555321100 000000 0 1234567777
Q ss_pred HHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 257 INASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 257 l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
+.++|.+.. +. + ..+|+++. ...|++|||.+++++.+.+..+.
T Consensus 412 ~~~~Gvl~~-~~---~-~~~~l~Pp-l~it~~~id~~~~~l~~al~~~~ 454 (466)
T PRK07036 412 CQERGLLVR-PL---E-HLCVLSPP-LIITRAQIDEIVAILRAAIEETA 454 (466)
T ss_pred HHHCCcEEe-ec---C-CEEEEeCC-CcCCHHHHHHHHHHHHHHHHHHH
Confidence 888885443 21 2 46899855 46899999999999988887664
No 333
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.08 E-value=1.2e-08 Score=95.45 Aligned_cols=227 Identities=15% Similarity=0.086 Sum_probs=120.3
Q ss_pred cccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCC
Q 046506 24 YGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV 100 (310)
Q Consensus 24 ~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~ 100 (310)
+.+|+++|+ +.+ .+.++++...+|++|.+.+ +++|+++|++||+++++|.+++...-.. .+.......
T Consensus 167 ~~~d~~~l~--~~~------~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~-~~~~~~~~~ 237 (416)
T PRK09440 167 YHVDFEHLH--IDE------DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGI-IFSEATPLW 237 (416)
T ss_pred cCCCHHHcc--cCC------CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCc-chhhcCccc
Confidence 579999987 222 1457888888999999977 6778889999999999999996321100 000000000
Q ss_pred CCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCH
Q 046506 101 EGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGV 180 (310)
Q Consensus 101 ~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 180 (310)
..-=++..|+.|++....-+|+++. ++..+.........+... ...+...++...+..
T Consensus 238 ~~~vI~~~SfSK~~~pGlRiG~~i~-~~~l~~~~~~~~~~~~~~---------------------~s~~~q~~~~~~l~~ 295 (416)
T PRK09440 238 NPNIILCMSLSKLGLPGVRCGIVIA-DEEIIEALSNMNGIISLA---------------------PGRLGPAIAAEMIES 295 (416)
T ss_pred cCCeEEEecccccCCCcceEEEEeC-CHHHHHHHHHHHHHhccC---------------------CCcHHHHHHHHHhcc
Confidence 0011456899997443345666654 454433221111000000 012222333333322
Q ss_pred HHHH----H-HHHHHHHHHHHHHHHHcCC-C--CeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHH
Q 046506 181 ANLR----H-FLRSHVNMAKLFERLVGSD-K--RFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRE 252 (310)
Q Consensus 181 ~~~~----~-~~~~~~~~a~~l~~~L~~~-~--~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (310)
..+. + +.+...+..+.+.+.|.+. + ++.+..+..+..+.+.+.+... + ..+
T Consensus 296 ~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~gg~fiw~~~~~~~~--------------~-------~~~ 354 (416)
T PRK09440 296 GDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPEGAIFLWLWFKDLPI--------------T-------TEE 354 (416)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCCCceEEEEECCCCCC--------------C-------HHH
Confidence 1222 1 2233334444455555432 2 4555434345555555543110 0 134
Q ss_pred HHHHHHhcCcEEEEEeEE-CC--------EeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 253 LLESINASGKAYMTHAVL-GG--------IYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 253 l~~~l~~~g~~~~~~~~~-~~--------~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
+.+.+.+.|.....+... .+ .+++|+|+.. ++++++.+++.|++++...+
T Consensus 355 ~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~---~~~~l~~~i~~l~~~~~~~~ 413 (416)
T PRK09440 355 LYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ---DDEEIEKGIAILAEEVEKAY 413 (416)
T ss_pred HHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEecC---CHHHHHHHHHHHHHHHHHHh
Confidence 556666666544433222 11 2589999652 58999999999999887653
No 334
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.08 E-value=3.4e-08 Score=92.72 Aligned_cols=233 Identities=9% Similarity=0.050 Sum_probs=125.7
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCC
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGA 103 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 103 (310)
+++|++.+.... ....+..++++-...+.|.+.| +++|.++|++||+++++|.++++.........-...++ ..
T Consensus 184 ~~~l~~~l~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~-~p 261 (425)
T PRK08088 184 IASIERIFKNDA-APEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGV-AA 261 (425)
T ss_pred HHHHHHHHHhcc-CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCC-CC
Confidence 556888886321 1122456666666666677766 99999999999999999999875433221111001111 24
Q ss_pred CeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHH
Q 046506 104 DSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANL 183 (310)
Q Consensus 104 D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 183 (310)
| ..+..|.++.....|++..+ ++.. +.+... .+.. ++. +-+.....+.+.++.+ ..
T Consensus 262 d--i~s~sK~l~~G~rig~v~~~-~~~~-~~~~~~-~~~~---------------t~~-~~~~~~~a~~~~l~~~---~~ 317 (425)
T PRK08088 262 D--LTTFAKSIAGGFPLAGVTGR-AEVM-DAIAPG-GLGG---------------TYA-GNPIACAAALAVLKVF---EQ 317 (425)
T ss_pred C--EEEEeccccCCCcceeeEec-HHHH-hhcCCC-CCCC---------------CCC-cCHHHHHHHHHHHHHH---Hh
Confidence 5 46668999855556777654 3333 322111 0000 001 1112223333333333 23
Q ss_pred HHHHHHHHHHHHHHHHHHcC----CCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh
Q 046506 184 RHFLRSHVNMAKLFERLVGS----DKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA 259 (310)
Q Consensus 184 ~~~~~~~~~~a~~l~~~L~~----~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 259 (310)
++..++..+..+++.+.|.+ .|.+.-+..+ ...+.+.+...... ..+. ......+...+.+
T Consensus 318 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~-G~~~~l~l~~~~~~-----------~~p~---~~~~~~l~~~~~~ 382 (425)
T PRK08088 318 ENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGL-GAMIAIELFEDGDH-----------SKPN---AKLTAQIVARARD 382 (425)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEecc-ceEEEEEEecCCCC-----------CCCC---HHHHHHHHHHHHh
Confidence 34455555555555555543 3433222223 44455665321000 0000 1233567778888
Q ss_pred cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 260 SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 260 ~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.|.++..... ...++|++++ ...++++|+..++.|.+.+..+
T Consensus 383 ~Gv~~~~~~~--~~~~iRl~~~-~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 383 KGLILLSCGP--YYNVLRILVP-LTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred CCCEEecCCC--CCCEEEEECC-CCcCHHHHHHHHHHHHHHHHhh
Confidence 8865543211 1368999965 4688999999999999888654
No 335
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.08 E-value=3.6e-08 Score=92.40 Aligned_cols=229 Identities=14% Similarity=0.066 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCC
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGA 103 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 103 (310)
++.+++.+.... .+.....|++.-.....|.+.| +++|.++|++||+++++|.++.+.........-...++ ..
T Consensus 182 ~~~~~~~~~~~~-~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~-~p 259 (420)
T TIGR00700 182 LAAARAIFVIDV-GANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGP-EP 259 (420)
T ss_pred HHHHHHHHHhhc-CCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCC-CC
Confidence 566777764211 1123456666666666787766 99999999999999999999876544332111001122 36
Q ss_pred CeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHH
Q 046506 104 DSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANL 183 (310)
Q Consensus 104 D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 183 (310)
|+++ ..|.+++..-.|+++.+++ .. +.+.. ..... ++ ++-+....++.++++.+..+.+
T Consensus 260 Di~~--lsK~l~~G~pig~v~~~~~-i~-~~~~~--~~~~~--------------T~-~~~pl~~aaa~a~l~~l~~~~~ 318 (420)
T TIGR00700 260 DLIT--TAKSLADGLPLSGVTGRAE-IM-DAPAP--GGLGG--------------TY-AGNPLACAAALAVLAIIESEGL 318 (420)
T ss_pred CEEE--eeccccCCcceEEEEecHH-HH-hhcCC--CCcCC--------------CC-CcCHHHHHHHHHHHHHHHhccH
Confidence 7655 6899886556777776533 32 32211 00000 11 1112223334445655544443
Q ss_pred HHHHHHHHHHHHHHHHHHcC----CCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh
Q 046506 184 RHFLRSHVNMAKLFERLVGS----DKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA 259 (310)
Q Consensus 184 ~~~~~~~~~~a~~l~~~L~~----~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 259 (310)
.+ +..++.+++++.|.+ .|.+.-+.+ ...++.+.+..... ..+. ......+.+.+.+
T Consensus 319 ~~---~~~~~g~~l~~~L~~l~~~~~~~~~vrg-~G~~~~i~~~~~~~------------~~~~---~~~~~~l~~~~~~ 379 (420)
T TIGR00700 319 IE---RARQIGRLVTDRLTTLKAVDPRIGDVRG-LGAMIAVELVDPGT------------TEPD---AGLAERIATAAHA 379 (420)
T ss_pred HH---HHHHHHHHHHHHHHHHHhhCCCEEEeec-cceEEEEEEecCCC------------CCcc---HHHHHHHHHHHHH
Confidence 33 333344444444433 343332322 34445555532100 0000 2334566777778
Q ss_pred cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 260 SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 260 ~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
.|.+....... ..++|+++. .-.++++++.+++.|.+.+
T Consensus 380 ~Gv~i~p~~~f--~~~lRl~p~-l~~~~~~l~~~~~~l~~~l 418 (420)
T TIGR00700 380 AGLLLLTCGMF--GNIIRFLPP-LTIGDELLSEGLDILCAIL 418 (420)
T ss_pred CCeEEeccCCC--CCEEEEECC-CCcCHHHHHHHHHHHHHHh
Confidence 88654332211 368999955 3478999999999998875
No 336
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.08 E-value=1.8e-08 Score=91.61 Aligned_cols=222 Identities=12% Similarity=0.055 Sum_probs=134.2
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeec
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
+++.+|+. ++.+|.+++ +.++... +. . +.++++..++|++|.+.+.+++.+++ ++++++++|.
T Consensus 112 ~~~~~g~~---~~~v~~~~~--~~~~~~~----~~-~------~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE 174 (335)
T PRK14808 112 FAKAVGAK---FLEVPLTKD--LRIPEVN----VG-E------GDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDE 174 (335)
T ss_pred HHHHcCCe---EEEecCCCc--CCCChhH----cc-C------CCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEEC
Confidence 45677887 999999863 3554322 21 1 34788899999999999999999998 5899999999
Q ss_pred ccccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 82 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
++.-.. ............ -=++..|..|.++.| .-+|+++. +++.++........+..
T Consensus 175 ~Y~~f~--~~~~~~~~~~~~-~vi~~~S~SK~~~l~GlRvG~~v~-~~~~~~~l~~~~~~~~~----------------- 233 (335)
T PRK14808 175 AYYEFH--GESYVDLLKKYE-NLAVIRTFSKAFSLAAQRIGYVVS-SEKFIDAYNRVRLPFNV----------------- 233 (335)
T ss_pred chhhhc--CCchHHHHHhCC-CEEEEEechhhccCcccceEEEEe-CHHHHHHHHHhcCCCCC-----------------
Confidence 986432 111111111111 125668999999854 44677665 44444332111111000
Q ss_pred ccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccc
Q 046506 161 TLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLL 240 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
+. .....+.++++ ..+.+.+..+...+..+.+.+.|.+. |+++. ++..+.+.+.+....
T Consensus 234 --~~-~~q~a~~~~l~--~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~g~f~~~~l~~~~-------------- 292 (335)
T PRK14808 234 --SY-VSQMFAKVALD--HREIFEERTKFIVEERERMKSALREM-GYRIT-DSRGNFVFIFMEKEE-------------- 292 (335)
T ss_pred --CH-HHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEC-CCCCeEEEEeCCCcc--------------
Confidence 00 01111222222 22345666667777778888999886 77765 457777766654321
Q ss_pred hhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 241 SEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 241 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
..++.+.+.+.|.... .. ...+|+|+. +.++.++++++|++.
T Consensus 293 ---------~~~~~~~l~~~Gi~V~-~~----~~~~Risi~----~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 293 ---------KERLLEHLRAKNIAVR-SF----REGVRITIG----KREENDMILKELEVF 334 (335)
T ss_pred ---------HHHHHHHHHHCCeEEE-EC----CCCeEEecC----CHHHHHHHHHHHHhh
Confidence 1356777778875433 21 257999944 368899999998753
No 337
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.07 E-value=2.3e-08 Score=93.93 Aligned_cols=232 Identities=10% Similarity=0.006 Sum_probs=127.9
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|++++++.|.+.. .....|++.-...+.|.+.| +++|.++|++||+++++|.++.++ ...........++ .
T Consensus 186 d~~~l~~~l~~~~---~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv-~ 260 (428)
T PRK12389 186 DIEALKEALDKWG---DEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGV-E 260 (428)
T ss_pred CHHHHHHHHHhcC---CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCcchhhHHhCC-C
Confidence 6799999886432 12456777777777898888 999999999999999999999765 2221111001233 3
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhcc-CCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLST-NPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
.|.+++ .|.+++.+..|.+..+ ++.. +.+.. .+.+...+ + .+-+..+.+..++++.+..+
T Consensus 261 PDivt~--gK~lggG~Pi~av~~~-~~i~-~~~~~~~~~~~~~T--------------~-~gnpl~~Aaala~L~~l~~~ 321 (428)
T PRK12389 261 PDLTAL--GKIIGGGLPIGAYGGR-KDIM-EQVAPLGPAYQAGT--------------M-AGNPASMAAGIACLEVLQQE 321 (428)
T ss_pred CCeeee--chhhcCCCceeEEeEH-HHHH-hhhccCCCcccccC--------------C-ccCHHHHHHHHHHHHHHhcc
Confidence 787654 7988765557777554 3333 33311 11111111 0 11122334444555555333
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC----CC-eEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSD----KR-FEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLES 256 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~----~~-~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 256 (310)
+..++..++.++|++.|+++ +- ..+.. ...++.+.+....... ....... + ......+...
T Consensus 322 ---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r--~~g~~gi~~~~~~~~~------~~~~~~~--~-~~~~~~~~~~ 387 (428)
T PRK12389 322 ---GVYEKLDRLGAMLEEGILEAAEKHGITITINR--LKGALTVYFTDEKVTN------YDQAERS--D-GEAFGKFFKL 387 (428)
T ss_pred ---cHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEe--cCcEEEEEEeCCCCCC------hhhhccc--C-HHHHHHHHHH
Confidence 46677778888888888653 21 12211 1223444333210000 0000000 0 1233567777
Q ss_pred HHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 257 INASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 257 l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+.++|.+ +.+. +...+.+ + ...|++||+.+++++++.+.+
T Consensus 388 l~~~Gv~-~~~~---~~~~~~~--~-l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 388 MLNQGIN-LAPS---KYEAWFL--T-TAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred HHHCCcE-eecC---CCCCeee--c-CCCCHHHHHHHHHHHHHHHHh
Confidence 8888854 4332 1122333 3 467899999999999988754
No 338
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.07 E-value=3.5e-08 Score=92.96 Aligned_cols=227 Identities=10% Similarity=0.044 Sum_probs=125.5
Q ss_pred cEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeeeeecccccccccce
Q 046506 45 PLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDC 120 (310)
Q Consensus 45 ~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~ 120 (310)
...+++.-.....|.+.| +++|.++|++||+++++|..+.+.......+.....++ ..|.+++ .|.+++....
T Consensus 207 iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~~G~Pi 283 (442)
T TIGR00709 207 PAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGI-EPDFVVM--SKAVGGGLPL 283 (442)
T ss_pred eEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCC-CCcEEEE--cccccCCccc
Confidence 445555555555566543 88999999999999999999876654443222111233 3788884 7888775567
Q ss_pred EEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Q 046506 121 CCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERL 200 (310)
Q Consensus 121 g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~ 200 (310)
|.+..+++ + ..+. +..... + -++-+..+.+..++++.+..+ ...++..++.++|.+.
T Consensus 284 gav~~~~~--~-~~~~--~~~~~~--------------T-~~gnpla~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~ 340 (442)
T TIGR00709 284 AVLLIAPE--F-DAWQ--PAGHTG--------------T-FRGNQLAMVTGTEALNYWKDD---NLAQNAQERGERITSF 340 (442)
T ss_pred EEEEEchH--H-hccC--CCcCCC--------------C-CCcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHH
Confidence 88877644 2 2211 111000 1 111122333444555544333 4455666777777777
Q ss_pred HcCC-CCeEEecCC--CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEE
Q 046506 201 VGSD-KRFEVVFPR--HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIR 277 (310)
Q Consensus 201 L~~~-~~~~v~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iR 277 (310)
|+++ ..+.++... ....+.+.+.....+ ++. ....+.+ ......+...+.++|.+ +.+.. .+..++|
T Consensus 341 L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~---~~~-~~~~~~~----~~~~~~~~~~~~~~Gvl-~~~~~-~~~~~l~ 410 (442)
T TIGR00709 341 LDDMIKEHPCIGNVRGRGLMQGIMIVDERQS---KDA-TGAYPRD----CELAAAIQGACFENGLL-LETGG-REGEVFR 410 (442)
T ss_pred HHHHHHhCCCeeeeeccceEEEEEEccCccc---ccc-cccCCcc----hHHHHHHHHHHHHCCeE-EeecC-CCCCEEE
Confidence 7653 122222221 233444555321000 000 0000000 12345667777788854 33221 1246899
Q ss_pred EEccCCCCCHHHHHHHHHHHHHHHHHHhhcc
Q 046506 278 FAAGATLTEERHVMVAWTVVQEHLEALLSAS 308 (310)
Q Consensus 278 is~~~~~~t~edi~~li~~l~~~~~~~~~~~ 308 (310)
+.++ ...|++||+.+++++.+.+.++.+.+
T Consensus 411 ~~Pp-l~it~~ei~~~~~~l~~~l~~~~~~~ 440 (442)
T TIGR00709 411 LLCP-ITIDQEECEEGISRFKQAVEEALAEV 440 (442)
T ss_pred EECC-CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9955 67999999999999999998775543
No 339
>PLN02368 alanine transaminase
Probab=99.07 E-value=1.1e-08 Score=95.26 Aligned_cols=192 Identities=11% Similarity=0.031 Sum_probs=115.5
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
+...|.. ++.+|+++.+++.+|+++|++++++....+.++.++++..++|++|.+.+ +++|+++|++||+++++
T Consensus 172 ~~~~g~~---~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~ 248 (407)
T PLN02368 172 ISLLGGT---LVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLG 248 (407)
T ss_pred HHHcCCE---EEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 3456665 89999987545789999999999864332223567888888999999876 66788899999999999
Q ss_pred ecccccccccCh-hh---hhhhcCC----C-CCC-eeeeeccccc-ccc-cceEEEEE--eCchhHHhhhccCCcccccc
Q 046506 80 DAAYAGSACICP-EF---RHFIDGV----E-GAD-SFSLNAHKWF-FTT-LDCCCLWV--KDPSDLVNSLSTNPEYLKNK 145 (310)
Q Consensus 80 D~a~~~~~~~~~-~~---~~~~~~~----~-~~D-~~~~~~hK~l-~~p-~g~g~l~v--~~~~~~~~~~~~~~~y~~~~ 145 (310)
|.+++-..+... .+ ......+ . ... ++..|+.|.+ +.| .-+|++++ .++..+....... .....
T Consensus 249 DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~--~~~~~ 326 (407)
T PLN02368 249 DEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVA--SIALS 326 (407)
T ss_pred EccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHh--cccCC
Confidence 999865543211 11 1111111 0 112 4457889997 333 44677764 3444443322110 00000
Q ss_pred ccccccccCCCCceeccCCCcchHHHHHHHHHhCH------------HHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC
Q 046506 146 ATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGV------------ANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR 213 (310)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------------~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~ 213 (310)
...+..+++...+.. +...++.+...+..+.+.+.|.++||+.+. .|
T Consensus 327 --------------------~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~-~P 385 (407)
T PLN02368 327 --------------------PNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCN-FT 385 (407)
T ss_pred --------------------CCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeC-CC
Confidence 111222233333311 112345677788889999999999998875 55
Q ss_pred CceEEEE
Q 046506 214 HFAVVCF 220 (310)
Q Consensus 214 ~~~~v~~ 220 (310)
+.....|
T Consensus 386 ~Gafy~~ 392 (407)
T PLN02368 386 EGAMYSF 392 (407)
T ss_pred CeeeEec
Confidence 6555544
No 340
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.07 E-value=1.9e-08 Score=94.42 Aligned_cols=236 Identities=11% Similarity=0.062 Sum_probs=121.8
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++|++.|.... ..+..|++....+++|.+.| +++|.++|++||+++++|.+|.+. ...........++ .
T Consensus 181 d~~~l~~~i~~~~---~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~-r~g~~~~~~~~~~-~ 255 (423)
T TIGR00713 181 DLEALEEVFEEYG---EEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGF-RVALGGAQEYFGV-E 255 (423)
T ss_pred CHHHHHHHHHHcC---CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccccc-ccCcchhHHHhCC-C
Confidence 7899999997421 12446666555555788877 789999999999999999999655 2211111111222 2
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccC-CccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTN-PEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~-~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
.|.+ +..|.+++..-.|+++.+ ++.. +.+... ..+.... -++-+....+..++++.+..+
T Consensus 256 pDi~--t~sK~l~~G~pig~v~~~-~~i~-~~~~~~~~~~~~~T---------------~~~~~~~~aaa~a~l~~~~~~ 316 (423)
T TIGR00713 256 PDLT--TLGKIIGGGLPVGAFGGR-REIM-ERLAPEGPVYQAGT---------------LSGNPLAMAAGLATLKLLDEE 316 (423)
T ss_pred cchh--hhhhhhcCCCceeeeeEH-HHHH-HhhCcCCCeeeccC---------------CCCCHHHHHHHHHHHHHHhcc
Confidence 5755 568998743346766654 3333 332110 0011100 011122334444555554332
Q ss_pred -HHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhc
Q 046506 182 -NLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINAS 260 (310)
Q Consensus 182 -~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 260 (310)
.++...+....+.+.+.+.+.+. ++.........++.+.+....... .... ... + ......+.+.+.++
T Consensus 317 ~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~g~~~~v~~~~~~~~~-----~~~~-~~~--~-~~~~~~~~~~l~~~ 386 (423)
T TIGR00713 317 GVYTELDELAKRLAEGLSEVLEDT-GIPHTVNRVGSMFSLFFTEEEVTN-----YADA-KKS--D-TELFAKFFHEMLDK 386 (423)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEeeccEEEEEEecCCCCC-----hhhh-hcc--c-HHHHHHHHHHHHHC
Confidence 23333333334444444444444 333211123444554443211000 0000 000 0 11224567778787
Q ss_pred CcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 261 GKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 261 g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
|. ++.+. +.+.+|+++. .|++|++.+++.|.+.+.+
T Consensus 387 Gv-~v~~~---~~~~~~l~~~---~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 387 GV-FLPPS---QFEACFLSAA---HTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred Ce-EEecC---CccceeeECC---CCHHHHHHHHHHHHHHHhh
Confidence 74 44432 2245788732 6899999999999887754
No 341
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.07 E-value=5.5e-08 Score=91.13 Aligned_cols=230 Identities=11% Similarity=0.039 Sum_probs=126.9
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccc-cCC---hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITA-VDT---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~-~~p---l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
+++++++.+.... .+.....|++.-.....|. +.| +++|.++|++||+++++|.++.+.............++ .
T Consensus 182 ~~~~l~~~~~~~~-~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~-~ 259 (421)
T PRK06777 182 ALSSVERLFKADI-APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDV-K 259 (421)
T ss_pred HHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCC-C
Confidence 3667888875421 1112445666655666675 344 99999999999999999999875433332111001122 2
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
.|++ +..|.+++....|++..++. .. +.+... .+ .. ++ ++-+....+..++++.+..
T Consensus 260 pDiv--~~sK~l~~G~pigav~~~~~-i~-~~~~~~-~~-~~--------------T~-~~~p~~~aaa~a~L~~~~~-- 316 (421)
T PRK06777 260 PDLI--TMAKSLGGGMPISAVVGRAE-VM-DAPAPG-GL-GG--------------TY-AGNPLAVAAALAVLDVIAE-- 316 (421)
T ss_pred CCEE--eeehhhcCCCceEEEEEcHH-HH-hccCCC-CC-CC--------------CC-CcCHHHHHHHHHHHHHHHh--
Confidence 6765 46898875445777766533 32 322110 00 00 11 1112233344445544422
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC----CCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHH
Q 046506 183 LRHFLRSHVNMAKLFERLVGSD----KRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESIN 258 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~----~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 258 (310)
+++.++..++.+++++.|+++ |.+.-+ .+...++.+.+..... ..+. ..+...+...+.
T Consensus 317 -~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-rg~G~~~~i~~~~~~~------------~~~~---~~~~~~l~~~~~ 379 (421)
T PRK06777 317 -EKLCQRALILGAHLVEVLEKAKASCPAIVDI-RARGSMVAVEFNDPQT------------GKPS---PEFTRQYQRQAL 379 (421)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-cCceEEEEEEEecCcc------------CCcc---HHHHHHHHHHHH
Confidence 456777777888888888764 333222 2334444444432100 0000 223455666677
Q ss_pred hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 259 ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 259 ~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
++|.+ +.+... ...++||++. ...++++++.+++.|.+.+
T Consensus 380 ~~Gv~-i~~~~~-~g~~lr~~pp-l~i~~~~i~~~~~~l~~~l 419 (421)
T PRK06777 380 EEGLL-LLSCGV-HGNVIRFLYP-LTIPDAQFSKALNILTRLL 419 (421)
T ss_pred hCCeE-EeecCC-CCCEEEEeCC-CCCCHHHHHHHHHHHHHHH
Confidence 77754 443211 1358999955 4689999999999998765
No 342
>PRK06149 hypothetical protein; Provisional
Probab=99.06 E-value=2.4e-08 Score=102.55 Aligned_cols=235 Identities=9% Similarity=-0.018 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhh-hhcCCCC
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRH-FIDGVEG 102 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~-~~~~~~~ 102 (310)
.+++++.+......+..+..|++.-...+.|.+.| +++|.++|++||+++++|.+|.++......+.. -..++ .
T Consensus 728 ~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv-~ 806 (972)
T PRK06149 728 VRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGV-V 806 (972)
T ss_pred HHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCC-C
Confidence 35666666543333334566777777777788888 999999999999999999999555433321100 01233 3
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
.|++++ .|.+++....|++..+++ .. +.+... .+.+. ++ ++-+..+.+..++++.+..+
T Consensus 807 PDivt~--gK~lg~G~Pl~av~~~~~-i~-~~~~~~-~~~~s--------------T~-~gnP~~~aaala~L~~i~~e- 865 (972)
T PRK06149 807 PDIITM--AKGMGNGHPLGAVITRRE-IA-EALEAE-GYFFS--------------ST-GGSPVSCRIGMAVLDVLREE- 865 (972)
T ss_pred CCEEEe--cccccCCeeeEEEEEcHH-HH-hhhccC-CcccC--------------CC-CCCHHHHHHHHHHHHHHHhc-
Confidence 788855 798886555777777654 32 333211 11111 11 22223334445555555333
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC-CCeEEecCC--CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh
Q 046506 183 LRHFLRSHVNMAKLFERLVGSD-KRFEVVFPR--HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA 259 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 259 (310)
++.++..++.++|+++|+++ ....++... ...++.+.+..... ...+ . ......+.+.+.+
T Consensus 866 --~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~---------~~~~-~----~~~~~~i~~~l~~ 929 (972)
T PRK06149 866 --KLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQ---------TLEP-A----TEETAAICDRLLE 929 (972)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcc---------cCCC-C----hHHHHHHHHHHHh
Confidence 45666667777777777654 112222211 12334444432100 0000 0 1234567788888
Q ss_pred cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 260 SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 260 ~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+|.+ +.+.. ....+|||.+. .-.|++||+.++++|.+.+.+
T Consensus 930 ~Gvl-~~~~g-~~~~vl~~~Pp-l~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 930 LGVI-MQPTG-DHLNILKIKPP-LCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred CCeE-EeecC-CCCCEEEEECC-CcCCHHHHHHHHHHHHHHHHh
Confidence 8854 43321 11368999855 568999999999999988754
No 343
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.05 E-value=2.8e-08 Score=90.47 Aligned_cols=200 Identities=13% Similarity=0.012 Sum_probs=120.1
Q ss_pred EEEEeccCCcccccCChHHHHHH---HHHhCcEEEeecccccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEE
Q 046506 47 FLCATIGTTAITAVDTLKPLCDV---AKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCC 122 (310)
Q Consensus 47 ~v~~~~~~~~~G~~~pl~~I~~l---~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~ 122 (310)
.+++..++|++|.+.+.+++.++ |++++.++++|.++.-+... +...... ...+ =++..|..|.++.| .-+|+
T Consensus 133 ~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~-~s~~~~~-~~~~-vi~l~SfSK~~gl~GlRiGy 209 (339)
T PRK06959 133 HLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA-ASLAAHT-DRPG-LVVLRSVGKFFGLAGVRAGF 209 (339)
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc-ccchhcc-CCCC-EEEEecChhhcCCcchheEE
Confidence 57777889999999886666554 66789999999998654311 1111111 1011 15668999998755 44676
Q ss_pred EEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHHHHH
Q 046506 123 LWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGV-ANLRHFLRSHVNMAKLFERLV 201 (310)
Q Consensus 123 l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~a~~l~~~L 201 (310)
++. +++.+........++.. ..+...++...+.. +..++..++..+..+++.+.|
T Consensus 210 ~v~-~~~li~~l~~~~~~~~v-----------------------s~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L 265 (339)
T PRK06959 210 VLA-APALLAALRDALGAWTV-----------------------SGPARHAVRAAFADAAWQAAMRERLAADGARLAALL 265 (339)
T ss_pred Eec-CHHHHHHHHHhcCCCCC-----------------------cHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 664 45444333221111110 11222233333322 345566777788888999999
Q ss_pred cCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEcc
Q 046506 202 GSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAG 281 (310)
Q Consensus 202 ~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~ 281 (310)
+++ ++++. +..+.+.+.... ..++.+.|.++|... .. ....+++|+|+.
T Consensus 266 ~~~-g~~~~--~~~~f~~~~~~~-------------------------~~~l~~~l~~~GI~v-r~--~~~~~~lRisi~ 314 (339)
T PRK06959 266 RAH-GFAVH--ATPLFSWTDDPR-------------------------AAALHAALARRGIWT-RY--FAPPPSVRFGLP 314 (339)
T ss_pred HHC-CCCcc--CcceEEEEeCCC-------------------------HHHHHHHHHhCCeEE-EE--CCCCCeEEEECC
Confidence 887 77664 223333333321 135777788887543 22 234468999943
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhc
Q 046506 282 ATLTEERHVMVAWTVVQEHLEALLSA 307 (310)
Q Consensus 282 ~~~~t~edi~~li~~l~~~~~~~~~~ 307 (310)
.++++.++++++|+++.+.+...
T Consensus 315 ---~~~~e~~~l~~al~~~~~~~~~~ 337 (339)
T PRK06959 315 ---ADEAEWQRLEDALAECVPTLAAA 337 (339)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHhhc
Confidence 35779999999999998887654
No 344
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.05 E-value=2.7e-08 Score=90.32 Aligned_cols=219 Identities=11% Similarity=0.044 Sum_probs=125.5
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++.+|+. ++.||.+ ++++++. . +.++++..++|+||.+.+ +++|+++|+++|+++++
T Consensus 103 ~~~~g~~---~~~v~~~----------~~~~~~~-~------~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~ 162 (330)
T PRK05664 103 WRRAGHQ---VRELDEA----------EVEAALD-S------LDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVV 162 (330)
T ss_pred HHHcCCe---EEEechh----------hHhhhhc-C------CCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEE
Confidence 4556665 6666653 3455553 2 225677788899999888 55566677899999999
Q ss_pred ecccccccccChhhhhhhcCCCCCC--eeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 80 DAAYAGSACICPEFRHFIDGVEGAD--SFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~~~D--~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
|.++..+. +.+.. ..+..-| ++..|..|.++.| .-+|+++. ++..+.........+..
T Consensus 163 DE~y~~~~-~~~s~----~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~-~~~l~~~~~~~~~~~~~------------- 223 (330)
T PRK05664 163 DEAFMDNT-PQHSL----AACAHRPGLIVLRSFGKFFGLAGARLGFVLA-EPALLRALAELLGPWTV------------- 223 (330)
T ss_pred ECCcccCC-Ccccc----cccccCCCEEEEeeccccccCCCcceEEEEe-CHHHHHHHHHhcCCCCC-------------
Confidence 99985332 11111 1111112 5779999999744 45677665 45444333211111110
Q ss_pred CceeccCCCcchHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhh
Q 046506 157 DWQITLSRRFRSLKLWFVLRNYG-VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
......++...+. .+..++..++..+..+.+.+.|.+. +++.. ......+.+... +
T Consensus 224 ----------~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~-~~~~~f~~~~~~--~--------- 280 (330)
T PRK05664 224 ----------SGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRH-GLTPA-GGCALFQWVRTE--D--------- 280 (330)
T ss_pred ----------CHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CCcceEEEEecC--C---------
Confidence 1111122222222 2334566677777888899999876 55422 111233333322 1
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
..++.+.+.+.|.... . ....+.+|+++.. ++++.++++++|+.+.++
T Consensus 281 --------------~~~~~~~l~~~gi~v~-~--f~~~~~iRis~~~---~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 281 --------------AAALHEFLARRGILTR-L--FEQPASLRFGLPA---DEADWARLDQALLAYRKE 328 (330)
T ss_pred --------------HHHHHHHHHHCCeEEE-E--CCCCCeEEEECCC---CHHHHHHHHHHHHHHHhh
Confidence 1356677777775443 2 2245689999552 578899999999887654
No 345
>PRK06148 hypothetical protein; Provisional
Probab=99.04 E-value=3.1e-08 Score=101.89 Aligned_cols=235 Identities=12% Similarity=0.050 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccCh-hhhhhhcCCCCC
Q 046506 29 DSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICP-EFRHFIDGVEGA 103 (310)
Q Consensus 29 ~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~-~~~~~~~~~~~~ 103 (310)
+.+++.|......+..+..+++.-.....|.+.| ++++.++|++||+++++|..+.++...+. .+.-...++ ..
