Query 046506
Match_columns 310
No_of_seqs 118 out of 1212
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 22:37:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046506.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046506hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e1o_A HDC, histidine decarbox 100.0 2.5E-42 8.5E-47 326.8 29.3 278 1-306 203-480 (481)
2 3k40_A Aromatic-L-amino-acid d 100.0 1.7E-42 5.7E-47 327.4 27.1 277 1-306 197-473 (475)
3 3vp6_A Glutamate decarboxylase 100.0 1.7E-40 5.8E-45 316.3 31.6 296 1-304 207-505 (511)
4 1js3_A DDC;, DOPA decarboxylas 100.0 4.3E-40 1.5E-44 311.9 28.7 280 1-306 197-476 (486)
5 2okj_A Glutamate decarboxylase 100.0 3.4E-38 1.2E-42 300.2 30.0 296 1-304 204-502 (504)
6 2jis_A Cysteine sulfinic acid 100.0 2E-37 6.7E-42 295.7 30.2 294 1-302 218-513 (515)
7 2qma_A Diaminobutyrate-pyruvat 100.0 1.2E-37 4.3E-42 295.8 27.8 279 2-304 218-496 (497)
8 3hbx_A GAD 1, glutamate decarb 100.0 3.6E-32 1.2E-36 258.4 20.0 264 2-306 170-446 (502)
9 2dgk_A GAD-beta, GADB, glutama 100.0 7.3E-32 2.5E-36 253.1 19.9 265 2-306 155-436 (452)
10 3mad_A Sphingosine-1-phosphate 99.9 1.6E-26 5.5E-31 220.2 20.2 258 2-306 208-471 (514)
11 2z67_A O-phosphoseryl-tRNA(SEC 99.9 7.2E-27 2.5E-31 219.4 14.6 247 2-301 192-455 (456)
12 3mc6_A Sphingosine-1-phosphate 99.9 7.3E-27 2.5E-31 221.5 12.7 257 2-305 174-438 (497)
13 3f9t_A TDC, L-tyrosine decarbo 99.9 6E-25 2.1E-29 201.1 19.3 248 3-302 140-396 (397)
14 3bc8_A O-phosphoseryl-tRNA(SEC 99.9 6.4E-25 2.2E-29 202.9 13.2 186 1-214 159-350 (450)
15 3e9k_A Kynureninase; kynurenin 99.9 1.1E-23 3.9E-28 197.9 21.3 250 15-304 190-461 (465)
16 3nnk_A Ureidoglycine-glyoxylat 99.9 1.2E-23 4E-28 194.0 16.1 261 3-304 107-390 (411)
17 3zrp_A Serine-pyruvate aminotr 99.9 8.8E-23 3E-27 186.2 21.0 255 4-305 97-364 (384)
18 2yrr_A Aminotransferase, class 99.9 3.2E-23 1.1E-27 186.8 15.6 254 4-302 94-351 (353)
19 3isl_A Purine catabolism prote 99.9 1.6E-23 5.4E-28 193.4 13.9 261 3-304 105-390 (416)
20 1kmj_A Selenocysteine lyase; p 99.9 2.9E-22 1E-26 184.0 22.1 255 4-304 135-405 (406)
21 3e77_A Phosphoserine aminotran 99.9 2E-24 6.7E-29 197.1 7.1 245 4-303 123-374 (377)
22 4hvk_A Probable cysteine desul 99.9 3.4E-22 1.2E-26 181.9 21.6 243 6-308 111-377 (382)
23 3ffr_A Phosphoserine aminotran 99.9 1E-23 3.5E-28 190.9 11.1 247 4-301 103-361 (362)
24 3kgw_A Alanine-glyoxylate amin 99.9 2.9E-23 9.9E-28 190.0 13.7 262 4-306 118-390 (393)
25 2dr1_A PH1308 protein, 386AA l 99.9 1.2E-22 4E-27 185.6 17.5 257 4-304 115-379 (386)
26 2z9v_A Aspartate aminotransfer 99.9 1.8E-22 6.1E-27 185.0 18.5 258 5-304 104-371 (392)
27 2huf_A Alanine glyoxylate amin 99.9 5.5E-23 1.9E-27 188.5 13.8 260 5-306 115-385 (393)
28 1m32_A 2-aminoethylphosphonate 99.9 3.7E-22 1.3E-26 180.7 18.9 258 4-302 100-363 (366)
29 1t3i_A Probable cysteine desul 99.9 5.6E-22 1.9E-26 183.1 20.1 257 5-305 141-414 (420)
30 3f0h_A Aminotransferase; RER07 99.9 2.9E-22 9.8E-27 182.6 15.2 252 4-302 115-372 (376)
31 3hl2_A O-phosphoseryl-tRNA(SEC 99.9 1.8E-22 6.2E-27 184.7 13.1 263 1-308 177-465 (501)
32 3ke3_A Putative serine-pyruvat 99.9 1.2E-21 4.1E-26 179.4 18.4 254 13-305 102-377 (379)
33 3qm2_A Phosphoserine aminotran 99.9 1.9E-23 6.5E-28 191.5 6.3 235 13-303 140-384 (386)
34 4eb5_A Probable cysteine desul 99.9 1.9E-21 6.4E-26 177.4 19.2 241 6-306 111-375 (382)
35 1vjo_A Alanine--glyoxylate ami 99.9 6.2E-22 2.1E-26 181.6 15.0 256 3-301 128-392 (393)
36 3m5u_A Phosphoserine aminotran 99.9 1.1E-22 3.7E-27 184.9 9.2 239 4-303 112-359 (361)
37 1iug_A Putative aspartate amin 99.9 1.6E-21 5.5E-26 175.9 16.4 246 6-304 97-348 (352)
38 1elu_A L-cysteine/L-cystine C- 99.9 1.1E-21 3.7E-26 179.5 15.2 255 4-300 123-388 (390)
39 2bkw_A Alanine-glyoxylate amin 99.9 1.2E-21 4E-26 178.9 15.0 254 4-302 106-382 (385)
40 2ch1_A 3-hydroxykynurenine tra 99.9 9.2E-22 3.1E-26 180.5 13.8 263 3-305 112-384 (396)
41 3lvm_A Cysteine desulfurase; s 99.9 3.4E-20 1.2E-24 171.6 22.5 240 7-306 137-401 (423)
42 3cai_A Possible aminotransfera 99.9 1.3E-20 4.3E-25 173.6 18.1 240 6-300 137-405 (406)
43 1eg5_A Aminotransferase; PLP-d 99.9 3.5E-20 1.2E-24 168.9 19.9 243 4-305 110-377 (384)
44 1qz9_A Kynureninase; kynurenin 99.8 5E-20 1.7E-24 170.1 19.9 234 28-304 155-402 (416)
45 1wyu_B Glycine dehydrogenase s 99.8 8.2E-21 2.8E-25 179.0 13.6 254 2-302 172-439 (474)
46 1wyu_A Glycine dehydrogenase ( 99.8 3.7E-20 1.3E-24 172.7 17.6 243 4-301 172-437 (438)
47 3tqx_A 2-amino-3-ketobutyrate 99.8 1.1E-19 3.8E-24 166.7 20.5 244 4-304 145-396 (399)
48 1rv3_A Serine hydroxymethyltra 99.8 4.5E-20 1.5E-24 174.4 17.4 249 13-303 166-430 (483)
49 2e7j_A SEP-tRNA:Cys-tRNA synth 99.8 1E-20 3.4E-25 172.0 11.7 242 4-303 111-369 (371)
50 3vax_A Putative uncharacterize 99.8 1.7E-20 5.8E-25 172.3 13.0 247 6-302 132-398 (400)
51 1v72_A Aldolase; PLP-dependent 99.8 2.3E-20 7.8E-25 168.5 13.4 240 7-304 108-353 (356)
52 2w8t_A SPT, serine palmitoyltr 99.8 4.5E-19 1.5E-23 164.8 22.3 231 26-306 178-417 (427)
53 1fc4_A 2-amino-3-ketobutyrate 99.8 6.5E-19 2.2E-23 161.9 21.9 232 26-304 159-397 (401)
54 3dzz_A Putative pyridoxal 5'-p 99.8 6.5E-20 2.2E-24 167.7 13.1 251 3-304 126-389 (391)
55 2fnu_A Aminotransferase; prote 99.8 1.2E-19 4.2E-24 165.0 13.2 254 4-304 92-372 (375)
56 1svv_A Threonine aldolase; str 99.8 6.9E-19 2.4E-23 158.8 17.8 242 3-304 109-358 (359)
57 2a7v_A Serine hydroxymethyltra 99.8 3.7E-18 1.3E-22 160.8 22.2 237 15-303 180-440 (490)
58 3dyd_A Tyrosine aminotransfera 99.8 5.8E-19 2E-23 164.1 16.1 255 3-305 159-425 (427)
59 2vyc_A Biodegradative arginine 99.8 1.2E-18 4.2E-23 172.2 18.0 261 4-304 263-605 (755)
60 2dkj_A Serine hydroxymethyltra 99.8 1.4E-18 4.7E-23 159.9 17.2 238 13-303 136-387 (407)
61 3piu_A 1-aminocyclopropane-1-c 99.8 4.4E-18 1.5E-22 158.4 20.6 259 5-305 155-433 (435)
62 1iay_A ACC synthase 2, 1-amino 99.8 6.4E-18 2.2E-22 156.8 21.3 253 5-303 152-426 (428)
63 1b9h_A AHBA synthase, protein 99.8 6.2E-18 2.1E-22 154.8 20.7 254 4-303 96-387 (388)
64 1j32_A Aspartate aminotransfer 99.8 5.5E-19 1.9E-23 161.7 13.3 247 3-304 131-387 (388)
65 2cb1_A O-acetyl homoserine sul 99.8 6.8E-18 2.3E-22 156.2 20.3 243 5-299 118-411 (412)
66 3a9z_A Selenocysteine lyase; P 99.8 7.9E-19 2.7E-23 163.0 14.0 247 6-306 147-430 (432)
67 2bwn_A 5-aminolevulinate synth 99.8 3.5E-18 1.2E-22 157.1 17.9 240 5-303 151-399 (401)
68 3a2b_A Serine palmitoyltransfe 99.8 5E-18 1.7E-22 155.9 18.9 240 4-304 145-392 (398)
69 2vi8_A Serine hydroxymethyltra 99.8 4.6E-18 1.6E-22 156.3 18.7 238 13-304 138-387 (405)
70 3kki_A CAI-1 autoinducer synth 99.8 1.5E-17 5.1E-22 153.5 21.7 224 26-303 173-403 (409)
71 3ftb_A Histidinol-phosphate am 99.8 7.4E-18 2.5E-22 152.5 19.3 235 4-303 116-360 (361)
72 3nra_A Aspartate aminotransfer 99.8 4.9E-19 1.7E-23 162.8 11.4 247 3-305 143-406 (407)
73 3euc_A Histidinol-phosphate am 99.8 6.1E-18 2.1E-22 153.6 18.4 230 4-301 127-365 (367)
74 3l8a_A METC, putative aminotra 99.8 1.9E-18 6.5E-23 160.2 15.1 247 5-302 162-420 (421)
75 1c7n_A Cystalysin; transferase 99.8 2.2E-18 7.5E-23 158.3 15.3 251 4-306 131-395 (399)
76 3ffh_A Histidinol-phosphate am 99.8 9.4E-18 3.2E-22 152.1 19.0 233 3-300 125-362 (363)
77 1bs0_A Protein (8-amino-7-oxon 99.8 6.5E-18 2.2E-22 154.3 17.8 235 5-300 142-383 (384)
78 1xi9_A Putative transaminase; 99.8 2.4E-18 8.1E-23 158.7 15.0 246 3-305 142-404 (406)
79 3uwc_A Nucleotide-sugar aminot 99.8 2.3E-18 7.8E-23 156.7 14.5 246 3-303 95-370 (374)
80 1c4k_A Protein (ornithine deca 99.8 6E-18 2E-22 166.2 18.3 271 3-304 231-566 (730)
81 2gb3_A Aspartate aminotransfer 99.8 2.4E-18 8.1E-23 158.9 13.9 246 3-307 143-405 (409)
82 3frk_A QDTB; aminotransferase, 99.8 1E-18 3.4E-23 159.3 11.2 243 4-301 94-365 (373)
83 4dq6_A Putative pyridoxal phos 99.8 2.6E-18 9E-23 157.0 13.5 245 3-301 131-390 (391)
84 3ly1_A Putative histidinol-pho 99.8 1E-17 3.5E-22 151.3 17.0 236 3-302 109-350 (354)
85 1bw0_A TAT, protein (tyrosine 99.8 1.5E-17 5E-22 153.7 17.8 257 3-305 145-414 (416)
86 3dr4_A Putative perosamine syn 99.8 1.2E-18 4E-23 159.8 10.3 250 3-300 113-389 (391)
87 2c0r_A PSAT, phosphoserine ami 99.8 2.8E-18 9.5E-23 155.6 12.6 235 13-303 117-360 (362)
88 1cs1_A CGS, protein (cystathio 99.8 4E-17 1.4E-21 149.5 20.4 224 5-300 114-383 (386)
89 1w23_A Phosphoserine aminotran 99.8 1E-18 3.4E-23 158.2 9.5 236 13-303 116-359 (360)
90 3op7_A Aminotransferase class 99.8 2.3E-18 7.8E-23 156.9 11.9 244 4-305 123-372 (375)
91 3g0t_A Putative aminotransfera 99.8 5.9E-18 2E-22 157.3 14.8 258 3-302 150-435 (437)
92 2c81_A Glutamine-2-deoxy-scyll 99.8 1E-17 3.4E-22 155.1 15.8 262 4-304 100-414 (418)
93 1gc0_A Methionine gamma-lyase; 99.8 2.4E-17 8.3E-22 151.8 18.3 227 4-300 126-397 (398)
94 1d2f_A MALY protein; aminotran 99.8 2.1E-17 7.2E-22 151.3 17.4 247 4-304 129-389 (390)
95 3gbx_A Serine hydroxymethyltra 99.8 1.1E-17 3.6E-22 154.5 15.0 236 14-303 146-395 (420)
96 3n0l_A Serine hydroxymethyltra 99.8 3.3E-17 1.1E-21 151.1 18.2 237 13-303 140-388 (417)
97 3kax_A Aminotransferase, class 99.8 8.6E-18 2.9E-22 153.2 13.8 243 3-301 123-382 (383)
98 1o4s_A Aspartate aminotransfer 99.7 8.5E-18 2.9E-22 154.1 13.8 237 4-301 143-386 (389)
99 2fyf_A PSAT, phosphoserine ami 99.7 2.1E-18 7.2E-23 158.7 9.6 240 12-303 146-397 (398)
100 3ecd_A Serine hydroxymethyltra 99.7 3.1E-17 1E-21 151.6 17.4 240 13-304 147-397 (425)
101 2oga_A Transaminase; PLP-depen 99.7 3.1E-17 1.1E-21 150.9 17.2 248 3-304 120-396 (399)
102 1gd9_A Aspartate aminotransfer 99.7 1.1E-17 3.7E-22 153.1 13.4 246 3-303 128-385 (389)
103 3qhx_A Cystathionine gamma-syn 99.7 5.3E-17 1.8E-21 149.3 18.0 226 4-297 127-391 (392)
104 1o69_A Aminotransferase; struc 99.7 3.7E-17 1.3E-21 150.2 16.9 266 4-302 90-385 (394)
105 2x3l_A ORN/Lys/Arg decarboxyla 99.7 4.5E-18 1.5E-22 159.1 10.9 234 3-304 113-353 (446)
106 1pff_A Methionine gamma-lyase; 99.7 9.4E-18 3.2E-22 150.3 12.5 103 6-131 61-166 (331)
107 2zc0_A Alanine glyoxylate tran 99.7 1.6E-17 5.5E-22 152.9 14.3 250 4-305 140-405 (407)
108 3get_A Histidinol-phosphate am 99.7 5.6E-17 1.9E-21 147.1 17.6 232 3-301 123-364 (365)
109 2zyj_A Alpha-aminodipate amino 99.7 1.2E-17 4E-22 153.5 13.2 245 4-305 133-394 (397)
110 1qgn_A Protein (cystathionine 99.7 3.6E-17 1.2E-21 152.6 16.3 176 3-224 174-368 (445)
111 3cq5_A Histidinol-phosphate am 99.7 2.3E-16 7.7E-21 143.5 21.1 229 4-301 134-365 (369)
112 1mdo_A ARNB aminotransferase; 99.7 3.6E-17 1.2E-21 149.7 15.8 256 3-303 96-385 (393)
113 1e5e_A MGL, methionine gamma-l 99.7 1.2E-16 4E-21 147.6 19.1 228 3-305 122-396 (404)
114 1v2d_A Glutamine aminotransfer 99.7 1E-17 3.6E-22 152.9 11.5 243 3-306 119-373 (381)
115 1lc5_A COBD, L-threonine-O-3-p 99.7 3.2E-17 1.1E-21 148.8 13.9 237 4-304 116-360 (364)
116 1vp4_A Aminotransferase, putat 99.7 9.2E-17 3.1E-21 149.0 17.2 253 4-307 151-421 (425)
117 2rfv_A Methionine gamma-lyase; 99.7 4.1E-17 1.4E-21 150.1 14.6 229 4-300 125-396 (398)
118 3h7f_A Serine hydroxymethyltra 99.7 3E-16 1E-20 146.7 20.3 238 13-303 160-413 (447)
119 3h14_A Aminotransferase, class 99.7 2.8E-17 9.5E-22 150.6 12.7 241 3-305 132-383 (391)
120 1yiz_A Kynurenine aminotransfe 99.7 3E-17 1E-21 152.3 13.0 254 4-301 143-426 (429)
121 1jg8_A L-ALLO-threonine aldola 99.7 4.5E-17 1.6E-21 146.6 13.6 240 5-303 99-345 (347)
122 3pj0_A LMO0305 protein; struct 99.7 1.3E-16 4.3E-21 144.4 15.7 236 6-300 112-358 (359)
123 2o0r_A RV0858C (N-succinyldiam 99.7 3E-17 1E-21 151.5 11.7 247 4-304 128-396 (411)
124 1u08_A Hypothetical aminotrans 99.7 7.3E-17 2.5E-21 147.5 14.1 241 4-299 133-385 (386)
125 3fdb_A Beta C-S lyase, putativ 99.7 6E-17 2.1E-21 147.3 13.1 242 3-303 122-375 (377)
126 3lws_A Aromatic amino acid bet 99.7 8.8E-17 3E-21 145.4 14.1 231 13-300 115-355 (357)
127 3ele_A Amino transferase; RER0 99.7 6.5E-17 2.2E-21 148.4 13.1 243 3-305 141-397 (398)
128 2x5f_A Aspartate_tyrosine_phen 99.7 7.2E-16 2.4E-20 143.1 20.3 244 6-304 158-429 (430)
129 3tcm_A Alanine aminotransferas 99.7 9E-16 3.1E-20 145.5 21.2 271 3-308 199-498 (500)
130 3aow_A Putative uncharacterize 99.7 4.5E-16 1.5E-20 145.5 18.8 253 4-306 182-447 (448)
131 3cog_A Cystathionine gamma-lya 99.7 2.7E-16 9.4E-21 145.1 17.1 158 4-207 127-287 (403)
132 2fq6_A Cystathionine beta-lyas 99.7 2E-16 6.9E-21 146.4 15.4 227 5-299 144-413 (415)
133 2po3_A 4-dehydrase; external a 99.7 3.9E-16 1.3E-20 144.7 17.4 251 3-304 107-386 (424)
134 3fvs_A Kynurenine--oxoglutarat 99.7 1.4E-16 5E-21 147.2 14.1 257 4-302 133-420 (422)
135 1fg7_A Histidinol phosphate am 99.7 8E-16 2.7E-20 139.4 18.7 228 4-300 118-354 (356)
136 2ez2_A Beta-tyrosinase, tyrosi 99.7 5.2E-16 1.8E-20 145.1 17.6 258 4-304 131-431 (456)
137 1n8p_A Cystathionine gamma-lya 99.7 3.1E-16 1E-20 144.3 15.3 228 4-301 115-392 (393)
138 2x5d_A Probable aminotransfera 99.7 1.1E-16 3.8E-21 147.8 12.1 248 4-304 141-398 (412)
139 1b5p_A Protein (aspartate amin 99.7 1.4E-16 5E-21 145.7 12.7 242 4-301 133-382 (385)
140 1ax4_A Tryptophanase; tryptoph 99.7 1.8E-16 6.2E-21 148.6 12.8 245 24-304 165-441 (467)
141 2ctz_A O-acetyl-L-homoserine s 99.7 1.7E-15 5.7E-20 140.5 18.8 196 4-224 119-346 (421)
142 2dou_A Probable N-succinyldiam 99.7 2.3E-16 8E-21 143.6 12.8 237 4-300 129-374 (376)
143 3p1t_A Putative histidinol-pho 99.7 6.5E-16 2.2E-20 138.4 15.5 226 3-301 107-334 (337)
144 3ju7_A Putative PLP-dependent 99.7 1.5E-16 5E-21 145.6 11.1 250 4-303 96-374 (377)
145 2o1b_A Aminotransferase, class 99.7 1.6E-16 5.4E-21 146.5 11.2 240 4-302 151-401 (404)
146 3ruy_A Ornithine aminotransfer 99.7 2E-15 6.9E-20 138.2 18.5 214 27-301 171-391 (392)
147 2z61_A Probable aspartate amin 99.7 2.5E-16 8.6E-21 143.1 12.2 216 26-301 142-368 (370)
148 3b8x_A WBDK, pyridoxamine 5-ph 99.7 2E-15 6.9E-20 138.2 18.3 251 4-297 98-389 (390)
149 1vef_A Acetylornithine/acetyl- 99.7 2.7E-15 9.1E-20 137.5 18.5 215 26-301 173-394 (395)
150 2eh6_A Acoat, acetylornithine 99.7 1.6E-15 5.4E-20 137.9 16.6 211 26-300 160-374 (375)
151 3if2_A Aminotransferase; YP_26 99.7 9.5E-16 3.2E-20 142.8 15.4 246 13-306 175-442 (444)
152 3acz_A Methionine gamma-lyase; 99.7 2.3E-15 7.9E-20 138.1 17.7 159 4-208 120-280 (389)
153 2oqx_A Tryptophanase; lyase, p 99.7 8.7E-16 3E-20 143.9 14.9 241 24-305 165-443 (467)
154 1sff_A 4-aminobutyrate aminotr 99.7 2.4E-14 8.4E-19 132.3 23.5 248 13-304 166-424 (426)
155 3jtx_A Aminotransferase; NP_28 99.7 9.4E-16 3.2E-20 140.4 13.6 238 3-301 137-395 (396)
156 3hdo_A Histidinol-phosphate am 99.7 7.2E-16 2.5E-20 139.7 12.7 228 4-302 124-353 (360)
157 3nyt_A Aminotransferase WBPE; 99.7 2.5E-16 8.6E-21 143.2 9.6 242 3-300 92-360 (367)
158 1ibj_A CBL, cystathionine beta 99.6 2.8E-16 9.5E-21 147.5 9.6 105 3-130 192-298 (464)
159 3ri6_A O-acetylhomoserine sulf 99.6 4E-15 1.4E-19 138.3 17.3 186 4-224 143-356 (430)
160 3ihj_A Alanine aminotransferas 99.6 5.8E-15 2E-19 139.8 17.8 264 3-307 198-496 (498)
161 1s0a_A Adenosylmethionine-8-am 99.6 9.7E-15 3.3E-19 135.4 19.0 240 13-305 172-425 (429)
162 2r2n_A Kynurenine/alpha-aminoa 99.6 6.2E-15 2.1E-19 136.7 17.4 252 3-303 149-423 (425)
163 3ezs_A Aminotransferase ASPB; 99.6 1.1E-15 3.8E-20 139.0 11.5 234 4-303 126-374 (376)
164 3nmy_A Xometc, cystathionine g 99.6 1.2E-14 4.2E-19 133.8 18.2 173 6-224 130-322 (400)
165 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.6 3E-15 1E-19 139.3 14.2 257 4-302 128-434 (437)
166 3e2y_A Kynurenine-oxoglutarate 99.6 1.5E-15 5E-20 139.8 11.4 252 4-299 127-408 (410)
167 3b46_A Aminotransferase BNA3; 99.6 5.2E-16 1.8E-20 145.0 7.5 257 4-299 160-442 (447)
168 3i16_A Aluminum resistance pro 99.6 2.6E-14 8.8E-19 132.5 18.7 183 4-224 145-341 (427)
169 3jzl_A Putative cystathionine 99.6 1.2E-14 4.3E-19 134.0 16.5 181 4-224 130-324 (409)
170 3rq1_A Aminotransferase class 99.6 1.7E-14 5.7E-19 133.3 17.3 247 3-304 143-415 (418)
171 3nx3_A Acoat, acetylornithine 99.6 1.6E-14 5.5E-19 132.4 16.3 218 27-302 168-393 (395)
172 3ndn_A O-succinylhomoserine su 99.6 2.1E-14 7.3E-19 132.8 17.0 173 6-224 144-335 (414)
173 3b1d_A Betac-S lyase; HET: PLP 99.4 6.7E-17 2.3E-21 148.2 0.0 249 3-302 130-391 (392)
174 3ez1_A Aminotransferase MOCR f 99.6 1E-14 3.4E-19 135.0 14.6 247 4-305 142-416 (423)
175 3n75_A LDC, lysine decarboxyla 99.6 1.4E-14 4.9E-19 141.3 15.2 182 4-212 253-456 (715)
176 3qgu_A LL-diaminopimelate amin 99.6 2.9E-14 9.9E-19 133.0 16.6 231 13-303 189-439 (449)
177 3d6k_A Putative aminotransfera 99.6 1.2E-14 4.2E-19 134.6 13.7 243 4-306 149-420 (422)
178 3ppl_A Aspartate aminotransfer 99.6 5.5E-15 1.9E-19 137.0 11.2 244 3-305 150-421 (427)
179 2ord_A Acoat, acetylornithine 99.6 1.7E-14 5.9E-19 132.3 14.1 216 27-302 172-395 (397)
180 1z7d_A Ornithine aminotransfer 99.6 8.1E-14 2.8E-18 129.7 18.6 222 27-305 200-430 (433)
181 2eo5_A 419AA long hypothetical 99.6 2.4E-13 8.4E-18 125.7 21.8 219 26-304 194-418 (419)
182 2aeu_A Hypothetical protein MJ 99.6 7.6E-15 2.6E-19 134.0 11.3 232 27-306 130-373 (374)
183 3g7q_A Valine-pyruvate aminotr 99.6 1.1E-14 3.8E-19 134.2 12.4 231 24-306 168-415 (417)
184 1zod_A DGD, 2,2-dialkylglycine 99.6 3.9E-14 1.3E-18 131.4 15.7 238 26-304 187-432 (433)
185 3f6t_A Aspartate aminotransfer 99.6 5.2E-14 1.8E-18 134.4 16.8 276 3-307 210-528 (533)
186 2cjg_A L-lysine-epsilon aminot 99.6 1.8E-13 6.3E-18 127.8 19.9 224 26-304 216-448 (449)
187 2pb2_A Acetylornithine/succiny 99.6 2.7E-14 9.3E-19 132.3 14.0 221 27-304 190-418 (420)
188 3hvy_A Cystathionine beta-lyas 99.6 1.6E-13 5.5E-18 127.1 18.8 180 5-224 147-341 (427)
189 3fkd_A L-threonine-O-3-phospha 99.6 5.9E-14 2E-18 126.5 15.4 228 3-303 106-341 (350)
190 3dxv_A Alpha-amino-epsilon-cap 99.6 3.3E-13 1.1E-17 125.4 20.3 232 27-304 186-425 (439)
191 1ohv_A 4-aminobutyrate aminotr 99.5 5.2E-13 1.8E-17 125.6 21.5 220 27-303 241-470 (472)
192 3t18_A Aminotransferase class 99.5 1.5E-13 5.2E-18 126.6 17.1 242 3-304 142-410 (413)
193 3a8u_X Omega-amino acid--pyruv 99.5 8.8E-13 3E-17 123.0 22.5 235 28-304 205-447 (449)
194 3i5t_A Aminotransferase; pyrid 99.5 1.1E-12 3.9E-17 123.3 23.2 237 28-306 207-456 (476)
195 3gju_A Putative aminotransfera 99.5 4.5E-13 1.6E-17 125.5 20.1 242 28-306 207-458 (460)
196 4adb_A Succinylornithine trans 99.5 8.7E-14 3E-18 127.7 14.9 224 26-306 171-402 (406)
197 2oat_A Ornithine aminotransfer 99.5 2.8E-13 9.4E-18 126.3 18.2 220 27-302 211-437 (439)
198 3n5m_A Adenosylmethionine-8-am 99.5 1.6E-12 5.4E-17 121.4 23.3 232 28-302 201-450 (452)
199 3hmu_A Aminotransferase, class 99.5 6.8E-13 2.3E-17 124.8 20.8 236 28-305 209-453 (472)
200 3fsl_A Aromatic-amino-acid ami 99.5 1.3E-14 4.5E-19 132.8 8.4 237 4-300 139-396 (397)
201 3i4j_A Aminotransferase, class 99.5 1.1E-12 3.8E-17 121.6 20.9 241 25-304 173-428 (430)
202 3l44_A Glutamate-1-semialdehyd 99.5 3.7E-13 1.3E-17 124.9 17.6 236 27-306 188-432 (434)
203 3ou5_A Serine hydroxymethyltra 99.5 1.1E-12 3.6E-17 119.9 20.0 247 15-302 180-439 (490)
204 3tfu_A Adenosylmethionine-8-am 99.5 4.1E-13 1.4E-17 125.8 17.6 238 13-304 205-453 (457)
205 1uu1_A Histidinol-phosphate am 99.5 1.6E-13 5.6E-18 122.9 14.0 220 4-300 114-334 (335)
206 4f4e_A Aromatic-amino-acid ami 99.5 2.9E-14 9.9E-19 131.9 9.3 242 3-301 160-419 (420)
207 3ei9_A LL-diaminopimelate amin 99.5 1.6E-13 5.5E-18 127.3 14.2 231 12-301 177-425 (432)
208 2ay1_A Aroat, aromatic amino a 99.5 2E-14 6.8E-19 131.6 7.7 239 4-300 135-392 (394)
209 1ajs_A Aspartate aminotransfer 99.5 1.5E-13 5.3E-18 126.5 13.6 236 13-303 155-410 (412)
210 1yaa_A Aspartate aminotransfer 99.5 3.5E-14 1.2E-18 130.8 9.1 237 4-303 142-410 (412)
211 4eu1_A Mitochondrial aspartate 99.5 8.9E-14 3.1E-18 128.1 11.2 237 4-301 149-408 (409)
212 4a6r_A Omega transaminase; tra 99.5 2.2E-12 7.6E-17 120.7 20.4 236 28-305 205-450 (459)
213 3dod_A Adenosylmethionine-8-am 99.5 4.9E-12 1.7E-16 118.0 22.0 237 27-306 196-445 (448)
214 4ffc_A 4-aminobutyrate aminotr 99.5 1.9E-12 6.5E-17 121.1 19.1 218 45-306 226-451 (453)
215 3k28_A Glutamate-1-semialdehyd 99.5 4.8E-13 1.6E-17 124.1 14.9 230 27-304 186-427 (429)
216 3ht4_A Aluminum resistance pro 99.5 5.2E-13 1.8E-17 124.1 15.0 177 5-223 137-329 (431)
217 3asa_A LL-diaminopimelate amin 99.5 5.9E-14 2E-18 128.9 8.5 232 13-303 143-392 (400)
218 7aat_A Aspartate aminotransfer 99.5 1.3E-13 4.6E-18 126.4 9.9 237 4-301 141-400 (401)
219 3meb_A Aspartate aminotransfer 99.5 3.2E-13 1.1E-17 126.1 12.2 237 5-304 168-444 (448)
220 3oks_A 4-aminobutyrate transam 99.5 8.5E-12 2.9E-16 116.6 21.8 231 27-302 211-449 (451)
221 2epj_A Glutamate-1-semialdehyd 99.5 2.2E-12 7.6E-17 119.7 17.5 237 26-305 188-432 (434)
222 2q7w_A Aspartate aminotransfer 99.4 7.8E-14 2.7E-18 127.6 6.8 237 4-300 138-395 (396)
223 2cy8_A D-phgat, D-phenylglycin 99.4 4.1E-12 1.4E-16 118.6 17.6 234 26-305 186-436 (453)
224 3fq8_A Glutamate-1-semialdehyd 99.4 2.4E-12 8.2E-17 119.2 15.2 235 27-303 185-426 (427)
225 4e77_A Glutamate-1-semialdehyd 99.4 2.1E-12 7.1E-17 119.8 14.1 233 27-302 186-427 (429)
226 2zy4_A L-aspartate beta-decarb 99.3 1.1E-11 3.7E-16 118.6 14.8 271 13-306 220-524 (546)
227 2e7u_A Glutamate-1-semialdehyd 99.3 5E-11 1.7E-15 110.2 15.6 232 26-300 184-423 (424)
228 3bwn_A AT1G70560, L-tryptophan 99.2 6.5E-11 2.2E-15 108.5 10.4 226 4-303 137-386 (391)
229 4ao9_A Beta-phenylalanine amin 99.2 2.3E-09 7.8E-14 99.8 19.0 233 26-305 205-447 (454)
230 4atq_A 4-aminobutyrate transam 99.1 5E-09 1.7E-13 97.7 19.0 234 27-303 207-454 (456)
231 3k7y_A Aspartate aminotransfer 99.1 2.2E-10 7.7E-15 105.5 9.6 237 3-303 139-404 (405)
232 2yky_A Beta-transaminase; tran 98.6 1.6E-11 5.4E-16 114.9 0.0 235 26-306 218-462 (465)
233 4e3q_A Pyruvate transaminase; 99.0 1.5E-08 5.2E-13 94.9 19.4 241 29-307 223-471 (473)
234 4h51_A Aspartate aminotransfer 98.8 9.2E-08 3.2E-12 88.3 14.7 230 13-305 162-418 (420)
235 2hox_A ALLIIN lyase 1; cystein 98.8 6.3E-09 2.1E-13 96.4 6.6 212 25-301 183-422 (427)
236 4a0g_A Adenosylmethionine-8-am 98.8 9.7E-09 3.3E-13 102.4 7.8 235 29-304 577-828 (831)
237 1tks_A 3,4-dihydroxy-2-butanon 69.7 9.7 0.00033 30.7 5.9 51 28-78 143-193 (204)
238 4gqr_A Pancreatic alpha-amylas 66.8 2.5 8.5E-05 38.7 2.2 30 53-82 69-98 (496)
239 3bh4_A Alpha-amylase; calcium, 61.1 3.8 0.00013 37.8 2.3 29 54-82 72-100 (483)
240 1g94_A Alpha-amylase; beta-alp 60.6 3.7 0.00013 37.5 2.1 29 54-82 58-86 (448)
241 1ud2_A Amylase, alpha-amylase; 59.8 4.2 0.00014 37.4 2.4 28 55-82 75-102 (480)
242 1hvx_A Alpha-amylase; hydrolas 59.6 4.3 0.00015 37.8 2.4 28 55-82 76-103 (515)
243 1wpc_A Glucan 1,4-alpha-maltoh 59.4 4.3 0.00015 37.4 2.4 28 55-82 77-104 (485)
244 1mxg_A Alpha amylase; hyperthe 59.3 4.4 0.00015 36.9 2.4 28 55-82 81-108 (435)
245 3mio_A DHBP synthase, 3,4-dihy 58.0 29 0.001 28.0 6.7 52 27-78 141-193 (206)
246 3kts_A Glycerol uptake operon 57.0 4.4 0.00015 32.5 1.7 49 27-86 18-68 (192)
247 1lwj_A 4-alpha-glucanotransfer 57.0 5.1 0.00017 36.4 2.4 58 25-82 19-91 (441)
248 3dhu_A Alpha-amylase; structur 55.6 4.9 0.00017 36.6 2.0 27 56-82 79-105 (449)
249 2guy_A Alpha-amylase A; (beta- 55.4 5.6 0.00019 36.5 2.4 28 55-82 92-119 (478)
250 1gcy_A Glucan 1,4-alpha-maltot 53.6 5.7 0.00019 37.1 2.2 28 55-82 87-114 (527)
251 1g57_A DHBP synthase, 3,4-dihy 53.6 33 0.0011 27.9 6.4 50 28-78 151-200 (217)
252 1ht6_A AMY1, alpha-amylase iso 53.3 5.6 0.00019 35.7 2.0 29 55-83 63-91 (405)
253 1snn_A DHBP synthase, 3,4-dihy 52.3 35 0.0012 28.0 6.4 51 27-78 161-211 (227)
254 4aie_A Glucan 1,6-alpha-glucos 52.2 6.8 0.00023 36.4 2.5 26 57-82 76-101 (549)
255 1wza_A Alpha-amylase A; hydrol 51.5 5.9 0.0002 36.5 1.9 28 55-82 76-103 (488)
256 2dh2_A 4F2 cell-surface antige 50.8 7.4 0.00025 35.2 2.4 56 27-82 34-103 (424)
257 2z1k_A (NEO)pullulanase; hydro 50.5 9.1 0.00031 35.0 3.0 56 27-82 48-118 (475)
258 1zco_A 2-dehydro-3-deoxyphosph 50.0 47 0.0016 27.8 7.1 62 26-87 141-205 (262)
259 2aaa_A Alpha-amylase; glycosid 49.9 7 0.00024 35.9 2.1 28 55-82 92-119 (484)
260 1jae_A Alpha-amylase; glycosid 49.8 5.1 0.00017 36.8 1.2 28 55-82 69-96 (471)
261 3bc9_A AMYB, alpha amylase, ca 49.5 7.5 0.00026 37.0 2.3 28 55-82 203-230 (599)
262 1j0h_A Neopullulanase; beta-al 48.2 7.5 0.00026 36.9 2.1 57 27-83 174-245 (588)
263 3dz1_A Dihydrodipicolinate syn 48.0 21 0.00073 30.8 4.8 58 22-79 22-81 (313)
264 2wc7_A Alpha amylase, catalyti 47.6 7.3 0.00025 35.9 1.9 56 27-82 54-124 (488)
265 3edf_A FSPCMD, cyclomaltodextr 47.5 8.9 0.0003 36.5 2.5 57 26-82 145-220 (601)
266 1m53_A Isomaltulose synthase; 47.4 7.1 0.00024 36.8 1.8 58 25-82 41-114 (570)
267 1f6k_A N-acetylneuraminate lya 47.2 27 0.00094 29.7 5.4 57 23-79 18-78 (293)
268 1zja_A Trehalulose synthase; s 47.0 8.9 0.00031 36.0 2.4 58 25-82 28-101 (557)
269 3l21_A DHDPS, dihydrodipicolin 46.5 28 0.00095 29.9 5.3 58 22-79 29-89 (304)
270 1wzl_A Alpha-amylase II; pullu 46.3 7.5 0.00026 36.8 1.7 56 27-82 171-241 (585)
271 1ua7_A Alpha-amylase; beta-alp 46.2 5.7 0.0002 35.9 0.9 28 55-82 69-96 (422)
272 1uok_A Oligo-1,6-glucosidase; 45.8 9 0.00031 36.0 2.2 28 55-82 73-100 (558)
273 1d3c_A Cyclodextrin glycosyltr 45.7 9.7 0.00033 36.8 2.5 28 55-82 110-137 (686)
274 1ea9_C Cyclomaltodextrinase; h 45.6 8.2 0.00028 36.5 1.9 56 27-83 170-241 (583)
275 1qho_A Alpha-amylase; glycosid 45.2 9.8 0.00033 36.8 2.4 28 55-82 102-129 (686)
276 1cyg_A Cyclodextrin glucanotra 45.1 9.8 0.00034 36.8 2.4 28 55-82 106-133 (680)
277 2ze0_A Alpha-glucosidase; TIM 44.8 9.1 0.00031 35.9 2.1 58 25-82 27-100 (555)
278 2wkj_A N-acetylneuraminate lya 44.3 31 0.0011 29.5 5.3 57 23-79 26-85 (303)
279 4aef_A Neopullulanase (alpha-a 44.2 10 0.00034 36.4 2.3 56 27-82 237-307 (645)
280 3cpr_A Dihydrodipicolinate syn 43.9 34 0.0012 29.3 5.5 57 23-79 31-90 (304)
281 2llz_A Uncharacterized protein 43.6 27 0.00094 24.4 3.8 63 215-299 11-77 (100)
282 1g5a_A Amylosucrase; glycosylt 43.5 10 0.00036 36.2 2.3 27 56-82 158-184 (628)
283 3flu_A DHDPS, dihydrodipicolin 43.5 29 0.00098 29.6 4.9 57 23-79 22-81 (297)
284 2zic_A Dextran glucosidase; TI 43.5 9.3 0.00032 35.8 1.9 58 25-82 27-100 (543)
285 4aee_A Alpha amylase, catalyti 43.3 13 0.00045 36.0 3.0 57 26-82 262-333 (696)
286 3bmv_A Cyclomaltodextrin gluca 43.2 11 0.00038 36.4 2.5 28 55-82 111-138 (683)
287 3fkr_A L-2-keto-3-deoxyarabona 42.9 28 0.00096 29.9 4.8 57 23-79 23-82 (309)
288 3aj7_A Oligo-1,6-glucosidase; 42.7 11 0.00039 35.6 2.4 58 25-82 36-109 (589)
289 3vup_A Beta-1,4-mannanase; TIM 42.2 28 0.00096 29.2 4.7 57 25-81 38-110 (351)
290 3czg_A Sucrose hydrolase; (alp 42.2 10 0.00036 36.3 2.1 26 57-82 152-177 (644)
291 3zss_A Putative glucanohydrola 41.5 12 0.0004 36.4 2.3 28 56-83 316-343 (695)
292 1xky_A Dihydrodipicolinate syn 41.2 35 0.0012 29.2 5.1 56 23-78 27-85 (301)
293 1x7f_A Outer surface protein; 41.2 32 0.0011 30.6 4.9 60 27-86 39-99 (385)
294 2nly_A BH1492 protein, diverge 40.9 39 0.0013 28.1 5.1 57 25-82 79-135 (245)
295 1m7x_A 1,4-alpha-glucan branch 40.7 11 0.00037 36.0 1.9 27 56-82 200-226 (617)
296 2bhu_A Maltooligosyltrehalose 39.2 12 0.0004 35.7 1.9 27 56-82 188-214 (602)
297 3vgf_A Malto-oligosyltrehalose 39.0 11 0.00036 35.6 1.5 29 55-83 162-190 (558)
298 3ghf_A Septum site-determining 39.0 55 0.0019 23.8 5.1 49 26-78 25-78 (120)
299 3qze_A DHDPS, dihydrodipicolin 38.9 30 0.001 29.8 4.3 57 23-79 38-97 (314)
300 1vr6_A Phospho-2-dehydro-3-deo 38.9 54 0.0019 28.8 6.0 61 26-87 224-288 (350)
301 3h5d_A DHDPS, dihydrodipicolin 38.1 30 0.001 29.8 4.1 58 22-79 21-81 (311)
302 3s5o_A 4-hydroxy-2-oxoglutarat 37.7 23 0.0008 30.4 3.4 57 23-79 29-88 (307)
303 3nvt_A 3-deoxy-D-arabino-heptu 37.4 68 0.0023 28.5 6.5 61 26-86 260-323 (385)
304 3m07_A Putative alpha amylase; 37.0 16 0.00055 34.8 2.5 28 55-82 197-224 (618)
305 3m5v_A DHDPS, dihydrodipicolin 36.2 26 0.00089 30.0 3.5 57 23-79 22-82 (301)
306 3na8_A Putative dihydrodipicol 35.8 27 0.00093 30.1 3.5 58 22-79 38-98 (315)
307 3k1d_A 1,4-alpha-glucan-branch 35.6 16 0.00056 35.5 2.3 28 55-82 307-334 (722)
308 3ucq_A Amylosucrase; thermosta 35.5 21 0.00071 34.3 3.0 30 53-82 153-182 (655)
309 4hti_A Receptor-type tyrosine- 35.2 1.1E+02 0.0039 21.3 7.7 59 245-303 25-83 (99)
310 1vs1_A 3-deoxy-7-phosphoheptul 35.1 93 0.0032 26.2 6.7 63 25-87 155-220 (276)
311 2r8w_A AGR_C_1641P; APC7498, d 35.1 42 0.0014 29.2 4.7 57 23-79 49-108 (332)
312 1k4i_A 3,4-dihydroxy-2-butanon 34.4 78 0.0027 26.0 5.8 50 29-78 152-211 (233)
313 3aml_A OS06G0726400 protein; s 34.1 18 0.00061 35.5 2.3 29 55-83 245-273 (755)
314 4dpp_A DHDPS 2, dihydrodipicol 33.8 56 0.0019 28.8 5.3 58 22-79 73-133 (360)
315 2qv5_A AGR_C_5032P, uncharacte 33.6 63 0.0021 27.1 5.3 55 26-81 107-161 (261)
316 2hmc_A AGR_L_411P, dihydrodipi 33.6 47 0.0016 29.0 4.7 56 23-78 41-96 (344)
317 2v9d_A YAGE; dihydrodipicolini 33.5 46 0.0016 29.1 4.7 57 23-79 46-105 (343)
318 3b4u_A Dihydrodipicolinate syn 33.2 36 0.0012 28.9 3.9 51 23-73 18-68 (294)
319 3si9_A DHDPS, dihydrodipicolin 33.2 31 0.001 29.8 3.4 57 23-79 37-96 (315)
320 1iv8_A Maltooligosyl trehalose 33.1 23 0.00078 34.4 2.8 30 53-82 58-87 (720)
321 2p0o_A Hypothetical protein DU 31.9 57 0.0019 28.9 4.9 57 28-84 16-73 (372)
322 3k8k_A Alpha-amylase, SUSG; al 31.8 20 0.00069 34.5 2.2 57 25-82 56-128 (669)
323 1ji1_A Alpha-amylase I; beta/a 31.7 16 0.00055 34.9 1.5 56 27-83 189-265 (637)
324 3aie_A Glucosyltransferase-SI; 31.4 20 0.00069 35.5 2.2 29 55-83 687-715 (844)
325 2ojp_A DHDPS, dihydrodipicolin 30.8 37 0.0013 28.9 3.5 56 23-78 16-74 (292)
326 3qfe_A Putative dihydrodipicol 30.6 33 0.0011 29.7 3.2 57 23-79 26-85 (318)
327 3tak_A DHDPS, dihydrodipicolin 30.3 38 0.0013 28.8 3.5 57 23-79 16-75 (291)
328 2ki0_A DS119; beta-alpha-beta, 30.1 14 0.00047 19.7 0.4 22 56-77 10-31 (36)
329 1w3i_A EDA, 2-keto-3-deoxy glu 30.0 39 0.0013 28.7 3.6 51 23-73 14-64 (293)
330 3sz8_A 2-dehydro-3-deoxyphosph 30.0 80 0.0027 26.8 5.4 57 26-84 145-205 (285)
331 2nuw_A 2-keto-3-deoxygluconate 29.6 35 0.0012 28.9 3.2 51 23-73 14-64 (288)
332 4a1f_A DNAB helicase, replicat 29.4 1.8E+02 0.0063 25.1 7.8 56 25-80 137-202 (338)
333 3e96_A Dihydrodipicolinate syn 29.2 31 0.0011 29.7 2.8 57 23-79 27-86 (316)
334 3hje_A 704AA long hypothetical 29.0 28 0.00096 33.6 2.6 31 52-82 55-85 (704)
335 3bzy_B ESCU; auto cleavage pro 28.6 32 0.0011 23.3 2.2 20 63-82 29-48 (83)
336 3d0c_A Dihydrodipicolinate syn 28.4 37 0.0013 29.3 3.1 57 23-79 27-86 (314)
337 3kl7_A Putative metal-dependen 28.2 1.1E+02 0.0036 24.8 5.8 55 12-78 176-230 (235)
338 3a5f_A Dihydrodipicolinate syn 27.6 52 0.0018 27.9 3.9 57 21-78 15-74 (291)
339 3ttq_A Dextransucrase; (beta/a 27.0 28 0.00095 35.4 2.2 28 55-82 907-934 (1108)
340 4awe_A Endo-beta-D-1,4-mannana 26.2 1.5E+02 0.0053 24.7 6.9 23 60-82 100-122 (387)
341 1bf2_A Isoamylase; hydrolase, 26.0 28 0.00096 34.0 2.1 24 60-83 272-295 (750)
342 2vr5_A Glycogen operon protein 26.0 25 0.00087 34.1 1.8 23 60-82 266-288 (718)
343 1xpp_A TA1416, DNA-directed RN 25.9 1.9E+02 0.0064 20.8 9.1 83 199-304 6-92 (115)
344 2yxg_A DHDPS, dihydrodipicolin 25.8 62 0.0021 27.3 4.1 56 24-79 16-74 (289)
345 3klk_A Glucansucrase; native f 25.6 30 0.001 35.2 2.2 27 56-82 741-767 (1039)
346 1f6y_A 5-methyltetrahydrofolat 25.5 48 0.0016 27.7 3.2 20 60-79 102-121 (262)
347 2pcq_A Putative dihydrodipicol 25.2 21 0.00071 30.3 0.9 58 17-78 9-66 (283)
348 2e8y_A AMYX protein, pullulana 24.9 22 0.00074 34.6 1.1 23 60-82 315-337 (718)
349 2ehh_A DHDPS, dihydrodipicolin 24.8 52 0.0018 27.9 3.4 56 24-79 16-74 (294)
350 3ff4_A Uncharacterized protein 24.7 62 0.0021 23.5 3.3 18 64-82 95-112 (122)
351 3t7y_A YOP proteins translocat 23.8 43 0.0015 23.4 2.2 20 63-82 44-63 (97)
352 3eb2_A Putative dihydrodipicol 23.7 31 0.0011 29.5 1.7 57 23-79 19-78 (300)
353 3rag_A Uncharacterized protein 23.6 83 0.0028 26.0 4.2 36 45-82 11-46 (242)
354 2wsk_A Glycogen debranching en 23.2 42 0.0014 32.2 2.7 24 59-82 240-263 (657)
355 2ya0_A Putative alkaline amylo 22.9 38 0.0013 32.9 2.3 24 60-83 254-277 (714)
356 3c01_E Surface presentation of 22.3 48 0.0016 23.2 2.2 20 63-82 29-48 (98)
357 3daq_A DHDPS, dihydrodipicolin 22.3 63 0.0022 27.4 3.4 57 22-79 17-76 (292)
358 1qys_A TOP7; alpha-beta, novel 21.9 1.8E+02 0.0061 19.2 5.6 46 246-304 29-74 (106)
359 1gjw_A Maltodextrin glycosyltr 21.6 52 0.0018 31.3 3.0 24 60-83 181-204 (637)
360 3fs2_A 2-dehydro-3-deoxyphosph 21.3 1E+02 0.0035 26.3 4.5 56 26-84 166-224 (298)
361 2vt1_B Surface presentation of 21.2 53 0.0018 22.8 2.2 20 63-82 29-48 (93)
362 2wan_A Pullulanase; hydrolase, 21.1 37 0.0013 34.1 1.9 23 60-82 531-553 (921)
363 2r91_A 2-keto-3-deoxy-(6-phosp 21.0 49 0.0017 28.0 2.4 50 24-73 14-63 (286)
364 3rpc_A Possible metal-dependen 20.6 2.8E+02 0.0094 22.5 7.1 58 13-75 186-249 (264)
365 3ie7_A LIN2199 protein; phosph 20.3 1.7E+02 0.0059 24.5 5.9 57 25-82 114-171 (320)
No 1
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-42 Score=326.84 Aligned_cols=278 Identities=38% Similarity=0.768 Sum_probs=244.4
Q ss_pred CcceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEee
Q 046506 1 KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 1 kaa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD 80 (310)
|++++.|.. ++.||+++ ++.+|+++|+++|++.+..+..|++|++++++|++|.++||++|+++|++||+|+|||
T Consensus 203 ~~~~~~g~~---~~~v~~~~--~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvD 277 (481)
T 4e1o_A 203 KAGLISLVK---MKFLPVDD--NFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHID 277 (481)
T ss_dssp HHHHHHTCE---EEEECCCT--TSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEE
T ss_pred HHHHhCCCc---eEEEEcCC--CCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEee
Confidence 355666776 99999985 4699999999999988777777888999999999999999999999999999999999
Q ss_pred cccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
+||+++.+..+.++....+++.+|++++++||||++|.|+|+++++++..+.+.+...+.|+..... ...+++.++++
T Consensus 278 aA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~--~~~~~~~~~~~ 355 (481)
T 4e1o_A 278 AAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANS--GVATDFMHWQI 355 (481)
T ss_dssp CTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESBHHHHHTTTCCCCGGGCCTTT--TTSCCGGGGSS
T ss_pred hhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEEEeCHHHHHHHhcCCchhccCccc--CCCCCcccccc
Confidence 9999988877777766666667899999999999999999999999998777777777888876532 23457788899
Q ss_pred ccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccc
Q 046506 161 TLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLL 240 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
+++|++.++++|++++.+|.++++++++++.++++++++.|+++|+++++.++..++++|++.+.
T Consensus 356 ~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~--------------- 420 (481)
T 4e1o_A 356 PLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGP--------------- 420 (481)
T ss_dssp SSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEEEESSC---------------
T ss_pred cCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEeCCc---------------
Confidence 99999999999999999999999999999999999999999999999998888899999999764
Q ss_pred hhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 241 SEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 241 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
+..+.++.++|.++|.+++.++.+.+..++|++++++++|++||++++++|+++++++.+
T Consensus 421 ------~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~l~~ 480 (481)
T 4e1o_A 421 ------NSLTENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLILS 480 (481)
T ss_dssp ------HHHHHHHHHHHHHHCSSBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred ------hHHHHHHHHHHHhCCeEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 344568888999999888888888999999999999999999999999999999887653
No 2
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=100.00 E-value=1.7e-42 Score=327.42 Aligned_cols=277 Identities=41% Similarity=0.770 Sum_probs=225.8
Q ss_pred CcceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEee
Q 046506 1 KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 1 kaa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD 80 (310)
|++++.|+. ++.||+++ .+ +|+++|+++|++.+..+..|++|++++++|.+|.++|+++|+++|++||+|+|||
T Consensus 197 ~~~~~~g~~---~~~v~~d~--~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD 270 (475)
T 3k40_A 197 RAGLLGGVK---LRSVQSEN--HR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVD 270 (475)
T ss_dssp HHHHHHTCE---EEEECCBT--TB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHcCCc---eEEEECCC--CC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEe
Confidence 356677886 99999985 47 9999999999998777777888999999999999999999999999999999999
Q ss_pred cccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
+||+++.+..+.++....+++.+|++++++|||+++|.|+|+++++++..+.+.+...+.|+..... ...+++.++++
T Consensus 271 ~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~--~~~~~~~~~~~ 348 (475)
T 3k40_A 271 AAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQ--GSAPDYRHWQI 348 (475)
T ss_dssp CTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSGGGC-----------------------------
T ss_pred HHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCHHHHHHHhcCCccccCCCcC--CCCCCcccccc
Confidence 9999888777766665666667899999999999999999999999987666666667788865432 23456778899
Q ss_pred ccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccc
Q 046506 161 TLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLL 240 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
+++|++.++++|++++.+|.++++++.+++.++++++++.|+++|+++++.++..++++|++.+.
T Consensus 349 ~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f~~~~~--------------- 413 (475)
T 3k40_A 349 PLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGS--------------- 413 (475)
T ss_dssp CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEEEESSC---------------
T ss_pred cCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEeCCc---------------
Confidence 99999999999999999999999999999999999999999999999999888899999999764
Q ss_pred hhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 241 SEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 241 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
+..+.++.++|.++|.+++.++.+.+..++|++++++++|++||++++++|+++++++.+
T Consensus 414 ------~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~~~~ 473 (475)
T 3k40_A 414 ------NERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFTQSEDMEYSWKEVSAAADEMEQ 473 (475)
T ss_dssp ------HHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred ------hHHHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 334568888999999988888989999999999999999999999999999999988754
No 3
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=100.00 E-value=1.7e-40 Score=316.34 Aligned_cols=296 Identities=22% Similarity=0.386 Sum_probs=247.4
Q ss_pred CcceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEee
Q 046506 1 KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 1 kaa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD 80 (310)
|+++++|++..+++.||++++ +.+|+++|+++|++....+..|++|++++++|++|.++||++|+++|++||+|+|||
T Consensus 207 ~~~~~~g~g~~~~~~v~~d~~--~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD 284 (511)
T 3vp6_A 207 KAGAALGFGTDNVILIKCNER--GKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVD 284 (511)
T ss_dssp HHHHHTTSCGGGEEEECBCTT--SCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHcCCCCCcEEEeecCCC--CccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEE
Confidence 456788886556999999864 699999999999988777777889999999999999999999999999999999999
Q ss_pred cccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
+||+++.+..+.++....++.++|++++++||||++|.|||+++++++..+...+...+.|+......+....++.++++
T Consensus 285 ~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 364 (511)
T 3vp6_A 285 AAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAI 364 (511)
T ss_dssp ETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSS
T ss_pred ccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCCC
Confidence 99999998888777666667789999999999999999999999999877777777788898876554445567788899
Q ss_pred ccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEec--CCCceEEEEEEcCCcchhhhhhhhccc
Q 046506 161 TLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVF--PRHFAVVCFRVSPSAVMDKLKTKYENS 238 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~ 238 (310)
+++|++.++++|++++.+|.++++++++++.++++++++.|+++|+++++. +|..++++|++.|..... . ..
T Consensus 365 ~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p~~~~~----~--~~ 438 (511)
T 3vp6_A 365 QCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRG----V--PD 438 (511)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEECCGGGSS----C--CC
T ss_pred CCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccc----c--cc
Confidence 999999999999999999999999999999999999999999999999987 578899999998753210 0 00
Q ss_pred cchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECC-EeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 239 LLSEEERINEFNRELLESINASGKAYMTHAVLGG-IYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.......++..+.++.+.|.++|.+++......+ .+++|++++++.++++||++++++|+++++.+
T Consensus 439 ~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~~~ 505 (511)
T 3vp6_A 439 SPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 505 (511)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 1112223455667899999999987776544444 46899998789999999999999999988765
No 4
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=100.00 E-value=4.3e-40 Score=311.88 Aligned_cols=280 Identities=42% Similarity=0.786 Sum_probs=231.8
Q ss_pred CcceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEee
Q 046506 1 KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 1 kaa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD 80 (310)
|+++++|++ ++.||+++ ++.+|+++|+++|++.++.+..|++|++++++|.+|.++|+++|+++|++||+|+|||
T Consensus 197 ~~~~~~G~~---v~~v~~d~--~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD 271 (486)
T 1js3_A 197 RAGLIGGVK---LKAIPSDG--KFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVD 271 (486)
T ss_dssp HHHHHHTCE---EEEECCCT--TSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHhCCCc---eEEeecCC--CCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEe
Confidence 356778988 99999975 4699999999999998877777889999999999999999999999999999999999
Q ss_pred cccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
+||+++.+..+.++....++.++|++++++|||+++|.|+|+++++++..+.+.+...+.|+...........++..+++
T Consensus 272 ~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 351 (486)
T 1js3_A 272 AAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQL 351 (486)
T ss_dssp CTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESCHHHHHGGGC------------CCSCCCGGGSSS
T ss_pred hhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCccccCC
Confidence 99998887776665545556679999999999999999999999998865556665567777654321123456667788
Q ss_pred ccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccc
Q 046506 161 TLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLL 240 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
+++||+.++++|++++.+|.++++++.+++.++++++.+.|+++|+++++.+|..++++|++.+.
T Consensus 352 ~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~--------------- 416 (486)
T 1js3_A 352 PLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFRLKGS--------------- 416 (486)
T ss_dssp CSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCCCSSEEEEEESSC---------------
T ss_pred CCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCceeEEEEEecCh---------------
Confidence 99999999999999999999999999999999999999999999999998778889999998753
Q ss_pred hhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 241 SEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 241 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
+..+.++.+.|.++|.+++.++.+.+..++|+|++++++|++||++++++|++++.++.+
T Consensus 417 ------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~~~~ 476 (486)
T 1js3_A 417 ------DGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRGLAAELLA 476 (486)
T ss_dssp ------HHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred ------HHHHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 234467888888889877777778888999999888899999999999999999887653
No 5
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=100.00 E-value=3.4e-38 Score=300.17 Aligned_cols=296 Identities=22% Similarity=0.379 Sum_probs=234.7
Q ss_pred CcceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEee
Q 046506 1 KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 1 kaa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD 80 (310)
|+++++|++..+++.||+++ .+.+|+++|+++|++....+..|.+|++++++|.+|.++|+++|+++|++||+|+|||
T Consensus 204 ~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD 281 (504)
T 2okj_A 204 KAGAALGFGTDNVILIKCNE--RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVD 281 (504)
T ss_dssp HHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHcCCCcccEEEEecCC--CCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEe
Confidence 35667777444699999986 4699999999999887665556789999999999999999999999999999999999
Q ss_pred cccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
+|++++.+..+.++....++.++|++++++|||+++|.|+|+++++++..+...+...++|+..........+++.++++
T Consensus 282 ~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 361 (504)
T 2okj_A 282 AAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAI 361 (504)
T ss_dssp ETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSS
T ss_pred hhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCC
Confidence 99999988776655545555579999999999999999999999998766655566667888654332223356777888
Q ss_pred ccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEec--CCCceEEEEEEcCCcchhhhhhhhccc
Q 046506 161 TLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVF--PRHFAVVCFRVSPSAVMDKLKTKYENS 238 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~ 238 (310)
+++||+.++++|++++.++.++++++.++..++++++.+.|+++|+++++. +|..++++|+..+..... ...