T Consensus 769 ~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv-~P 847 (1013)
T PRK06148 769 ESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGV-VP 847 (1013)
T ss_pred HHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCC-Cc
Confidence 4577777542222233556677666666788777 99999999999999999999966543332 111001233 37
Q ss_pred CeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHH
Q 046506 104 DSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANL 183 (310)
Q Consensus 104 D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 183 (310)
|++++ .|.+++....|.+..+++ .. +.+.....+. + + -++-+..+.+..++++.+..
T Consensus 848 Divt~--gK~lggG~Plgav~~~~e-i~-~~~~~g~~~~-~--------------T-f~gnpla~aaa~a~L~~i~~--- 904 (1013)
T PRK06148 848 DIVTM--GKPIGNGHPMGAVVTTRE-IA-DSFDNGMEYF-N--------------T-FGGNPVSCAIGLAVLDIIED--- 904 (1013)
T ss_pred ceeee--cccccCCcceEEEEEcHH-HH-hhccCCCccc-c--------------C-CCCCHHHHHHHHHHHHHHhh---
Confidence 88777 798887667888877644 32 3322110111 0 1 11212233344445554433
Q ss_pred HHHHHHHHHHHHHHHHHHcCC-CCeEEecCC-C-ceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhc
Q 046506 184 RHFLRSHVNMAKLFERLVGSD-KRFEVVFPR-H-FAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINAS 260 (310)
Q Consensus 184 ~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~~-~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 260 (310)
++..++..++.++|+++|+++ ....++... . ..++.+.+...... ..+ .......+.+.+.++
T Consensus 905 e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~-----------~~~---~~~~~~~i~~~~~~~ 970 (1013)
T PRK06148 905 EDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKT-----------KAP---ATAIARYVKNGARER 970 (1013)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccc-----------cCc---cHHHHHHHHHHHHhC
Confidence 345666777777887777654 122222211 1 23344544321100 000 022345677888888
Q ss_pred CcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 261 GKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 261 g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
|.+. .+.. ....++||.++ .-+|++|||.++++|.+.+.++
T Consensus 971 Gvl~-~~~g-~~~~vlr~~Pp-l~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 971 GILI-GTEG-PHDNVLKIRPP-LIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred CeEE-eccC-CCCCEEEEeCC-ccCCHHHHHHHHHHHHHHHHHH
Confidence 8544 3221 12468999955 6799999999999999988764
No 346
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.04 E-value=2.1e-08 Score=95.43 Aligned_cols=268 Identities=12% Similarity=0.093 Sum_probs=138.3
Q ss_pred EEEEecCCCCC-----cccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHh--CcEEEeecc
Q 046506 13 FRAIKTTKSSS-----YGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQF--GIWVHVDAA 82 (310)
Q Consensus 13 v~~v~~~~~~~-----~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~--g~~l~vD~a 82 (310)
++.|++++.+. |.+|+++|++++++. +.+++++.++|++|.+.+ +++|+++|++| ++++++|.+
T Consensus 210 vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~------~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEv 283 (521)
T TIGR03801 210 VVRIKADEMTEDGTHTWQYPDKELEKLRDPS------IKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDV 283 (521)
T ss_pred EEEeecccccccccccCCCCHHHHHHhcCCC------CcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCC
Confidence 67777765322 789999999887654 347777789999999987 77788899987 899999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhcc---------CCcccccc-cccccc
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLST---------NPEYLKNK-ATESKQ 151 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~---------~~~y~~~~-~~~~~~ 151 (310)
++..... +.........--+++.|..|.++.| .-+|+++..+...+++.... ...|-.-. .+..-.
T Consensus 284 Y~~f~~~---~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~ 360 (521)
T TIGR03801 284 YGTFVDD---FRSLFAELPYNTIGVYSFSKYFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLK 360 (521)
T ss_pred chhhccc---ccchhhhCCCCEEEEEcchhhccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhh
Confidence 9754321 1111111111125668999998654 44667665543222111100 00010000 000000
Q ss_pred ccC-----CC---C-ceeccCCCc-chHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEe-cCCCceEE
Q 046506 152 VVD-----YK---D-WQITLSRRF-RSLKLWFVLRNY--GVANLRHFLRSHVNMAKLFERLVGSDKRFEVV-FPRHFAVV 218 (310)
Q Consensus 152 ~~~-----~~---~-~~~~~~~~~-~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~-~~~~~~~v 218 (310)
.+| .+ . .+.-.+.+. ...++.++...+ .....++..+.+.+..+.+.+.| |+.+. .++.....
T Consensus 361 fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~~~~y~~~~~~~~~~R~~~l~~~L----g~~~~~~~~~g~~Y 436 (521)
T TIGR03801 361 FIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDKENAYKAETKDICRRREKLLFRGL----GLPLQEDPNDVAYY 436 (521)
T ss_pred hHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhc----CCCCcCCCCCeEEE
Confidence 000 00 0 000001111 111211222222 23345566667777777777777 33321 24454433
Q ss_pred E-EEEcCCcchhhhhhhhccccchhHHHHHH-----HHHHHHHHHHhc-CcEEEEEeEEC-CEeEEEEEccCCCCCHHHH
Q 046506 219 C-FRVSPSAVMDKLKTKYENSLLSEEERINE-----FNRELLESINAS-GKAYMTHAVLG-GIYAIRFAAGATLTEERHV 290 (310)
Q Consensus 219 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~l~~~-g~~~~~~~~~~-~~~~iRis~~~~~~t~edi 290 (310)
. +.+.... ...++ .+...- -..++..+|.++ |...+++...+ ....+|+|+.+ .+++++
T Consensus 437 ~~~di~~~~-----~~~~~------~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRisla~--l~~~~~ 503 (521)
T TIGR03801 437 TLIDLEEWA-----EKNYG------EEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGPEWSVRVSLAN--LNEYDY 503 (521)
T ss_pred EEeehHHHH-----HHhcc------hHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCCCCeEEEEecC--CCHHHH
Confidence 3 3332210 00000 000000 123566666655 44444444333 24579999763 678899
Q ss_pred HHHHHHHHHHHHHHhh
Q 046506 291 MVAWTVVQEHLEALLS 306 (310)
Q Consensus 291 ~~li~~l~~~~~~~~~ 306 (310)
..+.+.|++++.+...
T Consensus 504 ~~~~~rl~~~~~~~~~ 519 (521)
T TIGR03801 504 AEIGRAIRKILDEYYE 519 (521)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999998876543
No 347
>PRK07481 hypothetical protein; Provisional
Probab=99.03 E-value=4.9e-08 Score=92.13 Aligned_cols=222 Identities=12% Similarity=0.038 Sum_probs=122.3
Q ss_pred cEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeeeeeccccccccc-c
Q 046506 45 PLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTL-D 119 (310)
Q Consensus 45 ~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~-g 119 (310)
+..|++.-.....|.+.| ++++.++|++||+++++|..+.++......+.....++ ..|++++ .|.+++.+ .
T Consensus 214 iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~gG~~P 290 (449)
T PRK07481 214 IAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGV-KPDIMCL--AKGITSGYVP 290 (449)
T ss_pred EEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCC-CCCEEEE--eecccCCCcC
Confidence 456666666666677666 99999999999999999999876544332221111233 3788777 68887542 4
Q ss_pred eEEEEEeCchhHHhhhccCCc---cccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 046506 120 CCCLWVKDPSDLVNSLSTNPE---YLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKL 196 (310)
Q Consensus 120 ~g~l~v~~~~~~~~~~~~~~~---y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~ 196 (310)
.|.+.++++ .. +.+..... .+.... + .++.+....+..++++.+.+ ++..++..++.++
T Consensus 291 i~av~~~~~-i~-~~~~~~~~~~~~~~h~~------------T-~~gnpl~~aaa~a~L~~l~~---~~l~~~~~~~g~~ 352 (449)
T PRK07481 291 LGATMVNAR-IA-DAFEANADFGGAIMHGY------------T-YSGHPVACAAALATLDIVVR---EDLPANAAKRGAY 352 (449)
T ss_pred ceEEEEcHH-HH-HHHhccCccccccccCC------------C-CCCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHH
Confidence 677776654 32 33321100 000000 0 11122233444445554433 3456666677777
Q ss_pred HHHHHcCCC-CeEEecCC--CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCE
Q 046506 197 FERLVGSDK-RFEVVFPR--HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGI 273 (310)
Q Consensus 197 l~~~L~~~~-~~~v~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~ 273 (310)
|++.|+++. ...++... ...++.+.+..... ...+.+. .......+...+.++|.+. .+. +
T Consensus 353 l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~---------~~~~~~~--~~~~~~~~~~~~~~~Gvl~-~~~---g- 416 (449)
T PRK07481 353 LLEGLQPLKERFELVGDVRGKGLMLALDLVADKA---------TREPIDP--SKGYANAVADVARENGVLV-RPS---G- 416 (449)
T ss_pred HHHHHHHHhhcCCCeEEEeecceEEEEEeccccc---------ccCCCCc--hhHHHHHHHHHHHhCCeEE-Eec---C-
Confidence 777776541 22222221 12344454432100 0000000 0123456777788888543 322 2
Q ss_pred eEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 274 YAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 274 ~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
..+|+++. ...|++|||.+++++.+.+.++
T Consensus 417 ~~i~l~Pp-l~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 417 TKIILSPP-LVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred CEEEEECC-CCCCHHHHHHHHHHHHHHHHhc
Confidence 35899855 4579999999999999988764
No 348
>PRK07483 hypothetical protein; Provisional
Probab=99.01 E-value=6.6e-08 Score=91.08 Aligned_cols=242 Identities=13% Similarity=0.069 Sum_probs=129.9
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEeccCC-cccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCC
Q 046506 29 DSLMAKINSDVEAGLIPLFLCATIGTT-AITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGA 103 (310)
Q Consensus 29 ~~Le~~i~~~~~~~~~~~~v~~~~~~~-~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 103 (310)
++++++|.... ......|++.-... ..|.+.| +++|.++|++||+++++|..+.++......+.....++ ..
T Consensus 186 ~~l~~~~~~~~--~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~P 262 (443)
T PRK07483 186 DELEAKILELG--PDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGV-AP 262 (443)
T ss_pred HHHHHHHHhcC--CCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCC-CC
Confidence 56676665311 11234455544432 3466655 89999999999999999999876654443322111233 37
Q ss_pred Ceeeeeccccccccc-ceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 104 DSFSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 104 D~~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
|++++ .|.+++.+ ..|.+.++++ .. +.+...+..+...+ + .++-+....+..++++.+.+
T Consensus 263 Div~~--gK~l~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~h~~------------T-~~gnpl~~aaa~a~l~~i~~-- 323 (443)
T PRK07483 263 DLVTI--AKGLGAGYQPIGAVLASDR-IY-DAIADGSGFFQHGH------------T-YLGHATACAAALAVQRVIAE-- 323 (443)
T ss_pred Ceeee--hhhhccCccccEEEEEcHH-HH-HHHhcCCCccccCC------------C-CCCCHHHHHHHHHHHHHHHh--
Confidence 88887 68887653 5777777655 32 33321111111100 0 01112223334444444433
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC-CCeEEecCC--CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh
Q 046506 183 LRHFLRSHVNMAKLFERLVGSD-KRFEVVFPR--HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA 259 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 259 (310)
+...++..++.++|++.|+++ ....++... ...++.+.+..... ...+.+. -......+.+.+.+
T Consensus 324 -~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~---------~~~~~~~--~~~~~~~~~~~~~~ 391 (443)
T PRK07483 324 -DGLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRA---------TKAPFDP--ALKLHARIKREAMA 391 (443)
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeeccc---------ccCCCCc--hhhHHHHHHHHHHH
Confidence 345666667777777777642 222222221 12334444432100 0000010 01234567778888
Q ss_pred cCcEEEEEe-EEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 260 SGKAYMTHA-VLG--GIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 260 ~g~~~~~~~-~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
+|.+..... ... ...++||.++ ...|++|||.++++|.+.+.++.
T Consensus 392 ~Gll~~~~~~~~~~~~~~~l~~~Pp-L~it~~eid~~~~~l~~~l~~~~ 439 (443)
T PRK07483 392 RGLMVYPMGGTIDGVRGDHVLLAPP-FIITAAQIDEIVERLGDAIDAAL 439 (443)
T ss_pred CCcEEEecCccccCCCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 886543211 000 1358999955 67999999999999999987754
No 349
>PRK08354 putative aminotransferase; Provisional
Probab=99.01 E-value=3.2e-08 Score=89.00 Aligned_cols=87 Identities=11% Similarity=-0.019 Sum_probs=60.3
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
+|++.|++.+.+ +..+++..++|++|.+.+ +++|+++|+++|+++++|.+++.+..... . .. ..
T Consensus 106 ~d~~~l~~~~~~-------~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~---~-~~--~~ 172 (311)
T PRK08354 106 NDPEKLEELVER-------NSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPE---S-PE--GE 172 (311)
T ss_pred CCHHHHHHhhcC-------CCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhcccccc---c-cC--CC
Confidence 678888888752 226777788999999877 56677888999999999999965433211 0 01 11
Q ss_pred CCeeeeecccccccc-cceEEEEE
Q 046506 103 ADSFSLNAHKWFFTT-LDCCCLWV 125 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p-~g~g~l~v 125 (310)
--++..|..|.++.| .-+|+++.
T Consensus 173 ~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 173 NIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred cEEEEeccHhhcCCccceeeeeee
Confidence 235668889999855 34676665
No 350
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.00 E-value=2.1e-08 Score=95.50 Aligned_cols=268 Identities=12% Similarity=0.082 Sum_probs=136.8
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHH--hCcEEEeeccccccc
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQ--FGIWVHVDAAYAGSA 87 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~--~g~~l~vD~a~~~~~ 87 (310)
++.++.++.+.+.+|+++|++++++. +.+++++.++|++|.+.+ +++|+++|++ +++++++|.+++-..
T Consensus 216 ~v~v~~~~~~~f~~d~~~l~~~~~~~------tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~ 289 (527)
T PRK09275 216 VVHINADEENEWQYPDSELEKLRDPS------IKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFV 289 (527)
T ss_pred EEEeecCcccCCCCCHHHHHhhcCCC------CCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhc
Confidence 45555555445899999999988654 347778889999999887 7788899965 599999999997543
Q ss_pred ccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccC---------Ccccccc-ccccccccC--
Q 046506 88 CICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTN---------PEYLKNK-ATESKQVVD-- 154 (310)
Q Consensus 88 ~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~---------~~y~~~~-~~~~~~~~~-- 154 (310)
.. +.........--+++.|..|.++.| .-.|++...++..+++....- ..|-.-. .+..-..++
T Consensus 290 ~~---~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrl 366 (527)
T PRK09275 290 DD---FRSLFAVLPYNTILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRL 366 (527)
T ss_pred cc---ccCHHHhCCCCEEEEeehhhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHH
Confidence 21 1111111111235668889998755 335666654432221111000 0010000 000000000
Q ss_pred ---CC---Cc-eeccCCCc-chHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEE-EEc
Q 046506 155 ---YK---DW-QITLSRRF-RSLKLWFVLRNY--GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCF-RVS 223 (310)
Q Consensus 155 ---~~---~~-~~~~~~~~-~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~-~~~ 223 (310)
.+ .. +.-.+.+. .++++.+....+ .....++..+.+.+..+.+.+.|. . .+.. .+|......| .+.
T Consensus 367 vad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~~~~~~~~~~Rr~~l~~~Lg-~-~~~~-~~p~g~fY~~~di~ 443 (527)
T PRK09275 367 VADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYKKAMKDIIRRRYKALYEGLG-L-PEPE-DPNNAAYYTLIDLE 443 (527)
T ss_pred HHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHcC-C-CCcC-CCCCeeEEEEEEhH
Confidence 00 00 00001110 111211111112 233456666777777777777773 2 2221 2455544433 232
Q ss_pred CCcchhhhhhhhccccchhHHHHH-----HHHHHHHHHHHhcCcE-EEEEeEEC-CEeEEEEEccCCCCCHHHHHHHHHH
Q 046506 224 PSAVMDKLKTKYENSLLSEEERIN-----EFNRELLESINASGKA-YMTHAVLG-GIYAIRFAAGATLTEERHVMVAWTV 296 (310)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~l~~~g~~-~~~~~~~~-~~~~iRis~~~~~~t~edi~~li~~ 296 (310)
... ...+ +.+... .-..++..+|.++..+ .+++...+ ..+.+|+|+.+ .+++++..+.+.
T Consensus 444 ~~~-----~~~~------g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~a~--~~~~~~~~~~~r 510 (527)
T PRK09275 444 EWA-----EKNY------GKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEWSVRVSLAN--LNEEDYAKIGKA 510 (527)
T ss_pred Hhh-----hhcc------CchhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCCeEEEEEec--CCHHHHHHHHHH
Confidence 210 0000 000000 0023555666655444 44444333 35689999764 688899999999
Q ss_pred HHHHHHHHh
Q 046506 297 VQEHLEALL 305 (310)
Q Consensus 297 l~~~~~~~~ 305 (310)
|++++.+..
T Consensus 511 l~~~l~~y~ 519 (527)
T PRK09275 511 IRKLLDEYY 519 (527)
T ss_pred HHHHHHHHH
Confidence 999887654
No 351
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.99 E-value=1.1e-07 Score=90.01 Aligned_cols=239 Identities=10% Similarity=0.036 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEec-cCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATI-GTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~-~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
++++++.|... +.....|++.- .....|.+.| +++|.++|++||+++++|..+.+.......+.....++ .
T Consensus 201 l~~le~~~~~~---~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv-~ 276 (466)
T PRK07030 201 FAHMEQTLAEH---HDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGI-R 276 (466)
T ss_pred HHHHHHHHHhC---CCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCC-C
Confidence 56677777632 12244555554 3444566554 88999999999999999999876644433221112233 3
Q ss_pred CCeeeeeccccccccc-ceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
.|++++ .|.+++.+ ..|.+.++++ .. +.+....+-.... ....++ ++-+....+..++++.+.+
T Consensus 277 PDiv~~--gKgl~gG~~Pi~av~~~~e-i~-~~~~~~~~~~~~~---------~h~~T~-~gnpla~aaa~a~L~~i~~- 341 (466)
T PRK07030 277 PDFLCL--SKALTGGYLPLAAVLTTDT-VY-QAFYDDYPTLRAF---------LHSHSY-TGNPLACAAALATLDIFEQ- 341 (466)
T ss_pred CCEEee--ehhccCCcccceEEEecHH-HH-HHHhccccccccc---------ccCCCC-CCCHHHHHHHHHHHHHHHh-
Confidence 799888 68877653 5677766544 32 3321110000000 000011 1112233344445554433
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCeEEecC-C-CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSDKRFEVVFP-R-HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA 259 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 259 (310)
++..++..++.++|++.|+++.....+.. . ....+.+.+..... ...+... . ......+...+.+
T Consensus 342 --~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~---------~~~~~~~-~-~~~~~~i~~~~~~ 408 (466)
T PRK07030 342 --DNVIENNRALARRMAEATAHLADHPHVAEVRQTGMILAIEMVQDKA---------SKTPYPW-Q-ERRGLKVYQHALE 408 (466)
T ss_pred --cCHHHHHHHHHHHHHHHHHHHhcCCCEEEeEeceeEEEEEeccCcc---------ccccCcc-h-hHHHHHHHHHHHH
Confidence 34567777788888888866522222221 1 22334454432100 0000000 0 1223467777888
Q ss_pred cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 260 SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 260 ~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+|.+ +.+. + .++|+.++ .-.|++||+.+++.+.+.+..+
T Consensus 409 ~Gvl-~~~~---g-~~i~~~Pp-l~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 409 RGAL-LRPL---G-SVVYFLPP-YVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred CCeE-EEec---C-CEEEEECC-ccCCHHHHHHHHHHHHHHHHHH
Confidence 8854 3332 2 47999855 6799999999999999998876
No 352
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.98 E-value=8.4e-08 Score=84.53 Aligned_cols=247 Identities=15% Similarity=0.113 Sum_probs=138.8
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccc---cCChHHHHHHHHHhCcEEEeeccccc-ccccCh----hhh
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITA---VDTLKPLCDVAKQFGIWVHVDAAYAG-SACICP----EFR 94 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~---~~pl~~I~~l~~~~g~~l~vD~a~~~-~~~~~~----~~~ 94 (310)
+|.+|++.|++.|++-..++ .|.+++..++++..|. +.+++++.++|++|++++++|+|.-+ .+++.. .++
T Consensus 166 KGd~D~~kLe~lidevG~~n-vp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYr 244 (471)
T COG3033 166 KGNFDLEKLERLIDEVGADN-VPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYR 244 (471)
T ss_pred CCccCHHHHHHHHHHhCccc-CcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccc
Confidence 34799999999998865443 4666666667777775 46689999999999999999998633 233321 121
Q ss_pred h-----hh-cCCCCCCeeeeecccccccccceEEEEEeCchhH---HhhhccCCccccccccccccccCCCCceeccCCC
Q 046506 95 H-----FI-DGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDL---VNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR 165 (310)
Q Consensus 95 ~-----~~-~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~---~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 165 (310)
+ .. +-++++|-+++|+-|=..++. .|+++.+++..+ ..+.....-+ .+.+.|+- -.||.
T Consensus 245 d~sI~~IarEm~sYaD~~~mS~KKD~lvnm-GGfl~~~D~~~fDvy~~~~~~~V~~--------eG~~tYGg---l~Grd 312 (471)
T COG3033 245 DWSIEEIAREMYSYADGCTMSAKKDGLVNM-GGFLCFKDDSFFDVYEECRTLVVVQ--------EGFPTYGG---LAGRD 312 (471)
T ss_pred cccHHHHHHHHHhhhhhheeeccccceecc-ccEEEecCccHHHHHHHHHhheEee--------ccccccCc---ccchh
Confidence 1 11 124679999999999888776 467788888532 1111111000 01111110 11222
Q ss_pred cchHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHH
Q 046506 166 FRSLKLWFVLRN-YGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEE 244 (310)
Q Consensus 166 ~~~~~~~~~l~~-~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
..++ +..|.. +..+.+ ++..+-.+||.++|.+. |++++-|....-+.+..... |...-.+|-
T Consensus 313 meal--AvGL~e~~~~~yl----~~Rv~Qv~YL~~~l~~~-GVpi~~paGGHavfvda~~~-----lphip~eqF----- 375 (471)
T COG3033 313 MEAL--AVGLREGVNFDYL----AHRVAQVQYLADGLEEA-GVPIVQPAGGHAVFVDAGKF-----LPHIPAEQF----- 375 (471)
T ss_pred HHHH--HHHHHHhcCcHHH----HHHHHHHHHHHHHHHhc-CCeeEecCCCceEEeehhhh-----cCCCChhhC-----
Confidence 2221 122211 122333 34444567788888876 89888666665554443321 000111110
Q ss_pred HHHHHHHHHHHHHHhc-CcEEEEEe------EEC-------CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 245 RINEFNRELLESINAS-GKAYMTHA------VLG-------GIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 245 ~~~~~~~~l~~~l~~~-g~~~~~~~------~~~-------~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
- ++.+.-.|... |+-.+.-. ..+ .-..+|+.+...--|.+++|.++++++.+.+.
T Consensus 376 p----aqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 376 P----AQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred c----HHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhc
Confidence 1 13343334333 33222211 111 12689999886556788999999999998765
No 353
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.98 E-value=1.3e-07 Score=89.37 Aligned_cols=225 Identities=13% Similarity=0.079 Sum_probs=123.9
Q ss_pred cEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeeeeecccccccccce
Q 046506 45 PLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDC 120 (310)
Q Consensus 45 ~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~ 120 (310)
...|++.-.....|.+.| ++++.++|++||+++++|..+.++......+.....++ ..|++++ .|.+++.+..
T Consensus 226 iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv-~PDivt~--gK~l~gG~Pi 302 (459)
T PRK06931 226 PAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGI-EPDIIVM--SKAVGGGLPL 302 (459)
T ss_pred eEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCC-CCCEEEe--cccccCCcce
Confidence 445555555555566554 88999999999999999999876654443222111233 3788887 6887765556
Q ss_pred EEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Q 046506 121 CCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERL 200 (310)
Q Consensus 121 g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~ 200 (310)
|.+..++. + +.+. +....+ ++ ++-+..+.+..++++.+..+ ...++..++.++|++.
T Consensus 303 ~av~~~~~--~-~~~~--~~~~~~--------------T~-~gnpla~aaala~L~~l~~~---~l~~~~~~~G~~l~~~ 359 (459)
T PRK06931 303 AVLGIKKE--F-DAWQ--PGGHTG--------------TF-RGNQLAMATGLTTLKILKEE---NLAQNAAERGEWLKAQ 359 (459)
T ss_pred eeeeeHHH--H-hhcc--CCCCCC--------------CC-CCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHH
Confidence 76655432 2 2221 111100 11 12222334444555544333 3556666677777777
Q ss_pred HcCC-CCeEEecCC--CceEEEEEEcCCcchhhhhhhhcc-ccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEE
Q 046506 201 VGSD-KRFEVVFPR--HFAVVCFRVSPSAVMDKLKTKYEN-SLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAI 276 (310)
Q Consensus 201 L~~~-~~~~v~~~~--~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~i 276 (310)
|+++ ....++... ...++.+.+...... ++.. ..+.+ ......+...+.++|.+. .+.. ....++
T Consensus 360 L~~l~~~~~~i~~vrG~Glm~giel~~~~~~-----~~~~~~~~~~----~~~~~~~~~~~~~~Gvl~-~~~~-~~~~~l 428 (459)
T PRK06931 360 LAELQKRYPCIGNVRGRGLMIGIEIVDERQP-----ADAMGSYPAD----GELAAAIQKACFENGLLL-ERGG-RNGNVV 428 (459)
T ss_pred HHHHHHhCCCeEeEecCceEEEEEEccCccc-----ccccccCCcc----HHHHHHHHHHHHHCCcEE-eecC-CCCCEE
Confidence 7653 122222221 233444555321000 0000 00001 123356777788888544 3221 124689
Q ss_pred EEEccCCCCCHHHHHHHHHHHHHHHHHHhhc
Q 046506 277 RFAAGATLTEERHVMVAWTVVQEHLEALLSA 307 (310)
Q Consensus 277 Ris~~~~~~t~edi~~li~~l~~~~~~~~~~ 307 (310)
|+.++ ...|++||+.+++++.+.+..+.|.
T Consensus 429 ~~~Pp-l~it~~eid~~~~~l~~~l~~~~~~ 458 (459)
T PRK06931 429 RLLPP-LLITQAECEEFIDRFEQALLAAVKA 458 (459)
T ss_pred EEECC-CCcCHHHHHHHHHHHHHHHHHHHhh
Confidence 99855 6799999999999999999876653
No 354
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=98.97 E-value=3.1e-07 Score=86.09 Aligned_cols=233 Identities=12% Similarity=0.016 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCC
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGA 103 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 103 (310)
++++++.+.... .+..+..|++.-.....|.+.| +++|.++|++||+++++|.++.+.........-...++ ..
T Consensus 183 ~~~l~~~~~~~~-~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv-~p 260 (425)
T PRK07495 183 LAALDKLFKADV-DPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEV-AA 260 (425)
T ss_pred HHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccCC-CC
Confidence 344566664311 1122445666555555675543 88999999999999999999875433322110000112 25
Q ss_pred CeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHH
Q 046506 104 DSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANL 183 (310)
Q Consensus 104 D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 183 (310)
|+ .+..|.+++....|++..+++ .. +.+. +..... ++ ++-+..+.+..++++.+..+
T Consensus 261 Di--~tlsK~l~~G~pigav~~~~~-i~-~~~~--~~~~~~--------------T~-~~~pl~~aaa~a~l~~l~~~-- 317 (425)
T PRK07495 261 DL--TTMAKGLAGGFPLAAVTGRAE-IM-DAPG--PGGLGG--------------TY-GGNPLGIAAAHAVLDVIEEE-- 317 (425)
T ss_pred CE--EeehhhhcCCccceEEEEcHH-HH-hccC--CCCcCC--------------CC-CCCHHHHHHHHHHHHHHHhc--
Confidence 65 445798876555677766433 32 3221 110000 11 11122333344566555333
Q ss_pred HHHHHHHHHHHHHHHHHHcCC----CCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh
Q 046506 184 RHFLRSHVNMAKLFERLVGSD----KRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA 259 (310)
Q Consensus 184 ~~~~~~~~~~a~~l~~~L~~~----~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 259 (310)
...++..++.++++++|+++ |.+.=+... ...+.+.+.+... . ... ......+.+.+.+
T Consensus 318 -~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-Gl~~~iel~~~~~----------~--~~~---~~~~~~~~~~~~~ 380 (425)
T PRK07495 318 -DLCERANQLGNRLKQRLASLRETVPEIADIRGP-GFMNAVEFNDADS----------G--LPS---AEFANRVRLKALE 380 (425)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecC-ceEEEEEEecCCC----------C--Ccc---HHHHHHHHHHHHH
Confidence 34555556666666666543 322111111 3344555543210 0 000 1234567777888
Q ss_pred cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 260 SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 260 ~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
+|.+. .+... ...++||.+. ...|++++|.+++.|.+.+.++.
T Consensus 381 ~Gvl~-~~~g~-~~~~~r~~Pp-l~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 381 KGLIL-LTCGV-HGNVIRFLAP-ITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred CCeEE-eecCC-CCCEEEEeCC-CccCHHHHHHHHHHHHHHHHHHh
Confidence 88543 32211 1368999955 67999999999999999987753
No 355
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.97 E-value=1.2e-07 Score=89.81 Aligned_cols=237 Identities=11% Similarity=0.039 Sum_probs=124.9
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEec-cCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATI-GTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~-~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
+++.+++.+... +.....|++.- .....|.+.| ++++.++|++||+++++|..+.+.......+.....++
T Consensus 222 ~~~~l~~~~~~~---~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv- 297 (472)
T PRK08742 222 AADALQALFEQS---PGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGV- 297 (472)
T ss_pred HHHHHHHHHHhC---CCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCC-
Confidence 356777777532 11244455543 2444566544 88999999999999999999876654443222111233
Q ss_pred CCCeeeeeccccccccc-ceEEEEEeCchhHHhhhccCC--ccccccccccccccCCCCceeccCCCcchHHHHHHHHHh
Q 046506 102 GADSFSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLSTNP--EYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNY 178 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~~~--~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 178 (310)
..|++++ .|.+++.+ ..|.++++++ .. +.+.... ...... .++ ++-+....+..++++.+
T Consensus 298 ~PDiv~~--gKgl~gG~~Plaav~~~~e-i~-~~~~~~~~~~~~~h~------------~T~-~gnpl~~Aaa~a~L~~i 360 (472)
T PRK08742 298 MPDLLCL--SKGLTGGFLPLSAVLATQQ-LY-DAFLDDSRERAFLHS------------HSY-TGNPLACAAALATLDIF 360 (472)
T ss_pred CCCEEEE--cccccCCCCCcceeeccHH-HH-HHhhccCccCccCcC------------CCC-CccHHHHHHHHHHHHHH
Confidence 3798888 68887542 4677766544 32 3221110 000000 011 11122334444555555
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC--CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHH
Q 046506 179 GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR--HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLES 256 (310)
Q Consensus 179 ~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 256 (310)
.+++ ..++..++.+++.+.+..+....++... ....+.+.+..... ...+... . ......+.+.
T Consensus 361 ~~~~---l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~---------~~~~~~~-~-~~~~~~~~~~ 426 (472)
T PRK08742 361 ADDD---VIARNQPTAARMTQLAAQIGEHPHVADVRQAGMVVAFELTRGGN---------KRTPFPP-A-ARVGLHAYRA 426 (472)
T ss_pred HHCC---HHHHHHHHHHHHHHHHHHHhcCCCeeeEeccceEEEEEeccCcc---------ccccCCc-h-hHHHHHHHHH
Confidence 4433 3445555555555554433222222221 12334454432100 0000000 0 1223456677
Q ss_pred HHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 257 INASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 257 l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+.++|.+. .+. + .+|||.+. ...|++||+.+++.|.+.+.++
T Consensus 427 ~~~~Gll~-~~~---g-~vi~~~Pp-L~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 427 ALARGVVL-RPL---G-DVLYWMPP-YCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred HHHCCeEE-Eec---C-CEEEEECC-CCCCHHHHHHHHHHHHHHHHHH
Confidence 77888543 332 2 58999955 6799999999999999998765
No 356
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=98.97 E-value=7.9e-08 Score=90.08 Aligned_cols=231 Identities=10% Similarity=0.013 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccC-C---hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCC
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVD-T---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGA 103 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~-p---l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 103 (310)
++.+++.+.+.. ....+..|+++-..++.|... | +++|.++|++||+++++|..+.+.........-...++ ..