T Consensus 362 ~~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~~------~~~ 435 (504)
T 2okj_A 362 QCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRG------VPD 435 (504)
T ss_dssp CSSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGSS------CCC
T ss_pred CCCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccc------ccc
Confidence 999999999999999999999999999999999999999999999999987 477888999886531000 000
Q ss_pred cchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCE-eEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 239 LLSEEERINEFNRELLESINASGKAYMTHAVLGGI-YAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~-~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
...-.+..+..+.++.+.|.++|.+++.++.+.+. +++|+|++++++|++||++++++|+++++++
T Consensus 436 ~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 436 SPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 502 (504)
T ss_dssp CHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC-
T ss_pred chhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 00001112234567888899999877776666664 7999998778999999999999999887654
No 6
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=295.66 Aligned_cols=294 Identities=25% Similarity=0.416 Sum_probs=227.0
Q ss_pred CcceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEee
Q 046506 1 KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 1 kaa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD 80 (310)
|+++++|++..+++.||++++ +.+|+++|+++|++....+..|.+|++++++|.+|.++|+++|+++|++||+|+|||
T Consensus 218 ~~~~~~g~g~~~v~~v~~~~~--~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD 295 (515)
T 2jis_A 218 KGAAFLGLGTDSVRVVKADER--GKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVD 295 (515)
T ss_dssp HHHHHTTSCGGGEEEECBCTT--SCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHcCCCCCcEEEEecCCC--CcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEe
Confidence 356677885446999999864 589999999999887665556789999999999999999999999999999999999
Q ss_pred cccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCc-hhHHhhhccCCccccccccccccccCCCCce
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDP-SDLVNSLSTNPEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~-~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 159 (310)
+|++++.+..+.++....++.++|++++++|||+++|.|+|+++++++ ..+++.+...++|+..........+++..+.
T Consensus 296 ~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 375 (515)
T 2jis_A 296 AAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKV 375 (515)
T ss_dssp ETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGC
T ss_pred hhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCC
Confidence 999999988776655455665799999999999999999999999988 5555556656778755432222334566678
Q ss_pred eccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhcccc
Q 046506 160 ITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSL 239 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 239 (310)
++.+||+.++++|++++.+|.++++++.+++.++++++.+.|+++|+++++.++..++++|++.+.... +. ...
T Consensus 376 ~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~p~~~~----~~--~~~ 449 (515)
T 2jis_A 376 VQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPSLR----GK--QES 449 (515)
T ss_dssp SCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECCGGGT----TC--TTS
T ss_pred CCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEeCcccc----cc--ccc
Confidence 899999999999999999999999999999999999999999999999999877788899988653110 00 000
Q ss_pred chhHHHHHHHHHHHHHHHHhcCcEEEEEeEECC-EeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 240 LSEEERINEFNRELLESINASGKAYMTHAVLGG-IYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 240 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
..-...+...+..+.+.+.+.|.+++..+.+.+ ..++|+|++++++|++||++++++|++++.
T Consensus 450 ~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~ 513 (515)
T 2jis_A 450 PDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQ 513 (515)
T ss_dssp TTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 001122233445678888889987776655555 579999975789999999999999998764
No 7
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.2e-37 Score=295.79 Aligned_cols=279 Identities=24% Similarity=0.407 Sum_probs=219.8
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeec
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
+++++|++..+++.||+++ .+.+|+++|+++|++....+.+|.+|++++++|.+|.++|+++|+++|++||+|+|||+
T Consensus 218 ~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~ 295 (497)
T 2qma_A 218 SASWMGLGEKAVMTVDANA--DGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDG 295 (497)
T ss_dssp HHHHTTSCGGGEEEECBCT--TSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHcCCCcccEEEEecCC--CCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEeh
Confidence 4566777434699999986 46999999999998876555556789999999999999999999999999999999999
Q ss_pred ccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceec
Q 046506 82 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
||+++..+.+ ++....++..+|++++++|||+++|.++|+++++++..+ +.+...+.|+..... ..+++..+.++
T Consensus 296 a~~~~~~~~~-~~~~~~gi~~~D~i~~s~hK~l~~p~~~G~l~~~~~~~~-~~~~~~~~yl~~~~~---~~~~~~~~~~~ 370 (497)
T 2qma_A 296 AYGGALILSS-HKSRLKGVERAHSISVDFHKLFYQTISCGALLVNDKSNF-KFLLHHADYLNREHD---ELPNLVDKSIA 370 (497)
T ss_dssp TTGGGGGGST-TGGGGTTGGGCSEEEEETTTTTCCCSSCEEEEESCGGGG-GGGCC-----------------------C
T ss_pred hhhHHHHhCc-chHhhcCcccCCEEEEcchhccCCCcceEEEEEeCHHHH-HHhcCCchhcCCccc---cCCCccccCCC
Confidence 9998887766 444445555799999999999999999999999988655 344444566644321 13455667788
Q ss_pred cCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccch
Q 046506 162 LSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLS 241 (310)
Q Consensus 162 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
++|++.++++|++++.++.++++++.++..++++++.+.|+++|+++++.++..++++|++.+...
T Consensus 371 ~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~-------------- 436 (497)
T 2qma_A 371 TTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLSTVLFRATHETA-------------- 436 (497)
T ss_dssp CSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSSEEEEEECCSSS--------------
T ss_pred CCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCceEEEEEEcCCcc--------------
Confidence 999999999999999999999999999999999999999999999999878888999999876320
Q ss_pred hHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 242 EEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 242 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
..+.++.++.+.+.++|.++..++.+.+..++|+|+.++++|++||++++++|++++.++
T Consensus 437 ---~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 496 (497)
T 2qma_A 437 ---DLDELNKALRLEALTRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINMLAVEL 496 (497)
T ss_dssp ---CHHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred ---CHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 113455678888889998887777778888999998678999999999999999987654
No 8
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=100.00 E-value=3.6e-32 Score=258.43 Aligned_cols=264 Identities=16% Similarity=0.210 Sum_probs=208.7
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh------Cc
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF------GI 75 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~------g~ 75 (310)
+++++|++ ++.||++++ .+.+|+++|+++|++. +.+|++++++|.+|.++|+++|+++|+++ |+
T Consensus 170 ~~~~~G~~---~~~v~~~~~-~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~ 239 (502)
T 3hbx_A 170 FARYFEVE---LKEVKLSEG-YYVMDPQQAVDMVDEN------TICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDT 239 (502)
T ss_dssp HHHHTTCE---EEEECCBTT-BCSCCHHHHHHHCCTT------EEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHcCce---eEEEecCCC-cCcCCHHHHHHHHhhC------CEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCC
Confidence 56778888 999999874 4799999999999764 56899999999999999999999999999 99
Q ss_pred EEEeeccccccccc--ChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCcccccccccccccc
Q 046506 76 WVHVDAAYAGSACI--CPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVV 153 (310)
Q Consensus 76 ~l~vD~a~~~~~~~--~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~ 153 (310)
|+|||+||+++..+ .+.... ...+.++|++++++|||+++|.|+|+++++++..+...+...+.|+....
T Consensus 240 ~l~VD~A~~~~~~p~~~~~~~~-~~~~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~------- 311 (502)
T 3hbx_A 240 PIHVDAASGGFIAPFLYPELEW-DFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQ------- 311 (502)
T ss_dssp CEEEECTTGGGTHHHHCTTCCC-STTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSCE-------
T ss_pred eEEEECCccchhhhhhCccccc-ccCCCCceEEEECcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCCC-------
Confidence 99999999876532 222221 11245799999999999999999999999988665455555556665432
Q ss_pred CCCCceeccCCCc-chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC-CCceEEEEEEcCCcchhhh
Q 046506 154 DYKDWQITLSRRF-RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP-RHFAVVCFRVSPSAVMDKL 231 (310)
Q Consensus 154 ~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~~~~v~~~~~~~~~~~~~ 231 (310)
..+.++++|+. .++++|++++.++.+++.+++++..++++++++.|+++++++++.+ +..++++|++.+..-
T Consensus 312 --~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~---- 385 (502)
T 3hbx_A 312 --PTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSSC---- 385 (502)
T ss_dssp --EECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEESSCSS----
T ss_pred --CCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEecCCCc----
Confidence 12345566664 6788999999999999999999999999999999999988999876 789999999976310
Q ss_pred hhhhccccchhHHHHHHHHHHHHHHHHhcCcEEE---EEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 232 KTKYENSLLSEEERINEFNRELLESINASGKAYM---THAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
.. ..++.+.|.++|.+.. .+..+.+..++|++++ ..+|+||++.|+++|+++++.+.+
T Consensus 386 ---------~~-------~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~-~~~t~edid~li~~L~~~l~~l~~ 446 (502)
T 3hbx_A 386 ---------HT-------EFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIR-EDFSRTLAERLVIDIEKVMRELDE 446 (502)
T ss_dssp ---------CC-------HHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred ---------CC-------HHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeC-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 00 1367888888887532 2223345689999977 579999999999999999987753
No 9
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=100.00 E-value=7.3e-32 Score=253.11 Aligned_cols=265 Identities=18% Similarity=0.259 Sum_probs=203.6
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh------Cc
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF------GI 75 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~------g~ 75 (310)
+++++|+. ++.||++++ ++.+|+++|+++|++. +.+|++++++|.+|.++|+++|+++|++| |+
T Consensus 155 ~~~~~G~~---v~~v~~~~~-~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~ 224 (452)
T 2dgk_A 155 FARYWDVE---LREIPMRPG-QLFMDPKRMIEACDEN------TIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDI 224 (452)
T ss_dssp HHHHTTCE---EEECCCBTT-BCSCCHHHHHHHCCTT------EEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHcCce---EEEEecCCC-CCeECHHHHHHHHhhC------CEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCC
Confidence 56778887 999999862 4699999999999764 56899999999999999999999999996 99
Q ss_pred EEEeeccccccccc--ChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCcccccccccccccc
Q 046506 76 WVHVDAAYAGSACI--CPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVV 153 (310)
Q Consensus 76 ~l~vD~a~~~~~~~--~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~ 153 (310)
|+|||+||+++..+ .+.... ...+.++|++++++|||+++|.++|+++++++..+.+.+...+.|+...
T Consensus 225 ~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-------- 295 (452)
T 2dgk_A 225 DMHIDAASGGFLAPFVAPDIVW-DFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQ-------- 295 (452)
T ss_dssp CEEEECTTGGGTHHHHCTTCCC-STTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECCTTCC--------
T ss_pred cEEEEcccHHHHHHhhCccchh-hcCCCCCcEEEECcccccCCCCCeEEEEEcCHHHHHHHhccCccccCCC--------
Confidence 99999999887642 121111 1124579999999999999999999999987754434443445565421
Q ss_pred CCCCceeccCCCc-chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC----CCceEEEEEEcCCcch
Q 046506 154 DYKDWQITLSRRF-RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP----RHFAVVCFRVSPSAVM 228 (310)
Q Consensus 154 ~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~----~~~~~v~~~~~~~~~~ 228 (310)
+..+.++++|++ .++++|++++.++.++++++.+++.++++++.+.|+++++++++.+ +..++++|++.+...
T Consensus 296 -~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~~- 373 (452)
T 2dgk_A 296 -IGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGED- 373 (452)
T ss_dssp -EEECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTCC-
T ss_pred -CCCcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCccc-
Confidence 112345677776 6788999999999999999999999999999999999988998865 567899999875210
Q ss_pred hhhhhhhccccchhHHHHHHH-HHHHHHHHHhcCcE---EEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 229 DKLKTKYENSLLSEEERINEF-NRELLESINASGKA---YMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~g~~---~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
... ..++.+.|.++|.. +..+..+.+..++|+|+++ ++|++|+++++++|++++..+
T Consensus 374 ------------------~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~~-~~t~e~id~li~~l~~~~~~~ 434 (452)
T 2dgk_A 374 ------------------PGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCRR-GFEMDFAELLLEDYKASLKYL 434 (452)
T ss_dssp ------------------CSCCHHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECCT-TCCHHHHHHHHHHHHHHHHHH
T ss_pred ------------------ccCCHHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEecC-CCCHHHHHHHHHHHHHHHHHH
Confidence 000 13677788888863 3333333456799999885 578999999999999998776
Q ss_pred hh
Q 046506 305 LS 306 (310)
Q Consensus 305 ~~ 306 (310)
.+
T Consensus 435 ~~ 436 (452)
T 2dgk_A 435 SD 436 (452)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 10
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.95 E-value=1.6e-26 Score=220.18 Aligned_cols=258 Identities=18% Similarity=0.158 Sum_probs=190.8
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeec
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
+++.+|++ ++.||+++ ++.+|+++|+++|+++ +.+|++++++|++|.++|+++|+++|++||+++|||+
T Consensus 208 ~~~~~G~~---v~~v~~~~--~~~~d~~~Le~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDe 276 (514)
T 3mad_A 208 AAQYFGIK---LVRTPLDA--DYRADVAAMREAITPN------TVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDA 276 (514)
T ss_dssp HHHHHTCE---EEEECBCT--TSCBCHHHHHHHCCTT------EEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHcCCe---eEEeeeCC--CCCCCHHHHHHHhccC------CEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEec
Confidence 45667887 99999987 4589999999999753 5688999999999999999999999999999999999
Q ss_pred ccccccccChhhh-----hhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 82 AYAGSACICPEFR-----HFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 82 a~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
||+++..+..... .......++|++++++||++++|.|+|+++++++......+...+.|.... +.
T Consensus 277 a~~~~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 347 (514)
T 3mad_A 277 CLGGFILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPGGL---------YF 347 (514)
T ss_dssp TTTTTTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCTTCS---------EE
T ss_pred ccccccchhHHhcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccccCCCc---------cc
Confidence 9987755310000 111123468999999999999999999999988754322111111111110 11
Q ss_pred CceeccCCCc-chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhh
Q 046506 157 DWQITLSRRF-RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 157 ~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
...+.+++.. ..+++|++++.++..+++++.++..++++++.+.|+++++++++.++ .+++.|...+.+
T Consensus 348 ~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~-~~~~~~~~~~~~--------- 417 (514)
T 3mad_A 348 SPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDP-LWVIAVASDELN--------- 417 (514)
T ss_dssp ESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCC-SSEEEEECSSSC---------
T ss_pred CCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCC-eEEEEEeCCCCC---------
Confidence 1233444443 35788999999999999999999999999999999999999988655 446666554321
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
..++.+.|.++|... .+ ......+|+++++++++++++++++++|++++.++.+
T Consensus 418 --------------~~~l~~~L~~~Gi~v-~g--~~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~ 471 (514)
T 3mad_A 418 --------------IYQVMEEMAGRGWRL-NG--LHRPPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRA 471 (514)
T ss_dssp --------------HHHHHHHHHTTTCBC-EE--ETTTTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHH
T ss_pred --------------HHHHHHHHHhcCCEe-cc--CCCCCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 135778888888644 32 2334579999887788889999999999999987753
No 11
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.94 E-value=7.2e-27 Score=219.43 Aligned_cols=247 Identities=12% Similarity=0.097 Sum_probs=174.8
Q ss_pred cceecCCCCCCEEEEecCC-CCCcccCHHHHHHHH-HHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEe
Q 046506 2 AAQIVGIDVKNFRAIKTTK-SSSYGLSPDSLMAKI-NSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~-~~~~~id~~~Le~~i-~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~v 79 (310)
+++..|++ ++.++..+ ++++.+|+++|+++| ++..+ ..+.+|+.+.++|++|.++|+++|+++|+++|+++||
T Consensus 192 ~~~~~G~~---~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~--~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~v 266 (456)
T 2z67_A 192 AVSFVGMN---MRLVETVLDGDRVYVPVEDIENAIKKEIEL--GNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHII 266 (456)
T ss_dssp HHHHTTCE---EEEECCEEETTEEECCHHHHHHHHHHHHHT--TCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEE
T ss_pred HHHHcCCC---ceEEEEeccCCCCCcCHHHHHHHHHHHhhC--CCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 45567887 88888632 235799999999999 43111 1356677888889999999999999999999999999
Q ss_pred ecccccccccC-hhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCc
Q 046506 80 DAAYAGSACIC-PEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDW 158 (310)
Q Consensus 80 D~a~~~~~~~~-~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 158 (310)
|+||+...... +.......+ ++|++++++|||+++|.|+|+++++++..+... .+.|.+...
T Consensus 267 D~A~~~~~~g~~~~~~~~~~~--~~D~~~~s~hK~~~~p~g~G~l~~~~~~~~~~l---~~~~~g~~~------------ 329 (456)
T 2z67_A 267 NGAYAIQNNYYLEKLKKAFKY--RVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEI---SLSYPGRAS------------ 329 (456)
T ss_dssp ECTTTTTCHHHHHHHHHHHTS--CCSEEEEEHHHHHCCCSSCEEEEESCHHHHHHH---HTTSCSCBC------------
T ss_pred ECcchHHHHHhhHHHHHhhCC--CCCEEEEcCCCCcCCCCCeEEEEEcCHHHHhhc---CcCCCCCCC------------
Confidence 99887655421 221111222 599999999999999999999999877554332 233332110
Q ss_pred eeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCC---CeEEecCCCceEEEEEEcCCcchhhhhhhh
Q 046506 159 QITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDK---RFEVVFPRHFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~---~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
...++++|+++..++.++++++.++..++++++.+.|++++ |+.++.+ . ++++|.+....
T Consensus 330 ------~~~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~~~-~-~~v~~~~~~~~--------- 392 (456)
T 2z67_A 330 ------ATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDV-E-SPIASCISVNS--------- 392 (456)
T ss_dssp ------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCCC-C-CSSEEEEECSS---------
T ss_pred ------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCEecCC-C-CeEEEEEeccc---------
Confidence 01267788899888889999999999999999999999886 7766644 4 78888773211
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcE--EEE-------EeE--ECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKA--YMT-------HAV--LGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~--~~~-------~~~--~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
. ..++.+.|.++|.. -+. +.. ....+.+|+|++ +++|++|||+++++|++++
T Consensus 393 -----------~--~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~-~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 393 -----------D--PVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAA-IGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp -----------C--HHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECC-TTCCHHHHHHHHHHHHTC-
T ss_pred -----------H--HHHHHHHHHHcCCCcceEEeecCccccccccccCcchhhhhhh-cCCCHHHHHHHHHHHHHHh
Confidence 0 13466666666631 111 000 112468999955 7899999999999998643
No 12
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.94 E-value=7.3e-27 Score=221.53 Aligned_cols=257 Identities=16% Similarity=0.212 Sum_probs=190.8
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeec
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
+++.+|+. ++.||++++ .+.+|+++|+++|+++ +.+|++++++|++|.++|+++|+++|++||+++|||+
T Consensus 174 ~~~~~G~~---~~~v~~~~~-~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~ 243 (497)
T 3mc6_A 174 AAYYFGMK---LRHVELDPT-TYQVDLGKVKKFINKN------TVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDS 243 (497)
T ss_dssp HHHHSCCE---EEEECBCTT-TCSBCTTTTGGGCCSS------EEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEET
T ss_pred HHHHcCCe---EEEEecCcc-cCcCCHHHHHHHHhhC------CEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEEC
Confidence 45677887 999999872 4689999999999753 5689999999999999999999999999999999999
Q ss_pred ccccccccChhh------hhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCC
Q 046506 82 AYAGSACICPEF------RHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDY 155 (310)
Q Consensus 82 a~~~~~~~~~~~------~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 155 (310)
||+++..++... ........++|+++.++|||+++|.|+|+++++++......+...+.|.... +
T Consensus 244 a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---------~ 314 (497)
T 3mc6_A 244 CLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTGGL---------Y 314 (497)
T ss_dssp TTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTTSC---------B
T ss_pred cchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccccCCC---------c
Confidence 998765542110 0011122468999999999999999999999887754322112222222211 1
Q ss_pred CCceeccCCCc-chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcC-CCCeEEecCCCceEEEEEEcCCcchhhhhh
Q 046506 156 KDWQITLSRRF-RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGS-DKRFEVVFPRHFAVVCFRVSPSAVMDKLKT 233 (310)
Q Consensus 156 ~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~-~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~ 233 (310)
....+.++|.. ..+++|++++.++.++++++.++..++++++++.|.+ +|+++++.++..++++|...+.+
T Consensus 315 ~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~~~~~------- 387 (497)
T 3mc6_A 315 GSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSSKTLN------- 387 (497)
T ss_dssp CCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEECTTTT-------
T ss_pred CCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeCCCCC-------
Confidence 12223333332 2567899999999999999999999999999999999 79999987888888888765421
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 234 KYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
..++.+.|.++|..... . .....+|++++ .++++|+++++++|++++..+.
T Consensus 388 ----------------~~~l~~~L~~~Gi~v~~-~--~~~~~~ri~~~--~~t~e~i~~~~~~L~~~l~~~~ 438 (497)
T 3mc6_A 388 ----------------IHELSDRLSKKGWHFNA-L--QKPVALHMAFT--RLSAHVVDEICDILRTTVQELK 438 (497)
T ss_dssp ----------------HHHHHHHHHTTTCBCEE-C--CSSCCEEEECC--TTTTCTHHHHHHHHHHHHHHHT
T ss_pred ----------------HHHHHHHHHhCCEEEec-C--CCCCeEEEEEe--CCCHHHHHHHHHHHHHHHHHHH
Confidence 14677888888854322 1 12346799966 4789999999999999998764
No 13
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.93 E-value=6e-25 Score=201.12 Aligned_cols=248 Identities=17% Similarity=0.243 Sum_probs=183.4
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|+. ++.+|.+++ +.+|+++|+++|++. .+.++++++++|++|.+.|+++|+++|++||+++++|++
T Consensus 140 ~~~~g~~---~~~v~~~~~--~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea 209 (397)
T 3f9t_A 140 REMMDLE---YIYAPIKED--YTIDEKFVKDAVEDY-----DVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAA 209 (397)
T ss_dssp HHHHTCE---EEEECBCTT--SSBCHHHHHHHHHHS-----CCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECT
T ss_pred HHHcCce---eEEEeeCCC--CcCCHHHHHHHHhhc-----CCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEcc
Confidence 4556776 999999864 589999999999872 144788889999999999999999999999999999999
Q ss_pred cccccccChhhh--------hhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccC
Q 046506 83 YAGSACICPEFR--------HFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVD 154 (310)
Q Consensus 83 ~~~~~~~~~~~~--------~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 154 (310)
|+++.+...... ...... ++|++++++||++++|.++|+++++++... +.+....+|+.....
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~------- 280 (397)
T 3f9t_A 210 FGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGHCPIPSGGILFKDIGYK-RYLDVDAPYLTETRQ------- 280 (397)
T ss_dssp TGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTCCCSSCEEEEESSGGGG-GGTCEECTTSSSSEE-------
T ss_pred ccchhhhhcccccccccccccccccc-cCCeEEEccccccCCCCCceEEEEeCHHHH-HhhccCCccccCCCc-------
Confidence 987655332110 000112 589999999999999999999999887543 333222334333210
Q ss_pred CCCceeccCCC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhh
Q 046506 155 YKDWQITLSRR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKT 233 (310)
Q Consensus 155 ~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~ 233 (310)
..+.+++. ...+++++++..++..+++++.++..++++++.+.|+++ +++++.++..++++|.....
T Consensus 281 ---~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-------- 348 (397)
T 3f9t_A 281 ---ATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKEN-NFKPVIEPILNIVAIEDEDY-------- 348 (397)
T ss_dssp ---CSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCCSSSEEEEECTTH--------
T ss_pred ---cccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEcCCCccEEEEEeCCH--------
Confidence 11223332 245677888888888889999999999999999999988 88877777888887765431
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 234 KYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
.++.+.|.++|.. +.+.. ..+++|++++ ..++++|+++++++|+++++
T Consensus 349 -----------------~~~~~~l~~~gi~-v~~~~--~~~~~Ri~~~-~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 349 -----------------KEVCKKLRDRGIY-VSVCN--CVKALRIVVM-PHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp -----------------HHHHHHHHHTTCB-CEECS--SSSEEEEECC-TTCCHHHHHHHHHHHHHHC-
T ss_pred -----------------HHHHHHHHhCCeE-EeccC--CCCEEEEEEc-CCCCHHHHHHHHHHHHHhhC
Confidence 4677778788754 33321 2478999966 67899999999999988653
No 14
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.92 E-value=6.4e-25 Score=202.93 Aligned_cols=186 Identities=17% Similarity=0.165 Sum_probs=139.9
Q ss_pred CcceecCCCCCCEEEEecCC-CCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEe
Q 046506 1 KAAQIVGIDVKNFRAIKTTK-SSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 1 kaa~~~g~~~~~v~~v~~~~-~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~v 79 (310)
||+.++|++ .++|++.+ ++.+.+|+++|+++|.+.... .+.+|+.+.+++..|.++||++|+++||+||+|+||
T Consensus 159 kAl~l~Gl~---p~~v~~~~~~~~~~id~~~le~aI~~~~~~--~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~V 233 (450)
T 3bc8_A 159 KSMVTAGFE---PVVIENVLEGDELRTDLKAVEAKIQELGPE--HILCLHSTTACFAPRVPDRLEELAVICANYDIPHVV 233 (450)
T ss_dssp HHHHHTTCE---EEEECCEEETTEEECCHHHHHHHHHHHCGG--GEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEE
T ss_pred HHHHHcCCe---eEEEEeeecCccCCcCHHHHHHHHHhcCCC--CEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEE
Confidence 577889998 66665521 125799999999999885311 244566655555567899999999999999999999
Q ss_pred ecccccccccChhhhhhhcCC--CCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 80 DAAYAGSACICPEFRHFIDGV--EGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~--~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
|+|||+.......... ..+ +++|+++.|+|||+++|.|+++++++++..++.... .|....
T Consensus 234 D~A~G~~~~~~~~l~~--~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~~---~~~g~~------------ 296 (450)
T 3bc8_A 234 NNAYGLQSSKCMHLIQ--QGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISK---MYPGRA------------ 296 (450)
T ss_dssp ECTTTTTCHHHHHHHH--HHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHHH---HSCSCB------------
T ss_pred ECCCchhhhhhHhHHH--HHhcccCCCEEEECCccCCCchhccEEEEecCHHHHHHHHH---HhhcCC------------
Confidence 9999876554322110 122 479999999999999999999999998866644321 222111
Q ss_pred ceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCC---CeEEecCCC
Q 046506 158 WQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDK---RFEVVFPRH 214 (310)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~---~~~v~~~~~ 214 (310)
.+ ...+.+|.++..+|.+++.+.++++.++++++++.|++++ +++++..+.
T Consensus 297 ----s~--SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~ 350 (450)
T 3bc8_A 297 ----SA--SPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPH 350 (450)
T ss_dssp ----CS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTT
T ss_pred ----cc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCcc
Confidence 00 1358899999999999999999999999999999999888 888876543
No 15
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.92 E-value=1.1e-23 Score=197.94 Aligned_cols=250 Identities=10% Similarity=0.052 Sum_probs=173.6
Q ss_pred EEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhh
Q 046506 15 AIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFR 94 (310)
Q Consensus 15 ~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~ 94 (310)
.+|.++ .+.+|+++|+++|++.+. .+.+|++++.+|++|.+.|+++|+++|++||+++++|++|+.+..+.+...
T Consensus 190 ~~~~~~--~~~~d~~~l~~~i~~~~~---~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~ 264 (465)
T 3e9k_A 190 IKPREG--EETLRIEDILEVIEKEGD---SIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHD 264 (465)
T ss_dssp ECCCTT--CSSCCHHHHHHHHHHHGG---GEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHH
T ss_pred EecCCC--CCccCHHHHHHHHHhcCC---CeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhh
Confidence 344443 468999999999986421 256899999999999999999999999999999999999998887665322
Q ss_pred hhhcCCCCCCeeeeecccccc-cccceEEEEEeCchhHHhhhccCCccccccccccc-----cccCCCCceeccCCC--c
Q 046506 95 HFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESK-----QVVDYKDWQITLSRR--F 166 (310)
Q Consensus 95 ~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~-----~~~~~~~~~~~~~~~--~ 166 (310)
. ++|++++++||+++ +|.|+|+++++++. +.........+......... ..+......++.+.+ .
T Consensus 265 ~------~~D~~~~s~~K~l~~gp~~~g~l~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~ 337 (465)
T 3e9k_A 265 W------GVDFACWCSYKYLNAGAGGIAGAFIHEKH-AHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPIL 337 (465)
T ss_dssp H------TCCEEEECSSSTTCCCTTCCCEEEECGGG-TTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHH
T ss_pred c------CCCEEEECcccccccCCCceEEEEEcHHH-HhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHH
Confidence 1 58999999999994 78889999987553 22211111111111000000 000111122233333 2
Q ss_pred chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCC----------CCeEEecCC----CceEEEEEEcCCcchhhhh
Q 046506 167 RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSD----------KRFEVVFPR----HFAVVCFRVSPSAVMDKLK 232 (310)
Q Consensus 167 ~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~----------~~~~v~~~~----~~~~v~~~~~~~~~~~~~~ 232 (310)
..+++.+++..+...+++++.++..++++++.+.|+++ ++++++.+. ..++++|.+....
T Consensus 338 ~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~~~------ 411 (465)
T 3e9k_A 338 LVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSVPN------ 411 (465)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECCTT------
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecCCH------
Confidence 34566777777766678999999999999999999875 789988654 2678888776311
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 233 TKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.++.+.|.++|.+. . ....+++|+|+.+.+++++||++++++|++++...
T Consensus 412 ------------------~~l~~~L~~~Gi~v-~---~~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~ 461 (465)
T 3e9k_A 412 ------------------KDVFQELEKRGVVC-D---KRNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSA 461 (465)
T ss_dssp ------------------CCHHHHHHTTTEEC-E---EETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC-
T ss_pred ------------------HHHHHHHHHCCEEE-e---cCCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhc
Confidence 25677787887543 2 23457999997567899999999999999987643
No 16
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.91 E-value=1.2e-23 Score=193.97 Aligned_cols=261 Identities=11% Similarity=0.026 Sum_probs=175.2
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|+. ++.+|.+++ +.+|+++|+++|++. .+.+|++++++|++|.+.|+++|+++|++||+++++|++
T Consensus 107 ~~~~g~~---~~~v~~~~~--~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea 176 (411)
T 3nnk_A 107 ARRCRAE---VHTIEVPWG--EVFTPDQVEDAVKRI-----RPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDAT 176 (411)
T ss_dssp HHHTTCE---EEEEECCTT--CCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECT
T ss_pred HHHcCCe---EEEEecCCC--CCCCHHHHHHHHhhC-----CCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECC
Confidence 3456766 999999764 489999999999863 145888899999999999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhc---cCCcccccccccc--cccc-CCC
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLS---TNPEYLKNKATES--KQVV-DYK 156 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~---~~~~y~~~~~~~~--~~~~-~~~ 156 (310)
|+.+..+.+.. . .++|++++++|||+++|.|+|+++++++ .+..... ..+.|........ .... .+.
T Consensus 177 ~~~~~~~~~~~-----~-~~~d~~~~s~~K~l~~~~g~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~ 249 (411)
T 3nnk_A 177 ASLGGNPLETD-----V-WGLDAVSAGMQKCLGGPSGTSPITLSAR-MEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYF 249 (411)
T ss_dssp TTBTTBCCCTT-----T-TTCSEEECCSTTTTCCCSSEEEEEECHH-HHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTT
T ss_pred cccCCcccchh-----c-cCCcEEEecCccccCCCCceEEEEECHH-HHHHHhhcccccccccccccccccCCCCccccc
Confidence 98766544321 1 2589999999999999999999988655 3322221 1122221110000 0000 000
Q ss_pred ----------CceeccCC-C-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC---ceEEEEE
Q 046506 157 ----------DWQITLSR-R-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH---FAVVCFR 221 (310)
Q Consensus 157 ----------~~~~~~~~-~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~---~~~v~~~ 221 (310)
...+..+. . ....++.++++.+...+++++.++..++++++.+.|+++ ++++..++. .++++|.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~ 328 (411)
T 3nnk_A 250 DLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAM-GLETFGDLKHKMNNVLGVV 328 (411)
T ss_dssp CHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCSSEEEEE
T ss_pred chHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEeCCCcccccccEEEEE
Confidence 00111111 1 123445556665555568899999999999999999987 887764432 5677777
Q ss_pred EcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhc-CcEEEEEeE-ECCEeEEEEEccCCCCCHHHHHHHHHHHHH
Q 046506 222 VSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINAS-GKAYMTHAV-LGGIYAIRFAAGATLTEERHVMVAWTVVQE 299 (310)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~-~~~~~~iRis~~~~~~t~edi~~li~~l~~ 299 (310)
++... + ..++.+.|.++ |. .+.+.. ....+++|++++++.++++|+++++++|++
T Consensus 329 ~~~~~---------------~-------~~~l~~~l~~~~gi-~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~ 385 (411)
T 3nnk_A 329 IPQGI---------------N-------GDQARKLMLEDFGI-EIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEA 385 (411)
T ss_dssp CCTTC---------------C-------HHHHHHHHHHHHSE-EEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHH
T ss_pred CCCCC---------------C-------HHHHHHHHHHhcCe-EEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHH
Confidence 64310 0 13566777666 64 444321 123468999975566799999999999999
Q ss_pred HHHHH
Q 046506 300 HLEAL 304 (310)
Q Consensus 300 ~~~~~ 304 (310)
+++++
T Consensus 386 ~l~~~ 390 (411)
T 3nnk_A 386 VLNYL 390 (411)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 98765
No 17
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.91 E-value=8.8e-23 Score=186.16 Aligned_cols=255 Identities=11% Similarity=0.080 Sum_probs=175.2
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+..|+. ++.+|.+++ +.+|+++|+++|++.. +.+|++++++|++|.+.|+++|.++|++||+++++|++|
T Consensus 97 ~~~g~~---~~~v~~~~~--~~~d~~~l~~~i~~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~ 166 (384)
T 3zrp_A 97 KRYPVN---VKVLRPSPG--DYVKPGEVEEEVRKSE-----YKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGVS 166 (384)
T ss_dssp TTSSCE---EEEECCSTT--CCCCHHHHHHHHHHSC-----EEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECTT
T ss_pred HHcCCc---EEEecCCCC--CCCCHHHHHHHHHhCC-----CcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECcc
Confidence 345665 999999874 4899999999998731 568889999999999999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhh-hcc-CCccccccccccccccCC-CC---
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNS-LST-NPEYLKNKATESKQVVDY-KD--- 157 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~-~~~-~~~y~~~~~~~~~~~~~~-~~--- 157 (310)
+.+....+.. . .++|++++++||++++|.|+|+++++++ .+... ... .+.+...... .... ..
T Consensus 167 ~~~~~~~~~~-----~-~~~d~~~~s~~K~~~~~~g~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 235 (384)
T 3zrp_A 167 SVGAEEVKAE-----E-WNVDVYLTASQKALGSAAGLGLLLLSPK-ALSILDSQNSIAGYYLDLRN----WLPVMRGAEE 235 (384)
T ss_dssp TTTTSCCCTT-----T-TTCSEEEEETTSTTCCCSSEEEEEECHH-HHHHHHHCCCSCCSTTCHHH----HHHHHHHHHT
T ss_pred cccCcccccc-----c-cCCCEEEecCcccccCCCceEEEEECHH-HHHHhcCCCCCCcccccHHH----HHHHHHhhcc
Confidence 8766543321 1 1489999999999998999999988655 33332 110 0111100000 0000 00
Q ss_pred -ceec-cCCC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC----CceEEEEEEcCCcchhh
Q 046506 158 -WQIT-LSRR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR----HFAVVCFRVSPSAVMDK 230 (310)
Q Consensus 158 -~~~~-~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~----~~~~v~~~~~~~~~~~~ 230 (310)
.... ++.. ....++.+++..+...+++++.++..++++++.+.|+++ ++++..++ ...+++|.+...+
T Consensus 236 ~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~---- 310 (384)
T 3zrp_A 236 GKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLEIVARRPESYSNTVTGVILKVAD---- 310 (384)
T ss_dssp TCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSCSSGGGBCSSEEEEECSSSC----
T ss_pred cCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeEccCcccccCccEEEEECCCCC----
Confidence 0000 1111 123445566666655668899999999999999999988 88877544 2556677765421
Q ss_pred hhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 231 LKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
..++.+.|.++|.... +......+.+|+++. .+++++|+++++++|++++.++.
T Consensus 311 -------------------~~~~~~~l~~~gi~v~-~g~~~~~~~iRi~~~-~~~~~e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 311 -------------------PQKVLAGTVNEGVEFA-PGVHPAFKYFRIGHM-GWVTPNDAIIAISVIERTLRKLG 364 (384)
T ss_dssp -------------------HHHHHHHHHTTTCCCE-ECCCTTCCEEEEECC-SSCCHHHHHHHHHHHHHHHHHHT
T ss_pred -------------------HHHHHHHHHHCCEEEe-cCCCCCcCEEEEecc-ccCCHHHHHHHHHHHHHHHHHcC
Confidence 1467777878875433 322111278999966 46999999999999999998764
No 18
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.90 E-value=3.2e-23 Score=186.83 Aligned_cols=254 Identities=11% Similarity=0.043 Sum_probs=168.5
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+..|+. ++.+|.+++ +.+|+++|+++|++. .+.+|++++++|++|.+.|+++|.++|++||+++++|++|
T Consensus 94 ~~~g~~---~~~v~~~~~--~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~ 163 (353)
T 2yrr_A 94 ALHGLD---PEVLDFPPG--EPVDPEAVARALKRR-----RYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAVT 163 (353)
T ss_dssp HHTTCC---EEEEECCTT--SCCCHHHHHHHHHHS-----CCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTT
T ss_pred HHcCCc---eEEEeCCCC--CCCCHHHHHHHHHhC-----CCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcCc
Confidence 446776 999999864 489999999999862 1447888999999999999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccC
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLS 163 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 163 (310)
+.+..+.+. .. . ++|++++++|||+++|.|+|+++++++ .+.. +...+.+...... ..+... .....++
T Consensus 164 ~~~~~~~~~-~~----~-~~d~~~~s~~K~~~~~~g~G~~~~~~~-~~~~-l~~~~~~~~~~~~-~~~~~~--~~~~~~~ 232 (353)
T 2yrr_A 164 TLGMLPFSM-RA----M-GVDYAFTGSQKCLSAPPGLAPIAASLE-ARKA-FTGKRGWYLDLAR-VAEHWE--RGGYHHT 232 (353)
T ss_dssp TTTTSCCCH-HH----H-TCSEEECCTTSTTCCCSSCEEEEECHH-HHHH-CCCCSCSTTCHHH-HHHHHT--TCCCSSC
T ss_pred ccccccccc-cc----c-CceEEEecCcccccCCCceEEEEECHH-HHHH-hccCCCccccHHH-Hhhhhh--cCCCCCC
Confidence 765543321 11 1 479999999999999889999988655 3322 2111111100000 000000 0001111
Q ss_pred CCc-chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC--CceEEEEEEcCCcchhhhhhhhccccc
Q 046506 164 RRF-RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR--HFAVVCFRVSPSAVMDKLKTKYENSLL 240 (310)
Q Consensus 164 ~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
... ...++.++++.+...+++++.++..++++++.+.|+++ ++++..++ ...+++|.++...
T Consensus 233 ~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-------------- 297 (353)
T 2yrr_A 233 TPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFRPYPKASPLPTVLVVRPPEGV-------------- 297 (353)
T ss_dssp CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEESCSSSBCTTEEEEECCTTC--------------
T ss_pred CCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccccCccCCCeEEEEECCCCC--------------
Confidence 111 22344556665555568889999999999999999987 89887543 3445667764210
Q ss_pred hhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHH-HHHHHHHHHHH
Q 046506 241 SEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVM-VAWTVVQEHLE 302 (310)
Q Consensus 241 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~-~li~~l~~~~~ 302 (310)
+ ..++.+.|.++|.....+......+.+|+|++. +++++|++ +++++|++++.
T Consensus 298 -~-------~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~~-~~~~~~~~~~~~~~l~~~l~ 351 (353)
T 2yrr_A 298 -D-------ADRLVRALYAEGVAVAGGIGPTRGQVLRLGLMG-EGARREAYQAFLKALDRALA 351 (353)
T ss_dssp -C-------HHHHHHHHHHTTEECEECCGGGTTTCEEEECSG-GGSCHHHHHHHHHHHHHHHH
T ss_pred -C-------HHHHHHHHHHCCEEEeCCccccCCCeEEEecCc-cCCHHHHHHHHHHHHHHHHh
Confidence 0 135677777776433322211234689999754 57888888 99999998764
No 19
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.90 E-value=1.6e-23 Score=193.38 Aligned_cols=261 Identities=11% Similarity=0.057 Sum_probs=172.6
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|+. ++.+|.+++ +.+|+++|+++|++.. +.+|++++++|++|.+.|+++|+++|++||+++++|++
T Consensus 105 ~~~~g~~---~~~v~~~~~--~~~d~~~l~~~i~~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a 174 (416)
T 3isl_A 105 AERYGAN---VHMLECEWG--TVFDPEDIIREIKKVK-----PKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAV 174 (416)
T ss_dssp HHHTTCE---EEEEECCTT--CCCCHHHHHHHHHHHC-----CSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECT
T ss_pred HHhcCCe---eEEEecCCC--CCCCHHHHHHHHhhCC-----CcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECC
Confidence 4456776 999999875 4899999999998421 45889999999999999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccC---C--------cccccccccccc
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTN---P--------EYLKNKATESKQ 151 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~---~--------~y~~~~~~~~~~ 151 (310)
|+.+..+.+.. . .++|++++++|||+++|.|+|+++++++ .+....... . ++..+.......
T Consensus 175 ~~~~~~~~~~~-----~-~~~d~~~~s~~K~l~g~~g~g~~~~~~~-~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~ 247 (416)
T 3isl_A 175 ATIGGCEVKVD-----E-WKIDAAIGGTQKCLSVPSGMAPITYNER-VADVIAARKKVERGIATQADRAALSGNRPITSN 247 (416)
T ss_dssp TTTTTSCCCTT-----T-TTCSEEECCSSSTTCCCSSEEEEEECHH-HHHHHHTC------------------CCCCSCS
T ss_pred ccccCCCcchh-----h-cCCCEEEecCccccCCCCCeEEEEECHH-HHHHhhccccccccccccccchhccCCCCCCcc
Confidence 98766544321 1 2589999999999999999999988655 332221110 0 000000000000
Q ss_pred ccCC-------CCceeccCC-C-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC---ceEEE
Q 046506 152 VVDY-------KDWQITLSR-R-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH---FAVVC 219 (310)
Q Consensus 152 ~~~~-------~~~~~~~~~-~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~---~~~v~ 219 (310)
..+. ....+..+. . ....++.++++.+...+++++.++..++++++.+.|.++ ++++..++. .++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 326 (416)
T 3isl_A 248 YFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAM-GLRLFGDDSCKMPVVTC 326 (416)
T ss_dssp TTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCTTEEE
T ss_pred ccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCccccCCcEEE
Confidence 0000 011111111 1 123445566665555568999999999999999999985 888775432 45777
Q ss_pred EEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhc-CcEEEEEeE-ECCEeEEEEEccCCCCCHHHHHHHHHHH
Q 046506 220 FRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINAS-GKAYMTHAV-LGGIYAIRFAAGATLTEERHVMVAWTVV 297 (310)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~-~~~~~~iRis~~~~~~t~edi~~li~~l 297 (310)
|.+.... + ..++.+.|.++ |. .+.+.. ....+.+|++++.+.++++++++++++|
T Consensus 327 ~~~~~~~---------------~-------~~~l~~~L~~~~gi-~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l 383 (416)
T 3isl_A 327 VEIPGGI---------------D-------GESVRDMLLAQFGI-EIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGL 383 (416)
T ss_dssp EECCTTC---------------C-------HHHHHHHHHHHHCE-ECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHH
T ss_pred EeCCCCC---------------C-------HHHHHHHHHHhCCE-EEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHH
Confidence 7774210 0 13566777666 64 433321 1235689999765445555599999999
Q ss_pred HHHHHHH
Q 046506 298 QEHLEAL 304 (310)
Q Consensus 298 ~~~~~~~ 304 (310)
++++.++
T Consensus 384 ~~~~~~~ 390 (416)
T 3isl_A 384 EAVLLRH 390 (416)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 9998765
No 20
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.90 E-value=2.9e-22 Score=184.03 Aligned_cols=255 Identities=16% Similarity=0.121 Sum_probs=171.6
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+..|.. ++.+|.+++ +.+|+++|+++|++. +.+|++++.+|++|.+.|+++|+++|++||+++++|++|
T Consensus 135 ~~~g~~---~~~~~~~~~--~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~ 203 (406)
T 1kmj_A 135 ARVGAE---LRVIPLNPD--GTLQLETLPTLFDEK------TRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQ 203 (406)
T ss_dssp HHHTCE---EEEECBCTT--SCBCGGGHHHHCCTT------EEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTT
T ss_pred HhCCCE---EEEEecCCC--CCcCHHHHHHHhccC------CeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchh
Confidence 345665 889999864 589999999999653 568889999999999999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCcccccccccc-----ccccCCCCc
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATES-----KQVVDYKDW 158 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~-----~~~~~~~~~ 158 (310)
+.+..+.+. .. . +.|+++.|+||++ +|.|+|+++++ +..+....... ..+..... ...+.....
T Consensus 204 ~~g~~~~~~-~~----~-~~d~~~~s~~K~~-g~~G~G~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 272 (406)
T 1kmj_A 204 AVMHHPVDV-QA----L-DCDFYVFSGHKLY-GPTGIGILYVK-EALLQEMPPWE---GGGSMIATVSLSEGTTWTKAPW 272 (406)
T ss_dssp TTTTSCCCH-HH----H-TCSEEEEEGGGTT-SCTTCEEEEEC-HHHHHHCCCSS---CSTTSEEEEETTTEEEECCTTG
T ss_pred hcCCCCCcc-cc----c-CCCEEEEEchhcc-CCCCcEEEEEe-HHHHhhcCCcc---cCCCceeecccccccccCCCch
Confidence 876654321 11 1 4899999999988 67789999886 43433221111 00000000 000000011
Q ss_pred eeccCCC-cc-hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC-CceEEEEEEcCCcchhhhhhhh
Q 046506 159 QITLSRR-FR-SLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR-HFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 159 ~~~~~~~-~~-~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
.++.+.+ .. .+++.++++.+...+++++.++..++++++.+.|+++|++++..+. ..+++.|.+.+.+
T Consensus 273 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 343 (406)
T 1kmj_A 273 RFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHH--------- 343 (406)
T ss_dssp GGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEEEEETTCC---------
T ss_pred hccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCCEEEEEECCCC---------
Confidence 1222222 11 2233355565544577888999999999999999998899987543 6778888764321
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeE--------ECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKAYMTHAV--------LGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
..++.+.|.+.|.....+.. .+..+++|+|++ .++|++|+++++++|+++++.+
T Consensus 344 --------------~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~-~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 344 --------------AYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLA-MYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp --------------HHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred --------------HHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEee-cCCCHHHHHHHHHHHHHHHHhh
Confidence 13466677777754333221 122478999966 5789999999999999988754
No 21
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.90 E-value=2e-24 Score=197.14 Aligned_cols=245 Identities=13% Similarity=0.046 Sum_probs=167.4
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+..|.. ++++|++++ +.+++++++.+++++ +.+|++++++|.+|++.|+ +|+++|+++|||++|
T Consensus 123 ~~~G~~---~~~~~~~~~--~~~~~~~~~~~i~~~------t~lV~~~h~et~tG~~~pi-----i~~~~~~~~~vD~~q 186 (377)
T 3e77_A 123 KKFGTI---NIVHPKLGS--YTKIPDPSTWNLNPD------ASYVYYCANETVHGVEFDF-----IPDVKGAVLVCDMSS 186 (377)
T ss_dssp TTTSEE---EECSCCCSS--SCSCCCGGGCCCCTT------CSCEEEESEETTTTEECSS-----CCCCTTCCEEEECTT
T ss_pred HHhCCc---eEEeccCCC--cCCCCChHHhccCCC------ccEEEEeCccCchheEchh-----hhccCCCEEEEEccc
Confidence 334554 667787653 357788777766554 3478899999999999999 588999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccC
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLS 163 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 163 (310)
+.+..+.+... .|++++++|||+ +|.|+|+++++++.. .+.-+..|.|+..... . +.....+
T Consensus 187 ~~g~~~id~~~--------~~~~~~s~~K~~-gp~G~g~l~~~~~~l-~~~~~~~p~~~~~~~~-----~---~~~~~~~ 248 (377)
T 3e77_A 187 NFLSKPVDVSK--------FGVIFAGAQKNV-GSAGVTVVIVRDDLL-GFALRECPSVLEYKVQ-----A---GNSSLYN 248 (377)
T ss_dssp TTTSSCCCGGG--------CSEEEEEGGGTT-SCTTCEEEEEETTSC-SCCCTTSCGGGCHHHH-----H---TTTTCSS
T ss_pred ccCCCCCchhh--------cCEEEEeccccc-CCCccEEEEEcHHHH-hhccCCCCchhhHHHH-----h---hcCCCCC
Confidence 99998887432 457899999999 599999999997742 2221122333211100 0 0000112
Q ss_pred CC--cchHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHcCCCCeEEecC-C--Cc-eEEEEEEcCCcchhhhhhhhc
Q 046506 164 RR--FRSLKLWFVLRNYGVA-NLRHFLRSHVNMAKLFERLVGSDKRFEVVFP-R--HF-AVVCFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 164 ~~--~~~~~~~~~l~~~~~~-~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~--~~-~~v~~~~~~~~~~~~~~~~~~ 236 (310)
++ +..+++.++++.+..+ |++++.++..++++++++.|.++||+.+... + +. .+++|.+++.+.
T Consensus 249 Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~--------- 319 (377)
T 3e77_A 249 TPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKG--------- 319 (377)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTTC---------
T ss_pred CchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCCC---------
Confidence 22 2346677788877777 8999999999999999999999999986431 1 33 368999986320
Q ss_pred cccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 237 NSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
. ..+...+.+.+.+.|.. +.+. ....+.+|+|+. .++|+||||+|+++|+++.++
T Consensus 320 ------~---~~~~~~~l~~l~~~Gi~-~~~g-~~~~g~iRiS~~-~~~t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 320 ------D---DALEKRFLDKALELNML-SLKG-HRSVGGIRASLY-NAVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp ------C---HHHHHHHHHHHHHTTEE-SCBC-CTTTCSEEEECC-TTSCHHHHHHHHHHHHHHHHH
T ss_pred ------c---hhHHHHHHHHHHHCCcE-EeCC-CCcCCEEEEECC-CCCCHHHHHHHHHHHHHHHHH
Confidence 0 11212455556666643 3221 122356999976 579999999999999998765
No 22
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.90 E-value=3.4e-22 Score=181.88 Aligned_cols=243 Identities=13% Similarity=0.101 Sum_probs=170.5
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccccc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAG 85 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~ 85 (310)
.|+. ++.+|.+++ +.+|+++|+++|++. +.++++++++|++|.+.|+++|+++|++||+ +++|++|+.
T Consensus 111 ~g~~---~~~v~~~~~--~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~ 178 (382)
T 4hvk_A 111 QGFE---VEYIPVGKY--GEVDVSFIDQKLRDD------TILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASV 178 (382)
T ss_dssp TTCE---EEEECBCTT--SCBCHHHHHHHCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTB
T ss_pred cCCE---EEEeccCCC--CCcCHHHHHHHhccC------ceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhc
Confidence 3665 899999864 489999999999754 4589999999999999999999999999999 999999987
Q ss_pred ccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCC-
Q 046506 86 SACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSR- 164 (310)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~- 164 (310)
+....+... .++|++++++||++ +|.|+|+++++++..+ . .+...... ...+..+.
T Consensus 179 ~~~~~~~~~------~~~d~~~~s~~K~~-g~~g~g~~~~~~~~~~------~-~~~~~~~~---------~~~~~~~~~ 235 (382)
T 4hvk_A 179 GQIEVDVEK------IGADMLTISSNDIY-GPKGVGALWIRKEAKL------Q-PVILGGGQ---------ENGLRSGSE 235 (382)
T ss_dssp TTBCCCHHH------HTCSEEEEESGGGT-SCTTCEEEEEETTCCC------C-CSSCSSCT---------GGGTSCSCC
T ss_pred CCCCCCchh------cCCCEEEEeHHHhc-CCCceEEEEEcCccCc------C-cccccCCC---------cCccccCCc
Confidence 765543221 14899999999975 5778999998876321 1 11111110 00011111
Q ss_pred C-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC---ceEEEEEEcCCcchhhhhhhhccccc
Q 046506 165 R-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH---FAVVCFRVSPSAVMDKLKTKYENSLL 240 (310)
Q Consensus 165 ~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
. ....++.+++... .++++++.++..++++++.+.|.++|++++..++. .+++.|.+.+.+
T Consensus 236 ~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 300 (382)
T 4hvk_A 236 NVPSIVGFGKAAEIT-AMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYIE-------------- 300 (382)
T ss_dssp CHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTCC--------------
T ss_pred CHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEECCCC--------------
Confidence 1 1223334444433 46789999999999999999999999999875442 357788776432
Q ss_pred hhHHHHHHHHHHHHHHHHhcCcEEEEEeEE--CC-----------------EeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 241 SEEERINEFNRELLESINASGKAYMTHAVL--GG-----------------IYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 241 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~~-----------------~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
..++.+.|.+.|.....+... .. .+.+|++++ +.++++|+++++++|++++
T Consensus 301 ---------~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~-~~~t~e~i~~~~~~l~~~~ 370 (382)
T 4hvk_A 301 ---------GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLG-RYNTDEDVDRLLEVLPGVI 370 (382)
T ss_dssp ---------HHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECC-TTCCHHHHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcC-CCCCHHHHHHHHHHHHHHH
Confidence 135666777776543221111 00 478999966 5799999999999999999
Q ss_pred HHHhhcc
Q 046506 302 EALLSAS 308 (310)
Q Consensus 302 ~~~~~~~ 308 (310)
+++.+.+
T Consensus 371 ~~~~~~~ 377 (382)
T 4hvk_A 371 ERLRSMS 377 (382)
T ss_dssp HHHHHTC
T ss_pred HHHHhhc
Confidence 8876543
No 23
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.90 E-value=1e-23 Score=190.86 Aligned_cols=247 Identities=13% Similarity=0.040 Sum_probs=168.2
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh-CcEEEeecc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF-GIWVHVDAA 82 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~-g~~l~vD~a 82 (310)
+..|+. ++.++.+++ +.+|+++|+ +++. +.+|++++++|++|.+.|+++|+++|++| |+++++|++
T Consensus 103 ~~~g~~---~~~v~~~~~--~~~d~~~l~--~~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a 169 (362)
T 3ffr_A 103 GELGRE---AYKEEAAFG--KGFYPADIT--VPAD------AEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAV 169 (362)
T ss_dssp HHTTCE---EEEEECCTT--CCCCGGGCC--CCTT------CCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECT
T ss_pred HHhCCC---eEEEecCCC--CCCCHHHHh--ccCC------ccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecc
Confidence 345665 899998764 589999998 3332 55888889999999999999999999999 999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccC-----CccccccccccccccC-CC
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTN-----PEYLKNKATESKQVVD-YK 156 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~-----~~y~~~~~~~~~~~~~-~~ 156 (310)
|+.+..+.+. ..+|++++++|||+++|.|+|+++++++ .+.+..... ..+...... ..+ ..
T Consensus 170 ~~~~~~~~~~--------~~~d~~~~s~~K~~~~~~G~g~~~~~~~-~~~~~~~~~~gg~~~~~~~~~~~----~~~~~~ 236 (362)
T 3ffr_A 170 SSLPYPKFDW--------TKIDSVFFSVQKCFGLPAGLGVWILNDR-VIEKSKALLAKRKSIGTYHTIPS----MLEKAR 236 (362)
T ss_dssp TTTTSSCCCT--------TSCSEEEEETTSTTCCCSCCEEEEEEHH-HHHHHHHHHHTTCCCCSTTSHHH----HHHHHT
T ss_pred cccCCcccCh--------hHCcEEEEecccccCCCCceEEEEECHH-HHHHhhhccccCCCCcccccHHH----HHHHhh
Confidence 9876544321 1289999999999998889999887755 332221110 011110000 000 00
Q ss_pred CceeccCCC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC----CceEEEEEEcCCcchhhh
Q 046506 157 DWQITLSRR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR----HFAVVCFRVSPSAVMDKL 231 (310)
Q Consensus 157 ~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~----~~~~v~~~~~~~~~~~~~ 231 (310)
.....++.. ....++.++++.+...+++++.++..++++++.+.|+++|++++..+. ...+++|.+.. +
T Consensus 237 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-~----- 310 (362)
T 3ffr_A 237 VNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTM-L----- 310 (362)
T ss_dssp TTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESS-C-----
T ss_pred cCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecCC-C-----
Confidence 000011111 123445566665555568999999999999999999999999987522 24567777654 2
Q ss_pred hhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 232 KTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
..++.+.|.++|.....+....+.+.+|+|++ ..++++|+++++++|+++.
T Consensus 311 ------------------~~~~~~~l~~~gi~~~~g~~~~~~~~iRis~~-~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 311 ------------------PGEINKILEPFDMAVGAGYGSKKETQIRIANF-PAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp ------------------HHHHHHHHGGGTEEEEECSGGGTTTEEEEECC-TTSCHHHHHHHHHHHHHHT
T ss_pred ------------------HHHHHHHHHHCCeEEecCccccCCCEEEEECC-CCCCHHHHHHHHHHHHHHh
Confidence 14677888888644333222224578999976 5789999999999998763
No 24
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.90 E-value=2.9e-23 Score=189.97 Aligned_cols=262 Identities=9% Similarity=0.053 Sum_probs=172.0
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+..|.. ++.+|.++++ .+|+++|+++|++.. +.+|++++++|++|.+.|+++|.++|++||+++++|++|
T Consensus 118 ~~~g~~---~~~~~~~~~~--~~d~~~l~~~i~~~~-----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~ 187 (393)
T 3kgw_A 118 DRIGAR---VHQMIKKPGE--HYTLQEVEEGLAQHK-----PVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVA 187 (393)
T ss_dssp HHTTCE---EEEEECCTTC--CCCHHHHHHHHHHHC-----CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTT
T ss_pred HHcCCc---eEEEeCCCCC--CCCHHHHHHHHhhCC-----CcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCc
Confidence 445665 8999998653 899999999998731 458888899999999999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCC---ccccccccccccccCC-CCce
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNP---EYLKNKATESKQVVDY-KDWQ 159 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~---~y~~~~~~~~~~~~~~-~~~~ 159 (310)
+.+....+.. . .++|++++++||++++|.|+|+++++++ .++....... .+...... ....+.. ....
T Consensus 188 ~~g~~~~~~~-----~-~~~d~~~~s~sK~~~~~~g~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 259 (393)
T 3kgw_A 188 SLGGVPIYMD-----Q-QGIDIMYSSSQKVLNAPPGISLISFNDK-AKYKVYSRKTKPVSFYTDITY-LAKLWGCEGETR 259 (393)
T ss_dssp TTTTSCCCTT-----T-TTCCEEEEESSSTTCCCSSCEEEEECHH-HHHHHHTCSSCCSCSTTCHHH-HHHHTTCSSSCC
T ss_pred cccCcccchh-----h-cCCCEEEecCcccccCCCceeEEEECHH-HHHHHhccCCCCCceeecHHH-HHHhhhhccccC
Confidence 8665443211 1 2589999999999999999999988655 3333221111 11000000 0000000 0000
Q ss_pred eccC-CC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC---C-ceEEEEEEcCCcchhhhhh
Q 046506 160 ITLS-RR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR---H-FAVVCFRVSPSAVMDKLKT 233 (310)
Q Consensus 160 ~~~~-~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~---~-~~~v~~~~~~~~~~~~~~~ 233 (310)
+..+ .. ....++.+++..+..++++++.++..++++++.+.|+++ ++++..++ . ..+++|.+....
T Consensus 260 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~------- 331 (393)
T 3kgw_A 260 VIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEM-GLKFFVKDPEIRLPTITTVTVPAGY------- 331 (393)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSSSGGGBCSSEEEEECCTTB-------
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcCCeEEEEeCCCCC-------
Confidence 1111 11 122344455665555668999999999999999999988 88776332 1 345556654310
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHhc-CcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 234 KYENSLLSEEERINEFNRELLESINAS-GKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
+ ..++.+.|.++ |.....+......+++|++++.+.++++|+++++++|+++++++.+
T Consensus 332 --------~-------~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~ 390 (393)
T 3kgw_A 332 --------N-------WRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHCPK 390 (393)
T ss_dssp --------C-------HHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCB
T ss_pred --------C-------HHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhhh
Confidence 0 13566777776 6433322211235689999755556999999999999999987643
No 25
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.89 E-value=1.2e-22 Score=185.63 Aligned_cols=257 Identities=14% Similarity=0.060 Sum_probs=172.0
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
...|+. ++.+|.+++ +.+|+++|+++|++.. .+.+|++++++|++|.+.|+++|+++|++||+++++|++|
T Consensus 115 ~~~g~~---~~~v~~~~~--~~~d~~~l~~~l~~~~----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~ 185 (386)
T 2dr1_A 115 ESNGRK---AVVLEYEPG--KAVKPEDLDDALRKNP----DVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVS 185 (386)
T ss_dssp HHTTCE---EEEEECCTT--CCCCHHHHHHHHHHCT----TCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTT
T ss_pred HHhCCc---eEEEecCCC--CCCCHHHHHHHHhcCC----CCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccc
Confidence 445666 899999863 5799999999996521 2457888898999999999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccC-CccccccccccccccCCC-Cceec
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTN-PEYLKNKATESKQVVDYK-DWQIT 161 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~-~~y~~~~~~~~~~~~~~~-~~~~~ 161 (310)
+.+..+.+. ... ++|+++.|+||++++|.|+|+++++++ .+....... ..+...... ...... .....
T Consensus 186 ~~~~~~~~~-----~~~-~~di~~~s~sK~~~~~~g~G~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 255 (386)
T 2dr1_A 186 AMGGADIKF-----DKW-GLDVVFSSSQKAFGVPPGLAIGAFSER-FLEIAEKMPERGWYFDIPL---YVKYLKEKESTP 255 (386)
T ss_dssp TBTTBCCCT-----TTT-TCSEEEEETTSTTCCCSSCEEEEECHH-HHHHHTTCTTCCSTTCHHH---HHHHHHHHSSCS
T ss_pred cccCccccc-----ccc-CCcEEEEeccccccCCCceEEEEECHH-HHHHHhcCCCCceEEeHHH---HHHhhccCCCCC
Confidence 877653321 111 489999999999999988999988654 333221100 111000000 000000 00001
Q ss_pred cCCC-cchHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC---CceEEEEEEcCCcchhhhhhhhc
Q 046506 162 LSRR-FRSLKLWFVLRNYGVA-NLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR---HFAVVCFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 162 ~~~~-~~~~~~~~~l~~~~~~-~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~---~~~~v~~~~~~~~~~~~~~~~~~ 236 (310)
++.. ....++.++++.+... +++++.++..++++++.+.|+++ ++++..+. ..+++++.+....