T Consensus 183 ~~~l~~~~~~~~-~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~-~p 260 (421)
T PRK09792 183 LDAIERLFKSDI-EAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYAD-KP 260 (421)
T ss_pred HHHHHHHHHhcc-CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCC-CC
Confidence 477787776421 011245666666667778654 6 99999999999999999999876544332111001112 36
Q ss_pred CeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHH
Q 046506 104 DSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANL 183 (310)
Q Consensus 104 D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 183 (310)
|+ .+..|.+++....|.++.+++ .. +.+.. ..... ++ .+-+....+..++++.+..+
T Consensus 261 Di--~t~gK~l~~G~pigav~~~~~-i~-~~~~~--~~~~~--------------T~-~gnpl~~aaa~a~l~~l~~~-- 317 (421)
T PRK09792 261 DL--MTMAKSLAGGMPLSGVVGNAN-IM-DAPAP--GGLGG--------------TY-AGNPLAVAAAHAVLNIIDKE-- 317 (421)
T ss_pred cE--EEeehhhcCCCceEEEEEcHH-HH-hccCC--CCcCC--------------CC-CCCHHHHHHHHHHHHHHHhh--
Confidence 75 455899986566777765433 32 22210 00000 11 11112233334555555333
Q ss_pred HHHHHHHHHHHHHHHHHHcCC-CCeEEecC-CC-ceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhc
Q 046506 184 RHFLRSHVNMAKLFERLVGSD-KRFEVVFP-RH-FAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINAS 260 (310)
Q Consensus 184 ~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~-~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 260 (310)
+..++..++.+++.+.|.++ ..+..+.. .. ...+.+.+.+... ..+ . ......+...+.++
T Consensus 318 -~~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~~~-------------~~~-~-~~~~~~l~~~~~~~ 381 (421)
T PRK09792 318 -SLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQT-------------GEP-S-AAIAQKIQQRALAQ 381 (421)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHhCCCcceecccceEEEEEecCCcc-------------CCc-c-hHHHHHHHHHHHHC
Confidence 45556666777776666543 11211222 22 3455555543210 000 0 12345677788888
Q ss_pred CcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 261 GKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 261 g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
|.+. .+. -....+||+.++ .-.+++||+.++++|.+.+.
T Consensus 382 Gv~i-~~~-g~~~~~irl~P~-l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 382 GLLL-LTC-GAYGNVIRFLYP-LTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred CcEE-eec-CCCCCEEEEeCC-CcCCHHHHHHHHHHHHHHHh
Confidence 8654 221 012478999855 45899999999999988763
No 357
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.97 E-value=6.3e-08 Score=90.64 Aligned_cols=210 Identities=10% Similarity=0.005 Sum_probs=114.7
Q ss_pred cEEEEEecc-CCcccccC----ChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeeeeecccccccc-c
Q 046506 45 PLFLCATIG-TTAITAVD----TLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-L 118 (310)
Q Consensus 45 ~~~v~~~~~-~~~~G~~~----pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~ 118 (310)
...|++.-. ....|.+. .+++|.++|++||+++++|.+|.+.......+.....++ ..|++++ .|.+++. .
T Consensus 201 iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDi~t~--gK~l~gG~~ 277 (422)
T PRK05630 201 VAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGV-TPDIMCV--GKALTGGFM 277 (422)
T ss_pred eEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCC-CCCeeee--echhhcCcc
Confidence 334554432 33445543 389999999999999999999865543332211111233 3788855 7988553 2
Q ss_pred ceEEEEEeCchhHHhhhccC--CccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 046506 119 DCCCLWVKDPSDLVNSLSTN--PEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKL 196 (310)
Q Consensus 119 g~g~l~v~~~~~~~~~~~~~--~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~ 196 (310)
..|++.++++ .. +.+... ...+... .++ ++-+..+.+..++++.+..+ ...++..++.++
T Consensus 278 p~~av~~~~~-i~-~~~~~~~~~~~~~h~------------~T~-~g~Pla~aaa~aaL~~l~~~---~~~~~~~~~g~~ 339 (422)
T PRK05630 278 SFAATLCTDK-VA-QLISTPNGGGALMHG------------PTF-MANPLACAVAHASLEIIETG---MWRKQVKRIEAE 339 (422)
T ss_pred ccceeeccHH-HH-HHHhccCCCCccccC------------CCC-cCCHHHHHHHHHHHHHHHhC---cHHHHHHHHHHH
Confidence 3455555443 22 333110 0000000 011 12222334445556555333 345677778888
Q ss_pred HHHHHcCCCCeEEecCC--CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEe
Q 046506 197 FERLVGSDKRFEVVFPR--HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIY 274 (310)
Q Consensus 197 l~~~L~~~~~~~v~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~ 274 (310)
|++.|+.+.....+... ...++.+.+.... . ...+.+.+.++|.+ +.+. + .
T Consensus 340 l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~~~--------------------~--~~~~~~~~~~~Gl~-~~~~---g-~ 392 (422)
T PRK05630 340 LIAGLSPLAHLPGVADVRVLGAIGVVEMEQPV--------------------D--MEEATQAAVDHGVW-LRPF---G-R 392 (422)
T ss_pred HHHHHHHhhcCCCeeeeeccccEEEEEECCcc--------------------c--HHHHHHHHHHCCeE-EEec---C-C
Confidence 88877653222112111 2445556554320 0 13566677788754 4332 2 5
Q ss_pred EEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 275 AIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 275 ~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
++|+.+. ...|++|||.++++|++.+..
T Consensus 393 ~l~~~Pp-L~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 393 LVYVMPP-YITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred EEEEECC-ccCCHHHHHHHHHHHHHHHhc
Confidence 8999955 679999999999999987753
No 358
>PRK06917 hypothetical protein; Provisional
Probab=98.96 E-value=2.2e-07 Score=87.69 Aligned_cols=243 Identities=12% Similarity=0.030 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCC-cccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTT-AITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~-~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
++.+++.+..... .....|++.-... ..|.+.| +++|.++|++||+++++|.++.++......+.....++ .
T Consensus 185 ~~~le~~i~~~~~--~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv-~ 261 (447)
T PRK06917 185 ATELETAIERIGA--EHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGV-E 261 (447)
T ss_pred HHHHHHHHHhcCC--CceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCC-C
Confidence 4667777764211 1234455544333 3345544 88999999999999999999875533333221111233 3
Q ss_pred CCeeeeeccccccccc-ceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
.|++++ .|.+++.+ ..|.+..+++ .. +.+......+...+ + ..+-+....+..++++.+..
T Consensus 262 PDi~~~--gK~l~~G~~Pi~a~~~~~~-i~-~~~~~~~~~~~~~~------------T-~~gnpl~~aaa~a~l~~l~~- 323 (447)
T PRK06917 262 PDIMTL--GKGLGAGYTPIAATVVSDR-VM-EPILRGSRSIMSGH------------T-LSANPLSAATALAVLEYMEK- 323 (447)
T ss_pred CCEEEe--eehhccCCcceEEEEEcHH-HH-HHHhccCccccccc------------C-CCCCHHHHHHHHHHHHHHHH-
Confidence 788666 79887643 4666666543 32 33321111111100 0 01112233444455554432
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCC-CeEEecCC--CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSDK-RFEVVFPR--HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESIN 258 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~~-~~~v~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 258 (310)
++..++..++.++|++.|+++. ...++... ...++.+.+...... + .+.. ........+...+.
T Consensus 324 --~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~---~------~~~~--~~~~~~~~~~~~~~ 390 (447)
T PRK06917 324 --HNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKT---K------QPFS--KSQAVASELISVAA 390 (447)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCc---C------CCCc--chhHHHHHHHHHHH
Confidence 2456677777777777776541 22222221 233444544321000 0 0000 00234456777888
Q ss_pred hcCcEEEEEeEE----CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 259 ASGKAYMTHAVL----GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 259 ~~g~~~~~~~~~----~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
++|.+. .+... ....++|+++. ...|++|||.+++++.+.+.++.+
T Consensus 391 ~~Gvl~-~~~~~~~~g~~~~~i~l~Pp-l~it~~eid~~~~~l~~~l~~~~~ 440 (447)
T PRK06917 391 KNGLLL-YPAVAGQDGKEGDAVIIAPP-MTITYSELDELLSIFAKSVEEMMQ 440 (447)
T ss_pred hCCcEE-EecccccCCCCCCEEEEECC-CcCCHHHHHHHHHHHHHHHHHHHH
Confidence 888654 32211 12468999955 569999999999999999977644
No 359
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=98.94 E-value=9.7e-08 Score=87.15 Aligned_cols=239 Identities=11% Similarity=0.084 Sum_probs=131.5
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++|++++.+... ....|++.-.-...|.+.| +++|.++|++||++|+.|....++-...-.... ..++ .
T Consensus 186 D~~al~~~~~~~g~---~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~-~~gi-~ 260 (432)
T COG0001 186 DLEALEEAFEEYGD---DIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQG-YYGV-E 260 (432)
T ss_pred CHHHHHHHHHHcCC---cEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCccccc-ccCc-C
Confidence 78999999988632 2445555555566688877 778999999999999999988655443211111 1222 2
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCH-H
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGV-A 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~ 181 (310)
.|..++ .|.+++...+|.+--+ ++..+...+..+-|..++-. +-+....+..++++.+.. +
T Consensus 261 PDlttl--GKiIGGGlP~ga~gGr-~eiM~~~~p~g~vyqaGT~s---------------gnplamaAG~atl~~l~~~~ 322 (432)
T COG0001 261 PDLTTL--GKIIGGGLPIGAFGGR-AEIMEQLAPLGPVYQAGTLS---------------GNPLAMAAGLATLEELMTEE 322 (432)
T ss_pred cchhhh--hhhhcCCcceeeeccH-HHHHhhhCCCCCccccCCCC---------------CcHHHHHHHHHHHHHHHhcc
Confidence 677665 6888887777877544 33433222333333222110 001122333445554433 2
Q ss_pred H-HHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhc
Q 046506 182 N-LRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINAS 260 (310)
Q Consensus 182 ~-~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 260 (310)
+ |+.+.+.-.++.+-+.+.+.+. ++++......+.+.+.+.+..+.. +.+. ...+.+.+ ..+...|.++
T Consensus 323 ~~y~~l~~~~~~L~~gl~~~~~~~-g~~~~v~~~gsm~~i~F~~~~~~n-----~~da---~~sd~~~~-~~~~~~~l~~ 392 (432)
T COG0001 323 GVYERLDALGERLAEGLRAAAERH-GIPLTVNRVGSMFGIFFTEEGVRN-----YADA---KRSDVERF-AKFFHHLLNR 392 (432)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEeeecceEEEEecCCCCCC-----HHHH---HhhchHHH-HHHHHHHHhC
Confidence 2 4444444444444444444443 665543444556666666532110 0000 01122323 3344477788
Q ss_pred CcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 261 GKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 261 g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
|. ++.|..+ +.. +.+.-.|++|||+.++++.+....+.
T Consensus 393 GV-~l~ps~~--ea~----flS~ahte~di~~~~~a~~~~~~~~~ 430 (432)
T COG0001 393 GV-YLAPSQF--EAG----FLSTAHTEEDIDRTLEAADEAFKELA 430 (432)
T ss_pred Cc-ccCCccc--cce----eeecccCHHHHHHHHHHHHHHHHHhh
Confidence 74 5554421 111 23345789999999999998887764
No 360
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=98.93 E-value=1.5e-08 Score=91.05 Aligned_cols=192 Identities=13% Similarity=0.080 Sum_probs=120.0
Q ss_pred eecCCCCCCEEEEecC------CCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhC
Q 046506 4 QIVGIDVKNFRAIKTT------KSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFG 74 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~------~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g 74 (310)
.+.|-. .++|+.. -.+.+.+|++.||.+|++.|+ +|++..++|++|.+.+ |++|+++|++||
T Consensus 135 ~maG~t---pv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk------~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~ 205 (420)
T KOG0257|consen 135 VMAGGT---PVFVPLKPKEGNVSSSDWTLDPEELESKITEKTK------AIILNTPHNPTGKVFSREELERIAELCKKHG 205 (420)
T ss_pred hhcCCc---ceeeccccccccccCccccCChHHHHhhccCCcc------EEEEeCCCCCcCcccCHHHHHHHHHHHHHCC
Confidence 455655 7778877 334689999999999999865 8999999999999755 999999999999
Q ss_pred cEEEeecccccccccChhhhhhh--cCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCcccccccccccc
Q 046506 75 IWVHVDAAYAGSACICPEFRHFI--DGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQ 151 (310)
Q Consensus 75 ~~l~vD~a~~~~~~~~~~~~~~~--~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~ 151 (310)
++++.|.++........++-... .++-..-.-+.|+.|+++.. -=.|.++. +++++..........
T Consensus 206 ~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~ig-p~~L~~~~~~vh~~~---------- 274 (420)
T KOG0257|consen 206 LLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIG-PKHLYSALFPVHQNF---------- 274 (420)
T ss_pred EEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeec-hHHhhhhHHHHhhcc----------
Confidence 99999999854443332221110 11111233457888887752 23456655 555544333221111
Q ss_pred ccCCCCceeccCCCc-chH--HHHHHH--HHhC-HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEc
Q 046506 152 VVDYKDWQITLSRRF-RSL--KLWFVL--RNYG-VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVS 223 (310)
Q Consensus 152 ~~~~~~~~~~~~~~~-~~~--~~~~~l--~~~~-~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~ 223 (310)
.+.+..++ .+. +....+ ..-+ ......+.+...++.+.+.+.|.++ |+++..+.....+...+.
T Consensus 275 -------~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~v~~p~gayyl~adfs 344 (420)
T KOG0257|consen 275 -------VFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLKVTGPEGAYYLWADFS 344 (420)
T ss_pred -------ccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCceEEEEecc
Confidence 11111121 111 111111 1111 1334457788889999999999998 999987766666666666
No 361
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.92 E-value=7.1e-08 Score=90.81 Aligned_cols=244 Identities=16% Similarity=0.168 Sum_probs=146.7
Q ss_pred EEEEecCCCC----CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccc
Q 046506 13 FRAIKTTKSS----SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSAC 88 (310)
Q Consensus 13 v~~v~~~~~~----~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~ 88 (310)
-+++.+..|. -+.|+.+.+++.+.+..... + .++...+|..|++-++++|.++++++++|+.+|.+|++...
T Consensus 134 Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~---k-~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~ 209 (557)
T COG1982 134 PVYLEPSRNPLYGIIGGIPLETFKEALLAHPDAE---K-LAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFD 209 (557)
T ss_pred eEEecCCCCccccccCCCCHHHHHHHHHhChhhh---e-eEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCccccc
Confidence 5555554432 13689999999998875421 2 44456677889999999999999999999999999988776
Q ss_pred cChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCc-----hhHHhhh----ccCCccccccccccccccCCCCce
Q 046506 89 ICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDP-----SDLVNSL----STNPEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 89 ~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~-----~~~~~~~----~~~~~y~~~~~~~~~~~~~~~~~~ 159 (310)
..+.... ......+|+++-|.||.+++...++.+++++. +.+.+++ +.+|.|.-.
T Consensus 210 ~~~~l~~-~~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~--------------- 273 (557)
T COG1982 210 FSPMLPE-SALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLM--------------- 273 (557)
T ss_pred ccccCcc-hhhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHHH---------------
Confidence 6544332 11114699999999999999999999999972 2222322 222222111
Q ss_pred eccCCCcchHHHHHH-HHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCc--eEE----------EEEEcCCc
Q 046506 160 ITLSRRFRSLKLWFV-LRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHF--AVV----------CFRVSPSA 226 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~--~~v----------~~~~~~~~ 226 (310)
.++.++.. ....|..-+.+.++...+.++++++...++++|.++.++.. ..- .+.+.|..
T Consensus 274 -------ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~K 346 (557)
T COG1982 274 -------ASLDVARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTK 346 (557)
T ss_pred -------HHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccE
Confidence 11222111 11124444555678888888999999888888888865421 000 11222211
Q ss_pred chhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHH
Q 046506 227 VMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQ 298 (310)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~ 298 (310)
++.. ++ ...--...+.+.|.++|++..-... ....+=|++. ......+|+.|++..+
T Consensus 347 lti~--------tp----~~Gipg~~v~~~L~e~gii~e~~~d--~~~lll~~~~-~gk~~~lv~~L~~f~r 403 (557)
T COG1982 347 LTIT--------TP----EFGIPGAIVAKYLREHGIIPEETGD--YSNLLLFSPG-IGKWQTLVDRLLEFKR 403 (557)
T ss_pred EEEe--------cC----CCCCcHHHHHHHHHHcCCeeeecCC--ceeeEEeeec-cchHHHHHHHHHHHHH
Confidence 1100 00 0011124567778788865443221 2333444423 2456677888887766
No 362
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.91 E-value=2.6e-07 Score=87.42 Aligned_cols=240 Identities=10% Similarity=0.020 Sum_probs=128.3
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEec-cCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATI-GTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~-~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
+++.+++.|... +.....|++.- .....|.+.| ++++.++|++||+++++|..+.+.......+.-...++
T Consensus 209 ~~~~l~~~l~~~---~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv- 284 (460)
T PRK06916 209 HLEELEELLKEK---HEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENV- 284 (460)
T ss_pred HHHHHHHHHHhC---CCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCC-
Confidence 356677777532 11244555544 3455566543 88999999999999999999866544333222111233
Q ss_pred CCCeeeeeccccccccc-ceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCH
Q 046506 102 GADSFSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGV 180 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 180 (310)
..|++++ .|.+++.+ ..|.+..+++ .. +.+.. .+..... . ....++ ++.+....+..++++.+..
T Consensus 285 ~PDiv~~--gK~l~gG~~Pi~av~~~~e-i~-~~~~~--~~~~~~~-----~--~~~~T~-~gnpl~~aaa~a~l~~l~~ 350 (460)
T PRK06916 285 TPDIMTA--GKGLTGGYLPIAITVTTDE-IY-NAFYG--DYEEQKT-----F--FHGHSY-TGNPLGCAVALANLELYEK 350 (460)
T ss_pred CCCeeee--ehhhhcCccccceeeecHH-HH-HHhhc--cccccCc-----c--ccCCCC-CCCHHHHHHHHHHHHHHHh
Confidence 3788766 68777542 4677766544 32 32211 1100000 0 000011 1112223334444544433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC-CC-ceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHH
Q 046506 181 ANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP-RH-FAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESIN 258 (310)
Q Consensus 181 ~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 258 (310)
+...++..++.+++++.|+++.....+.. .. ..++.+.+..... ...+... . ......+...+.
T Consensus 351 ---~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel~~~~~---------~~~~~~~-~-~~~~~~i~~~~~ 416 (460)
T PRK06916 351 ---TNLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELVKNKE---------TKEPFEW-T-ERVGVQVCKRSR 416 (460)
T ss_pred ---ccHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEeecccc---------cccCCCc-h-hhHHHHHHHHHH
Confidence 34567777888888888876532222221 11 2233444432100 0000000 0 122346777788
Q ss_pred hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 259 ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 259 ~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
++|.+. .+. ..++|+.++ ...|++||+.+++++.+.+.++
T Consensus 417 ~~Gvl~-~~~----g~~l~~~Pp-l~it~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 417 ELGMLT-RPL----GNTIVFMPP-LASTIDELDEMLRILYKAISDV 456 (460)
T ss_pred HCCeEE-Eec----CCEEEEeCC-cccCHHHHHHHHHHHHHHHHhh
Confidence 888543 332 247999844 6799999999999999988765
No 363
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.89 E-value=1.7e-07 Score=88.03 Aligned_cols=224 Identities=10% Similarity=-0.008 Sum_probs=116.4
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCee
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSF 106 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~ 106 (310)
|+++|+++|.+.. .....|++.....+.+...++++|.++|++||+++++|.+|.+......... ...++ ..|.+
T Consensus 173 d~~~l~~~l~~~~---~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~-~~~gv-~PDi~ 247 (431)
T PRK06209 173 DIASLEALFEDHP---GRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQ-KLYGI-VPDLS 247 (431)
T ss_pred CHHHHHHHHHhCC---CCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhh-HHhCC-Cccee
Confidence 7899999996531 1244566655544444445599999999999999999999854422110001 01123 36774
Q ss_pred eeecccccccccceEEEEEeCchhHHhhhcc---C-C-ccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 107 SLNAHKWFFTTLDCCCLWVKDPSDLVNSLST---N-P-EYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 107 ~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~---~-~-~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
+ ..|.+++.+..|.+..+++ .. +.+.. + + .++... + -++-+..+.+..++++.+..+
T Consensus 248 t--~gK~lggG~p~~av~~~~~-i~-~~~~~~~~~~~~~~~~~~-------------T-~~~np~~~aaa~a~l~~i~~~ 309 (431)
T PRK06209 248 C--FGKALGNGFAVSALAGKRE-YM-ELGGLEHTDRERVFLLST-------------T-HGAETHALAAAIATMAIYRDE 309 (431)
T ss_pred e--ehhhhcCCcccEEEEEHHH-HH-hhhcccccCCCCceeecc-------------C-CCCCHHHHHHHHHHHHHHhcc
Confidence 4 4798886444566655433 32 22100 0 0 111000 0 001112334455566655433
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC----CCCeEE-ecCCCceEE-EEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGS----DKRFEV-VFPRHFAVV-CFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLE 255 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~----~~~~~v-~~~~~~~~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 255 (310)
...++..++.+++++.|++ . ++.. +......+. .+...... ..+ .......+.+
T Consensus 310 ---~~~~~~~~~g~~l~~~L~~~~~~~-~~~~~vr~~G~~~~~~~~~~~~~--------------~~~--~~~~~~~~~~ 369 (431)
T PRK06209 310 ---DVIERLHEQGAKLAAGVNEAAAEH-GLQDHVRVSGRPCCLTYSTLDGN--------------GQP--SQAFRTLFLQ 369 (431)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeecceEEEEEecCCcc--------------cCC--cHHHHHHHHH
Confidence 3455556666666666643 3 2221 111111111 11111110 000 0223345667
Q ss_pred HHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 256 SINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 256 ~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
.+.+.|.+. . .++++ ...|++||+++++++.+.+..++
T Consensus 370 ~l~~~Gi~~-p--------~l~is---~~ht~~dId~~l~~l~~~l~~~~ 407 (431)
T PRK06209 370 ETIRRGVLM-P--------SLVVS---YAHGDADIERTIDAVHGALGVYR 407 (431)
T ss_pred HHHHCCccc-c--------ccccc---ccCCHHHHHHHHHHHHHHHHHHH
Confidence 787888543 2 24444 35789999999999999887764
No 364
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=98.88 E-value=2.1e-07 Score=80.18 Aligned_cols=227 Identities=15% Similarity=0.180 Sum_probs=126.7
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCccccc---CChHHHHHHHHHhCcEEEeecccccccc--cChhhhhhh
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAV---DTLKPLCDVAKQFGIWVHVDAAYAGSAC--ICPEFRHFI 97 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~---~pl~~I~~l~~~~g~~l~vD~a~~~~~~--~~~~~~~~~ 97 (310)
+|++|+++|+-. +. ...||++-++|.+|.+ +++.+|..+|++||++|++|.|+|..+- .+.......
T Consensus 166 KY~vDF~~l~i~--e~------~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w 237 (417)
T COG3977 166 KYHVDFEHLHIG--ES------TGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLW 237 (417)
T ss_pred eeccCHHHcccc--cc------cceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccccC
Confidence 467788876532 33 3389999999999987 4588899999999999999999976531 111111111
Q ss_pred cCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHH----
Q 046506 98 DGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWF---- 173 (310)
Q Consensus 98 ~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 173 (310)
. .=-..++|..|.+....-||+++ .++..+ +.++....-+ ++..+|-..+++.-+
T Consensus 238 ~---~NiilC~SLSK~GLPG~R~GIiI-ane~vi-qaitnmn~ii----------------sLap~~~G~Aia~~mie~g 296 (417)
T COG3977 238 N---ENIILCMSLSKLGLPGSRCGIII-ANEKVI-QAITNMNGII----------------SLAPGRMGPAIAAEMIESG 296 (417)
T ss_pred C---CCEEEEeehhhcCCCCcceeEEE-ccHHHH-HHHHhcccee----------------eecCCCccHHHHHHHhhcc
Confidence 1 12357899999755445566665 455443 4432211111 111111111221111
Q ss_pred HHHHhCHHHHHHHHHHHHHH-HHHHHHHHcCCCCeEEecCCCceEE-EEEEcCCcchhhhhhhhccccchhHHHHHHHHH
Q 046506 174 VLRNYGVANLRHFLRSHVNM-AKLFERLVGSDKRFEVVFPRHFAVV-CFRVSPSAVMDKLKTKYENSLLSEEERINEFNR 251 (310)
Q Consensus 174 ~l~~~~~~~~~~~~~~~~~~-a~~l~~~L~~~~~~~v~~~~~~~~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (310)
.+..+.++-+...+++..+. ...++..|-+. .+.+ ..|+..|+ ..|+....++ ..
T Consensus 297 dl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~-~~~i-HkpEGAIFlWLWf~dLPIt---------------------t~ 353 (417)
T COG3977 297 DLLRLSEQVIRPFYRNRVQTTIAILRRYLPEY-RCLI-HKPEGAIFLWLWFKDLPIT---------------------TE 353 (417)
T ss_pred hHHHHHHHhhhHHHHHHHHHHHHHHHHhcCcc-ceee-ecCCcceeehhhhccCCCC---------------------HH
Confidence 11112223333333322222 22333344332 2233 35555544 5666653221 15
Q ss_pred HHHHHHHhcCcEEEEEeEE---------CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 252 ELLESINASGKAYMTHAVL---------GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 252 ~l~~~l~~~g~~~~~~~~~---------~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+++++|.+.|.+.+++... ....++|++.. -+++.|+.-++.|.+-.++.
T Consensus 354 ~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~---~~~~~ie~Gva~lae~ve~~ 412 (417)
T COG3977 354 ELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYV---PEPEKIEKGVAILAEEVERA 412 (417)
T ss_pred HHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEecC---CCHHHHHHHHHHHHHHHHHH
Confidence 7899999999877765322 12569998844 47888999999888877664
No 365
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=98.88 E-value=1.4e-08 Score=92.53 Aligned_cols=280 Identities=19% Similarity=0.214 Sum_probs=177.4
Q ss_pred cceecCCCCCCEEEEecCCCC--CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhC-cEEE
Q 046506 2 AAQIVGIDVKNFRAIKTTKSS--SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFG-IWVH 78 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~--~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g-~~l~ 78 (310)
+|+.+|+.-..+..++-...+ .++||.-.+++.|+++...+.+|.+++...+.+..|..+.|-+|.++|++|+ .|||
T Consensus 248 aarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~kildi~eahakfWLH 327 (838)
T KOG0630|consen 248 AAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMILKILDICEAHAKFWLH 327 (838)
T ss_pred HHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHHHHHHHHHHhhheeEe
Confidence 467788875555555443321 2489999999999999888889999999999999999999999999999998 9999
Q ss_pred eecccccccccChhhhhhhcC-CCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 79 VDAAYAGSACICPEFRHFIDG-VEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 79 vD~a~~~~~~~~~~~~~~~~~-~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
.-|- +..++.+.+....... .+..|+++.+..-|++.|.---+++-|+-+. |-.... + ..
T Consensus 328 asGh-aiAALt~aepnnil~HV~eqldSMal~ialWLGiPSaPiV~LHRPleg----------~aaSaf-e--sd----- 388 (838)
T KOG0630|consen 328 ASGH-AIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSAPIVLLHRPLEG----------SAASAF-E--SD----- 388 (838)
T ss_pred eccc-hhhheeecCcccchhHHHHHHhhccchhHHHhCCCCCceEEeeccccc----------ccchhc-c--cC-----
Confidence 9873 3333333321111101 1247999999999999996444443222211 111000 0 00
Q ss_pred ceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC------------------------
Q 046506 158 WQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR------------------------ 213 (310)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~------------------------ 213 (310)
....++..++++|.+++++|...+..+++....+++-+.+.+.+.+++++++..
T Consensus 389 --pi~rekLdaLp~Wta~q~LggKaIadmienAFll~kilfe~aSa~~eiemig~dn~aelaarl~dn~~sPfdvqalfd 466 (838)
T KOG0630|consen 389 --PILREKLDALPLWTALQALGGKAIADMIENAFLLCKILFEGASACEEIEMIGHDNGAELAARLSDNIFSPFDVQALFD 466 (838)
T ss_pred --hHHHHhhccchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhcCCceeEeccCCHHHHHHHHhhccCCcchHhhhhc
Confidence 012345689999999999999999999999999999999999999999998521
Q ss_pred -CceEEEEEEcCCcchhhhhhhhcc---c-------------cchh-HHHHHHHHHHHHHHHHhcCc-EEEEEeEEC--C
Q 046506 214 -HFAVVCFRVSPSAVMDKLKTKYEN---S-------------LLSE-EERINEFNRELLESINASGK-AYMTHAVLG--G 272 (310)
Q Consensus 214 -~~~~v~~~~~~~~~~~~~~~~~~~---~-------------~~~~-~~~~~~~~~~l~~~l~~~g~-~~~~~~~~~--~ 272 (310)
..++|.+.+.+... .++....+- | ..++ .+..+.+|.++.+.|..+.- +-....-.. .
T Consensus 467 aaaPtVai~~~~~ts-Ik~a~q~hkaaaaaaddedA~aiaeke~~deaeY~D~LNaWL~d~Llpd~~~f~fdtIE~~gn~ 545 (838)
T KOG0630|consen 467 AAAPTVAIFFDGSTS-IKLAGQGHKAAAAAADDEDAEAIAEKEKIDEAEYFDRLNAWLGDGLLPDCLNFDFDTIEHGGNH 545 (838)
T ss_pred ccCCeEEEEecCcee-eeccccccHHHHhhccccchhhcchhhhcchHHHHHHHHHHHhcccccCCCCCCceeeecCCcc
Confidence 12445554443211 111111110 0 1112 23456667777766554431 111111112 2
Q ss_pred EeEEEEEccCC-----CCCHHHHHHHHHHHHHHHHH
Q 046506 273 IYAIRFAAGAT-----LTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 273 ~~~iRis~~~~-----~~t~edi~~li~~l~~~~~~ 303 (310)
+.++|+|..-- -...+++++|...|.....-
T Consensus 546 GiafRfCPLEhgaae~pphidhlerFaqkLea~m~I 581 (838)
T KOG0630|consen 546 GIAFRFCPLEHGAAEQPPHIDHLERFAQKLEAHMDI 581 (838)
T ss_pred ceeEEecccccccccCCCchHHHHHHHHHHHHHHHH
Confidence 57899985421 13457888888887766543
No 366
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.88 E-value=1.1e-07 Score=85.66 Aligned_cols=225 Identities=18% Similarity=0.150 Sum_probs=134.7
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCccc-ccCChHHHHHHHHHhCcEEEeeccc-ccccccChhhhhhhcCCCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAIT-AVDTLKPLCDVAKQFGIWVHVDAAY-AGSACICPEFRHFIDGVEGAD 104 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G-~~~pl~~I~~l~~~~g~~l~vD~a~-~~~~~~~~~~~~~~~~~~~~D 104 (310)
|.++|+++ ... . .+.+++..+++ .| .+.++++|.+.+|++|++++|=.=- +.+.+..|. --++|
T Consensus 199 d~~~l~~~-~~~-~----~~gv~vQyP~~-~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pPG-------e~GAD 264 (450)
T COG0403 199 DLDDLESA-DDG-D----VFGVLVQYPNT-FGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPPG-------EFGAD 264 (450)
T ss_pred hhhhhhhc-ccc-C----eEEEEEecCCC-CCccchhHHHHHHHHhhcCCEEEEEechhHhhccCCcc-------ccCCc
Confidence 56778887 321 1 35677776665 56 6777999999999999987764321 122222221 12699
Q ss_pred eeeeecccccccccc-----eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccC----CCcc--------
Q 046506 105 SFSLNAHKWFFTTLD-----CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLS----RRFR-------- 167 (310)
Q Consensus 105 ~~~~~~hK~l~~p~g-----~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~----~~~~-------- 167 (310)
+++.+++.+ |.|.| +|+|-++++. .+ ..|+.+-+.+.+..+-+-++. .+|.- ||--
T Consensus 265 IvvG~~Qrf-GvPmgfGGPhag~fA~~~~~--~R---~mPGRlVG~S~D~~G~~A~rL-aLQTREQHIRReKATSNICTn 337 (450)
T COG0403 265 IVVGSAQRF-GVPMGFGGPHAGYFAVKDEF--KR---QMPGRLVGVSVDAAGKRAFRL-ALQTREQHIRREKATSNICTN 337 (450)
T ss_pred eEEecCccc-CCCcCCCCcceeeeeEhHhH--hh---cCCCceeeeeecCCCCchhhh-hHHHHHHHHhhhccchhhhHH
Confidence 999999884 44533 5567666552 22 335555555433222222211 11111 2210
Q ss_pred ----hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCC-CeEEecCCCceEEEEEEcCCcchhhhhhhhccccchh
Q 046506 168 ----SLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDK-RFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSE 242 (310)
Q Consensus 168 ----~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~-~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 242 (310)
++.....+-.+|.+|+.++.++.++++.+++++|+++. |++++...-++.+.+++..
T Consensus 338 QaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~fFdt~~v~~~~------------------ 399 (450)
T COG0403 338 QALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDHFFDTFTVRVPE------------------ 399 (450)
T ss_pred HHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccccceeeEEEecch------------------
Confidence 11112223357999999999999999999999999763 6888866667777777653
Q ss_pred HHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 243 EERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 243 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
..+..+.++....|. -+... ....+=+++.- -+|++||+.|++++...