T Consensus 256 ~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~---------- 324 (386)
T 2dr1_A 256 STPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREI-GLDILAEPGHESPTITAVLTPPGI---------- 324 (386)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCTTCBCSSEEEEECCTTC----------
T ss_pred CCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCeeCcCccccCCceEEEEcCCCC----------
Confidence 1111 1234455566655444 57889999999999999999987 88776442 3567777765310
Q ss_pred cccchhHHHHHHHHHHHHHHHHhcCcEEEEEeE-ECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 237 NSLLSEEERINEFNRELLESINASGKAYMTHAV-LGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+ ..++.+.|.++|. .+.+.. ....+++|++++ .+++++|+++++++|++++..+
T Consensus 325 -----~-------~~~~~~~l~~~gi-~v~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~ 379 (386)
T 2dr1_A 325 -----K-------GDEVYEAMRKRGF-ELAKGYGSVKEKTFRIGHM-GYMKFEDIQEMLDNLREVINEL 379 (386)
T ss_dssp -----C-------HHHHHHHHHHTTE-ECEECCGGGTTTEEEEECC-SSCCHHHHHHHHHHHHHHHHHH
T ss_pred -----C-------HHHHHHHHHHCCe-EEecCccccCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHc
Confidence 0 1457777877764 444322 113468999966 4789999999999999988765
No 26
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.89 E-value=1.8e-22 Score=185.00 Aligned_cols=258 Identities=11% Similarity=0.052 Sum_probs=171.5
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
..|+. ++.+|++++ +.+|+++|+++|++.. .+.+|++++++|++|.+.|+++|+++|++||+++++|++|+
T Consensus 104 ~~g~~---~~~v~~~~~--~~~d~~~l~~~l~~~~----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~ 174 (392)
T 2z9v_A 104 RYSPH---LLEIEVPYN--EAIDPQAVADMLKAHP----EITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSS 174 (392)
T ss_dssp HHCSC---EEEEECCTT--SCCCHHHHHHHHHHCT----TCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTT
T ss_pred HcCCc---eEEeeCCCC--CCCCHHHHHHHHhcCC----CCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccc
Confidence 35766 999999875 3799999999996521 14578889999999999999999999999999999999998
Q ss_pred cccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccC--Cc-cccccccccccccCCCCceec
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTN--PE-YLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~--~~-y~~~~~~~~~~~~~~~~~~~~ 161 (310)
.+..+.+. . .. ++|++++|+|||+++|.|+|+++++++ .++...... +. +........ . .+......
T Consensus 175 ~g~~~~~~-~----~~-~~d~~~~s~sK~~~~~~g~G~l~~~~~-~~~~l~~~~~g~~~~~~~~~~~~-~--~~~~~~~~ 244 (392)
T 2z9v_A 175 FGGMKTHP-E----DC-KADIYVTGPNKCLGAPPGLTMMGVSER-AWAKMKANPLAPRASMLSIVDWE-N--AWSRDKPF 244 (392)
T ss_dssp BTTBSCCG-G----GG-TCSEEEECSSSTTCCCSCCEEEEECHH-HHHHHHTCTTSCCSSTTCSGGGT-T--TTSTTSCC
T ss_pred cCCccccc-c----cc-cceEEEecCcccccCCCceeEEEECHH-HHHHhhhccCCCCceeccHHHHH-h--hhcccCCC
Confidence 76554331 1 11 489999999999999999999988654 333221111 11 111100000 0 00000111
Q ss_pred -cCCCc-chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC----CceEEEEEEcCCcchhhhhhhh
Q 046506 162 -LSRRF-RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR----HFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 162 -~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~----~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
++... ..+++.++++.+...+++++.++..++++++.+.|+++ ++++..++ ..+++.+.+....
T Consensus 245 ~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~--------- 314 (392)
T 2z9v_A 245 PFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAM-GLSVWAASDSIASPTTTAVRTPDGV--------- 314 (392)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSSSGGGBCTTEEEEECCTTC---------
T ss_pred CCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc-CCeeccCCccccCCceEEEECCCCC---------
Confidence 11111 12344556665544458889999999999999999887 88876523 3566777764210
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhc-CcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINAS-GKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+ ..++.+.|.++ |.....+......+.+|+++..+.++++|+++++++|++++.++
T Consensus 315 ------~-------~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~ 371 (392)
T 2z9v_A 315 ------D-------EKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMNAA 371 (392)
T ss_dssp ------C-------HHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred ------C-------HHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHHHc
Confidence 0 13566777776 65433322112356899996544789999999999999988765
No 27
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.89 E-value=5.5e-23 Score=188.49 Aligned_cols=260 Identities=14% Similarity=0.052 Sum_probs=169.6
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
..|.. ++.+|.+++ +.+|+++|+++|++. .+.+|++++++|++|.+.|+++|+++|++||+++++|++|+
T Consensus 115 ~~g~~---~~~v~~~~~--~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~ 184 (393)
T 2huf_A 115 RYGAD---VRVVKSKVG--QSLSLDEIRDALLIH-----KPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVAS 184 (393)
T ss_dssp HTTCE---EEEEECCTT--CCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTT
T ss_pred HcCCe---eEEEeCCCC--CCCCHHHHHHHHhcc-----CCcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccc
Confidence 35665 899999864 489999999999862 14478888999999999999999999999999999999997
Q ss_pred cccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhcc---CCccccccccccccccC-CCCcee
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLST---NPEYLKNKATESKQVVD-YKDWQI 160 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~---~~~y~~~~~~~~~~~~~-~~~~~~ 160 (310)
.+..+.+. .. .++|++++++|||+++|.|+|+++++ +..+...... ..+|........ ..+. ......
T Consensus 185 ~~~~~~~~-----~~-~~~d~~~~s~sK~l~g~~G~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 256 (393)
T 2huf_A 185 LGGAPMFM-----DR-WEIDAMYTGSQKVLGAPPGITPVSFS-HRAVERYKRRNTKVKVYYWDMSLVG-DYWGCFGRPRI 256 (393)
T ss_dssp BTTBCCCT-----TT-TTCSEEECCSSSTTCCCSSCEEEEEC-HHHHHHHHTCSSCCSCGGGCHHHHH-HHTTCSSSCCC
T ss_pred cCCCCcch-----hh-cCccEEEECCCcccccCCCeEEEEEC-HHHHHHHhhcCCCCceEEEchHHHH-hhhccccccCC
Confidence 66543321 11 14899999999999988899998886 4343332221 112211100000 0000 000001
Q ss_pred ccC-CCc-chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC--Cc-eEEEEEEcCCcchhhhhhhh
Q 046506 161 TLS-RRF-RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR--HF-AVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 161 ~~~-~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~--~~-~~v~~~~~~~~~~~~~~~~~ 235 (310)
..+ ... ...++.++++.+...+++++.++..++++++.+.|.++ ++++..++ .. .++.+.+....
T Consensus 257 ~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~--------- 326 (393)
T 2huf_A 257 YHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDA-GFELYADPKDRLSTVTTIKVPQGV--------- 326 (393)
T ss_dssp CSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCTTEEEEECCTTC---------
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCccccCCcEEEEEcCCCC---------
Confidence 111 111 12334445655544468888999999999999999987 88776443 23 36667664210
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhc-CcEEEEEeE-ECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 236 ENSLLSEEERINEFNRELLESINAS-GKAYMTHAV-LGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~-~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
+ ..++.+.|.++ |. .+.+.. ....+.+|++++.+.++++++++++++|+++++.+.+
T Consensus 327 ------~-------~~~~~~~L~~~~gi-~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~~ 385 (393)
T 2huf_A 327 ------D-------WLKAAQYAMKTYLV-EISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVKP 385 (393)
T ss_dssp ------C-------HHHHHHHHHHHHCE-ECBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCC
T ss_pred ------C-------HHHHHHHHHHhCCE-EEecCcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcCC
Confidence 0 13566667654 64 443221 1235689999755557899999999999999887643
No 28
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.89 E-value=3.7e-22 Score=180.72 Aligned_cols=258 Identities=10% Similarity=0.059 Sum_probs=168.5
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
...|+. ++.+|.+++ +.+|+++|+++|++.++ +.++++++++|++|.+.|+++|+++|++||+++++|++|
T Consensus 100 ~~~g~~---~~~v~~~~~--~~~d~~~l~~~l~~~~~----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~ 170 (366)
T 1m32_A 100 GLMGIA---HHAYDCGEV--ARPDVQAIDAILNADPT----ISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMS 170 (366)
T ss_dssp HHHTCC---EEEEECCTT--SCCCHHHHHHHHHHCTT----CCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTT
T ss_pred HHhCCc---eEEEeCCCC--CCCCHHHHHHHHhcCCC----eEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCc
Confidence 445776 999999864 47999999999986421 447778888899999999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccC
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLS 163 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 163 (310)
+.+..+.+. .. .++|+++.|+|||+++|.|+|++++++. .+........++.........+. .........+
T Consensus 171 ~~~~~~~~~-----~~-~~~di~~~s~~K~~~~~~g~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 242 (366)
T 1m32_A 171 SFGGIPMDI-----AA-LHIDYLISSANKCIQGVPGFAFVIAREQ-KLAACKGHSRSLSLDLYAQWRCM-EDNHGKWRFT 242 (366)
T ss_dssp TTTTSCCCT-----TT-TTCSEEEEESSSTTCCCSSEEEEEEEHH-HHTTCTTCCSCSTTCHHHHHHHH-HHTTTCCSSC
T ss_pred cccCcCccc-----cc-cCccEEEecCcccccCCCceEEEEECHH-HHHhhcCCCCCccccHHHHHhhh-cccCCCCCCC
Confidence 866543321 11 1489999999999988999999988754 33221111111111000000000 0000000011
Q ss_pred CC-cchHHHHHHHHHhCHHH-HHHHHHHHHHHHHHHHHHHcCCCCeEEecC--CCce-EEEEEEcCC-cchhhhhhhhcc
Q 046506 164 RR-FRSLKLWFVLRNYGVAN-LRHFLRSHVNMAKLFERLVGSDKRFEVVFP--RHFA-VVCFRVSPS-AVMDKLKTKYEN 237 (310)
Q Consensus 164 ~~-~~~~~~~~~l~~~~~~~-~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~~~~-~v~~~~~~~-~~~~~~~~~~~~ 237 (310)
.. ....++.++++.+...+ ++++.++..++++++.+.|+++ ++++..+ +..+ ++.+.+... ..
T Consensus 243 ~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 311 (366)
T 1m32_A 243 SPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GFNTLLDDELHSPIITAFYSPEDPQY---------- 311 (366)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCCCTTC----------
T ss_pred CCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-CCeeccCchhcCceEEEEEcCccCCC----------
Confidence 11 12234455665554444 7889999999999999999987 7877644 2344 677776530 00
Q ss_pred ccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 238 SLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
+ ..++.+.|.++| +.+.+....+.+.+|++++ ..++++|+++++++|++++.
T Consensus 312 ----~-------~~~~~~~l~~~g-i~v~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~ 363 (366)
T 1m32_A 312 ----R-------FSEFYRRLKEQG-FVIYPGKVSQSDCFRIGNI-GEVYAADITALLTAIRTAMY 363 (366)
T ss_dssp ----C-------HHHHHHHHHHTT-EECEECCCSSSCEEEEECC-SSCCHHHHHHHHHHHHHHCT
T ss_pred ----C-------HHHHHHHHHHCC-EEEECCcCCCCCEEEEecC-CCCCHHHHHHHHHHHHHHHH
Confidence 0 135677777776 4444432224578999966 56899999999999988754
No 29
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.89 E-value=5.6e-22 Score=183.11 Aligned_cols=257 Identities=10% Similarity=0.059 Sum_probs=171.2
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
..|+. ++.+|.++ ++.+|+++|+++|++. +.+|++++++|++|.+.|+++|+++|++||+++++|++|+
T Consensus 141 ~~g~~---~~~v~~~~--~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~ 209 (420)
T 1t3i_A 141 KTGAV---LKFVQLDE--QESFDLEHFKTLLSEK------TKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQS 209 (420)
T ss_dssp HHCCE---EEEECBCT--TSSBCHHHHHHHCCTT------EEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTT
T ss_pred hcCcE---EEEeccCC--CCCcCHHHHHHhhCCC------ceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhc
Confidence 45666 88999985 3589999999999653 5688899999999999999999999999999999999998
Q ss_pred cccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCcccccccccc-ccccCCCCceeccC
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATES-KQVVDYKDWQITLS 163 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~-~~~~~~~~~~~~~~ 163 (310)
.+..+.+. .. . ++|++++|+||. ++|.|+|++++++ ..+.................. ...+......++.+
T Consensus 210 ~~~~~~~~-~~----~-~~di~~~s~sK~-~~~~g~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (420)
T 1t3i_A 210 APHYPLDV-QL----I-DCDWLVASGHKM-CAPTGIGFLYGKE-EILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAG 281 (420)
T ss_dssp TTTSCCCH-HH----H-TCSEEEEEGGGT-TSCTTCEEEEECH-HHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCS
T ss_pred cCCccCch-hh----c-CCCEEEEehhhh-cCCCceEEEEEch-HHHhhcCceecCCCccccccccccCCCCchhhccCC
Confidence 77654321 11 1 489999999995 5677888888764 343332111100000000000 00000001112222
Q ss_pred CC-c-chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC-----CceEEEEEEcCCcchhhhhhhhc
Q 046506 164 RR-F-RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR-----HFAVVCFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 164 ~~-~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----~~~~v~~~~~~~~~~~~~~~~~~ 236 (310)
.+ . ..+++.++++.+...+++++.++..++++++.+.|++++++++..+. ..+++.|.+.+.+
T Consensus 282 ~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---------- 351 (420)
T 1t3i_A 282 TPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGLH---------- 351 (420)
T ss_dssp SCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETTBC----------
T ss_pred CccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEEEECCCC----------
Confidence 22 1 12333345665554567889999999999999999998899988654 3678888765311
Q ss_pred cccchhHHHHHHHHHHHHHHHHhcCcEEEEEeE--------ECC-EeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 237 NSLLSEEERINEFNRELLESINASGKAYMTHAV--------LGG-IYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~~-~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
..++.+.|.+.|. .+.+.. ..+ .+++|+|++ ..++++|+++++++|+++++.++
T Consensus 352 -------------~~~~~~~l~~~gi-~v~~~~~~~~~~~~~~g~~~~iRis~~-~~~~~~~i~~~~~~l~~~~~~~~ 414 (420)
T 1t3i_A 352 -------------ASDVATMVDQDGI-AIRSGHHCTQPLHRLFDASGSARASLY-FYNTKEEIDLFLQSLQATIRFFS 414 (420)
T ss_dssp -------------HHHHHHHHHTTTE-ECBCSCTTCHHHHHHTTCCCCEEEECC-TTCCHHHHHHHHHHHHHHHHHTC
T ss_pred -------------HHHHHHHHHHCCe-EEeeccccchHHHHhcCCCCeEEEecC-CCCCHHHHHHHHHHHHHHHHHhc
Confidence 1346666767764 443321 112 578999966 57899999999999999987764
No 30
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.88 E-value=2.9e-22 Score=182.62 Aligned_cols=252 Identities=11% Similarity=0.011 Sum_probs=166.9
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
...|.. ++.++.+++ +.+|+++|++++++. +.++++++++|++|.+.|+++|+++|++||+++++|++|
T Consensus 115 ~~~g~~---~~~v~~~~~--~~~d~~~l~~~~~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~ 183 (376)
T 3f0h_A 115 EIHEIP---YVALKLEHG--KKLTKEKLYEYDNQN------FTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVS 183 (376)
T ss_dssp HHTTCC---EEEEECCTT--CCCCHHHHHTTTTSC------CCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTT
T ss_pred HHcCCc---eEEEeCCCC--CCCCHHHHHHhhccC------ceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcCc
Confidence 344665 899999863 589999999987543 457888888999999999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhcc-CCccccccccccccccC-CCCceec
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLST-NPEYLKNKATESKQVVD-YKDWQIT 161 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~-~~~~~~~ 161 (310)
+.+....+... .++|++++++||++++|.|+|+++++++ .+...... .+.+...... ... .......
T Consensus 184 ~~~~~~~~~~~------~~~d~~~~s~~K~l~~~~G~g~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 252 (376)
T 3f0h_A 184 AFLADPFNMNE------CGADVMITGSQKVLACPPGISVIVLAPR-GVERVEKSKVRTMYFDLKD----ALKNQERGQTP 252 (376)
T ss_dssp TTTTSCCCHHH------HTCSEEEEETTTTTCCCSSCEEEEECHH-HHHHHHTCCCCCSTTCHHH----HHHHHTTTCCS
T ss_pred cccCccccccc------cCccEEEecCcccccCCCceEEEEECHH-HHHHhhcCCCCceeecHHH----HHhhcccCCCC
Confidence 87766543211 1489999999999998889999877654 33332211 1111110000 000 0000000
Q ss_pred cCCCc-chHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCc-eEEEEEEcCCcchhhhhhhhccc
Q 046506 162 LSRRF-RSLKLWFVLRNYGVA-NLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHF-AVVCFRVSPSAVMDKLKTKYENS 238 (310)
Q Consensus 162 ~~~~~-~~~~~~~~l~~~~~~-~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~ 238 (310)
.+... ..+++.+++..+... +++++.++..++++++.+.|.++ ++++..+... .++.+...+.+
T Consensus 253 ~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~------------ 319 (376)
T 3f0h_A 253 FTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDL-PFELVSESPANGVTSVHPTTAN------------ 319 (376)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTS-SEEECCSSBBTTEEEEEESSSC------------
T ss_pred CCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCccCccccCceEEEEeCCCCC------------
Confidence 01011 114455666666555 68999999999999999999987 6877654333 33444432211
Q ss_pred cchhHHHHHHHHHHHHHHHHhcCcEEEEEeE-ECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 239 LLSEEERINEFNRELLESINASGKAYMTHAV-LGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
..++.+.|.+++.+.+.+.. ..+.+++|+|++ ..+|++|+++++++|+++++
T Consensus 320 -----------~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~-~~~t~e~i~~~~~~l~~~l~ 372 (376)
T 3f0h_A 320 -----------AYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHI-GALTHEDNTTLVNAFKDLQK 372 (376)
T ss_dssp -----------HHHHHHHHHHHSSEECEECCGGGTTTCEEEECC-SSCCHHHHHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHHhCCEEEecCccccCCCEEEEecC-CCCCHHHHHHHHHHHHHHHH
Confidence 14577778777334444331 123568999966 56999999999999998764
No 31
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.88 E-value=1.8e-22 Score=184.66 Aligned_cols=263 Identities=13% Similarity=0.090 Sum_probs=174.0
Q ss_pred CcceecCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCc-ccccCChHHHHHHHHHhCcEEE
Q 046506 1 KAAQIVGIDVKNFRAIKTTKS-SSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTA-ITAVDTLKPLCDVAKQFGIWVH 78 (310)
Q Consensus 1 kaa~~~g~~~~~v~~v~~~~~-~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~-~G~~~pl~~I~~l~~~~g~~l~ 78 (310)
||+.+.|+. .++|++..+ +.+.+|+++||++|.+... ..+.++++..++. .+.++||++|+++||+||+++|
T Consensus 177 kAliL~Gl~---Pv~V~p~~d~~~~~id~e~le~aI~e~ga---~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpll 250 (501)
T 3hl2_A 177 KSMITAGFE---PVVIENVLEGDELRTDLKAVEAKVQELGP---DCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHI 250 (501)
T ss_dssp HHHHHTTCE---EEEECEEEETTEEEECHHHHHHHHHHHCG---GGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEE
T ss_pred HHHHHcCCe---EEEEeeeecccccCCCHHHHHHHHHhcCC---CcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEE
Confidence 456778888 888877321 2578999999999998621 1334444444433 4577999999999999999999
Q ss_pred eecccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCc
Q 046506 79 VDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDW 158 (310)
Q Consensus 79 vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 158 (310)
||+|||+...+..........++.+|+++.|+||++..|.|+++++.++++.+.+... .|....
T Consensus 251 VDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvpIGG~ii~~~d~e~l~~~~~---~yPGr~------------- 314 (501)
T 3hl2_A 251 VNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEISK---MYPGRA------------- 314 (501)
T ss_dssp EECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCCSSCEEEEESCHHHHHHHHH---TSCSCB-------------
T ss_pred EeCcchhhhhhhhhhHHHHHhcCCCcEEEecccccceeecCceEEEeCCHHHHHHHHH---hCCCCC-------------
Confidence 9999988765543321111112249999999999999999999998888876654322 221100
Q ss_pred eeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCC---CeEEecCCCceE-EEEEEcCCcchhhhhhh
Q 046506 159 QITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDK---RFEVVFPRHFAV-VCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~---~~~v~~~~~~~~-v~~~~~~~~~~~~~~~~ 234 (310)
..+.++.+|+++..+|.++|.++++++.+++++|++.|+++. |-+++..+..+| +++.+....
T Consensus 315 -----S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~-------- 381 (501)
T 3hl2_A 315 -----SASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLD-------- 381 (501)
T ss_dssp -----CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSC--------
T ss_pred -----CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEeccccc--------
Confidence 124678899999999999999999999999999999998753 456664443322 233333211
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhcCc---EEEEEe--------EEC---------CEeEEEEEccCCCCCHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESINASGK---AYMTHA--------VLG---------GIYAIRFAAGATLTEERHVMVAW 294 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~---~~~~~~--------~~~---------~~~~iRis~~~~~~t~edi~~li 294 (310)
.+ . ......+...|...+. -.+.+. ... ....+=++ .....+++|||.|+
T Consensus 382 --~~---~----~~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a-~aiG~~~~~v~~~~ 451 (501)
T 3hl2_A 382 --EH---R----DKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAA-SAIGMKMQDVDLFI 451 (501)
T ss_dssp --TT---T----SCHHHHHHHHHHHTTCCSCEEECTTCCEEETTEEESSTTTTSSCCSSCEEEEE-CCTTCCHHHHHHHH
T ss_pred --cc---c----cccHHHHHHHHHhcCCCcceeecCCCceEECCeeecCcccCCCCCCchHHHHH-HHcCCCHHHHHHHH
Confidence 00 0 0011234444444332 122211 111 13456566 55789999999999
Q ss_pred HHHHHHHHHHhhcc
Q 046506 295 TVVQEHLEALLSAS 308 (310)
Q Consensus 295 ~~l~~~~~~~~~~~ 308 (310)
+.|.+...+++++.
T Consensus 452 ~~l~~~~~~~~~~~ 465 (501)
T 3hl2_A 452 KRLDRCLKAVRKER 465 (501)
T ss_dssp HHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHhh
Confidence 99999998886543
No 32
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.88 E-value=1.2e-21 Score=179.40 Aligned_cols=254 Identities=9% Similarity=0.056 Sum_probs=165.6
Q ss_pred EEEEecCCCC------C-cccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEeecc
Q 046506 13 FRAIKTTKSS------S-YGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 13 v~~v~~~~~~------~-~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD~a 82 (310)
+++++.++.+ . ..+|+++|+++|++.. +.+|++++++|.+|.+.| +++|+++|++||+++++|++
T Consensus 102 ~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~ 176 (379)
T 3ke3_A 102 STVLTAERTEDTEAPKPFAPVDIETAVAKIKEDK-----SAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCI 176 (379)
T ss_dssp EEEEECEESSCCSSCCCEECCCHHHHHHHHHHHT-----CSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECT
T ss_pred eEEEeccccccccccCCCCCCCHHHHHHHHhhcC-----CcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 6777765311 1 2589999999996531 447888999999999999 99999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhc-cCCcccccccc--ccccccCCCCce
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLS-TNPEYLKNKAT--ESKQVVDYKDWQ 159 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~-~~~~y~~~~~~--~~~~~~~~~~~~ 159 (310)
|+ +..+.+... .++|++++++|||+++|.|+|+++++++ .+..... ...++...... ...+........
T Consensus 177 ~~-g~~~~~~~~------~~~d~~~~s~~K~l~~~~g~g~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 248 (379)
T 3ke3_A 177 AS-GCVWLDMKE------LGIDVLISAPQKGWSSTPCAGLVMLSAA-AIKKVESTESNCFSLDLKQWLTIMRAYENGGHA 248 (379)
T ss_dssp TC-TTCCCCHHH------HTCSEEEECTTTTTCSCCCEEEEEECHH-HHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCC
T ss_pred cc-CCccccccc------cCCCEEEecchhhcCCCCceEEEEECHH-HHHhhhcCCCCceeecHHHHHHHHHhhhccCCC
Confidence 98 655443221 1589999999999999999999998765 3333222 11222211000 000000000000
Q ss_pred eccCCC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC--CceEEEEEEcCCcchhhhhhhhc
Q 046506 160 ITLSRR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR--HFAVVCFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 160 ~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~--~~~~v~~~~~~~~~~~~~~~~~~ 236 (310)
+.++.+ ....++.++++.+..++++++.++..++++++++.|.++ |++++.++ ..+++.....+.
T Consensus 249 ~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~~~~~i~~~~~~~----------- 316 (379)
T 3ke3_A 249 YHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESVAAEGFEAPGVVVSYTER----------- 316 (379)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBCTTCBCSSEEEEECSC-----------
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCCccccCceEEEEccCC-----------
Confidence 011111 123455567776666678999999999999999999987 88876543 244443322221
Q ss_pred cccchhHHHHHHHHHHHHHHHHhcCcEEEEEeE------ECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 237 NSLLSEEERINEFNRELLESINASGKAYMTHAV------LGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~------~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
.. ....+.|.+.|.+ +.+.. ..+.+.+|+|++ .++|++||++++++|+++++++.
T Consensus 317 ----------~~--~~~~~~L~~~Gi~-v~~g~~~~~~~~~~~~~lRis~~-~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 317 ----------DD--MHKGSAFAEAGLQ-IAAGVPLKVGEPDNFKTFRLGLF-GLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp ----------HH--HHSSHHHHHTTCC-CEECCCCSSCCCTTCCEEEEECC-SHHHHTCHHHHHHHHHHHHHHHH
T ss_pred ----------cc--hHHHHHHHHCCeE-EeCCccccccccCcCCEEEEeCC-cCCCHHHHHHHHHHHHHHHHHhc
Confidence 00 1124456667754 33332 123678999966 57899999999999999988764
No 33
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.88 E-value=1.9e-23 Score=191.50 Aligned_cols=235 Identities=11% Similarity=0.024 Sum_probs=161.0
Q ss_pred EEEEecC--CCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCccccc-CChHHHHHHHHHhCcEEEeeccccccccc
Q 046506 13 FRAIKTT--KSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAV-DTLKPLCDVAKQFGIWVHVDAAYAGSACI 89 (310)
Q Consensus 13 v~~v~~~--~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~-~pl~~I~~l~~~~g~~l~vD~a~~~~~~~ 89 (310)
|.++|++ +.+ ..+++++++++|+++ +.+|++++++|.+|++ +||++|+ +|+++|||++|+.+..+
T Consensus 140 v~~v~~~~~~~G-~~~~~~~~~~~l~~~------t~lV~~~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~p 207 (386)
T 3qm2_A 140 PQIIDAKITVDG-KRAVKPMREWQLSDN------AAYLHYCPNETIDGIAIDETPDFG-----PEVVVTADFSSTILSAP 207 (386)
T ss_dssp EEEEECEEEETT-EEEECCGGGCCCCTT------CSCEEECSEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSC
T ss_pred eEEEecCcccCC-CCCCchHHHhhcCCC------CcEEEEECCcCCcCEecCchhhhc-----CCCEEEEEcccccCCCC
Confidence 8899988 433 137888888888765 3478999999999995 9999996 89999999999999988
Q ss_pred ChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC--cc
Q 046506 90 CPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR--FR 167 (310)
Q Consensus 90 ~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~ 167 (310)
.+... .|++++++|||++ |.|+|+++++++. +.+..+..|.++..... . +.....+++ +.
T Consensus 208 idv~~--------~~~~~~s~hK~lG-P~G~g~l~v~~~~-~~~~~~~~p~~~~~~~~-----~---~~~~~~gTp~v~~ 269 (386)
T 3qm2_A 208 LDVSR--------YGVIYAGAQKNIG-PAGLTLVIVREDL-LGKAHESCPSILDYTVL-----N---DNDSMFNTPPTFA 269 (386)
T ss_dssp CCGGG--------CSEEEEETTTTTC-CTTEEEEEEEGGG-CSCCCTTSCGGGCHHHH-----H---HC-------CCSH
T ss_pred CCccc--------cCEEEEecccccC-CCccEEEEECHHH-HhhhcccCCcHHHHHHH-----h---hcCCCCCCCcHHH
Confidence 87432 4578899999995 9999999999773 22221222222110000 0 000001111 24
Q ss_pred hHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHcCCCCe-EEecCC--C-ceEEEEEEcCCcchhhhhhhhccccchh
Q 046506 168 SLKLWFVLRNYGVA-NLRHFLRSHVNMAKLFERLVGSDKRF-EVVFPR--H-FAVVCFRVSPSAVMDKLKTKYENSLLSE 242 (310)
Q Consensus 168 ~~~~~~~l~~~~~~-~~~~~~~~~~~~a~~l~~~L~~~~~~-~v~~~~--~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 242 (310)
.+++.++++.+... |++++.++..++++++++.|.++ ++ ....++ + ..+++|.+++...
T Consensus 270 i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~-~~~~~~~~~~~rs~~iv~f~~~~~~~--------------- 333 (386)
T 3qm2_A 270 WYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS-DFYRNDVAQANRSRMNVPFQLADNTL--------------- 333 (386)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC-SSEECCBCGGGBCSSEEEEEESSGGG---------------
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCHHHcCceEEEEECCCccc---------------
Confidence 56777888888777 89999999999999999999987 55 332222 2 3588999875211
Q ss_pred HHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 243 EERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 243 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+ ..+...|.+.|.....+ ....+.+|+|+. .++|+||||+|+++|+++.++
T Consensus 334 ----~---~~~~~~L~~~gI~~~~g--~~~~~~iRiS~~-~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 334 ----D---KVFLEESFAAGLHALKG--HRVVGGMRASIY-NAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp ----H---HHHHHHHHHTTEECCBC--CTTTCSEEEECC-TTSCHHHHHHHHHHHHHHHHH
T ss_pred ----c---HHHHHHHHHCCCEEeCC--CCCcCeEEEEcC-CCCCHHHHHHHHHHHHHHHHh
Confidence 1 24455566676432211 112245999976 579999999999999998764
No 34
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.88 E-value=1.9e-21 Score=177.36 Aligned_cols=241 Identities=12% Similarity=0.106 Sum_probs=166.5
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccccc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAG 85 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~ 85 (310)
.|+. ++.+|.+++ +.+|+++|+++|++. +.+|++++++|++|.+.|+++|+++|++||++ ++|++|+.
T Consensus 111 ~g~~---~~~v~~~~~--~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~ 178 (382)
T 4eb5_A 111 QGFE---VEYIPVGKY--GEVDVSFIDQKLRDD------TILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASV 178 (382)
T ss_dssp TTCE---EEEECBCTT--SCBCHHHHHHHCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTB
T ss_pred CCcE---EEEeccCCC--CccCHHHHHHHhcCC------CeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhc
Confidence 4665 899999864 589999999999653 55888899999999999999999999999999 99999986
Q ss_pred ccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCC-
Q 046506 86 SACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSR- 164 (310)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~- 164 (310)
+..+.+. .. . ++|++++|+||+ ++|.|+|+++++++..+. .+...... ......+.
T Consensus 179 g~~~~~~-~~----~-~~di~~~s~sK~-~g~~g~G~~~~~~~~~l~-------~~~~~~~~---------~~~~~~~~~ 235 (382)
T 4eb5_A 179 GQIEVDV-EK----I-GADMLTISSNDI-YGPKGVGALWIRKEAKLQ-------PVILGGGQ---------ENGLRSGSE 235 (382)
T ss_dssp TTBCCCH-HH----H-TCSEEEEETGGG-TCCSSCEEEEEETTCCCC-------CSSCSSCT---------GGGTSCSCC
T ss_pred CCcccCc-cc----c-CCCEEEeehHHh-cCCCceEEEEEccccccC-------ceecCCCc---------cccccCCCc
Confidence 5543321 11 1 489999999998 557789999887662111 11111000 00011111
Q ss_pred C-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC---ceEEEEEEcCCcchhhhhhhhccccc
Q 046506 165 R-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH---FAVVCFRVSPSAVMDKLKTKYENSLL 240 (310)
Q Consensus 165 ~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
. ....++.++++.+ .++++++.++..++++++.+.|+++|++++..++. .+++.|.+.+.+
T Consensus 236 ~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 300 (382)
T 4eb5_A 236 NVPSIVGFGKAAEIT-AMEWREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYIE-------------- 300 (382)
T ss_dssp CHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTSC--------------
T ss_pred cHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeCCcC--------------
Confidence 1 1223444555544 34688899999999999999999988998875432 557777775321
Q ss_pred hhHHHHHHHHHHHHHHHHhcCcEEEEEeE--------------E-----CCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 241 SEEERINEFNRELLESINASGKAYMTHAV--------------L-----GGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 241 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------------~-----~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
..++.+.|.+.|.....+.. . .+.+.+|+++. +.++++|+++++++|++++
T Consensus 301 ---------~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~ 370 (382)
T 4eb5_A 301 ---------GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLG-RYNTDEDVDRLLEVLPGVI 370 (382)
T ss_dssp ---------HHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECC-TTCCHHHHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECC-CCCCHHHHHHHHHHHHHHH
Confidence 13456666666653322110 0 01368999955 5789999999999999999
Q ss_pred HHHhh
Q 046506 302 EALLS 306 (310)
Q Consensus 302 ~~~~~ 306 (310)
..+++
T Consensus 371 ~~~~~ 375 (382)
T 4eb5_A 371 ERLRS 375 (382)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88765
No 35
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.87 E-value=6.2e-22 Score=181.57 Aligned_cols=256 Identities=11% Similarity=0.033 Sum_probs=169.0
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|.. ++.+|.+++ +.+|+++|+++|++. + +.+|++++++|++|.+.|+++|+++|++||+++++|++
T Consensus 128 ~~~~g~~---~~~v~~~~~--~~~d~~~l~~~l~~~-~----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea 197 (393)
T 1vjo_A 128 AGRYGAD---VRTISKPWG--EVFSLEELRTALETH-R----PAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTV 197 (393)
T ss_dssp HHHTTCE---EEEEECCTT--CCCCHHHHHHHHHHH-C----CSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECT
T ss_pred HHHcCCc---eEEEecCCC--CCCCHHHHHHHHhhC-C----ceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECC
Confidence 3445666 899999864 489999999999873 1 44788889999999999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccC---CccccccccccccccCCCCce
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTN---PEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~---~~y~~~~~~~~~~~~~~~~~~ 159 (310)
|+.+..+.+. .. .++|+++.++||++++|.++|+++++++ .+....... .++...... ..+... ...
T Consensus 198 ~~~g~~~~~~-----~~-~~~di~~~s~sK~l~~~~~~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~ 267 (393)
T 1vjo_A 198 TSLGGVPIFL-----DA-WGVDLAYSCSQKGLGCSPGASPFTMSSR-AIEKLQRRRTKVANWYLDMNL-LGKYWG--SER 267 (393)
T ss_dssp TTTTTSCCCT-----TT-TTCSEEECCSSSTTCSCSSCEEEEECHH-HHHHHHTCSSCCSCSTTCHHH-HHHHHS--TTC
T ss_pred ccccCcCCcc-----cc-cCccEEEEcCcccccCCCceEEEEECHH-HHHHHhccCCCCCceecCcHh-hhhhhc--cCC
Confidence 9855433221 11 2589999999999999999999988654 333221110 111110000 000000 001
Q ss_pred ecc-CCC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC---ceEEEEEEcCCcchhhhhhh
Q 046506 160 ITL-SRR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH---FAVVCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 160 ~~~-~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~---~~~v~~~~~~~~~~~~~~~~ 234 (310)
... +.. ....++.++++.+...+++++.++..++++++.+.|+++ ++++..+.. .+++.+.++...
T Consensus 268 ~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-------- 338 (393)
T 1vjo_A 268 VYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLSLHVEKEYRLPTLTTVCIPDGV-------- 338 (393)
T ss_dssp CCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCTTC--------
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc-CCcccCCccccCCcEEEEEcCCCC--------
Confidence 111 111 223445566665544567889999999999999999987 887764432 356677664210
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhc-CcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESINAS-GKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
+ ..++.+.|.++ |.....+......+++|+|+..+.+++++++.++++|++++
T Consensus 339 -------~-------~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 339 -------D-------GKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp -------C-------HHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred -------C-------HHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 0 13567777776 65433322222357899996555678889999999998764
No 36
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.87 E-value=1.1e-22 Score=184.88 Aligned_cols=239 Identities=12% Similarity=0.084 Sum_probs=162.7
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+..|+. ++++++++++.+.++++. + |+++ +.+|++++++|.+|++.|. +++ +|+++|||++|
T Consensus 112 ~~~G~~---v~~~~~~~~g~~~~~~~~-~--l~~~------t~lv~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q 173 (361)
T 3m5u_A 112 QILGVN---VKTVASSEESNFDHIPRV-E--FSDN------ADYAYICSNNTIYGTQYQN-----YPK-TKTPLIVDASS 173 (361)
T ss_dssp HHTTCC---EEEEEECTTTTSCSCCCC-C--CCTT------SSEEEEESEETTTTEECSS-----CCC-CSSCEEEECGG
T ss_pred HHcCCc---eEEEecccCcCCCcCChh-h--cCCC------CCEEEEeCCCCCcceeCCc-----ccc-cCCEEEEEccc
Confidence 335776 999999986422256666 4 6554 3488899999999998662 344 49999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhc-cCCccccccccccccccCCCCceecc
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLS-TNPEYLKNKATESKQVVDYKDWQITL 162 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~-~~~~y~~~~~~~~~~~~~~~~~~~~~ 162 (310)
+.+..+.+.. .+|++++++|||++ |.|+|+++++++. +.+..+ ..|.++...... +.....
T Consensus 174 ~~g~~~id~~--------~~d~~~~s~~K~~g-p~G~g~l~~~~~~-~~~~~~~~~p~~~~~~~~~--------~~~~~~ 235 (361)
T 3m5u_A 174 DFFSRKVDFS--------NIALFYGGVQKNAG-ISGLSCIFIRKDM-LERSKNKQIPSMLNYLTHA--------ENQSLF 235 (361)
T ss_dssp GTTSSCCCCT--------TEEEEEEETTTTSS-CTTCEEEEEEHHH-HHHHHTCCCCGGGCHHHHH--------HTTTCS
T ss_pred ccCCCCCCcc--------cCCEEEEechhccC-CCccEEEEEcHHH-HhhhcCCCCCceeehHHHh--------hcCCCC
Confidence 9999887632 37999999999995 9999999998763 333322 223332211000 000001
Q ss_pred CCC--cchHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHcCCCCe-EEecCC--C-ceEEEEEEcC-Ccchhhhhhh
Q 046506 163 SRR--FRSLKLWFVLRNYGVA-NLRHFLRSHVNMAKLFERLVGSDKRF-EVVFPR--H-FAVVCFRVSP-SAVMDKLKTK 234 (310)
Q Consensus 163 ~~~--~~~~~~~~~l~~~~~~-~~~~~~~~~~~~a~~l~~~L~~~~~~-~v~~~~--~-~~~v~~~~~~-~~~~~~~~~~ 234 (310)
+++ +..+++.++++.+... |++++.++..++++++++.|++++++ .+..++ + ..+++|.+++ ...
T Consensus 236 ~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~------- 308 (361)
T 3m5u_A 236 NTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKNKDL------- 308 (361)
T ss_dssp SCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESSCTTH-------
T ss_pred CCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCCchhh-------
Confidence 122 2346677788877667 79999999999999999999999776 554332 2 3588999875 211
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+ .++...|.+.|. .+... ....+.+|+|++ .++|++||++++++|+++.++
T Consensus 309 ------------~---~~~~~~L~~~gI-~~~~g-~~~~g~iRiS~~-~~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 309 ------------E---PLFVKEAEEAGM-IGLKG-HRILGGIRASIY-NALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp ------------H---HHHHHHHHHTTE-ECCBC-CTTTCSEEEECC-TTSCHHHHHHHHHHHHHHHHH
T ss_pred ------------h---HHHHHHHHHCCC-EEecC-CCccCeEEEEcc-CCCCHHHHHHHHHHHHHHHHh
Confidence 1 245566767764 33221 112256999977 579999999999999998764
No 37
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.87 E-value=1.6e-21 Score=175.87 Aligned_cols=246 Identities=14% Similarity=0.046 Sum_probs=165.6
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh--CcEEEeeccc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF--GIWVHVDAAY 83 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~--g~~l~vD~a~ 83 (310)
.|.. ++.+|.+++ +.+|+++|++ + .+.+|++++++|++|.+.|+++|.++|++| |+++++|++|
T Consensus 97 ~g~~---~~~v~~~~~--~~~d~~~l~~---~------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~ 162 (352)
T 1iug_A 97 AGLV---VERLDYPYG--DTPRPEDVAK---E------GYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVT 162 (352)
T ss_dssp TTCE---EEEEECCTT--CCCCTTTSCC---S------SCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTT
T ss_pred cCCc---eEEEeCCCC--CCCCHHHHhc---c------CCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCc
Confidence 5665 899999864 4799999887 2 145788899999999999999999999999 9999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccC-CCCceecc
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVD-YKDWQITL 162 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~-~~~~~~~~ 162 (310)
+.+..+.+. . .. ++|++++++|||+++|.|+|+++++++ .+... .. ..+..... .... .......+
T Consensus 163 ~~~~~~~~~-~----~~-~~d~~~~s~~K~~~~~~g~G~~~~~~~-~~~~~-~~-~~~~~~~~----~~~~~~~~~~~~~ 229 (352)
T 1iug_A 163 SLLVGEVAL-E----AM-GVDAAASGSQKGLMCPPGLGFVALSPR-ALERL-KP-RGYYLDLA----RELKAQKEGESAW 229 (352)
T ss_dssp TBTTBCCCS-G----GG-TCSEEEEESSSTTCCCSCEEEEEECHH-HHHTC-CC-CSSTTCHH----HHHHHHTTTCCSS
T ss_pred cccCcceec-c----cc-CeeEEEecCcccccCCCceeEEEECHH-HHHHh-hC-CCceeeHH----HHHhhcccCCCCC
Confidence 866544331 1 11 489999999999999999999988654 33221 11 01100000 0000 00000011
Q ss_pred CCCc-chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC-CceEEEEEEcCCcchhhhhhhhccccc
Q 046506 163 SRRF-RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR-HFAVVCFRVSPSAVMDKLKTKYENSLL 240 (310)
Q Consensus 163 ~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
+... ...++.++++.+... ++++.++..++++++.+.|+++ ++++..+. ..+++.|.+....
T Consensus 230 ~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-------------- 293 (352)
T 1iug_A 230 TPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEEG-GLRPVPKRFSPAVAAFYLPEGV-------------- 293 (352)
T ss_dssp CCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHT-TCEESCSSBCTTCEEEECCTTC--------------
T ss_pred CCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHC-CCcccccccCCeEEEEEcCCCC--------------
Confidence 1111 123444556554444 7888999999999999999987 89887543 4567777765210
Q ss_pred hhHHHHHHHHHHHHHHHHhcCcEEEEEeE-ECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 241 SEEERINEFNRELLESINASGKAYMTHAV-LGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 241 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+ ..++.+.|.++|. .+.+.. ..+.+.+|++++ ..++++|+++++++|+++++++
T Consensus 294 -~-------~~~~~~~l~~~gi-~v~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~ 348 (352)
T 1iug_A 294 -P-------YARVKEAFAQRGA-VIAGGQGPLKGKVFRLSLM-GAYDRYEALGVAGMFREVLEEI 348 (352)
T ss_dssp -C-------HHHHHHHHHTTTE-ECEECCGGGTTTEEEECCC-SSCCHHHHHHHHHHHHHHHHHH
T ss_pred -C-------HHHHHHHHHHCCE-EEEeCCCccCCCEEEEEcc-ccCCHHHHHHHHHHHHHHHHHh
Confidence 0 1357777777764 444322 113468999966 4688999999999999988766
No 38
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.87 E-value=1.1e-21 Score=179.45 Aligned_cols=255 Identities=13% Similarity=0.140 Sum_probs=169.1
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHH----HhCcEEEe
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAK----QFGIWVHV 79 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~----~~g~~l~v 79 (310)
+..|.. ++.+|.++..++.+|+++|+++|++. +.+|++++++|++|.+.|+++|+++|+ +||+++++
T Consensus 123 ~~~g~~---~~~v~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~ 193 (390)
T 1elu_A 123 ARFGIT---YRFFPVAATLNQGDAAAVLANHLGPK------TRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLV 193 (390)
T ss_dssp HHHCCE---EEEECCGGGSSSSCHHHHHHTTCCTT------EEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEE
T ss_pred HHhCcE---EEEEcCCCCCCccchHHHHHHhcCCC------ceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEEEE
Confidence 345666 88999873124589999999999653 558888999999999999999999999 99999999
Q ss_pred ecccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCC--
Q 046506 80 DAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD-- 157 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~-- 157 (310)
|++|+.+..+.+. .. .++|+++.|+|||+++|.|+|+++++++ .+.........+............++.+
T Consensus 194 Dea~~~g~~~~~~-----~~-~~~d~~~~s~~K~~~~~~g~G~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 266 (390)
T 1elu_A 194 DGAQSAGSLPLDF-----SR-LEVDYYAFTGHKWFAGPAGVGGLYIHGD-CLGEINPTYVGWRSITYGAKGEPTGWAEGG 266 (390)
T ss_dssp ECTTTBTTBCCCT-----TT-SCCSEEEEESSSTTCCCTTCEEEEECTT-TGGGCCCCSCCTTTEEECTTSCEEEECSGG
T ss_pred EcccccCCcCCCh-----hh-cCCCEEEccccccccCCCceEEEEECHH-hHhhcCCccccCCcccccccCcccccccch
Confidence 9999866543321 11 2589999999999999999999998754 3322211100000000000000000000
Q ss_pred ceeccCCC--cchHHHHHHHHHhCHHH-HHHHHHHHHHHHHHHHHHHcCCCCeEEecC--CCceEEEEEEcCCcchhhhh
Q 046506 158 WQITLSRR--FRSLKLWFVLRNYGVAN-LRHFLRSHVNMAKLFERLVGSDKRFEVVFP--RHFAVVCFRVSPSAVMDKLK 232 (310)
Q Consensus 158 ~~~~~~~~--~~~~~~~~~l~~~~~~~-~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~~~~~v~~~~~~~~~~~~~~ 232 (310)
..+..+.. ....++.++++.+...+ ++++.++..++++++.+.|++++++++..+ +..+++.|.+....
T Consensus 267 ~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~------ 340 (390)
T 1elu_A 267 KRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTVDSPL------ 340 (390)
T ss_dssp GGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEECSSS------
T ss_pred HhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEEEEcCCCC------
Confidence 01111211 12234455666554444 888999999999999999998889998753 35778888774210
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 233 TKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
+ ..++.+.|.+.|. .+.+.. +.+++|+|++ ..++++|+++++++|+++
T Consensus 341 ---------~-------~~~~~~~l~~~gi-~v~~~~--~~~~iRis~~-~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 341 ---------G-------HRAIVQKLEEQRI-YLRTIA--DPDCIRACCH-YITDEEEINHLLARLADF 388 (390)
T ss_dssp ---------C-------HHHHHHHHHHTTE-ECEEET--TTTEEEEECC-TTCCHHHHHHHHHHHTTC
T ss_pred ---------C-------HHHHHHHHHHCCE-EEEecC--CCCeEEEecc-cCCCHHHHHHHHHHHHhh
Confidence 0 1356677767764 443322 3468999965 579999999999998754
No 39
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.87 E-value=1.2e-21 Score=178.88 Aligned_cols=254 Identities=13% Similarity=0.085 Sum_probs=166.3
Q ss_pred eecCCCCCCEEEEec-CCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh--CcEEEee
Q 046506 4 QIVGIDVKNFRAIKT-TKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF--GIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~-~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~--g~~l~vD 80 (310)
+..|.. ++.+|. ++ ++.+|+++|+++|++. .+.+|++++.+|++|.+.|+++|+++|++| |+++++|
T Consensus 106 ~~~g~~---~~~v~~~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D 175 (385)
T 2bkw_A 106 RSYGAQ---VDVVRPLKI--GESVPLELITEKLSQN-----SYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVD 175 (385)
T ss_dssp HHTTCE---EEEECCSST--TSCCCHHHHHHHHHHS-----CCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEE
T ss_pred HHcCCc---eEEEecCCC--CCCCCHHHHHHHHhcC-----CCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEE
Confidence 345665 899998 65 3589999999999762 144788899999999999999999999999 9999999
Q ss_pred cccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhc-----cCCcccccccccccccc-C
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLS-----TNPEYLKNKATESKQVV-D 154 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~-----~~~~y~~~~~~~~~~~~-~ 154 (310)
++|+.+..+.+. ... ++|++++++|||+++|.|+|+++++++ .+.+.+. ....|...... ..... .
T Consensus 176 ~a~~~~~~~~~~-----~~~-~~d~~~~s~~K~~~~~~G~G~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~ 247 (385)
T 2bkw_A 176 AVCSIGCEEFEF-----DEW-GVDFALTASQKAIGAPAGLSISLCSSR-FMDYALNDSKNGHVHGYFSSLRR-WTPIMEN 247 (385)
T ss_dssp CTTTTTTSCCCT-----TTT-TCSEEEEESSSTTCCCSCEEEEEECHH-HHHHHTCHHHHCCCSCSTTCHHH-HHHHHHH
T ss_pred CccccCCccccc-----ccc-CceEEEecCccccccCCcceEEEEcHH-HHHHHHhhccCCCCCceeecHHH-HhhHHHh
Confidence 999866544321 112 489999999999999999999988654 3331221 00111110000 00000 0
Q ss_pred CCC--ceeccCCC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH-cCCCCeEEecCC-----CceEEEEEEcCC
Q 046506 155 YKD--WQITLSRR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLV-GSDKRFEVVFPR-----HFAVVCFRVSPS 225 (310)
Q Consensus 155 ~~~--~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L-~~~~~~~v~~~~-----~~~~v~~~~~~~ 225 (310)
+.. ....++.. ...+++.++++.+...+++++.++..++++++.+.| +++ ++++..+. ..+++++.+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~~- 325 (385)
T 2bkw_A 248 YEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGL-QLTSVSRYPSNMSAHGLTAVYVAD- 325 (385)
T ss_dssp HHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTT-CCEESSCSSSTTBCSSCEEEECSC-
T ss_pred hhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhc-CceecccCcccccCCceEEEecCC-
Confidence 000 00001111 122344456655544457888999999999999999 887 88887421 35677776642
Q ss_pred cchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE--CCEeEEEEE-cc-C-CCCCHHHHHHHHHHHHHH
Q 046506 226 AVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVL--GGIYAIRFA-AG-A-TLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~~~~~iRis-~~-~-~~~t~edi~~li~~l~~~ 300 (310)
..++.+.|.+.|. .+.+... ...+.+|+| +. + +.++++|+++++++|+++
T Consensus 326 ------------------------~~~~~~~l~~~gi-~v~~g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~ 380 (385)
T 2bkw_A 326 ------------------------PPDVIAFLKSHGV-VIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLA 380 (385)
T ss_dssp ------------------------HHHHHHHHHHTTE-ECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHH
T ss_pred ------------------------HHHHHHHHHHCCe-EEeCCCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHHH
Confidence 1356677766664 4433221 135789999 44 2 247999999999999887
Q ss_pred HH
Q 046506 301 LE 302 (310)
Q Consensus 301 ~~ 302 (310)
++
T Consensus 381 ~~ 382 (385)
T 2bkw_A 381 LQ 382 (385)
T ss_dssp TT
T ss_pred HH
Confidence 54
No 40
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.87 E-value=9.2e-22 Score=180.51 Aligned_cols=263 Identities=12% Similarity=0.029 Sum_probs=169.5
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|+. ++.+|.+++ +.+|+++|+++|++. + +.+|++++++|++|.+.|+++|+++|++||+++++|++
T Consensus 112 ~~~~g~~---~~~v~~~~~--~~~d~~~l~~~l~~~-~----~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea 181 (396)
T 2ch1_A 112 SERYGAD---VRTIEGPPD--RPFSLETLARAIELH-Q----PKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAV 181 (396)
T ss_dssp HHHTTCE---EEEEECCTT--SCCCHHHHHHHHHHH-C----CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECT
T ss_pred HHHcCCc---eEEecCCCC--CCCCHHHHHHHHHhC-C----CCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEcc
Confidence 3456776 899999864 589999999999863 1 34788889999999999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhcc---CCcccccccccccccc-CCCCc
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLST---NPEYLKNKATESKQVV-DYKDW 158 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~---~~~y~~~~~~~~~~~~-~~~~~ 158 (310)
|+.+..+.+ ... .++|+++.++||++++|.|+|++++++. .+...... ...+............ .....
T Consensus 182 ~~~g~~~~~-----~~~-~~~d~~~~s~~K~~~~~~g~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (396)
T 2ch1_A 182 ASLCGVPFY-----MDK-WEIDAVYTGAQKVLGAPPGITPISISPK-ALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPK 254 (396)
T ss_dssp TTBTTBCCC-----TTT-TTCCEEECCCC-CCCCCSSCEEEEECHH-HHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCC
T ss_pred ccccCCccc-----hhh-cCcCEEEEcCCccccCCCCeEEEEECHH-HHHhhhhccCcccceEechHHHHHhhhhhcccC
Confidence 986544332 111 1479999999999999999998888653 33322111 0111111000000000 00000
Q ss_pred eeccCCCc-chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC----ceEEEEEEcCCcchhhhhh
Q 046506 159 QITLSRRF-RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH----FAVVCFRVSPSAVMDKLKT 233 (310)
Q Consensus 159 ~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~----~~~v~~~~~~~~~~~~~~~ 233 (310)
...++.+. ...++.++++.+..++++++.++..++++++.+.|+++ |++++.+.. ..++.+.+....
T Consensus 255 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~------- 326 (396)
T 2ch1_A 255 RYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKM-GLDIFVKDPRHRLPTVTGIMIPKGV------- 326 (396)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCBSSCSGGGBCTTEEEEECCTTC-------
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCeeccCCccccCCceEEEEcCCCC-------
Confidence 01111111 22444556665545668889999999999999999887 887764332 136677664210
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHhc-CcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 234 KYENSLLSEEERINEFNRELLESINAS-GKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
+ ..++.+.|.++ |.....+......+.+|++++.+.++++|+++++++|+++++++.
T Consensus 327 --------~-------~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~ 384 (396)
T 2ch1_A 327 --------D-------WWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATH 384 (396)
T ss_dssp --------C-------HHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred --------C-------HHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhC
Confidence 0 13566667654 653322111123568999975556799999999999999988764
No 41
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.86 E-value=3.4e-20 Score=171.57 Aligned_cols=240 Identities=13% Similarity=0.143 Sum_probs=163.8
Q ss_pred CCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccc
Q 046506 7 GIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGS 86 (310)
Q Consensus 7 g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~ 86 (310)
|+. ++.+|.+++ +.+|+++|+++|++. +.++++++++|++|.+.|+++|+++|++||+++++|++|+.+
T Consensus 137 g~~---~~~v~~~~~--~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~ 205 (423)
T 3lvm_A 137 GFE---VTYLAPQRN--GIIDLKELEAAMRDD------TILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVG 205 (423)
T ss_dssp TCE---EEEECCCTT--SCCCHHHHHHHCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred CCE---EEEeccCCC--CccCHHHHHHhcCCC------cEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcC
Confidence 665 899999874 589999999999754 568888889999999999999999999999999999999876
Q ss_pred cccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCC-C
Q 046506 87 ACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSR-R 165 (310)
Q Consensus 87 ~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~-~ 165 (310)
..+.+.. . .++|++++++||+ ++|.|+|+++++++.. .. + . .+...... ...+..+. .
T Consensus 206 ~~~~~~~-----~-~~~di~~~s~sK~-~g~~g~G~~~~~~~~~-~~-~--~-~~~~~~~~---------~~~~~~~~~~ 264 (423)
T 3lvm_A 206 KLPIDLS-----Q-LKVDLMSFSGHKI-YGPKGIGALYVRRKPR-VR-I--E-AQMHGGGH---------ERGMRSGTLP 264 (423)
T ss_dssp TSCCCTT-----T-SCCSEEEEESTTT-TSCSSCEEEEECBTTB-CC-C--C-CSSCSSCT---------TTTTCCSCCC
T ss_pred CCCcChh-----h-cCCCEEEechHHh-cCCCCeEEEEEecccc-CC-C--C-ccccCCcc---------cccccCCCCC
Confidence 6543221 1 1489999999996 5577899998875521 11 1 1 11111100 00001111 1
Q ss_pred -cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC---ceEEEEEEcCCcchhhhhhhhccccch
Q 046506 166 -FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH---FAVVCFRVSPSAVMDKLKTKYENSLLS 241 (310)
Q Consensus 166 -~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
....++.++++.+ ...++++.++..++++++.+.|+++|++++..++. .+++.|.+.+.+
T Consensus 265 ~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 328 (423)
T 3lvm_A 265 VHQIVGMGEAYRIA-KEEMATEMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVE--------------- 328 (423)
T ss_dssp HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEETTSC---------------
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEeCCCC---------------
Confidence 1223334455444 23478899999999999999999999999886543 457778775432
Q ss_pred hHHHHHHHHHHHHHHHHhcCcEEEEEeEE---------------C-----CEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 242 EEERINEFNRELLESINASGKAYMTHAVL---------------G-----GIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 242 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---------------~-----~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
..++.+.|.+ +.+.+... . ..+.+|+++. ..++++||++++++|++++
T Consensus 329 --------~~~l~~~l~~---i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~-~~~t~e~i~~~~~~l~~~~ 396 (423)
T 3lvm_A 329 --------GESLIMALKD---LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLG-RFTTEEEIDYTIELVRKSI 396 (423)
T ss_dssp --------HHHHHHHTTT---EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECC-TTCCHHHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHhh---heeccCccccCCCccccHHHHHhCCCccccCceEEEECC-CCCCHHHHHHHHHHHHHHH
Confidence 1234444433 22221100 0 0378999966 5789999999999999999
Q ss_pred HHHhh
Q 046506 302 EALLS 306 (310)
Q Consensus 302 ~~~~~ 306 (310)
+++++
T Consensus 397 ~~~~~ 401 (423)
T 3lvm_A 397 GRLRD 401 (423)
T ss_dssp HHHHT
T ss_pred HHhhc
Confidence 88754
No 42
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.86 E-value=1.3e-20 Score=173.56 Aligned_cols=240 Identities=12% Similarity=0.071 Sum_probs=160.4
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccccc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAG 85 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~ 85 (310)
.|.. ++++|.++. ++.+|+++|+++|++. +.+|++++++|++|.+.|+++|+++|+++|+++++|++|+.
T Consensus 137 ~g~~---v~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~ 206 (406)
T 3cai_A 137 YGAK---VKWAEVDIE-TGELPTWQWESLISKS------TRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAA 206 (406)
T ss_dssp HBCE---EEEECCCTT-TCCCCGGGHHHHCCTT------EEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTT
T ss_pred cCCe---EEEEecCcc-cCCcCHHHHHHHhCCC------ceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEccccc
Confidence 4665 899998842 3589999999999653 56888999999999999999999999999999999999987
Q ss_pred ccccChhhhhhhcCCCCCCeeeeecccccccccceE-EEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCC
Q 046506 86 SACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCC-CLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSR 164 (310)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g-~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 164 (310)
+..+.+... . ++|++++|+||+++ |. +| +++++ +..+........ +... . ....+..+.
T Consensus 207 g~~~~~~~~-----~-~~d~~~~s~~K~~g-~~-~G~~~~~~-~~~~~~l~~~~~-~~~~-~---------~~~~~~~~t 266 (406)
T 3cai_A 207 PYRLLDIRE-----T-DADVVTVNAHAWGG-PP-IGAMVFRD-PSVMNSFGSVST-NPYA-T---------GPARLEIGV 266 (406)
T ss_dssp TTCCCCHHH-----H-CCSEEEEEGGGGTS-CS-CEEEEESC-HHHHHTSCCCCS-CTTC-C---------GGGGGCCSC
T ss_pred CCCCCCchh-----c-CCCEEEeehhhhcC-CC-cCeEEEEe-hHHHhhcCCccc-CCCC-C---------ccccccCCC
Confidence 655443211 1 48999999999875 65 77 77665 433322211110 0000 0 000111111
Q ss_pred -Cc-chHHHHHHHHHhCHH--------------HHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC--CceEEEEEEcCCc
Q 046506 165 -RF-RSLKLWFVLRNYGVA--------------NLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR--HFAVVCFRVSPSA 226 (310)
Q Consensus 165 -~~-~~~~~~~~l~~~~~~--------------~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~--~~~~v~~~~~~~~ 226 (310)
.. ...++.++++.+... +++++.++..++++++.+.|+++|++++..+. ..++++|.+.+.+
T Consensus 267 ~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (406)
T 3cai_A 267 HQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAVHKVP 346 (406)
T ss_dssp CCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCSEEEEEETTBC
T ss_pred ccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCCEEEEEECCcC
Confidence 11 112333445443221 47888899999999999999998899887543 3567777765321
Q ss_pred chhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeE-------E---CCEeEEEEEccCCCCCHHHHHHHHHH
Q 046506 227 VMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAV-------L---GGIYAIRFAAGATLTEERHVMVAWTV 296 (310)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-------~---~~~~~iRis~~~~~~t~edi~~li~~ 296 (310)
..++.+.|.+.|. .+.+.. . .+...+|+++. ..++++|+++++++
T Consensus 347 -----------------------~~~~~~~L~~~gi-~v~~g~~~~~~~~~g~~~~~~~iRis~~-~~~t~e~i~~~~~~ 401 (406)
T 3cai_A 347 -----------------------ADRVVQRLADNGI-LAIANTGSRVLDVLGVNDVGGAVTVGLA-HYSTMAEVDQLVRA 401 (406)
T ss_dssp -----------------------HHHHHHHHHHTTE-ECEECCSCHHHHHHTTTTTTCCEEEECC-TTCCHHHHHHHHHH
T ss_pred -----------------------HHHHHHHHHHCCc-EEecCChHHHHHHcCCCCCCCeEEEEee-cCCCHHHHHHHHHH
Confidence 1356667766664 444321 1 12468999966 57899999999999
Q ss_pred HHHH
Q 046506 297 VQEH 300 (310)
Q Consensus 297 l~~~ 300 (310)
|+++
T Consensus 402 l~~~ 405 (406)
T 3cai_A 402 LASL 405 (406)
T ss_dssp HHTC
T ss_pred HHHh
Confidence 8753
No 43
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.85 E-value=3.5e-20 Score=168.93 Aligned_cols=243 Identities=12% Similarity=0.108 Sum_probs=162.0
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhC--cEEEeec
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFG--IWVHVDA 81 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g--~~l~vD~ 81 (310)
+..|.. ++.+|.+++ +.+|+++|+++|++. +.+|++++++|++|.+.|+++|.++|++|| +++++|+
T Consensus 110 ~~~g~~---~~~v~~~~~--~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~De 178 (384)
T 1eg5_A 110 SMKGFK---VKYVPVDSR--GVVKLEELEKLVDED------TFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDA 178 (384)
T ss_dssp HHTTCE---EEECCBCTT--SCBCHHHHHHHCCTT------EEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEEC
T ss_pred HhcCCE---EEEEccCCC--CccCHHHHHHHhCCC------CeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEh
Confidence 345665 889998864 589999999999653 558888899999999999999999999999 9999999
Q ss_pred ccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceec
Q 046506 82 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
+|+.+..+.+ .... ++|++++|+||++ +|.|+|+++++++..+. .++...... .. ...