T Consensus 400 -----~~~~~l~~~~~~~G~-~L~~~---~~~~~~ia~tE-t~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 400 -----EVAEALLAAAIAGGI-NLRRV---DADTVLIALTE-TTTKEDIDALVAAFGGV 447 (450)
T ss_pred -----hHHHHHHHHHHhcCC-ceeee---cCCceEEEeec-ccCHHHHHHHHHHHhhh
Confidence 112334443333342 22111 11255677664 48899999999998764
No 367
>PRK07046 aminotransferase; Validated
Probab=98.87 E-value=3.4e-07 Score=86.40 Aligned_cols=236 Identities=13% Similarity=0.032 Sum_probs=124.0
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|++++++.+... ....|++.-.....|.+.| ++++.++|++||+++++|..+....-.... .. ..++ .
T Consensus 206 d~~~l~~~l~~~-----~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~-~~-~~gv-~ 277 (453)
T PRK07046 206 DLAALEAALADG-----DVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGY-TR-AHGL-E 277 (453)
T ss_pred CHHHHHHHhCCC-----CeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcch-hH-HhCC-C
Confidence 689999888421 2445666655566677766 899999999999999999998511001111 11 1133 3
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhcc-CCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLST-NPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
.|.+++ .|.+++.+.+|.+..+++ .. +.+.. ......... ....++. +-+....+..++++.+..
T Consensus 278 PDi~t~--gK~lggG~Pi~av~g~~~-i~-~~~~~~~~~~~~~~~--------~~~~T~~-gnpl~~aa~~a~L~~l~~- 343 (453)
T PRK07046 278 PDFLVV--GKPIAGGVPCAVYGFSAE-LA-ERAQAAKASAPPGHS--------GIGTTLS-ANALAMAAMRATLAEVMT- 343 (453)
T ss_pred ccceee--hhhhcCCCcceeeeehHH-HH-HHHhhccccCCCCCc--------eeCCCCc-ccHHHHHHHHHHHHHHhc-
Confidence 788875 798887666787776544 32 32210 000000000 0000001 111223344445554432
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC---CCeEE-ecCCCceEEEEEEcCCcchhhhhhhhccccchhHHH--HHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSD---KRFEV-VFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEER--INEFNRELLE 255 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~---~~~~v-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~ 255 (310)
++..++..++.++|+++|.++ -++.. +... ...+.+.+.+.... ...+... -......+..
T Consensus 344 --~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~-G~~~~i~~~~~~~~----------~~~~~~~~~~~~~~~~~~~ 410 (453)
T PRK07046 344 --EAAYAHMLALAARLAAGLRAVIARHGLPWHVTRV-GARVEFQFAPTPPR----------NGAEAAAALDPELEAALHL 410 (453)
T ss_pred --ccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEe-CcEEEEEEeCCCCC----------CHHHHhcccCHHHHHHHHH
Confidence 234556666666776666542 12221 1111 22344444321100 0000000 0123456677
Q ss_pred HHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 256 SINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 256 ~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
.+.++|.++ .+. ...+|++. -.|++|||.+++++.+.+..+.
T Consensus 411 ~~~~~Gv~~-~~~----~~~~~~~p---~~t~~did~~~~~~~~~l~~~~ 452 (453)
T PRK07046 411 YLLNRGVLI-TPF----HNMMLVCP---ATTAADVDRLVAAFDACLGELL 452 (453)
T ss_pred HHHHCCCEE-ecc----cCcEEEeC---CCCHHHHHHHHHHHHHHHHHHh
Confidence 788888644 331 24577773 3789999999999999887653
No 368
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=98.87 E-value=3.1e-07 Score=84.27 Aligned_cols=208 Identities=12% Similarity=0.022 Sum_probs=118.8
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccC-C---hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVD-T---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~-p---l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|++++++.|.+. +..|++.......|... | +++|.++|++||+++++|.++.+. ...........++ .
T Consensus 151 d~~~l~~~i~~~------~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv-~ 222 (364)
T PRK04013 151 DVEAAKEAITKE------TAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKV-E 222 (364)
T ss_pred CHHHHHHHhcCC------cEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCC-C
Confidence 568888888532 44666666665556544 4 999999999999999999998754 3332221111233 3
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
.|++++ .|.+++....|.+..+.. . . +..... + -++.+..+.+..++++.+.+++
T Consensus 223 PDiv~~--gK~lggG~P~~a~~~~~~-~-~------~~~~~~--------------T-~~gnp~~~aaa~a~l~~i~~~~ 277 (364)
T PRK04013 223 PDIVTM--GKGIGNGVPVSLTLTNFD-V-E------RGKHGS--------------T-FGGNPLACKAVAVTLRILRRER 277 (364)
T ss_pred CCEEEe--cccccCCceeEEEEeccc-c-c------CCCcCC--------------C-CCcCHHHHHHHHHHHHHHHhcc
Confidence 787777 688876555666665433 1 1 000000 0 1122233444555666665544
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCc
Q 046506 183 LRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGK 262 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 262 (310)
+-+..++ . + ..+.. +.+.=+.. ..-.+.+.+..+ ...+...+.++|.
T Consensus 278 l~~~~~~---~---l-~~l~~-~~v~~vRG-~Gl~~gve~~~~------------------------~~~i~~~~~~~Gl 324 (364)
T PRK04013 278 LVEKAGE---K---F-IEIKG-ERVVTTRG-RGLMIGIVLKKP------------------------VGKYVEELQNRGY 324 (364)
T ss_pred HHHHHHH---H---H-HHhcc-Ccceeeee-CcEEEEEEeCCc------------------------HHHHHHHHHhCCc
Confidence 4333322 1 2 22322 22111111 123344444321 1346677777875
Q ss_pred EEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 263 AYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 263 ~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
+ +.+. +..++||.++ ...|++|++.+++.|++.+.++.
T Consensus 325 l-~~~~---g~~vlr~~Pp-l~it~~~i~~~~~~l~~~l~~~~ 362 (364)
T PRK04013 325 L-VHTA---GQRVIRLLPP-LIISKDTMEEAKSAIEGVINDIL 362 (364)
T ss_pred E-EeeC---CCCEEEEeCC-cccCHHHHHHHHHHHHHHHHHHh
Confidence 4 3322 3478999955 67999999999999999987654
No 369
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=98.86 E-value=9.8e-07 Score=83.49 Aligned_cols=219 Identities=11% Similarity=0.041 Sum_probs=114.8
Q ss_pred cEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeeeeecccccccccce
Q 046506 45 PLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDC 120 (310)
Q Consensus 45 ~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~ 120 (310)
...|++.-.....|.+.| +++|.++|++||++++.|..+.+.........-...++ ..|++ +..|.++...-.
T Consensus 220 iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v-~pDi~--t~sK~l~~G~pi 296 (451)
T PRK06918 220 IAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDV-VPDLI--TVSKSLGAGVPI 296 (451)
T ss_pred eEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCC-CCCEE--eeehhhcCCCcc
Confidence 445555544444566444 88999999999999999999865543332111001111 26744 568998865667
Q ss_pred EEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Q 046506 121 CCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERL 200 (310)
Q Consensus 121 g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~ 200 (310)
|+++.+++ .. +.+.. ..... + .++.+....+..++++.+..+. ..++..++.++++++
T Consensus 297 g~v~~~~~-i~-~~~~~--~~~~~--------------T-~~g~~l~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~ 354 (451)
T PRK06918 297 SGVIGRKE-IM-DESAP--GELGG--------------T-YAGSPLGCAAALAVLDIIEKEN---LNDRAIELGKVVMNR 354 (451)
T ss_pred EEEEEcHH-HH-hccCC--CCcCc--------------C-CCcCHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHH
Confidence 88776533 32 22210 00000 0 1111122333334555443333 333444455555555
Q ss_pred HcCC----CCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEE
Q 046506 201 VGSD----KRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAI 276 (310)
Q Consensus 201 L~~~----~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~i 276 (310)
|+++ +.+.-+.. ...++.+.+..... +..+. ......+...+.++|.+....... ..++
T Consensus 355 l~~l~~~~~~~~~vrg-~G~~~~~~~~~~~~-----------~~~~~---~~~~~~l~~~~~~~Gvlv~~~~~~--~~~l 417 (451)
T PRK06918 355 FEEMKNKYNCIGDVRG-LGAMCAFELVQDRK-----------TKEPD---KTLTANICKEANKRGLLLLSAGTY--GNVI 417 (451)
T ss_pred HHHHHhhCCCceeecc-ceeEEEEEEccCCC-----------cCCCc---HHHHHHHHHHHHHCCeEEeecCCC--CCEE
Confidence 5433 22211222 34444444421100 00000 223356667777888654332111 3679
Q ss_pred EEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 277 RFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 277 Ris~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
|++++ ...++++|+.++++|.+.+..+.+
T Consensus 418 rl~p~-l~~t~~~id~~l~~l~~~l~~~~~ 446 (451)
T PRK06918 418 RVLMP-LVITDEQLEEGLTIIEESLQACYE 446 (451)
T ss_pred EEECC-CccCHHHHHHHHHHHHHHHHHHHH
Confidence 99955 347899999999999999987654
No 370
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.82 E-value=1.2e-07 Score=84.38 Aligned_cols=241 Identities=12% Similarity=0.039 Sum_probs=148.0
Q ss_pred ccCHHHHHHHHHHHHHc---C----CCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhh
Q 046506 25 GLSPDSLMAKINSDVEA---G----LIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI 97 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~---~----~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~ 97 (310)
+.|+++||+.+.+.+.. + ..-..+++....-++|.+.|+.+|.++..+|...+++|.+++.|.+.- ..++..
T Consensus 207 hndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~-~GrGvt 285 (467)
T KOG1358|consen 207 HNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGK-TGRGVT 285 (467)
T ss_pred CCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccc-cCcccc
Confidence 45778898888654411 1 113467888888889999999999999999999999999987665432 111111
Q ss_pred ----cCCCCCCeeeeecccccccccceEEEEEeCchhHH-hhhccCCccccccccccccccCCCCceeccCCCcchHHHH
Q 046506 98 ----DGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLV-NSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLW 172 (310)
Q Consensus 98 ----~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~-~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (310)
-.+..+|.+++++.-.+. +.|.+++.+...+. +.++. ..|.++. ...++-+-
T Consensus 286 eH~~v~~~~iDiv~~sm~~ala---s~GgFc~G~~~i~~hQrLSg-~~Y~fSA-------------------slPp~la~ 342 (467)
T KOG1358|consen 286 EHFGVPITDIDIVTASMETALA---SGGGFCAGKSFIADHQRLSG-SGYCFSA-------------------SLPPYLAG 342 (467)
T ss_pred ccCCCCccceeeeeeccccccc---ccCceeecceeeEeeeeccc-cceeeec-------------------cCchhhhh
Confidence 123458899988776554 34555555332110 11111 1233222 11122122
Q ss_pred HHHHHhC-HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHH
Q 046506 173 FVLRNYG-VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNR 251 (310)
Q Consensus 173 ~~l~~~~-~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (310)
++.+.+. .++-.++.+.....+..+-+.|....++.+.+.+.++++-..+.+.. .+.+.-..+-+
T Consensus 343 aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~--------------~s~e~e~~lL~ 408 (467)
T KOG1358|consen 343 AAIKAILIEEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSY--------------GSREKEEKLLE 408 (467)
T ss_pred hHHHHHHHHhhCcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeecccc--------------cchHHHHHHHH
Confidence 2222221 23334466666677777777887777899998899999988887742 12222233445
Q ss_pred HHHHHHHhcCcEEEEEeEEC------CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 252 ELLESINASGKAYMTHAVLG------GIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 252 ~l~~~l~~~g~~~~~~~~~~------~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
++.+....++...+...... -...||+++.. ..++||++++.+.|++....+
T Consensus 409 eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~a-~~seeel~ra~~~ik~~~~~~ 466 (467)
T KOG1358|consen 409 EIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVSA-GMSEEELERAAELIKEVASAV 466 (467)
T ss_pred HHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEeC-CCCHHHHHHHHHHHHHHHHhh
Confidence 66666555554443322221 24589999775 789999999999999987654
No 371
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.80 E-value=5.1e-07 Score=80.50 Aligned_cols=226 Identities=11% Similarity=0.015 Sum_probs=133.6
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhc-CCCCC
Q 046506 29 DSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID-GVEGA 103 (310)
Q Consensus 29 ~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~ 103 (310)
++|++.|...+.+. +...++.......|++++ +++..++|+++|..++.|.+|.++......+ ++.. ++ -.
T Consensus 199 ~~l~d~i~~~~~~~--vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~w-gfe~h~v-~P 274 (442)
T KOG1404|consen 199 KELEDLILYDGPET--VAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMW-GFESHGV-VP 274 (442)
T ss_pred HHHHHHHHhcCCCc--eeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccccc-cccccCC-Cc
Confidence 45566665544322 445666666666788776 8899999999999999999998877655221 1111 11 25
Q ss_pred CeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHH
Q 046506 104 DSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANL 183 (310)
Q Consensus 104 D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 183 (310)
|++++ -|.++.....|.+++.++ . .+.+..+..|.+..+ |.+..+....++++.+ ..
T Consensus 275 DIvTm--AKgiGnG~Pl~AVvtt~E-I-a~v~~~~~~~fnTyg----------------gnP~a~avg~aVL~Vi---ke 331 (442)
T KOG1404|consen 275 DIVTM--AKGIGNGFPLGAVVTTPE-I-ADVLNQKSSHFNTYG----------------GNPVACAVGLAVLKVI---KE 331 (442)
T ss_pred cHHHH--HhhccCCCcceeeecCHH-H-HHHHHhccccccccC----------------CCchhHHHHHHHHHHH---HH
Confidence 77765 588887777888877655 2 233322222333221 1122233333444433 45
Q ss_pred HHHHHHHHHHHHHHHHHHcCC-CCeEEecCCCc-e-EEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhc
Q 046506 184 RHFLRSHVNMAKLFERLVGSD-KRFEVVFPRHF-A-VVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINAS 260 (310)
Q Consensus 184 ~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~~~~-~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 260 (310)
+++.++..+...+|.+.|.++ .+.+++++.+. + ++.+-+..... .+.+++ ......+.+.+.+.
T Consensus 332 e~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~-----------~~~pp~--~~~~~~i~~~cke~ 398 (442)
T KOG1404|consen 332 ENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKS-----------EPKPPA--TAEGAVIGEQCKEL 398 (442)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccC-----------CCCCcc--hHHHHHHHHHHHHh
Confidence 677788888999999999876 46677765432 2 23333332210 001111 22334566777777
Q ss_pred CcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHH
Q 046506 261 GKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVV 297 (310)
Q Consensus 261 g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l 297 (310)
|.+. ......+. ++||++. .-.|+||||.+++..
T Consensus 399 Gvlv-g~g~i~G~-vfriaPP-lciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 399 GVLV-GKGGIHGN-VFRIAPP-LCITKEDIDFAVEYF 432 (442)
T ss_pred Ceee-ecccccce-EEEecCC-eeccHHHHHHHHHHH
Confidence 7544 32223333 9999966 569999998888866
No 372
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.77 E-value=4.6e-08 Score=88.24 Aligned_cols=111 Identities=19% Similarity=0.182 Sum_probs=75.6
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCC--cccccCChHHHHHHHHHhCcEEEeec
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTT--AITAVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~--~~G~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
.+.|.+ ++.+-.. + .-...+++.+|.+++. ++.-++.++ .+|. .++++++++||++|++++||.
T Consensus 129 ~~aG~~---l~EvG~t--n--~t~~~d~~~AIne~ta------~llkV~s~~~~f~~~-l~~~~l~~ia~~~~lpvivD~ 194 (395)
T COG1921 129 RLAGAK---LVEVGTT--N--RTHLKDYELAINENTA------LLLKVHSSNYGFTGM-LSEEELVEIAHEKGLPVIVDL 194 (395)
T ss_pred HHcCCE---EEEeccc--C--cCCHHHHHHHhccCCe------eEEEEeecccccccc-ccHHHHHHHHHHcCCCEEEec
Confidence 344554 6666554 2 5778999999999865 444455543 3343 468889999999999999999
Q ss_pred ccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHH
Q 046506 82 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLV 132 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~ 132 (310)
+-|.-.-.-+..++.+. .++|.+++|++|.|++|. .|++ +..++++.
T Consensus 195 aSg~~v~~e~~l~~~la--~GaDLV~~SgdKllgGPq-aGii-~GkKelI~ 241 (395)
T COG1921 195 ASGALVDKEPDLREALA--LGADLVSFSGDKLLGGPQ-AGII-VGKKELIE 241 (395)
T ss_pred CCccccccccchhHHHh--cCCCEEEEecchhcCCCc-cceE-echHHHHH
Confidence 87543222222233222 369999999999999996 4544 56666653
No 373
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.76 E-value=1.1e-06 Score=81.22 Aligned_cols=237 Identities=14% Similarity=0.067 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEE-eccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCA-TIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~-~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
.++||++|.+... .....+++ .......|.+.| ++++.++|++||++|+.|..-.++...+..+.--..++ -
T Consensus 200 a~~le~~i~~~g~--~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi-~ 276 (449)
T COG0161 200 ADELEALILEHGP--ETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGI-V 276 (449)
T ss_pred HHHHHHHHHhcCc--ccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCC-C
Confidence 5677777766431 12223333 222333566655 89999999999999999998766665554433212223 2
Q ss_pred CCeeeeecccccccc-cceEEEEEeCchhHHhhhccCC-ccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCH
Q 046506 103 ADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNP-EYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGV 180 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~-~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 180 (310)
.|++++ .|.+.+. ...|.+++.++ .. +.+.... .-+.+ ++..+ ...+++.+++..+..
T Consensus 277 PDi~~~--aKGLT~GY~Pl~a~l~~~~-I~-~~~~~~~~~~f~H--------------G~TYs--ghPlacAaAla~L~i 336 (449)
T COG0161 277 PDILCL--AKGLTGGYLPLSAVLTSDR-IY-EAFSDGDAGAFMH--------------GHTYS--GNPLACAAALANLDI 336 (449)
T ss_pred CCeeee--cccccccchhhHhHhhhHH-HH-HHHhcccCCeecc--------------CCccc--cCHHHHHHHHHHHHH
Confidence 687776 4776542 22344455444 33 2222110 00000 00111 234555555554433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcC-CCCeEEecCC-Cce-EEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHH
Q 046506 181 ANLRHFLRSHVNMAKLFERLVGS-DKRFEVVFPR-HFA-VVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESI 257 (310)
Q Consensus 181 ~~~~~~~~~~~~~a~~l~~~L~~-~~~~~v~~~~-~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (310)
-.-+.+.++..++..+|.+.|++ +++-..+... ..+ +..+.+....- .+ .+. -.+....+.+..
T Consensus 337 ~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~---t~------~~f----~~~~~~~~~~~~ 403 (449)
T COG0161 337 LEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKA---TK------TPF----EARVGARVRAAA 403 (449)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccc---cc------cch----hhhHHHHHHHHH
Confidence 33355566666788888888876 4433344332 233 33344443210 00 000 123345677777
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
.++|. ++.|. ...+=+++. +-.|++||+.+++++.+.+....+
T Consensus 404 ~e~Gl-~iRp~----g~~i~~~PP-liit~~eid~l~~~l~~al~~~~~ 446 (449)
T COG0161 404 LERGL-LIRPL----GDVIYLMPP-LIITREEIDELVDALREALDETLA 446 (449)
T ss_pred HHCCe-EEeec----CCEEEEcCC-ccCCHHHHHHHHHHHHHHHHHHHh
Confidence 78874 55443 235666744 568999999999999999876543
No 374
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.67 E-value=7e-07 Score=89.25 Aligned_cols=209 Identities=15% Similarity=0.135 Sum_probs=125.7
Q ss_pred EEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeeeeecccccccccc-----e
Q 046506 46 LFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD-----C 120 (310)
Q Consensus 46 ~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-----~ 120 (310)
..|++. .++..|.+.++++|++++|+.|++++ +++--......... +--++|++ ++.++-|+.|.| .
T Consensus 210 ~~v~vq-~P~~~G~i~d~~~i~~~~h~~gal~~-~~~d~laL~ll~~P-----ge~GADI~-vG~~Q~fGvp~~~GGP~a 281 (954)
T PRK12566 210 FGALLQ-YPDTHGEIRDLRPLIDQLHGQQALAC-VAADLLSLLVLTPP-----GELGADVV-LGSTQRFGVPMGYGGPHA 281 (954)
T ss_pred EEEEEE-CCCCceEEccHHHHHHHHHHcCCEEE-EEeCHHHHhCCCCh-----hhcCCcEE-eeCCCcCCCCCCCCCCCe
Confidence 344444 44568999999999999999999855 55432222111110 11269998 555565666544 4
Q ss_pred EEEEEeCchhHHhhhccCCccccccccccccccCCCCceecc----CCC--cc-------h-HHHH--HHHHHhCHHHHH
Q 046506 121 CCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITL----SRR--FR-------S-LKLW--FVLRNYGVANLR 184 (310)
Q Consensus 121 g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~----~~~--~~-------~-~~~~--~~l~~~~~~~~~ 184 (310)
|++.++++ +.+ ..|..+-+...+..+-+-++. ++|. =|| +. + +++. ..+-++|.+|+.
T Consensus 282 g~~a~~~~--~~R---~~PGRivG~s~D~~G~~a~~l-~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~ 355 (954)
T PRK12566 282 AYFACRDD--YKR---AMPGRIIGVSRDARGNTALRM-ALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLK 355 (954)
T ss_pred eeeeehHH--HHh---hCCCCccceeecCCCCeeeeh-hhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHH
Confidence 56666543 223 235555555433323222211 1111 122 10 0 1222 223346999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEE
Q 046506 185 HFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAY 264 (310)
Q Consensus 185 ~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~ 264 (310)
++.++++.++.++++.|.+ +|+++...+-++.+.+.+... ..++.++..+.|.-.
T Consensus 356 ~ia~~~~~~a~~l~~~l~~-~g~~~~~~~fF~~~~v~~~~~------------------------~~~~~~~a~~~~~n~ 410 (954)
T PRK12566 356 RIAQRVHRLTAILAAGLEA-KGIKRLNRHFFDTLTLEVGGA------------------------QAAIIESAEAARINL 410 (954)
T ss_pred HHHHHHHHHHHHHHHHHHh-cCCccccCCccceEEEEccCC------------------------HHHHHHHHHHCCCee
Confidence 9999999999999999998 699998776677777776311 134555555555322
Q ss_pred EEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHH
Q 046506 265 MTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQ 298 (310)
Q Consensus 265 ~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~ 298 (310)
.. . +...+.+|+-- -+|++|++.+++++.
T Consensus 411 r~---~-~~~~~~~s~de-~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 411 RI---L-GRGRLGVSLDE-TCDEATVARLFDIFL 439 (954)
T ss_pred EE---e-CCCeEEEEeCC-CCCHHHHHHHHHHhc
Confidence 21 1 23468899775 589999999999984
No 375
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=98.65 E-value=3.9e-05 Score=69.55 Aligned_cols=261 Identities=10% Similarity=0.146 Sum_probs=136.5
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcC---CCc-EEEEEeccCCcccccCChH---HHHHHHHHhCc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAG---LIP-LFLCATIGTTAITAVDTLK---PLCDVAKQFGI 75 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~---~~~-~~v~~~~~~~~~G~~~pl~---~I~~l~~~~g~ 75 (310)
.+.+|+. ++.|+.|.+ .+++|.|++.+...+... .+| ++=++..+.|++|.-..++ +|.++|++|++
T Consensus 165 ~~a~gv~---~ipv~md~~---Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDf 238 (472)
T KOG0634|consen 165 MEALGVK---IIPVKMDQD---GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDF 238 (472)
T ss_pred ccccCce---EEeccccCC---CCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCE
Confidence 3445654 677777654 499999999998765431 224 3445566679999987765 59999999999
Q ss_pred EEEeecccccccccC---------hhh------hhhhcCCCCCCe----ee-eecccccccccceEEEEEeCchhHHhhh
Q 046506 76 WVHVDAAYAGSACIC---------PEF------RHFIDGVEGADS----FS-LNAHKWFFTTLDCCCLWVKDPSDLVNSL 135 (310)
Q Consensus 76 ~l~vD~a~~~~~~~~---------~~~------~~~~~~~~~~D~----~~-~~~hK~l~~p~g~g~l~v~~~~~~~~~~ 135 (310)
+++-|..+..-.+.. +.+ +.+.......|+ +. -++.|-+....-.|++-.. +..+++.+
T Consensus 239 LIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~-~~~l~ril 317 (472)
T KOG0634|consen 239 LIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGN-SLFLKRIL 317 (472)
T ss_pred EEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecC-HHHHHHHh
Confidence 999999874332221 000 000111111111 11 3456655433344444333 32333332
Q ss_pred ccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHH----HHHHHHHHHHHcC-CCCe-EE
Q 046506 136 STNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSH----VNMAKLFERLVGS-DKRF-EV 209 (310)
Q Consensus 136 ~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~a~~l~~~L~~-~~~~-~v 209 (310)
. ..+...++...+...=+++.++..|.+|+-+++.+. ......+...|.+ +|+- ..
T Consensus 318 ~------------------~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~ 379 (472)
T KOG0634|consen 318 D------------------LAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCE 379 (472)
T ss_pred h------------------hcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeE
Confidence 1 111111221113344566677777776655544433 3334445555543 4433 33
Q ss_pred ecCCCce-EEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE--C-----CEeEEEEEcc
Q 046506 210 VFPRHFA-VVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVL--G-----GIYAIRFAAG 281 (310)
Q Consensus 210 ~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~-----~~~~iRis~~ 281 (310)
+.+|..+ .+.+.+.-... .....+++.-+.+...+.+.|+..+-+... . ....+|+|+.
T Consensus 380 ~~~P~aGmFiwv~i~~~~~-------------~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a 446 (472)
T KOG0634|consen 380 YHPPKAGMFIWVEIPYINF-------------DTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIA 446 (472)
T ss_pred EecCCcceEEEEEeccccc-------------ccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEee
Confidence 4455544 44455541100 001112333345555666777644433211 1 2359999966
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH
Q 046506 282 ATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 282 ~~~~t~edi~~li~~l~~~~~~ 303 (310)
+...|+++..++.+...+++
T Consensus 447 --~a~~e~l~~g~~rf~~~ike 466 (472)
T KOG0634|consen 447 --FAEPEKLDEGIERFGSVIKE 466 (472)
T ss_pred --cCCHHHHHHHHHHHHHHHHH
Confidence 35677777777777766654
No 376
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=98.56 E-value=1.3e-05 Score=68.03 Aligned_cols=238 Identities=11% Similarity=0.021 Sum_probs=133.7
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHH-hCcEEEeec
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQ-FGIWVHVDA 81 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~-~g~~l~vD~ 81 (310)
|.+-+++ |+.+|.++ ++.++.|++.+.+..... +..+.++++.|.+|.+...+.|-++..- -|..++||.
T Consensus 128 A~iNd~e---Vvkvpl~p--dF~lnvdai~evl~~ds~----iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDE 198 (375)
T KOG0633|consen 128 AAINDAE---VVKVPLNP--DFSLNVDAIAEVLELDSK----IKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDE 198 (375)
T ss_pred eecCCce---EEEecCCC--CccccHHHHHHHHhcccc----ceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEee
Confidence 5667777 99999998 479999999999976533 6688999999999998665555555443 279999999
Q ss_pred ccccccccChhhhhhhcCCCCCCee-eeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCce
Q 046506 82 AYAGSACICPEFRHFIDGVEGADSF-SLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D~~-~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 159 (310)
|+--+........ ++. ++...+ .-+..|-|+-. .-.|+-+. +.....-......+|--+..
T Consensus 199 AYidFsg~~S~~~-lV~--kYpNLivlqTlSKsfGLAGiRvG~~~~-~~~ia~iln~~KaPYNiS~~------------- 261 (375)
T KOG0633|consen 199 AYIDFSGVESRMK-LVK--KYPNLIVLQTLSKSFGLAGIRVGYGAF-PLSIAEILNRAKAPYNISVA------------- 261 (375)
T ss_pred eeEeeccccccch-HhH--hCCceeehhhhhhhcCcceeEeecccc-cHHHHHHHHhccCCccccch-------------
Confidence 9743322111100 011 122222 24555655421 11122121 22222111222333322111
Q ss_pred eccCCCcchHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHHHcCCCCeE-EecCCCceEEEEEEcCCcchhhhhhhh
Q 046506 160 ITLSRRFRSLKLWFVLRNYG---VANLRHFLRSHVNMAKLFERLVGSDKRFE-VVFPRHFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~a~~l~~~L~~~~~~~-v~~~~~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
+--+++.++. ...++...+.+.+-..++...|.++|.+. ..++...|.+-.++.+.+
T Consensus 262 ----------~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~--------- 322 (375)
T KOG0633|consen 262 ----------GSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGD--------- 322 (375)
T ss_pred ----------hHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCC---------
Confidence 1112233332 23455556666666677888888887764 334556777777777643
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcEEEE--EeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKAYMT--HAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~--~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
+..+..+...+.....+.+. ++-....+.+|+++. |+|+-+.+++.+++.
T Consensus 323 -----------n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvG----t~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 323 -----------NGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVG----TPEENTVLMKCLKQF 374 (375)
T ss_pred -----------cHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcC----CcccchHHHHHHHhh
Confidence 33344454444433333332 122235789999854 456778888888764
No 377
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.54 E-value=1.2e-05 Score=80.60 Aligned_cols=234 Identities=12% Similarity=0.056 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHH--cCCCcEEEEEecc-CCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 29 DSLMAKINSDVE--AGLIPLFLCATIG-TTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 29 ~~Le~~i~~~~~--~~~~~~~v~~~~~-~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
+.+++.|..... .+.....+++.-. ....|.+.| ++++.++|++||++|++|..+.++......+.-...++
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv- 645 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGC- 645 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCC-
Confidence 567777754211 1122334444432 344466654 88999999999999999999987765554332212233
Q ss_pred CCCeeeeecccccccc-cceEEEEEeCchhHHhhhccC-C-ccccccccccccccCCCCceeccCCCcchHHHHHHHHHh
Q 046506 102 GADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTN-P-EYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNY 178 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~-~-~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 178 (310)
..|++++ .|.+.+. ...|.++++++ .. +.|... . ..+.... ++ ++.+..+.+..++|+.+
T Consensus 646 ~PDIi~~--gKgLtgG~~Plaa~l~~~~-I~-~~f~~~~~~~~~~hg~------------Ty-~gnpl~cAaala~L~~~ 708 (817)
T PLN02974 646 KPDIACY--AKLLTGGLVPLAATLATEE-VF-EAFRGPSKLDALLHGH------------SY-TAHPMGCAAAAKALQWY 708 (817)
T ss_pred CCCEEee--cccccCCCCccEEEEEcHH-HH-HhhccccccCCcccCC------------CC-CcCHHHHHHHHHHHHHH
Confidence 2788887 4887765 35677776644 33 333210 0 0000000 11 12223344445556655
Q ss_pred CHH-HHHHHHHHHHHHHHHHHHHH----cCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHH
Q 046506 179 GVA-NLRHFLRSHVNMAKLFERLV----GSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNREL 253 (310)
Q Consensus 179 ~~~-~~~~~~~~~~~~a~~l~~~L----~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 253 (310)
..+ -++...++..++..++.+.| .+.|.+.=+.. ...++.+.+..... .. +. .......+
T Consensus 709 ~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg-~Gl~~~iel~~~~~---------~~-~~----~~~~a~~v 773 (817)
T PLN02974 709 KDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVS-LGTVLALELDAEGS---------GS-GY----SSLYARSV 773 (817)
T ss_pred HcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEe-eeeEEEEEEecCCc---------cc-cc----chHHHHHH
Confidence 443 23344455555555554444 44443321111 23344555543210 00 00 02234566
Q ss_pred HHHHH-hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 254 LESIN-ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 254 ~~~l~-~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
.+.+. ++|. ++.+. .++||+... +.+++++++.++++|.+.+
T Consensus 774 ~~~~~~~~Gl-~~r~~----Gnvi~l~pP-~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 774 VRRLRREDGI-YARPL----GNVVYLMCG-PTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred HHHHHHhCCE-EEEec----CCEEEEeCC-CCCCHHHHHHHHHHHHHHh
Confidence 77777 6764 44332 257898744 7899999999999998754
No 378
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.54 E-value=1.3e-05 Score=70.23 Aligned_cols=222 Identities=13% Similarity=0.130 Sum_probs=117.9
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|.++|+.+|.... ....++.-..-+-|.+.| +++..++|.+||+++++|..|.+-+.......--.+.+ .
T Consensus 195 d~eale~~l~~~~-----vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env-~ 268 (427)
T KOG1402|consen 195 DAEALEVALKSPN-----VAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENV-R 268 (427)
T ss_pred CHHHHHHHhcCCC-----eeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhc-C
Confidence 5788999887621 233444444556677665 89999999999999999999976554332211001112 3
Q ss_pred CCeeeeeccccccc-ccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFT-TLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~-p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
.|.+.+ .|.|.+ .+..+.++. +++..-. ..|.--.. ++++ ..+++..++..+.--
T Consensus 269 PDivil--gKalSGG~~Pvsavl~-~~~im~~---~~pgeHgs--------------Tygg----NpLg~~vaiAalevi 324 (427)
T KOG1402|consen 269 PDIVIL--GKALSGGVYPVSAVLA-DDDIMLN---IKPGEHGS--------------TYGG----NPLGCAVAIAALEVI 324 (427)
T ss_pred CCeEEE--eccccCCeeeeEEEEe-cHHHHhc---cCCCcccc--------------ccCC----ChHHHHHHHHHHHHH
Confidence 677765 466654 222333433 3322211 11111000 1111 233333333333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCC-CeE-EecCC--CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSDK-RFE-VVFPR--HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESI 257 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~~-~~~-v~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (310)
.-+.+.+++..+-..+++.|.+++ .+. ++... +.-+..+.+.+... .+-+. =+++-.|
T Consensus 325 ~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~-------------~~~~a-----w~~cl~l 386 (427)
T KOG1402|consen 325 VEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKT-------------SGQDA-----WDVCLAL 386 (427)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEeccccc-------------cchhH-----HHHHHcc
Confidence 446677888889999999998763 220 12111 12223333333210 01111 1233334
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
.++|. ..-++ ....|||++. .-.+++|++.-+++|.+.+
T Consensus 387 k~~g~-LAkpt---H~~IiRfaPP-L~I~e~dl~eg~e~i~k~i 425 (427)
T KOG1402|consen 387 KENGL-LAKPT---HGNIIRFAPP-LVISEEDLREGIEAIEKTI 425 (427)
T ss_pred ccccc-ccCCC---CCCeEEecCC-cccCHHHHHHHHHHHHHHh
Confidence 44542 22222 2449999966 5689999999999998754
No 379
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.51 E-value=3.8e-06 Score=74.70 Aligned_cols=206 Identities=14% Similarity=0.070 Sum_probs=131.9
Q ss_pred EEEEeccCCcccccCC-hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEE
Q 046506 47 FLCATIGTTAITAVDT-LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWV 125 (310)
Q Consensus 47 ~v~~~~~~~~~G~~~p-l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v 125 (310)
.|.+.++.|..|+..| ...+.. . .+++.|.+......+.+- ...|.+.++..|.++ |.|.+++++
T Consensus 147 yv~~~~NeTi~Gv~v~~~p~~~~---~--~~~v~D~SS~ilsr~iDv--------sk~dviyagaQKnlG-paGltvvIv 212 (365)
T COG1932 147 YVHFCWNETISGVEVPELPDIGS---D--GLLVADASSAILSRPIDV--------SKYDVIYAGAQKNLG-PAGLTVVIV 212 (365)
T ss_pred EEEEecCCcccceEccCCCCCCC---C--ceEEEecccHHhcCCCCh--------hHcceEEEehhhccC-ccceEEEEE
Confidence 5888889999998544 222221 2 889999998777766653 248999999999986 778999998
Q ss_pred eCchhHHhhhcc-CCccccccccccccccCCCCceeccCCC--cchHHHH---HHHHHh-CHHHHHHHHHHHHHHHHHHH
Q 046506 126 KDPSDLVNSLST-NPEYLKNKATESKQVVDYKDWQITLSRR--FRSLKLW---FVLRNY-GVANLRHFLRSHVNMAKLFE 198 (310)
Q Consensus 126 ~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~l~~~-~~~~~~~~~~~~~~~a~~l~ 198 (310)
+++ .+.+.-.. .|.. .+|......++.- +..++++ .+++.+ ..-|++++.++..+.++.|.
T Consensus 213 r~~-~l~r~~~~~~P~i-----------f~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY 280 (365)
T COG1932 213 RPD-LLERAESYTLPSI-----------FDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLY 280 (365)
T ss_pred cHH-HHhcccccCCchH-----------hhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 876 34443222 1211 1221111122211 1122222 233333 33478999999999999999
Q ss_pred HHHcCCCCeEEecC---CCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeE
Q 046506 199 RLVGSDKRFEVVFP---RHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYA 275 (310)
Q Consensus 199 ~~L~~~~~~~v~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~ 275 (310)
+.+.+.+-+.-... +....|+|.+.. .++...+.+.+.+.|....-+ .+-.+.
T Consensus 281 ~~id~s~fy~~~v~~~~RS~mnV~f~~~~----------------------~~ld~~fv~eae~~gl~~lkG--hr~vgG 336 (365)
T COG1932 281 DWIDKSDFYRNLVAKANRSRMNVTFTLVD----------------------AELDKGFVAEAEAAGLIYLKG--HRSVGG 336 (365)
T ss_pred HHHHhCCccccccchhhccceeEEEEcCc----------------------HHHHHHHHHHHHHcCCceecc--ccCCCc
Confidence 99988643332211 224467788775 455567777777887666554 223344
Q ss_pred EEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 276 IRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 276 iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+|+|+-+ -...|+|+.|++-++++.+.
T Consensus 337 mRasiyn-A~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 337 LRASIYN-AVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred eeeeeec-CCCHHHHHHHHHHHHHHHHh
Confidence 9999765 57889999999999887654
No 380
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.25 E-value=2.2e-05 Score=71.57 Aligned_cols=95 Identities=15% Similarity=0.073 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCC
Q 046506 29 DSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGAD 104 (310)
Q Consensus 29 ~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D 104 (310)
+.+++.+.+..... ...+++.-.....|.+.| +++|.++|++||+++++|..+.+.........-...++ ..|
T Consensus 164 ~~~~~~~~~~~~~~--iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv-~PD 240 (339)
T PF00202_consen 164 NALEELIAALNADE--IAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGV-DPD 240 (339)
T ss_dssp HHHHHHHHHHHGGG--EEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTS-SSS
T ss_pred HHHHHHHHhhcCCc--EEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccc-cCc
Confidence 34555555443322 345666555555565433 89999999999999999999977644333221112333 379
Q ss_pred eeeeecccccccccceEEEEEeCc
Q 046506 105 SFSLNAHKWFFTTLDCCCLWVKDP 128 (310)
Q Consensus 105 ~~~~~~hK~l~~p~g~g~l~v~~~ 128 (310)
+++++ |.+++....|.++++++
T Consensus 241 iv~~g--K~l~gG~p~sav~~~~~ 262 (339)
T PF00202_consen 241 IVTFG--KGLGGGLPISAVLGSEE 262 (339)
T ss_dssp EEEEE--GGGGTTSSEEEEEEEHH
T ss_pred ccccc--cchhhhhhcccccccch
Confidence 99986 99888777888887755
No 381
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.24 E-value=0.00024 Score=64.17 Aligned_cols=157 Identities=13% Similarity=0.030 Sum_probs=93.3
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+.+|++.++.++.+ ...|++.-..-..|.+.. +..|..+|+++|++++.|..+.+.........-...++ -
T Consensus 192 d~t~l~k~~~~h~~~---IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~-~ 267 (433)
T KOG1401|consen 192 DSTALEKLFESHKGE---IAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGV-T 267 (433)
T ss_pred CHHHHHHHHHhCCCc---eEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCc-C
Confidence 589999999887531 335555555544454422 77899999999999999999977555554332212222 2
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCH-H
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGV-A 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~ 181 (310)
.|..++ -|.+++....|.+.++++ .....-+.++ +.+.+ ++. +-+........+++.+.. +
T Consensus 268 PDI~t~--aK~L~gGlPigA~~v~~k-V~~~i~~~~~--l~hg~------------Tf~-gnpLacsa~~~~l~~l~~~e 329 (433)
T KOG1401|consen 268 PDITTV--AKPLGGGLPIGATGVRDK-VAEMISPGDH--LYHGG------------TFS-GNPLACSAGIKVLDELKDPE 329 (433)
T ss_pred Ccceee--hhhccCCceeEEEeehHH-HHhhcCCCCc--cccCc------------ccC-CChhhhhHHHHHHHHHcCHH
Confidence 677766 587877677888888876 2222212222 11111 111 111122233445555544 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCC
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSDK 205 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~~ 205 (310)
.+.+.......+.+.+.+.+.+-+
T Consensus 330 ~~k~vs~~~k~L~~~l~e~~~~~~ 353 (433)
T KOG1401|consen 330 TLKNVSKIGKELRKLLDEYLKKTP 353 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCC
Confidence 667777777778888888887654
No 382
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.23 E-value=8.2e-05 Score=65.91 Aligned_cols=220 Identities=13% Similarity=0.090 Sum_probs=124.6
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccc----cCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCC-
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITA----VDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV- 100 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~----~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~- 100 (310)
=+++++|++|.+..+.......+++.-..++.|. .+=++.+.++|++||+.++||..|.++...+.....-.-++
T Consensus 253 ~Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~ 332 (484)
T KOG1405|consen 253 GCLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLD 332 (484)
T ss_pred hHHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCC
Confidence 4688999999887654433345555544555543 34489999999999999999999987765553221101111
Q ss_pred CCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCH
Q 046506 101 EGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGV 180 (310)
Q Consensus 101 ~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 180 (310)
..+|+++|| |-|. +|.++ .+++.. +..|-.++.+. .|-+...+-+-.+++.+.+
T Consensus 333 ~PpD~vTFS--KK~q----~gGff-h~~~fr----pn~pYrifNTW---------------mGdP~k~lll~~vv~~I~~ 386 (484)
T KOG1405|consen 333 SPPDVVTFS--KKFQ----TGGFF-HDEEFR----PNEPYRIFNTW---------------MGDPSKNLLLEEVVQEIKR 386 (484)
T ss_pred CCccceehh--hhhh----cCccc-cCcccC----CCchHHHhhhh---------------cCChHHHHHHHHHHHHHhH
Confidence 247888886 4443 23333 233221 11122222221 2222333433444444433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcC----CCCeEEecC--CCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHH
Q 046506 181 ANLRHFLRSHVNMAKLFERLVGS----DKRFEVVFP--RHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELL 254 (310)
Q Consensus 181 ~~~~~~~~~~~~~a~~l~~~L~~----~~~~~v~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 254 (310)
+.+.+++...-++|..+|.+ .|+. ++. -+...+++.++... ....+.
T Consensus 387 ---~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~--~~~~RGrGTF~a~d~ps~~----------------------~Rdk~i 439 (484)
T KOG1405|consen 387 ---EDLLNNVAHVGKALLKGLLELQAKYPGK--INNLRGRGTFIAWDCPSGS----------------------IRDKLI 439 (484)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHhCchh--hhcccccceEEEEeCCChH----------------------HHHHHH
Confidence 34455555566667666654 3432 111 14556777777642 223555
Q ss_pred HHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 255 ESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 255 ~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
..+..+|. .+.+. +...||+-.+ .-.++.+.+.+++.+.++++.
T Consensus 440 ~~~~~nGv-~~GGC---g~~siRfRPs-Lvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 440 LIARLNGV-NLGGC---GDKSIRFRPS-LVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred HHHHHcCc-eeccc---ccceeeeccc-eeehhhhHHHHHHHHHHHhcc
Confidence 66666664 33322 3567888755 457788999999999887754
No 383
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.20 E-value=2e-06 Score=77.14 Aligned_cols=110 Identities=16% Similarity=0.084 Sum_probs=37.8
Q ss_pred CCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCc--ccc--cCChHHHHHHHHHhCcEEEeecccccc
Q 046506 11 KNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTA--ITA--VDTLKPLCDVAKQFGIWVHVDAAYAGS 86 (310)
Q Consensus 11 ~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~--~G~--~~pl~~I~~l~~~~g~~l~vD~a~~~~ 86 (310)
..++.|-+. + +..++++|++|+++|. ++.-.|.||. .|. -.+++++++++|+||+++++|.+-|..
T Consensus 113 a~lvEVGtt--N--~t~~~Dye~AI~e~Ta------~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l 182 (367)
T PF03841_consen 113 ARLVEVGTT--N--RTHLSDYEKAITENTA------ALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLL 182 (367)
T ss_dssp ----------------------------------------------------------HHHHHHHHHT--EEEE-TTHHH
T ss_pred ccccccccc--c--cccccccccccccccc------ccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCC
Confidence 346666664 2 5678999999999875 5556664444 332 357999999999999999999876432
Q ss_pred c----ccChhhhhhhcCC-CCCCeeeeecccccccccceEEEEEeCchhHH
Q 046506 87 A----CICPEFRHFIDGV-EGADSFSLNAHKWFFTTLDCCCLWVKDPSDLV 132 (310)
Q Consensus 87 ~----~~~~~~~~~~~~~-~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~ 132 (310)
. +..+........+ .++|.++||+.|.+++|. +|+++-+ ++++.
T Consensus 183 ~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aGiI~Gk-k~lI~ 231 (367)
T PF03841_consen 183 VDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ-AGIIVGK-KELIE 231 (367)
T ss_dssp HHHHTT----------CCCCT-SEEEEETTSSSSS-S--EEEEEE-HHHHH
T ss_pred cCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC-eEEEEeC-HHHHH
Confidence 1 1111111111112 469999999999999996 6776554 54554
No 384
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.04 E-value=0.00032 Score=63.00 Aligned_cols=232 Identities=14% Similarity=0.144 Sum_probs=133.3
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCccccc---CChHHHHHHHHHhCcEEEeecc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAV---DTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~---~pl~~I~~l~~~~g~~l~vD~a 82 (310)
.|++ |..-|--...+..+|.+.+-..|.+.... .+++....+.|+||.- +..++|.++.++.|..-++|-|
T Consensus 140 aGl~---v~~Y~Yyd~~~~~~df~~mla~L~~a~~~---~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~A 213 (396)
T COG1448 140 AGLE---VETYPYYDAETKGLDFDGMLADLKTAPEG---SVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIA 213 (396)
T ss_pred cCCc---eeeeeccccccccccHHHHHHHHHhCCCC---CEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehh
Confidence 5676 44444322123369999999999876431 2344445556999963 2277899999999999999999
Q ss_pred cccccccChhh--h--hhhcCCCCCCeeeeeccccccc---ccceEEEEEeCchhHHhhhcc-----CCccccccccccc
Q 046506 83 YAGSACICPEF--R--HFIDGVEGADSFSLNAHKWFFT---TLDCCCLWVKDPSDLVNSLST-----NPEYLKNKATESK 150 (310)
Q Consensus 83 ~~~~~~~~~~~--~--~~~~~~~~~D~~~~~~hK~l~~---p~g~g~l~v~~~~~~~~~~~~-----~~~y~~~~~~~~~ 150 (310)
+=++.-..++. . .+.... .-=+++.|..|.|+. -.|+-.++..+.+...+.++- ...|..+..
T Consensus 214 YQGF~~GleeDa~~lR~~a~~~-~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~---- 288 (396)
T COG1448 214 YQGFADGLEEDAYALRLFAEVG-PELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPA---- 288 (396)
T ss_pred hhhhccchHHHHHHHHHHHHhC-CcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCch----
Confidence 74444333221 1 111111 114677999999875 234444444444433332211 111111110
Q ss_pred cccCCCCceeccCCCcchHHHHH------HHHHhCHHHHHHHHHHHHHHHHHHHHHHcCC-C--CeEEecCCCceEEEEE
Q 046506 151 QVVDYKDWQITLSRRFRSLKLWF------VLRNYGVANLRHFLRSHVNMAKLFERLVGSD-K--RFEVVFPRHFAVVCFR 221 (310)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~------~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~-~--~~~v~~~~~~~~v~~~ 221 (310)
..+.+.+ .|++.-...++.+++|+.++++.|.+.|++. + .+..+ ..+.+.++|
T Consensus 289 ----------------~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i-~~Q~GMFsy- 350 (396)
T COG1448 289 ----------------HGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFI-ISQRGMFSY- 350 (396)
T ss_pred ----------------hhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchH-hhcCceeec-
Confidence 1111111 2333445667888999999999999999873 2 35444 223333433
Q ss_pred EcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 222 VSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
.+-+ .+-..+|.++..+|.... . |+++.. .++..|+.+.++|.++
T Consensus 351 -~Gls------------------------~~QV~rLree~~IY~v~s----G---Ri~vaG--l~~~ni~~va~ai~~v 395 (396)
T COG1448 351 -TGLS------------------------PEQVDRLREEFGIYLVAS----G---RINVAG--LNTSNIDYVAKAIAAV 395 (396)
T ss_pred -CCCC------------------------HHHHHHHHHhccEEEecC----C---eeeecc--CChhhHHHHHHHHHhh
Confidence 3432 233466766666665432 1 999664 6788999999999875
No 385
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.97 E-value=1.4e-05 Score=67.97 Aligned_cols=169 Identities=15% Similarity=0.140 Sum_probs=97.4
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCC--cccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTT--AITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~--~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+|++ -++.-|+-+.+....|++.+++.|.+... -.++|+.+.++ ..-..+.+++|+.+|..|+++-+|..|+
T Consensus 123 agfe--piiie~i~d~d~l~tdleav~~~iee~g~----dcilci~sttscfapr~pd~leaiaaica~~diphivnnay 196 (432)
T KOG3843|consen 123 AGFE--PIIIENILDGDELITDLEAVEAIIEELGE----DCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAY 196 (432)
T ss_pred cCCC--ceeeeccccchHHHHhHHHHHHHHHHhCC----ceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhcccc
Confidence 4565 23333333333456789999999987532 22444433222 2233577999999999999999999998
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccC
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLS 163 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 163 (310)
|...-..-..-......+.+|.++-|.-|.|+.|.|..++..-+...+......-|+ ..+
T Consensus 197 glqsee~i~~iaa~~~~grida~vqsldknf~vpvggaiia~fk~n~iq~iak~ypg---ras----------------- 256 (432)
T KOG3843|consen 197 GLQSEECIHKIAAAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQEIAKMYPG---RAS----------------- 256 (432)
T ss_pred ccchHHHHHHHHHHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHHHHHHhCCC---ccc-----------------
Confidence 754321111000112245789999999999999998877654444333222111111 110
Q ss_pred CCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Q 046506 164 RRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLV 201 (310)
Q Consensus 164 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L 201 (310)
....+.+..++...|..++.+......++--+++..+
T Consensus 257 -a~ps~dllitll~~gqn~f~e~~~eqkemf~~l~~ki 293 (432)
T KOG3843|consen 257 -ASPSLDLLITLLSLGQNAFKELFGEQKEMFLKLRNKI 293 (432)
T ss_pred -cCccHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHH
Confidence 0123455566666677776666655555544444444
No 386
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=97.88 E-value=0.00029 Score=63.49 Aligned_cols=240 Identities=14% Similarity=0.143 Sum_probs=122.1
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHH-HHHhCcEEE
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDV-AKQFGIWVH 78 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l-~~~~g~~l~ 78 (310)
++.+|++ .+.||.+++| .|+|.+|+++.++.. ...+.|+...+|++|...- +++++.+ ....+..++
T Consensus 141 ~E~~Gie---mi~VpM~~dG---PDmD~Ve~LV~~D~s---vKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~ 211 (425)
T PF12897_consen 141 TEHFGIE---MIPVPMTEDG---PDMDMVEELVAEDPS---VKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIF 211 (425)
T ss_dssp HHHCT-E---EEEEEEETTE---E-HHHHHHHTHTSTT---EEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEE
T ss_pred HHhhCcE---EEecCCCCCC---CCHHHHHHHHhcCCc---cceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEE
Confidence 4678998 9999999864 999999999976533 2347899999999998744 5666666 346789999
Q ss_pred eecccccccccChhhh-------hhhcCCCCCCe--eeeecccccccccceEEEEEeCch--hHHhhhccCCcccccccc
Q 046506 79 VDAAYAGSACICPEFR-------HFIDGVEGADS--FSLNAHKWFFTTLDCCCLWVKDPS--DLVNSLSTNPEYLKNKAT 147 (310)
Q Consensus 79 vD~a~~~~~~~~~~~~-------~~~~~~~~~D~--~~~~~hK~l~~p~g~g~l~v~~~~--~~~~~~~~~~~y~~~~~~ 147 (310)
=|.|++...+..+... ..+...+..|. +..|..|.-+...|.+++...... ++.+.+.. .-+..
T Consensus 212 WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~--~tIgp--- 286 (425)
T PF12897_consen 212 WDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSV--QTIGP--- 286 (425)
T ss_dssp EE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHH--H-S-----
T ss_pred eecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhcC--ceeCc---
Confidence 9999988887322111 11111223443 558889987766666666544331 22222110 00000
Q ss_pred ccccccCCCCceeccCCCcchHHHHHHHHHh-CHH-HHHHHHHHHHHH--------HHHHHHHHc-CCCCeEEecCC-Cc
Q 046506 148 ESKQVVDYKDWQITLSRRFRSLKLWFVLRNY-GVA-NLRHFLRSHVNM--------AKLFERLVG-SDKRFEVVFPR-HF 215 (310)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~-~~~~~~~~~~~~--------a~~l~~~L~-~~~~~~v~~~~-~~ 215 (310)
.-+....-.+++ ..+ |+++.++++.++ .+.|.+.|. .. ++--...| ..
T Consensus 287 -------------------dKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~-~ia~Wt~P~GG 346 (425)
T PF12897_consen 287 -------------------DKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGL-GIASWTKPKGG 346 (425)
T ss_dssp --------------------HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGG-TSEEE---SBS
T ss_pred -------------------cHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCC-CeeEecCCCCc
Confidence 001111112222 234 666666655544 355666676 33 44334444 45
Q ss_pred eEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEE-EeEE-----CCEeEEEEEccCCCCCHHH
Q 046506 216 AVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMT-HAVL-----GGIYAIRFAAGATLTEERH 289 (310)
Q Consensus 216 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~~-----~~~~~iRis~~~~~~t~ed 289 (310)
..++|...+.. +..+.+...+.|..... +..+ ....-||++.+ +-+.||
T Consensus 347 YFIsld~~~G~-----------------------AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS--~P~lee 401 (425)
T PF12897_consen 347 YFISLDVLDGT-----------------------AKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPS--YPSLEE 401 (425)
T ss_dssp S-EEEEESTT------------------------HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--S--SS-HHH
T ss_pred eEEEEecCCCh-----------------------HHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCC--CCCHHH
Confidence 67888888753 13445555566754443 1111 23568999954 578899
Q ss_pred HHHHHHHHHHHH
Q 046506 290 VMVAWTVVQEHL 301 (310)
Q Consensus 290 i~~li~~l~~~~ 301 (310)
++..++.+.-..
T Consensus 402 l~~Am~~~~~cv 413 (425)
T PF12897_consen 402 LETAMDVFATCV 413 (425)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999888876444
No 387
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=97.46 E-value=0.019 Score=51.92 Aligned_cols=70 Identities=16% Similarity=0.197 Sum_probs=59.8
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCccccc---CChHHHHHHHHHhCcEEEeeccc
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAV---DTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~---~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
.+.--.|+...|.+|.++|++.+++.. .+..|+.+|+..+.|.+|.+ ..|++|..+|+++|+.|+.|..+
T Consensus 185 ~v~YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVY 257 (475)
T KOG0258|consen 185 QVPYYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVY 257 (475)
T ss_pred ccceeeccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHH
Confidence 444446776789999999999999987 67888888888888999986 56999999999999999999975
No 388
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=97.42 E-value=0.0098 Score=51.95 Aligned_cols=241 Identities=9% Similarity=0.025 Sum_probs=132.5
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
.-.+.+++.+.+.-..+......+..+-.+-.|.+.| ++++++-.|.+|-.++.|..|.++......+-.+-..-.
T Consensus 191 ~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~f 270 (452)
T KOG1403|consen 191 LYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNF 270 (452)
T ss_pred hhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhcc
Confidence 4457788888776554433323333444455676655 788999999999999999999777655543211111101
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhhcc-CCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCH
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLST-NPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGV 180 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 180 (310)
-.|+++++ |-++-....+.+...++ +-++|.. .-.|....+ |-+-..+...+.++..
T Consensus 271 iPDIVtmg--KpmGNGhPVa~Vattke--IA~Af~atgv~YFNTyG----------------GnPVsCAv~laVm~v~-- 328 (452)
T KOG1403|consen 271 IPDIVTMG--KPMGNGHPVAAVATTKE--IAQAFHATGVEYFNTYG----------------GNPVSCAVGLAVMRVC-- 328 (452)
T ss_pred ccchheec--ccCCCCCeeeEEeccHH--HHHHhccccceehhccC----------------CCchhHHHHHHHHHHH--
Confidence 25777653 33333222344443333 3455533 345554432 1122233333444433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCC-CCeEEecCCCc-eE-EEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHH
Q 046506 181 ANLRHFLRSHVNMAKLFERLVGSD-KRFEVVFPRHF-AV-VCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESI 257 (310)
Q Consensus 181 ~~~~~~~~~~~~~a~~l~~~L~~~-~~~~v~~~~~~-~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (310)
.-+++.++....-.+|...|+++ ...++++..+. ++ +.+.+.... .+..+. .+.+.++..+|
T Consensus 329 -e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~-----------~tRtP~---tk~A~~~v~rl 393 (452)
T KOG1403|consen 329 -EDENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDR-----------KTRTPD---TKEAHWVVNRL 393 (452)
T ss_pred -hhhhHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeeccc-----------ccCCCc---HHHHHHHHHHH
Confidence 33455666666667777666654 24455654332 22 222222110 001111 34557778888
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
.+...+.++.. -.+.+.+.|-+. -..++++.+.++..|.+++..|.
T Consensus 394 ke~y~VLlsaD-GPh~NilKiKPP-mCFneena~e~v~~ld~iLT~me 439 (452)
T KOG1403|consen 394 KELYRVLLSAD-GPHRNILKIKPP-MCFNEENADEFVLGLDEILTVME 439 (452)
T ss_pred HHhhhEEEecC-CCCCceeecCCC-cccChhhHHHHHHHHHHHHHHHH
Confidence 88765555522 124677888755 35788999999999999887553
No 389
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=97.37 E-value=0.001 Score=59.61 Aligned_cols=114 Identities=12% Similarity=0.122 Sum_probs=69.3
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccC--Cc--ccccCChHHHHHHHHHh--CcEE
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGT--TA--ITAVDTLKPLCDVAKQF--GIWV 77 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~--~~--~G~~~pl~~I~~l~~~~--g~~l 77 (310)
.-+|+. ...||..+++ .+|.+.++++|++.+ .+|.+.=.. +. .=++++|+++.+.+|+. ++.+
T Consensus 125 ~e~Gi~---Y~~v~L~~dg--~~D~~~i~~~~~~~t------k~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~ii 193 (403)
T PF06838_consen 125 KEFGIK---YREVPLTEDG--TIDWEAIKKALKPNT------KMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVII 193 (403)
T ss_dssp GGGT-E---EEE--B-TTS--SB-HHHHHHHHHTTE------EEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEE
T ss_pred HHhCce---eEEEeecCCC--CcCHHHHHHhhccCc------eEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEE
Confidence 345676 8899999765 999999999999653 366664332 11 12256677777788876 6899
Q ss_pred EeecccccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhh
Q 046506 78 HVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNS 134 (310)
Q Consensus 78 ~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~ 134 (310)
+||.++|-+.-... + ..+ ++|.+..|.=|..++. ..+|..++.+.++++++
T Consensus 194 fVDNCYGEFvE~~E---P--~~v-GADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~ 245 (403)
T PF06838_consen 194 FVDNCYGEFVETQE---P--TEV-GADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERA 245 (403)
T ss_dssp EEE-TTTTTTSSS----G--GGG-T-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHH
T ss_pred EEeCCcceeccccC---c--ccc-chhheeccceeCCCCCccCcCCEEechHHHHHHH
Confidence 99999975543221 1 112 6999999999998862 34566667777665544
No 390
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=96.79 E-value=0.038 Score=48.01 Aligned_cols=167 Identities=16% Similarity=0.090 Sum_probs=95.0
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC-cchHHHHHHHHHhC-
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWFVLRNYG- 179 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~- 179 (310)
..+.+..++.|..+ |.|.-++++|+. .+.+.....|.-+.-.-. + .+.++-.+-+ +.....-..++.+-
T Consensus 195 k~gvi~aGAQKN~G-~aG~Tvvivr~d-llg~~~~~tP~v~dyk~~------~-~NnSlyNTpP~f~iy~~~Lv~~~il~ 265 (370)
T KOG2790|consen 195 KFGVIFAGAQKNVG-PAGVTVVIVRKD-LLGNALDITPSVLDYKIM------D-KNNSLYNTPPCFGIYVMGLVFEWILE 265 (370)
T ss_pred hcceEEeccccccC-ccccEEEEEehh-hhcccccCCccccceeee------c-cccccccCCCeeeeeehhhHHHHHHh
Confidence 46789999999976 778888888876 343333222211110000 0 0000000011 22222223344432
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEec-CC---CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHH
Q 046506 180 VANLRHFLRSHVNMAKLFERLVGSDKRFEVVF-PR---HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLE 255 (310)
Q Consensus 180 ~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~-~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 255 (310)
.-|+.++.+...+.++.+.+.|.+..||-.+. +| .-..|+|++.+. ++..++.+
T Consensus 266 ~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~~~RS~MNV~Fri~~d----------------------~Le~eFLk 323 (370)
T KOG2790|consen 266 KGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEPSVRSRMNVPFRIEKD----------------------ELEAEFLK 323 (370)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhcCCeEEcccchhhhhhcccceeecch----------------------HHHHHHHH
Confidence 34678888888899999999999877886653 12 234578998863 22233333
Q ss_pred HHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 256 SINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 256 ~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
.-.+++ +++.--++..+.||-|+-+ ..+-|++..|++-+++..+
T Consensus 324 eA~~~~--mv~LKGhRSVGGiRASlYN-Aisv~~~q~L~~~m~~F~k 367 (370)
T KOG2790|consen 324 EAAKEH--MVQLKGHRSVGGIRASLYN-AISVEEVQKLAAFMKEFQK 367 (370)
T ss_pred HHHHhh--hhccccccccccchhhhhc-cccHHHHHHHHHHHHHHHH
Confidence 333332 1111112345678999776 4888999999988888764
No 391
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.30 E-value=0.14 Score=49.39 Aligned_cols=212 Identities=16% Similarity=0.090 Sum_probs=117.6
Q ss_pred EEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEe
Q 046506 47 FLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVK 126 (310)
Q Consensus 47 ~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~ 126 (310)
.+.+..+.+ .|.+.+..++++.+++.|..+++-.-..+-.+.-+ .+-.++|+...|... |+.|.|=|.=...
T Consensus 250 gvlvQYP~t-~G~i~d~~el~~~a~~~~s~vv~atDLLaLtiLrp------PgefGaDIavGSsQR-FGVPlGYGGPHAa 321 (1001)
T KOG2040|consen 250 GVLVQYPDT-EGSVLDFDELVELAHANGSLVVMATDLLALTILRP------PGEFGADIAVGSSQR-FGVPLGYGGPHAA 321 (1001)
T ss_pred EEEEEcCCC-CCcccCHHHHHHHhhccCceEEEeehhhHHHccCC------hhhcCceeeeccccc-cCccccCCCchHH
Confidence 455554444 69999999999999999988665432211111111 111269999988887 5788777642111
Q ss_pred CchhHHhhhccCCccccccccccccccCCCCceec----cCCC--c-----chHHHHH-----HHHHhCHHHHHHHHHHH
Q 046506 127 DPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQIT----LSRR--F-----RSLKLWF-----VLRNYGVANLRHFLRSH 190 (310)
Q Consensus 127 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~----~~~~--~-----~~~~~~~-----~l~~~~~~~~~~~~~~~ 190 (310)
--..........|+.+-+-..+..+-.-++ ..+| --|| + .+-++.+ ..-+.|.+|++++.++.
T Consensus 322 FfAv~~~l~R~mPGRiiGvtkD~~gk~a~R-LALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrv 400 (1001)
T KOG2040|consen 322 FFAVSESLVRMMPGRIIGVTKDALGKEAYR-LALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRV 400 (1001)
T ss_pred HHHHHHHHHhhCCCceEeeeecccccHHHH-HHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHH
Confidence 000001112233444433322111100000 0001 0122 1 0111111 11135899999999999
Q ss_pred HHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcC-cEEEEEeE
Q 046506 191 VNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASG-KAYMTHAV 269 (310)
Q Consensus 191 ~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~~ 269 (310)
+..+-.|..+|++. |-++.+.+-+..+.+++.... +++.++-.++. ++...
T Consensus 401 h~~T~~l~~~l~~a-ghel~~k~fFDTLkI~~~~s~------------------------~~~l~rA~~~~iNlr~~--- 452 (1001)
T KOG2040|consen 401 HNLTLILAEGLKNA-GHELQHKPFFDTLKIRCGCSA------------------------EEVLDRAAKRQINLRLV--- 452 (1001)
T ss_pred HHHHHHHHHHHhhc-chhhccccccceEEEEecCcH------------------------HHHHHHHHhhcCceEEe---
Confidence 99999999999975 778877777777777776521 23333333332 22111
Q ss_pred ECCEeEEEEEccCCCCCHHHHHHHHHHHH
Q 046506 270 LGGIYAIRFAAGATLTEERHVMVAWTVVQ 298 (310)
Q Consensus 270 ~~~~~~iRis~~~~~~t~edi~~li~~l~ 298 (310)
..+.|-+|+-- -++++|+|.++..+.
T Consensus 453 --ed~tigvslDE-Tv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 453 --EDGTIGVSLDE-TVTEKDVDDLLWVFN 478 (1001)
T ss_pred --ecCceEEeecc-cccHHHHHHHHHHHc
Confidence 23456677554 588999999998886
No 392
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=95.28 E-value=0.036 Score=48.54 Aligned_cols=110 Identities=15% Similarity=0.124 Sum_probs=70.3
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEecc--CCc--ccccCChHHHHHHHHHh--CcEEE
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIG--TTA--ITAVDTLKPLCDVAKQF--GIWVH 78 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~--~~~--~G~~~pl~~I~~l~~~~--g~~l~ 78 (310)
-+|++ ...||...++ ++|.+.++..|+++++ +|.+.-. ... .=.+.+|+++..+.++- |+.++
T Consensus 137 dfgi~---Y~~v~Lt~~g--kiD~~~v~~~i~~~tk------li~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivF 205 (416)
T COG4100 137 DFGIK---YKAVPLTADG--KIDIQAVKTAISDRTK------LIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVF 205 (416)
T ss_pred HhCcc---eeecccccCC--cccHHHHHHhcCccce------EEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEE
Confidence 45776 7889998755 9999999999998764 4544322 111 22356677777777775 68999
Q ss_pred eecccccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhH
Q 046506 79 VDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDL 131 (310)
Q Consensus 79 vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~ 131 (310)
||.++|-+.- ...+ ..+ ++|.+..|.=|.-++. .-+|..+....++.