T Consensus 179 a~~~~~~~~~-----~~~~-~~di~~~s~sK~~-g~~G~G~~~~~~~~~~~-------~~~~~~~~~-------~~-~~~ 236 (384)
T 1eg5_A 179 VQTIGKIPFS-----LEKL-EVDYASFSAHKFH-GPKGVGITYIRKGVPIR-------PLIHGGGQE-------RG-LRS 236 (384)
T ss_dssp TTTTTTSCCC-----CTTT-CCSEEEEEGGGGT-SCTTCEEEEECTTSCCC-------CSBCSSCTT-------TT-TBC
T ss_pred hhhcCCcccC-----chhc-CCCEEEecHHHhc-CCCceEEEEEcCCCccc-------cccccCccc-------cc-ccC
Confidence 9975443222 1122 4899999999985 46678998887552011 111110000 00 001
Q ss_pred cCCC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC---CceEEEEEEcCCcchhhhhhhhcc
Q 046506 162 LSRR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR---HFAVVCFRVSPSAVMDKLKTKYEN 237 (310)
Q Consensus 162 ~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~---~~~~v~~~~~~~~~~~~~~~~~~~ 237 (310)
++.. ....++.++++.. .++++++.++..++++++.+.|.+ +++++..++ ....+.|.+.+.+
T Consensus 237 ~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~~----------- 303 (384)
T 1eg5_A 237 GTQNVPGIVGAARAMEIA-VEELSEAAKHMEKLRSKLVSGLMN-LGAHIITPLEISLPNTLSVSFPNIR----------- 303 (384)
T ss_dssp SCCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHHT-TTCEECSCTTSBCTTEEEEECTTCC-----------
T ss_pred CCCChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHhCC-CCeEEeCCcccCCCCEEEEEeCCCC-----------
Confidence 1111 1223344455442 346788899999999999999998 689887543 2356677665321
Q ss_pred ccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEEC-------------------CEeEEEEEccCCCCCHHHHHHHHHHHH
Q 046506 238 SLLSEEERINEFNRELLESINASGKAYMTHAVLG-------------------GIYAIRFAAGATLTEERHVMVAWTVVQ 298 (310)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-------------------~~~~iRis~~~~~~t~edi~~li~~l~ 298 (310)
..++.+.|.+.|.....+.... +.+++|+++. ++++++|+++++++|+
T Consensus 304 ------------~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~ 370 (384)
T 1eg5_A 304 ------------GSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLC-KYNTEEEVDYFLKKIE 370 (384)
T ss_dssp ------------HHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECC-TTCCHHHHHHHHHHHH
T ss_pred ------------HHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECC-CCCCHHHHHHHHHHHH
Confidence 1356667766664332211110 1378999965 5789999999999999
Q ss_pred HHHHHHh
Q 046506 299 EHLEALL 305 (310)
Q Consensus 299 ~~~~~~~ 305 (310)
+++++++
T Consensus 371 ~~~~~~~ 377 (384)
T 1eg5_A 371 EILSFLD 377 (384)
T ss_dssp HHHHHC-
T ss_pred HHHHHHH
Confidence 9987764
No 44
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.85 E-value=5e-20 Score=170.11 Aligned_cols=234 Identities=15% Similarity=0.130 Sum_probs=156.3
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeee
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFS 107 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~ 107 (310)
+++|+++|++. +.+|++++++|++|.+.|+++|+++|++||+++++|++|+.+..+.+. .. . ++|+++
T Consensus 155 ~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~-~~----~-~~d~~~ 222 (416)
T 1qz9_A 155 PEELPQAIDQD------TAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDL-HQ----A-GADYAI 222 (416)
T ss_dssp GGGHHHHCSTT------EEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCH-HH----H-TCSEEE
T ss_pred HHHHHHHhCCC------ceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCCh-hh----c-CCCEEE
Confidence 67888888642 568999999999999999999999999999999999999876554331 11 1 489999
Q ss_pred eecccccccccce-EEEEEeCchhHHhhhccCCccccccccccccccCCC----CceeccCC-Cc-chHHHHHHHHHhCH
Q 046506 108 LNAHKWFFTTLDC-CCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK----DWQITLSR-RF-RSLKLWFVLRNYGV 180 (310)
Q Consensus 108 ~~~hK~l~~p~g~-g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~----~~~~~~~~-~~-~~~~~~~~l~~~~~ 180 (310)
+|+||+++++.|+ |+++++++ .+.........|...... .....++. ...+..+. .. ..+++.++++.+..
T Consensus 223 ~s~~K~l~~g~~~~g~l~~~~~-~~~~l~~~~~g~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 300 (416)
T 1qz9_A 223 GCTYKYLNGGPGSQAFVWVSPQ-LCDLVPQPLSGWFGHSRQ-FAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQ 300 (416)
T ss_dssp ECSSSTTCCCTTCCCEEEECTT-TTTTSCCSCCCGGGBCTT-SCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTT
T ss_pred ecCcccCCCCCCCeEEEEECHH-HHhccCCCccccCccccc-cCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHh
Confidence 9999998777777 99988765 222211111111110000 00000000 01111111 11 22445566766655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCC-C--CeEEecCC----CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHH
Q 046506 181 ANLRHFLRSHVNMAKLFERLVGSD-K--RFEVVFPR----HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNREL 253 (310)
Q Consensus 181 ~~~~~~~~~~~~~a~~l~~~L~~~-~--~~~v~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 253 (310)
++++++.++..++++++.+.|.++ | ++++..+. ..+++++.+.. ..++
T Consensus 301 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~l 355 (416)
T 1qz9_A 301 TDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE-------------------------GYAV 355 (416)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTT-------------------------HHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCC-------------------------HHHH
Confidence 678889999999999999999885 6 88887543 35666665542 1456
Q ss_pred HHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 254 LESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 254 ~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.+.|.++|. .+.. .+.+.+|+++++++++++|+++++++|++++.+.
T Consensus 356 ~~~l~~~gi-~~~~---~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~~ 402 (416)
T 1qz9_A 356 IQALIDRGV-IGDY---REPRIMRFGFTPLYTTFTEVWDAVQILGEILDRK 402 (416)
T ss_dssp HHHHHTTTE-ECEE---ETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCc-Eecc---CCCCeEEEeCcccCCCHHHHHHHHHHHHHHHhcc
Confidence 777777774 3321 2456899997645799999999999999988653
No 45
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.84 E-value=8.2e-21 Score=179.02 Aligned_cols=254 Identities=13% Similarity=0.098 Sum_probs=163.2
Q ss_pred cceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCccccc-CChHHHHHHHHHhCcEEEee
Q 046506 2 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAV-DTLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 2 aa~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~-~pl~~I~~l~~~~g~~l~vD 80 (310)
+++..|+. ++.||++++ +.+|+++|+++|+++ +.+|+++++ |.+|.+ +|+++|+++|++||+++|+|
T Consensus 172 ~~~~~G~~---vv~v~~~~~--~~~d~~~L~~~i~~~------t~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~D 239 (474)
T 1wyu_B 172 TASMAGYQ---VREIPSGPE--GEVDLEALKRELGPH------VAALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYD 239 (474)
T ss_dssp HHHHTTCE---EEEECBCTT--SSBCHHHHHHHCSTT------EEEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEE
T ss_pred HHHHCCCE---EEEecCCCC--CCcCHHHHHHhhCCC------ceEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEe
Confidence 34567776 999999864 589999999999754 346777765 569998 79999999999999999999
Q ss_pred cccccccc-cChhhhhhhcCCCCCCeeeeeccccccccc-----ceEEEEEeCchhHHhhhccCCcccccccccccc---
Q 046506 81 AAYAGSAC-ICPEFRHFIDGVEGADSFSLNAHKWFFTTL-----DCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQ--- 151 (310)
Q Consensus 81 ~a~~~~~~-~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~-----g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~--- 151 (310)
++|+.+.. ..+. . . .++|++++|+||+|++|. ++|+++++++ .+ +.+.. .+....+..+.-
T Consensus 240 ea~~~~~~g~~~~-~----~-~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~-l~-~~l~~--~~~~~~g~~~~~~~~ 309 (474)
T 1wyu_B 240 GANLNAIMGWARP-G----D-MGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAH-LA-PYLPV--PLVERGEEGFYLDFD 309 (474)
T ss_dssp GGGGGGTTTTCCH-H----H-HTCSEEECCTTTTTCCCCTTSCCCCCCEEECGG-GG-GGCCS--CEEEECSSCEEEECC
T ss_pred CchhhhhccCCCc-c----c-CCCcEEEEeCccccccCCCCCCCCeEEEEEcHH-HH-HhCCC--CeeeccCCeeEeccc
Confidence 99976553 1111 1 1 148999999999999996 5899988765 33 22211 111000000000
Q ss_pred cc-CCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC-CceEEEEEEcCCcchh
Q 046506 152 VV-DYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR-HFAVVCFRVSPSAVMD 229 (310)
Q Consensus 152 ~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-~~~~v~~~~~~~~~~~ 229 (310)
.. ..+.+....+......++++.++.+|.+++++..++..++++++.+.|.++ ++++..++ ..+.+.+.+... .
T Consensus 310 ~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-~-- 385 (474)
T 1wyu_B 310 RPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEK-GYRVPYDGPSMHEFVAQPPEG-F-- 385 (474)
T ss_dssp CTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCSSCSSCCSCEEEBCSTT-C--
T ss_pred CcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcEecCCCCcceEEEEEcCCC-C--
Confidence 00 000000000111223455566666678889999999999999999999987 88774332 232122333111 0
Q ss_pred hhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 230 KLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
...++.++|.++|... ....+. ..+.+|++++ ..++++++++++++|++++.
T Consensus 386 -------------------~~~~l~~~L~~~Gi~~-~~~~~~~~~~~~lRis~~-~~~t~e~id~~~~~L~~~~~ 439 (474)
T 1wyu_B 386 -------------------RALDLAKGLLELGFHP-PTVYFPLIVKEALMVEPT-ETEAKETLEAFAEAMGALLK 439 (474)
T ss_dssp -------------------CHHHHHHHHHHTTCCC-CEESCSTTSTTCEEECCC-TTSCHHHHHHHHHHHHHHHT
T ss_pred -------------------CHHHHHHHHHHCCccc-cccccccccCCEEEEEee-cCCCHHHHHHHHHHHHHHHH
Confidence 0146777777777642 211111 2468999976 46899999999999998763
No 46
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.84 E-value=3.7e-20 Score=172.74 Aligned_cols=243 Identities=16% Similarity=0.130 Sum_probs=157.9
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc-
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA- 82 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a- 82 (310)
+..|+. ++.+|++ + +.+|+++ |+++ +.+|+++++ |++|.+.|+++|+++||++|+++|||..
T Consensus 172 ~~~G~~---v~~v~~~-~--~~~d~~~----i~~~------t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~ 234 (438)
T 1wyu_A 172 EAVGAK---LLTLPLE-G--GRTPLPE----VGEE------VGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADP 234 (438)
T ss_dssp HHTTCE---EEEECCB-T--TBCCCCC----CCTT------EEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCT
T ss_pred HHCCCE---EEEEcCc-C--CccCHHH----hCCC------eEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEech
Confidence 446776 8899873 2 4788776 4332 568888887 9999999999999999999999997754
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeeccc-----ccccccceEEEEEeCchhHHhhhccCCccccccccccccc----c
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHK-----WFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQV----V 153 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK-----~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~----~ 153 (310)
++.+....+. . .++|++++++|| |+++| |+|+++++++ .. +.+ +.++.+...+..+. .
T Consensus 235 ~a~g~~~~~~-~------~g~D~~~~s~kk~~~~~~~~Gp-~~G~l~~~~~-~~-~~l---~~~~~g~~~~~~~~~~~~~ 301 (438)
T 1wyu_A 235 LSLGVLKPPG-A------YGADIAVGDGQSLGLPMGFGGP-HFGFLATKKA-FV-RQL---PGRLVSETVDVEGRRGFIL 301 (438)
T ss_dssp TGGGTBCCHH-H------HTCSEEEEECTTTTCCCGGGCS-CCEEEEECGG-GG-GGC---CSCCEEEEEBTTSCEEEEE
T ss_pred hhccCcCCCc-c------CCCCEEEECCcccCCCccCCCC-CeeEEEEcHH-HH-HhC---CCceeccccccCCCcceee
Confidence 4444433331 1 158999999888 78888 9999988755 33 222 22221111100000 0
Q ss_pred CC--CC--ceeccCCC-c---c-hHHHHHH--HHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC-CCceEEEEE
Q 046506 154 DY--KD--WQITLSRR-F---R-SLKLWFV--LRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP-RHFAVVCFR 221 (310)
Q Consensus 154 ~~--~~--~~~~~~~~-~---~-~~~~~~~--l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~~~~v~~~ 221 (310)
++ .+ ...+.+.. . . .++++++ +..++.++++++.++..++++++.+.|+++||+++..+ +...++.+.
T Consensus 302 ~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~ 381 (438)
T 1wyu_A 302 TLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEFALA 381 (438)
T ss_dssp CCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSSBCSEEEEE
T ss_pred eccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCCCeEEEEEEe
Confidence 00 00 00011111 1 1 2233333 66677889999999999999999999999999998865 334445554
Q ss_pred EcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEE-EEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 222 VSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAY-MTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~-~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
.... ..++.+.|.++|... ..+..+...+.+|+|++ .++|++|+++++++|+++
T Consensus 382 ~~~~------------------------~~~~~~~L~~~gi~v~~~~~~~~~~~~lRis~~-~~~t~edi~~~~~~l~~~ 436 (438)
T 1wyu_A 382 LPKD------------------------PEAVRRALAERGFHGATPVPREYGENLALFAAT-ELHEEEDLLALREALKEV 436 (438)
T ss_dssp CSSC------------------------HHHHHHHHHHTTCCCCEECCTTSCSSEEEEECC-TTCCHHHHHHHHHHHHHH
T ss_pred CCCC------------------------HHHHHHHHHHCCceeccccccccCCCeEEEEec-ccCCHHHHHHHHHHHHHH
Confidence 3211 146777787777543 12222123578999976 689999999999999875
Q ss_pred H
Q 046506 301 L 301 (310)
Q Consensus 301 ~ 301 (310)
+
T Consensus 437 l 437 (438)
T 1wyu_A 437 L 437 (438)
T ss_dssp C
T ss_pred h
Confidence 3
No 47
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.84 E-value=1.1e-19 Score=166.68 Aligned_cols=244 Identities=13% Similarity=0.066 Sum_probs=162.9
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+..|.. ++.+|. +|+++|+++|++....+..+.+|++++++|++|.+.|+++|+++|++||+++++|++|
T Consensus 145 ~~~g~~---~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~ 214 (399)
T 3tqx_A 145 RLCKAQ---RYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSH 214 (399)
T ss_dssp HSCCSE---EEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTT
T ss_pred HHcCCc---eeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCc
Confidence 344554 666554 5678999999876543334678999999999999999999999999999999999999
Q ss_pred ccccccChh--hhhhhcC-CCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 84 AGSACICPE--FRHFIDG-VEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 84 ~~~~~~~~~--~~~~~~~-~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
+.+....+. ... ..+ ....|+++.++||+++++.| |+++.+ +..+.........|....
T Consensus 215 ~~~~~~~~~~~~~~-~~~~~~~~di~~~s~sK~~~g~~g-G~~~~~-~~~~~~~~~~~~~~~~~~--------------- 276 (399)
T 3tqx_A 215 AVGFIGENGRGTPE-YCGVADRVDILTGTLGKALGGASG-GYTSGH-KEIIEWLRNRSRPYLFSN--------------- 276 (399)
T ss_dssp TTTTSSTTSCCHHH-HHTCTTCCSEEEEESSSSSCSSCC-EEEEEC-HHHHHHHHHHCHHHHSSC---------------
T ss_pred cccccCCCCCchHH-hhCCCCCCcEEEecchHhcccCce-EEEEcC-HHHHHHHHHhCcceeccC---------------
Confidence 754432211 011 111 13579999999999996666 666554 444433222111221110
Q ss_pred ccCCC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhcccc
Q 046506 161 TLSRR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSL 239 (310)
Q Consensus 161 ~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 239 (310)
+.. .....+.++++... ++.+++.++..++.+++.+.|+++ ++++. ++..+++.+.+...
T Consensus 277 --~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~-------------- 337 (399)
T 3tqx_A 277 --TVAPVIVATSLKVLELLK-TEGPQLRKQLQENSRYFRAGMEKL-GFQLV-PGNHPIIPVMLGDA-------------- 337 (399)
T ss_dssp --CCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCSSSEEEEEEECH--------------
T ss_pred --CCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeCCH--------------
Confidence 101 11223334444332 557888899999999999999887 77766 56677777776541
Q ss_pred chhHHHHHHHHHHHHHHHHhcCcEEEEEeE----ECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 240 LSEEERINEFNRELLESINASGKAYMTHAV----LGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 240 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~----~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
....++.+.|.++|.. +.+.. ..+.+++|++++ +.++++|++.++++|+++++++
T Consensus 338 --------~~~~~~~~~l~~~gi~-v~~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 338 --------QLATNMADHLLQEGIY-VVGFSYPVVPMGKARIRVQMS-AVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp --------HHHHHHHHHHHHTTEE-CCEECTTTSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHT
T ss_pred --------HHHHHHHHHHHHCCCE-EeeeCCCCCCCCCceEEEEee-cCCCHHHHHHHHHHHHHHHHHh
Confidence 2235677788887754 33332 234579999966 5799999999999999988764
No 48
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.84 E-value=4.5e-20 Score=174.39 Aligned_cols=249 Identities=10% Similarity=0.044 Sum_probs=157.3
Q ss_pred EEEEec--CCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccC
Q 046506 13 FRAIKT--TKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACIC 90 (310)
Q Consensus 13 v~~v~~--~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~ 90 (310)
++.++. ++. ++.+|+++|++++++. +|.+|++ +.++++ .+.|+++|+++|++||+++++|+||+.+....
T Consensus 166 ~~~v~~~~~~~-~~~iD~d~le~~i~~~-----~tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~ 237 (483)
T 1rv3_A 166 FESMAYKVNPD-TGYIDYDRLEENARLF-----HPKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVA 237 (483)
T ss_dssp SEEEEECBCTT-TCSBCHHHHHHHHHHH-----CCSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHH
T ss_pred EEEEECccccC-CCcCCHHHHHHHHhhc-----CCcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhccccc
Confidence 445554 643 4689999999999842 1446777 777766 88999999999999999999999998765543
Q ss_pred hhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchh-HHhhhccCCccccccccccccccCCC-CceeccCCCc-c
Q 046506 91 PEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSD-LVNSLSTNPEYLKNKATESKQVVDYK-DWQITLSRRF-R 167 (310)
Q Consensus 91 ~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~-~~~~~~~~~~y~~~~~~~~~~~~~~~-~~~~~~~~~~-~ 167 (310)
+..... +.++|++++++||+|.+|.| |+++++++.. +...-.....|-... ..+.. ....+++... .
T Consensus 238 ~~~~~p---~~~~div~~s~~K~l~Gprg-G~i~~~~~~~~~~~~~g~~~~y~~~~------~~~~~~~~~~~g~~~~~~ 307 (483)
T 1rv3_A 238 GVVPSP---FEHCHVVTTTTHKTLRGCRA-GMIFYRRGVRSVDPKTGKEILYNLES------LINSAVFPGLQGGPHNHA 307 (483)
T ss_dssp TSSCCG---GGTCSEEEEESSGGGCCCSC-EEEEEECSBCC-------CCBCCHHH------HHHHHHTTTTCCSCCHHH
T ss_pred CCCCCC---CCCCcEEEecCcccCCCCCc-eEEEEcchhhhhccccCcchhhHHHH------HhhhhcCCcccCCccHHH
Confidence 221111 12589999999999999998 9999887521 000000000000000 00000 0001222111 2
Q ss_pred hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC-CceEEEEEEcCCcchhhhhhhhccccchhHHHH
Q 046506 168 SLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR-HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERI 246 (310)
Q Consensus 168 ~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (310)
..++.++++.....+++++.++..++++++.+.|.+. |++++.+. ....+.+.+.+.+. +
T Consensus 308 iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~g~--------------~---- 368 (483)
T 1rv3_A 308 IAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVEL-GYKIVTGGSDNHLILVDLRSKGT--------------D---- 368 (483)
T ss_dssp HHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEEGGGGTC--------------C----
T ss_pred HHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhc-CCEeccCCCCCceEEEeccCCCC--------------C----
Confidence 3455567766666788999999999999999999987 89987542 23344454443110 0
Q ss_pred HHHHHHHHHHHHhcCcEEEE----EeE--ECCEeEEEEEccCCCCC----HHHHHHHHHHHHHHHHH
Q 046506 247 NEFNRELLESINASGKAYMT----HAV--LGGIYAIRFAAGATLTE----ERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 247 ~~~~~~l~~~l~~~g~~~~~----~~~--~~~~~~iRis~~~~~~t----~edi~~li~~l~~~~~~ 303 (310)
..++.+.|.+.| +.+. +.. ..+.+.+|+|++ .+|+ ++|++++++.|++++..
T Consensus 369 ---~~~~~~~L~~~g-I~v~~~~~pg~~~~~~~~~iRis~~-~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 369 ---GGRAEKVLEACS-IACNKNTCPGDKSALRPSGLRLGTP-ALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp ---HHHHHHHHHHTT-EECEEECCSSCSCTTSCCEEEEECH-HHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHhCC-cEEecCCCCCCCcCCCCceEEeecC-CcccCCCCHHHHHHHHHHHHHHHHh
Confidence 124555665666 4444 221 113568999976 4567 99999999999988765
No 49
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.84 E-value=1e-20 Score=171.97 Aligned_cols=242 Identities=14% Similarity=0.103 Sum_probs=160.1
Q ss_pred eecCCCCCCEEEEe--cCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeec
Q 046506 4 QIVGIDVKNFRAIK--TTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 4 ~~~g~~~~~v~~v~--~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
+..|+. ++.+| .+++ +.+|+++|+++|++.... ..+.++++++++|++|.+.|+++|+++|++||+++++|+
T Consensus 111 ~~~g~~---~~~v~~~~~~~--~~~d~~~l~~~l~~~~~~-~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~ 184 (371)
T 2e7j_A 111 ERAGLN---IALVPKTDYPD--YAITPENFAQTIEETKKR-GEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNG 184 (371)
T ss_dssp HHTTCE---EEEECCCCTTT--CCCCHHHHHHHHHHHTTT-SCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEEC
T ss_pred HHcCCe---EEEeecccCCC--CCcCHHHHHHHHHhhccc-CCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEEC
Confidence 445665 88999 7653 589999999999754211 125688999999999999999999999999999999999
Q ss_pred ccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHh-hhccCCccccccccccccccCCCCcee
Q 046506 82 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVN-SLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~-~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
+|+.+..+.+... . ++|+++.|+||++++|.++|+++++++ .+.. .......+... ..+
T Consensus 185 a~~~~~~~~~~~~-----~-~~di~~~s~sK~~~~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~-------------~~~ 244 (371)
T 2e7j_A 185 AYAIGRMPVSLKE-----I-GADFIVGSGHKSMAASGPIGVMGMKEE-WAEIVLRRSEKYKNKE-------------VEL 244 (371)
T ss_dssp TTTBTTBCCCHHH-----H-TCSEEEEEHHHHSSCCSSCEEEEECTT-TTTTTTCBCSSCTTSB-------------GGG
T ss_pred ccccCCCCCChhh-----c-CCCEEEecCCcCCCCCCCcEEEEEech-hhhhhccccccCcccc-------------ccc
Confidence 9988765432111 1 479999999999999989999998765 3222 11111111100 000
Q ss_pred ccCC-Ccc-hHHHHHHHHHhCHHHHHHHHHHH--HHHHHHHHHHHcCCCCeEEecCC--CceEEEEEEcCCcchhhhhhh
Q 046506 161 TLSR-RFR-SLKLWFVLRNYGVANLRHFLRSH--VNMAKLFERLVGSDKRFEVVFPR--HFAVVCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 161 ~~~~-~~~-~~~~~~~l~~~~~~~~~~~~~~~--~~~a~~l~~~L~~~~~~~v~~~~--~~~~v~~~~~~~~~~~~~~~~ 234 (310)
..+. ... ..++.++++.+.. ++.++. .++++++.+.|+++ ++++..++ ..+++++.+. +
T Consensus 245 ~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~--~-------- 309 (371)
T 2e7j_A 245 LGCTARGATIITLMASFPHVRE----RIKRWDEEVEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAE--V-------- 309 (371)
T ss_dssp TTCCCCSHHHHHHHHHHHHHHH----HGGGHHHHHHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECH--H--------
T ss_pred ccCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCccCceEEEECC--C--------
Confidence 1111 111 2233344443321 566777 88999999999987 89887553 4667767653 1
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE-C---C--EeEEE-EEccCCC-CCHHHHHHHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESINASGKAYMTHAVL-G---G--IYAIR-FAAGATL-TEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~---~--~~~iR-is~~~~~-~t~edi~~li~~l~~~~~~ 303 (310)
..++.+.|.+.|... .+... . + .+.+| +++. .. ++++++++++++|++++++
T Consensus 310 ---------------~~~~~~~l~~~gi~~-~~~~~~~~~~g~~~~~iRii~~~-~~~~~~~~i~~~~~~l~~~~~~ 369 (371)
T 2e7j_A 310 ---------------LYEISKKAKGGRFFL-YRELKSRKIHGIKPGLTRYFKLS-TYGLSDEEVDYVLNAFKEIIEK 369 (371)
T ss_dssp ---------------HHHHHHHSSSGGGHH-HHHHHHTTEECSCTTCCSEEEEE-CTTCCHHHHHHHHHHHHHHHHH
T ss_pred ---------------HHHHHHHHHHCCEEE-EeccccccccCCCCCceEEEEee-ccCCCHHHHHHHHHHHHHHHHh
Confidence 124555555444322 11100 0 1 46789 9966 45 8999999999999988764
No 50
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.83 E-value=1.7e-20 Score=172.26 Aligned_cols=247 Identities=13% Similarity=0.081 Sum_probs=144.4
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccccc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAG 85 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~ 85 (310)
.|.. ++.+|.+++ +.+|+++|+++|++. +.++++++.+|++|.+.|+++|+++|++||+++++|++|+.
T Consensus 132 ~g~~---~~~v~~~~~--~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~ 200 (400)
T 3vax_A 132 RGFE---VDFLTPGPS--GRISVEGVMERLRPD------TLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGY 200 (400)
T ss_dssp TTCE---EEEECCCTT--CCCCHHHHHTTCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTT
T ss_pred cCCe---EEEEccCCC--CCcCHHHHHHhcCCC------ceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhc
Confidence 3555 899999864 589999999999754 56889999999999999999999999999999999999986
Q ss_pred ccccChhhhhhhcCCCCCCeeeeecccccccccceEEEE-EeCchhHHhhhccCCccccccccccccccCCCCceeccCC
Q 046506 86 SACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLW-VKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSR 164 (310)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~-v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 164 (310)
+....+ .... +|+++.++||+ ++|.|+|+++ ++++.......... +++..... ...+..+.
T Consensus 201 ~~~~~~-----~~~~--~d~~~~s~~K~-~g~~g~g~~~~~~~~~~~~~~~~~~-~~~~~~~~---------~~~~~~~~ 262 (400)
T 3vax_A 201 GKVPGD-----LTTP--IDMISISGHKI-GAPKGVGALVTRRREEMDDERVPLE-PIMFGGGQ---------ERKLRPGT 262 (400)
T ss_dssp TTSGGG-----GGSC--CSEEEEETGGG-TSCSSCEEEEECBCSSSTTCBCCCC-CSSCSSCT---------GGGTSCSC
T ss_pred CCCCcC-----hhhc--CcEEEEeHHHh-CCCCceEEEEEecchhccccccccC-ceecCCCc---------eeeeecCC
Confidence 654332 1222 89999999995 5688999999 88743210000011 11111100 00011111
Q ss_pred -C-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC---ceEEEEEEcCCcchhhhhhhhcccc
Q 046506 165 -R-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH---FAVVCFRVSPSAVMDKLKTKYENSL 239 (310)
Q Consensus 165 -~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~ 239 (310)
. ....++.++++.+ .++++++.++..++++++.+.|+ .+++++..++. .+++.|.+.+.+
T Consensus 263 ~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 327 (400)
T 3vax_A 263 LPVPLIMGLAEAAKIF-EAEHAQWQVAAQDLRSRLLAGLA-STSFQVNGDQDHVVPHILNLSFEDVD------------- 327 (400)
T ss_dssp CCHHHHHHHHHHHHHH-HHSHHHHHHHHHHHHHHHHHHHT-TTTCEECSCTTSBCTTEEEEECTTCC-------------
T ss_pred CCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHhhC-CCCEEEeCCcccCCCCEEEEEeCCCC-------------
Confidence 1 1122333444433 34678899999999999999999 88999875543 357777765421
Q ss_pred chhHHHHHHHHHHH-HHHHHhcCcEEEEEeEE--------C-C----EeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 240 LSEEERINEFNREL-LESINASGKAYMTHAVL--------G-G----IYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 240 ~~~~~~~~~~~~~l-~~~l~~~g~~~~~~~~~--------~-~----~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
. ..+.+.+ .+.+...|..+...... + . .+.+|+++++..++++|+++++++|+++++
T Consensus 328 --~----~~l~~~L~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~ 398 (400)
T 3vax_A 328 --A----EAFLVTLKDLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKP 398 (400)
T ss_dssp --H----HHHHHHHHHHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC-------------------
T ss_pred --H----HHHHHHHhcCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhc
Confidence 1 1111111 33444455444332100 0 0 378999972357899999999999998764
No 51
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.83 E-value=2.3e-20 Score=168.53 Aligned_cols=240 Identities=13% Similarity=0.061 Sum_probs=154.2
Q ss_pred CCCCCCEEEEecCCCCCcccCHHHHHH-HHHHHH-HcCCCcEEEEEeccCCcccc---cCChHHHHHHHHHhCcEEEeec
Q 046506 7 GIDVKNFRAIKTTKSSSYGLSPDSLMA-KINSDV-EAGLIPLFLCATIGTTAITA---VDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 7 g~~~~~v~~v~~~~~~~~~id~~~Le~-~i~~~~-~~~~~~~~v~~~~~~~~~G~---~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
|.. ++.+|.+ .+.+|+++|++ +|++.. ..+..+.+|++++.++ +|. .+++++|+++|++||+++|+|+
T Consensus 108 g~~---~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~ 180 (356)
T 1v72_A 108 GAK---LMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDG 180 (356)
T ss_dssp SCE---EEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CcE---EEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEc
Confidence 665 7888875 35899999999 886421 0111256777777554 999 5668999999999999999999
Q ss_pred ccccccccChhhhhhhcCC-CCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 82 AYAGSACICPEFRHFIDGV-EGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~-~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
+|+.+............++ .++|++++++||+ +.|.|+|+++. +++.+....... .+... .
T Consensus 181 a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~~~~-~~~~~~~~~~~~-~~~~~---------------~ 242 (356)
T 1v72_A 181 SRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEAIVLF-NTSLATEMSYRR-KRAGH---------------L 242 (356)
T ss_dssp TTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEEEEES-SGGGHHHHHHHH-HHTTC---------------C
T ss_pred hhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccEEEEE-CHHHHhhHHHHh-hccCc---------------h
Confidence 9975432111101001111 2589999999999 67888888876 444433221000 00000 0
Q ss_pred ccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccc
Q 046506 161 TLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLL 240 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
..........++..+....+.++.++..++++++.+.|++++++++..++..+++.+.+.
T Consensus 243 ---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~----------------- 302 (356)
T 1v72_A 243 ---SSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD----------------- 302 (356)
T ss_dssp ---CSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC-----------------
T ss_pred ---hhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC-----------------
Confidence 001122333345555445577788888999999999999888999876666777766552
Q ss_pred hhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 241 SEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 241 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.++.+.|.++|.....+. +. .+++|++++ +.++++|+++++++|++++++.
T Consensus 303 ----------~~~~~~l~~~gi~v~~g~-~~-~~~iRi~~~-~~~~~~~i~~~~~~l~~~l~~~ 353 (356)
T 1v72_A 303 ----------SAMIDALLKAGFGFYHDR-WG-PNVVRFVTS-FATTAEDVDHLLNQVRLAADRT 353 (356)
T ss_dssp ----------HHHHHHHHHTTCBCBCSS-SS-TTEEEEECC-TTCCHHHHHHHHHHHHHTC---
T ss_pred ----------HHHHHHHHhcCeEEeccc-cC-CCeEEEEec-CCCCHHHHHHHHHHHHHHHHhh
Confidence 146666767775443222 22 568999944 6789999999999999876553
No 52
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.83 E-value=4.5e-19 Score=164.81 Aligned_cols=231 Identities=14% Similarity=0.030 Sum_probs=156.0
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhh--cCC-CC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI--DGV-EG 102 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~--~~~-~~ 102 (310)
+|+++|+++|++... ..+.+|+++..+|++|.+.|+++|+++|++||+++++|++|+.+.+... ..... .++ .+
T Consensus 178 ~d~~~le~~l~~~~~--~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~-g~~~~~~~~~~~~ 254 (427)
T 2w8t_A 178 NSVEDLDKRLGRLPK--EPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPN-GRGVYEAQGLEGQ 254 (427)
T ss_dssp TCHHHHHHHHHTSCS--SSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTT-SCCHHHHTTCTTC
T ss_pred CCHHHHHHHHHhccC--CCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCC-CCchHhhcCCCcC
Confidence 689999999976311 1256888888899999999999999999999999999999987765311 11111 111 25
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC-cchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~ 181 (310)
+|+++.++||+++ +.| |+++.+ ++.+........+|... ++.. ....++.++++.+.
T Consensus 255 ~di~~~s~sK~~g-~~g-G~v~~~-~~l~~~l~~~~~~~~~~-----------------~~~~~~~~aa~~~al~~~~-- 312 (427)
T 2w8t_A 255 IDFVVGTFSKSVG-TVG-GFVVSN-HPKFEAVRLACRPYIFT-----------------ASLPPSVVATATTSIRKLM-- 312 (427)
T ss_dssp CSEEEEESSSTTC-SCC-EEEEEC-CTTGGGGGGTCHHHHSS-----------------CCCCHHHHHHHHHHHHHHT--
T ss_pred CcEEEecchhhhc-cCC-CEEEeC-HHHHHHHHHhccccccc-----------------CCCCHHHHHHHHHHHHHHh--
Confidence 8999999999997 445 777665 43432221111122211 1111 12233334555432
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC-CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhc
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR-HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINAS 260 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 260 (310)
..+++.++..++++++.+.|+++ ++++..++ ..+++.+.+.. .....++.+.|.++
T Consensus 313 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~----------------------~~~~~~l~~~L~~~ 369 (427)
T 2w8t_A 313 TAHEKRERLWSNARALHGGLKAM-GFRLGTETCDSAIVAVMLED----------------------QEQAAMMWQALLDG 369 (427)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHH-TCEESCSSCCSSEEEEEESS----------------------HHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCCCEEEEEECC----------------------HHHHHHHHHHHHHC
Confidence 24778888999999999999887 88887455 67778777753 12235677788888
Q ss_pred CcEEEEEeE----ECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 261 GKAYMTHAV----LGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 261 g~~~~~~~~----~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
|. ++.+.. ..+..++|++++ ..++++|+++++++|+++++++.+
T Consensus 370 Gi-~v~~~~~~~~~~~~~~lRi~~~-~~~t~e~i~~~~~~l~~~l~~~~~ 417 (427)
T 2w8t_A 370 GL-YVNMARPPATPAGTFLLRCSIC-AEHTPAQIQTVLGMFQAAGRAVGV 417 (427)
T ss_dssp TE-ECEEECTTTSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHHTC
T ss_pred Ce-EEeeeCCCCCCCCCeEEEEEeC-CCCCHHHHHHHHHHHHHHHHHhCc
Confidence 74 444332 124579999966 568999999999999999887644
No 53
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.83 E-value=6.5e-19 Score=161.92 Aligned_cols=232 Identities=15% Similarity=0.080 Sum_probs=152.6
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccc-c-ChhhhhhhcCCCCC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSAC-I-CPEFRHFIDGVEGA 103 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~-~-~~~~~~~~~~~~~~ 103 (310)
+|+++|+++|++....+..+.+|++++++|++|.+.|+++|.++|++||+++++|++|+.+.. . .........-..+.
T Consensus 159 ~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~ 238 (401)
T 1fc4_A 159 NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRV 238 (401)
T ss_dssp TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCC
T ss_pred CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCC
Confidence 578999999987543222356888899999999999999999999999999999999964443 1 11111111111247
Q ss_pred CeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC-cchHHHHHHHHHhCHHH
Q 046506 104 DSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 104 D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~ 182 (310)
|+++.++||+++++.| |+++.+ ++.+........++.. ..+.. .....+.++++.+. .
T Consensus 239 di~~~s~sK~~~~~~g-G~~~~~-~~~~~~l~~~~~~~~~-----------------~~~~~~~~~~a~~~~l~~~~--~ 297 (401)
T 1fc4_A 239 DIITGTLGKALGGASG-GYTAAR-KEVVEWLRQRSRPYLF-----------------SNSLAPAIVAASIKVLEMVE--A 297 (401)
T ss_dssp SEEEEESSSTTCSSSC-EEEEEC-HHHHHHHHHHCHHHHH-----------------SCCCCHHHHHHHHHHHHHHH--T
T ss_pred cEEEecchhhccCCCC-EEEEcC-HHHHHHHHHhCcCcee-----------------CCCCCHHHHHHHHHHHHHHh--c
Confidence 9999999999966666 777764 5444332221111111 00111 12223333444331 1
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCc
Q 046506 183 LRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGK 262 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 262 (310)
.+++.++..++++++.+.|+++ ++++. ++..+++.+.+.. .....++.+.|.++|.
T Consensus 298 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~----------------------~~~~~~l~~~l~~~gi 353 (401)
T 1fc4_A 298 GSELRDRLWANARQFREQMSAA-GFTLA-GADHAIIPVMLGD----------------------AVVAQKFARELQKEGI 353 (401)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT-TCCBC-CSSSSEEEEEEEC----------------------HHHHHHHHHHHHHTTE
T ss_pred CHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCCCEEEEEcCC----------------------hHHHHHHHHHHHHCCc
Confidence 4677888899999999999887 77766 5567777777743 1122467777877774
Q ss_pred EEEEEeEE----CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 263 AYMTHAVL----GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 263 ~~~~~~~~----~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.+.+... .+..++|++++ ..+++++++.++++|+++++++
T Consensus 354 -~v~~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~ 397 (401)
T 1fc4_A 354 -YVTGFFYPVVPKGQARIRTQMS-AAHTPEQITRAVEAFTRIGKQL 397 (401)
T ss_dssp -ECCEECTTSSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHT
T ss_pred -EEeeecCCCCCCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 4333221 23578999966 5689999999999999988765
No 54
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.82 E-value=6.5e-20 Score=167.74 Aligned_cols=251 Identities=9% Similarity=0.055 Sum_probs=161.9
Q ss_pred ceecCCCCCCEEEEecC-CCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCccccc---CChHHHHHHHHHhCcEEE
Q 046506 3 AQIVGIDVKNFRAIKTT-KSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAV---DTLKPLCDVAKQFGIWVH 78 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~-~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~---~pl~~I~~l~~~~g~~l~ 78 (310)
++..|.. ++.+|.+ +++.+.+|+++|+++|++. .+.+|++++++|++|.+ .++++|+++|++||++++
T Consensus 126 ~~~~g~~---~~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 197 (391)
T 3dzz_A 126 IEGNGRR---VISSDLIYENSKYSVNWADLEEKLATP-----SVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLI 197 (391)
T ss_dssp HHHTTCE---EEECCCEEETTEEECCHHHHHHHHTST-----TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHcCCE---EEEeeeeecCCceeecHHHHHHHHhcc-----CceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEE
Confidence 3445665 8888886 2345669999999999732 25578888999999999 779999999999999999
Q ss_pred eecccccccccChhhhhhhcC-CCCCC--eeeeecccccc-cccceEEEEEeCchhHHhhhccCCccccccccccccccC
Q 046506 79 VDAAYAGSACICPEFRHFIDG-VEGAD--SFSLNAHKWFF-TTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVD 154 (310)
Q Consensus 79 vD~a~~~~~~~~~~~~~~~~~-~~~~D--~~~~~~hK~l~-~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 154 (310)
+|++|+.+............. ....| +++.|+||+++ ....+|+++++++............+. ..
T Consensus 198 ~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~-~~--------- 267 (391)
T 3dzz_A 198 SDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESFFLAG-IG--------- 267 (391)
T ss_dssp EECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHHHHHHT-CS---------
T ss_pred EecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHHHHhhc-cC---------
Confidence 999997655432111111110 01256 88899999996 345678887765644322211000000 00
Q ss_pred CCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcC-CCCeEEecCCCceEEEEEEcCCcchhhhhh
Q 046506 155 YKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGS-DKRFEVVFPRHFAVVCFRVSPSAVMDKLKT 233 (310)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~-~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~ 233 (310)
+.-.....++.+++.. +.+.++++.++..++++++.+.|++ +|++++..+.....+.+.+.....
T Consensus 268 -------~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 333 (391)
T 3dzz_A 268 -------EPNLLAIPAAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISALGM------ 333 (391)
T ss_dssp -------SCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGGCS------
T ss_pred -------CCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEeccCceEEEEEehhhcCC------
Confidence 0011222333444443 4566888999999999999999998 899988744333334455543110
Q ss_pred hhccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEe-EE--CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 234 KYENSLLSEEERINEFNRELLESIN-ASGKAYMTHA-VL--GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~-~~--~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+ ..++.+.|. +.|. .+.+. .. .+.+++|+|++ +++++++.+++.|+++++++
T Consensus 334 --------~-------~~~~~~~l~~~~gi-~v~~g~~~~~~~~~~iRis~~---~~~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 334 --------N-------AEDFCKYLREKTGL-IISAGNGYRGNGHEFVRINLA---CPKELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp --------C-------HHHHHHHHHHHHCE-ECEESGGGCTTGGGEEEEECC---SCHHHHHHHHHHHHHHHHTC
T ss_pred --------C-------HHHHHHHHHHhCCE-EEeCchhhCCCCCCEEEEEec---CCHHHHHHHHHHHHHHHHHh
Confidence 0 145667775 5664 44432 12 23579999955 58999999999999887654
No 55
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.81 E-value=1.2e-19 Score=165.01 Aligned_cols=254 Identities=12% Similarity=0.046 Sum_probs=155.1
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
...|+. ++++|.++++ .+|+++|+++|++. +.+|++++. +|.+.|+++|+++|++||+++++|++|
T Consensus 92 ~~~g~~---~~~~~~~~~~--~~d~~~l~~~i~~~------~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~ 157 (375)
T 2fnu_A 92 LESGYT---PVFAGIKNDG--NIDELALEKLINER------TKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSH 157 (375)
T ss_dssp HHTTCE---EEECCBCTTS--SBCGGGSGGGCCTT------EEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTT
T ss_pred HHCCCE---EEEeccCCCC--CCCHHHHHhhcCcC------ceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECcc
Confidence 345666 8899998753 79999999998653 345555554 899999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeC-chhHHhhhccCCccccccccccccccCCCCceecc
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKD-PSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITL 162 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~-~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 162 (310)
+.+...... . ......++++++++||++ +| |.|++++.+ ++......... ....... ..+.+. ....
T Consensus 158 ~~~~~~~~~--~-~~~~~~i~~~s~s~~K~~-~~-g~g~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~--~~~~ 225 (375)
T 2fnu_A 158 ALGSEYQNK--K-VGGFALASVFSFHAIKPI-TT-AEGGAVVTNDSELHEKMKLFR----SHGMLKK-DFFEGE--VKSI 225 (375)
T ss_dssp CTTCEETTE--E-TTSSSSEEEEECCTTSSS-CC-SSCEEEEESCHHHHHHHHHHT----BTTEEES-SSSCEE--ESSC
T ss_pred ccCCeECCe--e-ccccCCeEEEeCCCCCCc-cc-cCceEEEeCCHHHHHHHHHHH----hcCCccc-cccccc--cccc
Confidence 876544221 1 111223566677788998 45 789888854 44332221110 0000000 000000 0001
Q ss_pred CCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC-----CceEEEEEEcCCcchhhhhhhhcc
Q 046506 163 SRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR-----HFAVVCFRVSPSAVMDKLKTKYEN 237 (310)
Q Consensus 163 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~ 237 (310)
+.++....+.+++.....++++++.++..++++++.+.|+++|++++..++ ...++.+.+.....
T Consensus 226 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 295 (375)
T 2fnu_A 226 GHNFRLNEIQSALGLSQLKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFF---------- 295 (375)
T ss_dssp CCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGG----------
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCcccc----------
Confidence 111122222233333334677888999999999999999999899887542 12233455543100
Q ss_pred ccchhHHHHHHHHHHHHHHHHhcCcEEEE---EeE----EC--------------CEeEEEEEccCCCCCHHHHHHHHHH
Q 046506 238 SLLSEEERINEFNRELLESINASGKAYMT---HAV----LG--------------GIYAIRFAAGATLTEERHVMVAWTV 296 (310)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~~----~~--------------~~~~iRis~~~~~~t~edi~~li~~ 296 (310)
. ...++.+.|.+.|..... +.. +. ....+|++++ +++|++|+++++++
T Consensus 296 ---------~-~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~-~~~t~~~i~~~~~~ 364 (375)
T 2fnu_A 296 ---------T-CKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCH-ANLNLESVQNIAHS 364 (375)
T ss_dssp ---------G-GHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCC-TTCCHHHHHHHHHH
T ss_pred ---------c-hHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCC-CCCCHHHHHHHHHH
Confidence 0 114566777777643221 100 00 1268999955 67999999999999
Q ss_pred HHHHHHHH
Q 046506 297 VQEHLEAL 304 (310)
Q Consensus 297 l~~~~~~~ 304 (310)
|++++.++
T Consensus 365 l~~~~~~~ 372 (375)
T 2fnu_A 365 VLKTFESF 372 (375)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99988764
No 56
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.81 E-value=6.9e-19 Score=158.84 Aligned_cols=242 Identities=13% Similarity=0.110 Sum_probs=154.0
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHH-HcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEE
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDV-EAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVH 78 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~-~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~ 78 (310)
++..|+. ++.+|.+ ++.+|+++|+++|++.. ..+..+.+|++++. |++|.+.| +++|+++|++||+++|
T Consensus 109 ~~~~g~~---~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~~li 181 (359)
T 1svv_A 109 IEATGHK---VVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELEDISASCKEHGLYLF 181 (359)
T ss_dssp HHHTTCC---EEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HhcCCCe---eEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHHHHHHHHHHhCCEEE
Confidence 3455666 8999986 35899999999998641 11112457777776 67999998 9999999999999999
Q ss_pred eecccccc---cccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCC
Q 046506 79 VDAAYAGS---ACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDY 155 (310)
Q Consensus 79 vD~a~~~~---~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 155 (310)
+|++|..+ ....+...-... ..+|++++++||+ ++|.|+|+++++++ .+..... +......
T Consensus 182 ~De~~~~~~~~~~~~~~~~~~~~--~~~d~~~~s~~K~-g~~~~~g~l~~~~~-~~~~~~~----~~~~~~~-------- 245 (359)
T 1svv_A 182 LDGARLASALSSPVNDLTLADIA--RLTDMFYIGATKA-GGMFGEALIILNDA-LKPNARH----LIKQRGA-------- 245 (359)
T ss_dssp EECTTHHHHHTSTTCCCCHHHHH--HHCSEEEEECTTT-TCSSCEEEEECSGG-GCTTHHH----HHHHTTC--------
T ss_pred EEccchhhhhcCCCcchhhhhhh--hcCCEEEEecccC-CCCCceEEEEEccc-HHHHHHH----HHhcCCc--------
Confidence 99999432 221111000000 1489999999998 55888998887544 3211110 0000000
Q ss_pred CCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhh
Q 046506 156 KDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
....+.+ .... ....+...+++++.++..++++++.+.| +.+++++..+...+++.+.+.
T Consensus 246 ---~~~~~~~-~~~~---~~~~l~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~~~~~~~~~------------ 305 (359)
T 1svv_A 246 ---LMAKGWL-LGIQ---FEVLMKDNLFFELGAHSNKMAAILKAGL-EACGIRLAWPSASNQLFPILE------------ 305 (359)
T ss_dssp ---CCTTTHH-HHHH---HHHHTSTTHHHHHHHHHHHHHHHHHHHH-HHTTCCBSSCCSSSEECBEEE------------
T ss_pred ---ccccchh-hHHH---HHHHHhhhhHHHHHHHHHHHHHHHHHHh-ccCCeEEccCCccceEEEEcC------------
Confidence 0000000 1111 1223445577889999999999999999 567888775555665544332
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhc-CcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINAS-GKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.++.+.|.++ |... .+....+.+++|++++ +.++++|+++++++|+++++++
T Consensus 306 ---------------~~~~~~l~~~~gi~v-~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~ 358 (359)
T 1svv_A 306 ---------------NTMIAELNNDFDMYT-VEPLKDGTCIMRLCTS-WATEEKECHRFVEVLKRLVAST 358 (359)
T ss_dssp ---------------HHHHHHHTTTEECEE-EEEETTTEEEEEEECC-TTCCHHHHHHHHHHHHHC----
T ss_pred ---------------HHHHHHHHHhcCEEE-EecccCCCceEEEEcc-CcCCHHHHHHHHHHHHHHHhcc
Confidence 2567778777 6544 2222235789999954 6789999999999999876543
No 57
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.80 E-value=3.7e-18 Score=160.80 Aligned_cols=237 Identities=9% Similarity=0.030 Sum_probs=151.8
Q ss_pred EEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhh
Q 046506 15 AIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFR 94 (310)
Q Consensus 15 ~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~ 94 (310)
.+++++. ++.+|+++|++++.+.+ |.+|++.. +..|...|+++|+++|++||+++|+|+||+.+........
T Consensus 180 ~~~vd~~-~~~iD~d~le~~l~~~~-----~klIi~~~--s~~~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~ 251 (490)
T 2a7v_A 180 PYKLNPK-TGLIDYNQLALTARLFR-----PRLIIAGT--SAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIP 251 (490)
T ss_dssp -CCBCTT-TCSBCHHHHHHHHHHHC-----CSEEEECC--SSCCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSC
T ss_pred ecccccc-cCCcCHHHHHHHHhhcC-----CcEEEEcC--CCCCCcccHHHHHHHHHHcCCEEEEccccccccccCCcCC
Confidence 4445542 46999999999997632 44555433 3346678999999999999999999999976654322111
Q ss_pred hhhcCCCCCCeeeeecccccccccceEEEEEeCch-------------hHHhhhccCCccccccccccccccCCCCceec
Q 046506 95 HFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPS-------------DLVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 95 ~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~-------------~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
.. +.++|++++++||+|++|.| |+++.++.. .+.+.+. ..++. ..+
T Consensus 252 ~~---~~~aDiv~~S~hK~l~Gp~G-G~i~~~~~~~~~~~~~~~~~~~~l~~~i~---~~~~~--------------g~q 310 (490)
T 2a7v_A 252 SP---FKHADIVTTTTHKTLRGARS-GLIFYRKGVKAVDPKTGREIPYTFEDRIN---FAVFP--------------SLQ 310 (490)
T ss_dssp CG---GGTCSEEEEESSGGGCSCSC-EEEEEECSEEEEETTTEEEEECCCHHHHH---HHHTT--------------TTC
T ss_pred CC---CCCCCEEEECCcccCccccc-hheeeccchhcccccccchhhHHHHHHHH---HHhcc--------------cCC
Confidence 11 12599999999999999987 787777641 0111110 00000 112
Q ss_pred cCCCcc-hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC-CCceEEEEEEcCCcchhhhhhhhcccc
Q 046506 162 LSRRFR-SLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP-RHFAVVCFRVSPSAVMDKLKTKYENSL 239 (310)
Q Consensus 162 ~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~ 239 (310)
++.... ..++.+++.....+.++++.++..++++++++.|.+. |++++.+ ..++++.+.+.+....
T Consensus 311 ggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~-G~~v~~~~t~t~lv~vdl~~~g~~----------- 378 (490)
T 2a7v_A 311 GGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHLVLVDLRPKGLD----------- 378 (490)
T ss_dssp CSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECTTTTCC-----------
T ss_pred CCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCCCeEEEEEeCCCCCC-----------
Confidence 222222 2334445554434566888999999999999999986 9998753 4567777777653210
Q ss_pred chhHHHHHHHHHHHHHHHHhcCcEEEEEeE-E-----CCEeEEEEEc---cCCCCCHHHHHHHHHHHHHHHHH
Q 046506 240 LSEEERINEFNRELLESINASGKAYMTHAV-L-----GGIYAIRFAA---GATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 240 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~-----~~~~~iRis~---~~~~~t~edi~~li~~l~~~~~~ 303 (310)
..++.+.|.+.|+ .+.... + .....||++. ++...+++|++++.+.|.+++..
T Consensus 379 ----------~~~~~~~L~~~GI-~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~ 440 (490)
T 2a7v_A 379 ----------GARAERVLELVSI-TANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNI 440 (490)
T ss_dssp ----------HHHHHHHHHHTTE-ECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ----------HHHHHHHHHhCCe-EEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHHh
Confidence 1345666666664 444321 1 1246899963 23457899999999999888753
No 58
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.80 E-value=5.8e-19 Score=164.08 Aligned_cols=255 Identities=13% Similarity=0.058 Sum_probs=164.2
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|+. ++.+|.++.+.+.+|+++|+++|++. +..+++.+++|++|.+.| +++|+++|++||+++++
T Consensus 159 ~~~~g~~---~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~ 229 (427)
T 3dyd_A 159 AESMGIE---VKLYNLLPEKSWEIDLKQLEYLIDEK------TACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILA 229 (427)
T ss_dssp HHHTTCE---EEEEEEEGGGTTEECHHHHHSSCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHcCCE---EEEEecccccCCCCCHHHHHHHhccC------CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 3456776 88899876445689999999999653 457888889999999999 99999999999999999
Q ss_pred ecccccccccChhhhhhhcCC-CCCC-eeeeecccccccc-cceEEEEEeCch-----hHHhhhccCCcccccccccccc
Q 046506 80 DAAYAGSACICPEFRHFIDGV-EGAD-SFSLNAHKWFFTT-LDCCCLWVKDPS-----DLVNSLSTNPEYLKNKATESKQ 151 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~-~~~D-~~~~~~hK~l~~p-~g~g~l~v~~~~-----~~~~~~~~~~~y~~~~~~~~~~ 151 (310)
|++|+.+.......... ..+ ...+ +++.|+||.++.| ..+|+++++++. .+...+.. +.....
T Consensus 230 Deay~~~~~~g~~~~~~-~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~---~~~~~~----- 300 (427)
T 3dyd_A 230 DEIYGDMVFSDCKYEPL-ATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVK---LSQRIL----- 300 (427)
T ss_dssp ECTTTTCBCSSCCCCCG-GGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHH---HHHHHC-----
T ss_pred EcCchhhccCCCcCccH-HHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHHHHH---HHhccC-----
Confidence 99997654332111110 011 1122 4557999986654 347888887641 11111110 000000
Q ss_pred ccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhh
Q 046506 152 VVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKL 231 (310)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~ 231 (310)
+.-.....++.++++....++++++.++..++++++.+.|+++|++.+..+.....+.+.+......
T Consensus 301 ----------~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~~g~~~~~~l~~~~~~--- 367 (427)
T 3dyd_A 301 ----------GPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEHFP--- 367 (427)
T ss_dssp ----------CSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCSBTTEEEEEECGGGCT---
T ss_pred ----------CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEecCHhhcC---
Confidence 0001123344445554456778899999999999999999999999887555555666666521000
Q ss_pred hhhhccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 232 KTKYENSLLSEEERINEFNRELLESIN-ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
.. ....++.+.|. +.|.+...+......+++|+++. +++++++.+++.|++++++++
T Consensus 368 ---------~~-----~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~---~~~e~i~~~l~~l~~~l~~~~ 425 (427)
T 3dyd_A 368 ---------EF-----ENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVIT---VPEVMMLEACSRIQEFCEQHY 425 (427)
T ss_dssp ---------TC-----SSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESC---SCHHHHHHHHHHHHHHHHHHC
T ss_pred ---------CC-----CCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEEC---CCHHHHHHHHHHHHHHHHHhh
Confidence 00 00134556664 55644433333334578999954 689999999999999887764
No 59
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.80 E-value=1.2e-18 Score=172.24 Aligned_cols=261 Identities=12% Similarity=0.047 Sum_probs=165.6
Q ss_pred eecCCCCCCEEEEecCCCCC---ccc-----CHHHHHHHHHHH--HH--cCCCcEEEEEeccCCcccccCChHHHHHHHH
Q 046506 4 QIVGIDVKNFRAIKTTKSSS---YGL-----SPDSLMAKINSD--VE--AGLIPLFLCATIGTTAITAVDTLKPLCDVAK 71 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~---~~i-----d~~~Le~~i~~~--~~--~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~ 71 (310)
...|.. +++++++.++- +.+ |+++|+++|++. ++ .+..|.+++++++ |.+|.+.|+++|+++|+
T Consensus 263 ~~~G~~---~v~v~~~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~ 338 (755)
T 2vyc_A 263 MLTGAK---PVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLE 338 (755)
T ss_dssp HHHCCE---EEEECCCBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHT
T ss_pred HHcCCE---EEEEeCCCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHH
Confidence 345665 88888865310 235 999999999863 11 2333456777765 67999999999999999
Q ss_pred HhCcEEEeecccccccccChhhhhhhcCCCC--CCe------eeeecccccccccceEEEEEeCc--hhHHhhhccCCcc
Q 046506 72 QFGIWVHVDAAYAGSACICPEFRHFIDGVEG--ADS------FSLNAHKWFFTTLDCCCLWVKDP--SDLVNSLSTNPEY 141 (310)
Q Consensus 72 ~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~--~D~------~~~~~hK~l~~p~g~g~l~v~~~--~~~~~~~~~~~~y 141 (310)
+||+++|||+||+++....+.+++. ..+.+ +|+ ++.|+||++++|.++|++++++. ..-...+......
T Consensus 339 ~~~~~livDeA~~~~~~~~~~~~~~-~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~~~~ 417 (755)
T 2vyc_A 339 KTSDRLHFDEAWYGYARFNPIYADH-YAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMM 417 (755)
T ss_dssp TTCSEEEEECTTCTTGGGCGGGTTS-SSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHHHHH
T ss_pred HcCCEEEEECcCchhcccCcccCCc-chhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHHHHHH
Confidence 9999999999997654444332111 11124 687 99999999999999999998866 1100111000000
Q ss_pred ccccccccccccCCCCceeccCCC--cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCC---------eEEe
Q 046506 142 LKNKATESKQVVDYKDWQITLSRR--FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKR---------FEVV 210 (310)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~---------~~v~ 210 (310)
++.+.+ ...+++.++++.+..++.++++++..++++++++.|.++++ ++++
T Consensus 418 ------------------~~s~sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~ 479 (755)
T 2vyc_A 418 ------------------HATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPW 479 (755)
T ss_dssp ------------------TSCSSCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEES
T ss_pred ------------------hCCCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeecc
Confidence 011111 12345556666666665678899999999999999998877 7776
Q ss_pred cCCC-------------------------------------------------ceEEEEEEcCCcchhhhhhhhccccch
Q 046506 211 FPRH-------------------------------------------------FAVVCFRVSPSAVMDKLKTKYENSLLS 241 (310)
Q Consensus 211 ~~~~-------------------------------------------------~~~v~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
++.. ...+++...+.+.. +.+.+. -.
T Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~----G~~~~~-g~ 554 (755)
T 2vyc_A 480 NKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGED----GELEET-GV 554 (755)
T ss_dssp SCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTT----SSBCSS-CC
T ss_pred CchhccccccccccccccccchhccchhhhhccCcccccccccccCCCccccCCeEEEEEcCCCCCC----CCcccc-CC
Confidence 5421 12445555431100 000000 00
Q ss_pred hHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 242 EEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 242 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+ ...+.+.|.+.|+ .+... +.+.+|++++ +.+|++++++++++|+++.+..
T Consensus 555 ~-------~~~l~~~L~~~gI-~~e~~---~~~~v~~~~~-~g~t~~~~~~l~~al~~~~~~~ 605 (755)
T 2vyc_A 555 P-------AALVTAWLGRHGI-VPTRT---TDFQIMFLFS-MGVTRGKWGTLVNTLCSFKRHY 605 (755)
T ss_dssp C-------HHHHHHHHHTTTC-CCSEE---CSSEEEEECC-TTCCTTTTHHHHHHHHHHHHHH
T ss_pred c-------HHHHHHHHHHCCC-EEeec---CCCeEEEEEC-CCCCHHHHHHHHHHHHHHHHhh
Confidence 0 1356666766653 33221 4568899955 8899999999999999997654
No 60
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.80 E-value=1.4e-18 Score=159.87 Aligned_cols=238 Identities=11% Similarity=0.057 Sum_probs=155.0
Q ss_pred EEEEec--CCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccC
Q 046506 13 FRAIKT--TKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACIC 90 (310)
Q Consensus 13 v~~v~~--~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~ 90 (310)
+..++. +++ .+.+|+++|+++|++.. +.+|++..+++ |.+.|+++|+++|++||+++++|++|+.+....