T Consensus 206 VDNCYGEFvE---~~EP--t~v-GaDliAGSLIKNpGGgiaktGGYiaGk~~~v 253 (416)
T COG4100 206 VDNCYGEFVE---EKEP--THV-GADLIAGSLIKNPGGGIAKTGGYIAGKAELV 253 (416)
T ss_pred Eeccchhhhh---ccCc--ccc-chhhhccceeeCCCCceeeccceeechHHHH
Confidence 9999975432 1111 112 5999999999975542 22333344444443
No 393
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=93.70 E-value=1.6 Score=38.76 Aligned_cols=221 Identities=14% Similarity=0.172 Sum_probs=118.5
Q ss_pred cccCHHHHHHHHHHHHHcCCCcEEEEEecc-CCcccccCC----hHHHHHHHHHhCcEEEeecccccccccC---hhh--
Q 046506 24 YGLSPDSLMAKINSDVEAGLIPLFLCATIG-TTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACIC---PEF-- 93 (310)
Q Consensus 24 ~~id~~~Le~~i~~~~~~~~~~~~v~~~~~-~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~---~~~-- 93 (310)
-.+|++-+.+.|...+.. .++++-.| .|++| +|| ...|++..++.+...+.|-|+-+++-.- +.+
T Consensus 161 k~~d~e~~Lsdl~~APe~----si~iLhaCAhNPTG-mDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAi 235 (410)
T KOG1412|consen 161 KCVDLEGFLSDLESAPEG----SIIILHACAHNPTG-MDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAI 235 (410)
T ss_pred ceecHHHHHHHHhhCCCC----cEEeeeccccCCCC-CCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHH
Confidence 368989888888776432 13333333 57777 566 5579999999999999999864433211 111
Q ss_pred hhhhcCCCCC-Ceeeeeccccccc---ccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchH
Q 046506 94 RHFIDGVEGA-DSFSLNAHKWFFT---TLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSL 169 (310)
Q Consensus 94 ~~~~~~~~~~-D~~~~~~hK~l~~---p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (310)
+.+++. +. =+++-|+-|.|+- -.|+=-+.++++..+....+-..--+... ++- +.+.
T Consensus 236 R~fV~~--g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~------------~SN-----PPAy 296 (410)
T KOG1412|consen 236 RYFVEQ--GFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSN------------WSN-----PPAY 296 (410)
T ss_pred HHHHhc--CCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhc------------cCC-----Ccch
Confidence 111221 23 2456788888774 24554556676654322111000000000 000 0111
Q ss_pred HHHHHHHHh--------CHHHHHHHHHHHHHHHHHHHHHHcCC--CCe-EEecCCCceEEEEEEcCCcchhhhhhhhccc
Q 046506 170 KLWFVLRNY--------GVANLRHFLRSHVNMAKLFERLVGSD--KRF-EVVFPRHFAVVCFRVSPSAVMDKLKTKYENS 238 (310)
Q Consensus 170 ~~~~~l~~~--------~~~~~~~~~~~~~~~a~~l~~~L~~~--~~~-~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 238 (310)
++-.+.+.+ -...+..+..|+.++...|++.|.++ ||- .-+ ..+.+. |.+.+.+
T Consensus 297 GArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI-~~QiGM--FSyTGLt------------ 361 (410)
T KOG1412|consen 297 GARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHI-TQQIGM--FSYTGLT------------ 361 (410)
T ss_pred hhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH-Hhhccc--eeecCCC------------
Confidence 111111111 12345666778888889999998875 221 000 013333 4444432
Q ss_pred cchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 239 LLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
..-.+.|.+++.+|+... + |++++. .+...+|++-.+|.+....+
T Consensus 362 ------------p~qV~~li~~h~vyLl~~----G---RInisG--LN~~NveyVAkAIde~Vr~~ 406 (410)
T KOG1412|consen 362 ------------PAQVDHLIENHKVYLLSD----G---RINISG--LNMKNVEYVAKAIDETVRAI 406 (410)
T ss_pred ------------HHHHHHHHHhceEEEecC----C---cEeeec--cccccHHHHHHHHHHHHHhh
Confidence 234566777777776543 2 788664 34457888888888877654
No 394
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=93.66 E-value=0.49 Score=42.47 Aligned_cols=239 Identities=15% Similarity=0.188 Sum_probs=121.8
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEee
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD 80 (310)
.+|+..+..++-... ...+|++.+-+-|.+... + .++++.-...|.+|. || .++|.++.++.+..-+.|
T Consensus 165 ~ag~~~~~yrYyd~~---t~gld~~g~ledl~~~p~-g--s~ilLhaCaHNPTGv-DPt~eqw~ki~~~~~~k~~~pffD 237 (427)
T KOG1411|consen 165 DAGLPVKFYRYYDPK---TRGLDFKGMLEDLGEAPE-G--SIILLHACAHNPTGV-DPTKEQWEKISDLIKEKNLLPFFD 237 (427)
T ss_pred ccCcceeeeeecccc---ccccchHHHHHHHhcCCC-C--cEEEeehhhcCCCCC-CccHHHHHHHHHHhhhccccchhh
Confidence 356664444444443 346888888887766543 2 234444444577774 44 778999999999999999
Q ss_pred cccccccccC---hhh--hhhhcCCCCCCeeeeeccccccc---ccceEEEEEeCchhHHhh---h--ccCCcccccccc
Q 046506 81 AAYAGSACIC---PEF--RHFIDGVEGADSFSLNAHKWFFT---TLDCCCLWVKDPSDLVNS---L--STNPEYLKNKAT 147 (310)
Q Consensus 81 ~a~~~~~~~~---~~~--~~~~~~~~~~D~~~~~~hK~l~~---p~g~g~l~v~~~~~~~~~---~--~~~~~y~~~~~~ 147 (310)
.|+-+++... +.+ +.+... +.-=.++-|.-|.++- -.|+=-+++.+.+.-.+. + ...|-|..+.
T Consensus 238 mAYQGfaSG~~d~DA~avR~F~~~-g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP-- 314 (427)
T KOG1411|consen 238 MAYQGFASGDLDKDAQAVRLFVED-GHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPP-- 314 (427)
T ss_pred hhhcccccCCchhhHHHHHHHHHc-CCceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCC--
Confidence 9875543221 111 111111 1112345666676653 223323344444211111 0 1112222111
Q ss_pred ccccccCCCCceeccCCCc-chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEec---CCCceEEEEEEc
Q 046506 148 ESKQVVDYKDWQITLSRRF-RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVF---PRHFAVVCFRVS 223 (310)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~---~~~~~~v~~~~~ 223 (310)
.-++|-. ..+. -..+..--...++.+.+|+....+.+.+.|... +-..-+ ..+.+.+|| .
T Consensus 315 ------------~hGArIv~~Il~-d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~-gs~~~W~hI~~QIGMF~f--T 378 (427)
T KOG1411|consen 315 ------------LHGARIVATILS-DPDLKNQWLGEVKGMADRIISMRQQLFDALEKE-GSPGNWSHITKQIGMFCF--T 378 (427)
T ss_pred ------------ccchhhhhhccC-ChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcC-CCCccHHHHHHhhheeee--c
Confidence 0111110 0000 001111122456778899999999999999864 322211 123344444 3
Q ss_pred CCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 224 PSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
+.+ .+-.++|..+..+|+... . |+|+.+ .+...|++|-++|.++.+
T Consensus 379 gl~------------------------peQv~~l~ke~~iYmT~d----G---RiS~aG--~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 379 GLN------------------------PEQVDWLTKEYHIYLTKD----G---RISMAG--LSSSNVPYLADAIHAVTK 424 (427)
T ss_pred CCC------------------------HHHHHHHHhhheeeeccC----c---eEeecc--ccccCCcccchhhHhHhc
Confidence 321 234456666655555421 2 889664 555678888888877643
No 395
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=82.33 E-value=20 Score=32.62 Aligned_cols=202 Identities=14% Similarity=0.093 Sum_probs=98.0
Q ss_pred cEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeeeeecccccc-cccceEEE
Q 046506 45 PLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFF-TTLDCCCL 123 (310)
Q Consensus 45 ~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l 123 (310)
+.+=++++++|+.|.+-. .+++.-+..++-|=|+-..++.- ... -.+-|++-|+..|.=| +..-.|..
T Consensus 138 ~~IElVTSPNNPDG~lr~-----~V~~g~~~k~I~D~AYYWPhyTp-----I~~-~aD~DiMLFT~SK~TGHAGSR~GWA 206 (363)
T PF04864_consen 138 PYIELVTSPNNPDGQLRE-----AVLNGSSGKVIHDLAYYWPHYTP-----ITA-PADHDIMLFTLSKLTGHAGSRFGWA 206 (363)
T ss_dssp GEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS--------S--B--SEEEEEHHHHCS-GGG-EEEE
T ss_pred CeEEEEeCCCCCcccccc-----hhcCCCCcceeeeeeeecccccc-----cCC-CCCCceEEEEEecccCcccccccee
Confidence 667788899999997531 13455667789998876655321 111 1246889999999533 33456889
Q ss_pred EEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC--cchHHHHHHHHH-hCHH-----HHHHHHHHHHHHHH
Q 046506 124 WVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR--FRSLKLWFVLRN-YGVA-----NLRHFLRSHVNMAK 195 (310)
Q Consensus 124 ~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~-~~~~-----~~~~~~~~~~~~a~ 195 (310)
+|++++..++.. .|+.... +.-+|- .+++.+..++.. ++.. -.+--.+...+.=+
T Consensus 207 lVKD~~Va~kM~----~y~~lnT-------------iGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~ 269 (363)
T PF04864_consen 207 LVKDEEVAKKMT----KYMELNT-------------IGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWE 269 (363)
T ss_dssp EES-HHHHHHHH----HHHHHHC-------------SS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHH
T ss_pred eecCHHHHHHHH----HHHHHhc-------------ccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHH
Confidence 999997554332 2322111 011111 244444443322 2211 11111222333345
Q ss_pred HHHHHHcCCCCeEEec-C------------CCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCc
Q 046506 196 LFERLVGSDKRFEVVF-P------------RHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGK 262 (310)
Q Consensus 196 ~l~~~L~~~~~~~v~~-~------------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 262 (310)
.|++.+.....|.+-. + |......+.+.... + .+....|.+.++
T Consensus 270 ~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~ee---------------d--------~DC~~~l~~~~I 326 (363)
T PF04864_consen 270 KLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREE---------------D--------EDCYAVLREAKI 326 (363)
T ss_dssp HHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCG---------------G--------SSHHHHHHCTTE
T ss_pred HHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcc---------------c--------ccHHHHHHhCCc
Confidence 5777777666666532 1 12334445555321 0 244555555554
Q ss_pred EEEEEeEEC-CEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 263 AYMTHAVLG-GIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 263 ~~~~~~~~~-~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
+--++...+ +...+|+|+. -++++.|.|++.|+.+
T Consensus 327 ~tr~G~~fga~~ryVRlSml---~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 327 ITRSGVLFGADSRYVRLSML---KRDDDFDQLLERLSKL 362 (363)
T ss_dssp EEEEGGGGTS-TTEEEEESS---S-HHHHHHHHHHHHCC
T ss_pred ccCCCCccCCCCCeEEEecc---CCHHHHHHHHHHHHhh
Confidence 444333222 3568999954 5688999999988754
No 396
>smart00642 Aamy Alpha-amylase domain.
Probab=75.87 E-value=6.5 Score=31.80 Aligned_cols=28 Identities=29% Similarity=0.378 Sum_probs=24.6
Q ss_pred cccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 56 AITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 56 ~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
..|+.++++++++-||++|+.+++|-+.
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V~ 92 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVVI 92 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 4577788999999999999999999763
No 397
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=66.57 E-value=3.9 Score=35.97 Aligned_cols=33 Identities=24% Similarity=0.254 Sum_probs=28.2
Q ss_pred eccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 51 TIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 51 ~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
....+..|+.++++++++.||++|+.|++|-+.
T Consensus 42 ~~vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~ 74 (316)
T PF00128_consen 42 YAVDPRFGTMEDFKELVDAAHKRGIKVILDVVP 74 (316)
T ss_dssp EEESTTTBHHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred eccccccchhhhhhhhhhccccccceEEEeeec
Confidence 345566788899999999999999999999874
No 398
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=65.66 E-value=7.3 Score=31.49 Aligned_cols=49 Identities=18% Similarity=0.297 Sum_probs=36.5
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhC--cEEEeecccccc
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFG--IWVHVDAAYAGS 86 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g--~~l~vD~a~~~~ 86 (310)
|..++++++....+ .+++. +|.+..++++.+..+++| +.+|||-..|..
T Consensus 12 ~~~~le~~les~~~------~vflL-----~~~i~~ik~ivk~lK~~gK~vfiHvDLv~Gl~ 62 (181)
T COG1954 12 DNKDLEKALESESQ------YVFLL-----TGHILNIKEIVKKLKNRGKTVFIHVDLVEGLS 62 (181)
T ss_pred hHHHHHHHhcCCCe------EEEEE-----echhhhHHHHHHHHHhCCcEEEEEeHHhcccC
Confidence 45788888876532 34443 467789999999999987 788999877654
No 399
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=62.29 E-value=5.4 Score=38.18 Aligned_cols=28 Identities=25% Similarity=0.200 Sum_probs=25.3
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+..|+.++++++++-||++|+.+++|.+
T Consensus 75 ~~fGt~~dl~~Li~~~H~~Gi~vi~D~V 102 (479)
T PRK09441 75 TKYGTKEELLNAIDALHENGIKVYADVV 102 (479)
T ss_pred cCcCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4567788899999999999999999997
No 400
>COG0386 BtuE Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]
Probab=60.55 E-value=86 Score=25.06 Aligned_cols=97 Identities=13% Similarity=0.220 Sum_probs=60.5
Q ss_pred CCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC--hHHHHHHHHH-hCcE------EEee
Q 046506 10 VKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT--LKPLCDVAKQ-FGIW------VHVD 80 (310)
Q Consensus 10 ~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p--l~~I~~l~~~-~g~~------l~vD 80 (310)
++-+..|.+-....+.--.+.||.+-.+..+.+ .+++--+.|..+..+| -++|.+.|.. ||+- +.|-
T Consensus 25 GkVlLIVNtASkCGfTpQYegLe~Ly~ky~~~G----f~VLgFPcNQF~~QEPg~~eEI~~fC~~~YgVtFp~f~Ki~Vn 100 (162)
T COG0386 25 GKVLLIVNTASKCGFTPQYEGLEALYKKYKDKG----FEVLGFPCNQFGGQEPGSDEEIAKFCQLNYGVTFPMFSKIDVN 100 (162)
T ss_pred CcEEEEEEcccccCCcHhHHHHHHHHHHHhhCC----cEEEeccccccccCCCCCHHHHHHHHHhccCceeeeeeEEeec
Confidence 344666776643334445678999999888866 5667677777776555 8899999996 7763 3555
Q ss_pred cccccccccChhhhhhhc---CCCCCCeeeeecccccc
Q 046506 81 AAYAGSACICPEFRHFID---GVEGADSFSLNAHKWFF 115 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~---~~~~~D~~~~~~hK~l~ 115 (310)
|..+-. .++.+.. +..+...+-.+.+|++-
T Consensus 101 G~~a~P-----Ly~~L~~~~~g~~~~~~IkWNFtKFLv 133 (162)
T COG0386 101 GKNAHP-----LYKYLKEQKPGKLGGKDIKWNFTKFLV 133 (162)
T ss_pred CCCCCc-----HHHHHHhcCCCCccCCccceeeEEEEE
Confidence 543222 1222211 11235777888888754
No 401
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=59.88 E-value=32 Score=28.55 Aligned_cols=53 Identities=8% Similarity=-0.047 Sum_probs=37.4
Q ss_pred HHHHHHHHHHH-HcC-CCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeec
Q 046506 29 DSLMAKINSDV-EAG-LIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 29 ~~Le~~i~~~~-~~~-~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
|++.-+++.-. +.. ...++|+++-+++..|.++|++.-+++++++|+.+|.=|
T Consensus 95 dAi~~av~rl~~~~~a~~kvvILLTDG~n~~~~i~P~~aAa~lA~~~gV~iytIg 149 (191)
T cd01455 95 EATEFAIKELAAKEDFDEAIVIVLSDANLERYGIQPKKLADALAREPNVNAFVIF 149 (191)
T ss_pred HHHHHHHHHHHhcCcCCCcEEEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEEEE
Confidence 66666665543 221 123577778888778889998888899999999888543
No 402
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=59.23 E-value=7.1 Score=38.48 Aligned_cols=35 Identities=29% Similarity=0.208 Sum_probs=29.9
Q ss_pred EeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 50 ATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 50 ~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
.-++++-.|+.++++++++-||++|+-|++|-..+
T Consensus 203 ~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~~ 237 (628)
T COG0296 203 YYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVPN 237 (628)
T ss_pred eccccccCCCHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 34556678999999999999999999999998753
No 403
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=59.05 E-value=24 Score=31.29 Aligned_cols=72 Identities=13% Similarity=0.255 Sum_probs=40.0
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHH-cCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVE-AGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~-~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
.+.|+ +..+++.-+.++.+|.+.+++.++...+ .+..-.++..+.+....=+.++-.++.+.+.++ .+++++
T Consensus 3 ~~~Gv----~~a~~TPf~~dg~iD~~~~~~li~~l~~~~Gv~gi~v~GstGE~~~Ls~eEr~~~~~~~~~~~~~~~~via 78 (293)
T PRK04147 3 NLKGV----YAALLTPFDEDGQIDEQGLRRLVRFNIEKQGIDGLYVGGSTGEAFLLSTEEKKQVLEIVAEEAKGKVKLIA 78 (293)
T ss_pred CCCce----eeeeECcCCCCCCcCHHHHHHHHHHHHhcCCCCEEEECCCccccccCCHHHHHHHHHHHHHHhCCCCCEEe
Confidence 44555 4444443334569999999999998887 665533333333332222234444566655553 245553
No 404
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=57.73 E-value=38 Score=30.04 Aligned_cols=57 Identities=16% Similarity=0.102 Sum_probs=32.5
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
++.+|.+.+++.++...+.+..-..+..+.+....=+.++-.++.+.+.+. .+++++
T Consensus 15 dg~iD~~~l~~l~~~l~~~Gv~gi~v~GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~ 74 (289)
T cd00951 15 DGSFDEDAYRAHVEWLLSYGAAALFAAGGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLA 74 (289)
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 459999999999999887665432222222222222233444555555553 356554
No 405
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=55.61 E-value=26 Score=31.32 Aligned_cols=56 Identities=16% Similarity=0.198 Sum_probs=42.4
Q ss_pred cccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh--C-cEEEe
Q 046506 24 YGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF--G-IWVHV 79 (310)
Q Consensus 24 ~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~--g-~~l~v 79 (310)
+.+|.+.+++.++...+.+..-..++-+++.+.+=+.++-.++.+.+.+. | +++++
T Consensus 20 g~vD~~a~~~lv~~li~~Gv~gi~~~GttGE~~~Ls~eEr~~v~~~~v~~~~grvpvia 78 (299)
T COG0329 20 GSVDEEALRRLVEFLIAAGVDGLVVLGTTGESPTLTLEERKEVLEAVVEAVGGRVPVIA 78 (299)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECCCCccchhcCHHHHHHHHHHHHHHHCCCCcEEE
Confidence 58999999999999888776555566666666666677788888888885 2 55553
No 406
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=54.92 E-value=39 Score=30.35 Aligned_cols=59 Identities=17% Similarity=0.059 Sum_probs=41.8
Q ss_pred cccCHHHHHHHHHHHHHcCCCcEEEEEeccCCccccc-CChHHHHHHHHHhCcEEEeeccc
Q 046506 24 YGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAV-DTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 24 ~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~-~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
..++.+++++.++...+. ....-+++..+|-+.|.- +-..+|.++|++.|+.+++|.+.
T Consensus 109 p~is~~~~~~~l~~~~~~-l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 109 PEISEAELEQFLEQLKAL-LESDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred CCCCHHHHHHHHHHHHHh-cccCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECCh
Confidence 368888888888765541 112234555666666653 34889999999999999999874
No 407
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=54.61 E-value=38 Score=28.25 Aligned_cols=49 Identities=24% Similarity=0.187 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEE
Q 046506 29 DSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVH 78 (310)
Q Consensus 29 ~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~ 78 (310)
-+-|..++=..-.|..|..|++...+- .|.....+++.++|++||+.++
T Consensus 141 GHTEasVdLarlAGl~Pa~VicEi~~~-dG~mar~~~~~~fa~~h~l~~i 189 (203)
T COG0108 141 GHTEAAVDLARLAGLKPAGVICEIMND-DGTMARLPELEEFAKEHGLPVI 189 (203)
T ss_pred ChHHHHHHHHHHcCCCCcEEEEEEeCC-CccccChHHHHHHHHHcCCcEE
Confidence 344555554444577888888876665 7888999999999999999875
No 408
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=53.07 E-value=9.6 Score=37.14 Aligned_cols=29 Identities=38% Similarity=0.528 Sum_probs=25.2
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
...|+.++++++++.||++|+.+++|.+.
T Consensus 154 ~~~G~~~e~k~lV~~aH~~Gi~VilD~V~ 182 (542)
T TIGR02402 154 NAYGGPDDLKALVDAAHGLGLGVILDVVY 182 (542)
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 34577788999999999999999999874
No 409
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=52.96 E-value=38 Score=31.49 Aligned_cols=27 Identities=30% Similarity=0.379 Sum_probs=24.5
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeec
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
..-|.+.+++++.++||+.|+++.||=
T Consensus 152 Y~KG~L~~~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 152 YAKGVLTNVQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred cccccchhHHHHHHHHHHcCCcEEECC
Confidence 456899999999999999999999993
No 410
>PRK12313 glycogen branching enzyme; Provisional
Probab=52.44 E-value=10 Score=37.72 Aligned_cols=28 Identities=25% Similarity=0.146 Sum_probs=24.6
Q ss_pred cccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 56 AITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 56 ~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
..|+.++++++++.||++|+.|++|.+.
T Consensus 215 ~~Gt~~d~k~lv~~~H~~Gi~VilD~V~ 242 (633)
T PRK12313 215 RYGTPEDFMYLVDALHQNGIGVILDWVP 242 (633)
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 4577788999999999999999999763
No 411
>PLN03244 alpha-amylase; Provisional
Probab=51.22 E-value=11 Score=38.08 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=29.3
Q ss_pred EeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 50 ATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 50 ~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
.-..++-.|+.++++++++.||+.|+.|++|-++
T Consensus 430 fFApssRYGTPeDLK~LVD~aH~~GI~VILDvV~ 463 (872)
T PLN03244 430 FFAASSRYGTPDDFKRLVDEAHGLGLLVFLDIVH 463 (872)
T ss_pred ccccCcccCCHHHHHHHHHHHHHCCCEEEEEecC
Confidence 3455666788999999999999999999999876
No 412
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=51.18 E-value=77 Score=27.55 Aligned_cols=62 Identities=6% Similarity=0.065 Sum_probs=42.2
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccc----cCChHHHHHHHHHhCcEEEeeccccccc
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITA----VDTLKPLCDVAKQFGIWVHVDAAYAGSA 87 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~----~~pl~~I~~l~~~~g~~l~vD~a~~~~~ 87 (310)
-.++++++.++..-...+... ++++.-+++.... ..++..|..+.+.+++++++|-+|++|.
T Consensus 132 ~~t~~e~~~A~e~i~~~Gn~~-i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 132 MATIEEYLGALSYLQDTGKSN-IILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred CCCHHHHHHHHHHHHHcCCCe-EEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcc
Confidence 578899999988766555433 2322213322222 4668888888888999999999998664
No 413
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=50.96 E-value=1.1e+02 Score=26.81 Aligned_cols=61 Identities=15% Similarity=0.101 Sum_probs=42.9
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcc-cc---cCChHHHHHHHHHhCcEEEeecccccc
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAI-TA---VDTLKPLCDVAKQFGIWVHVDAAYAGS 86 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~-G~---~~pl~~I~~l~~~~g~~l~vD~a~~~~ 86 (310)
..++++++.++..-...+... ++++..+++.. +. ..++..|..+.+.+++++.+|..|+.|
T Consensus 142 ~~t~~e~~~Ave~i~~~Gn~~-i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 142 GNTIEEWLYAAEYILSSGNGN-VILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred CCCHHHHHHHHHHHHHcCCCc-EEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCC
Confidence 358899999998776555433 33333234332 43 467999999998899999999999766
No 414
>PRK05402 glycogen branching enzyme; Provisional
Probab=50.54 E-value=11 Score=38.15 Aligned_cols=29 Identities=24% Similarity=0.253 Sum_probs=25.1
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
...|+.++++++++.||++|+.|++|.+.
T Consensus 309 ~~~Gt~~dfk~lV~~~H~~Gi~VilD~V~ 337 (726)
T PRK05402 309 SRFGTPDDFRYFVDACHQAGIGVILDWVP 337 (726)
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 44577788999999999999999999863
No 415
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=49.74 E-value=54 Score=29.29 Aligned_cols=58 Identities=12% Similarity=0.059 Sum_probs=33.0
Q ss_pred CCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 22 SSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 22 ~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
.++.+|.+.+++.++...+.+..-..+.-+++....=+.++-.++.+.+.+. .+++++
T Consensus 21 ~dg~iD~~~l~~li~~l~~~Gv~Gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~ 81 (303)
T PRK03620 21 ADGSFDEAAYREHLEWLAPYGAAALFAAGGTGEFFSLTPDEYSQVVRAAVETTAGRVPVIA 81 (303)
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3459999999999998877665432222233322222233444566655543 355554
No 416
>PRK10785 maltodextrin glucosidase; Provisional
Probab=49.42 E-value=11 Score=37.13 Aligned_cols=55 Identities=16% Similarity=0.159 Sum_probs=37.5
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEe----------------ccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCAT----------------IGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~----------------~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
|++-+.++|.--++-|+..+ -+.. ......|+.++++++++.||++|+.|++|.+
T Consensus 177 Dl~GI~~kLdYL~~LGv~~I-~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V 247 (598)
T PRK10785 177 DLDGISEKLPYLKKLGVTAL-YLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGV 247 (598)
T ss_pred CHHHHHHHHHHHHHcCCCEE-EeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 67888888866555454321 1111 1122346667899999999999999999997
No 417
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=49.39 E-value=52 Score=28.92 Aligned_cols=51 Identities=18% Similarity=0.248 Sum_probs=32.3
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF 73 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~ 73 (310)
++.+|.+.+++.++...+.+....++..+.+....=+.++-+++.+.+.++
T Consensus 15 dg~iD~~~~~~~i~~l~~~Gv~gl~v~GstGE~~~lt~~Er~~l~~~~~~~ 65 (284)
T cd00950 15 DGSVDFDALERLIEFQIENGTDGLVVCGTTGESPTLSDEEHEAVIEAVVEA 65 (284)
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECCCCcchhhCCHHHHHHHHHHHHHH
Confidence 459999999999998877665543333333333333345556677766665
No 418
>PRK11633 cell division protein DedD; Provisional
Probab=49.27 E-value=1e+02 Score=26.40 Aligned_cols=50 Identities=12% Similarity=0.095 Sum_probs=36.1
Q ss_pred HHHHHHHHHhcCc-EEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 250 NRELLESINASGK-AYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 250 ~~~l~~~l~~~g~-~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
...+.++|...|. .|+.+....++.+.|+-+. ++.++++.+.....|+++
T Consensus 163 A~~l~~kL~~~G~~Ay~~~~~~~~G~~tRV~VG-P~~sk~~ae~~~~~Lk~~ 213 (226)
T PRK11633 163 VNEIVAKLRLSGYRVYTVPSTPVQGKITRIYVG-PDASKDKLKGSLGELKQL 213 (226)
T ss_pred HHHHHHHHHHCCCeeEEEeeecCCCcEEEEEeC-CCCCHHHHHHHHHHHHHh
Confidence 4678888988883 4554443333346677645 899999999999999885
No 419
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=48.68 E-value=59 Score=31.34 Aligned_cols=62 Identities=10% Similarity=0.096 Sum_probs=44.6
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh--CcEEEeecccc
Q 046506 12 NFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF--GIWVHVDAAYA 84 (310)
Q Consensus 12 ~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~--g~~l~vD~a~~ 84 (310)
.|..++..- ..++.+++.+.|.+.. |-+|.++.. +.......++++.+|+. ++.+++=|.|.
T Consensus 39 ~V~iiD~~~---~~~~~~~~~~~l~~~~-----pdvVgis~~---t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~ 102 (497)
T TIGR02026 39 DVTFLDAMT---GPLTDEKLVERLRAHC-----PDLVLITAI---TPAIYIACETLKFARERLPNAIIVLGGIHP 102 (497)
T ss_pred ceEEecccc---cCCCHHHHHHHHHhcC-----cCEEEEecC---cccHHHHHHHHHHHHHHCCCCEEEEcCCCc
Confidence 488887653 2578889988887642 546666543 33455677899999987 89999888874
No 420
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=48.68 E-value=48 Score=27.59 Aligned_cols=64 Identities=16% Similarity=0.104 Sum_probs=41.9
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEE
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVH 78 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~ 78 (310)
|.++-..++| -.-...+-|..++=..-.+..|..+++...+- .|.....+++.++|++||++++
T Consensus 122 v~Pl~a~~gG-vl~R~GhtEaavdLa~lAGl~p~avi~eil~~-dG~~~~~~~~~~fA~~~~l~~v 185 (194)
T PF00926_consen 122 VFPLRARPGG-VLERRGHTEAAVDLARLAGLSPVAVICEILDD-DGDMARRDELEEFAKKHGLPIV 185 (194)
T ss_dssp EEEEEE-TTG-GGTSSSHHHHHHHHHHHTTS-SBEEEEEBBET-TSSBHCHHHHHHHHHHTT-EEE
T ss_pred CccceecCCc-ccCCCChHHHHHHHHHHhCCCCcEEEEEEeCC-CCCcCCHHHHHHHHHHcCCcEE
Confidence 4444445432 12334555666655555677788787777755 8999999999999999999875
No 421
>PLN00196 alpha-amylase; Provisional
Probab=48.44 E-value=12 Score=35.37 Aligned_cols=28 Identities=21% Similarity=0.197 Sum_probs=25.0
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+..|+.++++++++.||++|+.+++|.+
T Consensus 86 ~~fGt~~elk~Lv~~aH~~GIkVilDvV 113 (428)
T PLN00196 86 SKYGNEAQLKSLIEAFHGKGVQVIADIV 113 (428)
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3467788899999999999999999987
No 422
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=48.41 E-value=18 Score=31.35 Aligned_cols=26 Identities=19% Similarity=0.213 Sum_probs=22.8
Q ss_pred cccCChHHHHHHHHHhCcEEEeeccc
Q 046506 58 TAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 58 G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
|..-+.+++.++|+++++-++||++|
T Consensus 50 G~lg~~~~l~~~l~~~~i~~vIDATH 75 (249)
T PF02571_consen 50 GRLGDEEGLAEFLRENGIDAVIDATH 75 (249)
T ss_pred CCCCCHHHHHHHHHhCCCcEEEECCC
Confidence 44436889999999999999999999
No 423
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=46.65 E-value=56 Score=29.30 Aligned_cols=55 Identities=13% Similarity=0.111 Sum_probs=34.6
Q ss_pred cccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEE
Q 046506 24 YGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVH 78 (310)
Q Consensus 24 ~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~ 78 (310)
+.+|.+.+++.++...+.+..-..++-+++....=+.++-+++.+.+.+. .++++
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~Gi~v~GstGE~~~Lt~eEr~~v~~~~~~~~~grvpvi 81 (309)
T cd00952 24 DTVDLDETARLVERLIAAGVDGILTMGTFGECATLTWEEKQAFVATVVETVAGRVPVF 81 (309)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECcccccchhCCHHHHHHHHHHHHHHhCCCCCEE
Confidence 68999999999999888775543333444433333345555666655553 25555
No 424
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=45.97 E-value=99 Score=28.38 Aligned_cols=62 Identities=10% Similarity=0.017 Sum_probs=42.6
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEecc----C-CcccccCChHHHHHHHHHhCcEEEeeccccccc
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIG----T-TAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSA 87 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~----~-~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~ 87 (310)
..+++++..++..-...+... ++.+.-+ . +.+-...++..|..+-+.+++++++|.+|+.|.
T Consensus 218 ~~t~ee~~~A~e~i~~~Gn~~-viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 218 AATIDEWLMAAEYILAAGNPN-VILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGK 284 (352)
T ss_pred CCCHHHHHHHHHHHHHcCCCe-EEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCc
Confidence 458899998887765555433 3333221 1 222345679999999777899999999998764
No 425
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=45.79 E-value=20 Score=31.06 Aligned_cols=26 Identities=19% Similarity=0.170 Sum_probs=22.8
Q ss_pred cccCChHHHHHHHHHhCcEEEeeccc
Q 046506 58 TAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 58 G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
|...+.+.+.++++++++-++||++|
T Consensus 49 G~l~~~~~l~~~l~~~~i~~VIDATH 74 (248)
T PRK08057 49 GGFGGAEGLAAYLREEGIDLVIDATH 74 (248)
T ss_pred CCCCCHHHHHHHHHHCCCCEEEECCC
Confidence 44446799999999999999999999
No 426
>PF03796 DnaB_C: DnaB-like helicase C terminal domain; InterPro: IPR007694 The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis. ; GO: 0003678 DNA helicase activity, 0005524 ATP binding, 0006260 DNA replication; PDB: 1Q57_E 1E0K_D 1E0J_B 1CR2_A 1CR4_A 1CR1_A 1CR0_A 1MI8_A 2R6D_B 2R6C_C ....