T Consensus 136 ~~~~~~~~~~~-~~~~d~~~l~~~l~~~~-----~~~v~~~~p~~--~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~ 207 (407)
T 2dkj_A 136 YKVVSYGVRPD-TELIDLEEVRRLALEHR-----PKVIVAGASAY--PRFWDFKAFREIADEVGAYLVVDMAHFAGLVAA 207 (407)
T ss_dssp SEEEEECCCTT-TSSCCHHHHHHHHHHHC-----CSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHT
T ss_pred EEEEecCCCcc-cCccCHHHHHHHHhhcC-----CeEEEEecccc--CCCCCHHHHHHHHHHcCCEEEEEcccccccccc
Confidence 344444 432 46899999999997521 33555533333 578899999999999999999999998755433
Q ss_pred hhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCc-chH
Q 046506 91 PEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRF-RSL 169 (310)
Q Consensus 91 ~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 169 (310)
.... ..+..+|+++.|+||+++++.+ |+++++++............+.. ++... ...
T Consensus 208 ~~~~---~~~~~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~l~~~~~~~~~------------------~~~~~~~~~ 265 (407)
T 2dkj_A 208 GLHP---NPLPYAHVVTSTTHKTLRGPRG-GLILSNDPELGKRIDKLIFPGIQ------------------GGPLEHVIA 265 (407)
T ss_dssp TCSC---CCTTTCSEEEEESSGGGCCCSC-EEEEESCHHHHHHHHHHHTTTTC------------------SSCCHHHHH
T ss_pred CccC---CccccccEEEEeccccCCCCCc-eEEEECCHHHHHHHHhhhccccc------------------CCCcHHHHH
Confidence 2111 1122479999999999998886 88887645443222111101100 01111 122
Q ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC-CCceEEEEEEcCCcchhhhhhhhccccchhHHHHHH
Q 046506 170 KLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP-RHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINE 248 (310)
Q Consensus 170 ~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (310)
++.++++....++++++.++..++++++.+.|+++ ++++..+ ...+++++.+..... +
T Consensus 266 a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~--------------~------ 324 (407)
T 2dkj_A 266 GKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR-GYRIVTGGTDNHLFLVDLRPKGL--------------T------ 324 (407)
T ss_dssp HHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGTC--------------C------
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-CceeecCCCCceEEEEECcccCC--------------C------
Confidence 44456655444678899999999999999999988 8888754 456777777653100 0
Q ss_pred HHHHHHHHHHhcCcEEEEEeEE-------CCEeEEEEEccCC---CCCHHHHHHHHHHHHHHHHH
Q 046506 249 FNRELLESINASGKAYMTHAVL-------GGIYAIRFAAGAT---LTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 249 ~~~~l~~~l~~~g~~~~~~~~~-------~~~~~iRis~~~~---~~t~edi~~li~~l~~~~~~ 303 (310)
..++.+.|.+.|. .+.+... ...+.+|+|++.+ ..+++|+++++++|++++.+
T Consensus 325 -~~~~~~~l~~~gi-~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 325 -GKEAEERLDAVGI-TVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp -HHHHHHHHHHTTE-ECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHcCc-eecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 1356667767764 4433211 1246799996532 27899999999999988866
No 61
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.80 E-value=4.4e-18 Score=158.35 Aligned_cols=259 Identities=12% Similarity=0.036 Sum_probs=162.4
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCCh---HHHHHHHHHhCcEEEeec
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTL---KPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl---~~I~~l~~~~g~~l~vD~ 81 (310)
..|.. ++.+|.++++.+.+|+++|+++|++....+..+.+|+++.++|++|.+.|. ++|+++|++||+++++|+
T Consensus 155 ~~g~~---~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De 231 (435)
T 3piu_A 155 RTGVE---IVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDE 231 (435)
T ss_dssp TTCCE---EEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred hcCCE---EEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 35665 899999875556799999999998865544456788888899999998664 788899999999999999
Q ss_pred ccccccccChhh---hhhhcCC--------CCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCcccccccccc
Q 046506 82 AYAGSACICPEF---RHFIDGV--------EGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATES 149 (310)
Q Consensus 82 a~~~~~~~~~~~---~~~~~~~--------~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~ 149 (310)
+|+.+.+..... ....... ....++..++||+++.| ..+|+++..++... +.+.....+...
T Consensus 232 a~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~-~~~~~~~~~~~~----- 305 (435)
T 3piu_A 232 IYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVV-AAATKMSSFGLV----- 305 (435)
T ss_dssp TTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHH-HHHHHHGGGSCC-----
T ss_pred cccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHH-HHHHHHhhcCCC-----
Confidence 997654322111 1111110 01227789999999743 45788877555433 222111111100
Q ss_pred ccccCCCCceeccCCCcchHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcc
Q 046506 150 KQVVDYKDWQITLSRRFRSLKLWFVLRNYG--VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAV 227 (310)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~ 227 (310)
+ +.....+.+.+.... .+.+++..++..++.+++.+.|.+. ++++..+....++.+.+.....
T Consensus 306 -------------~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~l~~~~~ 370 (435)
T 3piu_A 306 -------------S-SQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-GISCLNGNAGLFCWVDMRHLLR 370 (435)
T ss_dssp -------------C-HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEECCCCSSSEEEEECGGGSS
T ss_pred -------------C-HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCCeeEEEEEEcccccc
Confidence 0 011122222222111 2345677788889999999999987 8887754444566666654100
Q ss_pred hhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeE-E--CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 228 MDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAV-L--GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~--~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
... .....++.+.+.++..+.+.+.. . .+.+++|+++.. .++++++.+++.|+++++++
T Consensus 371 ------------~~~----~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~--~~~e~i~~~l~~l~~~l~~~ 432 (435)
T 3piu_A 371 ------------SNT----FEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFAN--LPERTLDLAMQRLKAFVGEY 432 (435)
T ss_dssp ------------SSS----HHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSS--SCHHHHHHHHHHHHHHHHHH
T ss_pred ------------cCC----chhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeC--CCHHHHHHHHHHHHHHHHHH
Confidence 000 01124566777666334554422 1 346799999653 38999999999999988765
Q ss_pred h
Q 046506 305 L 305 (310)
Q Consensus 305 ~ 305 (310)
.
T Consensus 433 ~ 433 (435)
T 3piu_A 433 Y 433 (435)
T ss_dssp C
T ss_pred h
Confidence 3
No 62
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.79 E-value=6.4e-18 Score=156.82 Aligned_cols=253 Identities=11% Similarity=0.069 Sum_probs=160.0
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEeec
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD~ 81 (310)
..|+. ++.+|.++++.+.+|+++|+++|++....+..+.+|+++.++|++|.+.| +++|+++|++||+++++|+
T Consensus 152 ~~g~~---~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De 228 (428)
T 1iay_A 152 RTGVQ---LIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDE 228 (428)
T ss_dssp TTCCE---EEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEEC
T ss_pred hcCCE---EEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEec
Confidence 45665 88999876434679999999999875433334667888888999999999 9999999999999999999
Q ss_pred ccccccccCh---hhhhhhcC----CCCCC--eeeeecccccccc-cceEEEEEeCchhHHhhhccCCcccccccccccc
Q 046506 82 AYAGSACICP---EFRHFIDG----VEGAD--SFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQ 151 (310)
Q Consensus 82 a~~~~~~~~~---~~~~~~~~----~~~~D--~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~ 151 (310)
+|+.+.+... ........ .-..| ++..++||+++.| ..+|++++.++..+....... .+.
T Consensus 229 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~-~~~--------- 298 (428)
T 1iay_A 229 IYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMS-SFG--------- 298 (428)
T ss_dssp TTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHH-TTS---------
T ss_pred cccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHHH-hcc---------
Confidence 9987543211 11111110 00157 7789999998744 236888775554432221110 000
Q ss_pred ccCCCCceeccCCCcchHHHHHHHHHhCH-----HHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCc
Q 046506 152 VVDYKDWQITLSRRFRSLKLWFVLRNYGV-----ANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSA 226 (310)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~ 226 (310)
. ...+...++...+.. +.+++..++..++.+++.+.|+++ ++++..+...+++.+.+....
T Consensus 299 ---------~----~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~ 364 (428)
T 1iay_A 299 ---------L----VSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIKCLKNNAGLFCWMDLRPLL 364 (428)
T ss_dssp ---------C----CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBCCCSSSSEEEEECGGGC
T ss_pred ---------c----CCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCCeeEEEEEechhhc
Confidence 0 012222233333322 245777888889999999999887 777654335556666664310
Q ss_pred chhhhhhhhccccchhHHHHHHHHHHHHHHHHhc-CcEEEEEeE-EC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 227 VMDKLKTKYENSLLSEEERINEFNRELLESINAS-GKAYMTHAV-LG--GIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~-~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
. ... .....++.+.|.++ |. .+.+.. .. +.+++|+++. .+++++++.++++|+++++
T Consensus 365 ~------------~~~----~~~~~~l~~~l~~~~gi-~v~~~~~~~~~~~~~iRis~~--~~~~e~i~~~~~~l~~~l~ 425 (428)
T 1iay_A 365 R------------EST----FDSEMSLWRVIINDVKL-NVSPGSSFECQEPGWFRVCFA--NMDDGTVDIALARIRRFVG 425 (428)
T ss_dssp S------------SSS----HHHHHHHHHHHHHTSCE-ECEEGGGGTCSSSSEEEEECS--SSCHHHHHHHHHHHHHHHH
T ss_pred C------------CCc----hhHHHHHHHHHHHhCCE-EEeCchhhCCCCCCEEEEEEe--cCCHHHHHHHHHHHHHHHh
Confidence 0 000 01124577777776 64 444322 11 2468999965 3789999999999998765
Q ss_pred H
Q 046506 303 A 303 (310)
Q Consensus 303 ~ 303 (310)
+
T Consensus 426 ~ 426 (428)
T 1iay_A 426 V 426 (428)
T ss_dssp T
T ss_pred c
Confidence 3
No 63
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.79 E-value=6.2e-18 Score=154.76 Aligned_cols=254 Identities=13% Similarity=0.128 Sum_probs=157.7
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
...|.. ++++|++++ ++.+|+++|+++|++. +.+|+ .++++|.+.|+++|+++|++||+++|+|++|
T Consensus 96 ~~~g~~---~~~v~~~~~-~~~~d~~~l~~~i~~~------~~~v~---~~n~tG~~~~l~~i~~la~~~~~~li~D~a~ 162 (388)
T 1b9h_A 96 QRLGAV---TVPVDVDAA-TYNLDPEAVAAAVTPR------TKVIM---PVHMAGLMADMDALAKISADTGVPLLQDAAH 162 (388)
T ss_dssp HHTTCE---EEEECBCTT-TCCBCHHHHHHHCCTT------EEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCEECTT
T ss_pred HHcCCE---EEEEecCCC-cCCCCHHHHHHhcCcC------ceEEE---EeCCccCcCCHHHHHHHHHHcCCEEEEecch
Confidence 445776 899999874 4689999999999643 33444 6778999999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchh--HHhhhccCCccccccccccccccCCCCceec
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSD--LVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~--~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
+.+....... ...+..+++++++.||+++++. .|+++.+++.. +....... .+-... ....+......
T Consensus 163 ~~g~~~~~~~---~~~~~~i~~~S~s~~K~l~g~~-~G~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~g 232 (388)
T 1b9h_A 163 AHGARWQGKR---VGELDSIATFSFQNGKLMTAGE-GGAVVFPDGETEKYETAFLRH-SCGRPR-----DDRRYFHKIAG 232 (388)
T ss_dssp CTTCEETTEE---GGGSSSCEEEECCTTSSSCSSS-CEEEEECTTCHHHHHHHHHHT-BTTCCT-----TCSSCCCCSCC
T ss_pred hcCCccCCee---cccccceEEEEccCCCcccCCC-eEEEEECCHHHHHHHHHHHHH-hCCCCc-----cCccceeeccc
Confidence 8665432111 1112247788888999997764 56666665533 33321111 000000 00000000000
Q ss_pred cCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC-----C-CceEEEEEEcCCcchhhhhhhh
Q 046506 162 LSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP-----R-HFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 162 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-----~-~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
.+.+...+.+++... ..+.+++..++..++++++.+.|+++|++++..+ + ..+++++.+.+..
T Consensus 233 ~~~~~~~~~~a~~~~--~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 301 (388)
T 1b9h_A 233 SNMRLNEFSASVLRA--QLARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLT--------- 301 (388)
T ss_dssp CBCBCBHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCC---------
T ss_pred ccCCcCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcC---------
Confidence 111123333333222 2345677788888899999999999889988752 2 2467777775421
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEEC-----------------------------CEeEEEEEccCCCC-
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKAYMTHAVLG-----------------------------GIYAIRFAAGATLT- 285 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-----------------------------~~~~iRis~~~~~~- 285 (310)
.....++.+.|.++|.......... ....||+++. +.+
T Consensus 302 -----------~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~-~~~~ 369 (388)
T 1b9h_A 302 -----------EERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHR-VLLA 369 (388)
T ss_dssp -----------HHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGG-GGGS
T ss_pred -----------cccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCC-CCCC
Confidence 0112467777777775433221100 0247999966 567
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 046506 286 EERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 286 t~edi~~li~~l~~~~~~ 303 (310)
|++||++++++|+++.++
T Consensus 370 t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 370 GEPELHATAEIIADAVAR 387 (388)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhh
Confidence 999999999999987653
No 64
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.79 E-value=5.5e-19 Score=161.73 Aligned_cols=247 Identities=12% Similarity=0.099 Sum_probs=154.8
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|.. ++.+|.++.+++.+|+++|+++|++. +.+|++++++|++|.+.| +++|+++|++||+++++
T Consensus 131 ~~~~g~~---~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 201 (388)
T 1j32_A 131 VKLAEGT---PVILPTTVETQFKVSPEQIRQAITPK------TKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLS 201 (388)
T ss_dssp HHHTTCE---EEEECCCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHcCCE---EEEecCCcccCCCCCHHHHHHhcCcC------ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 3455666 88999875334679999999999653 457888889999999865 99999999999999999
Q ss_pred ecccccccccChh---hhhhhcCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccC
Q 046506 80 DAAYAGSACICPE---FRHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVD 154 (310)
Q Consensus 80 D~a~~~~~~~~~~---~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 154 (310)
|++|+.+...... .........+.|++..|+||+++.| | +|+++++++ ......... ... .
T Consensus 202 De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~-G~r~G~~~~~~~-~~~~l~~~~-~~~--~--------- 267 (388)
T 1j32_A 202 DEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMT-GWRVGFLAGPVP-LVKAATKIQ-GHS--T--------- 267 (388)
T ss_dssp ECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCT-TTCCEEEECCHH-HHHHHHHHH-HTT--T---------
T ss_pred EccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCc-ccceEEEEeCHH-HHHHHHHHH-hhc--c---------
Confidence 9999765432211 0100000013788999999998634 5 788876543 332221100 000 0
Q ss_pred CCCceeccCCC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhh
Q 046506 155 YKDWQITLSRR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKT 233 (310)
Q Consensus 155 ~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~ 233 (310)
.+.+ .....+.++++ .+.+.++++.++..++.+++.+.|+++|++++..+.....+.+.+....
T Consensus 268 -------~~~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~------- 332 (388)
T 1j32_A 268 -------SNVCTFAQYGAIAAYE-NSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTG------- 332 (388)
T ss_dssp -------CSCCHHHHHHHHHHHH-SCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCCCBTTEECCBCGGGT-------
T ss_pred -------cCCCHHHHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCeeEEEEEecCCCC-------
Confidence 0000 11122223333 2356678889999999999999999988888764332222323232100
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHh-cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 234 KYENSLLSEEERINEFNRELLESINA-SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.+ ..++.+.|.+ .|.....+......+++|+|+. +++++++.+++.|+++++++
T Consensus 333 -------~~-------~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~---~~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 333 -------RS-------SLDFCSELLDQHQVATVPGAAFGADDCIRLSYA---TDLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp -------CC-------HHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC---SCHHHHHHHHHHHHHHHHHH
T ss_pred -------CC-------HHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec---CCHHHHHHHHHHHHHHHHHh
Confidence 00 1356666765 5643333222222468999954 68999999999999887654
No 65
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.79 E-value=6.8e-18 Score=156.20 Aligned_cols=243 Identities=11% Similarity=0.150 Sum_probs=150.3
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
..|+. +++++.+ +++|+++|++. +.+|++++++|++|.+.|+++|+++|++||+++++|++|+
T Consensus 118 ~~g~~---~~~~~~~--------~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~ 180 (412)
T 2cb1_A 118 LMGVT---VRYVDPE--------PEAVREALSAK------TRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFG 180 (412)
T ss_dssp TTTCE---EEEECSS--------HHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGG
T ss_pred HcCCE---EEEECCC--------HHHHHHHhccC------CeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCc
Confidence 34554 6666653 78999998653 4588889999999999999999999999999999999998
Q ss_pred cccccChhhhhhhcCCCCCCeeeeecccccccccc-eEEEEEeCchh-HHhhhccCCccccccc--ccc--cccc-CCCC
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD-CCCLWVKDPSD-LVNSLSTNPEYLKNKA--TES--KQVV-DYKD 157 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-~g~l~v~~~~~-~~~~~~~~~~y~~~~~--~~~--~~~~-~~~~ 157 (310)
.+....... . .++|+++.|+||++++|.+ .|++++.++.. ..+.....++...... ... .... ..+.
T Consensus 181 ~~~~~~~~~-----~-~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~ 254 (412)
T 2cb1_A 181 AAGALCRPL-----A-WGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRT 254 (412)
T ss_dssp TTTTSCCGG-----G-GTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHH
T ss_pred cccccCCcc-----c-cCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHH
Confidence 763222111 1 1589999999999999877 78877776421 1000001111110000 000 0000 0000
Q ss_pred ce-eccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEec-C----------------CCceEEE
Q 046506 158 WQ-ITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVF-P----------------RHFAVVC 219 (310)
Q Consensus 158 ~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~-~----------------~~~~~v~ 219 (310)
.. ...+........+..+. +.+.+..+.++..++++++.+.|.+.+++.++. + ...++++
T Consensus 255 ~~~~~~g~~~~~~~a~~~~~--~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~ 332 (412)
T 2cb1_A 255 LGLSLCGMALSPFNAYLLFQ--GLETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILT 332 (412)
T ss_dssp HHTTTTCCCCCHHHHHHHHH--HGGGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEE
T ss_pred HHHHhcCCCCChHHhHHHHc--CCchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEE
Confidence 00 00111223344444433 334566777888899999999999989987552 2 1356889
Q ss_pred EEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEe--------EE----------------CC--E
Q 046506 220 FRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHA--------VL----------------GG--I 273 (310)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--------~~----------------~~--~ 273 (310)
|.+ +.. +.+...+.+.|.+. .+. .. .+ .
T Consensus 333 ~~~-~~~------------------------~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~ 386 (412)
T 2cb1_A 333 LDL-GDL------------------------ERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTP 386 (412)
T ss_dssp EEC-SSH------------------------HHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCT
T ss_pred EEe-CCH------------------------HHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCC
Confidence 988 521 23344444455433 221 00 01 4
Q ss_pred eEEEEEccCCCCCHHHHHHHHHHHHH
Q 046506 274 YAIRFAAGATLTEERHVMVAWTVVQE 299 (310)
Q Consensus 274 ~~iRis~~~~~~t~edi~~li~~l~~ 299 (310)
+.||+|+. .++++++|+.++++|++
T Consensus 387 ~~iR~s~g-~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 387 GLVRVSVG-LEDPLDLLALFEEALEA 411 (412)
T ss_dssp TEEEEECC-SSCHHHHHHHHHHHHHC
T ss_pred CeEEEEec-cCCHHHHHHHHHHHHhh
Confidence 79999966 68999999999999874
No 66
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.79 E-value=7.9e-19 Score=163.03 Aligned_cols=247 Identities=12% Similarity=0.122 Sum_probs=157.5
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhC----------c
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFG----------I 75 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g----------~ 75 (310)
.|.. ++.+|.++. ++.+|+++|+++|++. +.+|++++++|++|.+.|+++|.++|+++| +
T Consensus 147 ~g~~---v~~v~~~~~-~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~ 216 (432)
T 3a9z_A 147 QVAE---VTFVPVSKV-NGQVEVEDILAAVRPT------TCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRV 216 (432)
T ss_dssp TSCE---EEEECCCTT-TSSCCHHHHHHTCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred cCcE---EEEEecCcc-cCCcCHHHHHHhccCC------ceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCce
Confidence 4565 899998862 3489999999998653 568889999999999999999999999999 9
Q ss_pred EEEeecccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCC
Q 046506 76 WVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDY 155 (310)
Q Consensus 76 ~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 155 (310)
++|+|++|+.+..+.+... .++|++++|+||+++ |. +|+++++++... . ...+.+......
T Consensus 217 ~livDea~~~~~~~~~~~~------~~~d~~~~s~~K~~g-~~-~G~~~~~~~~~~-~--~~~~~~~~~~~~-------- 277 (432)
T 3a9z_A 217 LVHTDAAQALGKRRVDVED------LGVDFLTIVGHKFYG-PR-IGALYVRGVGKL-T--PLYPMLFGGGQE-------- 277 (432)
T ss_dssp EEEEECTTTTTTSCCCHHH------HCCSEEEEEGGGTTC-CS-CEEEEETTBTTT-B--CCCCSCCSSCGG--------
T ss_pred EEEEEchhhhCCcccChhh------cCCCEEEEehhHhcC-Cc-ceEEEEcccccc-C--CcCceeecCCcc--------
Confidence 9999999987654332111 148999999999875 76 999988765311 1 111222111100
Q ss_pred CCceeccC-CCc-chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEe--cC----CC-ceEEEEEEcCCc
Q 046506 156 KDWQITLS-RRF-RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVV--FP----RH-FAVVCFRVSPSA 226 (310)
Q Consensus 156 ~~~~~~~~-~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~--~~----~~-~~~v~~~~~~~~ 226 (310)
..++.+ ... ...++.++++.+ .++++++.++..++++++.+.|++++++++. .+ .. .++++|.+....
T Consensus 278 --~~~~~~~~~~~~~~a~~aal~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (432)
T 3a9z_A 278 --RNFRPGTENTPMIAGLGKAADLV-SENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQ 354 (432)
T ss_dssp --GGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTT
T ss_pred --ccccCCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCC
Confidence 001111 111 223344455544 3478889999999999999999886565432 32 12 347778776521
Q ss_pred chhhhhhhhccccchhHHHHHHHHHHHHHHHH----hcCcEEEEE------------eEE--CCEeEEEEEccCCCCCHH
Q 046506 227 VMDKLKTKYENSLLSEEERINEFNRELLESIN----ASGKAYMTH------------AVL--GGIYAIRFAAGATLTEER 288 (310)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~----~~g~~~~~~------------~~~--~~~~~iRis~~~~~~t~e 288 (310)
. +. .++.+.+. +.|..+... ... ...+++|+|+. .++|++
T Consensus 355 ~--------------~~-------~~~~~~l~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~-~~~t~e 412 (432)
T 3a9z_A 355 L--------------RG-------YMVLAQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVG-RSTTRA 412 (432)
T ss_dssp C--------------CH-------HHHHHHCSSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECC-TTCCHH
T ss_pred C--------------cH-------HHHHHHhcCeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEcC-CCCCHH
Confidence 0 00 12222221 111111000 000 01268999966 678999
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 046506 289 HVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 289 di~~li~~l~~~~~~~~~ 306 (310)
|+++++++|+++++++++
T Consensus 413 ei~~~~~~l~~~~~~~~~ 430 (432)
T 3a9z_A 413 EVDLIVQDLKQAVNQLEG 430 (432)
T ss_dssp HHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 999999999999887654
No 67
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.79 E-value=3.5e-18 Score=157.13 Aligned_cols=240 Identities=13% Similarity=0.083 Sum_probs=156.9
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
..|.. ++.+|.+ |+++|+++++.... ..+.+|++++.+|++|.+.|+++|+++|++||+++++|++|+
T Consensus 151 ~~g~~---~~~v~~~-------d~~~le~~l~~~~~--~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~ 218 (401)
T 2bwn_A 151 RNAGP---KRIFRHN-------DVAHLRELIAADDP--AAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHA 218 (401)
T ss_dssp HSCCC---EEEECTT-------CHHHHHHHHHHSCT--TSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTT
T ss_pred HcCCe---EEEEcCC-------CHHHHHHHHHhhcc--CCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEecccc
Confidence 34555 7778763 68999999975311 125689999999999999999999999999999999999998
Q ss_pred cccccChhhhhh--hcCC-CCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceec
Q 046506 85 GSACICPEFRHF--IDGV-EGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 85 ~~~~~~~~~~~~--~~~~-~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
.+.+. +...+. ..++ ...|.+..+++|+++.|. |++.. ++............+.. .
T Consensus 219 ~g~~~-~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G--G~~~~-~~~~~~~l~~~~~~~~~-----------------~ 277 (401)
T 2bwn_A 219 VGMYG-PRGAGVAERDGLMHRIDIFNGTLAKAYGVFG--GYIAA-SARMVDAVRSYAPGFIF-----------------S 277 (401)
T ss_dssp TTTSS-TTSCCHHHHHTCGGGCSEEEEESSSTTCSCC--EEEEE-CHHHHHHHHHHCHHHHT-----------------S
T ss_pred ccccC-CCCceeeeccCccccCcEEEeechhhccCCC--CEEec-CHHHHHHHHHhCcCcee-----------------c
Confidence 55321 110000 1111 236888899999998653 65554 44333221111111111 1
Q ss_pred cCCC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccc
Q 046506 162 LSRR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLL 240 (310)
Q Consensus 162 ~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
.+.+ ....++.++++.+...+++++.++..++++++.+.|+++ ++++.. +..+++++.+..
T Consensus 278 ~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~---------------- 339 (401)
T 2bwn_A 278 TSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMPIID-HGSHIVPVVIGD---------------- 339 (401)
T ss_dssp BCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCC-CSSSCEEEECCC----------------
T ss_pred CCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCcccC-CCCCeEEEEeCC----------------
Confidence 1111 233445667766655677889999999999999999887 787763 455677776643
Q ss_pred hhHHHHHHHHHHHHHHHH-hcCcEEEEEeEE----CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 241 SEEERINEFNRELLESIN-ASGKAYMTHAVL----GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 241 ~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~----~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
.....++.+.|. +.|. .+.+... .+..++|+|++ .+++++|+++++++|+++++.
T Consensus 340 ------~~~~~~~~~~L~~~~gi-~v~~~~~~~~~~~~~~iRis~~-~~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 340 ------PVHTKAVSDMLLSDYGV-YVQPINFPTVPRGTERLRFTPS-PVHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp ------HHHHHHHHHHHHHHHCE-ECCEECTTTSCTTCCEEEECCC-TTSCHHHHHHHHHHHHHHC--
T ss_pred ------hHHHHHHHHHHHhcCCE-EEeecCCCCCCCCCceEEEEee-CCCCHHHHHHHHHHHHHHHHh
Confidence 111245677775 5664 4433221 13468999966 578999999999999987654
No 68
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.79 E-value=5e-18 Score=155.93 Aligned_cols=240 Identities=13% Similarity=0.004 Sum_probs=155.4
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+..|.. ++.+|. +|+++|+++|++... ..+.+|++.+.+|++|.+.|+++|+++|++||+++++|++|
T Consensus 145 ~~~g~~---~~~v~~-------~d~~~l~~~l~~~~~--~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~ 212 (398)
T 3a2b_A 145 RLSFSK---VIKYGH-------NNMEDLRAKLSRLPE--DSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAH 212 (398)
T ss_dssp HHSSSE---EEEECT-------TCHHHHHHHHHTSCS--SSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTT
T ss_pred HHcCCc---eEEeCC-------CCHHHHHHHHHhhcc--CCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCC
Confidence 344554 666654 578999999976311 02568888888999999999999999999999999999999
Q ss_pred ccccccChhhhhh--hcCC-CCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 84 AGSACICPEFRHF--IDGV-EGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 84 ~~~~~~~~~~~~~--~~~~-~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
+.+.+.. ..... ..++ .++|+++.|+||+++ |.| |+++.+ +..+.........+....
T Consensus 213 ~~~~~~~-~~~~~~~~~~~~~~~di~~~s~sK~~~-~~G-G~~~~~-~~~~~~l~~~~~~~~~~~--------------- 273 (398)
T 3a2b_A 213 SLGVIGH-KGAGTASHFGLNDDVDLIMGTFSKSLA-SLG-GFVAGD-ADVIDFLKHNARSVMFSA--------------- 273 (398)
T ss_dssp TTTTSSG-GGCCHHHHHTCGGGCSEEEEESSSTTC-SSC-EEEEEC-HHHHHHHHHHCHHHHSSB---------------
T ss_pred cccccCC-CCCchHhhcCCCcCCeEEEeccccccc-CCC-cEEEeC-HHHHHHHHHhcccceecC---------------
Confidence 7654311 00110 0111 137999999999987 656 877764 444332211111111110
Q ss_pred ccCCCcch-HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhcccc
Q 046506 161 TLSRRFRS-LKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSL 239 (310)
Q Consensus 161 ~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 239 (310)
+..... +.+.++++.+ +.++++.++..++.+++.+.|+++ ++++. ++..+++.+.+..
T Consensus 274 --~~~~~~~a~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~~~~~~--------------- 332 (398)
T 3a2b_A 274 --SMTPASVASTLKALEII--QNEPEHIEKLWKNTDYAKAQLLDH-GFDLG-ATESPILPIFIRS--------------- 332 (398)
T ss_dssp --CCCHHHHHHHHHHHHHH--HHCTHHHHHHHHHHHHHHHHHHHT-TCCBC-SCCSSEEEEECCC---------------
T ss_pred --CCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHhc-CCCcC-CCCCCEEEEEcCC---------------
Confidence 001111 1233444432 335677888889999999999887 77765 3456666666542
Q ss_pred chhHHHHHHHHHHHHHHHHhcCcEEEEEeEE----CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 240 LSEEERINEFNRELLESINASGKAYMTHAVL----GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 240 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.....++.+.|.++|. .+.+... .+.+++|++++ ..++++++++++++|++++.++
T Consensus 333 -------~~~~~~l~~~l~~~gi-~v~~~~~~~~~~~~~~iRis~~-~~~~~e~i~~~~~~l~~~l~~~ 392 (398)
T 3a2b_A 333 -------NEKTFWVTKMLQDDGV-FVNPVVSPAVPAEESLIRFSLM-ATHTYDQIDEAIEKMVKVFKQA 392 (398)
T ss_dssp -------HHHHHHHHHHHHHTTE-ECEEECTTTSCGGGCEEEEECC-TTCCHHHHHHHHHHHHHHHHHC
T ss_pred -------HHHHHHHHHHHHHCCc-EEEeeCCCCCCCCCceEEEEEe-CCCCHHHHHHHHHHHHHHHHHh
Confidence 1112467778888864 4443321 13578999966 4689999999999999988765
No 69
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.79 E-value=4.6e-18 Score=156.26 Aligned_cols=238 Identities=11% Similarity=0.062 Sum_probs=154.2
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChh
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPE 92 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~ 92 (310)
++.++.++. .+.+|+++|+++|++.. +.++++ . .+..|...|+++|+++|++||+++++|++|+.+....+.
T Consensus 138 ~~~~~~~~~-~~~~d~~~l~~~i~~~~-----~~~v~~-~-~~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~ 209 (405)
T 2vi8_A 138 FVAYGVDPE-THVIDYDDVREKARLHR-----PKLIVA-A-AAAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGL 209 (405)
T ss_dssp EEEECBCTT-TCSBCHHHHHHHHHHHC-----CSEEEE-C-CSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTS
T ss_pred EEecccccc-cCCcCHHHHHHHHHhcC-----CeEEEE-e-CCCCCccCCHHHHHHHHHHcCCEEEEEccccccccccCc
Confidence 666666543 46899999999997631 334544 2 234577779999999999999999999999855443221
Q ss_pred hhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCc-chHHH
Q 046506 93 FRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRF-RSLKL 171 (310)
Q Consensus 93 ~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 171 (310)
.. ..+..+|+++.|+||++++|.| |+++++ +............+.. ++... ...++
T Consensus 210 ~~---~~~~~~di~~~s~sK~~~g~~g-G~~~~~-~~~~~~l~~~~~~~~~------------------~~~~~~~~aa~ 266 (405)
T 2vi8_A 210 HP---NPVPYAHFVTTTTHKTLRGPRG-GMILCQ-EQFAKQIDKAIFPGIQ------------------GGPLMHVIAAK 266 (405)
T ss_dssp SC---CSTTTCSEEEEESSSTTCCCSC-EEEEEC-HHHHHHHHHHHTTTTC------------------SSCCHHHHHHH
T ss_pred CC---CccccCCEEEEeccccCCCCCC-eEEEEc-HHHHHHHHhhhccccc------------------CCCCHHHHHHH
Confidence 11 1123589999999999998888 888776 4333222111001110 11111 22333
Q ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC-CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHH
Q 046506 172 WFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR-HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFN 250 (310)
Q Consensus 172 ~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (310)
.++++.+...+++++.++..++++++.+.|+++ ++++..++ ..+++.+.+..... + .
T Consensus 267 ~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~--------------~-------~ 324 (405)
T 2vi8_A 267 AVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFTLVSGGTDNHLLLVDLRPQQL--------------T-------G 324 (405)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGTC--------------C-------H
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCCceEEEEEccCCCC--------------C-------H
Confidence 455555444678899999999999999999988 89887543 46677776653110 0 1
Q ss_pred HHHHHHHHhcCcEEEEEeE-------ECCEeEEEEEccCC---CCCHHHHHHHHHHHHHHHHHH
Q 046506 251 RELLESINASGKAYMTHAV-------LGGIYAIRFAAGAT---LTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 251 ~~l~~~l~~~g~~~~~~~~-------~~~~~~iRis~~~~---~~t~edi~~li~~l~~~~~~~ 304 (310)
.++.+.|.+.|.. +.+.. ....+.+|+|++.+ ..+++|+++++++|++++..+
T Consensus 325 ~~~~~~l~~~gi~-v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~ 387 (405)
T 2vi8_A 325 KTAEKVLDEVGIT-VNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNV 387 (405)
T ss_dssp HHHHHHHHHHTEE-CEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHcCce-eccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhcc
Confidence 3566667666744 33321 11245799996631 367999999999999887554
No 70
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.78 E-value=1.5e-17 Score=153.45 Aligned_cols=224 Identities=10% Similarity=0.041 Sum_probs=148.0
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChh--hhhhhcCCCCC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPE--FRHFIDGVEGA 103 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~--~~~~~~~~~~~ 103 (310)
+|+++|+++|++.. +.+|++...+|++|.+.|+++|+++|++||+++++|++|+.+.+.... ..........+
T Consensus 173 ~d~~~le~~l~~~~-----~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~ 247 (409)
T 3kki_A 173 NNCDHLRMLIQRHG-----PGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREV 247 (409)
T ss_dssp TCHHHHHHHHHHHC-----SCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGC
T ss_pred CCHHHHHHHHHhcC-----CeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCC
Confidence 68999999998642 358888899999999999999999999999999999999765432110 00001111247
Q ss_pred CeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC-cchHHHHHHHHHhCHHH
Q 046506 104 DSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 104 D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~ 182 (310)
|+++.+++|+++.+ .|+++.+ +............+... .+.. ..+.++.++++.+ +.
T Consensus 248 di~~~s~sK~~~~~--gg~v~~~-~~~~~~~~~~~~~~~~~-----------------~~~~~~~~aa~~aal~~~--~~ 305 (409)
T 3kki_A 248 HFMTASLAKTFAYR--AGAIWCN-NEVNRCVPFISYPAIFS-----------------STLLPYEAAGLETTLEII--ES 305 (409)
T ss_dssp SEEEEESSSTTCSS--CEEEEES-SSGGGTHHHHCHHHHHS-----------------BCCCHHHHHHHHHHHHHH--HH
T ss_pred CEEEeecchhhCCC--ceEEEEC-HHHHHHHHHhCcCcccc-----------------CCCcHHHHHHHHHHHHHH--hc
Confidence 99999999999866 3555544 43332211111111111 1111 1222333444433 22
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCc
Q 046506 183 LRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGK 262 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 262 (310)
.+++.++..++.+++.+.|.++ ++++. +..+++.+.+... ....++.+.|.++|.
T Consensus 306 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~~----------------------~~~~~~~~~L~~~Gv 360 (409)
T 3kki_A 306 ADNRRQHLDRMARKLRIGLSQL-GLTIR--SESQIIGLETGDE----------------------RNTEKVRDYLESNGV 360 (409)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTT-TCCCC--CSSSEEEEEEESH----------------------HHHHHHHHHHHHTTE
T ss_pred CHHHHHHHHHHHHHHHHHHHHc-CCccC--CCCCEEEEEeCCH----------------------HHHHHHHHHHHHCCc
Confidence 3677888889999999999987 77665 3566777777542 122457777888875
Q ss_pred EEEEEe----EECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 263 AYMTHA----VLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 263 ~~~~~~----~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+ +.+. ...+..++|++++ ..++++|+++++++|+++++.
T Consensus 361 ~-v~~~~~~~~~~~~~~iRi~~~-~~~t~e~i~~~~~~l~~~l~~ 403 (409)
T 3kki_A 361 F-GSVFCRPATSKNKNIIRLSLN-SDVNDEQIAKIIEVCSDAVNY 403 (409)
T ss_dssp E-CEEECTTSSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred e-EeeeCCCCcCCCCcEEEEEcc-CCCCHHHHHHHHHHHHHHHhc
Confidence 4 4332 1235689999966 578999999999999998765
No 71
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.78 E-value=7.4e-18 Score=152.49 Aligned_cols=235 Identities=10% Similarity=0.015 Sum_probs=156.8
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD 80 (310)
+..|.. ++.+|.++++ .+++++|++++++ + .++++++++|++|.+.| +++|+++|++||+++++|
T Consensus 116 ~~~g~~---~~~~~~~~~~--~~~~~~l~~~l~~-~------~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 183 (361)
T 3ftb_A 116 KKHGVS---VVFSYLDENM--CIDYEDIISKIDD-V------DSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIID 183 (361)
T ss_dssp HHTTCE---EEEEECCTTS--CCCHHHHHHHTTT-C------SEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHcCCe---EEEeecCccc--CCCHHHHHHhccC-C------CEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEE
Confidence 445666 8999998754 6888999999875 3 37788899999999886 667888888999999999
Q ss_pred cccccccccChhhhhh-hcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCc
Q 046506 81 AAYAGSACICPEFRHF-IDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDW 158 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~-~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 158 (310)
++|+.+... ...... ........++..|++|+++.| ...|++++.++............+
T Consensus 184 e~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~~----------------- 245 (361)
T 3ftb_A 184 EAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPW----------------- 245 (361)
T ss_dssp CSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCTT-----------------
T ss_pred CcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCCC-----------------
Confidence 999765542 111000 011112346678999999743 456777656665543322111110
Q ss_pred eeccCCCcchHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHcCCCCeE-EecCCCceEEEEEEcCCcchhhhhhhhc
Q 046506 159 QITLSRRFRSLKLWFVLRNY-GVANLRHFLRSHVNMAKLFERLVGSDKRFE-VVFPRHFAVVCFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~-v~~~~~~~~v~~~~~~~~~~~~~~~~~~ 236 (310)
....+..+++...+ ..++++++.++..++.+++.+.|+++|++. +. ++..+++.+.+...+
T Consensus 246 ------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~---------- 308 (361)
T 3ftb_A 246 ------NINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVF-SPHANFVLCRLENIS---------- 308 (361)
T ss_dssp ------CSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEE-CCSSSEEEEEESSSC----------
T ss_pred ------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCceec-CCCCeEEEEEcCCCC----------
Confidence 01223333333333 245678889999999999999999999998 65 556677777775421
Q ss_pred cccchhHHHHHHHHHHHHHHHHhcCcEEEEEe-EE--CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 237 NSLLSEEERINEFNRELLESINASGKAYMTHA-VL--GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~--~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
..++.+.|.++|. .+.+. .. .+.+++|+|+. ++++++.++++|+++.+.
T Consensus 309 -------------~~~l~~~l~~~gi-~v~~g~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~~~~ 360 (361)
T 3ftb_A 309 -------------GEKLYDSLLKEDI-VIRRCCNFIGLDDSFVRFAIK----DEKKNTKFLRALKGVENN 360 (361)
T ss_dssp -------------HHHHHHHHHTTTE-ECEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHHHHT
T ss_pred -------------HHHHHHHHHHCCe-EEeeCccCCCCCCCEEEEEcC----CHHHHHHHHHHHHHHHhc
Confidence 1457777877864 44432 22 23578999943 688999999999887653
No 72
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.78 E-value=4.9e-19 Score=162.85 Aligned_cols=247 Identities=9% Similarity=0.040 Sum_probs=157.9
Q ss_pred ceecCCCCCCEEEEecCC----CCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCc
Q 046506 3 AQIVGIDVKNFRAIKTTK----SSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGI 75 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~----~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~ 75 (310)
++..|.. ++.+|.+. +..+.+|+++|+++|++. +.+|++++++|++|.+.| +++|+++|++||+
T Consensus 143 ~~~~g~~---~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~ 213 (407)
T 3nra_A 143 VEFFEGE---MVPVQLDYVSADETRAGLDLTGLEEAFKAG------ARVFLFSNPNNPAGVVYSAEEIGQIAALAARYGA 213 (407)
T ss_dssp HHHTTCE---EEEEEBCCCSSCCSSCCBCHHHHHHHHHTT------CCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTC
T ss_pred HHHcCCE---EEEeecccccccCcCCCcCHHHHHHHHhhC------CcEEEEcCCCCCCCcccCHHHHHHHHHHHHHcCC
Confidence 3455665 88999842 124689999999999763 447888889999999999 9999999999999
Q ss_pred EEEeecccccccccChhhhhhh--c-CCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCcccccccccccc
Q 046506 76 WVHVDAAYAGSACICPEFRHFI--D-GVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQ 151 (310)
Q Consensus 76 ~l~vD~a~~~~~~~~~~~~~~~--~-~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~ 151 (310)
++++|++|+.+........... . .....++++.++||+++.| ..+|+++. ++..+.........+...
T Consensus 214 ~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~~~~------- 285 (407)
T 3nra_A 214 TVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFG-SRAIIARMEKLQAIVSLR------- 285 (407)
T ss_dssp EEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEE-CHHHHHHHHHHHHHHTSS-------
T ss_pred EEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEc-CHHHHHHHHHHHhhhccC-------
Confidence 9999999987554321111100 0 1123457889999999743 45677765 443332221110000000
Q ss_pred ccCCCCceeccCCCcchHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchh
Q 046506 152 VVDYKDWQITLSRRFRSLKLWFVLRNY--GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMD 229 (310)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~ 229 (310)
...+..+++...+ ..+.+++..++..++++++.+.|+++|++.+..+.....+.+.+.....
T Consensus 286 --------------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-- 349 (407)
T 3nra_A 286 --------------AAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKLAV-- 349 (407)
T ss_dssp --------------SCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCBSS--
T ss_pred --------------CChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCCCC--
Confidence 0111122222222 2356788888999999999999999889887644444555444443110
Q ss_pred hhhhhhccccchhHHHHHHHHHHHHHHHHhc-CcEEEEEeE-E--CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 230 KLKTKYENSLLSEEERINEFNRELLESINAS-GKAYMTHAV-L--GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~-~--~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
+ ..++.+.|.++ |. ++.+.. . .+.+++|+|++ +++++|+.++++|++++++++
T Consensus 350 ------------~-------~~~~~~~l~~~~gi-~v~~g~~~~~~~~~~iRis~~---~~~~~i~~~~~~l~~~~~~~~ 406 (407)
T 3nra_A 350 ------------A-------PAEFVKILRLQAGV-VVTPGTEFSPHTADSVRLNFS---QDHEAAVAAARRIVTLVERYR 406 (407)
T ss_dssp ------------C-------HHHHHHHHHHHHCE-ECEEGGGTCTTCTTBEEEECC---SCHHHHHHHHHHHHHHHHHHB
T ss_pred ------------C-------HHHHHHHHHHhCCE-EEeCchhhCCCCCCEEEEEeC---CCHHHHHHHHHHHHHHHHHhh
Confidence 0 13566666554 64 444322 1 24678999965 389999999999999887753
No 73
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.78 E-value=6.1e-18 Score=153.60 Aligned_cols=230 Identities=14% Similarity=0.092 Sum_probs=152.6
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHh--CcEEE
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQF--GIWVH 78 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~--g~~l~ 78 (310)
+..|.. ++.+|.++ ++.+|+++|+++|++.. +.+|++++.+|++|.+.| +++|+++|++| |++++
T Consensus 127 ~~~g~~---~~~v~~~~--~~~~d~~~l~~~l~~~~-----~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li 196 (367)
T 3euc_A 127 QFAGLE---FVGVPLRA--DFTLDRGAMLAAMAEHQ-----PAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVV 196 (367)
T ss_dssp HTTTCE---EEEEECCT--TSCCCHHHHHHHHHHHC-----CSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEE
T ss_pred HHcCCe---EEEecCCC--CCCCCHHHHHHHhhccC-----CCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEE
Confidence 445665 89999987 35899999999998731 347778899999999854 77888889999 99999
Q ss_pred eecccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCc
Q 046506 79 VDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDW 158 (310)
Q Consensus 79 vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 158 (310)
+|++|+.+.... ....... ...+++..|+||++....++|+++. ++............|.
T Consensus 197 ~De~~~~~~~~~--~~~~~~~-~~~~i~~~s~sK~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~---------------- 256 (367)
T 3euc_A 197 VDEAYQPFAQES--WMSRLTD-FGNLLVMRTVSKLGLAGIRLGYVAG-DPQWLEQLDKVRPPYN---------------- 256 (367)
T ss_dssp EECTTCCSSSCC--SGGGGGT-CTTEEEEEECCCTTSCSCCEEEEEE-CHHHHHHHGGGCCSSC----------------
T ss_pred EeCcchhhcccc--hHHHHhh-CCCEEEEecchhhcccccCceeeee-CHHHHHHHHHhCCCCC----------------
Confidence 999997543211 1111111 2355778899999433455677776 4444433211111100
Q ss_pred eeccCCCcchHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhcc
Q 046506 159 QITLSRRFRSLKLWFVLRNYG-VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYEN 237 (310)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 237 (310)
...+..+++...+. .++++++.++..++++++.+.|+++|++++. ++..+.+.+.+. .
T Consensus 257 -------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~-~------------ 315 (367)
T 3euc_A 257 -------VNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTVF-PSAANFLLARVP-D------------ 315 (367)
T ss_dssp -------CCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCEEC-CCSSSEEEEECS-C------------
T ss_pred -------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECC-C------------
Confidence 11222223333332 4567889999999999999999999999864 556666666554 1
Q ss_pred ccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE---CCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 238 SLLSEEERINEFNRELLESINASGKAYMTHAVL---GGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
..++.+.|.+.|. .+.+... ...+++|+|+. +++|+++++++|++++
T Consensus 316 ------------~~~l~~~l~~~gi-~v~~~~~~~~~~~~~iRis~~----~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 316 ------------AAQTFDRLLARKV-LIKNVSKMHPLLANCLRVTVS----TPEENAQFLEAFAASL 365 (367)
T ss_dssp ------------HHHHHHHHHTTTE-ECEECGGGCGGGTTEEEEECC----CHHHHHHHHHHHHHHT
T ss_pred ------------HHHHHHHHHHCCe-EEEECCccCCCCCCEEEEecC----CHHHHHHHHHHHHHHh
Confidence 1356677777765 4443221 13478999943 7999999999998864
No 74
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.78 E-value=1.9e-18 Score=160.20 Aligned_cols=247 Identities=13% Similarity=0.090 Sum_probs=158.1
Q ss_pred ecCCCCCCEEEEecC-CCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCccccc---CChHHHHHHHHHhCcEEEee
Q 046506 5 IVGIDVKNFRAIKTT-KSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAV---DTLKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~-~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~---~pl~~I~~l~~~~g~~l~vD 80 (310)
..|.. ++.+|.+ +++.+.+|+++|+++|++. .+.+|++..++|++|.+ +++++|+++|++||+++++|
T Consensus 162 ~~g~~---~~~~~~~~~~~~~~~d~~~le~~i~~~-----~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~D 233 (421)
T 3l8a_A 162 LNDHR---LVENSLQIINGRFEIDFEQLEKDIIDN-----NVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSD 233 (421)
T ss_dssp HTTEE---EEEEECEEETTEEECCHHHHHHHHHHT-----TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HCCCE---EEeccccccCCCeeeCHHHHHHHhhcc-----CCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 44555 8888886 4456789999999999742 15578888899999998 67999999999999999999
Q ss_pred cccccccccChhhhhhh---cCCCCCCeeeeecccccc-cccceEEEEEeCchhHHhhhccCC-ccccccccccccccCC
Q 046506 81 AAYAGSACICPEFRHFI---DGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSDLVNSLSTNP-EYLKNKATESKQVVDY 155 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~---~~~~~~D~~~~~~hK~l~-~p~g~g~l~v~~~~~~~~~~~~~~-~y~~~~~~~~~~~~~~ 155 (310)
++|+............. .+....+.+..+++|+++ ....+|+++++++... +.+.... .+..
T Consensus 234 e~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~-~~~~~~~~~~~~------------ 300 (421)
T 3l8a_A 234 EIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLR-RKFQYRQLANNQ------------ 300 (421)
T ss_dssp CTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHH-HHHHHHHHHTTC------------
T ss_pred ccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHH-HHHHHHHHhccc------------
Confidence 99976544321111100 011134577899999997 3456788887755443 2221100 0000
Q ss_pred CCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhh
Q 046506 156 KDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
.++-.+...++.++++. +.+++++..++..++.+++.+.|+++|++.+..+....++.+.+.....
T Consensus 301 -----~~~n~~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~~~-------- 366 (421)
T 3l8a_A 301 -----HEVPTVGMIATQAAFQY-GKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAYAI-------- 366 (421)
T ss_dssp -----SCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEECGGGTC--------
T ss_pred -----CCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEeccccCC--------
Confidence 00111222333444442 5667889999999999999999988789988754333333355543100
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeE-E--CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKAYMTHAV-L--GGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~--~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
+ ..++.+.|.++..+.+.+.. . .+.+++|+++. +++++|+.+++.|++.++
T Consensus 367 ------~-------~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~---~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 367 ------A-------QPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA---TPKNTVQEALSRIISVFG 420 (421)
T ss_dssp ------C-------TTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC---SCHHHHHHHHHHHHHHC-
T ss_pred ------C-------HHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec---CCHHHHHHHHHHHHHHHh
Confidence 0 13566777655334554421 1 23579999955 589999999999987653
No 75
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.78 E-value=2.2e-18 Score=158.29 Aligned_cols=251 Identities=9% Similarity=0.002 Sum_probs=158.6
Q ss_pred eecCCCCCCEEEEecC-CCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 4 QIVGIDVKNFRAIKTT-KSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~-~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
+..|.. ++.+|.+ +++.+.+|+++|+++|++. .+.+|++++++|++|.+.| +++|+++|++||+++++
T Consensus 131 ~~~g~~---~~~~~~~~~~g~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 202 (399)
T 1c7n_A 131 KNQERK---IIECELLEKDGYYTIDFQKLEKLSKDK-----NNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWS 202 (399)
T ss_dssp HTTTCE---EEECCCEEETTEEECCHHHHHHHHTCT-----TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEE
T ss_pred HHcCCE---EEecccccCCCCEEEcHHHHHHHhccC-----CCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEE
Confidence 345665 8888886 3334579999999999631 1557778888999999999 99999999999999999
Q ss_pred ecccccccccChhhhhhhcCC----CCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccC
Q 046506 80 DAAYAGSACICPEFRHFIDGV----EGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVD 154 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~----~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 154 (310)
|++|+.+......... ...+ ...+++..+++|+++.| ..+|++++++++.+.........+...
T Consensus 203 De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~---------- 271 (399)
T 1c7n_A 203 DEIHFDLIMPGYEHTV-FQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDATSGM---------- 271 (399)
T ss_dssp ECTTTTCBCTTCCCCC-GGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTCC----------
T ss_pred EccccccccCCCCccc-HHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHHHHHHHHhhcccC----------
Confidence 9999865432211111 1111 12457788999998744 247888876554433221111011000
Q ss_pred CCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcC-CCCeEEecCCCceEE-EEEEcCCcchhhhh
Q 046506 155 YKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGS-DKRFEVVFPRHFAVV-CFRVSPSAVMDKLK 232 (310)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~-~~~~~v~~~~~~~~v-~~~~~~~~~~~~~~ 232 (310)
+.-......+.++++. +.+.+++..++..++.+++.+.|++ +|++.+.. +..+++ .+.+.....
T Consensus 272 -------~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~~~----- 337 (399)
T 1c7n_A 272 -------PFTTLGYKACEICYKE-CGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPL-IEGTYLQWIDFRALKM----- 337 (399)
T ss_dssp -------CCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCC-CSBSSEEEEECGGGCC-----
T ss_pred -------CCCHHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEec-CCceEEEEEEcccCCC-----
Confidence 0000112223333332 3567888888999999999999988 78887763 444444 455542100
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 233 TKYENSLLSEEERINEFNRELLESIN-ASGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
+ ..++.+.|. +.|.....+.... +.+++|+|++. .+++++.+++.|++.+.++.+
T Consensus 338 ---------~-------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~---~~~~l~~~l~~l~~~l~~~~~ 395 (399)
T 1c7n_A 338 ---------D-------HKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA---PSSVIQESLERLNKALKDLKN 395 (399)
T ss_dssp ---------C-------HHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS---CHHHHHHHHHHHHHHHHHHC-
T ss_pred ---------C-------HHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEecc---CHHHHHHHHHHHHHHHHHHHh
Confidence 0 135677776 5665443322211 34689999663 378999999999999887654
No 76
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.78 E-value=9.4e-18 Score=152.11 Aligned_cols=233 Identities=12% Similarity=0.101 Sum_probs=154.8
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh--CcEEEee
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF--GIWVHVD 80 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~--g~~l~vD 80 (310)
++..|.. ++.+|.+++ +.+|+++|++++++. +.+|++++++|++|.+.|+++|.++|+.+ |+++++|
T Consensus 125 ~~~~g~~---~~~v~~~~~--~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~D 193 (363)
T 3ffh_A 125 ALIEGAE---VREIPLLQD--GEHDLEGMLNAIDEK------TTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLD 193 (363)
T ss_dssp HHHHTCE---EEEEECCTT--SCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEE
T ss_pred HHHcCCE---EEEecCCCC--CCcCHHHHHHhcccC------CCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEe
Confidence 3456776 999999863 589999999999654 55788889999999999999999999888 9999999
Q ss_pred cccccccccChh--hhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 81 AAYAGSACICPE--FRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 81 ~a~~~~~~~~~~--~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
++|+.+.. ... ...... ...-+++..+.+|+++.| ..+|++++ +++...........| .
T Consensus 194 e~~~~~~~-~~~~~~~~~~~-~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~----~----------- 255 (363)
T 3ffh_A 194 EAYIEYVT-PQPEKHEKLVR-TYKNLIITRTFSKIYGLASARVGYGIA-DKEIIRQLNIVRPPF----N----------- 255 (363)
T ss_dssp CTTGGGCS-SCCCCCGGGGG-TCTTEEEEEESSSTTCCSSCCCEEEEE-CHHHHHHHHHTCCSC----C-----------
T ss_pred CchHhhcC-ccccCHHHHhh-cCCCEEEEeechhhhcCchhceeeeec-CHHHHHHHHHhCCCC----C-----------
Confidence 99985543 110 000011 112346678999998633 33488877 444443322111110 0
Q ss_pred ceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhcc
Q 046506 158 WQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYEN 237 (310)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 237 (310)
.-......+.++++ ..+++++..++..++.+++.+.|++++++++. ++..+++.+.+...
T Consensus 256 -----~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~~~------------ 315 (363)
T 3ffh_A 256 -----TTSIGQKLAIEAIK--DQAFIGECRTSNANGIKQYEAFAKRFEKVKLY-PANGNFVLIDLGIE------------ 315 (363)
T ss_dssp -----CBHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEC-CCCSSEEEEECSSC------------
T ss_pred -----CCHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHHHhhCCCceEC-CCCCeEEEEECCCC------------
Confidence 00011222333333 23667888999999999999999987799876 55566676666431
Q ss_pred ccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 238 SLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
..++.+.|.++|.....+..+...+++|+|+. +++|+++++++|+++
T Consensus 316 ------------~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~----~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 316 ------------AGTIFSYLEKNGYITRSGAALGFPTAVRITIG----KEEDNSAVIALLEKL 362 (363)
T ss_dssp ------------HHHHHHHHHHTTEECEETTTTTCTTEEEEECC----CHHHHHHHHHHHHHH
T ss_pred ------------HHHHHHHHHHCCeEEEeCccCCCCCeEEEECC----CHHHHHHHHHHHHHh
Confidence 14567777777743333222223579999943 799999999999875
No 77
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.78 E-value=6.5e-18 Score=154.34 Aligned_cols=235 Identities=13% Similarity=0.033 Sum_probs=152.3
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
..|.. ++.+|. +|+++|+++|++... .+.++++.+.+|++|.+.|+++|+++|++||+++++|++|+
T Consensus 142 ~~g~~---~~~~~~-------~d~~~l~~~l~~~~~---~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~ 208 (384)
T 1bs0_A 142 LSPSQ---LRRFAH-------NDVTHLARLLASPCP---GQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHG 208 (384)
T ss_dssp TSSSE---EEEECT-------TCHHHHHHHHHSCCS---SCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTT
T ss_pred HcCCC---EEEeCC-------CCHHHHHHHHHhcCC---CCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcc
Confidence 34554 666653 578999999975321 14577788889999999999999999999999999999997
Q ss_pred ccccc--ChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceecc
Q 046506 85 GSACI--CPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITL 162 (310)
Q Consensus 85 ~~~~~--~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 162 (310)
.+.+. ...... ..+ ...|+++.|+||+++ |.| |+++++ ++.+.........|... .
T Consensus 209 ~~~~~~~~~~~~~-~~~-~~~di~~~s~sK~~~-~~G-G~~~~~-~~~~~~l~~~~~~~~~~-----------------~ 266 (384)
T 1bs0_A 209 TGVIGEQGRGSCW-LQK-VKPELLVVTFGKGFG-VSG-AAVLCS-STVADYLLQFARHLIYS-----------------T 266 (384)
T ss_dssp TTTSSGGGCCHHH-HTT-CCCSEEEEESSSTTS-SCC-EEEEEC-HHHHHHHHHHCHHHHSS-----------------B
T ss_pred cceecCCCCchHH-hcC-CCCcEEEeeccchhh-ccC-cEEEeC-HHHHHHHHHhchhhhcC-----------------C
Confidence 65432 010011 111 248999999999987 556 777764 44433221111111111 0
Q ss_pred CCC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccch
Q 046506 163 SRR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLS 241 (310)
Q Consensus 163 ~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
+.. ....++.++++.+...+.+++.++..++++++.+.|+++ ++++. ++..+++.+.+..
T Consensus 267 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~----------------- 327 (384)
T 1bs0_A 267 SMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFTLA-DSCSAIQPLIVGD----------------- 327 (384)
T ss_dssp CCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCEEC-SCCSSBCCEEEES-----------------
T ss_pred CCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc-CCccc-CCCCCEEEEEeCC-----------------
Confidence 001 122233444544421156788899999999999999987 78876 3455666666643
Q ss_pred hHHHHHHHHHHHHHHHHhcCcEEEEEeEE----CCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 242 EEERINEFNRELLESINASGKAYMTHAVL----GGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 242 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
.....++.+.|.++|. .+.+... .+.+.+|++++ ..++++++++++++|+++
T Consensus 328 -----~~~~~~l~~~l~~~gi-~v~~~~~~~~~~~~~~~Ri~~~-~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 328 -----NSRALQLAEKLRQQGC-WVTAIRPPTVPAGTARLRLTLT-AAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp -----HHHHHHHHHHHHHTTE-ECCEECTTSSCTTCEEECCBCC-TTCCHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHCCc-EEEeecCCCCCCCCceEEEEEc-CCCCHHHHHHHHHHHHhh
Confidence 1112467777777764 4333221 23579999966 578999999999999875
No 78
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.78 E-value=2.4e-18 Score=158.65 Aligned_cols=246 Identities=10% Similarity=0.037 Sum_probs=156.7
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|+. ++.+|.++++.+.+|+++|+++|++. +.+|++++++|++|.+.| +++|+++|++||+++++
T Consensus 142 ~~~~g~~---~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~ 212 (406)
T 1xi9_A 142 VKFYGGK---PVEYRTIEEEDWQPDIDDIRKKITDR------TKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVIS 212 (406)
T ss_dssp HHHTTCE---EEEEEEEGGGTSEECHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHcCCE---EEEeecCCCcCCcCCHHHHHHhhCcC------ceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 3446666 88999875324679999999999653 457778888999999877 99999999999999999
Q ss_pred ecccccccccCh--hhhhhhcCCCCC-Ceeeeecccccccc-cceEEEEE-eCc----hhHHhhhccCCccccccccccc
Q 046506 80 DAAYAGSACICP--EFRHFIDGVEGA-DSFSLNAHKWFFTT-LDCCCLWV-KDP----SDLVNSLSTNPEYLKNKATESK 150 (310)
Q Consensus 80 D~a~~~~~~~~~--~~~~~~~~~~~~-D~~~~~~hK~l~~p-~g~g~l~v-~~~----~~~~~~~~~~~~y~~~~~~~~~ 150 (310)
|++|+.+....+ .... .. .+. |+++.|+||+++.| ..+|++++ .++ ..+....... .+. ..
T Consensus 213 De~~~~~~~~~~~~~~~~-~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l~~~l~~~~-~~~--~~---- 282 (406)
T 1xi9_A 213 DEIYDLMTYEGEHISPGS-LT--KDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLA-RIR--LC---- 282 (406)
T ss_dssp ECTTTTCBSSSCCCCHHH-HC--SSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHHHHHHHHH-HHT--CC----
T ss_pred EcCccccccCCCCCCHHH-cC--CCceEEEEeccccccCCCccEEEEEEEecCchhHHHHHHHHHHHH-Hhh--cC----
Confidence 999987654111 1111 11 235 77889999998733 22788873 344 3332221100 000 00
Q ss_pred cccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEE-EEEcCC-cch
Q 046506 151 QVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVC-FRVSPS-AVM 228 (310)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~-~~~~~~-~~~ 228 (310)
.-......+.++++. +.++++++.++..++.+++.+.|.++|++++.. +..+++. +.+... ..