Probab=45.63 E-value=1.3e+02 Score=25.96 Aligned_cols=57 Identities=18% Similarity=0.068 Sum_probs=36.7
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCccc---ccCC-------hHHHHHHHHHhCcEEEeec
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAIT---AVDT-------LKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G---~~~p-------l~~I~~l~~~~g~~l~vD~ 81 (310)
.++++++++.++..........+|++.+..-... .-.. .++|.++|+++|+++++=.
T Consensus 111 ~~~~~~i~~~i~~~~~~~~~~~~v~IDyl~ll~~~~~~~~~~~~~~~i~~~Lk~lA~~~~i~vi~~s 177 (259)
T PF03796_consen 111 SLTIDDIESKIRRLKREGKKVDVVFIDYLQLLKSEDSSDNRRQEIGEISRELKALAKELNIPVIALS 177 (259)
T ss_dssp S-BHHHHHHHHHHHHHHSTTEEEEEEEEGGGSBTSCSSSCCHHHHHHHHHHHHHHHHHHTSEEEEEE
T ss_pred CCCHHHHHHHHHHHHhhccCCCEEEechHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHcCCeEEEcc
Confidence 5789999999987766532344677766543222 1112 3457789999999988643
No 427
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=45.18 E-value=15 Score=36.39 Aligned_cols=28 Identities=25% Similarity=0.196 Sum_probs=24.4
Q ss_pred cccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 56 AITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 56 ~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
..|+.++++++++.||++|+.|++|.+.
T Consensus 201 ~~Gt~~dlk~lV~~~H~~Gi~VilD~V~ 228 (613)
T TIGR01515 201 RFGTPDDFMYFVDACHQAGIGVILDWVP 228 (613)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 3466778999999999999999999874
No 428
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=45.00 E-value=1e+02 Score=28.40 Aligned_cols=60 Identities=8% Similarity=0.030 Sum_probs=42.4
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccc----cCChHHHHHHHHHhCcEEEeecccccc
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITA----VDTLKPLCDVAKQFGIWVHVDAAYAGS 86 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~----~~pl~~I~~l~~~~g~~l~vD~a~~~~ 86 (310)
.++++++.++..-...|... ++++..|.+...+ -.++..|..+-+++++++.+|..|+.|
T Consensus 236 ~t~~e~~~Ave~i~~~Gn~~-i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 236 ATIEEFIYAAEYIMSQGNGQ-IILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTG 299 (360)
T ss_pred CCHHHHHHHHHHHHHCCCCC-EEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCc
Confidence 68999999998766555433 3333324433221 247999999999999999999999866
No 429
>PF07131 DUF1382: Protein of unknown function (DUF1382); InterPro: IPR009814 This entry is represented by Bacteriophage lambda, Xis. This entry overlaps with IPR009750, both representing lambda Xis. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical Escherichia coli and Bacteriophage lambda-like proteins of around 60 residues in length. The function of this family is unknown.
Probab=44.19 E-value=56 Score=21.33 Aligned_cols=29 Identities=17% Similarity=0.278 Sum_probs=23.8
Q ss_pred EEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 276 IRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 276 iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
|||+.+ |-++++|...|-+.+.+-+..|+
T Consensus 24 IRFVpi-Pv~~dee~~~L~s~~~~kLe~ma 52 (61)
T PF07131_consen 24 IRFVPI-PVVTDEEFHTLSSQLSQKLERMA 52 (61)
T ss_pred ceeecc-ccccHHHHHHHHHHHHHHHHHHH
Confidence 488866 78999999999998888777663
No 430
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=44.08 E-value=1.2e+02 Score=25.32 Aligned_cols=64 Identities=13% Similarity=0.061 Sum_probs=43.1
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEE
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVH 78 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~ 78 (310)
|.++-..++| -.-..-+-|..++=..-.+..|..+++...+- .|.....+++.++|++||++++
T Consensus 127 vfPL~a~~gG-vl~R~GhTEaavdL~~lAGl~p~~vicEil~~-dG~m~~~~~~~~fA~~~~l~~i 190 (199)
T TIGR00506 127 VFPLRAADGG-VLTRGGHTEASVDLAELAGLKPAGVICEMMND-DGTMARKPELMEYAKKHNLKLI 190 (199)
T ss_pred cceEEeccCC-CcCCCChHHHHHHHHHHcCCCceEEEEEEeCC-CCCccCHHHHHHHHHHcCCcEE
Confidence 4445554432 12334455666655444566787777777544 7999999999999999999883
No 431
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=43.90 E-value=43 Score=25.00 Aligned_cols=50 Identities=16% Similarity=0.094 Sum_probs=37.0
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEee
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD 80 (310)
..++++++|++.+.+... .+++ ++-..|.+.=.++-.+++++.++-+.+-
T Consensus 46 SHkl~~eEle~~lee~~E------~ivv--GTG~~G~l~l~~ea~e~~r~k~~~vi~~ 95 (121)
T COG1504 46 SHKLALEELEELLEEGPE------VIVV--GTGQSGMLELSEEAREFFRKKGCEVIEL 95 (121)
T ss_pred ccccCHHHHHHHHhcCCc------EEEE--ecCceeEEEeCHHHHHHHHhcCCeEEEe
Confidence 468999999999987643 3333 3335577777788999999999877754
No 432
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=43.46 E-value=39 Score=29.81 Aligned_cols=57 Identities=19% Similarity=0.160 Sum_probs=33.1
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
++.+|.+.+++.++...+.+....++..+++....=+.++-.++.+++.++ .+++++
T Consensus 16 dg~id~~~~~~~i~~l~~~Gv~gl~~~GstGE~~~Lt~~Er~~l~~~~~~~~~~~~~vi~ 75 (289)
T PF00701_consen 16 DGSIDEDALKRLIDFLIEAGVDGLVVLGSTGEFYSLTDEERKELLEIVVEAAAGRVPVIA 75 (289)
T ss_dssp TSSB-HHHHHHHHHHHHHTTSSEEEESSTTTTGGGS-HHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CcCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHccCceEEEe
Confidence 459999999999998887775433222233322222234455566666653 466665
No 433
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=43.35 E-value=24 Score=27.08 Aligned_cols=48 Identities=15% Similarity=0.213 Sum_probs=27.3
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEee
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD 80 (310)
.++.+.-++.+++--..+ .| +++++.+. .|-+++.++|++++++++.=
T Consensus 64 ~l~~~~r~~~l~~l~~~~-~P-~iIvt~~~------~~p~~l~e~a~~~~ipll~t 111 (127)
T PF02603_consen 64 SLDEEERKERLEKLFSYN-PP-CIIVTRGL------EPPPELIELAEKYNIPLLRT 111 (127)
T ss_dssp CS-HHHHCCHHHHHCTTT--S--EEEETTT---------HHHHHHHHHCT--EEEE
T ss_pred HCCHHHHHHHHHHHhCCC-CC-EEEEECcC------CCCHHHHHHHHHhCCcEEEc
Confidence 467777667776643322 34 56665443 67899999999999998754
No 434
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=42.81 E-value=17 Score=35.47 Aligned_cols=57 Identities=14% Similarity=0.128 Sum_probs=37.6
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEe--------c---------cCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCAT--------I---------GTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~--------~---------~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
.=|+..+.+.|.--.+-|+..+ .+.. + .....|+.++++++++.||++|+.+++|.+
T Consensus 29 ~Gdl~gi~~~ldyl~~lGv~~i-~l~P~~~~~~~~~gY~~~d~~~id~~~Gt~~d~~~lv~~~h~~gi~vilD~V 102 (551)
T PRK10933 29 TGDLRGVTQRLDYLQKLGVDAI-WLTPFYVSPQVDNGYDVANYTAIDPTYGTLDDFDELVAQAKSRGIRIILDMV 102 (551)
T ss_pred CcCHHHHHHhhHHHHhCCCCEE-EECCCCCCCCCCCCCCcccCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3467777777766555454321 1111 1 122346667799999999999999999986
No 435
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=41.11 E-value=19 Score=35.20 Aligned_cols=59 Identities=12% Similarity=0.063 Sum_probs=39.1
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEe-----------------ccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCAT-----------------IGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~-----------------~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++.=|+..+.++|.--.+-|+..+ .... ......|+.++++++++.||++|+.+++|.+
T Consensus 21 ~~~G~~~gi~~~l~yl~~lG~~~i-~l~Pi~~~~~~~~gY~~~d~~~id~~~Gt~~~~~~lv~~ah~~gi~vilD~v 96 (543)
T TIGR02403 21 DGTGDLRGIIEKLDYLKKLGVDYI-WLNPFYVSPQKDNGYDVSDYYAINPLFGTMADFEELVSEAKKRNIKIMLDMV 96 (543)
T ss_pred CCccCHHHHHHhHHHHHHcCCCEE-EECCcccCCCCCCCCCccccCccCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 335578888888865555443321 1111 1112346677899999999999999999986
No 436
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=40.93 E-value=99 Score=26.14 Aligned_cols=54 Identities=9% Similarity=-0.021 Sum_probs=33.9
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcc-cc--cCC-------hHHHHHHHHHhCcEEEe
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAI-TA--VDT-------LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~-G~--~~p-------l~~I~~l~~~~g~~l~v 79 (310)
.+++++|++.|....... .+.+|++.+.+... +. -++ ++.|.++|+++|+.+++
T Consensus 105 ~~~~~~l~~~i~~~~~~~-~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 105 SLTVSDIRSRARRLKKEH-GLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CCCHHHHHHHHHHHHHhc-CCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 478888888887654432 35577777665432 11 111 45677788889987665
No 437
>PLN02361 alpha-amylase
Probab=40.89 E-value=19 Score=33.63 Aligned_cols=28 Identities=25% Similarity=0.283 Sum_probs=25.0
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+-.|+.++++++.+.||++|+.+++|.+
T Consensus 70 ~~~Gt~~el~~li~~~h~~gi~vi~D~V 97 (401)
T PLN02361 70 SAYGSEHLLKSLLRKMKQYNVRAMADIV 97 (401)
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEEEEc
Confidence 3458888999999999999999999986
No 438
>PRK09505 malS alpha-amylase; Reviewed
Probab=40.54 E-value=20 Score=36.06 Aligned_cols=26 Identities=31% Similarity=0.400 Sum_probs=23.6
Q ss_pred ccccCChHHHHHHHHHhCcEEEeecc
Q 046506 57 ITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 57 ~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
.|+.++++++++.||++|+.+++|.+
T Consensus 288 ~Gt~~dfk~Lv~~aH~~Gi~VilD~V 313 (683)
T PRK09505 288 MGTEADLRTLVDEAHQRGIRILFDVV 313 (683)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 56677899999999999999999986
No 439
>PRK00945 acetyl-CoA decarbonylase/synthase complex subunit epsilon; Provisional
Probab=40.17 E-value=83 Score=25.62 Aligned_cols=51 Identities=20% Similarity=0.216 Sum_probs=34.7
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
.+.|+.+.+.|.+.++ |.+++-..... .-.-.+++.+++++.+++++.-.-
T Consensus 21 ~~~p~~aa~lI~~AKr----PlIivG~ga~~---~~ea~e~l~elaEkl~iPVvtT~~ 71 (171)
T PRK00945 21 IVSPKIAAMMIKKAKR----PLLVVGSLLLD---DEELLDRAVKIAKKANIPVAATGG 71 (171)
T ss_pred ccCHHHHHHHHHhCCC----cEEEECcCccc---cchHHHHHHHHHHHHCCCEEEccc
Confidence 5789999999987754 64443332221 112377899999999999886653
No 440
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=39.94 E-value=92 Score=27.49 Aligned_cols=58 Identities=16% Similarity=0.254 Sum_probs=32.9
Q ss_pred CCcccCHHHHHHHHHHHHHc-CCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 22 SSYGLSPDSLMAKINSDVEA-GLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 22 ~~~~id~~~Le~~i~~~~~~-~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
.++.+|.+.+++.++...+. +..-.+++.+.+....=+.++-.++.+.+.+. .+.+++
T Consensus 14 ~dg~iD~~~~~~~i~~l~~~~Gv~gi~~~GstGE~~~Lt~~Er~~~~~~~~~~~~~~~~via 75 (288)
T cd00954 14 ENGEINEDVLRAIVDYLIEKQGVDGLYVNGSTGEGFLLSVEERKQIAEIVAEAAKGKVTLIA 75 (288)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCeEEe
Confidence 34599999999999988776 65433333333322222233344455555553 355554
No 441
>COG1387 HIS2 Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only]
Probab=39.92 E-value=52 Score=28.25 Aligned_cols=53 Identities=11% Similarity=0.130 Sum_probs=34.1
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEee-cccccc
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVD-AAYAGS 86 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD-~a~~~~ 86 (310)
..+.+.+-+++.++ .+++..+++ .|.++|-.++..+|+++|+++.+. .||...
T Consensus 146 ~~~~~~~~~~~~~~--------g~aleins~-~~~~~~~~~~~~~~~e~G~~~~i~tDaH~~~ 199 (237)
T COG1387 146 KEDIEELIELAEKN--------GKALEINSR-PGRLDPNSEILRLARELGVKLAIGTDAHRPG 199 (237)
T ss_pred HHHHHHHHHHHHHh--------CcEEeecCC-cCccCchHHHHHHHHHhCCeEEeecCcCChh
Confidence 44555555555554 244444444 688888999999999998877654 456433
No 442
>cd04736 MDH_FMN Mandelate dehydrogenase (MDH)-like FMN-binding domain. MDH is part of a widespread family of homologous FMN-dependent a-hydroxy acid oxidizing enzymes that oxidizes (S)-mandelate to phenylglyoxalate. MDH is an enzyme in the mandelate pathway that occurs in several strains of Pseudomonas which converts (R)-mandelate to benzoate. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate dehydrogenase (MDH), and long chain hydroxyacid oxidase (LCHAO).
Probab=39.57 E-value=43 Score=30.83 Aligned_cols=28 Identities=14% Similarity=0.145 Sum_probs=19.7
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
...+...+++.+.++++..++.+++||-
T Consensus 270 qld~~~~~~~~L~ei~~~~~~~vi~dGG 297 (361)
T cd04736 270 QLDDAIAPIEALAEIVAATYKPVLIDSG 297 (361)
T ss_pred CCcCCccHHHHHHHHHHHhCCeEEEeCC
Confidence 3445556677888877777788888865
No 443
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=39.41 E-value=70 Score=28.25 Aligned_cols=57 Identities=11% Similarity=0.068 Sum_probs=33.5
Q ss_pred EEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh
Q 046506 15 AIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF 73 (310)
Q Consensus 15 ~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~ 73 (310)
..|-++ ++.+|.+.+++.++...+.+.....++.+.+....=+.++-.++.+.+.+.
T Consensus 10 ~TPf~~--dg~iD~~~l~~~i~~l~~~Gv~gi~~~Gs~GE~~~ls~~Er~~~~~~~~~~ 66 (292)
T PRK03170 10 VTPFKE--DGSVDFAALRKLVDYLIANGTDGLVVVGTTGESPTLTHEEHEELIRAVVEA 66 (292)
T ss_pred eCCcCC--CCCcCHHHHHHHHHHHHHcCCCEEEECCcCCccccCCHHHHHHHHHHHHHH
Confidence 334444 459999999999999887776543333333332222234444566655553
No 444
>PLN02447 1,4-alpha-glucan-branching enzyme
Probab=39.22 E-value=22 Score=36.07 Aligned_cols=28 Identities=29% Similarity=0.321 Sum_probs=24.8
Q ss_pred cccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 56 AITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 56 ~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
..|+.++++++++.||++|+.|++|-++
T Consensus 295 ~~Gtp~dlk~LVd~aH~~GI~VilDvV~ 322 (758)
T PLN02447 295 RSGTPEDLKYLIDKAHSLGLRVLMDVVH 322 (758)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 4577788999999999999999999875
No 445
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=38.32 E-value=89 Score=27.53 Aligned_cols=58 Identities=12% Similarity=0.139 Sum_probs=34.3
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh
Q 046506 14 RAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF 73 (310)
Q Consensus 14 ~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~ 73 (310)
...|.+++ +.+|.+.+++.++...+.+.....+..+.+....=+.++-+++.+.+.+.
T Consensus 6 ~~TPf~~~--g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~Ls~~Er~~~~~~~~~~ 63 (285)
T TIGR00674 6 LITPFKED--GSVDFAALEKLIDFQIENGTDAIVVVGTTGESPTLSHEEHKKVIEFVVDL 63 (285)
T ss_pred eeCCcCCC--CCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHHH
Confidence 34555654 49999999999998777675543333333333222234444566655554
No 446
>TIGR02456 treS_nterm trehalose synthase. Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530).
Probab=38.30 E-value=21 Score=34.85 Aligned_cols=27 Identities=26% Similarity=0.404 Sum_probs=23.8
Q ss_pred ccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 57 ITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 57 ~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
.|+.++++++++-||++|+.+++|.+.
T Consensus 72 ~Gt~~df~~Lv~~ah~~Gi~vilD~V~ 98 (539)
T TIGR02456 72 FGTIDDFKDFVDEAHARGMRVIIDLVL 98 (539)
T ss_pred hCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 466778999999999999999999863
No 447
>PLN02417 dihydrodipicolinate synthase
Probab=38.28 E-value=77 Score=27.92 Aligned_cols=56 Identities=18% Similarity=0.128 Sum_probs=33.8
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEE
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVH 78 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~ 78 (310)
++.+|.+.+++.++...+.+..-..++-+.+....=+.++-.++.+.+.+. .++++
T Consensus 16 ~g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~ls~~Er~~~~~~~~~~~~~~~pvi 74 (280)
T PLN02417 16 DGRFDLEAYDSLVNMQIENGAEGLIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGKIKVI 74 (280)
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccCcchhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 459999999999998877775543333344433333344455566655543 25555
No 448
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=36.12 E-value=98 Score=27.45 Aligned_cols=51 Identities=14% Similarity=0.114 Sum_probs=31.5
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF 73 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~ 73 (310)
++.+|.+.+++.++...+.+..-..+.-+.+....=+.++-+++.+.+.+.
T Consensus 20 dg~iD~~~l~~li~~l~~~Gv~gi~v~GstGE~~~Lt~eEr~~v~~~~~~~ 70 (296)
T TIGR03249 20 DGSFDEAAYRENIEWLLGYGLEALFAAGGTGEFFSLTPAEYEQVVEIAVST 70 (296)
T ss_pred CCCcCHHHHHHHHHHHHhcCCCEEEECCCCcCcccCCHHHHHHHHHHHHHH
Confidence 459999999999999887775533333333333333334455566655553
No 449
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=35.99 E-value=2.1e+02 Score=25.01 Aligned_cols=57 Identities=23% Similarity=0.201 Sum_probs=39.7
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccc---cCChHHHHHHHHHhCcEEEeecccc
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITA---VDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~---~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
.+++++..-++..-...+..- ++.+.=+.|. |. ..|+..|.-+ ++.+.++++|.+|+
T Consensus 126 ~~t~~e~l~aaeyi~~~Gn~~-viLcERG~tf-~y~r~~~D~~~ip~~-k~~~~PVi~DpSHs 185 (258)
T TIGR01362 126 FLSPWDMKNVVEKVLSTGNKN-ILLCERGTSF-GYNNLVVDMRSLPIM-RELGCPVIFDATHS 185 (258)
T ss_pred cCCHHHHHHHHHHHHHcCCCc-EEEEeCCCCc-CCCCcccchhhhHHH-HhcCCCEEEeCCcc
Confidence 688998888877655555433 4555555543 44 5678888766 44589999999996
No 450
>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family. Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.
Probab=35.93 E-value=35 Score=27.85 Aligned_cols=30 Identities=27% Similarity=0.369 Sum_probs=24.7
Q ss_pred ccccCChHHHHHHHHHhC--cEEEeecccccc
Q 046506 57 ITAVDTLKPLCDVAKQFG--IWVHVDAAYAGS 86 (310)
Q Consensus 57 ~G~~~pl~~I~~l~~~~g--~~l~vD~a~~~~ 86 (310)
.|.+..++++.+.+|++| +.+|+|-..|.+
T Consensus 27 ~g~I~~l~~~v~~~~~~gK~vfVHiDli~Gl~ 58 (175)
T PF04309_consen 27 TGDIGNLKDIVKRLKAAGKKVFVHIDLIEGLS 58 (175)
T ss_dssp SEECCCHHHHHHHHHHTT-EEEEECCGEETB-
T ss_pred cCcHHHHHHHHHHHHHcCCEEEEEehhcCCCC
Confidence 477889999999999998 788999776544
No 451
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=35.93 E-value=34 Score=18.66 Aligned_cols=19 Identities=5% Similarity=0.081 Sum_probs=14.2
Q ss_pred CCCCCcccCHHHHHHHHHH
Q 046506 19 TKSSSYGLSPDSLMAKINS 37 (310)
Q Consensus 19 ~~~~~~~id~~~Le~~i~~ 37 (310)
|.+++|.|+.+++.+.+.+
T Consensus 10 D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 10 DKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp STTSSSEEEHHHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHh
Confidence 3445679999999888764
No 452
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=35.72 E-value=92 Score=27.60 Aligned_cols=56 Identities=14% Similarity=0.186 Sum_probs=31.2
Q ss_pred CcccCHHHHHHHHHHHHHcC-CCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEE
Q 046506 23 SYGLSPDSLMAKINSDVEAG-LIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVH 78 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~-~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~ 78 (310)
++.+|.+.+++.++...+.+ ..-..+.-+.+....=+.++-+++.+.+.+. .++++
T Consensus 15 dg~iD~~~~~~~i~~~i~~G~v~gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi 74 (290)
T TIGR00683 15 DGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALI 74 (290)
T ss_pred CCCcCHHHHHHHHHHHHhCCCcCEEEECCcccccccCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 45999999999999877765 4432222232322222233444555555553 25554
No 453
>PLN02905 beta-amylase
Probab=35.61 E-value=4.6e+02 Score=26.17 Aligned_cols=55 Identities=15% Similarity=0.155 Sum_probs=31.1
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccc--c---CChHHHHHHHHHhCcEEEe
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITA--V---DTLKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~--~---~pl~~I~~l~~~~g~~l~v 79 (310)
..+++.|+..|..-+..++--+.|=+-++-.+.-. . .--++++++|++.|+.+++
T Consensus 282 l~~~~al~a~L~aLK~aGVdGVmvDVWWGiVE~~gP~~YdWsgY~~L~~mvr~~GLKlqv 341 (702)
T PLN02905 282 LADPDGLLKQLRILKSINVDGVKVDCWWGIVEAHAPQEYNWNGYKRLFQMVRELKLKLQV 341 (702)
T ss_pred ccCHHHHHHHHHHHHHcCCCEEEEeeeeeeeecCCCCcCCcHHHHHHHHHHHHcCCeEEE
Confidence 46778888888777665543333322222221100 0 1156788888888877763
No 454
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=34.58 E-value=1.2e+02 Score=25.91 Aligned_cols=51 Identities=16% Similarity=0.040 Sum_probs=35.3
Q ss_pred HHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 31 LMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 31 Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
-|..++=..-.+..|..+++... +..|.....+++.++|++||+.+ ++...
T Consensus 159 TEAavdLa~lAGl~P~~vicEil-~~dG~ma~~~~l~~fA~~~~l~i-isi~d 209 (230)
T PRK00014 159 TEGSVDLAALAGLRPAGVLCELM-NADGTMMRGASLERYAAKEGLVA-LAIDE 209 (230)
T ss_pred cHHHHHHHHHcCCCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCcE-EEHHH
Confidence 34444433334556777777664 34588999999999999999988 55543
No 455
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=34.41 E-value=1.4e+02 Score=26.82 Aligned_cols=52 Identities=21% Similarity=0.279 Sum_probs=33.6
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEE-ecc------------CCccc------ccCChHHHHHHHHHhCcEEE
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCA-TIG------------TTAIT------AVDTLKPLCDVAKQFGIWVH 78 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~-~~~------------~~~~G------~~~pl~~I~~l~~~~g~~l~ 78 (310)
+.+.+++.|+.-...+...+++-+ ..+ ...+| ..|||+.+.+.||++|+-+|
T Consensus 17 ~~~~~~~~l~~l~~~~~N~V~~qVr~~gda~Y~S~~~p~s~~~~g~~~~~pg~DpL~~~I~eaHkrGlevH 87 (311)
T PF02638_consen 17 SKEQIDEMLDDLKSAGFNAVFVQVRPRGDALYPSDIEPWSGYLTGKQGKDPGFDPLEFMIEEAHKRGLEVH 87 (311)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEEEeCcEEEecccccccccccCCCCCCCCCccHHHHHHHHHHHcCCEEE
Confidence 678888888877666644322111 111 01112 26899999999999999888
No 456
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=34.11 E-value=84 Score=24.30 Aligned_cols=21 Identities=24% Similarity=0.212 Sum_probs=17.3
Q ss_pred cCChHHHHHHHHHhCcEEEee
Q 046506 60 VDTLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 60 ~~pl~~I~~l~~~~g~~l~vD 80 (310)
.+.+.++.+.||+.|+.+.+=
T Consensus 43 ~Dllge~v~a~h~~Girv~ay 63 (132)
T PF14871_consen 43 RDLLGEQVEACHERGIRVPAY 63 (132)
T ss_pred cCHHHHHHHHHHHCCCEEEEE
Confidence 466899999999999887643
No 457
>PLN00197 beta-amylase; Provisional
Probab=34.10 E-value=4.6e+02 Score=25.68 Aligned_cols=55 Identities=18% Similarity=0.205 Sum_probs=33.6
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccc--c---CChHHHHHHHHHhCcEEEe
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITA--V---DTLKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~--~---~pl~~I~~l~~~~g~~l~v 79 (310)
..+++.|+..|+.-+..++--+.|=+-++-.+.-. . .--+++.++|++.|+.+++
T Consensus 123 l~~~~~l~~~L~~LK~~GVdGVmvDvWWGiVE~~~p~~YdWsgY~~L~~mvr~~GLKlq~ 182 (573)
T PLN00197 123 VNRRKAMKASLQALKSAGVEGIMMDVWWGLVERESPGVYNWGGYNELLEMAKRHGLKVQA 182 (573)
T ss_pred ccCHHHHHHHHHHHHHcCCCEEEEeeeeeeeccCCCCcCCcHHHHHHHHHHHHcCCeEEE
Confidence 56888899999887766644333333332222100 0 1167899999999988774
No 458
>PRK00685 metal-dependent hydrolase; Provisional
Probab=33.91 E-value=1.6e+02 Score=24.48 Aligned_cols=53 Identities=6% Similarity=0.041 Sum_probs=27.5
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHH
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQ 72 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~ 72 (310)
+..+|+. +.+.+++++..+..+.-. |..++.+|-.+......+.+++.+.+++
T Consensus 160 ~~~~~~~--~~~h~~~~ea~~~~~~~~-----~k~~v~~H~~~~~~~~~~~~~~~~~~~~ 212 (228)
T PRK00685 160 VALLPIG--DNFTMGPEDAALAVELIK-----PKIVIPMHYNTFPLIEQDPEKFKALVEG 212 (228)
T ss_pred EEEEecC--CccccCHHHHHHHHHhhC-----CCEEEEeccCCCcCCcCCHHHHHHHHHh
Confidence 4455543 234566666655544321 4456666655443334456666666665
No 459
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown though a number are annotated as outer surface proteins.; PDB: 2P0O_A 1X7F_A.
Probab=33.90 E-value=48 Score=30.48 Aligned_cols=58 Identities=24% Similarity=0.255 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccC-CcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGT-TAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~-~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
+.++.++.|.+..+.|...+..++..+. ...-.+..+++|.+.|+++|+.+++|-+..
T Consensus 12 ~~~~~~~yi~~a~~~Gf~~iFTSL~ipe~~~~~~~~~~~~l~~~a~~~~~~v~~Disp~ 70 (357)
T PF05913_consen 12 SFEENKAYIEKAAKYGFKRIFTSLHIPEDDPEDYLERLKELLKLAKELGMEVIADISPK 70 (357)
T ss_dssp -HHHHHHHHHHHHCTTEEEEEEEE---------HHHHHHHHHHHHHHCT-EEEEEE-CC
T ss_pred CHHHHHHHHHHHHHCCCCEEECCCCcCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHH
Confidence 5688888888877666443222222221 112335668899999999999999997654
No 460
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=33.70 E-value=2.1e+02 Score=24.27 Aligned_cols=66 Identities=15% Similarity=0.108 Sum_probs=43.6
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeec
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
|.++-..++| -.-...+-|..++=..-.+..|..+++... +..|.....+++.++|++||+++ ++.
T Consensus 137 vfPL~a~~gG-vl~R~GHTEaavdLa~lAGl~p~~vicEil-~~dG~ma~~~~~~~fA~~~~l~~-isi 202 (214)
T PRK01792 137 VFPLRAANGG-VLTRRGHTEAAVDLARLAGYKEAGVICEIT-NDDGTMARTPEIVEFAKKFGYAV-VTI 202 (214)
T ss_pred cceEEeccCC-CccCCChHHHHHHHHHHcCCCceEEEEEEe-cCCCCccCHHHHHHHHHHcCCcE-EEH
Confidence 4444444432 123344556666544445666877777765 45699999999999999999998 444
No 461
>smart00839 ELFV_dehydrog Glutamate/Leucine/Phenylalanine/Valine dehydrogenase. Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related. They contain a Gly-rich region containing a conserved Lys residue, which has been implicated in the catalytic activity, in each case a reversible oxidative deamination reaction.
Probab=33.67 E-value=1.2e+02 Score=22.10 Aligned_cols=53 Identities=13% Similarity=0.082 Sum_probs=30.9
Q ss_pred HHHHHHhcCcEEEEEeEECCEeEEEEEccCCCC---CHHHHH-HHHHHHHHHHHHHh
Q 046506 253 LLESINASGKAYMTHAVLGGIYAIRFAAGATLT---EERHVM-VAWTVVQEHLEALL 305 (310)
Q Consensus 253 l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~---t~edi~-~li~~l~~~~~~~~ 305 (310)
-.+.|.++|..+++-...+.++.+..++--..+ +++++. ++.+.|.+...++.
T Consensus 40 a~~~L~~rGi~~~PD~~~NaGGvi~s~~E~~~~~~~~~e~v~~~~~~~i~~~~~~v~ 96 (102)
T smart00839 40 ADDILEDRGVLYAPDFAANAGGVIVSALEMLQNLARTAEEVFTDLSEIMRNALEEIF 96 (102)
T ss_pred HHHHHHHCCCEEcCcceecCCCEEeehhhhhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 455677788766654444444444433221122 666666 88888888777654
No 462
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=33.53 E-value=72 Score=27.93 Aligned_cols=60 Identities=20% Similarity=0.152 Sum_probs=35.5
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCccccc---CChHHHHHHHHHh---CcEEE
Q 046506 14 RAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAV---DTLKPLCDVAKQF---GIWVH 78 (310)
Q Consensus 14 ~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~---~pl~~I~~l~~~~---g~~l~ 78 (310)
...|-+++ +.+|.+.+++.++...+.+..- + +..+++.-+.. ++-+++.+.+.+. .+.++
T Consensus 5 ~~TPf~~d--g~iD~~~~~~~i~~l~~~Gv~g--i-~~~GstGE~~~ls~~Er~~l~~~~~~~~~~~~~vi 70 (281)
T cd00408 5 LVTPFTAD--GEVDLDALRRLVEFLIEAGVDG--L-VVLGTTGEAPTLTDEERKEVIEAVVEAVAGRVPVI 70 (281)
T ss_pred eeCCcCCC--CCcCHHHHHHHHHHHHHcCCCE--E-EECCCCcccccCCHHHHHHHHHHHHHHhCCCCeEE
Confidence 34556654 4999999999999887766543 2 23334333443 3344566555553 35554
No 463
>COG0648 Nfo Endonuclease IV [DNA replication, recombination, and repair]
Probab=33.21 E-value=1.1e+02 Score=27.01 Aligned_cols=56 Identities=21% Similarity=0.302 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHH-cCCCcEEEEEeccC-Ccccc-cCChHHHHHHHHHhC-cEEEeecccc
Q 046506 28 PDSLMAKINSDVE-AGLIPLFLCATIGT-TAITA-VDTLKPLCDVAKQFG-IWVHVDAAYA 84 (310)
Q Consensus 28 ~~~Le~~i~~~~~-~~~~~~~v~~~~~~-~~~G~-~~pl~~I~~l~~~~g-~~l~vD~a~~ 84 (310)
++.+.+.|++... +. ...++..+.+. |..|. +..|++|.+++++.+ +-+++|-||.
T Consensus 120 l~~i~~~Ln~~~~~~~-v~i~~e~~agegs~~g~~F~~L~eii~~~~~~~~igvCiDtcH~ 179 (280)
T COG0648 120 LNRIAEALNELLEEEG-VIILLENTAGEGSGKGTQFGELAEIIDLIEEKERIGVCIDTCHA 179 (280)
T ss_pred HHHHHHHHHHHhhccC-CeEEEEEeccccCccccchhhHHHHHHhhcccCceEEEEEchhh
Confidence 4445555544433 22 12222333332 33343 678999999999998 9999999984
No 464
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=32.99 E-value=1.4e+02 Score=25.38 Aligned_cols=51 Identities=12% Similarity=0.066 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 30 SLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 30 ~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+-|..++=..-.+..|..+++...+ ..|.....+++.++|++||+++ ++..