T Consensus 283 ------------~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~~~- 347 (406)
T 1xi9_A 283 ------------PNTPAQFAAIAGLTG-PMDYLKEYMKKLKERRDYIYKRLNEIPGISTTK-PQGAFYIFPKIEVGPWK- 347 (406)
T ss_dssp ------------SCSHHHHHHHHHHHS-CCHHHHHHHHHHHHHHHHHHHHHHTSTTEECCC-CCBSSEECCEECSCSCS-
T ss_pred ------------CCHHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHHhCCCCeeec-CCeeEEEEEecCccCCC-
Confidence 001122233334432 345678888999999999999999988988764 3444333 344420 00
Q ss_pred hhhhhhhccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 229 DKLKTKYENSLLSEEERINEFNRELLESIN-ASGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
+ ..++.+.+. +.|.....+..+. +.+++|+|+. +++++++.+++.|+++++++.
T Consensus 348 -------------~-------~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~---~~~~~i~~~~~~l~~~l~~~~ 404 (406)
T 1xi9_A 348 -------------N-------DKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL---PPIEILEEAMDRFEKFMKERL 404 (406)
T ss_dssp -------------S-------HHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC---SCHHHHHHHHHHHHHHHHHC-
T ss_pred -------------C-------HHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec---CCHHHHHHHHHHHHHHHHHHh
Confidence 0 135666665 5664333322221 2568999954 789999999999999887653
No 79
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.78 E-value=2.3e-18 Score=156.74 Aligned_cols=246 Identities=13% Similarity=0.099 Sum_probs=154.9
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|+. ++++|.++ ++.+|+++|++++++. +.+|+ .+|++|.+.|+++|+++|++||+++++|++
T Consensus 95 ~~~~g~~---~~~~~~~~--~~~~d~~~l~~~~~~~------~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~D~~ 160 (374)
T 3uwc_A 95 IVQAGAT---PVLVDSEN--GYVIDPEKIEAAITDK------TKAIM---PVHYTGNIADMPALAKIAKKHNLHIVEDAC 160 (374)
T ss_dssp HHHTTCE---EEEECBCT--TSSBCGGGTGGGCCTT------EEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECT
T ss_pred HHHcCCE---EEEEecCC--CCCcCHHHHHHhCCCC------ceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEEeCC
Confidence 3456776 89999984 4689999999998753 33444 667899999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecc--cccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAH--KWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~h--K~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
|+.+....... .+ ...|++++|+| |+++++...|+++.+++.......... ...... .+ ...
T Consensus 161 ~~~g~~~~~~~----~~-~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~----~~~~~~-----~~--~~~ 224 (374)
T 3uwc_A 161 QTILGRINDKF----VG-SWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYR----NHGLIN-----RD--VCV 224 (374)
T ss_dssp TCTTCEETTEE----TT-SSSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHT----BTTEEE-----TT--EES
T ss_pred CccCceeCCee----cc-ccccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHH----hcCccc-----cC--ccc
Confidence 98665422111 11 13699999988 999764446666666554432221111 000000 00 000
Q ss_pred ccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCC-eEEecCCCc---eEEEEEEcCCcchhhhhhhhc
Q 046506 161 TLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKR-FEVVFPRHF---AVVCFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~-~~v~~~~~~---~~v~~~~~~~~~~~~~~~~~~ 236 (310)
..+..+...++.+++.....++++++.++..++++++.+.|.++++ +++...+.. ..+.|.+...+
T Consensus 225 ~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 294 (374)
T 3uwc_A 225 EYGINCRMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRVKY---------- 294 (374)
T ss_dssp SCCCBCBCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEETT----------
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEcCC----------
Confidence 1111222233444444444567788899999999999999999887 877533321 11223332211
Q ss_pred cccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE------------------------CCEeEEEEEccCCCCCHHHHHH
Q 046506 237 NSLLSEEERINEFNRELLESINASGKAYMTHAVL------------------------GGIYAIRFAAGATLTEERHVMV 292 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~------------------------~~~~~iRis~~~~~~t~edi~~ 292 (310)
..++.+.|.++|.. +.+... .....+|++++ +++|++||++
T Consensus 295 -------------~~~l~~~L~~~gi~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~-~~~t~edi~~ 359 (374)
T 3uwc_A 295 -------------RDQLFQYLKDNGIE-VKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAH-PYLTEEEINY 359 (374)
T ss_dssp -------------HHHHHHHHHHTTBC-CBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCC-TTSCHHHHHH
T ss_pred -------------HHHHHHHHHHCCCc-cccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCC-CCCCHHHHHH
Confidence 13566777777753 222110 01278999955 6899999999
Q ss_pred HHHHHHHHHHH
Q 046506 293 AWTVVQEHLEA 303 (310)
Q Consensus 293 li~~l~~~~~~ 303 (310)
++++|++++++
T Consensus 360 ~~~~l~~~l~~ 370 (374)
T 3uwc_A 360 IIKKVREFYLE 370 (374)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99999998754
No 80
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.78 E-value=6e-18 Score=166.18 Aligned_cols=271 Identities=12% Similarity=0.036 Sum_probs=163.5
Q ss_pred ceecCCCCCCEEEEecCCCC---CcccCHHHH-----HHHHHHH-HH-cCC-Cc-EEEEEeccCCcccccCChHHHHHHH
Q 046506 3 AQIVGIDVKNFRAIKTTKSS---SYGLSPDSL-----MAKINSD-VE-AGL-IP-LFLCATIGTTAITAVDTLKPLCDVA 70 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~---~~~id~~~L-----e~~i~~~-~~-~~~-~~-~~v~~~~~~~~~G~~~pl~~I~~l~ 70 (310)
+.+.|.. +++++.+.++ .+.+|+++| +++|++. .+ .+. .| .+++++++ |.+|.+.|+++|+++|
T Consensus 231 ~~l~Ga~---~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la 306 (730)
T 1c4k_A 231 LAMAGGR---PVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRI 306 (730)
T ss_dssp TTTTCCE---EEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHH
T ss_pred HHHCCCE---EEEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHH
Confidence 3455665 7888775431 134788888 8888653 11 001 12 46777665 5799999999999999
Q ss_pred HHhCcEEEeecccccccccChhhh---hhhcCCCCCC----eeeeecccccccccceEEEEEeCchhHHhhhccCCcccc
Q 046506 71 KQFGIWVHVDAAYAGSACICPEFR---HFIDGVEGAD----SFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLK 143 (310)
Q Consensus 71 ~~~g~~l~vD~a~~~~~~~~~~~~---~~~~~~~~~D----~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~ 143 (310)
++||+++|||+||+++....+..+ .......++| +++.|+||++++|.++|+++++++.. . ....++.
T Consensus 307 ~~~g~~livDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l-~----g~~~~i~ 381 (730)
T 1c4k_A 307 GHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHI-K----GQLRYCD 381 (730)
T ss_dssp GGGBSEEEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGG-T----TSTTCCC
T ss_pred HHcCCeEEEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhh-c----CcccccC
Confidence 999999999999976544333222 1111012577 99999999999999999999988742 1 0011111
Q ss_pred ccccccccccCCCCceeccCCCc--chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcC-CCCeEEecCCC------
Q 046506 144 NKATESKQVVDYKDWQITLSRRF--RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGS-DKRFEVVFPRH------ 214 (310)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~-~~~~~v~~~~~------ 214 (310)
... ++.....++.+.+. ..+++.++++.+..++..+++++..++++++++.|.+ ++|++++.+..
T Consensus 382 ~~~------~~~~~~~~~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~ 455 (730)
T 1c4k_A 382 HKH------FNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKW 455 (730)
T ss_dssp HHH------HHHHHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEG
T ss_pred HHH------HHHHHHHhCCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccc
Confidence 000 00000011112221 2234445666665544567788999999999999988 78999875421
Q ss_pred ------------------------------c---eE----EEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHH
Q 046506 215 ------------------------------F---AV----VCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESI 257 (310)
Q Consensus 215 ------------------------------~---~~----v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (310)
. .+ +++..++.+. ..+.+... ..-...+.+.|
T Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~---~~g~~~~~--------g~~~~~l~~~L 524 (730)
T 1c4k_A 456 EDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINP---ETGDYEDF--------GVPATIVANYL 524 (730)
T ss_dssp GGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEET---TTTEECSS--------CCCHHHHHHHH
T ss_pred cccccccccccchhhccCccchhccccccCCcccccCCeEEEEEeCCccc---cccccccc--------CCCHHHHHHHH
Confidence 0 01 4444421000 00000000 00114567778
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.++|. ++... +...+|++++ +++|++++++|+++|+++.+.+
T Consensus 525 ~e~GI-~v~~~---~~~~ir~~~s-~g~t~e~i~~Ll~aL~~i~~~~ 566 (730)
T 1c4k_A 525 RDHGI-IPEKS---DLNSILFLMT-PAETPAKMNNLITQLLQLQRLI 566 (730)
T ss_dssp HHTTC-CCSEE---CSSEEEEECC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHCCc-EEEEC---CCCeEEEEeC-CCCCHHHHHHHHHHHHHHHHhc
Confidence 77764 33322 3567899955 7899999999999999988765
No 81
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.77 E-value=2.4e-18 Score=158.87 Aligned_cols=246 Identities=14% Similarity=0.132 Sum_probs=157.8
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|.. ++.+|.++++.+.+ +++|+++|++. +.+|++++++|++|.+.| +++|+++|++||+++++
T Consensus 143 ~~~~g~~---~~~v~~~~~~~~~~-~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 212 (409)
T 2gb3_A 143 AKIAGVK---LIPVTRRMEEGFAI-PQNLESFINER------TKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIV 212 (409)
T ss_dssp HHHHTCE---EEEEECCGGGTSCC-CTTGGGGCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHcCCE---EEEeccCCCCCCcc-HHHHHHhhCcC------CeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 3456666 88999875323455 89999988653 457788888899999864 89999999999999999
Q ss_pred ecccccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCc
Q 046506 80 DAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDW 158 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 158 (310)
|++|+.+..... ......++...|+++.|+||+++.| ..+|+++++++............+. .
T Consensus 213 Dea~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~~~~~~~---~------------ 276 (409)
T 2gb3_A 213 DEVYSEIVFRGE-FASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKLAQGRL---A------------ 276 (409)
T ss_dssp ECTTTTCBCSSC-CCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHHHHHHSC---C------------
T ss_pred ECcccccccCCC-CCCccccCCCCEEEEecchhccCCccceEEEEEECcHHHHHHHHHHHhccC---C------------
Confidence 999987654221 1111222335789999999999644 2378888766334322211100000 0
Q ss_pred eeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEE-ecCCCceEEEEEEcCCcchhhhhhhhcc
Q 046506 159 QITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEV-VFPRHFAVVCFRVSPSAVMDKLKTKYEN 237 (310)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v-~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 237 (310)
.-......+.++++. +..+++++.++..++.+++.+.|+++ ++++ ..+.....+.+.+.+.+
T Consensus 277 ----~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~----------- 339 (409)
T 2gb3_A 277 ----PPLLEQIGSVGLLNL-DDSFFDFVRETYRERVETVLKKLEEH-GLKRFTKPSGAFYITAELPVED----------- 339 (409)
T ss_dssp ----CCHHHHHHHHHHHTC-CHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCCCSBSSEEEEECSSSC-----------
T ss_pred ----CCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHc-CceeeeCCCeeEEEEEEeCCCC-----------
Confidence 000112222333322 46678888999999999999999887 7877 43333333444443211
Q ss_pred ccchhHHHHHHHHHHHHHHHHhc------CcEEEEEe-EE-----CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 238 SLLSEEERINEFNRELLESINAS------GKAYMTHA-VL-----GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~l~~~------g~~~~~~~-~~-----~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
..++.+.|.++ | +.+.+. .. .+.+++|+++. +++++++.++++|++.+++++
T Consensus 340 ------------~~~l~~~l~~~~~~~~~g-i~v~~g~~f~~~~~~~~~~iRis~~---~~~e~i~~~~~~l~~~l~~~~ 403 (409)
T 2gb3_A 340 ------------AEEFARWMLTDFNMDGET-TMVAPLRGFYLTPGLGKKEIRIACV---LEKDLLSRAIDVLMEGLKMFC 403 (409)
T ss_dssp ------------HHHHHHHHHHSCCBTTEE-EECEEGGGGCSSTTTTSSEEEEECC---SCHHHHHHHHHHHHHHHHHHH
T ss_pred ------------HHHHHHHHHhccccccCc-EEEeCchHhCCCCCCCCCEEEEEeC---CCHHHHHHHHHHHHHHHHHhh
Confidence 13566777666 5 444432 11 13579999955 789999999999999998775
Q ss_pred hc
Q 046506 306 SA 307 (310)
Q Consensus 306 ~~ 307 (310)
++
T Consensus 404 ~~ 405 (409)
T 2gb3_A 404 SS 405 (409)
T ss_dssp C-
T ss_pred hc
Confidence 43
No 82
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.77 E-value=1e-18 Score=159.32 Aligned_cols=243 Identities=11% Similarity=0.048 Sum_probs=150.9
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
...|.. +++++.+++ ++.+|+++|+++|++. +.+|+ .++++|.+.|+++|+++|++||+++++|++|
T Consensus 94 ~~~g~~---~~~~~~~~~-~~~~d~~~l~~~l~~~------~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~ 160 (373)
T 3frk_A 94 SYTGAK---PIFVEPDIR-TYNIDPSLIESAITEK------TKAII---AVHLYGQPADMDEIKRIAKKYNLKLIEDAAQ 160 (373)
T ss_dssp HHHSCE---EEEECEETT-TTEECGGGTGGGCCTT------EEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEECTT
T ss_pred HHcCCE---EEEEecccc-ccCcCHHHHHHhcCCC------CeEEE---EECCCcCcccHHHHHHHHHHcCCEEEEECCc
Confidence 445776 899999864 4689999999999763 33444 4568999999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeee--cccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceec
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLN--AHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~--~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
+.+...... . .+ ...|++++| +||+++++...|+++.+++......... ....... .+. ...
T Consensus 161 ~~g~~~~~~--~--~~-~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~~~----~~~g~~~-----~~~--~~~ 224 (373)
T 3frk_A 161 AHGSLYKGM--K--VG-SLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKAL----SNYGSEK-----KYH--HIY 224 (373)
T ss_dssp CTTCEETTE--E--TT-SSSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHH----HBTTCSB-----TTB--CCS
T ss_pred ccCCEECCE--e--cc-ccccEEEEeCcCCCccCccceeEEEEeCCHHHHHHHHHH----HhcCccc-----CCc--ccc
Confidence 876542211 1 11 126888877 7799976344566665555433222110 0000000 000 001
Q ss_pred cCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC---ceEEEEEEcCCcchhhhhhhhccc
Q 046506 162 LSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH---FAVVCFRVSPSAVMDKLKTKYENS 238 (310)
Q Consensus 162 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~ 238 (310)
.+..+...++.+++.....++++++.++..++++++.+.|.+++ +.+...+. .+.+.|.+...+
T Consensus 225 ~g~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~------------ 291 (373)
T 3frk_A 225 KGFNSRLDELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHVWYTFVIRSEK------------ 291 (373)
T ss_dssp CCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECCCSSEEEEESS------------
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCceeeEEEEEEeCC------------
Confidence 11122233344444444456778889999999999999999886 66643221 122223332211
Q ss_pred cchhHHHHHHHHHHHHHHHHhcCcEEEEEeE--E-------------C---------CEeEEEEEccCCCCCHHHHHHHH
Q 046506 239 LLSEEERINEFNRELLESINASGKAYMTHAV--L-------------G---------GIYAIRFAAGATLTEERHVMVAW 294 (310)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--~-------------~---------~~~~iRis~~~~~~t~edi~~li 294 (310)
..++.+.|.++|.. +.+.. . . ....+|+++. +++|++||++++
T Consensus 292 -----------~~~l~~~L~~~gI~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~-~~~t~~di~~~~ 358 (373)
T 3frk_A 292 -----------RDELQKYLNNNGIG-TLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIW-YGMKNEEIEYVI 358 (373)
T ss_dssp -----------HHHHHHHHHHTTBC-CBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCC-TTCCHHHHHHHH
T ss_pred -----------HHHHHHHHHHCCCC-cccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCC-CCCCHHHHHHHH
Confidence 13567777777753 22111 0 0 0278999955 789999999999
Q ss_pred HHHHHHH
Q 046506 295 TVVQEHL 301 (310)
Q Consensus 295 ~~l~~~~ 301 (310)
++|++..
T Consensus 359 ~~l~~~~ 365 (373)
T 3frk_A 359 DKINAWK 365 (373)
T ss_dssp HHHHTCC
T ss_pred HHHHHHh
Confidence 9998654
No 83
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.77 E-value=2.6e-18 Score=157.03 Aligned_cols=245 Identities=13% Similarity=0.090 Sum_probs=155.8
Q ss_pred ceecCCCCCCEEEEecC--CCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCccccc---CChHHHHHHHHHhCcEE
Q 046506 3 AQIVGIDVKNFRAIKTT--KSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAV---DTLKPLCDVAKQFGIWV 77 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~--~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~---~pl~~I~~l~~~~g~~l 77 (310)
++..|.. ++.+|.+ +++.+.+|+++|+++|++ +.++++++++|++|.+ +++++|+++|++||+++
T Consensus 131 ~~~~g~~---~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~l 200 (391)
T 4dq6_A 131 VKNNNRE---LIISPLQKLENGNYIMDYEDIENKIKD-------VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKI 200 (391)
T ss_dssp HHHTTCE---EEECCCEECTTSCEECCHHHHHHHCTT-------EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEE
T ss_pred HHHcCCe---EEeeeeeecCCCceEeeHHHHHHHhhc-------CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEE
Confidence 3445665 8889987 445567999999999975 3478888899999999 66889999999999999
Q ss_pred EeecccccccccChhhhhhhcCC----CCCCeeeeeccccccc-ccceEEEEEeCchhHHhhhccCCccccccccccccc
Q 046506 78 HVDAAYAGSACICPEFRHFIDGV----EGADSFSLNAHKWFFT-TLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQV 152 (310)
Q Consensus 78 ~vD~a~~~~~~~~~~~~~~~~~~----~~~D~~~~~~hK~l~~-p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~ 152 (310)
++|++|+.+......... ...+ ....++..|+||+++. ...+|+++.+++............+...
T Consensus 201 i~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------- 271 (391)
T 4dq6_A 201 ISDEIHSDIILKKHKHIP-MASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTRIDIK-------- 271 (391)
T ss_dssp EEECTTTTCBCTTCCCCC-GGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTTCC--------
T ss_pred EeeccccccccCCCCccC-HHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHHHHHHHHHhhcCC--------
Confidence 999999765432211111 0111 0123778899999963 3457777776644432221110000000
Q ss_pred cCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcC-CCCeEEecCCCceEEEEEEcCCcchhhh
Q 046506 153 VDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGS-DKRFEVVFPRHFAVVCFRVSPSAVMDKL 231 (310)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~-~~~~~v~~~~~~~~v~~~~~~~~~~~~~ 231 (310)
..-.....++.++++. ..+.++++.++..++++++.+.|++ +|++++..+....++.+.+.....
T Consensus 272 ---------~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 337 (391)
T 4dq6_A 272 ---------RNNCFSLVATEASYNN-GESWLESFLEYLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSALGL---- 337 (391)
T ss_dssp ---------CCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCCSBSSEEEEECGGGCC----
T ss_pred ---------CCCHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEecCCCccEEEEEEhhhcCC----
Confidence 0000122233333432 3456788889999999999999987 789988744333333355543110
Q ss_pred hhhhccccchhHHHHHHHHHHHHHHHHhc-CcEEEEEe-EE--CCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 232 KTKYENSLLSEEERINEFNRELLESINAS-GKAYMTHA-VL--GGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~-~~--~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
+ ..++.+.|.++ | +.+.+. .. .+.+++|+|++ +++++++.++++|++.+
T Consensus 338 ----------~-------~~~~~~~l~~~~g-i~v~~g~~~~~~~~~~iRis~~---~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 338 ----------S-------DEELESILVQKGK-VALNQGNSFGIGGSGYQRINLA---CPRSMLEEALIRIKNAI 390 (391)
T ss_dssp ----------C-------HHHHHHHHHHTTC-EECEEGGGGCTTCTTEEEEECC---SCHHHHHHHHHHHHHHH
T ss_pred ----------C-------HHHHHHHHHHhCC-EEeeCchhhCCCCCCeEEEEEc---CCHHHHHHHHHHHHHHh
Confidence 0 14577778777 6 444432 22 23578999955 58899999999998764
No 84
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.77 E-value=1e-17 Score=151.26 Aligned_cols=236 Identities=11% Similarity=0.031 Sum_probs=155.5
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHH--hCcEEEee
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQ--FGIWVHVD 80 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~--~g~~l~vD 80 (310)
++..|.. ++.+|.+++ +.+|+++|+++|++.. .+.+|++++++|++|.+.|++++.++|+. ||+++++|
T Consensus 109 ~~~~g~~---~~~~~~~~~--~~~d~~~l~~~l~~~~----~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~D 179 (354)
T 3ly1_A 109 AKIAGMK---VTKVKMLDN--WAFDIEGLKAAVAAYS----GPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVD 179 (354)
T ss_dssp HHHTTCE---EEEECCCTT--SCCCHHHHHHHHHTCS----SCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEE
T ss_pred HHHcCCE---EEEecCCCC--CCCCHHHHHHHhccCC----CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEe
Confidence 3456666 899999864 5899999999997311 25678888999999999999888888887 99999999
Q ss_pred cccccccccChh--hhhhhcCCCCCCeeeeecccccc-cccceEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 81 AAYAGSACICPE--FRHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 81 ~a~~~~~~~~~~--~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
++|+.+...... ...........++++.|+||+++ ...++|+++. ++............+
T Consensus 180 e~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~---------------- 242 (354)
T 3ly1_A 180 EAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVA-HPTVIALMGRYVAGE---------------- 242 (354)
T ss_dssp CTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEEC-CHHHHHHHGGGTTCS----------------
T ss_pred ccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeec-CHHHHHHHHHhcCCC----------------
Confidence 999765433210 01111111135588899999997 4456787766 444433221111110
Q ss_pred ceeccCCCcchHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhc
Q 046506 158 WQITLSRRFRSLKLWFVLRNY-GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~ 236 (310)
....+..+++...+ ..+.++++.++..++++++.+.|.++ ++.+. ++..+++.+.+...
T Consensus 243 -------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~-~~~~~~~~~~~~~~----------- 302 (354)
T 3ly1_A 243 -------KINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDL-KLPYL-PSEGNFVFHQLVVP----------- 302 (354)
T ss_dssp -------CCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCCSSEEEEECSSC-----------
T ss_pred -------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCCceEEEEECCCC-----------
Confidence 01222233333333 23567888899999999999999876 77765 44566666665431
Q ss_pred cccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 237 NSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
..++.+.|.+.|.. +.+......+++|+|+. +++|+++++++|+++++
T Consensus 303 -------------~~~~~~~l~~~gi~-v~g~~~~~~~~iRis~~----~~~~i~~~~~~l~~~l~ 350 (354)
T 3ly1_A 303 -------------LKDYQTHMADAGVL-IGRAFPPADNWCRISLG----TPQEMQWVADTMREFRK 350 (354)
T ss_dssp -------------HHHHHHHHHHTTEE-CCCCCTTCTTEEEEECC----CHHHHHHHHHHHHHHHH
T ss_pred -------------HHHHHHHHHHCCEE-EeecCCCCCCEEEEEcC----CHHHHHHHHHHHHHHHH
Confidence 13566777777743 33222234678999943 68999999999998765
No 85
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.76 E-value=1.5e-17 Score=153.71 Aligned_cols=257 Identities=12% Similarity=0.064 Sum_probs=161.6
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|+. ++.+|.++++.+.+|+++|+++|++. +.++++++++|++|.+.| +++|+++|++||+++++
T Consensus 145 ~~~~g~~---~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 215 (416)
T 1bw0_A 145 CKAYGIG---MHFYNCRPENDWEADLDEIRRLKDDK------TKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFS 215 (416)
T ss_dssp HHHTTCE---EEEEEEEGGGTTEECHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHcCcE---EEEeecCcccCCCCCHHHHHHHhccC------CeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEE
Confidence 3445666 88899876434679999999998653 447788888999999999 99999999999999999
Q ss_pred ecccccccccCh----hhhhhhcCCC--CCCeeeeecccccccc-cceEEEEEeCc-hhHHhhhccCCcccccccccccc
Q 046506 80 DAAYAGSACICP----EFRHFIDGVE--GADSFSLNAHKWFFTT-LDCCCLWVKDP-SDLVNSLSTNPEYLKNKATESKQ 151 (310)
Q Consensus 80 D~a~~~~~~~~~----~~~~~~~~~~--~~D~~~~~~hK~l~~p-~g~g~l~v~~~-~~~~~~~~~~~~y~~~~~~~~~~ 151 (310)
|++|+...+... .... ...+. .-++++.+++|+++.| ..+|+++++++ ..+.........+...
T Consensus 216 De~~~~~~~~g~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~------- 287 (416)
T 1bw0_A 216 DEIYAGMVFKGKDPNATFTS-VADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGML------- 287 (416)
T ss_dssp ECTTTTCBCCSSCTTCCCCC-TTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHHHH-------
T ss_pred EccccccccCCCCCCCCccC-HHHccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhHHHHHHHHHHHhcc-------
Confidence 999976433221 1111 11111 1235678999998765 24788888765 2221111000000000
Q ss_pred ccCCCCceeccCCC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhh
Q 046506 152 VVDYKDWQITLSRR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDK 230 (310)
Q Consensus 152 ~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~ 230 (310)
..+.. ....++.++++....+++++..++..++.+++.+.|+++|++.+..+...+.+.+.+......
T Consensus 288 ---------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-- 356 (416)
T 1bw0_A 288 ---------VCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEKYR-- 356 (416)
T ss_dssp ---------HTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEEEEECGGGBS--
T ss_pred ---------ccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCHHHcC--
Confidence 00001 122333444543346778899999999999999999998899876554455666666421000
Q ss_pred hhhhhccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 231 LKTKYENSLLSEEERINEFNRELLESIN-ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
. ..+ ..++.+.+. +.|.....+......+++|+|+. +++++++.+++.|.+++++.+
T Consensus 357 ------~--~~~-------~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~---~~~e~l~~~l~~l~~~l~~~~ 414 (416)
T 1bw0_A 357 ------D--IKT-------DVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTT---RPVEVYREAVERIKAFCQRHA 414 (416)
T ss_dssp ------S--CCS-------HHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC---SCHHHHHHHHHHHHHHHHHHB
T ss_pred ------C--CCC-------HHHHHHHHHHHCCEEEecccccCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHhh
Confidence 0 000 134556664 56654433222223468999963 679999999999998887643
No 86
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.76 E-value=1.2e-18 Score=159.85 Aligned_cols=250 Identities=12% Similarity=0.120 Sum_probs=154.4
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+...|.. +++++++++ ++.+|+++|+++|++. +.+|+ .++++|.+.|+++|+++|++||+++++|++
T Consensus 113 ~~~~g~~---~~~~~~~~~-~~~~d~~~l~~~~~~~------~~~v~---~~n~tG~~~~~~~i~~l~~~~~~~li~D~a 179 (391)
T 3dr4_A 113 VTYCGAT---PVLVDNDPR-TFNLDAAKLEALITPR------TKAIM---PVHLYGQICDMDPILEVARRHNLLVIEDAA 179 (391)
T ss_dssp HHHTTCE---EEEECBCTT-TCSBCGGGSGGGCCTT------EEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECT
T ss_pred HHHCCCE---EEEEecCcc-ccCcCHHHHHHhcCCC------ceEEE---EECCCCChhhHHHHHHHHHHcCCEEEEECc
Confidence 3455666 899999864 4689999999998653 33444 356889999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceecc
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITL 162 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 162 (310)
|+.+....+... ..+.++++++++.||+++++ ..|+++.+++.......... .+-..... .+ +....
T Consensus 180 ~~~g~~~~~~~~---~~~~di~~~S~s~~K~l~~g-~gg~~~~~~~~~~~~~~~~~-~~g~~~~~------~~--~~~~~ 246 (391)
T 3dr4_A 180 EAVGATYRGKKS---GSLGDCATFSFFGNAIITTG-EGGMITTNDDDLAAKMRLLR-GQGMDPNR------RY--WFPIV 246 (391)
T ss_dssp TCTTCEETTEET---TSSSSEEEEECBTTSSSCCB-SCEEEEESCHHHHHHHHHHH-BTTCCTTS------TT--CCSSC
T ss_pred ccccceECCeee---cccCCEEEEECCCCCcCCcC-CeEEEEECCHHHHHHHHHHH-hcCCCCCC------cc--ccccc
Confidence 987655433211 11223555566688999764 35555555553322211100 00000000 00 00011
Q ss_pred CCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC--C-----CceEEEEEEcCCcchhhhhhhh
Q 046506 163 SRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP--R-----HFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 163 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~--~-----~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
+..+....+.+++......+++++.++..++++++.+.|.++ ++++..+ + ...++.+.+....
T Consensus 247 g~~~~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~i~~~~~~--------- 316 (391)
T 3dr4_A 247 GFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARL-GNRVTKPHVALTGRHVFWMYTVRLGEGL--------- 316 (391)
T ss_dssp CCBCBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGG-TTSEECCCCCTTSCCCCSSEEEEECSSC---------
T ss_pred ccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CccccCcCCCCCCcceeEEEEEEECCcc---------
Confidence 222333444445444445678888999999999999999988 8877654 2 1224555554310
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE--------------------CCEeEEEEEccCCCCCHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKAYMTHAVL--------------------GGIYAIRFAAGATLTEERHVMVAWT 295 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--------------------~~~~~iRis~~~~~~t~edi~~li~ 295 (310)
.....++.+.|.++|......... .....+|+++. +.+|+|||+++++
T Consensus 317 -----------~~~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~-~~~t~edi~~~~~ 384 (391)
T 3dr4_A 317 -----------STTRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTH-AGLTEADIDRVIA 384 (391)
T ss_dssp -----------SSCHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCC-TTCCHHHHHHHHH
T ss_pred -----------chhHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCC-CCCCHHHHHHHHH
Confidence 000146777787887543322100 01468999955 7899999999999
Q ss_pred HHHHH
Q 046506 296 VVQEH 300 (310)
Q Consensus 296 ~l~~~ 300 (310)
+|+++
T Consensus 385 ~l~~~ 389 (391)
T 3dr4_A 385 ALDQV 389 (391)
T ss_dssp HHHTT
T ss_pred HHHHH
Confidence 99864
No 87
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.76 E-value=2.8e-18 Score=155.64 Aligned_cols=235 Identities=11% Similarity=0.019 Sum_probs=149.9
Q ss_pred EEEEecCC--CCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCccccc-CChHHHHHHHHHhCcEEEeeccccccccc
Q 046506 13 FRAIKTTK--SSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAV-DTLKPLCDVAKQFGIWVHVDAAYAGSACI 89 (310)
Q Consensus 13 v~~v~~~~--~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~-~pl~~I~~l~~~~g~~l~vD~a~~~~~~~ 89 (310)
++.++.++ +....+|+++++ |++. +.+|++++++|.+|.+ .|+++| +|++++||++|+.+..+
T Consensus 117 ~~~v~~~~~~~~~~~~~~~~~~--i~~~------t~~v~~~~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~~ 182 (362)
T 2c0r_A 117 THVAASSEASNYMTLPKLQEIQ--LQDN------AAYLHLTSNETIEGAQFKAFPDT------GSVPLIGDMSSDILSRP 182 (362)
T ss_dssp EEEEEECGGGTTCSCCCGGGCC--CCTT------EEEEEEESEETTTTEECSSCCCC------TTSCEEEECTTTTTSSC
T ss_pred eEEEecccccccccCCCHHHcc--cCCC------cCEEEEeCCcCccceeccccccc------CCCEEEEEChhhccCCc
Confidence 88998873 111235666654 4332 5688999999999994 889987 89999999999877654
Q ss_pred ChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC-cch
Q 046506 90 CPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRS 168 (310)
Q Consensus 90 ~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 168 (310)
.+. ...|++++++|||++ |.|+|+++++++ .+.......+ ++..... ... .....++.+ +..
T Consensus 183 ~~~--------~~~d~~~~s~~K~~g-~~G~G~l~~~~~-~~~~l~~~~~-~~~~~~~----~~~--~~~~~~t~~~~~~ 245 (362)
T 2c0r_A 183 FDL--------NQFGLVYAGAQKNLG-PSGVTVVIVRED-LVAESPKHLP-TMLRYDT----YVK--NNSLYNTPPSFGI 245 (362)
T ss_dssp CCG--------GGCSEEEEETTTTTC-CSSCEEEEEEGG-GSSSCCTTSC-GGGCHHH----HHH--TTTCSSCCCHHHH
T ss_pred cch--------hHCcEEEEecccccc-CcCcEEEEEcHH-HHhhccccCc-hHHhHHH----Hhh--ccCcCCCchHHHH
Confidence 321 124999999999996 778999998765 3222111111 1110000 000 000011111 223
Q ss_pred HHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHcCCCCe-EEecCC---CceEEEEEEcCCcchhhhhhhhccccchhH
Q 046506 169 LKLWFVLRNYGVA-NLRHFLRSHVNMAKLFERLVGSDKRF-EVVFPR---HFAVVCFRVSPSAVMDKLKTKYENSLLSEE 243 (310)
Q Consensus 169 ~~~~~~l~~~~~~-~~~~~~~~~~~~a~~l~~~L~~~~~~-~v~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
.++.++++.+... +++++.++..++++++.+.|++++++ ++..++ ...+++|.+..
T Consensus 246 ~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 306 (362)
T 2c0r_A 246 YMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLAS------------------- 306 (362)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSC-------------------
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCC-------------------
Confidence 4555666655444 78999999999999999999988546 775322 34566676543
Q ss_pred HHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 244 ERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 244 ~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
.....++.+.|.+.|.. +.+.. ...+.+|+|+. .++++||+++++++|++++++
T Consensus 307 ---~~~~~~~~~~L~~~gi~-~~~g~-~~~~~iRis~~-~~~~~e~i~~l~~~l~~~~~~ 360 (362)
T 2c0r_A 307 ---EELEKEFVKASEQEGFV-GLKGH-RSVGGLRASIY-NAVPYESCEALVQFMEHFKRS 360 (362)
T ss_dssp ---HHHHHHHHHHHHHTTEE-SCBCC-TTTCSEEEECC-TTSCHHHHHHHHHHHHHHHHH
T ss_pred ---cchHHHHHHHHHHCCCe-eccCC-CCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHh
Confidence 11124667777777753 32211 11346999976 468899999999999988764
No 88
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.76 E-value=4e-17 Score=149.54 Aligned_cols=224 Identities=15% Similarity=0.157 Sum_probs=148.6
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
..|+. ++.+|.+ |+++|+++|++. +.+|++++.+|++|.+.|+++|+++|++||+++++|++|+
T Consensus 114 ~~g~~---~~~~~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~ 177 (386)
T 1cs1_A 114 RGCYR---VLFVDQG-------DEQALRAALAEK------PKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFL 177 (386)
T ss_dssp TTSCE---EEEECTT-------CHHHHHHHHHTC------CSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTT
T ss_pred hcCCE---EEEeCCC-------CHHHHHHhhccC------CcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCc
Confidence 34554 6666652 789999999753 4478889999999999999999999999999999999998
Q ss_pred cccccChhhhhhhcCCCCCCeeeeecccccccccce--EEEEEeCchhHHhhhccCCccccccccccccccCCCCceecc
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDC--CCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITL 162 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~--g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 162 (310)
.+....+. . .++|+++.++||++++|.+. |+++++++......... ....
T Consensus 178 ~~~~~~~~------~-~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~----~~~~----------------- 229 (386)
T 1cs1_A 178 SPALQNPL------A-LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWW----ANNI----------------- 229 (386)
T ss_dssp CTTTCCGG------G-GTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHH----HHHH-----------------
T ss_pred ccccCCcc------c-cCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHH----HHhc-----------------
Confidence 77654321 1 14899999999999998874 88887764443222110 0000
Q ss_pred CCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEec-C----------------CCceEEEEEEcCC
Q 046506 163 SRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVF-P----------------RHFAVVCFRVSPS 225 (310)
Q Consensus 163 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~-~----------------~~~~~v~~~~~~~ 225 (310)
+.....+..++++..+ +.+..+.++..++++++.+.|++++.+.-.. + ...++++|.+.+.
T Consensus 230 ~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (386)
T 1cs1_A 230 GVTGGAFDSYLLLRGL--RTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGD 307 (386)
T ss_dssp TCBCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSC
T ss_pred CCCCCHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECCC
Confidence 0001222233333222 3456677778888999999998877664321 1 1267888877542
Q ss_pred cchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEEC---------------------------CEeEEEE
Q 046506 226 AVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLG---------------------------GIYAIRF 278 (310)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---------------------------~~~~iRi 278 (310)
...+.+.+.+.|.+. .+...+ ..+++|+
T Consensus 308 ------------------------~~~~~~~l~~~gi~~-~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRi 362 (386)
T 1cs1_A 308 ------------------------EQTLRRFLGGLSLFT-LAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRI 362 (386)
T ss_dssp ------------------------HHHHHHHHHTCSSSE-EBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEE
T ss_pred ------------------------HHHHHHHHHhCCcce-EcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEE
Confidence 124555666666533 211000 1379999
Q ss_pred EccCCCCCHHHHHHHHHHHHHH
Q 046506 279 AAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 279 s~~~~~~t~edi~~li~~l~~~ 300 (310)
|+. ..+++++|+.+.++|+++
T Consensus 363 s~~-~~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 363 STG-IEDGEDLIADLENGFRAA 383 (386)
T ss_dssp ECC-SSCHHHHHHHHHHHHHHH
T ss_pred EEc-cCCHHHHHHHHHHHHHHh
Confidence 977 578899999999888765
No 89
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.76 E-value=1e-18 Score=158.19 Aligned_cols=236 Identities=13% Similarity=0.036 Sum_probs=150.9
Q ss_pred EEEEecCCCCCcccCHHHHHH-HHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccCh
Q 046506 13 FRAIKTTKSSSYGLSPDSLMA-KINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICP 91 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~-~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~ 91 (310)
++.+|+++. .+.+|+++|++ +|++. +.+|++++++|++|.+.| +++++||+++++|++|+.+..+.+
T Consensus 116 ~~~v~~~~~-~~~~d~~~l~~~~i~~~------~k~v~~~~~~nptG~~~~-----~i~~~~~~~li~D~a~~~~~~~~~ 183 (360)
T 1w23_A 116 THIAASTKA-NSYQSIPDFSEFQLNEN------DAYLHITSNNTIYGTQYQ-----NFPEINHAPLIADMSSDILSRPLK 183 (360)
T ss_dssp EEEEEECGG-GTSCSCCCGGGCCCCTT------EEEEEEESEETTTTEECS-----SCCCCCSSCEEEECTTTTTSSCCC
T ss_pred eEEeecccc-cCcCCccchHhhccCCC------CCEEEEeCCCCCcceecc-----cccccCCceEEEechhhcCCCCcC
Confidence 899999752 23689999998 87543 568888899999999866 333489999999999987765432
Q ss_pred hhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCC-C-cchH
Q 046506 92 EFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSR-R-FRSL 169 (310)
Q Consensus 92 ~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~ 169 (310)
. . ..|++++++||+++ |.|+|+++++++ .+.......+.++.... .. ......+. . ....
T Consensus 184 ~-----~---~~di~~~s~sK~~~-~~G~G~~~~~~~-~~~~~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~ 245 (360)
T 1w23_A 184 V-----N---QFGMIYAGAQKNLG-PSGVTVVIVKKD-LLNTKVEQVPTMLQYAT-----HI---KSDSLYNTPPTFSIY 245 (360)
T ss_dssp G-----G---GCSEEEEETTTTTS-CTTCEEEEEEHH-HHCSCCTTCCGGGCHHH-----HH---HTTTCSSCCCHHHHH
T ss_pred c-----c---cCCEEEEEcccccC-CCCcEEEEEcHH-HHhhcccCCcchhhhhh-----hh---hccCCCCCCCHHHHH
Confidence 1 1 13899999999886 768999988754 33221111111110000 00 00001111 1 1223
Q ss_pred HHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHcCCCCe-EEecCC--Cce-EEEEEEcCCcchhhhhhhhccccchhHH
Q 046506 170 KLWFVLRNYGVA-NLRHFLRSHVNMAKLFERLVGSDKRF-EVVFPR--HFA-VVCFRVSPSAVMDKLKTKYENSLLSEEE 244 (310)
Q Consensus 170 ~~~~~l~~~~~~-~~~~~~~~~~~~a~~l~~~L~~~~~~-~v~~~~--~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
++.++++.+... +++++.++..++++++.+.|++++++ .+..++ ..+ ++++.+.+.
T Consensus 246 ~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 306 (360)
T 1w23_A 246 MLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNE------------------- 306 (360)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSH-------------------
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCCC-------------------
Confidence 445556555444 68899999999999999999988765 554222 334 677766431
Q ss_pred HHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 245 RINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 245 ~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
....++.+.|.+.|... .+.. ...+.+|+|++ ++++++++++++++|++++++
T Consensus 307 ---~~~~~~~~~l~~~gi~~-~~~~-~~~~~iRis~~-~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 307 ---ELNQQFLAKAKEQGFVG-LNGH-RSVGGCRASIY-NAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp ---HHHHHHHHHHHHTTEES-CBCC-TTTCSEEEECC-TTSCHHHHHHHHHHHHHHHHH
T ss_pred ---ccHHHHHHHHHHCCeee-ecCC-CCCCeEEEEec-CCCCHHHHHHHHHHHHHHHhh
Confidence 11235666677777533 2211 12467999966 578999999999999987653
No 90
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.76 E-value=2.3e-18 Score=156.88 Aligned_cols=244 Identities=11% Similarity=0.130 Sum_probs=155.4
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD 80 (310)
+..|.. ++.+|.++.+.+.+|+++|+++|++. +.+|+++.++|++|.+.| +++|+++|++||+++++|
T Consensus 123 ~~~g~~---~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~D 193 (375)
T 3op7_A 123 KSLGAE---VDLWQIEEENGWLPDLEKLRQLIRPT------TKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSD 193 (375)
T ss_dssp HHTTCE---EEEEEEEGGGTTEECHHHHHHHCCTT------CCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHcCCE---EEEEeccccCCCCCCHHHHHHhhccC------CeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 445665 88999875445679999999999753 447788888999999999 999999999999999999
Q ss_pred ccccccccc-ChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCc
Q 046506 81 AAYAGSACI-CPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDW 158 (310)
Q Consensus 81 ~a~~~~~~~-~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 158 (310)
++|+.+... ...... ....+.+..+.+|+++.| ..+|+++. +++.... +.....+..
T Consensus 194 e~~~~~~~~~~~~~~~----~~~~~i~~~s~sK~~~~~G~r~G~v~~-~~~l~~~-~~~~~~~~~--------------- 252 (375)
T 3op7_A 194 EVYRSFSELDVPSIIE----VYDKGIAVNSLSKTYSLPGIRIGWVAA-NHQVTDI-LRDYRDYTM--------------- 252 (375)
T ss_dssp CCSCCCSSSCCCCHHH----HCTTEEEEEESSSSSSCGGGCCEEEEC-CHHHHHH-HTTTGGGTT---------------
T ss_pred cccccccccCCCchhh----hcCCEEEEeEChhhcCCcccceEEEEe-CHHHHHH-HHHHHhhhc---------------
Confidence 999765432 111111 113557788999999744 34577765 5544432 211101000
Q ss_pred eeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccc
Q 046506 159 QITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENS 238 (310)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 238 (310)
+. +.......+..+++. ....+++..++..++++.+.+.|++.+++.+..+.....+.+.+....
T Consensus 253 -~~-~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------ 317 (375)
T 3op7_A 253 -IC-AGVFDDLVAQLALAH-YQEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDM------------ 317 (375)
T ss_dssp -SC-CCHHHHHHHHHHHHT-HHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCSS------------
T ss_pred -cC-CCcHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCCC------------
Confidence 00 001112222233332 234566777777889999999999888998775544444445554321
Q ss_pred cchhHHHHHHHHHHHHHHH-HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 239 LLSEEERINEFNRELLESI-NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
+ ..++...+ .+.|.....+......+++|++++. ++++++.+++.|++.+.++.
T Consensus 318 ---~-------~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~~---~~~~i~~~l~~l~~~l~~~~ 372 (375)
T 3op7_A 318 ---P-------MEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFAC---EQETLIKGLEKLSQFLRRFD 372 (375)
T ss_dssp ---C-------HHHHHHHHHHHHCEECEEGGGGTCTTEEEECCCS---CHHHHHHHHHHHHHHHGGGC
T ss_pred ---C-------HHHHHHHHHHhCCEEEeChhhhCCCCeEEEEecC---CHHHHHHHHHHHHHHHHHHh
Confidence 0 13455555 3566543333323335789999553 45899999999999887653
No 91
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.76 E-value=5.9e-18 Score=157.25 Aligned_cols=258 Identities=13% Similarity=0.067 Sum_probs=157.2
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|.. ++.+|.+++ .+.+|+++|+++|... .+.+|++++++|++|.+.| +++|+++|++||+++++
T Consensus 150 ~~~~g~~---~~~v~~~~~-~~~~d~~~l~~~l~~~-----~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~ 220 (437)
T 3g0t_A 150 CRILGQK---FESFDLFEY-RGEKLREKLESYLQTG-----QFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIE 220 (437)
T ss_dssp HHHHTCC---CEEEEGGGG-CTTHHHHHHHHHHTTT-----CCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHcCCE---EEEEeecCC-CCccCHHHHHHHHhcC-----CceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEE
Confidence 3456776 999999754 4679999999999321 1447777888999999987 77789999999999999
Q ss_pred ecccccccccCh-hh-------hhhhcCCCCCCeeeeecccccc-cccceEEEEEeCchhHH-hhhccCCcccccccccc
Q 046506 80 DAAYAGSACICP-EF-------RHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSDLV-NSLSTNPEYLKNKATES 149 (310)
Q Consensus 80 D~a~~~~~~~~~-~~-------~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~v~~~~~~~-~~~~~~~~y~~~~~~~~ 149 (310)
|++|+.+..... .. .. .......++++.|+||+++ ....+|+++++ +..+. ..-...+.+......
T Consensus 221 De~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~-- 296 (437)
T 3g0t_A 221 DLAYFGMDFRKDYSHPGEPLYQPS-VANYTDNYILALSSSKAFSYAGQRIGVLMIS-GKLYEREYPDLEESFGRLRFG-- 296 (437)
T ss_dssp ECTTTTCCTTSCCCSTTSSCCCCC-GGGTCSCEEEEEESTTTTSCGGGCCEEEEEC-HHHHHCBCGGGHHHHSCSBHH--
T ss_pred EcchhhcccCCCcCcccccchhhc-cCCCCCcEEEEEcCccCCCCccceeEEEEEC-HHHhhhhhhcccccccccchh--
Confidence 999975433210 00 00 1111246688999999987 33457888765 33332 200000000000000
Q ss_pred ccccCCCCceeccCCCcchHHHHHHHHHhCHH--H---HHHHHHHHHHHHHHHHHHHcCCCCeEEe------cC-CCceE
Q 046506 150 KQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA--N---LRHFLRSHVNMAKLFERLVGSDKRFEVV------FP-RHFAV 217 (310)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~---~~~~~~~~~~~a~~l~~~L~~~~~~~v~------~~-~~~~~ 217 (310)
... ..............+..+++...+... + ++++.++..++.+++.+.|+++ ++++. .+ ....+
T Consensus 297 ~~~--~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~ 373 (437)
T 3g0t_A 297 EAL--SSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN-GFNIVYDKDGNEPLADGFY 373 (437)
T ss_dssp HHH--HTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT-TEEESSCEETTEECCSSSE
T ss_pred HHH--HHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCEEeccccCCCCCceeEE
Confidence 000 000000000011223333333333222 2 7888999999999999999998 89887 34 45666
Q ss_pred EEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE-C-C-EeEEEEEccCCCCCHHHHHHHH
Q 046506 218 VCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVL-G-G-IYAIRFAAGATLTEERHVMVAW 294 (310)
Q Consensus 218 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~-~-~~~iRis~~~~~~t~edi~~li 294 (310)
+.+.+.+.+ ..++.+.|.++|. .+.+... . . .+.+|+|++ ++++++++.++
T Consensus 374 ~~~~~~~~~-----------------------~~~l~~~L~~~gi-~v~~~~~~~~~~~~~iRis~~--~~~~e~i~~~~ 427 (437)
T 3g0t_A 374 FTVGYKGMD-----------------------SSKLIEKFVRYGM-CAITLKTTGSKRNEAMRICTS--LLPESQFPDLE 427 (437)
T ss_dssp EEEEETTCC-----------------------HHHHHHHHHHTTE-ECEESTTTTCCCTTCEEEECS--SSCGGGHHHHH
T ss_pred EEEecCCCC-----------------------HHHHHHHHHHcCe-EEeeccccCCCCCCEEEEEEe--cCCHHHHHHHH
Confidence 767665321 1356777777764 4443321 1 1 167999966 35899999999
Q ss_pred HHHHHHHH
Q 046506 295 TVVQEHLE 302 (310)
Q Consensus 295 ~~l~~~~~ 302 (310)
++|+++.+
T Consensus 428 ~~l~~~~~ 435 (437)
T 3g0t_A 428 KRLQMLNA 435 (437)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998764
No 92
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.76 E-value=1e-17 Score=155.13 Aligned_cols=262 Identities=10% Similarity=0.045 Sum_probs=152.8
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
...|.. ++.+|++++ ++.+|+++|+++|++. +.+|++ ++++|.+.|+++|+++|++||+++++|++|
T Consensus 100 ~~~g~~---~~~~~~~~~-~~~~d~~~l~~~i~~~------~~~v~~---~~~~G~~~~~~~i~~~~~~~~~~li~D~a~ 166 (418)
T 2c81_A 100 LNVNAL---PVFVDVEAD-TYCIDPQLIKSAITDK------TKAIIP---VHLFGSMANMDEINEIAQEHNLFVIEDCAQ 166 (418)
T ss_dssp HHTTCE---EEEECBCTT-TCSBCHHHHGGGCCTT------EEEECC---BCCTTCCCCHHHHHHHHHHTTCEEEEECTT
T ss_pred HHcCCE---EEEEecCCC-CCCcCHHHHHHhhCCC------CeEEEE---eCCcCCcccHHHHHHHHHHCCCEEEEECcc
Confidence 445666 899999863 4689999999999653 334544 347899999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCcccccccccc-ccccCCCCc----
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATES-KQVVDYKDW---- 158 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~-~~~~~~~~~---- 158 (310)
+.+..... .. ...+..++++++++||+++. ..+|+++.+++..+....... .+........ .....+.+.
T Consensus 167 ~~~~~~~~--~~-~~~~~~~~~~s~s~~K~~~~-g~~g~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 241 (418)
T 2c81_A 167 SHGSVWNN--QR-AGTIGDIGAFSCQQGKVLTA-GEGGIIVTKNPRLFELIQQLR-ADSRVYCDDSSELMHGDMQLVKKG 241 (418)
T ss_dssp CTTCEETT--EE-TTSSSSEEEEECCTTSSSCS-SSCEEEEESCHHHHHHHHHHH-BTTEEECSCGGGCCTTCBSEEECC
T ss_pred cccCccCC--Ee-cccccceEEEeccCCcccCC-CCeEEEEECCHHHHHHHHHHH-HhCccccccccccccchhhccccc
Confidence 87753211 11 11122355666666999976 355555554554332221100 0000000000 000001000
Q ss_pred e-eccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCc------eEEEEEEcCCcchhhh
Q 046506 159 Q-ITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHF------AVVCFRVSPSAVMDKL 231 (310)
Q Consensus 159 ~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~------~~v~~~~~~~~~~~~~ 231 (310)
. +..+.+...+. +++.....++++++.++..++++++.+.|.++|++++..++.. .++.+.+.+....
T Consensus 242 ~~~g~~~~~~~~~--aa~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 316 (418)
T 2c81_A 242 DIQGSNYCLSEFQ--SAILLDQLQELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDPVKFG--- 316 (418)
T ss_dssp SSCCCBCCCCHHH--HHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEECGGGTT---
T ss_pred cccCcCCCcCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEcccccc---
Confidence 0 00111122222 2222222345778888889999999999999999998754432 2455666520000
Q ss_pred hhhhccccchhHHHHHHHHHHHHHHHHhc-CcE---EEEEeEE----------------------------CC-------
Q 046506 232 KTKYENSLLSEEERINEFNRELLESINAS-GKA---YMTHAVL----------------------------GG------- 272 (310)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~---~~~~~~~----------------------------~~------- 272 (310)
..+ ..++.+.|.++ |.. ...+... ..
T Consensus 317 --------~~~-------~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (418)
T 2c81_A 317 --------GLN-------ADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERA 381 (418)
T ss_dssp --------TCC-------HHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHH
T ss_pred --------ccC-------HHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHH
Confidence 000 13566777777 754 2221100 00
Q ss_pred -EeEEEEEccCCCC-CHHHHHHHHHHHHHHHHHH
Q 046506 273 -IYAIRFAAGATLT-EERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 273 -~~~iRis~~~~~~-t~edi~~li~~l~~~~~~~ 304 (310)
...||++++ +++ |+|||++++++|+++++.+
T Consensus 382 ~~~~lrl~~~-~~~gt~edi~~~~~~l~~~~~~~ 414 (418)
T 2c81_A 382 SGQSIVIHHA-ILLAEPSHLSLLVDAVAELARKF 414 (418)
T ss_dssp HHHEEEEEGG-GGGSCHHHHHHHHHHHHHHHHTT
T ss_pred HhCEEEecCC-ccCCCHHHHHHHHHHHHHHHHhh
Confidence 258999966 689 9999999999999987654
No 93
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.76 E-value=2.4e-17 Score=151.76 Aligned_cols=227 Identities=13% Similarity=0.098 Sum_probs=145.3
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
...|+. +++++. .|+++|+++|++. +.+|++++++|++|.+.|+++|+++|++||+++|+|++|
T Consensus 126 ~~~g~~---~~~~~~-------~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~ 189 (398)
T 1gc0_A 126 GEFGVK---LRHVDM-------ADLQALEAAMTPA------TRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTY 189 (398)
T ss_dssp GGGTCE---EEEECT-------TCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTT
T ss_pred HHcCCE---EEEECC-------CCHHHHHHhcCCC------CeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCC
Confidence 345555 666654 2789999998753 568888999999999999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceec
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
+.+....+. . .++|+++.|+||++++|.+ .|+++.+++ .+...+.....++...
T Consensus 190 ~~~~~~~~~------~-~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~-~~~~~~~~~~~~~~~~---------------- 245 (398)
T 1gc0_A 190 CTPYLQRPL------E-LGADLVVHSATKYLSGHGDITAGIVVGSQA-LVDRIRLQGLKDMTGA---------------- 245 (398)
T ss_dssp THHHHCCGG------G-GTCSEEEEETTTTTTCSSSCCCEEEEECHH-HHHHHHHTHHHHHTCC----------------
T ss_pred cccccCCch------h-hCceEEEECCccccCCCCCCeEEEEEEChH-HHHHHHHHHhhccCCC----------------
Confidence 877653321 1 1589999999999998876 577776544 3322221100000000
Q ss_pred cCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEE--------------ecC---CCceEEEEEEcC
Q 046506 162 LSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEV--------------VFP---RHFAVVCFRVSP 224 (310)
Q Consensus 162 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v--------------~~~---~~~~~v~~~~~~ 224 (310)
.......++++..+ +.+..++++..++++.+.+.|.+++++.- ..+ ...++++|.+.+
T Consensus 246 ---~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 320 (398)
T 1gc0_A 246 ---VLSPHDAALLMRGI--KTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG 320 (398)
T ss_dssp ---CCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETT
T ss_pred ---CCCHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC
Confidence 01233344444333 34567778888888888888887665532 111 246788887754
Q ss_pred CcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEE------------EeE------------ECC--EeEEEE
Q 046506 225 SAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMT------------HAV------------LGG--IYAIRF 278 (310)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~------------~~~------------~~~--~~~iRi 278 (310)
. . ......+.+.+..... +.. ..+ .+.||+
T Consensus 321 ~---------------------~---~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRi 376 (398)
T 1gc0_A 321 G---------------------I---GAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRL 376 (398)
T ss_dssp H---------------------H---HHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEE
T ss_pred C---------------------H---HHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEE
Confidence 1 1 1222333333332211 100 001 379999
Q ss_pred EccCCCCCHHHHHHHHHHHHHH
Q 046506 279 AAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 279 s~~~~~~t~edi~~li~~l~~~ 300 (310)
|+. ..+++++|+.+.++|+++
T Consensus 377 s~g-~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 377 SVG-LEDIDDLLADVQQALKAS 397 (398)
T ss_dssp ECC-SSCHHHHHHHHHHHHHHH
T ss_pred EeC-cCCHHHHHHHHHHHHHhc
Confidence 977 589999999999999865
No 94
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.76 E-value=2.1e-17 Score=151.32 Aligned_cols=247 Identities=11% Similarity=0.023 Sum_probs=154.8
Q ss_pred eecCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 4 QIVGIDVKNFRAIKTTKS-SSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~-~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
+..|.. ++.+|.+++ +.+.+|+++|+++|++. .+.+|++++++|++|.+.| +++|+++|++||+++++
T Consensus 129 ~~~g~~---~~~v~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 200 (390)
T 1d2f_A 129 EGNQRT---VMPVALEKQADGWFCDMGKLEAVLAKP-----ECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVIS 200 (390)
T ss_dssp HHTTCE---EEEEECEECSSSEECCHHHHHHHHTST-----TEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred HHCCCE---EEEeecccCCCccccCHHHHHHHhccC-----CCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEE
Confidence 445665 888998754 24569999999999642 1457777888999999977 88999999999999999
Q ss_pred ecccccccccChhhhhhhcCCC-CC-Ceeeeecccccccc-cceEEEEEeCchhHHhhhccCC-ccccccccccccccCC
Q 046506 80 DAAYAGSACICPEFRHFIDGVE-GA-DSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNP-EYLKNKATESKQVVDY 155 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~-~~-D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~-~y~~~~~~~~~~~~~~ 155 (310)
|++|+.+......... ...+. .. |. ..++||+++.| ..+|+++++++........... .+.
T Consensus 201 De~~~~~~~~g~~~~~-~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~------------- 265 (390)
T 1d2f_A 201 DEIHMDMVWGEQPHIP-WSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDG------------- 265 (390)
T ss_dssp ECTTTTCBCSSSCCCC-GGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHTTSC-------------
T ss_pred EccccccccCCCCCcC-HHHcchhhHhh-ccCccHhhcccChhheEEEECCHHHHHHHHHHHhhhcc-------------
Confidence 9999875543211111 11111 12 56 89999999743 3468888766544322211100 000
Q ss_pred CCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcC-CCCeEEecCCCceEE-EEEEcCCcchhhhhh
Q 046506 156 KDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGS-DKRFEVVFPRHFAVV-CFRVSPSAVMDKLKT 233 (310)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~-~~~~~v~~~~~~~~v-~~~~~~~~~~~~~~~ 233 (310)
+...-.....++.++++. +.+.+++..++..++.+++.+.|++ +|++++. ++..+++ .+.+.....
T Consensus 266 ----~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~~~------ 333 (390)
T 1d2f_A 266 ----LSSPSVLALTAHIAAYQQ-GAPWLDALRIYLKDNLTYIADKMNAAFPELNWQ-IPQSTYLAWLDLRPLNI------ 333 (390)
T ss_dssp ----CCSCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCC-CCSBCSEEEEECGGGCC------
T ss_pred ----cCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEe-cCCccEEEEEEccccCC------
Confidence 000000112223334432 3556788888999999999999988 7888765 3444444 455543100
Q ss_pred hhccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEe-EE--CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 234 KYENSLLSEEERINEFNRELLESIN-ASGKAYMTHA-VL--GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~-~~--~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+ ..++.+.|. +.|. .+.+. .. .+.+++|+|++. ++++++.+++.|++.+.++
T Consensus 334 --------~-------~~~l~~~l~~~~gi-~v~~g~~f~~~~~~~~Ris~~~---~~~~l~~~l~~l~~~l~~~ 389 (390)
T 1d2f_A 334 --------D-------DNALQKALIEQEKV-AIMPGYTYGEEGRGFVRLNAGC---PRSKLEKGVAGLINAIRAV 389 (390)
T ss_dssp --------C-------HHHHHHHHHHTTCE-ECEEGGGGCGGGTTEEEEECCS---CHHHHHHHHHHHHHHHHHH
T ss_pred --------C-------HHHHHHHHHHHcCE-EeeCccccCCCCCCeEEEEecC---CHHHHHHHHHHHHHHHHhh
Confidence 0 135677777 4564 44432 11 134689999663 4789999999998887654
No 95
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.75 E-value=1.1e-17 Score=154.47 Aligned_cols=236 Identities=12% Similarity=0.064 Sum_probs=148.8
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhh
Q 046506 14 RAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEF 93 (310)
Q Consensus 14 ~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~ 93 (310)
+.++.++ .+.+|+++|+++|++.+ +.+|+++.+++ |...|+++|+++|++||+++++|++|+.+......+
T Consensus 146 ~~~~~~~--~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~--~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~ 216 (420)
T 3gbx_A 146 VPYGIDE--SGKIDYDEMAKLAKEHK-----PKMIIGGFSAY--SGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVY 216 (420)
T ss_dssp EEEEECT--TCSCCHHHHHHHHHHHC-----CSEEEECCTTC--CSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSS
T ss_pred EeccCCc--cCCcCHHHHHHHHHhcC-----CeEEEEecCcc--CCccCHHHHHHHHHHcCCEEEEECCcchhceecccC
Confidence 3455553 45899999999998741 34666655443 568899999999999999999999987665432211
Q ss_pred hhhhcCCCCCCeeeeecccccccccceEEEEEeCc--hhHHhhhccCCccccccccccccccCCCCceeccCCC-cchHH
Q 046506 94 RHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDP--SDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLK 170 (310)
Q Consensus 94 ~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~--~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 170 (310)
. ..+..+|+++.++||++++|.| |+++.++. ... +.+. .+..... .++.. ....+
T Consensus 217 ~---~~~~~~di~~~s~sK~~~g~~g-g~~~~~~~~~~~~-~~~~---~~~~~~~--------------~~~~~~~~~~a 274 (420)
T 3gbx_A 217 P---NPVPHAHVVTTTTHKTLAGPRG-GLILAKGGDEELY-KKLN---SAVFPSA--------------QGGPLMHVIAG 274 (420)
T ss_dssp C---CSTTTSSEEEEESSGGGCSCSC-EEEEESSCCHHHH-HHHH---HHHC------------------CCCCHHHHHH
T ss_pred C---cccccCCEEEeecccCCCCCCc-eEEEEcCCcHHHH-HHhh---hhcCCCC--------------CCCcchhHHHH
Confidence 1 1123489999999999987875 66666551 332 2221 0011000 01101 12233
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC-CCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHH
Q 046506 171 LWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP-RHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEF 249 (310)
Q Consensus 171 ~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (310)
+..++.....++++++.++..++++++.+.|.+ .+++++.+ ...+++.+.+.+... +
T Consensus 275 ~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~--------------~------- 332 (420)
T 3gbx_A 275 KAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLN-RGYKVVSGGTENHLFLLDLVDKNL--------------T------- 332 (420)
T ss_dssp HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHH-TTCEEGGGSCSSSEEEEECGGGTC--------------C-------
T ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHh-cCCeeccCCCCCeEEEEEcCCCCC--------------C-------
Confidence 344554444567889999999999999999988 48888754 456666666654210 0
Q ss_pred HHHHHHHHHhcCcEEEEEe-------EECCEeEEEEEccCC---CCCHHHHHHHHHHHHHHHHH
Q 046506 250 NRELLESINASGKAYMTHA-------VLGGIYAIRFAAGAT---LTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 250 ~~~l~~~l~~~g~~~~~~~-------~~~~~~~iRis~~~~---~~t~edi~~li~~l~~~~~~ 303 (310)
...+.+.+.+.|. .+.+. ...+...+|++++.. ..+++++++++++|++++..