T Consensus 154 HTEaavdLa~lAGl~p~~vicEil~-~dG~ma~~~~l~~fA~~h~l~~-isi~ 204 (218)
T PRK00910 154 HTEGTVDLMQMAGLQPAGVLCELTN-PDGTMAKTPEIIAFGKLHNMPV-LTIE 204 (218)
T ss_pred ccHHHHHHHHHcCCCceEEEEEEec-CCCCcCCHHHHHHHHHHcCCcE-EEHH
Confidence 3344444333345667777776654 4699999999999999999988 5543
No 465
>PRK14706 glycogen branching enzyme; Provisional
Probab=32.57 E-value=31 Score=34.37 Aligned_cols=27 Identities=22% Similarity=0.219 Sum_probs=23.7
Q ss_pred ccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 57 ITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 57 ~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
.|+.++++++++.||++|+.|++|-+.
T Consensus 213 ~g~~~~~~~lv~~~H~~gi~VilD~v~ 239 (639)
T PRK14706 213 LGTPEDFKYLVNHLHGLGIGVILDWVP 239 (639)
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 466778999999999999999999764
No 466
>PRK12457 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional
Probab=32.54 E-value=2.7e+02 Score=24.63 Aligned_cols=59 Identities=15% Similarity=0.087 Sum_probs=38.8
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCc--ccccCChHHHHHHHHH-hCcEEEeecccc
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTA--ITAVDTLKPLCDVAKQ-FGIWVHVDAAYA 84 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~--~G~~~pl~~I~~l~~~-~g~~l~vD~a~~ 84 (310)
.+++++..-+..+-...+... ++.+.=+.+. .-.+.|+..|..+-+. -++++++|.+|+
T Consensus 140 f~s~~e~~~aae~i~~~Gn~~-vilcERG~~fgy~~~~~D~~~ip~mk~~~t~lPVi~DpSHs 201 (281)
T PRK12457 140 FMSPTQMKHVVSKCREAGNDR-VILCERGSSFGYDNLVVDMLGFRQMKRTTGDLPVIFDVTHS 201 (281)
T ss_pred cCCHHHHHHHHHHHHHcCCCe-EEEEeCCCCCCCCCcccchHHHHHHHhhCCCCCEEEeCCcc
Confidence 588888888887766555433 4444444431 1224667777765554 399999999996
No 467
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=32.39 E-value=1.2e+02 Score=27.03 Aligned_cols=27 Identities=15% Similarity=0.196 Sum_probs=20.6
Q ss_pred EecCCCCCcccCHHHHHHHHHHHHHcCCC
Q 046506 16 IKTTKSSSYGLSPDSLMAKINSDVEAGLI 44 (310)
Q Consensus 16 v~~~~~~~~~id~~~Le~~i~~~~~~~~~ 44 (310)
.|-++ ++.+|.+.+++.++...+.+..
T Consensus 10 TPf~~--dg~iD~~~l~~lv~~~~~~Gv~ 36 (294)
T TIGR02313 10 TPFKR--NGDIDEEALRELIEFQIEGGSH 36 (294)
T ss_pred CCcCC--CCCcCHHHHHHHHHHHHHcCCC
Confidence 34444 4599999999999988776654
No 468
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=31.97 E-value=2.3e+02 Score=22.81 Aligned_cols=56 Identities=23% Similarity=0.258 Sum_probs=39.3
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCc-------------ccccCChHHHHHHHHHhCcEEEee
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTA-------------ITAVDTLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~-------------~G~~~pl~~I~~l~~~~g~~l~vD 80 (310)
.+++++-++.++.-.+-|....++..+..... .+..++|+.+.+.|.++|+.|+|-
T Consensus 16 ~~~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmkv~~G 84 (166)
T PF14488_consen 16 NWTPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMKVFVG 84 (166)
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCEEEEe
Confidence 68889999999887776765543333222111 133468999999999999999864
No 469
>PRK03353 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=31.96 E-value=1.4e+02 Score=25.28 Aligned_cols=50 Identities=20% Similarity=0.098 Sum_probs=35.2
Q ss_pred HHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 31 LMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 31 Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
-|..++=..-.+..|..|++...+ ..|...+.+++.++|++||+.+ ++..
T Consensus 154 tEaavdLa~lAgl~P~avi~ei~~-~~G~~~~~~~~~~fA~~~~l~~-v~i~ 203 (217)
T PRK03353 154 TEATIDLMTLAGLKPAGVLCELTN-DDGTMARAPECIAFAKQHNMPV-LTIE 203 (217)
T ss_pred hHHHHHHHHHcCCCceEEEEEeec-CCCCcccHHHHHHHHHHcCCcE-EEHH
Confidence 344444434445667777776643 4688899999999999999988 5554
No 470
>PF05378 Hydant_A_N: Hydantoinase/oxoprolinase N-terminal region; InterPro: IPR008040 This domain is found at the N terminus of the hydantoinase/oxoprolinase IPR002821 from INTERPRO family.
Probab=31.95 E-value=1.2e+02 Score=24.66 Aligned_cols=45 Identities=9% Similarity=0.172 Sum_probs=29.5
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHH--HHHHHHHhC
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKP--LCDVAKQFG 74 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~--I~~l~~~~g 74 (310)
.+|.+++++++++-...+...+.|+..+. ..+|-+| +++++++.|
T Consensus 130 ~ld~~~v~~~~~~l~~~gv~avAV~~~fS-----~~np~hE~~v~eii~e~g 176 (176)
T PF05378_consen 130 PLDEDEVREALRELKDKGVEAVAVSLLFS-----YRNPEHEQRVAEIIREEG 176 (176)
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEEECccC-----CCCHHHHHHHHHHHHhcC
Confidence 57889999999988877655433433332 2456554 777887765
No 471
>PF05176 ATP-synt_10: ATP10 protein; InterPro: IPR007849 This entry represents the ATPase assembly factor ATP10 found in mitochondria, which is essential for the assembly of the mitochondrial F1-F0 complex. A yeast nuclear gene (ATP10) encodes a product that is essential for the assembly of a functional mitochondrial ATPase complex. Mutations in ATP10 induce a loss of rutamycin sensitivity in the mitochondrial ATPase, but do not affect the respiratory enzymes. ATP10 has an Mr of 30,293 and its primary structure is not related to any known subunit of the yeast or mammalian mitochondrial ATPase complexes. ATP10 is associated with the mitochondrial membrane. It is suggested that the ATP10 product is not a subunit of the ATPase complex but rather a protein required for the assembly of the F0 sector of the complex [].; GO: 0033615 mitochondrial proton-transporting ATP synthase complex assembly, 0005743 mitochondrial inner membrane
Probab=31.76 E-value=81 Score=27.45 Aligned_cols=47 Identities=15% Similarity=0.210 Sum_probs=31.1
Q ss_pred HHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHH
Q 046506 252 ELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQE 299 (310)
Q Consensus 252 ~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~ 299 (310)
.+.+.|.-...........+..+.||+. .+-.-|++|++.|...++.
T Consensus 205 ~iRe~Lgi~N~~~GYvyLVD~~grIRWa-gsG~At~~E~~~L~k~~~~ 251 (252)
T PF05176_consen 205 DIREALGINNSYVGYVYLVDPNGRIRWA-GSGPATPEELESLWKCVKG 251 (252)
T ss_pred HHHHHhCCCCCCcCeEEEECCCCeEEeC-ccCCCCHHHHHHHHHHHhc
Confidence 5556553332222222345678899998 5567999999999988764
No 472
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=30.39 E-value=2.4e+02 Score=21.23 Aligned_cols=47 Identities=17% Similarity=0.194 Sum_probs=30.4
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEE
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVH 78 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~ 78 (310)
+++.+.+.|+.-.+.+ ...+++-.+.... .+ | +++.+.|++++++++
T Consensus 57 ~~~~~~~~i~~L~~~~--~agL~i~~~~~~~-~i-P-~~~i~~A~~~~lPli 103 (123)
T PF07905_consen 57 DEEELREFIRELAEKG--AAGLGIKTGRYLD-EI-P-EEIIELADELGLPLI 103 (123)
T ss_pred CHHHHHHHHHHHHHCC--CeEEEEeccCccc-cC-C-HHHHHHHHHcCCCEE
Confidence 4566888887766544 3355554443332 22 2 789999999999876
No 473
>cd00248 Mth938-like Mth938-like domain. The members of this family include: Mth938, 2P1, Xcr35, Rpa2829, and several uncharacterized sequences. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. 2P1 is a partially characterized nuclear protein which is homologous to E3-3 from rat and known to be alternately spliced. Xcr35 and Rpa2829 are hypothetical proteins of unknown function from the Xanthomonas campestris and Rhodopseudomonas palustris genomes, respectively, for which the crystal structures have been determined.
Probab=29.87 E-value=2e+02 Score=21.23 Aligned_cols=50 Identities=24% Similarity=0.320 Sum_probs=35.3
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
.+++++|+..+... . |-++++-++.+. ..+=+++.+.++++|+-+.+-.+
T Consensus 38 ~l~~~~l~~~~~~~-~----peiliiGTG~~~---~~~~~~~~~~l~~~gI~vE~m~T 87 (109)
T cd00248 38 DLDPEALLPLLAED-R----PDILLIGTGAEI---AFLPRALRAALRAAGIGVEVMST 87 (109)
T ss_pred cCCHHHHHHHHhhC-C----CCEEEEcCCCCC---CcCCHHHHHHHHHcCCeEEEeCc
Confidence 69999999998765 1 335555545442 34568899999999998865543
No 474
>PLN02960 alpha-amylase
Probab=29.80 E-value=37 Score=34.97 Aligned_cols=29 Identities=28% Similarity=0.403 Sum_probs=25.0
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+..|+.++++++++-||++|+.|++|-++
T Consensus 460 ~~yGtp~dfk~LVd~aH~~GI~VILDvV~ 488 (897)
T PLN02960 460 SRFGTPDDFKRLVDEAHGLGLLVFLDIVH 488 (897)
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 34577788999999999999999999864
No 475
>COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism]
Probab=29.73 E-value=34 Score=32.53 Aligned_cols=27 Identities=26% Similarity=0.310 Sum_probs=25.3
Q ss_pred cccccCChHHHHHHHHHhCcEEEeecc
Q 046506 56 AITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 56 ~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
..|+.++++++.+.+|++|+.+++|..
T Consensus 72 ~~Gt~~d~~~li~~~H~~gi~vi~D~V 98 (505)
T COG0366 72 HFGTEEDFKELVEEAHKRGIKVILDLV 98 (505)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 578899999999999999999999986
No 476
>TIGR03278 methan_mark_10 putative methanogenesis marker protein 10. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The presence of motifs with seven invariant Cys residues in the N-terminal 50 residues, including three instances of CXXC, would be consistent with function as an oxidoreductase with FeS clusters. The exact function is unknown, but likely is linked to methanogenesis. In most genomes, the member of this family is encoded by a gene next to, and divergently transcribed from, the methyl coenzyme M reductase operon.
Probab=29.44 E-value=1.8e+02 Score=27.28 Aligned_cols=59 Identities=10% Similarity=0.130 Sum_probs=36.6
Q ss_pred ccCHHHHHHHHHHHHHcC-CCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 25 GLSPDSLMAKINSDVEAG-LIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~-~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
.++++++.+.+.+..... .....|.++.+--.+ .-..+.++.+.|++.|+.++++-+.+
T Consensus 53 ~~t~~evl~ev~~d~~~~~~~~ggVtisGGGepl-~~~~l~eLl~~lk~~gi~taI~~TnG 112 (404)
T TIGR03278 53 FIPPQVVLGEVQTSLGFRTGRDTKVTISGGGDVS-CYPELEELTKGLSDLGLPIHLGYTSG 112 (404)
T ss_pred cCCHHHHHHHHHHHHHHhcCCCCEEEEECCcccc-cCHHHHHHHHHHHhCCCCEEEeCCCC
Confidence 578888888887765411 011234343332211 23568899999999999988864443
No 477
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX. This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase.
Probab=29.43 E-value=34 Score=34.51 Aligned_cols=26 Identities=27% Similarity=0.381 Sum_probs=23.1
Q ss_pred cccCChHHHHHHHHHhCcEEEeeccc
Q 046506 58 TAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 58 G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
|.+.+++++++-||+.|+.|++|.+.
T Consensus 242 g~~~efk~LV~~~H~~GI~VIlDvV~ 267 (688)
T TIGR02100 242 GQVAEFKTMVRALHDAGIEVILDVVY 267 (688)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 55678999999999999999999874
No 478
>cd05126 Mth938 Mth938 domain. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. The function of the protein has not been determined.
Probab=29.36 E-value=1.3e+02 Score=22.78 Aligned_cols=50 Identities=18% Similarity=0.210 Sum_probs=35.2
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
.+++++|++.|... |-+|++-++. .|...+-.++.+.+++.|+-+.+-.+
T Consensus 45 ~l~~~~l~~ll~~~------peivliGTG~--~~~~~~~~~~~~~l~~~Gi~ve~m~T 94 (117)
T cd05126 45 GLQPEELEELLEEG------VEVIVIGTGQ--SGALKVPPETVEKLEKRGVEVLVLPT 94 (117)
T ss_pred cCCHHHHHHHHhcC------CCEEEEcCCC--CccccCCHHHHHHHHhcCCEEEEcCh
Confidence 58999999999764 3355554443 34444567888899999998877433
No 479
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=28.95 E-value=57 Score=28.31 Aligned_cols=24 Identities=21% Similarity=0.153 Sum_probs=21.9
Q ss_pred cCChHHHHHHHHHhCcEEEeeccc
Q 046506 60 VDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 60 ~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
...-+++.++.+++++-++||++|
T Consensus 52 ~l~~e~l~~~l~e~~i~llIDATH 75 (257)
T COG2099 52 FLGAEGLAAFLREEGIDLLIDATH 75 (257)
T ss_pred cCCHHHHHHHHHHcCCCEEEECCC
Confidence 456889999999999999999999
No 480
>CHL00073 chlN photochlorophyllide reductase subunit N
Probab=28.72 E-value=1.3e+02 Score=28.80 Aligned_cols=54 Identities=15% Similarity=0.049 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCccccc-CChHHHHHHHH-HhCcEEEeecc
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAV-DTLKPLCDVAK-QFGIWVHVDAA 82 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~-~pl~~I~~l~~-~~g~~l~vD~a 82 (310)
+-+.|++.|.+-.+......++++.+|.+ +.| +||+.+++-+. ++|++++.=-+
T Consensus 81 ~~~~L~~~i~ei~~~~~p~~ifv~~TC~t--~iIGdDle~va~~~~~~~gipVV~v~~ 136 (457)
T CHL00073 81 DYEELKRLCLQIKKDRNPSVIVWIGTCTT--EIIKMDLEGMAPKLEAEIGIPIVVARA 136 (457)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEEccCcH--HhhccCHHHHHHHHHHhhCCCEEEEeC
Confidence 34678888877665443344555555544 332 89999987665 78998765433
No 481
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=28.71 E-value=1.3e+02 Score=26.36 Aligned_cols=50 Identities=10% Similarity=0.142 Sum_probs=32.0
Q ss_pred cccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh
Q 046506 24 YGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF 73 (310)
Q Consensus 24 ~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~ 73 (310)
+.+|.+.+++.++...+.+..-..++-+++....=+.++-.++.+.+.+.
T Consensus 15 g~iD~~~~~~li~~l~~~Gv~Gl~~~GstGE~~~Lt~eEr~~l~~~~~~~ 64 (279)
T cd00953 15 NKIDKEKFKKHCENLISKGIDYVFVAGTTGLGPSLSFQEKLELLKAYSDI 64 (279)
T ss_pred CCcCHHHHHHHHHHHHHcCCcEEEEcccCCCcccCCHHHHHHHHHHHHHH
Confidence 59999999999998887775544444444443333344555566655554
No 482
>PRK13585 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=28.41 E-value=1.2e+02 Score=25.77 Aligned_cols=52 Identities=8% Similarity=0.123 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
||.++.+.+.+. +. ..+.+..-.....+.......|.++|+++++++.|+|-
T Consensus 33 ~~~e~a~~~~~~---G~-~~l~i~dl~~~~~~~~~~~~~i~~i~~~~~~~l~v~GG 84 (241)
T PRK13585 33 DPVEVAKRWVDA---GA-ETLHLVDLDGAFEGERKNAEAIEKIIEAVGVPVQLGGG 84 (241)
T ss_pred CHHHHHHHHHHc---CC-CEEEEEechhhhcCCcccHHHHHHHHHHcCCcEEEcCC
Confidence 555555555432 32 22444454445567778899999999999999999753
No 483
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=28.39 E-value=35 Score=30.94 Aligned_cols=92 Identities=23% Similarity=0.214 Sum_probs=52.9
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccC--CcccccCChHHHHHHHHHhC------cEEEeecccccccccChhhhhh
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGT--TAITAVDTLKPLCDVAKQFG------IWVHVDAAYAGSACICPEFRHF 96 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~--~~~G~~~pl~~I~~l~~~~g------~~l~vD~a~~~~~~~~~~~~~~ 96 (310)
.+-.|+++.+.....+ ++++-|++- |-....+++++|..++++.- +++.+|+..|=.++.- -+.+
T Consensus 208 aVafDAi~~Akar~~D-----vvliDTAGRLhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~Q--Ak~F 280 (340)
T COG0552 208 AVAFDAIQAAKARGID-----VVLIDTAGRLHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQ--AKIF 280 (340)
T ss_pred HHHHHHHHHHHHcCCC-----EEEEeCcccccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHH--HHHH
Confidence 4555666666555432 355556663 55566788999999999864 7888899876444321 1111
Q ss_pred hcCCCCCCeeeeecccccccccceEEEEEe
Q 046506 97 IDGVEGADSFSLNAHKWFFTTLDCCCLWVK 126 (310)
Q Consensus 97 ~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~ 126 (310)
... -+.|-+.+ .|.=+.+.|..++-+.
T Consensus 281 ~ea-v~l~GiIl--TKlDgtAKGG~il~I~ 307 (340)
T COG0552 281 NEA-VGLDGIIL--TKLDGTAKGGIILSIA 307 (340)
T ss_pred HHh-cCCceEEE--EecccCCCcceeeeHH
Confidence 111 12444443 5665666665555443
No 484
>PRK12568 glycogen branching enzyme; Provisional
Probab=28.04 E-value=41 Score=34.01 Aligned_cols=27 Identities=22% Similarity=0.212 Sum_probs=23.8
Q ss_pred ccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 57 ITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 57 ~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
.|+.++++++++.||++|+.+++|-..
T Consensus 315 ~G~~~dfk~lV~~~H~~Gi~VIlD~V~ 341 (730)
T PRK12568 315 HGSPDGFAQFVDACHRAGIGVILDWVS 341 (730)
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 466778999999999999999999764
No 485
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=27.94 E-value=39 Score=29.45 Aligned_cols=21 Identities=10% Similarity=0.156 Sum_probs=18.6
Q ss_pred ChHHHHHHHHHhCcEEEeecc
Q 046506 62 TLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 62 pl~~I~~l~~~~g~~l~vD~a 82 (310)
.+++|.+.+++.++++++||-
T Consensus 120 ~i~~iley~~~~dvP~VIDaD 140 (306)
T KOG3974|consen 120 EIAKILEYLRGKDVPLVIDAD 140 (306)
T ss_pred HHHHHHHHHhcCCCcEEEcCC
Confidence 378899999999999999974
No 486
>PRK14705 glycogen branching enzyme; Provisional
Probab=27.81 E-value=40 Score=36.26 Aligned_cols=29 Identities=28% Similarity=0.222 Sum_probs=25.1
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+..|+.++++++++-||+.|+-|++|-..
T Consensus 809 ~ryGt~~dfk~lVd~~H~~GI~VILD~V~ 837 (1224)
T PRK14705 809 SRFGHPDEFRFLVDSLHQAGIGVLLDWVP 837 (1224)
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 34577888999999999999999999764
No 487
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=27.62 E-value=2.5e+02 Score=23.61 Aligned_cols=79 Identities=16% Similarity=0.142 Sum_probs=48.4
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHH---hC--cEEEeecccccccccChhhhhhhcC
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQ---FG--IWVHVDAAYAGSACICPEFRHFIDG 99 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~---~g--~~l~vD~a~~~~~~~~~~~~~~~~~ 99 (310)
....++|.+.|++..... ....|++.. ++..|....+++|.+..++ .+ +..+++++.+++.+...
T Consensus 28 ~~~~~~l~~~l~~a~~d~-~ik~vvL~~-~s~gg~~~~~~el~~~i~~~~~~~kpVia~~~~~~sggy~las-------- 97 (222)
T cd07018 28 ELSLRDLLEALEKAAEDD-RIKGIVLDL-DGLSGGLAKLEELRQALERFRASGKPVIAYADGYSQGQYYLAS-------- 97 (222)
T ss_pred CccHHHHHHHHHHHhcCC-CeEEEEEEC-CCCCCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCCchhhhhhh--------
Confidence 567889999998765432 233455544 4456677778888776643 34 45677765444433221
Q ss_pred CCCCCeeeeecccccc
Q 046506 100 VEGADSFSLNAHKWFF 115 (310)
Q Consensus 100 ~~~~D~~~~~~hK~l~ 115 (310)
.||-+.++++-.++
T Consensus 98 --aad~I~a~p~~~vg 111 (222)
T cd07018 98 --AADEIYLNPSGSVE 111 (222)
T ss_pred --hCCEEEECCCceEE
Confidence 38888888765544
No 488
>PLN02784 alpha-amylase
Probab=27.27 E-value=43 Score=34.43 Aligned_cols=28 Identities=32% Similarity=0.359 Sum_probs=25.1
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+-.|+.++++++++-||++|+.+++|.+
T Consensus 562 s~yGT~~ELk~LI~a~H~~GIkVIlDiV 589 (894)
T PLN02784 562 SRYGTIDELKDLVKSFHEVGIKVLGDAV 589 (894)
T ss_pred cCcCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4468888999999999999999999986
No 489
>COG2052 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.95 E-value=1.3e+02 Score=20.74 Aligned_cols=31 Identities=19% Similarity=0.394 Sum_probs=23.4
Q ss_pred EEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 47 FLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 47 ~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
++.++.+.+ .|++++.+-++..|.+ +|+++|
T Consensus 19 viaIVsPES-----aPiKRii~eArdr~~L--IDATYG 49 (89)
T COG2052 19 VIAIVSPES-----APIKRIIQEARDRGML--IDATYG 49 (89)
T ss_pred EEEEECCCc-----ccHHHHHHHHHhcCcE--EEcccC
Confidence 555555555 5999999999998864 688774
No 490
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=26.75 E-value=56 Score=27.60 Aligned_cols=48 Identities=8% Similarity=0.097 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccc-cCChHHHHHHHHHhCcEEEeec
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITA-VDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~-~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
.+.+|+++.... .++-+=.-....-. ..-.+++.++|++|++.++|++
T Consensus 24 ~~~ve~al~~Gv------~~vQlR~K~~~~~~~~~~a~~~~~lc~~~~v~liINd 72 (211)
T COG0352 24 LEWVEAALKGGV------TAVQLREKDLSDEEYLALAEKLRALCQKYGVPLIIND 72 (211)
T ss_pred HHHHHHHHhCCC------eEEEEecCCCChHHHHHHHHHHHHHHHHhCCeEEecC
Confidence 677888876531 12333211111111 3446789999999999999986
No 491
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=26.37 E-value=1.5e+02 Score=25.49 Aligned_cols=51 Identities=22% Similarity=0.220 Sum_probs=35.5
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEeecc
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD~a 82 (310)
+.+..++..|...-. ..=++=+.++++. +.| |++..++||+||+.+.--|+
T Consensus 9 l~~~~~~d~Le~~g~---yID~lKfg~Gt~~---l~~~~~l~eki~la~~~~V~v~~GGt 62 (237)
T TIGR03849 9 LPPKFVEDYLKVCGD---YITFVKFGWGTSA---LIDRDIVKEKIEMYKDYGIKVYPGGT 62 (237)
T ss_pred CCHHHHHHHHHHhhh---heeeEEecCceEe---eccHHHHHHHHHHHHHcCCeEeCCcc
Confidence 678888988875432 1113334444443 455 99999999999999998875
No 492
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=26.04 E-value=99 Score=27.69 Aligned_cols=49 Identities=12% Similarity=0.190 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
++.+++...+ +. ..+|+++.+..+.| -.+++.++|+++|+.++==.+.|
T Consensus 83 ~~al~e~~~~----Gv-k~~vIisaGf~e~g---~~~~~~~~ar~~girviGPNc~G 131 (300)
T PLN00125 83 AAAILEAMEA----EL-DLVVCITEGIPQHD---MVRVKAALNRQSKTRLIGPNCPG 131 (300)
T ss_pred HHHHHHHHHc----CC-CEEEEECCCCCccc---HHHHHHHHHhhcCCEEECCCCce
Confidence 4555555543 32 34677777777666 24556678999999998554543
No 493
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=25.86 E-value=38 Score=33.57 Aligned_cols=24 Identities=29% Similarity=0.486 Sum_probs=21.2
Q ss_pred cCChHHHHHHHHHhCcEEEeeccc
Q 046506 60 VDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 60 ~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+++++++++-||++|+.|++|.++
T Consensus 228 ~~efk~lV~~~H~~Gi~VilDvV~ 251 (605)
T TIGR02104 228 IRELKQMIQALHENGIRVIMDVVY 251 (605)
T ss_pred HHHHHHHHHHHHHCCCEEEEEEEc
Confidence 356999999999999999999874
No 494
>PLN02161 beta-amylase
Probab=25.85 E-value=6.2e+02 Score=24.57 Aligned_cols=55 Identities=15% Similarity=0.090 Sum_probs=32.9
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccc--c---CChHHHHHHHHHhCcEEEe
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITA--V---DTLKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~--~---~pl~~I~~l~~~~g~~l~v 79 (310)
.-+.++|+..|+.-+..++--+.|=+-++-.+.-. . .--++++++|++.|+.+++
T Consensus 113 v~~~~al~~~L~~LK~~GVdGVmvDVWWGiVE~~~p~~YdWsgY~~l~~mvr~~GLKlq~ 172 (531)
T PLN02161 113 IKRLKALTVSLKALKLAGVHGIAVEVWWGIVERFSPLEFKWSLYEELFRLISEAGLKLHV 172 (531)
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEEeeeeeeecCCCCcCCcHHHHHHHHHHHHcCCeEEE
Confidence 46778888888887765544333333232222100 0 1167899999998888764
No 495
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=25.84 E-value=3.4e+02 Score=25.75 Aligned_cols=56 Identities=13% Similarity=0.189 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccc--cCChHHHHHHHHHhCcEEEeecccc
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITA--VDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~--~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
++...+.+++..+.+.+ .+++++.+....|. ..--+++.++|+++|+.++=-++.|
T Consensus 74 ~~~~~~~l~e~~~~gv~-~~vi~s~gf~e~g~~g~~~~~~l~~~a~~~girvlGPnc~G 131 (447)
T TIGR02717 74 AKYVPQVVEECGEKGVK-GAVVITAGFKEVGEEGAELEQELVEIARKYGMRLLGPNCLG 131 (447)
T ss_pred HHHHHHHHHHHHhcCCC-EEEEECCCccccCcchHHHHHHHHHHHHHcCCEEEecCeee
Confidence 34445555544444433 46677777666663 1113789999999999998777654
No 496
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=25.68 E-value=91 Score=27.68 Aligned_cols=47 Identities=17% Similarity=0.298 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
++.+++...+ +. ..+++++.+.... .-++|.++|+++|+.++==.+.
T Consensus 77 ~~~l~e~~~~----Gv-k~avIis~Gf~e~----~~~~l~~~a~~~girilGPNc~ 123 (286)
T TIGR01019 77 ADAIFEAIDA----GI-ELIVCITEGIPVH----DMLKVKRYMEESGTRLIGPNCP 123 (286)
T ss_pred HHHHHHHHHC----CC-CEEEEECCCCCHH----HHHHHHHHHHHcCCEEECCCCc
Confidence 4445555443 32 3466666664321 3478999999999999844444
No 497
>PF04577 DUF563: Protein of unknown function (DUF563); InterPro: IPR007657 This is a family of uncharacterised glycosyltransferases belonging to glycosyltransferase family 61. Sequences are further processed into a mature form.; GO: 0016757 transferase activity, transferring glycosyl groups
Probab=25.65 E-value=3.6e+02 Score=21.80 Aligned_cols=89 Identities=13% Similarity=0.108 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHcCC--CcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeee
Q 046506 30 SLMAKINSDVEAGL--IPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFS 107 (310)
Q Consensus 30 ~Le~~i~~~~~~~~--~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~ 107 (310)
.+.+.+.+.-.... +|.++.++=..+....+.+.++|.+.++++|.. .+|-.. ..+.++ +.-+..+|++.
T Consensus 86 ~~~~~~~~~~~~~~~~~p~i~~i~R~~~~~R~i~Ne~el~~~l~~~~~~-~v~~~~----~s~~eq---v~~~~~a~vii 157 (206)
T PF04577_consen 86 ALRDRIRRKLNLPPPKRPRILYISRRKSGSRRILNEDELLEILKKYGFE-VVDPED----LSFEEQ---VKLFASAKVII 157 (206)
T ss_pred HHHHHHHHHhCCcccCCCeEEEEecCCCCCCcCcCHHHHHHHHhhCCeE-EEeCCC----CCHHHH---HHHhcCCCEEE
Confidence 66666666544333 466666666445567788999999999999955 444221 112221 22223466655
Q ss_pred e----ecccccccccceEEEEEe
Q 046506 108 L----NAHKWFFTTLDCCCLWVK 126 (310)
Q Consensus 108 ~----~~hK~l~~p~g~g~l~v~ 126 (310)
. +.+-.+.+|.|++++-+.
T Consensus 158 g~hGs~l~n~~F~~~~s~viei~ 180 (206)
T PF04577_consen 158 GPHGSALTNLLFMPPGSTVIEIF 180 (206)
T ss_pred ecCchHhheeeecCCCCEEEEEe
Confidence 3 233444456667666653
No 498
>TIGR00315 cdhB CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit. Nomenclature follows the description for Methanosarcina thermophila. The complex is also found in Archaeoglobus fulgidus, not considered a methanogen, but is otherwise generally associated with methanogenesis.
Probab=25.39 E-value=96 Score=24.99 Aligned_cols=48 Identities=15% Similarity=0.198 Sum_probs=33.2
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEee
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD 80 (310)
.++|+.+.+.|.+.++ |.+++-....+ . .-.+++.+++++.|++++.-
T Consensus 14 ~~~p~~aa~lLk~AKR----PvIivG~ga~~-~---~a~e~l~~laEklgiPVvtT 61 (162)
T TIGR00315 14 LVSPKLVAMMIKRAKR----PLLIVGPENLE-D---EEKELIVKFIEKFDLPVVAT 61 (162)
T ss_pred ccCHHHHHHHHHcCCC----cEEEECCCcCc-c---cHHHHHHHHHHHHCCCEEEc
Confidence 5689999999987654 65444332222 1 23778899999999998844
No 499
>PF05209 MinC_N: Septum formation inhibitor MinC, N-terminal domain; InterPro: IPR007874 In Escherichia coli FtsZ (P0A9A6 from SWISSPROT) assembles into a Z ring at midcell. Its assembly at polar sites is prevented by the min system. MinC P18196 from SWISSPROT, a component of this system, is an inhibitor of FtsZ assembly that is positioned within the cell by interaction with the MinDE proteins. MinC is an oligomer, probably a dimer []. The C-terminal half of MinC is the most conserved and interacts with MinD. The N-terminal half is thought to interact with FtsZ. MinC rapidly oscillates between the poles of the cell to destabilise FtsZ filaments that have formed before they mature into polar Z rings; GO: 0051302 regulation of cell division; PDB: 3GHF_A 1HF2_C.
Probab=25.26 E-value=1.3e+02 Score=21.76 Aligned_cols=49 Identities=14% Similarity=0.222 Sum_probs=30.7
Q ss_pred ccCHHHHHHHHHHHHHcC-----CCcEEEEEeccCCcccccCChHHHHHHHHHhCcEE
Q 046506 25 GLSPDSLMAKINSDVEAG-----LIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWV 77 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~-----~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l 77 (310)
..|++++.+.|.+..... ..|.++-+... -.-.++.+|.++|+++|+..
T Consensus 22 ~~d~~~l~~~L~~ki~~ap~FF~~~pvvldl~~l----~~~~dl~~L~~~l~~~gl~~ 75 (99)
T PF05209_consen 22 SADLDELLQALDEKIAQAPDFFKNAPVVLDLSNL----PDELDLAALVELLRRHGLRP 75 (99)
T ss_dssp SS-HHHHHHHHHHHHHHTHHHCTTTEEEEEEEEE----ETTHHHHHHHHHHHCCCHCC
T ss_pred CCCHHHHHHHHHHHHHhChHhHcCCCeEEehhhc----CChhhHHHHHHHHHHcCCEE
Confidence 357888888888765532 23543333322 22346999999999999643
No 500
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=25.24 E-value=55 Score=17.78 Aligned_cols=19 Identities=16% Similarity=0.065 Sum_probs=14.0
Q ss_pred CCCCCcccCHHHHHHHHHH
Q 046506 19 TKSSSYGLSPDSLMAKINS 37 (310)
Q Consensus 19 ~~~~~~~id~~~Le~~i~~ 37 (310)
|.++++.|+.++|...+.+
T Consensus 10 D~d~dG~I~~~el~~~l~~ 28 (31)
T PF13405_consen 10 DKDGDGFIDFEELRAILRK 28 (31)
T ss_dssp -TTSSSEEEHHHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHH
Confidence 3345669999999998873
Done!