T Consensus 333 ~~~~~~~l~~~gi-~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 395 (420)
T 3gbx_A 333 GKEADAALGRANI-TVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDN 395 (420)
T ss_dssp HHHHHHHHHHTTE-ECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCc-EeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHhC
Confidence 1345566666665 44431 111234599996532 14589999999999987754
No 96
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.75 E-value=3.3e-17 Score=151.11 Aligned_cols=237 Identities=9% Similarity=0.041 Sum_probs=150.9
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChh
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPE 92 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~ 92 (310)
++.++.++ .+.+|+++|+++|++.. +.+|++++++ .|.+.|+++|+++|++||+++++|++|+.+......
T Consensus 140 ~~~~~~~~--~~~~d~~~l~~~i~~~~-----~~~v~~~~~~--~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~ 210 (417)
T 3n0l_A 140 SCFYGVEL--DGRIDYEKVREIAKKEK-----PKLIVCGASA--YARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGE 210 (417)
T ss_dssp EEEECCCT--TSSCCHHHHHHHHHHHC-----CSEEEECCSS--CCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTS
T ss_pred eEeccCCC--CCCcCHHHHHHHHHhcC-----CeEEEECCcc--cCccCCHHHHHHHHHHcCCEEEEECccchhhhhccc
Confidence 44555653 46899999999998431 3466655544 399999999999999999999999998766543221
Q ss_pred hhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC-cchHHH
Q 046506 93 FRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKL 171 (310)
Q Consensus 93 ~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 171 (310)
.. ..+..+|++++++||++.+|.| |+++.+++.............. .++.. ....++
T Consensus 211 ~~---~~~~~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~aa~ 268 (417)
T 3n0l_A 211 HP---SPFPYAHVVSSTTHKTLRGPRG-GIIMTNDEELAKKINSAIFPGI------------------QGGPLMHVIAAK 268 (417)
T ss_dssp SC---CCTTTCSEEEEESSTTTCSCSC-EEEEESCHHHHHHHHHHHTTTT------------------CSSCCHHHHHHH
T ss_pred CC---CccccceEEEeeCccccCCCCe-eEEEECCHHHHHHHhhhhCCcc------------------cCCcHHHHHHHH
Confidence 11 1122479999999999988875 7777664544322211100000 01101 122344
Q ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC-CCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHH
Q 046506 172 WFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP-RHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFN 250 (310)
Q Consensus 172 ~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (310)
.+++.....++++++.++..++++++.+.|.+ .++++... ...+++.+.+.+... + .
T Consensus 269 ~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~--------------~-------~ 326 (417)
T 3n0l_A 269 AVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD-RKFKLVSDGTDNHLVLMSFLDREF--------------S-------G 326 (417)
T ss_dssp HHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH-TTCEEGGGSCSSSEEEEECTTSSS--------------C-------H
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCceEEEEEcccCCC--------------C-------H
Confidence 44555444567889999999999999999988 58888652 345566666544211 0 1
Q ss_pred HHHHHHHHhcCcEEEEEeEE-------CCEeEEEEEccC---CCCCHHHHHHHHHHHHHHHHH
Q 046506 251 RELLESINASGKAYMTHAVL-------GGIYAIRFAAGA---TLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 251 ~~l~~~l~~~g~~~~~~~~~-------~~~~~iRis~~~---~~~t~edi~~li~~l~~~~~~ 303 (310)
..+.+.|.+.|. .+.+... .....+|++... ...++++|++++++|++++..
T Consensus 327 ~~~~~~l~~~gi-~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 388 (417)
T 3n0l_A 327 KDADLALGNAGI-TANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDD 388 (417)
T ss_dssp HHHHHHHHHTTE-ECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCe-EEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 345566666664 4332211 123569998542 225689999999999988753
No 97
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.75 E-value=8.6e-18 Score=153.20 Aligned_cols=243 Identities=10% Similarity=0.033 Sum_probs=153.0
Q ss_pred ceecCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEE
Q 046506 3 AQIVGIDVKNFRAIKTTKS-SSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVH 78 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~-~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~ 78 (310)
++..|.. ++.+|.++. +.+.+|+++|+++|++. +.+|++++++|++|.+.| +++|+++|++||++++
T Consensus 123 ~~~~g~~---~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li 193 (383)
T 3kax_A 123 VTTNNRQ---LCVSPLQKQNDTYAIDFEHLEKQFQQG------VKLMLLCSPHNPIGRVWKKEELTKLGSLCTKYNVIVV 193 (383)
T ss_dssp HHHTTCE---EEECCCEEETTEEECCHHHHHHHHTTT------CCEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHcCCE---EEeccceecCCcEEEcHHHHHHHhCcC------CeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCCEEE
Confidence 3445665 888888742 34569999999999433 447788889999999987 5566667999999999
Q ss_pred eecccccccccChhhhhhhcCC----CCCCeeeeecccccc-cccceEEEEEeCchhHHhhhccCCcccccccccccccc
Q 046506 79 VDAAYAGSACICPEFRHFIDGV----EGADSFSLNAHKWFF-TTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVV 153 (310)
Q Consensus 79 vD~a~~~~~~~~~~~~~~~~~~----~~~D~~~~~~hK~l~-~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~ 153 (310)
+|++|+.+.......... ..+ ...++++.|+||+++ .....|++++.++............+...
T Consensus 194 ~De~~~~~~~~g~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------- 263 (383)
T 3kax_A 194 ADEIHSDIIYADHTHTPF-ASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQYRQGFH--------- 263 (383)
T ss_dssp EECTTTTCBCTTCCCCCG-GGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHTTCC---------
T ss_pred EEccccccccCCCCceeH-hhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHHHHHHHHHhhcccC---------
Confidence 999997655432111110 011 124577899999997 33457777765554432221110000000
Q ss_pred CCCCceeccCCCcchHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHcC-CCCeEEecCCCceEEE-EEEcCCcchh
Q 046506 154 DYKDWQITLSRRFRSLKLWFVLRNY--GVANLRHFLRSHVNMAKLFERLVGS-DKRFEVVFPRHFAVVC-FRVSPSAVMD 229 (310)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~l~~~L~~-~~~~~v~~~~~~~~v~-~~~~~~~~~~ 229 (310)
.......+++...+ ..+.++++.++..++.+++.+.|++ +|++++.. +..+.+. +.+.....
T Consensus 264 -----------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~-- 329 (383)
T 3kax_A 264 -----------GLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPTLSVMK-PEGSFLLWIDCSALNL-- 329 (383)
T ss_dssp -----------CCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEECC-CSBSSEEEEECGGGCC--
T ss_pred -----------CCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEec-CCceEEEEEEccccCC--
Confidence 01222233333333 3456888889999999999999987 78998874 4444443 55543110
Q ss_pred hhhhhhccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeE-E--CCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 230 KLKTKYENSLLSEEERINEFNRELLESIN-ASGKAYMTHAV-L--GGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~-~--~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
...++.+.|. +.| +.+.+.. . .+.+++|+|++ +++++++.+++.|++++
T Consensus 330 -------------------~~~~~~~~l~~~~g-i~v~~g~~~~~~~~~~iRi~~~---~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 330 -------------------SQDERTKLLEEKGK-IIVEPGEKYGLGGEEHIGINIG---CPRSVLEEILNRLRHTF 382 (383)
T ss_dssp -------------------CHHHHHHHHHHTSC-EECEESGGGCTTCTTEEEEECS---SCHHHHHHHHHHHHHHH
T ss_pred -------------------CHHHHHHHHHhhCC-EEeECchhhcCCCCCeEEEEEc---CCHHHHHHHHHHHHHHh
Confidence 0145777776 455 4554421 1 23578999955 57899999999998764
No 98
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.75 E-value=8.5e-18 Score=154.13 Aligned_cols=237 Identities=11% Similarity=0.063 Sum_probs=152.1
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD 80 (310)
+..|.. ++.+|.++++++.+|+++|+++|++. +.+|++++++|++|.+.| +++|+++|++||+++++|
T Consensus 143 ~~~g~~---~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~D 213 (389)
T 1o4s_A 143 ILAGGT---VNVVETFMSKNFQPSLEEVEGLLVGK------TKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISD 213 (389)
T ss_dssp HHTTCE---EEEEECCGGGTTCCCHHHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHcCCE---EEEEecCCccCCCCCHHHHHHhcccC------ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 445666 88999876334679999999999653 457788888999999977 999999999999999999
Q ss_pred cccccccccCh--hhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 81 AAYAGSACICP--EFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 81 ~a~~~~~~~~~--~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
++|+.+....+ .... .....+.|+++.|+||+++.| ..+|+++++ +..+.........+.
T Consensus 214 ea~~~~~~~g~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~-~~~~~~l~~~~~~~~--------------- 276 (389)
T 1o4s_A 214 EVYDSLVYTDEFTSILD-VSEGFDRIVYINGFSKSHSMTGWRVGYLISS-EKVATAVSKIQSHTT--------------- 276 (389)
T ss_dssp CTTTTSBCSSCCCCHHH-HCSSSTTEEEEEESTTTTTCGGGCCEEEECC-HHHHHHHHHHHHHHT---------------
T ss_pred ccccccccCCCCCCHhh-cCCCCCcEEEEeechhhcCCcccceEEEEeC-HHHHHHHHHHhhhcc---------------
Confidence 99987654221 1111 111235799999999998633 227888764 333322211000000
Q ss_pred ceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhcc
Q 046506 158 WQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYEN 237 (310)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 237 (310)
.+ ...+..+++...+.. ++++..++..++.+++.+.|+++ ++++..+....++.+.+. .+
T Consensus 277 ----~~--~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-~~----------- 336 (389)
T 1o4s_A 277 ----SC--INTVAQYAALKALEV-DNSYMVQTFKERKNFVVERLKKM-GVKFVEPEGAFYLFFKVR-GD----------- 336 (389)
T ss_dssp ----CS--CCHHHHHHHHHHTTC-CCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSBSSEEEEECS-SC-----------
T ss_pred ----cC--CCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHhc-CCeeecCCcceEEEEeCC-CC-----------
Confidence 00 122233334444432 27778888889999999999887 777654332333444443 11
Q ss_pred ccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 238 SLLSEEERINEFNRELLESIN-ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
..++.+.|. +.|.....+......+++|+|++ +++++++.+++.|++.+
T Consensus 337 ------------~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~---~~~~~l~~~l~~l~~~l 386 (389)
T 1o4s_A 337 ------------DVKFCERLLEEKKVALVPGSAFLKPGFVRLSFA---TSIERLTEALDRIEDFL 386 (389)
T ss_dssp ------------HHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC---SCHHHHHHHHHHHHHHH
T ss_pred ------------HHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEe---CCHHHHHHHHHHHHHHH
Confidence 135666775 56644333222222358999965 38899999999998765
No 99
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.75 E-value=2.1e-18 Score=158.66 Aligned_cols=240 Identities=10% Similarity=-0.030 Sum_probs=153.3
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccCh
Q 046506 12 NFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICP 91 (310)
Q Consensus 12 ~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~ 91 (310)
.++.||++. + ...+.+ +++ .+.+|++++++|++|.+.|+++|.++ +|+++++|++|+.+..+.+
T Consensus 146 ~~~~v~~~~-g-~~~~~~-----i~~------~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~ 209 (398)
T 2fyf_A 146 EPIIITSDP-G-SAPEPQ-----TDP------SVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVD 209 (398)
T ss_dssp CCEEEECCT-T-CCCCCC-----CCT------TCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCC
T ss_pred ceEEEecCC-C-CCCCcc-----ccC------CCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccC
Confidence 388898873 2 233321 222 24578888999999999999999887 8999999999987765432
Q ss_pred hhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhcc------CCccccccccccccccCCCCceeccCCC
Q 046506 92 EFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLST------NPEYLKNKATESKQVVDYKDWQITLSRR 165 (310)
Q Consensus 92 ~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~------~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 165 (310)
. ..+|++++++||+++.|.|+|+++++++ .+...... .++|+...... ..... ... .++..
T Consensus 210 ~--------~~~di~~~s~sK~~~~~gg~g~l~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~-~~t~~ 276 (398)
T 2fyf_A 210 I--------AETDAYYFAPQKNFASDGGLWLAIMSPA-ALSRIEAIAATGRWVPDFLSLPIAV--ENSLK-NQT-YNTPA 276 (398)
T ss_dssp G--------GGCSEEEECTTSTTCSCSSEEEEEECHH-HHHHHHHHHHTTCCCCGGGCHHHHH--HHHTT-TCC-SSCCC
T ss_pred c--------ccCcEEEEecCcccCCCCceEEEEECHH-HHHHhhcccccCCCCCcEEehHHHh--hhccc-CCC-CCCCC
Confidence 1 1389999999999998877888887654 33322110 12232211000 00000 000 01111
Q ss_pred -cchHHHHHHHHHhCHHH-HHHHHHHHHHHHHHHHHHHcCCCCeEEec-CC--Cce-EEEEEEcCCcchhhhhhhhcccc
Q 046506 166 -FRSLKLWFVLRNYGVAN-LRHFLRSHVNMAKLFERLVGSDKRFEVVF-PR--HFA-VVCFRVSPSAVMDKLKTKYENSL 239 (310)
Q Consensus 166 -~~~~~~~~~l~~~~~~~-~~~~~~~~~~~a~~l~~~L~~~~~~~v~~-~~--~~~-~v~~~~~~~~~~~~~~~~~~~~~ 239 (310)
....++.++++.+...+ ++++.++..++++++.+.|+++|++++.. ++ ..+ +++|.++...
T Consensus 277 ~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------------- 343 (398)
T 2fyf_A 277 IATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDV------------- 343 (398)
T ss_dssp HHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECTTS-------------
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCCCC-------------
Confidence 12234556666554555 88999999999999999999888999874 23 355 7788774310
Q ss_pred chhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 240 LSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 240 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+ ..++.+.|.++|.....+....+.+.+|+|+. .+++++|+++++++|++++.+
T Consensus 344 --~-------~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~-~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 344 --D-------AGTVAKILRANGIVDTEPYRKLGRNQLRVAMF-PAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp --C-------HHHHHHHHHHTTCBCCSCCTTTCSSEEEEECC-TTSCHHHHHHHHHHHHHHHHT
T ss_pred --C-------HHHHHHHHHHCCcEEecCcccCCCCEEEEEec-CCCCHHHHHHHHHHHHHHHHh
Confidence 0 14577777777754332211112468999976 579999999999999987653
No 100
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.75 E-value=3.1e-17 Score=151.59 Aligned_cols=240 Identities=11% Similarity=0.075 Sum_probs=151.3
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChh
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPE 92 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~ 92 (310)
++.++.+++ .+.+|+++|+++|++.. +.+|+++++++ |...++++|+++|++||+++++|++|+.+......
T Consensus 147 ~~~~~~~~~-~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~--~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~ 218 (425)
T 3ecd_A 147 ALQYGVSRD-TMLIDYDQVEALAQQHK-----PSLIIAGFSAY--PRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGR 218 (425)
T ss_dssp EEEECCCTT-TSSCCHHHHHHHHHHHC-----CSEEEEECSCC--CSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTS
T ss_pred eeecCCCcc-cCccCHHHHHHHHhhcC-----CcEEEEccccC--CCcCCHHHHHHHHHHcCCEEEEECcChHhhhhccc
Confidence 345555543 46899999999997531 34566654433 78899999999999999999999998766543322
Q ss_pred hhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC-cchHHH
Q 046506 93 FRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKL 171 (310)
Q Consensus 93 ~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 171 (310)
... .+..+|+++.++||++++|.| |+++.+++... +.+.. ...... .++.. ....++
T Consensus 219 ~~~---~~~~~di~~~s~sK~l~g~~~-g~~~~~~~~~~-~~~~~---~~~~~~--------------~~~~~~~~~~a~ 276 (425)
T 3ecd_A 219 HAN---PVEHAHVVTSTTHKTLRGPRG-GFVLTNDEEIA-KKINS---AVFPGL--------------QGGPLMHVIAGK 276 (425)
T ss_dssp SCC---GGGTCSEEEEESSGGGCCCSC-EEEEESCHHHH-HHHHH---HHC-------------------CCCHHHHHHH
T ss_pred ccC---chhcCcEEEecCCcccCCCCc-EEEEeCCHHHH-HHHHh---hhCccc--------------cCCccHHHHHHH
Confidence 111 112379999999999987764 77766655332 22210 000000 00101 122334
Q ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC-CCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHH
Q 046506 172 WFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP-RHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFN 250 (310)
Q Consensus 172 ~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (310)
.+++.....++++++.++..++++++.+.|.+. ++++..+ ...+++.+.+.+... + .
T Consensus 277 ~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~--------------~-------~ 334 (425)
T 3ecd_A 277 AVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVDLVTGGTDNHLLLVDLRPKGL--------------K-------G 334 (425)
T ss_dssp HHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGTC--------------C-------H
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCCceEEEEEeCCCCC--------------C-------H
Confidence 445544455778899999999999999999884 8888754 356666666654210 0 1
Q ss_pred HHHHHHHHhcCcEEEEEeEE------CCEeEEEEEccC---CCCCHHHHHHHHHHHHHHHHHH
Q 046506 251 RELLESINASGKAYMTHAVL------GGIYAIRFAAGA---TLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 251 ~~l~~~l~~~g~~~~~~~~~------~~~~~iRis~~~---~~~t~edi~~li~~l~~~~~~~ 304 (310)
..+.+.+.+.|........+ .....+|++++. ...+++++++++++|++++...
T Consensus 335 ~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 335 AQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp HHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence 34566666666543321111 123579999442 1235999999999999888664
No 101
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.75 E-value=3.1e-17 Score=150.93 Aligned_cols=248 Identities=16% Similarity=0.111 Sum_probs=152.3
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|+. ++.+|.+++ ++.+|+++|+++|++. +.+|+ .++++|.+.|+++|+++|+++|+++++|++
T Consensus 120 ~~~~g~~---~~~~~~~~~-~~~~d~~~l~~~i~~~------~~~v~---~~n~tG~~~~l~~i~~l~~~~~~~li~Dea 186 (399)
T 2oga_A 120 VSATGAT---PVPVEPHED-HPTLDPLLVEKAITPR------TRALL---PVHLYGHPADMDALRELADRHGLHIVEDAA 186 (399)
T ss_dssp HHHTTCE---EEEECBCSS-SSSBCHHHHHHHCCTT------EEEEC---CBCGGGCCCCHHHHHHHHHHHTCEECEECT
T ss_pred HHHCCCE---EEEEecCCC-CCCcCHHHHHHhcCCC------CeEEE---EeCCcCCccCHHHHHHHHHHcCCEEEEECc
Confidence 3445666 889999863 4689999999999653 33444 356789999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecc--cccccccceEEEEEeCchhHHhhhcc-CCccccccccccccccCCCCce
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAH--KWFFTTLDCCCLWVKDPSDLVNSLST-NPEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~h--K~l~~p~g~g~l~v~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~ 159 (310)
|+.+... +. .. .. ...|++++|+| |+++.|..+|+++.+++......... ...... .+....
T Consensus 187 ~~~g~~~-~~-~~-~~--~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~~~~~g~~~----------~~~~~~ 251 (399)
T 2oga_A 187 QAHGARY-RG-RR-IG--AGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERLRMLRNYGSRQ----------KYSHET 251 (399)
T ss_dssp TCTTCEE-TT-EE-TT--CTTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHHBTTCSS----------TTCCCS
T ss_pred ccccCcc-CC-ee-cc--cccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHHHHHHhcCccc----------cccccc
Confidence 9766432 11 11 11 12689999985 99876544555555545443222110 000000 000000
Q ss_pred eccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC-ceEE--EEEEcCCcchhhhhhhhc
Q 046506 160 ITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH-FAVV--CFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~-~~~v--~~~~~~~~~~~~~~~~~~ 236 (310)
.....+...+..+++...+ +.++++.++..++++++.+.|.++|++++...+. .+.+ .|.+...+
T Consensus 252 ~g~~~~~~~~~~a~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------- 319 (399)
T 2oga_A 252 KGTNSRLDEMQAAVLRIRL--AHLDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRTER---------- 319 (399)
T ss_dssp CCCBCCCCHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEECSS----------
T ss_pred cccCCCcCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCcceeEEEEEECCC----------
Confidence 0111123344444433322 4456677888889999999999988887654332 2211 24333211
Q ss_pred cccchhHHHHHHHHHHHHHHHHhcCcEEEEEeE-E----------C------------CEeEEEEEccCCCCCHHHHHHH
Q 046506 237 NSLLSEEERINEFNRELLESINASGKAYMTHAV-L----------G------------GIYAIRFAAGATLTEERHVMVA 293 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~----------~------------~~~~iRis~~~~~~t~edi~~l 293 (310)
..++.+.|.+.|........ . + ....+|+++. +++|++|++++
T Consensus 320 -------------~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~-~~~t~edi~~~ 385 (399)
T 2oga_A 320 -------------RDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIG-PHLERPQALRV 385 (399)
T ss_dssp -------------HHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCS-TTCCHHHHHHH
T ss_pred -------------HHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCC-CCCCHHHHHHH
Confidence 13566777777753322110 0 0 0268999955 68999999999
Q ss_pred HHHHHHHHHHH
Q 046506 294 WTVVQEHLEAL 304 (310)
Q Consensus 294 i~~l~~~~~~~ 304 (310)
+++|++++.++
T Consensus 386 ~~~l~~~~~~l 396 (399)
T 2oga_A 386 IDAVREWAERV 396 (399)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHHHHh
Confidence 99999987654
No 102
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.74 E-value=1.1e-17 Score=153.14 Aligned_cols=246 Identities=13% Similarity=0.077 Sum_probs=154.3
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|+. ++.+|.++.+.+.+|+++|+++|++. +.+|++++++|++|.+.| +++|+++|++||+++++
T Consensus 128 ~~~~g~~---~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~ 198 (389)
T 1gd9_A 128 VILAGGK---PVEVPTYEEDEFRLNVDELKKYVTDK------TRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVIS 198 (389)
T ss_dssp HHHHTCE---EEEEECCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHCCCE---EEEeccCCccCCCCCHHHHHHhcCcC------ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 3456766 88999875323679999999999653 457778888999999875 99999999999999999
Q ss_pred ecccccccccChhhhhh--hcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 80 DAAYAGSACICPEFRHF--IDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~--~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
|++|+.+.......... ..+..+.|+++.|+||+++.| ..+|+++++ +..+....... .+....
T Consensus 199 De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~-~~~~~~----------- 265 (389)
T 1gd9_A 199 DEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAP-SWIIERMVKFQ-MYNATC----------- 265 (389)
T ss_dssp ECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECC-HHHHHHHHHHH-TTTTCS-----------
T ss_pred ehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEEC-HHHHHHHHHHH-hhhccC-----------
Confidence 99998765432101111 111224689999999998644 236888765 43332221110 000000
Q ss_pred CceeccCCCcchHHHHHHHHHhCHH--HHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhh
Q 046506 157 DWQITLSRRFRSLKLWFVLRNYGVA--NLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~ 234 (310)
.-......+.++++. +.. +++++.++..++++++.+.|+++ ++++..+.....+.+.+.....
T Consensus 266 ------~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~------- 330 (389)
T 1gd9_A 266 ------PVTFIQYAAAKALKD-ERSWKAVEEMRKEYDRRRKLVWKRLNEM-GLPTVKPKGAFYIFPRIRDTGL------- 330 (389)
T ss_dssp ------CCHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCBTTEECCBCGGGTC-------
T ss_pred ------CCHHHHHHHHHHHhC-CCcchHHHHHHHHHHHHHHHHHHHHHHc-CCeecCCCeeeEEEEeccCCCC-------
Confidence 000112222233322 233 67888889999999999999987 7776643323334444432000
Q ss_pred hccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEe-EE--CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESIN-ASGKAYMTHA-VL--GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~-~~--~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+ ..++.+.|. +.|. .+.+. .. .+.+++|+|++ +++++++.+++.|++.+++
T Consensus 331 -------~-------~~~~~~~l~~~~gi-~v~~g~~~~~~~~~~iRi~~~---~~~~~i~~~l~~l~~~~~~ 385 (389)
T 1gd9_A 331 -------T-------SKKFSELMLKEARV-AVVPGSAFGKAGEGYVRISYA---TAYEKLEEAMDRMERVLKE 385 (389)
T ss_dssp -------C-------HHHHHHHHHHHTCE-ECEEGGGGCGGGTTBEEEECC---SCHHHHHHHHHHHHHHHHH
T ss_pred -------C-------HHHHHHHHHHhCCE-EEeCchhhCCCCCCeEEEEec---CCHHHHHHHHHHHHHHHHh
Confidence 0 135667776 5664 44432 11 13568999965 2799999999999988755
No 103
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.74 E-value=5.3e-17 Score=149.28 Aligned_cols=226 Identities=12% Similarity=0.083 Sum_probs=147.3
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
...|+. ++++|.+ |+++|+++|+++ +.+|++..++|++|.+.|+++|+++|++||+++|+|++|
T Consensus 127 ~~~g~~---~~~v~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~ 190 (392)
T 3qhx_A 127 TGWNVE---YTPVALA-------DLDAVRAAIRPT------TRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTF 190 (392)
T ss_dssp GGGTCE---EEEECTT-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTT
T ss_pred HhcCcE---EEEeCCC-------CHHHHHHhhCCC------CeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCC
Confidence 345665 7777663 789999999764 458888999999999999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceec
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
+.+....+. . .++|+++.|+||+++++.+ +|+++.+++.......... ..
T Consensus 191 ~~~~~~~~~------~-~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~---------------------~~ 242 (392)
T 3qhx_A 191 ASPALQQPL------S-LGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQ---------------------NG 242 (392)
T ss_dssp TCTTTCCGG------G-GTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHH---------------------HH
T ss_pred cccccCChH------H-hCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHH---------------------Hh
Confidence 765332221 1 1589999999999987643 6777766554432221100 00
Q ss_pred cCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC-----------------ceEEEEEEcC
Q 046506 162 LSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH-----------------FAVVCFRVSP 224 (310)
Q Consensus 162 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~-----------------~~~v~~~~~~ 224 (310)
.+.....+..|.+++.+ +.+..++++..++++++.+.|++.|++..+..|. .++++|.+.+
T Consensus 243 ~g~~~~~~~~~~~~~~l--~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~ 320 (392)
T 3qhx_A 243 AGAVPGPFDAYLTMRGL--KTLVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRA 320 (392)
T ss_dssp HCCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETT
T ss_pred cCCCCCHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCC
Confidence 11122344455554433 3466778888999999999999988885443221 4578888876
Q ss_pred CcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcC------cE---EEEEeEE-----------CCEeEEEEEccCCC
Q 046506 225 SAVMDKLKTKYENSLLSEEERINEFNRELLESINASG------KA---YMTHAVL-----------GGIYAIRFAAGATL 284 (310)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g------~~---~~~~~~~-----------~~~~~iRis~~~~~ 284 (310)
. ......+.+.+...+ .. .+.+... -..+.||+|+. ..
T Consensus 321 ~---------------------~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg-~e 378 (392)
T 3qhx_A 321 G---------------------RTAAEQLCAKTNIFILAESLGSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVG-IE 378 (392)
T ss_dssp C---------------------HHHHHHHHHHCSSSEECSCCCCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECC-SS
T ss_pred c---------------------HHHHHHHHHhCCCceECCCCCCCCceeeCcccccccccCHHHcCCCCCeEEEEec-cC
Confidence 3 112234444443322 11 1111100 12467999977 57
Q ss_pred CCHHHHHHHHHHH
Q 046506 285 TEERHVMVAWTVV 297 (310)
Q Consensus 285 ~t~edi~~li~~l 297 (310)
+++++|+.+.++|
T Consensus 379 ~~~~~i~~l~~al 391 (392)
T 3qhx_A 379 DVADLLDDLKQAL 391 (392)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh
Confidence 8888888887776
No 104
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.74 E-value=3.7e-17 Score=150.24 Aligned_cols=266 Identities=12% Similarity=0.074 Sum_probs=152.7
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
...|.. ++.+|+++ ++.+|+++|+++|++.. ..+.+|++++ ++|...|+++|+++|+++|+++++|++|
T Consensus 90 ~~~g~~---~~~v~~~~--~~~~d~~~l~~~i~~~~---~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~ 158 (394)
T 1o69_A 90 CYLKAK---PVFIDCDE--TYNIDVDLLKLAIKECE---KKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAE 158 (394)
T ss_dssp HHTTCE---EEEECBCT--TSSBCHHHHHHHHHHCS---SCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTT
T ss_pred HHcCCE---EEEEEeCC--CCCcCHHHHHHHHhccc---CCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcC
Confidence 345665 88999884 46899999999997621 0133566554 6899999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccC
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLS 163 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 163 (310)
+.+....... ...+..+|+++++.||+++ |.++|+++++++..+.........+.. .. ..... .+.+
T Consensus 159 ~~g~~~~~~~---~~~~~~~~~~s~s~~K~l~-~~~~G~~~~~~~~l~~~l~~~~~~~~~-~~----~~~~~----~~~g 225 (394)
T 1o69_A 159 ALGSFYKNKA---LGTFGEFGVYSYNGNKIIT-TSGGGMLIGKNKEKIEKARFYSTQARE-NC----LHYEH----LDYG 225 (394)
T ss_dssp CTTCEETTEE---TTSSSSEEEEECCTTSSSC-CSSCEEEEESCHHHHHHHHHHTBTCCC-SS----SSCCC----SSCC
T ss_pred cccceeCCcc---cccccCcEEEEEeCCccCC-CCCceEEEECCHHHHHHHHHHHHhccc-cC----ccccc----cccC
Confidence 8554432211 1112358899999999876 668899888666544333211111100 00 00000 1112
Q ss_pred CCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC-----CceEEEEEEcCCcc----hhh-hhh
Q 046506 164 RRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR-----HFAVVCFRVSPSAV----MDK-LKT 233 (310)
Q Consensus 164 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----~~~~v~~~~~~~~~----~~~-~~~ 233 (310)
.++....+.+++.....+.+++..++..++++++.+.|.++ +++..++ ...++++.+.+... ... -..
T Consensus 226 ~~~~~~~~~aa~~l~~l~~l~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 303 (394)
T 1o69_A 226 YNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKEFLGEY--FSFLDELENSRSNRWLSTALINFDKNELNACQKDINI 303 (394)
T ss_dssp CBCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT--EECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEEC
T ss_pred cccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--ccccCCCCCCcceeEEEEEEecchhhccccccccccc
Confidence 22222222222221113456778899999999999999886 6665432 12256676653200 000 000
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEe-------EECC----E---------eEEEEEccCCCCCHHHHHHH
Q 046506 234 KYENSLLSEEERINEFNRELLESINASGKAYMTHA-------VLGG----I---------YAIRFAAGATLTEERHVMVA 293 (310)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-------~~~~----~---------~~iRis~~~~~~t~edi~~l 293 (310)
.+.... . .....++.+.|.+.|....... .+.. . ..+|+.. ++++|++||+++
T Consensus 304 ~~~~~~-~-----~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~edi~~~ 376 (394)
T 1o69_A 304 SQKNIT-L-----HPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPS-GTAMSKDDVYEI 376 (394)
T ss_dssp CCCCCC-C-----CHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECC-CTTCCHHHHHHH
T ss_pred cccccc-c-----ccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccC-CCCCCHHHHHHH
Confidence 000000 0 0012456777777765322210 0011 1 3456663 578999999999
Q ss_pred HHHHHHHHH
Q 046506 294 WTVVQEHLE 302 (310)
Q Consensus 294 i~~l~~~~~ 302 (310)
+++|+++..
T Consensus 377 ~~~l~~~~~ 385 (394)
T 1o69_A 377 SKLILKSIK 385 (394)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 999998753
No 105
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.74 E-value=4.5e-18 Score=159.06 Aligned_cols=234 Identities=12% Similarity=0.043 Sum_probs=144.8
Q ss_pred ceecCCCCCCEEEEec--CCCC--CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEE
Q 046506 3 AQIVGIDVKNFRAIKT--TKSS--SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVH 78 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~--~~~~--~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~ 78 (310)
+...|.. ++++++ +++- .+.+|+++| +.+. +.++++++ +|.+|.+.|+++|+++|++||++++
T Consensus 113 ~~~~G~~---~~~v~~~~~~~~~~~~~~d~~~l---~~~~------~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~li 179 (446)
T 2x3l_A 113 LDISQQE---GHFIETHQSPLTNHYNKVNLSRL---NNDG------HKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVL 179 (446)
T ss_dssp HHHHTCC---EEECEEEECTTTSSEEEEEC----------------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEE
T ss_pred HHHcCCe---EEEEeCeeccccCcCCCCCHHHH---cCCC------ceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEE
Confidence 3446776 888888 5320 046888887 3322 44777777 6669999999999999999999999
Q ss_pred eecccccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchh-HHhhhccCCccccccccccccccCCCC
Q 046506 79 VDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSD-LVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 79 vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~-~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
+|+||+. .+.+......... .++|+++.|+||+++++.|+|+++++++.. ..+ +.....
T Consensus 180 vDea~~~-~~~f~~~~~~~~~-~g~Di~~~S~~K~l~~~~g~g~l~~~~~~i~~~~-~~~~~~----------------- 239 (446)
T 2x3l_A 180 IDEAHGA-HFGLQGFPDSTLN-YQADYVVQSFHKTLPALTMGSVLYIHKNAPYREN-IIEYLS----------------- 239 (446)
T ss_dssp EECTTCT-TTTSTTSCCCGGG-GTCSEEEECHHHHSSSCTTCEEEEEETTCTTHHH-HHHHHH-----------------
T ss_pred Ecchhhh-hhccCCCCCChHH-cCCCEEEECCccccccccccEEEEEcCCcCCHHH-HHHHHH-----------------
Confidence 9999987 3322110000111 148999999999999999999999977631 111 100000
Q ss_pred ceeccCCC-c-chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhh
Q 046506 158 WQITLSRR-F-RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 158 ~~~~~~~~-~-~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
.++.+.+ + ..+++.++++.+...+.+++.++..++++++++. +++++.+.....+.+.+.+.+
T Consensus 240 -~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~-----g~~~~~~~~~~~l~i~~~~~~--------- 304 (446)
T 2x3l_A 240 -YFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK-----GFEMLQVDDPLKLLIKYEGFT--------- 304 (446)
T ss_dssp -HHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-----TCEEEECSSTTEEEEECTTSC---------
T ss_pred -HHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc-----CCEECcCCCCeEEEEEeCCcC---------
Confidence 0011111 1 1233444555554444455778888888888887 677765433335666654321
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
..++.+.|.++|. .+... +...+|++++ .++|++++ +++++|+++.+.+
T Consensus 305 --------------~~~l~~~L~~~GI-~v~~~---g~~~iRi~~~-~~~t~e~i-~l~~aL~~~~~~~ 353 (446)
T 2x3l_A 305 --------------GHDIQNWFMNAHI-YLELA---DDYQALAILP-LWHHDDTY-LFDSLLRKIEDMI 353 (446)
T ss_dssp --------------HHHHHHHHHHTTE-EESEE---CSSCEEEECC-CCCTTCCC-CHHHHHHHHHTCC
T ss_pred --------------HHHHHHHHHHCCC-EEEec---CCCEEEEEee-cCCCHHHH-HHHHHHHHHHHhh
Confidence 1356777777764 43311 3468999966 57899999 9999999887543
No 106
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.74 E-value=9.4e-18 Score=150.29 Aligned_cols=103 Identities=16% Similarity=0.175 Sum_probs=81.0
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHH-hCcEEEeecccc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQ-FGIWVHVDAAYA 84 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~-~g~~l~vD~a~~ 84 (310)
.|+. ++++|. +|+++|+++|++. +.+|++++++|++|.+.|+++|+++|++ +|+++++|++|+
T Consensus 61 ~g~~---~~~~~~-------~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~ 124 (331)
T 1pff_A 61 FGVE---VDFIDM-------AVPGNIEKHLKPN------TRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFA 124 (331)
T ss_dssp TTCE---EEEECT-------TSTTHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTT
T ss_pred cCCE---EEEeCC-------CCHHHHHHhhcCC------CeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCc
Confidence 4554 666654 4678899988643 4588889999999999999999999999 999999999998
Q ss_pred cccccChhhhhhhcCCCCCCeeeeecccccccccc--eEEEEEeCchhH
Q 046506 85 GSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDL 131 (310)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~ 131 (310)
.+....+. . .++|+++.|+||++++|.+ +|++++++++.+
T Consensus 125 ~~~~~~~~------~-~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~ 166 (331)
T 1pff_A 125 SPILTNPL------D-LGVDIVVHSATKYINGHTDVVAGLVCSRADIIA 166 (331)
T ss_dssp HHHHCCGG------G-GTCSEEEEETTTTTSSSSSCCCEEEEECHHHHH
T ss_pred ccccCChh------h-cCCcEEEEECccccCCCCCceEEEEEeCcHHHH
Confidence 77653322 1 1489999999999999877 678877653444
No 107
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.74 E-value=1.6e-17 Score=152.91 Aligned_cols=250 Identities=13% Similarity=0.105 Sum_probs=153.9
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEE-EEeccCCcccccCChH---HHHHHHHHhCcEEEe
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFL-CATIGTTAITAVDTLK---PLCDVAKQFGIWVHV 79 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v-~~~~~~~~~G~~~pl~---~I~~l~~~~g~~l~v 79 (310)
+..|.. ++.+|.+++ .+|+++|+++|++....+..+.+| ++.+++|++|.+.|++ +|+++|++||+++++
T Consensus 140 ~~~g~~---~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 213 (407)
T 2zc0_A 140 EQLGAK---IEGVPVDND---GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIE 213 (407)
T ss_dssp HTTTCE---EEEEEEETT---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHcCCE---EEEcccCCC---CCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 445665 889998863 399999999997422121124455 4667789999999987 999999999999999
Q ss_pred ecccccccccChhhhhhhcCC--CCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 80 DAAYAGSACICPEFRHFIDGV--EGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~--~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
|++|+.+......... ...+ .+.+++..+++|+++ | ..+|+++++ +............+..
T Consensus 214 De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~-~~~~~~~~~~~~~~~~------------- 277 (407)
T 2zc0_A 214 DTAYNFMRYEGGDIVP-LKALDNEGRVIVAGTLSKVLG-TGFRIGWIIAE-GEILKKVLMQKQPIDF------------- 277 (407)
T ss_dssp ECTTTTSBSSCSSCCC-GGGGCSSCCEEEEEESTTTTC-TTSCCEEEECC-HHHHHHHHHHHTTTTS-------------
T ss_pred ECCCcccccCCCCCCC-hhhcCCCCCEEEEcccccccC-CCcceEEEecC-HHHHHHHHHHHHhhcC-------------
Confidence 9999876543211110 1111 123467788999998 5 247888765 4333222111100000
Q ss_pred CceeccCCCcchHHHHHHHHHhC-H-HHHHHHHHHHHHHHHHHHHHHcC-CCCeEEecCCCceEEEEEEcCCcchhhhhh
Q 046506 157 DWQITLSRRFRSLKLWFVLRNYG-V-ANLRHFLRSHVNMAKLFERLVGS-DKRFEVVFPRHFAVVCFRVSPSAVMDKLKT 233 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~a~~l~~~L~~-~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~ 233 (310)
..+ ......+.++++... . ..++++.++..++.+++.+.|++ .|++++..+....++.+.+....
T Consensus 278 ----~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~------- 345 (407)
T 2zc0_A 278 ----CAP-AISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFFLPEGA------- 345 (407)
T ss_dssp ----SSC-HHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSBSSEEEEECSTTC-------
T ss_pred ----CCC-HHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCcEEEEEEcCCCC-------
Confidence 000 011222233333211 2 34566777888889999999976 57777654444556667664310
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHhc-CcEEEEEeE-E----CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 234 KYENSLLSEEERINEFNRELLESINAS-GKAYMTHAV-L----GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~-~----~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
+ ..++.+.|.++ |. .+.+.. . .+.+++|+|+.. . ++++++.++++|+++++++.
T Consensus 346 --------~-------~~~l~~~l~~~~gi-~v~~g~~~~~~~~~~~~iRis~~~-~-~~~~i~~~~~~l~~~l~~~~ 405 (407)
T 2zc0_A 346 --------D-------GISFANELMEREGV-VVVPGKPFYTDESGKNAIRLNFSR-P-SKEEIPIGIKKLAKLYKEKF 405 (407)
T ss_dssp --------C-------HHHHHHHHHHHTCE-ECBCSGGGCSSSCCTTEEEEECSS-S-CTTHHHHHHHHHHHHHHHHC
T ss_pred --------C-------HHHHHHHHHHhCCe-EEECchhccCCCCCCCeEEEEeCC-C-CHHHHHHHHHHHHHHHHHHh
Confidence 0 13567777777 64 443321 1 134789999764 3 78999999999999887653
No 108
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.74 E-value=5.6e-17 Score=147.12 Aligned_cols=232 Identities=11% Similarity=0.068 Sum_probs=153.6
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHH--HhCcEEEee
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAK--QFGIWVHVD 80 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~--~~g~~l~vD 80 (310)
++..|.. ++.+|.++ .++ +|+++|++++++. +.+|++++++|++|.+.|++++.++|+ ++|+++++|
T Consensus 123 ~~~~g~~---~~~v~~~~-~~~-~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~D 191 (365)
T 3get_A 123 AKQCGAK---CYKTQSIT-HNL-DEFKKLYETHKDE------IKLIFLCLPNNPLGECLDASEATEFIKGVNEDCLVVID 191 (365)
T ss_dssp HHHHTCE---EEECSSSS-CCH-HHHHHHHHHTTTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTSCTTSEEEEE
T ss_pred HHHcCCE---EEEEecCC-CCC-CCHHHHHHHhCCC------CCEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEe
Confidence 3445666 88888832 357 9999999999743 557888889999999999999888888 779999999
Q ss_pred cccccccc--c----ChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCcccccccccccccc
Q 046506 81 AAYAGSAC--I----CPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVV 153 (310)
Q Consensus 81 ~a~~~~~~--~----~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~ 153 (310)
++|+.+.+ . .+.... .. ....++++.|+||+++.| ..+|++++ +++...........+- .
T Consensus 192 e~~~~~~~~~~~~~~~~~~~~-~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~--~-------- 258 (365)
T 3get_A 192 AAYNEFASFKDSKKHLEPCEL-IK-EFDNVLYLGTFSKLYGLGGLRIGYGIA-NANIISAFYKLRAPFN--V-------- 258 (365)
T ss_dssp CTTHHHHHHHCGGGCCCHHHH-HH-HCTTEEEEEESSSTTSCTTTCCEEEEE-CHHHHHHHHHHSCTTC--S--------
T ss_pred CccHHHhcccCCcccccHhHH-hc-cCCCEEEEeecchHhcCcchheEEEEc-CHHHHHHHHHhcCCCC--c--------
Confidence 99975542 1 111110 01 113567889999998743 46788877 4544333211111110 0
Q ss_pred CCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhh
Q 046506 154 DYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKT 233 (310)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~ 233 (310)
-......+.++++ ..+++++..++..++++++.+.|.++ ++++. ++..+.+.+.+...+
T Consensus 259 ----------~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~~~~~~~~~~~~~~------- 317 (365)
T 3get_A 259 ----------SNLALKAAVAAMD--DDEFTEKTLENNFSQMELYKEFAKKH-NIKII-DSYTNFITYFFDEKN------- 317 (365)
T ss_dssp ----------CHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEC-CCSSSEEEEECSSSC-------
T ss_pred ----------CHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEC-CCCCeEEEEECCCCC-------
Confidence 0011222233333 23678889999999999999999988 88875 455666666665411
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEe-EECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 234 KYENSLLSEEERINEFNRELLESINASGKAYMTHA-VLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
..++.+.|.++|. .+.+. ... .+++|+|+. +++|+++++++|++++
T Consensus 318 ----------------~~~~~~~l~~~gi-~v~~g~~~~-~~~iRis~~----~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 318 ----------------STDLSEKLLKKGI-IIRNLKSYG-LNAIRITIG----TSYENEKFFTEFDKIL 364 (365)
T ss_dssp ----------------HHHHHHHHHTTTE-ECEECGGGT-CSEEEEECC----CHHHHHHHHHHHHHHH
T ss_pred ----------------HHHHHHHHHHCCE-EEEECccCC-CCEEEEEcC----CHHHHHHHHHHHHHHh
Confidence 1467777777764 44432 222 579999944 7899999999998864
No 109
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.74 E-value=1.2e-17 Score=153.46 Aligned_cols=245 Identities=14% Similarity=0.124 Sum_probs=154.2
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEE-EEeccCCcccccCChH---HHHHHHHHhCcEEEe
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFL-CATIGTTAITAVDTLK---PLCDVAKQFGIWVHV 79 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v-~~~~~~~~~G~~~pl~---~I~~l~~~~g~~l~v 79 (310)
+..|.. ++.+|.+++ .+|+++|+++|++. .+.+| ++.+++|++|.+.|.+ +|+++|++||+++++
T Consensus 133 ~~~g~~---~~~~~~~~~---~~d~~~l~~~l~~~-----~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~ 201 (397)
T 2zyj_A 133 RLQGPR---FLTVPAGEE---GPDLDALEEVLKRE-----RPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVE 201 (397)
T ss_dssp HTTCCE---EEEEEEETT---EECHHHHHHHHHHC-----CCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEE
T ss_pred HHcCCE---EEecCcCCC---CCCHHHHHHHHhhc-----CCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 345665 888998863 39999999999762 13344 5678889999998855 899999999999999
Q ss_pred ecccccccccChh---hhhhhcCC-CCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCC
Q 046506 80 DAAYAGSACICPE---FRHFIDGV-EGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDY 155 (310)
Q Consensus 80 D~a~~~~~~~~~~---~~~~~~~~-~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 155 (310)
|++|+.+...... ........ ..-.++..++||+++....+|+++++ ++.+.........+.
T Consensus 202 De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~------------- 267 (397)
T 2zyj_A 202 DDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLSPGLRVAFAVAH-PEALQKLVQAKQGAD------------- 267 (397)
T ss_dssp ECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTCGGGCCEEEECC-HHHHHHHHHHHHHHH-------------
T ss_pred eCCcccccCCCCCCCchhhhCcccCCCeEEEEecccccccccceeEEEecC-HHHHHHHHHHHHhhc-------------
Confidence 9999875532211 11100000 01237789999999822457888765 433322211100000
Q ss_pred CCceeccCCCcchHHHHHHHHHhC--H-HHHHHHHHHHHHHHHHHHHHHcC-CC-CeEEecCCCceEEEEEEcCCcchhh
Q 046506 156 KDWQITLSRRFRSLKLWFVLRNYG--V-ANLRHFLRSHVNMAKLFERLVGS-DK-RFEVVFPRHFAVVCFRVSPSAVMDK 230 (310)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~--~-~~~~~~~~~~~~~a~~l~~~L~~-~~-~~~v~~~~~~~~v~~~~~~~~~~~~ 230 (310)
.+. ..+...++...+. . +.++++.++..++.+++.+.|++ +| ++++..+....++.+.+....
T Consensus 268 ------~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~~g~~~~~~~~~~~---- 335 (397)
T 2zyj_A 268 ------LHT--PMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKGL---- 335 (397)
T ss_dssp ------SSC--CHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSBSSEEEEECSTTC----
T ss_pred ------CCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccCCccEEEEEEcCCCC----
Confidence 000 1122222333332 2 45677788888899999999986 57 688765555566666664310
Q ss_pred hhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE----CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 231 LKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVL----GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
+ ..++.+.|.++|.....+... .+.+++|+|+.. .++++++.++++|++++.++.
T Consensus 336 -----------~-------~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~--~~~~~i~~~~~~l~~~l~~~~ 394 (397)
T 2zyj_A 336 -----------S-------AEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYAT--LDREGIAEGVRRLGRALKGLL 394 (397)
T ss_dssp -----------C-------HHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEECSS--SCHHHHHHHHHHHHHHHHHHH
T ss_pred -----------C-------HHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEEcCC--CCHHHHHHHHHHHHHHHHHHH
Confidence 0 145777787786544332222 135789999764 389999999999999887654
No 110
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.74 E-value=3.6e-17 Score=152.63 Aligned_cols=176 Identities=15% Similarity=0.161 Sum_probs=121.4
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+...|+. ++++|.+ |+++|+++|++++ +.+|++.+.+|++|.+.|+++|+++|++||+++++|++
T Consensus 174 ~~~~G~~---v~~v~~~-------d~~~l~~ai~~~t-----v~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a 238 (445)
T 1qgn_A 174 LPKMGIT---ATVIDPA-------DVGALELALNQKK-----VNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGT 238 (445)
T ss_dssp GGGGTCE---EEEECSS-------CHHHHHHHHHHSC-----EEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECT
T ss_pred HHHcCCE---EEEeCCC-------CHHHHHHHhccCC-----CCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECC
Confidence 3445666 7777653 7899999998753 25888999999999999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeeccccccccc--ceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTL--DCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~--g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
|+.+....+ .. .++|+++.|+||+++++. ..|+++.++ +.+..... +...
T Consensus 239 ~~~~~~~~~------~~-~g~Div~~S~sK~~gg~gd~~~G~l~~~~-~l~~~l~~----~~~~---------------- 290 (445)
T 1qgn_A 239 FATPLNQKA------LA-LGADLVLHSATKFLGGHNDVLAGCISGPL-KLVSEIRN----LHHI---------------- 290 (445)
T ss_dssp TTCTTTCCT------TT-TTCSEEEECTTTTTTCSSSCCCEEEEECH-HHHHHHHH----HHHH----------------
T ss_pred CcccccCCc------cc-cCCEEEEECCcccccccccceEEEEEECH-HHHHHHHH----HHHH----------------
Confidence 976643221 11 258999999999988543 277777654 33332211 0000
Q ss_pred ccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCe-EEecC-----C-----------CceEEEEEEc
Q 046506 161 TLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRF-EVVFP-----R-----------HFAVVCFRVS 223 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~-~v~~~-----~-----------~~~~v~~~~~ 223 (310)
.+........|..++ +.+.+..++++..++++++.+.|++.|++ .+..+ | ..++++|.+.
T Consensus 291 -~g~~~~~~~a~~~~~--~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~ 367 (445)
T 1qgn_A 291 -LGGALNPNAAYLIIR--GMKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVD 367 (445)
T ss_dssp -HCCCCCHHHHHHHHH--HGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEES
T ss_pred -hCCCCCHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEEC
Confidence 000112333344433 33556677788888899999999999888 45433 1 3678999887
Q ss_pred C
Q 046506 224 P 224 (310)
Q Consensus 224 ~ 224 (310)
+
T Consensus 368 ~ 368 (445)
T 1qgn_A 368 G 368 (445)
T ss_dssp S
T ss_pred C
Confidence 5
No 111
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.74 E-value=2.3e-16 Score=143.54 Aligned_cols=229 Identities=13% Similarity=0.056 Sum_probs=152.7
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+..|.. ++.+|.++ .+.+|+++|++++++. + +.+|++++++|++|.+.|++++.++|+.+++++++|++|
T Consensus 134 ~~~g~~---~~~v~~~~--~~~~d~~~l~~~i~~~-~----~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~ 203 (369)
T 3cq5_A 134 KGTHTE---FIAVSRGA--DFRIDMDVALEEIRAK-Q----PDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAY 203 (369)
T ss_dssp HHTTCE---EEEEECCT--TSSCCHHHHHHHHHHH-C----CSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTT
T ss_pred HHcCCE---EEEecCCc--CCCCCHHHHHHHhhcc-C----CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCc
Confidence 445665 88898774 3579999999999762 1 447778899999999999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCC-CCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceec
Q 046506 84 AGSACICPEFRHFIDGVEG-ADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~-~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
+.+....+ ....... .+ .+++..++||+++.| ..+|++++++. .+.........|
T Consensus 204 ~~~~~~~~-~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-~~~~l~~~~~~~-------------------- 260 (369)
T 3cq5_A 204 AEFSPSPS-ATTLLEK-YPTKLVVSRTMSKAFDFAGGRLGYFVANPA-FIDAVMLVRLPY-------------------- 260 (369)
T ss_dssp GGGCCSCC-GGGGTTT-CTTTEEEEEESSSTTSCGGGCCEEEEECTH-HHHHHHTTSCTT--------------------
T ss_pred hhhcCCcc-hHHHHhh-CCCCEEEEEechHhcCCcccceEEEEeCHH-HHHHHHHcCCCC--------------------
Confidence 87653211 1111111 12 458889999999744 24688887643 433222111111
Q ss_pred cCCCcchHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccc
Q 046506 162 LSRRFRSLKLWFVLRNY-GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLL 240 (310)
Q Consensus 162 ~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
+ ...+..+++...+ ..+.+++..++..++.+++.+.|++. ++++. ++..+++.+.+...
T Consensus 261 -~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~--------------- 320 (369)
T 3cq5_A 261 -H--LSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEEL-GYAVV-PSESNFVFFGDFSD--------------- 320 (369)
T ss_dssp -C--SCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHHH-TCEEE-CCSSSEEEEECCSS---------------
T ss_pred -C--CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEC-CCCCeEEEEECCCC---------------
Confidence 0 1122222222222 23467788888999999999999874 88876 55666776655411
Q ss_pred hhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 241 SEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 241 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
..++.+.|.+.|. .+.+. ...+++|++++ +++|+++++++|++++
T Consensus 321 ---------~~~l~~~l~~~gi-~v~~~--~~~~~iRis~~----~~~~i~~~~~~l~~~~ 365 (369)
T 3cq5_A 321 ---------QHAAWQAFLDRGV-LIRDV--GIAGHLRTTIG----VPEENDAFLDAAAEII 365 (369)
T ss_dssp ---------HHHHHHHHHHTTE-ECBCC--SCTTEEEEECC----CHHHHHHHHHHHHHHH
T ss_pred ---------HHHHHHHHHHCCE-EEEEC--CCCCeEEEEeC----CHHHHHHHHHHHHHHH
Confidence 1356666766764 44333 22468999954 6899999999998875
No 112
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.74 E-value=3.6e-17 Score=149.73 Aligned_cols=256 Identities=14% Similarity=0.086 Sum_probs=151.6
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|+. ++.+|.+++ .+.+|+++|+++|++. +.+|+++ +++|.+.|+++|.++|++||+++++|++
T Consensus 96 ~~~~g~~---~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~~~---~~~G~~~~~~~i~~l~~~~~~~li~D~a 162 (393)
T 1mdo_A 96 IVLLGAN---PVMVDVDRD-TLMVTPEHIEAAITPQ------TKAIIPV---HYAGAPADLDAIYALGERYGIPVIEDAA 162 (393)
T ss_dssp HHHTTCE---EEEECBCTT-TCCBCHHHHHHHCCTT------EEEECCB---CGGGCCCCHHHHHHHHHHHTCCBCEECT
T ss_pred HHHCCCE---EEEEeccCC-cCCCCHHHHHHhcCCC------ceEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEECc
Confidence 3456776 899999874 3689999999999653 3455543 4689999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecc--cccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAH--KWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~h--K~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
|+.+..... .. . +. .|++++|+| |+++++ .+|+++.+++........... +...... .........+.+
T Consensus 163 ~~~g~~~~~--~~-~-~~--~d~~~~S~~k~K~l~~~-~~g~~~~~~~~~~~~l~~~~~-~~~~~~~-~~~~~~~~~~~~ 233 (393)
T 1mdo_A 163 HATGTSYKG--RH-I-GA--RGTAIFSFHAIKNITCA-EGGIVVTDNPQFADKLRSLKF-HGLGVDA-WDRQSGGRAPQA 233 (393)
T ss_dssp TCTTCEETT--EE-T-TS--SSEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHHHHTB-TTEECC------------CC
T ss_pred cccCCeECC--ee-c-CC--CCeEEEeCCCCCccccc-cceEEEeCCHHHHHHHHHHHh-cCCcccc-hhhhcccccccc
Confidence 986543321 11 1 11 799999999 998764 355665554544332211110 0000000 000000001111
Q ss_pred c---cCC--CcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC------CceEEEEEEcCCcchh
Q 046506 161 T---LSR--RFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR------HFAVVCFRVSPSAVMD 229 (310)
Q Consensus 161 ~---~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~------~~~~v~~~~~~~~~~~ 229 (310)
+ .|. +...+....++. ..+++++..++..++++++.+.|.+++ +++...+ ...++.+.+.+..
T Consensus 234 ~~~~~g~~~~~~~~~~a~~~~--~l~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~--- 307 (393)
T 1mdo_A 234 EVLAPGYKYNLPDLNAAIALA--QLQKLDALNARRAAIAAQYHQAMADLP-FQPLSLPSWEHIHAWHLFIIRVDEAR--- 307 (393)
T ss_dssp EESSCCCBCCCCHHHHHHHHH--HHHTHHHHHHHHHHHHHHHHHHHHTSS-CEECCCCSSCEECCCSCEEEECCHHH---
T ss_pred cccccCccCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCC-cccccCCCCCCCceeEEEEEEecccc---
Confidence 1 111 123333222222 234577888888899999999999885 8775322 2335666664200
Q ss_pred hhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE----------------C-----CEeEEEEEccCCCCCHH
Q 046506 230 KLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVL----------------G-----GIYAIRFAAGATLTEER 288 (310)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----------------~-----~~~~iRis~~~~~~t~e 288 (310)
. .....++.+.|.+.|......... . ....+|+++. +++|++
T Consensus 308 ------------~----~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~-~~~t~~ 370 (393)
T 1mdo_A 308 ------------C----GITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLF-PDMTES 370 (393)
T ss_dssp ------------H----SSCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCC-TTCCHH
T ss_pred ------------c----ccCHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCC-CCCCHH
Confidence 0 000145677777777533221100 0 0237999955 679999
Q ss_pred HHHHHHHHHHHHHHH
Q 046506 289 HVMVAWTVVQEHLEA 303 (310)
Q Consensus 289 di~~li~~l~~~~~~ 303 (310)
|+++++++|++++..
T Consensus 371 ~i~~~~~~l~~~~~~ 385 (393)
T 1mdo_A 371 DFDRVITALHQIAGQ 385 (393)
T ss_dssp HHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999987644
No 113
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.73 E-value=1.2e-16 Score=147.57 Aligned_cols=228 Identities=16% Similarity=0.200 Sum_probs=147.7
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHH-hCcEEEeec
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQ-FGIWVHVDA 81 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~-~g~~l~vD~ 81 (310)
++..|+. ++++|.+ |+++|+++|++. +.+|++.+++|++|.+.|+++|+++|++ ||+++++|+
T Consensus 122 ~~~~g~~---~~~v~~~-------d~~~l~~~i~~~------t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De 185 (404)
T 1e5e_A 122 LTKFGIQ---VDFINTA-------IPGEVKKHMKPN------TKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADN 185 (404)
T ss_dssp HHHTTCE---EEEECTT-------STTHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEEC
T ss_pred HHHcCCE---EEEECCC-------CHHHHHHhcCCC------CcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEEC
Confidence 3445665 7777764 678999998653 4588889999999999999999999999 999999999
Q ss_pred ccccccccChhhhhhhcCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCce
Q 046506 82 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 82 a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 159 (310)
+|+.+....+. .. ++|+++.|+||++++|.+ +|+++++++ .+.+.+.....+....
T Consensus 186 ~~~~~~~~~~~------~~-~~di~~~S~sK~~~~~g~ri~G~~~~~~~-~~~~~l~~~~~~~~g~-------------- 243 (404)
T 1e5e_A 186 TFCSPMITNPV------DF-GVDVVVHSATKYINGHTDVVAGLICGKAD-LLQQIRMVGIKDITGS-------------- 243 (404)
T ss_dssp TTTCTTTCCGG------GG-TCSEEEEETTTTTTCSSCCCCEEEEECHH-HHHHHHHTCCCCCCCC--------------
T ss_pred CCchhhhCCcc------cc-CCEEEEEcCccccCCCCCCeEEEEEECHH-HHHHHHHHHHHhCCCC--------------
Confidence 99876643221 11 589999999999999877 687776654 4431221111111000
Q ss_pred eccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeE-EecC------------C----CceEEEEEE
Q 046506 160 ITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFE-VVFP------------R----HFAVVCFRV 222 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~-v~~~------------~----~~~~v~~~~ 222 (310)
....+..++++..+. .+..++++..++++.+.+.|++.+.+. ++.+ + ..++++|.+
T Consensus 244 -----~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~ 316 (404)
T 1e5e_A 244 -----VISPHDAWLITRGLS--TLNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFIL 316 (404)
T ss_dssp -----CCCHHHHHHHHHHHT--THHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEE
T ss_pred -----CCCHHHHHHHHHhHh--HHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEe
Confidence 012334444444442 345667777888888888888766553 2211 1 267888876
Q ss_pred cCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE-------------------------CC--EeE
Q 046506 223 SPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVL-------------------------GG--IYA 275 (310)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-------------------------~~--~~~ 275 (310)
.+. ..++.+.+.+.+. +..+..+ .+ .+.
T Consensus 317 ~~~------------------------~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~ 371 (404)
T 1e5e_A 317 KSG------------------------FEGAKKLLDNLKL-ITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGM 371 (404)
T ss_dssp TTH------------------------HHHHHHHHHTCSS-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTE
T ss_pred CCC------------------------HHHHHHHHHhCCC-ceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCe
Confidence 531 0123334444443 2222111 12 468
Q ss_pred EEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 276 IRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 276 iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
+|+|+.. |+++.+++.|++++..+.
T Consensus 372 iRis~g~-----e~~~~li~~l~~al~~~~ 396 (404)
T 1e5e_A 372 IRLSVGI-----EDADELIADFKQGLDALL 396 (404)
T ss_dssp EEEECCS-----SCHHHHHHHHHHHHHHHH
T ss_pred EEEEeCC-----CCHHHHHHHHHHHHHHHH
Confidence 9999663 789999999999887654
No 114
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.73 E-value=1e-17 Score=152.90 Aligned_cols=243 Identities=10% Similarity=0.028 Sum_probs=152.9
Q ss_pred ceecCCCCCCEEEEecC--CCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEE
Q 046506 3 AQIVGIDVKNFRAIKTT--KSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWV 77 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~--~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l 77 (310)
++..|.. ++.+|.+ +. ++.+|+++|+++|++. +.+|++++++|++|.+.| +++|+++|++||+++
T Consensus 119 ~~~~g~~---~~~v~~~~~~~-~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~l 188 (381)
T 1v2d_A 119 AFLAGAK---ARLVRLDLTPE-GFRLDLSALEKALTPR------TRALLLNTPMNPTGLVFGERELEAIARLARAHDLFL 188 (381)
T ss_dssp HHHTTCE---EEEEECEEETT-EEECCHHHHHTTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEE
T ss_pred HHHcCCE---EEEEeCCCCCc-cCCcCHHHHHHhcCcC------CEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEE
Confidence 3445665 8899987 32 3689999999998543 557888889999999877 899999999999999
Q ss_pred EeecccccccccChhhhhhhcCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCC
Q 046506 78 HVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDY 155 (310)
Q Consensus 78 ~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 155 (310)
++|++|+.+.. .........-..+.|+++.++||+++.| | +|+++++++ .+....... .+...
T Consensus 189 i~De~~~~~~~-g~~~~~~~~~~~~~~~~~~s~sK~~~~~-G~r~G~~~~~~~-~~~~~~~~~-~~~~~----------- 253 (381)
T 1v2d_A 189 ISDEVYDELYY-GERPRRLREFAPERTFTVGSAGKRLEAT-GYRVGWIVGPKE-FMPRLAGMR-QWTSF----------- 253 (381)
T ss_dssp EEECTTTTCBS-SSCCCCHHHHCTTTEEEEEEHHHHTTCG-GGCCEEEECCTT-THHHHHHHH-HHHTS-----------
T ss_pred EEEcCcccccc-CCCCCCHHHhcCCCEEEEeechhhcCCc-ccceEEEEeCHH-HHHHHHHHH-hhccc-----------
Confidence 99999976543 1111110000235899999999998644 5 788877543 332221100 00000
Q ss_pred CCceeccCCCcchHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhh
Q 046506 156 KDWQITLSRRFRSLKLWFVLRNYG-VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~ 234 (310)
..+ .....++.++++... .++++++.++..++++++.+.|++. ++++..+....++.+.+.+.
T Consensus 254 -----~~~-~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~--------- 317 (381)
T 1v2d_A 254 -----SAP-TPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM-GLRVYVPEGTYFLMAELPGW--------- 317 (381)
T ss_dssp -----SCC-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT-TCCEECCSBSSEEEEECTTC---------
T ss_pred -----CCC-cHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC-CCEecCCCcceEEEEecChH---------
Confidence 000 011223333443221 3567888899999999999999885 88877544344555554331
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE----CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 235 YENSLLSEEERINEFNRELLESINASGKAYMTHAVL----GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
++...+.+.|.....+... .+.+++|+|+.. ++++++.+++.|++++...++
T Consensus 318 -----------------~~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~---~~~~i~~~~~~l~~~l~~~r~ 373 (381)
T 1v2d_A 318 -----------------DAFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK---TEEELHLALERLGRVVNSPRE 373 (381)
T ss_dssp -----------------CHHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS---CHHHHHHHHHHHHHHC-----
T ss_pred -----------------hHHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC---CHHHHHHHHHHHHHHHhhccc
Confidence 1334455666433332211 135689999652 899999999999998876643
No 115
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.73 E-value=3.2e-17 Score=148.84 Aligned_cols=237 Identities=11% Similarity=0.049 Sum_probs=149.4
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD 80 (310)
+..|.. ++.+|.++.+.+.+ ++++.+.+.+. +.++++++++|++|.+.| +++|+++|++||+++++|
T Consensus 116 ~~~g~~---~~~v~~~~~~~~~~-l~~~~~~~~~~------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 185 (364)
T 1lc5_A 116 AQSGCE---IRRWSLREADGWQL-TDAILEALTPD------LDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILD 185 (364)
T ss_dssp HHTTCE---EEEEECCGGGTTCC-CTTHHHHCCTT------CCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHcCCe---EEEEeCCcccccch-hHHHHHhccCC------CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEE
Confidence 345665 88899875322222 35444444221 446777888999999998 999999999999999999
Q ss_pred cccccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCce
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 159 (310)
++|+.+........... ...+.++++.|+||+++.| ..+|++++.+++.+.........+
T Consensus 186 e~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~------------------ 246 (364)
T 1lc5_A 186 EAFIDFIPHETGFIPAL-KDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQMPW------------------ 246 (364)
T ss_dssp CTTGGGSTTCCCSGGGC-TTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHSCTT------------------
T ss_pred CcChhhccCccchhhHh-ccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHHHhCCCC------------------
Confidence 99976543211101111 1124678889999999754 246887734554443221111100
Q ss_pred eccCCCcchHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccc
Q 046506 160 ITLSRRFRSLKLWFVLRNYG-VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENS 238 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 238 (310)
....+..+++...+. .+.+++..++..++.+++.+.|+++|++++. ++..+++.+.+....
T Consensus 247 -----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~g~~~~~~~~~~~------------ 308 (364)
T 1lc5_A 247 -----SVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVY-PGRANYLLLRCERED------------ 308 (364)
T ss_dssp -----CSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEC-CCSSSEEEEEESCTT------------
T ss_pred -----CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCEEC-CCCCeEEEEECCCcH------------
Confidence 012233334444443 2467888888899999999999988899876 456667767664311
Q ss_pred cchhHHHHHHHHHHHHHHHHhcCcEEEEEe-EE--CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 239 LLSEEERINEFNRELLESINASGKAYMTHA-VL--GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~--~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.++.+.|.++|. .+.+. .. .+.+++|+|+. +++|+++++++|+++++.+
T Consensus 309 ------------~~l~~~l~~~gi-~v~~g~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~~~~~ 360 (364)
T 1lc5_A 309 ------------IDLQRRLLTQRI-LIRSCANYPGLDSRYYRVAIR----SAAQNERLLAALRNVLTGI 360 (364)
T ss_dssp ------------CCHHHHHHTTTE-ECEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHHC---
T ss_pred ------------HHHHHHHHHCCc-EEeeCcccCCCCCCEEEEEeC----CHHHHHHHHHHHHHHhhcc
Confidence 246677777764 44432 12 12468999943 5889999999999887654
No 116
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.73 E-value=9.2e-17 Score=149.00 Aligned_cols=253 Identities=9% Similarity=0.027 Sum_probs=156.6
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHc--CCCcEEE-EEeccCCcccccCC---hHHHHHHHHHhCcEE
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEA--GLIPLFL-CATIGTTAITAVDT---LKPLCDVAKQFGIWV 77 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~--~~~~~~v-~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l 77 (310)
+..|.. ++.+|.+++ .+|+++|+++|++.... +..+.+| ++.+++|++|.+.| +++|+++|++||+++
T Consensus 151 ~~~g~~---~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~l 224 (425)
T 1vp4_A 151 RQYLAN---FVVVPLEDD---GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFI 224 (425)
T ss_dssp HTTTCE---EEEEEEETT---EECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEE
T ss_pred HHcCCE---EEEeccCCC---CCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEE
Confidence 345665 889999863 39999999999863210 0124565 56788899999877 568999999999999
Q ss_pred EeecccccccccChh---hhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccC
Q 046506 78 HVDAAYAGSACICPE---FRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVD 154 (310)
Q Consensus 78 ~vD~a~~~~~~~~~~---~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 154 (310)
++|++|+.+...... .... . ....+++..+++|+++....+|+++++ ++.+.........+..
T Consensus 225 i~De~~~~~~~~g~~~~~~~~~-~-~~~~~i~~~s~sK~~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~----------- 290 (425)
T 1vp4_A 225 VEDDPYGALRYEGETVDPIFKI-G-GPERVVLLNTFSKVLAPGLRIGMVAGS-KEFIRKIVQAKQSADL----------- 290 (425)
T ss_dssp EEECSSTTCBCSSCCCCCHHHH-H-CTTTEEEEEESTTTTCGGGCEEEEECC-HHHHHHHHHHHHHHHS-----------
T ss_pred EEECCCccccCCCCCCcCHHHh-C-CCCCEEEEeccccccccccceEEEeeC-HHHHHHHHHHhhhhcC-----------
Confidence 999999865432211 1111 1 113567889999999822236888765 4343222111000000
Q ss_pred CCCceeccCCCcchHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHcC-CC---CeEEecCCCceEEEEEEcCCcchh
Q 046506 155 YKDWQITLSRRFRSLKLWFVLRNYG-VANLRHFLRSHVNMAKLFERLVGS-DK---RFEVVFPRHFAVVCFRVSPSAVMD 229 (310)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~a~~l~~~L~~-~~---~~~v~~~~~~~~v~~~~~~~~~~~ 229 (310)
. .-......+..+++... .+.+++..++..++.+++.+.|.+ .| ++.+..+....++.+.+....
T Consensus 291 ------~-~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~~~--- 360 (425)
T 1vp4_A 291 ------C-SPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGF--- 360 (425)
T ss_dssp ------S-CCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTC---
T ss_pred ------C-CCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCCCC---
Confidence 0 00011222233333221 345677788888899999999976 35 688765545566767665310
Q ss_pred hhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE----CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 230 KLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVL----GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
+ ..++.+.|.++|.....+... .+.+++|+|+.. .++++++.++++|++++.++.
T Consensus 361 ------------~-------~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~--~~~e~i~~~l~~l~~~l~~~~ 419 (425)
T 1vp4_A 361 ------------D-------TWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCL--PPDEKIVEGIKRLREVVLEYG 419 (425)
T ss_dssp ------------C-------TTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSS--SCHHHHHHHHHHHHHHHHHHH
T ss_pred ------------C-------HHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEeCC--CCHHHHHHHHHHHHHHHHHHH
Confidence 0 024566677776443332212 135789999764 389999999999999988775
Q ss_pred hc
Q 046506 306 SA 307 (310)
Q Consensus 306 ~~ 307 (310)
++
T Consensus 420 ~~ 421 (425)
T 1vp4_A 420 KE 421 (425)
T ss_dssp HH
T ss_pred hh
Confidence 43
No 117
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.73 E-value=4.1e-17 Score=150.14 Aligned_cols=229 Identities=16% Similarity=0.204 Sum_probs=142.6
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+..|+. ++.+|.+ |+++|+++|++. +.+|++++++|++|.+.|+++|+++|++||+++++|++|
T Consensus 125 ~~~g~~---~~~v~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~ 188 (398)
T 2rfv_A 125 PKFGIN---VRFVDAA-------KPEEIRAAMRPE------TKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTF 188 (398)
T ss_dssp HHTTCE---EEEECTT-------SHHHHHHHCCTT------EEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTT
T ss_pred HHcCCE---EEEeCCC-------CHHHHHHhcCCC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCC
Confidence 345655 7777663 689999998753 568888999999999999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceec
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
+.+....+. .. ++|+++.|+||++++|.+ +|+++++++ .+...+. .+.... .
T Consensus 189 ~~~~~~~~~------~~-~~di~~~s~sK~~~~~g~~~~G~~~~~~~-~~~~~~~---~~~~~~---------------~ 242 (398)
T 2rfv_A 189 MSPYCQQPL------QL-GADIVVHSVTKYINGHGDVIGGIIVGKQE-FIDQARF---VGLKDI---------------T 242 (398)
T ss_dssp TCTTTCCGG------GG-TCSEEEEETTTTTTCSSCCCCEEEEECHH-HHHHHHH---THHHHT---------------T
T ss_pred cccccCCch------hh-CCcEEEEeCcccccCCCCceEEEEEECHH-HHHHHHH---HHHHhC---------------C
Confidence 866553221 11 489999999999998877 577776644 3331211 011000 0
Q ss_pred cCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeE--------------EecC---CCceEEEEEEcC
Q 046506 162 LSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFE--------------VVFP---RHFAVVCFRVSP 224 (310)
Q Consensus 162 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~--------------v~~~---~~~~~v~~~~~~ 224 (310)
+.....+..++++..+ +.+..++++..++++.+.+.|++.+.+. +..+ ...++++|.+.+
T Consensus 243 -~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~ 319 (398)
T 2rfv_A 243 -GGCMSPFNAWLTLRGV--KTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAG 319 (398)
T ss_dssp -CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETT
T ss_pred -CCCCCHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence 0011223344444333 2234555666777788888887654332 2211 246788887754
Q ss_pred CcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEe----------E------------ECC--EeEEEEEc
Q 046506 225 SAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHA----------V------------LGG--IYAIRFAA 280 (310)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~----------~------------~~~--~~~iRis~ 280 (310)
. ......+.+.+...| +.++.. . ..+ .+.+|+|+
T Consensus 320 ~---------------------~~~~~~l~~~~~~~~-i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~ 377 (398)
T 2rfv_A 320 G---------------------LEAGRRMINSVELCL-LAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSV 377 (398)
T ss_dssp H---------------------HHHHHHHHTTCSSSE-ECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEEC
T ss_pred C---------------------HHHHHHHHHhCCcce-eccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEe
Confidence 1 111122333332222 111110 0 012 47999997
Q ss_pred cCCCCCHHHHHHHHHHHHHH
Q 046506 281 GATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 281 ~~~~~t~edi~~li~~l~~~ 300 (310)
. ..+++++|++++++|+++
T Consensus 378 ~-~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 378 G-LEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp C-SSCHHHHHHHHHHHHHHH
T ss_pred c-CCCHHHHHHHHHHHHHhh
Confidence 7 589999999999999864
No 118
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.72 E-value=3e-16 Score=146.67 Aligned_cols=238 Identities=12% Similarity=-0.014 Sum_probs=146.5
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChh
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPE 92 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~ 92 (310)
++.++.++. .+.+|+++|++++++.+ +.++++..+++.++ .|+++|+++|++||+++++|++|+.+......
T Consensus 160 ~~~~~~~~~-~~~~d~~~l~~~i~~~~-----~~~i~~~~~~~~~~--~~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~ 231 (447)
T 3h7f_A 160 NGFYGVDPA-THLIDMDAVRATALEFR-----PKVIIAGWSAYPRV--LDFAAFRSIADEVGAKLLVDMAHFAGLVAAGL 231 (447)
T ss_dssp EEEECCCTT-TCSCCHHHHHHHHHHHC-----CSEEEEECSSCCSC--CCHHHHHHHHHHHTCEEEEECTTTHHHHHTTS
T ss_pred EEEcCcCcc-cCCcCHHHHHHHHHhcC-----CeEEEEcCCCCCCc--cCHHHHHHHHHHcCCEEEEECCchhhhhcCCC
Confidence 445666643 46899999999997532 33555544555444 49999999999999999999998665432221
Q ss_pred hhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC-cchHHH
Q 046506 93 FRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKL 171 (310)
Q Consensus 93 ~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 171 (310)
+.. .+.++|+++.++||++++|.| |+++.++ +..........++.. ++.. ....++
T Consensus 232 ~~~---~~~~~di~~~s~sK~l~G~~g-G~i~~~~-~~~~~l~~~~~~~~~------------------~~~~~~~~~a~ 288 (447)
T 3h7f_A 232 HPS---PVPHADVVSTTVHKTLGGGRS-GLIVGKQ-QYAKAINSAVFPGQQ------------------GGPLMHVIAGK 288 (447)
T ss_dssp SCC---STTTCSEEEEESSGGGCCCSC-EEEEECG-GGHHHHHHHHTTTTC------------------SSCCHHHHHHH
T ss_pred CCC---CCCCCcEEEecCCcCCCCCCe-EEEEECH-HHHHHHhhhcCCccc------------------CCccHHHHHHH
Confidence 111 123589999999999998877 7776554 332221111001110 1101 123444
Q ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCC----CCeEEecC-CCceEEEEEEcCCcchhhhhhhhccccchhHHHH
Q 046506 172 WFVLRNYGVANLRHFLRSHVNMAKLFERLVGSD----KRFEVVFP-RHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERI 246 (310)
Q Consensus 172 ~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~----~~~~v~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (310)
.+++.....++++++.++..++++++.+.|.+. +|++++.+ ...+.+.+.+.+... +
T Consensus 289 ~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--------------~---- 350 (447)
T 3h7f_A 289 AVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPL--------------D---- 350 (447)
T ss_dssp HHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSSC--------------C----
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCCC--------------C----
Confidence 455555555678899999999999999999876 58888753 355666666654311 0
Q ss_pred HHHHHHHHHHHHhcCcEEEE----Ee---EECCEeEEEEEccCC---CCCHHHHHHHHHHHHHHHHH
Q 046506 247 NEFNRELLESINASGKAYMT----HA---VLGGIYAIRFAAGAT---LTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 247 ~~~~~~l~~~l~~~g~~~~~----~~---~~~~~~~iRis~~~~---~~t~edi~~li~~l~~~~~~ 303 (310)
...+.+.+.+.|.. +. +. .......+|++.... ..+++|++++++.|++.+..
T Consensus 351 ---~~~~~~~l~~~GI~-v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~ 413 (447)
T 3h7f_A 351 ---GQAAEDLLHEVGIT-VNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALAT 413 (447)
T ss_dssp ---HHHHHHHHHHTTEE-CBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHS
T ss_pred ---HHHHHHHHHHCCeE-EecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 12344445455543 22 11 112346799985421 25789999999999987754
No 119
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.72 E-value=2.8e-17 Score=150.59 Aligned_cols=241 Identities=14% Similarity=0.075 Sum_probs=152.4
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|.. ++.+|.++++.+.+|+++|+++ . +.+|++++++|++|.+.| +++|+++|++||+++++
T Consensus 132 ~~~~g~~---~~~v~~~~~~~~~~d~~~l~~~---~------~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 199 (391)
T 3h14_A 132 LRALGLV---PVDLPTAPENRLQPVPADFAGL---D------LAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFIS 199 (391)
T ss_dssp HHHTTCE---EEEEECCGGGTTSCCHHHHTTS---C------CSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHcCCE---EEEeecCcccCCCCCHHHHHhc---C------CeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 3456776 8999998755567899999887 2 447888899999999988 88999999999999999
Q ss_pred ecccccccccChhhhhhhcCCCCCCeeeeecccccc-cccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCc
Q 046506 80 DAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDW 158 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 158 (310)
|++|+.+...... .. .......++++.+.+|+++ ...++|+++.+++ ...........+.
T Consensus 200 De~~~~~~~~~~~-~~-~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-~~~~~~~~~~~~~---------------- 260 (391)
T 3h14_A 200 DEIYHGIEYEAKA-VT-ALELTDECYVINSFSKYFSMTGWRVGWMVVPED-QVRVVERIAQNMF---------------- 260 (391)
T ss_dssp ECTTTTCBSSSCC-CC-GGGTCSSSEEEEESSSTTCCTTSCCEEEECCGG-GHHHHHHHHHHTT----------------
T ss_pred ECcchhcccCCCC-cC-hhhcCCCEEEEEechhccCCccceeEEEEeCHH-HHHHHHHHHhhhc----------------
Confidence 9999765432211 11 1112235677789999996 4455777776543 3322111000000
Q ss_pred eeccCCC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCc-eEEEEEEcCCcchhhhhhhhc
Q 046506 159 QITLSRR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHF-AVVCFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 159 ~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~-~~v~~~~~~~~~~~~~~~~~~ 236 (310)
.+.+ ....++.+++. ..+.+++..++..++.+++.+.|+++ ++....++.. ..+.+.+.....
T Consensus 261 ---~~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~--------- 325 (391)
T 3h14_A 261 ---ICAPHASQVAALAALD--CDAELQANLDVYKANRKLMLERLPKA-GFTRIAPPDGAFYVYADVSDLTD--------- 325 (391)
T ss_dssp ---CCCCHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHHHHHH-TCCCBCCCCBTTEEEEECTTTCS---------
T ss_pred ---cCCCHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHc-CCCcccCCCeeEEEEEecCccCC---------
Confidence 0000 11122223333 55678889999999999999999887 4443334443 344444543110
Q ss_pred cccchhHHHHHHHHHHHHHHHHhc-CcEEEEEe-EE---CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 237 NSLLSEEERINEFNRELLESINAS-GKAYMTHA-VL---GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~-~~---~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
+ ..++.+.+.++ |. .+.+. .. .+.+++|+|+.. ++++++.+++.|++++++..
T Consensus 326 -----~-------~~~~~~~l~~~~gi-~v~~g~~~~~~~~~~~iRis~~~---~~~~i~~~l~~l~~~~~~~~ 383 (391)
T 3h14_A 326 -----D-------SRAFAAEILEKAGV-AVTPGLDFDPERGAGTLRFSYAR---ATADIEEGLDRLEAFMQARG 383 (391)
T ss_dssp -----C-------HHHHHHHHHHHHCE-ECEEGGGTCTTTGGGEEEEECCS---CHHHHHHHHHHHHHHHHHC-
T ss_pred -----C-------HHHHHHHHHHHCCE-EEcCchhhCCCCCCCeEEEEecC---CHHHHHHHHHHHHHHHHHhc
Confidence 0 13566666665 64 44432 22 236799999653 68999999999999887643
No 120
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.72 E-value=3e-17 Score=152.28 Aligned_cols=254 Identities=11% Similarity=0.010 Sum_probs=155.6
Q ss_pred eecCCCCCCEEEEecCCCC--------CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHH
Q 046506 4 QIVGIDVKNFRAIKTTKSS--------SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQ 72 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~--------~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~ 72 (310)
+..|.. ++.+|.++++ ++.+|+++|+++|++. +.+|++++++|++|.+.| +++|+++|++
T Consensus 143 ~~~g~~---~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~ 213 (429)
T 1yiz_A 143 KAAGGI---PRFIPLKPNKTGGTISSADWVLDNNELEALFNEK------TKMIIINTPHNPLGKVMDRAELEVVANLCKK 213 (429)
T ss_dssp HHTTCE---EEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred HHcCCE---EEEEeCCcccccccccccCcccCHHHHHHHhccC------ceEEEECCCCCCCCccCCHHHHHHHHHHHHH
Confidence 345665 8899988642 4679999999999642 457777888999999986 9999999999
Q ss_pred hCcEEEeecccccccccChhhhhh--hcCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccc
Q 046506 73 FGIWVHVDAAYAGSACICPEFRHF--IDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATE 148 (310)
Q Consensus 73 ~g~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~ 148 (310)
||+++++|++|+.+.......... .....+.|++..++||+++.| | +|+++++ +..+....... .+..
T Consensus 214 ~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~-G~r~G~~~~~-~~~~~~l~~~~-~~~~----- 285 (429)
T 1yiz_A 214 WNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLT-GWKIGWAYGP-EALLKNLQMVH-QNCV----- 285 (429)
T ss_dssp HTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCG-GGCCEEEESC-HHHHHHHHHHH-HTTT-----
T ss_pred cCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCC-CcceEEEEeC-HHHHHHHHHHH-hhcc-----
Confidence 999999999997654322111111 111224788999999998733 5 7888765 43332221100 0000
Q ss_pred cccccCCCCceeccCCCcchHHHHHHHHHh----C--HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEE
Q 046506 149 SKQVVDYKDWQITLSRRFRSLKLWFVLRNY----G--VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRV 222 (310)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~--~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~ 222 (310)
+..+ .....++.++++.. + .+.+++..++..++.+++.+.|.++ ++++..+....++.+.+
T Consensus 286 -----------~~~~-~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~ 352 (429)
T 1yiz_A 286 -----------YTCA-TPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV-GMNPTVPQGGYFMVADW 352 (429)
T ss_dssp -----------CCCC-HHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHH-TCEEEECSBSSEEEEEC
T ss_pred -----------cCCC-hHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccCCCcceEEEEEc
Confidence 0000 01223344445441 3 4467888888999999999999886 78876444455666766
Q ss_pred cCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEe-EEC-------CEeEEEEEccCCCCCHHHHHHH
Q 046506 223 SPSAVMDKLKTKYENSLLSEEERINEFNRELLESIN-ASGKAYMTHA-VLG-------GIYAIRFAAGATLTEERHVMVA 293 (310)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~-~~~-------~~~~iRis~~~~~~t~edi~~l 293 (310)
....... +....... ....++.+.|. +.|. .+.+. .+. +.+++|+|+. +++++|+.+
T Consensus 353 ~~~~~~~-----~~~~~~~~-----~~~~~l~~~l~~~~gv-~v~~g~~f~~~~~~~~~~~~iRis~~---~~~e~i~~~ 418 (429)
T 1yiz_A 353 SSLDSKV-----DLTQETDA-----RKDYRFTKWMTKSVGL-QGIPPSAFYSEPNKHLGEDFVRYCFF---KKDENLQKA 418 (429)
T ss_dssp CSSCTTT-----TCCSSSSS-----CHHHHHHHHHHHHTSE-ECBCGGGGSCGGGGGGTTTEEEEECC---SCHHHHHHH
T ss_pred ccccccc-----cccccccC-----CCHHHHHHHHHHhCCE-EEeCchHhCCCcccCCCCCeEEEEec---CCHHHHHHH
Confidence 5420000 00000000 01135666665 4554 44332 111 2568999965 489999999
Q ss_pred HHHHHHHH
Q 046506 294 WTVVQEHL 301 (310)
Q Consensus 294 i~~l~~~~ 301 (310)
++.|++++
T Consensus 419 l~~l~~~l 426 (429)
T 1yiz_A 419 AEILRKWK 426 (429)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHhc
Confidence 99998764
No 121
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.72 E-value=4.5e-17 Score=146.59 Aligned_cols=240 Identities=16% Similarity=0.141 Sum_probs=140.4
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcc-cccCCh---HHHHHHHHHhCcEEEee
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAI-TAVDTL---KPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~-G~~~pl---~~I~~l~~~~g~~l~vD 80 (310)
..|.. ++.+ .++ .+.+|+++|+++|++.......+.+|++.+.+|++ |.+.|+ ++|+++|++||+++++|
T Consensus 99 ~~g~~---~~~v-~~~--~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D 172 (347)
T 1jg8_A 99 LSGVM---PHPV-PGK--NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHID 172 (347)
T ss_dssp HTCCE---EEEE-CEE--TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred ccCeE---EEEe-cCC--CCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEee
Confidence 34554 7777 443 34789999999986410000125678888889998 998774 68999999999999999
Q ss_pred ccccccccc--ChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCc
Q 046506 81 AAYAGSACI--CPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDW 158 (310)
Q Consensus 81 ~a~~~~~~~--~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ 158 (310)
++|..+... ........ .++|.+++++||++++|. |++++.+++.+++.......+ ..
T Consensus 173 ~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~l~~~~--G~~~~~~~~~~~~~~~~~~~~-~~-------------- 232 (347)
T 1jg8_A 173 GARIFNASIASGVPVKEYA---GYADSVMFCLSKGLCAPV--GSVVVGDRDFIERARKARKML-GG-------------- 232 (347)
T ss_dssp ETTHHHHHHHHCCCHHHHH---HTCSEEEEESSSTTCCSS--CEEEEECHHHHHHHHHHHHHH-TC--------------
T ss_pred hhhhhcchhhcCCChHHhc---ccccEEEEecccccCCCc--eEEEEcCHHHHHHHHHHHHHc-CC--------------
Confidence 998532211 10111111 148999999999998875 444445554443221111000 00
Q ss_pred eeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEe-cCCCceEEEEEEcCCcchhhhhhhhcc
Q 046506 159 QITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVV-FPRHFAVVCFRVSPSAVMDKLKTKYEN 237 (310)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~-~~~~~~~v~~~~~~~~~~~~~~~~~~~ 237 (310)
+.+...+..+.+...+ +...+.+++..++++++.+.|+++ ++++. .++..+++.+.+.....
T Consensus 233 ----~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~---------- 295 (347)
T 1jg8_A 233 ----GMRQAGVLAAAGIIAL--TKMVDRLKEDHENARFLALKLKEI-GYSVNPEDVKTNMVILRTDNLKV---------- 295 (347)
T ss_dssp ----CCSSTHHHHHHHHHHH--HHSSTTHHHHHHHHHHHHHHHHHH-TCBCCGGGCCSSEEEEECTTSSS----------
T ss_pred ----chhHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhc-CceeccCCCcceEEEEEcccccC----------
Confidence 0001111111111111 111112333445677888888776 66653 34566777776652110
Q ss_pred ccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 238 SLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+ ..++.+.|.+.|... .+. +.+.+|+++. ..++++|+++++++|++++++
T Consensus 296 ----~-------~~~~~~~l~~~gi~v-~~~---~~~~iRl~~~-~~~~~e~i~~~~~~l~~~l~~ 345 (347)
T 1jg8_A 296 ----N-------AHGFIEALRNSGVLA-NAV---SDTEIRLVTH-KDVSRNDIEEALNIFEKLFRK 345 (347)
T ss_dssp ----C-------HHHHHHHHHHHTEEC-EEE---ETTEEEEECC-TTSCHHHHHHHHHHHHHHHHH
T ss_pred ----C-------HHHHHHHHHHCCCEE-ecC---CCCeEEEEeC-CCCCHHHHHHHHHHHHHHHHh
Confidence 0 135667776776543 332 1357999965 578999999999999988754
No 122
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.71 E-value=1.3e-16 Score=144.36 Aligned_cols=236 Identities=12% Similarity=0.030 Sum_probs=143.1
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcc-cccCChHHH---HHHHHHhCcEEEeec
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAI-TAVDTLKPL---CDVAKQFGIWVHVDA 81 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~-G~~~pl~~I---~~l~~~~g~~l~vD~ 81 (310)
.|.. ++.+|.+ .+.+|+++|+++ .+. +.+|++...+|.+ |.+.|++++ +++|++||+++|+|+
T Consensus 112 ~g~~---~~~v~~~---~~~~d~~~l~~~-~~~------~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~ 178 (359)
T 3pj0_A 112 QQIT---PLLLGTA---NQLLTIDDIKSL-REP------VSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDG 178 (359)
T ss_dssp HCCE---EEECSCT---TSCCCHHHHHTC-SSC------CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred cCce---EEecCCc---CCCcCHHHHHhc-cCC------ceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEEC
Confidence 4554 7777763 358999999988 222 4467776666665 788776655 999999999999999
Q ss_pred ccccccccCh--hhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCce
Q 046506 82 AYAGSACICP--EFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 82 a~~~~~~~~~--~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 159 (310)
+|..+..... ...... ..+|++++++||++++|.| |++ +.+++.+.........+-....
T Consensus 179 a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~~~~g-g~~-~~~~~l~~~~~~~~~~~~~~~~------------- 240 (359)
T 3pj0_A 179 ARLWEITPFYQKSAEEIC---ALFDSVYVSFYKGIGGIAG-AIL-AGNDDFVQEAKIWKRRYGGDLI------------- 240 (359)
T ss_dssp TTCGGGHHHHTCCHHHHH---TTCSEEEEESSSTTCCSSC-EEE-EECHHHHHHHHHHHHHTTCCCS-------------
T ss_pred cchhcchhhhCCCHHHhh---ccCCEEEEeccccCCCcce-EEE-ECCHHHHHHHHHHHHHhCCCcc-------------
Confidence 9864432111 111111 2589999999999998865 444 4556444332110000000000
Q ss_pred eccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEe-cCCCceEEEEEEcCCcchhhhhhhhccc
Q 046506 160 ITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVV-FPRHFAVVCFRVSPSAVMDKLKTKYENS 238 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 238 (310)
.. ...+.....+++ ...+.+++..++++++.+.|+++|++++. .++..+.+.+++....
T Consensus 241 -~~--~~~~~a~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~------------ 300 (359)
T 3pj0_A 241 -SL--YPYILSADYYFE-----KRIGKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSA------------ 300 (359)
T ss_dssp -CC--HHHHHHHHHHHH-----HHGGGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCH------------
T ss_pred -hh--HHHHHHHHHHHH-----HHHHHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCcc------------
Confidence 00 001111112222 11245566778899999999999999985 4567788888876531
Q ss_pred cchhHHHHHHHHHHHHHHHHhcCcEEEEEe--EECCEeEEEEEccCC--CCCHHHHHHHHHHHHHH
Q 046506 239 LLSEEERINEFNRELLESINASGKAYMTHA--VLGGIYAIRFAAGAT--LTEERHVMVAWTVVQEH 300 (310)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~~~~~~iRis~~~~--~~t~edi~~li~~l~~~ 300 (310)
.....++.+.|.+.|.....+. ...+..++|+++... ..+.++++..++.|.+.
T Consensus 301 --------~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 301 --------DEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp --------HHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred --------chhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 1123467777877775433221 225678999987532 25677788777777653
No 123
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.71 E-value=3e-17 Score=151.50 Aligned_cols=247 Identities=14% Similarity=0.079 Sum_probs=155.3
Q ss_pred eecCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 4 QIVGIDVKNFRAIKTTKS-SSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~-~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
+..|.. ++.+|.+++ +.+.+|+++|+++|++. +.+|++++++|++|.+.| +++|+++|++||+++++
T Consensus 128 ~~~g~~---~~~v~~~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 198 (411)
T 2o0r_A 128 AMAGAH---RVTVPLVPDGRGFALDADALRRAVTPR------TRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVIT 198 (411)
T ss_dssp HHTTCE---EEEEECEEETTEEECCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHcCCE---EEEeeccccccCCCCCHHHHHHhhccC------ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 445665 888998753 23579999999999643 457778888999999877 48999999999999999
Q ss_pred ecccccccccChhhhhh--hcCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCC
Q 046506 80 DAAYAGSACICPEFRHF--IDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDY 155 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~--~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 155 (310)
|++|+.+.......... .....+.|+++.|+||+++.| | +|+++++ +..+....... .+..
T Consensus 199 De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~-~~~~~~l~~~~-~~~~------------ 263 (411)
T 2o0r_A 199 DEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCT-GWKIGWACGP-AELIAGVRAAK-QYLS------------ 263 (411)
T ss_dssp ECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCT-TTCEEEEECC-HHHHHHHHHHH-HHHT------------
T ss_pred EccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCc-cceEEEEeeC-HHHHHHHHHHH-hhcc------------
Confidence 99998665422110010 111124789999999988733 5 7888764 43332221100 0000
Q ss_pred CCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhh
Q 046506 156 KDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
+..+ .....++.++++. +.++++++.++..++.+++.+.|++. ++++..+....++.+.+....
T Consensus 264 ----~~~~-~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~--------- 327 (411)
T 2o0r_A 264 ----YVGG-APFQPAVALALDT-EDAWVAALRNSLRARRDRLAAGLTEI-GFAVHDSYGTYFLCADPRPLG--------- 327 (411)
T ss_dssp ----SCCC-TTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHH-TCEECCCCBSSEEEEECGGGT---------
T ss_pred ----CCCC-hHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHc-CCEecCCCeeEEEEEecCCCC---------
Confidence 0000 1222334445543 35678888999999999999999886 888764333335666664310
Q ss_pred ccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeEE---C----------CEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESIN-ASGKAYMTHAVL---G----------GIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~---~----------~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
..+ ..++.+.+. +.|.....+... . +.+++|+|+. +++++++.+++.|++++
T Consensus 328 ----~~~-------~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~---~~~e~i~~~~~~l~~~~ 393 (411)
T 2o0r_A 328 ----YDD-------STEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFC---KRDDTLDEAIRRLSVLA 393 (411)
T ss_dssp ----CCC-------HHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECC---SCHHHHHHHHHHHGGGG
T ss_pred ----CCC-------HHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEec---CCHHHHHHHHHHHHHHH
Confidence 000 134566665 456433332111 1 3568999964 37999999999998876
Q ss_pred HHH
Q 046506 302 EAL 304 (310)
Q Consensus 302 ~~~ 304 (310)
++.
T Consensus 394 ~~~ 396 (411)
T 2o0r_A 394 ERP 396 (411)
T ss_dssp C--
T ss_pred hcc
Confidence 544
No 124
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.71 E-value=7.3e-17 Score=147.54 Aligned_cols=241 Identities=11% Similarity=0.054 Sum_probs=152.8
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD 80 (310)
+..|.. ++.+|.++. ++.+|+++|+++|++. +.+|++++++|++|.+.| +++|+++|++||+++++|
T Consensus 133 ~~~g~~---~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 202 (386)
T 1u08_A 133 ALSGGI---VKRMALQPP-HFRVDWQEFAALLSER------TRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISD 202 (386)
T ss_dssp HHTTCE---EEEEECCTT-TCCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEE
T ss_pred HHcCCE---EEEeecCcc-cCcCCHHHHHHhhccc------CEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEE
Confidence 445665 889998764 3689999999999542 457778888999999886 689999999999999999
Q ss_pred cccccccccChhhhhhh--cCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 81 AAYAGSACICPEFRHFI--DGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~--~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
++|+.+......+.... .+..+.|+++.++||+++.| ..+|+++++ +..+....... .+...
T Consensus 203 e~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~-~~~~~------------- 267 (386)
T 1u08_A 203 EVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAP-APISAEIRKVH-QYLTF------------- 267 (386)
T ss_dssp CTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECC-HHHHHHHHHHH-HHHTS-------------
T ss_pred ccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcC-HHHHHHHHHHH-Hhhcc-------------
Confidence 99976543221110000 00124789999999998744 227888765 43332221100 00000
Q ss_pred ceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhcc
Q 046506 158 WQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYEN 237 (310)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 237 (310)
..+ .....++..+++.. .++++++.++..++.+++.+.|+++ ++++..+....++.+.+.....
T Consensus 268 ---~~~-~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~---------- 331 (386)
T 1u08_A 268 ---SVN-TPAQLALADMLRAE-PEHYLALPDFYRQKRDILVNALNES-RLEILPCEGTYFLLVDYSAVST---------- 331 (386)
T ss_dssp ---SCC-HHHHHHHHHHHHHC-THHHHTHHHHHHHHHHHHHHHTTSS-SCEECCCCBSSEEEEECTTTCC----------
T ss_pred ---CCC-hHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCceEEEEEecCCCCC----------
Confidence 000 01122333444432 5677888899999999999999987 8887644444566666653100
Q ss_pred ccchhHHHHHHHHHHHHHHHH-hcCcEEEEEe-EE----CCEeEEEEEccCCCCCHHHHHHHHHHHHH
Q 046506 238 SLLSEEERINEFNRELLESIN-ASGKAYMTHA-VL----GGIYAIRFAAGATLTEERHVMVAWTVVQE 299 (310)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~-~~----~~~~~iRis~~~~~~t~edi~~li~~l~~ 299 (310)
.+ ..++.+.+. +.|. .+.+. .+ .+.+++|+|+. +++++|+.+++.|++
T Consensus 332 ---~~-------~~~~~~~l~~~~gi-~v~~g~~f~~~~~~~~~iRis~~---~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 332 ---LD-------DVEFCQWLTQEHGV-AAIPLSVFCADPFPHKLIRLCFA---KKESTLLAAAERLRQ 385 (386)
T ss_dssp ---SC-------HHHHHHHHHHHSCE-ECEEGGGGCSSCCCSCEEEEECC---SCHHHHHHHHHHHTT
T ss_pred ---CC-------HHHHHHHHHHhCCE-EEeCchHhCCCCCCCCEEEEEEc---CCHHHHHHHHHHHhh
Confidence 00 135666665 4564 44432 12 24578999965 479999999998864
No 125
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.71 E-value=6e-17 Score=147.34 Aligned_cols=242 Identities=13% Similarity=0.060 Sum_probs=152.4
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|.. ++.+|.+++ +|+++|+++|++. +.++++++++|++|.+.| +++|+++|++||+++++
T Consensus 122 ~~~~g~~---~~~~~~~~~----~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 188 (377)
T 3fdb_A 122 LSATQRE---GIFIDATGG----INLHDVEKGFQAG------ARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLV 188 (377)
T ss_dssp HHHHTCC---EEEEECTTS----CCHHHHHHHHHTT------CCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHcCCE---EEEccCCCC----CCHHHHHHHhccC------CCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 3456776 999999852 9999999999864 347888889999999876 66777789999999999
Q ss_pred ecccccccccC-hhhhhhhcCC--CCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCC
Q 046506 80 DAAYAGSACIC-PEFRHFIDGV--EGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDY 155 (310)
Q Consensus 80 D~a~~~~~~~~-~~~~~~~~~~--~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 155 (310)
|++|+.+.... ..... ...+ ...+.+..+.+|+++.| ...|++++.++.......... .+...
T Consensus 189 De~~~~~~~~g~~~~~~-~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~-~~~~~----------- 255 (377)
T 3fdb_A 189 DEIHAPLVFDGQHTVAA-GVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLS-PVIKD----------- 255 (377)
T ss_dssp ECTTGGGBSSSCCCCGG-GSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSC-HHHHC-----------
T ss_pred EcccchhhcCCCCCccc-HHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHHHH-HhhcC-----------
Confidence 99998754432 11111 0110 12347788999999644 456777666665433221111 00000
Q ss_pred CCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcC-CCCeEEecCCCceEEEEEEcCCcchhhhhhh
Q 046506 156 KDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGS-DKRFEVVFPRHFAVVCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~-~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~ 234 (310)
+.-......+.++++ .+.+.++++.++..++.+++.+.|++ +|++++..+....++.+.+.....
T Consensus 256 ------~~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 321 (377)
T 3fdb_A 256 ------GASTLGLIAAEAAYR-YGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDFRDTTI------- 321 (377)
T ss_dssp ------CCCHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEECTTSCC-------
T ss_pred ------CCCHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEECcccCC-------
Confidence 000011222233333 23566788899999999999999988 789988744333333455543210
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhc-CcEEEEEeE-EC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 235 YENSLLSEEERINEFNRELLESINAS-GKAYMTHAV-LG--GIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~-~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+ .++.+.+.++ | +.+.+.. .. +.+++|+|++ +++++++.++++|++++++
T Consensus 322 -------~--------~~~~~~l~~~~g-i~v~~g~~~~~~~~~~~Ris~~---~~~e~i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 322 -------E--------GSPSEFFIEKAK-VAMNDGAWFGEDGTGFCRLNFA---TSREVLEEAIDRMAKAVSH 375 (377)
T ss_dssp -------C--------SCHHHHHHHHHC-EECEEGGGGCGGGTTEEEEECC---SCHHHHHHHHHHHHHHHTT
T ss_pred -------C--------HHHHHHHHHhCC-EEecCChhccCCCCCEEEEEeC---CCHHHHHHHHHHHHHHHhh
Confidence 0 1344555555 5 4444321 11 3578999955 4799999999999887643
No 126
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.71 E-value=8.8e-17 Score=145.36 Aligned_cols=231 Identities=10% Similarity=0.023 Sum_probs=140.7
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcc-cccCC---hHHHHHHHHHhCcEEEeecccccccc
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAI-TAVDT---LKPLCDVAKQFGIWVHVDAAYAGSAC 88 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~-G~~~p---l~~I~~l~~~~g~~l~vD~a~~~~~~ 88 (310)
++.+|.+ .+.+|+++|+++.+ +.++++..++|++ |.+.| +++|+++|++||+++|+|+||.....
T Consensus 115 ~~~v~~~---~~~~d~~~l~~~~~--------~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~ 183 (357)
T 3lws_A 115 TILVGAA---DRLMTLDEIKALPD--------IACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEML 183 (357)
T ss_dssp EEECSCT---TSCCCHHHHHTCCS--------CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHH
T ss_pred EEEecCC---CCCcCHHHHhcCcC--------cceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhh
Confidence 6666643 34799999998821 2367777777776 88776 88999999999999999999862211
Q ss_pred c--ChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCc
Q 046506 89 I--CPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRF 166 (310)
Q Consensus 89 ~--~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (310)
. ........ ..+|.++.++||++++|.| |+++ .+++.+.........+..... .. ..
T Consensus 184 ~~~~~~~~~~~---~~~d~~~~s~sK~~~~~~g-g~~~-~~~~~~~~~~~~~~~~~~~~~--------------~~--~~ 242 (357)
T 3lws_A 184 PYYEKTAAEIA---GLFDSIYISFYKGLGGIAG-AILA-GPAAFCQTARIWKRRYGGDLI--------------SL--YP 242 (357)
T ss_dssp HHHTCCHHHHH---TTSSEEEEESSSTTCCSSC-EEEE-ECHHHHHHHHHHHHHTTCCCS--------------CC--HH
T ss_pred hhcCCChHHHH---hcCCEEEEeccccCCCCce-EEEE-cCHHHHHHHHHHHHHhcCCcc--------------cc--hH
Confidence 1 11111111 2479999999999988877 6654 455444332111000000000 00 00
Q ss_pred chHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEe-cCCCceEEEEEEcCCcchhhhhhhhccccchhHHH
Q 046506 167 RSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVV-FPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEER 245 (310)
Q Consensus 167 ~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (310)
.+....++++ .+.+.+++..++++++.+.|+++|++++. .++.++++.+.+....
T Consensus 243 ~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~------------------- 298 (357)
T 3lws_A 243 YIVSADYYYE-----LRKDRMGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQA------------------- 298 (357)
T ss_dssp HHHHHHHHHH-----HHTTCHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCH-------------------
T ss_pred HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCCh-------------------
Confidence 1111112222 13344555678889999999999999984 4667888888876531
Q ss_pred HHHHHHHHHHHHHhcCcEEEEEeEE-CCEeEEEEEccCCC--CCHHHHHHHHHHHHHH
Q 046506 246 INEFNRELLESINASGKAYMTHAVL-GGIYAIRFAAGATL--TEERHVMVAWTVVQEH 300 (310)
Q Consensus 246 ~~~~~~~l~~~l~~~g~~~~~~~~~-~~~~~iRis~~~~~--~t~edi~~li~~l~~~ 300 (310)
.....++.+.|.++|.....+... .+..++|+++...+ .++++++..++.|.+.
T Consensus 299 -~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~a 355 (357)
T 3lws_A 299 -ADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGELDQQTRDAGFARLRQA 355 (357)
T ss_dssp -HHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhhhcCHHHHHHHHHHHHHh
Confidence 111245667777777543222111 45679999976432 5777888877777654
No 127
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.71 E-value=6.5e-17 Score=148.39 Aligned_cols=243 Identities=10% Similarity=0.038 Sum_probs=150.2
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHH------h
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQ------F 73 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~------~ 73 (310)
++..|.. ++.+|.+++ ++.+|+++|++++++. +.+|++++++|++|.+.| +++|+++|++ |
T Consensus 141 ~~~~g~~---~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~ 210 (398)
T 3ele_A 141 VNAAGAR---LVEVPADTE-HFQIDFDALEERINAH------TRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGR 210 (398)
T ss_dssp HHHTTCE---EEEECCCTT-TSSCCHHHHHHTCCTT------EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHcCCE---EEEEecCCc-CCcCCHHHHHHHhCcC------CCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCC
Confidence 3456666 899999864 4689999999999653 457788889999999988 7778899999 9
Q ss_pred CcEEEeecccccccccChhhhhhhcCCCCCCeeeeecccccc-cccceEEEEEeCchh----HHhhhccCCccccccccc
Q 046506 74 GIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSD----LVNSLSTNPEYLKNKATE 148 (310)
Q Consensus 74 g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~v~~~~~----~~~~~~~~~~y~~~~~~~ 148 (310)
|+++++|++|+.+......... .......+++..+++|+++ ....+|++++++... +...+.. +....
T Consensus 211 ~~~li~De~~~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~---~~~~~--- 283 (398)
T 3ele_A 211 PIFIIADEPYREIVYDGIKVPF-VTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVCG---AGRAL--- 283 (398)
T ss_dssp CCEEEEECTTTTCBCTTCCCCC-GGGTCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHHH---HHHHT---
T ss_pred CeEEEEeccccccccCCCCcCC-hHhhcCCeEEEEehhhcCCCccceeEEEEEcchhhhHHHHHHHHHH---Hhhhc---
Confidence 9999999999765432211111 1112235688899999997 445688888765521 1111100 00000
Q ss_pred cccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcch
Q 046506 149 SKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVM 228 (310)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~ 228 (310)
+......+..+++...+... ...++..++.+++.+.|+++ ++++..+.....+.+.+...+
T Consensus 284 -------------~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-- 344 (398)
T 3ele_A 284 -------------GYVCAPSLFQKMIVKCQGAT---GDINAYKENRDLLYEGLTRI-GYHCFKPDGAFYMFVKALEDD-- 344 (398)
T ss_dssp -------------TCCCSCHHHHHHHTTCTTCC---CCHHHHHHHHHHHHHHHHHH-TCCEECCSBSSEEEEECSSSC--
T ss_pred -------------cccCCCHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHc-CCeecCCCeeEEEEEEcCCCC--
Confidence 00001112222222222111 13456667788888888776 777764433333555554321
Q ss_pred hhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 229 DKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
..++.+.+.+.|.....+......+++|+|+. +++++|+.++++|++++++++
T Consensus 345 ---------------------~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~e~i~~~l~~l~~~l~~~~ 397 (398)
T 3ele_A 345 ---------------------SNAFCEKAKEEDVLIVAADGFGCPGWVRISYC---VDREMIKHSMPAFEKIYKKYN 397 (398)
T ss_dssp ---------------------HHHHHHHHHTTTEECEESGGGTCTTEEEEECC---SCHHHHHHHHHHHHHHHHHHC
T ss_pred ---------------------HHHHHHHHHHCCEEEeCccccCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHhh
Confidence 13566677777754433332233569999953 689999999999999887653
No 128
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.71 E-value=7.2e-16 Score=143.07 Aligned_cols=244 Identities=11% Similarity=0.042 Sum_probs=153.1
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHH-----hCcEE
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQ-----FGIWV 77 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~-----~g~~l 77 (310)
.|.. ++.+|.++.+ +.+|+++|+++|++.. ..+.++++++++|++|.+.| +++|+++|++ ||+++
T Consensus 158 ~g~~---~~~~~~~~~~-~~~d~~~l~~~l~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~l 230 (430)
T 2x5f_A 158 NGAN---LQTYPIFDKD-GHYTTDSLVEALQSYN---KDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIA 230 (430)
T ss_dssp TCCE---EEEECCBCTT-SCBCSHHHHHHHHHCC---SSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCe---EEEEeccCcc-CCcCHHHHHHHHHhcC---CCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEE
Confidence 5665 8889987632 5799999999997621 12457788888999999998 8999999999 99999
Q ss_pred EeecccccccccChhhhh---hhcCCCCC---Ceeeeecccccccc-cceEEEEE--eCchhHHhhhccCCccccccccc
Q 046506 78 HVDAAYAGSACICPEFRH---FIDGVEGA---DSFSLNAHKWFFTT-LDCCCLWV--KDPSDLVNSLSTNPEYLKNKATE 148 (310)
Q Consensus 78 ~vD~a~~~~~~~~~~~~~---~~~~~~~~---D~~~~~~hK~l~~p-~g~g~l~v--~~~~~~~~~~~~~~~y~~~~~~~ 148 (310)
++|++|+.+......+.. ...+.... +++..++||+++.| ..+|++++ +++..+..............
T Consensus 231 i~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~--- 307 (430)
T 2x5f_A 231 VVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSN--- 307 (430)
T ss_dssp EEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHHHHHHHHHHHHHHTT---
T ss_pred EEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHHHHHHHHHhhhhhcc---
Confidence 999999765443211111 11122234 56789999999755 23688887 24434322211100000000
Q ss_pred cccccCCCCceeccCCCcchHHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHHHc----CCCCeEEecCCCce-EE
Q 046506 149 SKQVVDYKDWQITLSRRFRSLKLWFVLRNYG-----VANLRHFLRSHVNMAKLFERLVG----SDKRFEVVFPRHFA-VV 218 (310)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~a~~l~~~L~----~~~~~~v~~~~~~~-~v 218 (310)
..+ ...+..+++...+. .+.++++.++..++.+++.+.|+ +. ++++.. +..+ .+
T Consensus 308 ------------~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-g~~~~~-~~~g~~~ 371 (430)
T 2x5f_A 308 ------------ISS--GPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHS-HWQAYD-FNSGYFM 371 (430)
T ss_dssp ------------TSS--CCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTT-TEEECC-CCBSSEE
T ss_pred ------------cCC--CChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC-CceeeC-CCceEEE
Confidence 000 11222222222222 12234477888888999999998 54 787764 4444 46
Q ss_pred EEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh-cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHH
Q 046506 219 CFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA-SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVV 297 (310)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l 297 (310)
.+.+.+.+ ..++.+.|.+ .|. .+.+. +.+++|+|++ . +++++++.++++|
T Consensus 372 ~~~~~~~~-----------------------~~~~~~~l~~~~gi-~v~~g---~~~~iRis~~-~-~~~e~i~~~~~~l 422 (430)
T 2x5f_A 372 AIKVHDVD-----------------------PEALRKHLIDKYSI-GVIAL---NATDIRIAFS-C-VEKDDIPHVFDSI 422 (430)
T ss_dssp EEEESSSC-----------------------HHHHHHHHHHHHCE-ECEEC---SSSEEEEEGG-G-SCGGGHHHHHHHH
T ss_pred EeCCCCCC-----------------------HHHHHHHHHHhCCE-EEecC---CCCeEEEEEe-c-CCHHHHHHHHHHH
Confidence 66665211 1356677776 664 44443 4568999966 3 6899999999999
Q ss_pred HHHHHHH
Q 046506 298 QEHLEAL 304 (310)
Q Consensus 298 ~~~~~~~ 304 (310)
++++.++
T Consensus 423 ~~~l~~~ 429 (430)
T 2x5f_A 423 AKAIDDL 429 (430)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9988664
No 129
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.71 E-value=9e-16 Score=145.49 Aligned_cols=271 Identities=12% Similarity=0.086 Sum_probs=157.0
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|.. ++.+++++++++.+|+++|+++|++....+..+.+|++++++|++|.+.+ +++|+++|++||+++++
T Consensus 199 ~~~~g~~---~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~ 275 (500)
T 3tcm_A 199 IALHGGA---LVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLA 275 (500)
T ss_dssp HHHTTCE---EEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHcCCE---EEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 3456666 89999998766799999999999986554444667888899999999866 66777789999999999
Q ss_pred ecccccccccCh----hhhhhhcCC----CCCC-eeeeecccccccc--cceEEEEEe--CchhHHhhhccCCccccccc
Q 046506 80 DAAYAGSACICP----EFRHFIDGV----EGAD-SFSLNAHKWFFTT--LDCCCLWVK--DPSDLVNSLSTNPEYLKNKA 146 (310)
Q Consensus 80 D~a~~~~~~~~~----~~~~~~~~~----~~~D-~~~~~~hK~l~~p--~g~g~l~v~--~~~~~~~~~~~~~~y~~~~~ 146 (310)
|.+|+.+.+... ........+ .... ++..|++|+++++ ..+|++.+. ++..+.........+..
T Consensus 276 Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~~~~--- 352 (500)
T 3tcm_A 276 DEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASVNLC--- 352 (500)
T ss_dssp ECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHHHTTCC---
T ss_pred ecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHHhcccC---
Confidence 999976544211 111100111 1123 3446999998432 235776652 44333222111000000
Q ss_pred cccccccCCCCceeccCCCcchHHHHHHHHH---------hCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceE
Q 046506 147 TESKQVVDYKDWQITLSRRFRSLKLWFVLRN---------YGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAV 217 (310)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---------~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~ 217 (310)
+-......+..++.. .-....+++.++..++++++.+.|.++||+++. +++.++
T Consensus 353 ----------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~-~~~g~~ 415 (500)
T 3tcm_A 353 ----------------SNITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCN-EAEGAM 415 (500)
T ss_dssp ----------------CCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECC-CCCBTT
T ss_pred ----------------CCHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEe-cCCeEE
Confidence 000111122222210 012345677788889999999999999999876 445544
Q ss_pred EEE-EEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeE---ECCEeEEEEEccCCCCCHHHHHHH
Q 046506 218 VCF-RVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAV---LGGIYAIRFAAGATLTEERHVMVA 293 (310)
Q Consensus 218 v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~~~~~iRis~~~~~~t~edi~~l 293 (310)
+.| .+..+.- .....+... . ......+.+.+.+.|++...+.. ..+...+|+|+. +++++++.+
T Consensus 416 ~~~~~~~lp~~--~~~~~~~~g--~-----~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~---~~~e~i~~~ 483 (500)
T 3tcm_A 416 YVFPQICLPQK--AIEAAKAAN--K-----APDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL---PQEDKIPAV 483 (500)
T ss_dssp EECCEECCCHH--HHHHHHHHT--S-----CHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC---SCTTTHHHH
T ss_pred EEeeeecCchh--hHHHHHhcC--C-----CcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC---CCHHHHHHH
Confidence 443 2332100 000000000 0 00001123444456654443221 235678999955 678899999
Q ss_pred HHHHHHHHHHHhhcc
Q 046506 294 WTVVQEHLEALLSAS 308 (310)
Q Consensus 294 i~~l~~~~~~~~~~~ 308 (310)
+++|+++.+++.++.
T Consensus 484 i~~l~~~~~~~~~~~ 498 (500)
T 3tcm_A 484 ISRFTVFHEAFMSEY 498 (500)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999998876543
No 130
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.71 E-value=4.5e-16 Score=145.54 Aligned_cols=253 Identities=11% Similarity=0.064 Sum_probs=155.8
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEE-EEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFL-CATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v-~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
+..|.. ++.+|.+++ .+|+++|+++|+.....+..+.+| ++..++|++|.+.| +++|+++|++||+++++
T Consensus 182 ~~~g~~---~~~v~~~~~---g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~ 255 (448)
T 3aow_A 182 NFYEPQ---YIQIPLDDE---GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVE 255 (448)
T ss_dssp HTTCCE---EEEEEEETT---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHcCCE---EEEeccCCC---CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 345665 889999863 399999999997321111135555 45677899999887 56899999999999999
Q ss_pred ecccccccccChhhhhhh-cCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 80 DAAYAGSACICPEFRHFI-DGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~-~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
|++++.+.+......... ....+.+++..+++|+++ | .-+|+++++ +..+.........+..
T Consensus 256 De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~-~~l~~~l~~~~~~~~~-------------- 319 (448)
T 3aow_A 256 DDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGWMVGD-PGIIRKMEIAKQSTDL-------------- 319 (448)
T ss_dssp ECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCEEEEEC-HHHHHHHHHHHHHHHS--------------
T ss_pred ECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhcc-ccccEEEEEeC-HHHHHHHHHHHHHhcC--------------
Confidence 999987654221110000 011134678889999997 4 237888775 4343322111000000
Q ss_pred ceeccCCCcchHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHcC-CC-CeEEecCCCceEEEEEEcCCcchhhhhhh
Q 046506 158 WQITLSRRFRSLKLWFVLRNYG-VANLRHFLRSHVNMAKLFERLVGS-DK-RFEVVFPRHFAVVCFRVSPSAVMDKLKTK 234 (310)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~a~~l~~~L~~-~~-~~~v~~~~~~~~v~~~~~~~~~~~~~~~~ 234 (310)
+.-.+....+..+++..+ .+.++++.++..++.+++.+.|++ +| ++++..+....++.+.+....
T Consensus 320 ----~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p~~g~~~~v~~~~~~-------- 387 (448)
T 3aow_A 320 ----CTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWVTLPDGI-------- 387 (448)
T ss_dssp ----SCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSBSSEEEEECSTTC--------
T ss_pred ----CCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCCCccEEEEEEcCCCC--------
Confidence 000011222233333211 245667777778889999999986 57 688765545566666664310
Q ss_pred hccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE----CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 235 YENSLLSEEERINEFNRELLESINASGKAYMTHAVL----GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
+ ..++.+.+.++|.....+... .+.+++|+|+.. .++++|+.+++.|++++++..+
T Consensus 388 -------~-------~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~~--~~~e~i~~~~~~L~~~l~~~~~ 447 (448)
T 3aow_A 388 -------D-------SKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTY--VDEDKIMEGIKRLAETIKEELK 447 (448)
T ss_dssp -------C-------HHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSS--SCTHHHHHHHHHHHHHHHHHHC
T ss_pred -------C-------HHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEEeCC--CCHHHHHHHHHHHHHHHHHHHh
Confidence 0 135677777786544433222 235789999663 4889999999999998876644
No 131
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.71 E-value=2.7e-16 Score=145.06 Aligned_cols=158 Identities=15% Similarity=0.119 Sum_probs=107.3
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhC-cEEEeecc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFG-IWVHVDAA 82 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g-~~l~vD~a 82 (310)
+..|+. ++++|.+ |+++|+++|+++ +.+|++.+++|++|.+.|+++|+++|+++| +++++|++
T Consensus 127 ~~~G~~---v~~v~~~-------d~~~l~~~i~~~------t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~ 190 (403)
T 3cog_A 127 SEFGLK---ISFVDCS-------KIKLLEAAITPE------TKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNT 190 (403)
T ss_dssp GGGTCE---EEEECTT-------SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECT
T ss_pred HHcCCE---EEEECCC-------CHHHHHHhcCcC------CeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECC
Confidence 456665 7777764 689999998753 458888999999999999999999999999 99999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
|+.+....+. . .++|+++.|+||++++|.+ +|+++.+++......... ....+
T Consensus 191 ~~~~~~~~~~------~-~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~----~~~~g-------------- 245 (403)
T 3cog_A 191 FMSPYFQRPL------A-LGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFL----QNSLG-------------- 245 (403)
T ss_dssp TTCTTTCCTT------T-TTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHH----HHHHC--------------
T ss_pred CcccccCCcc------c-cCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHH----HHhcC--------------
Confidence 9876532211 1 2589999999999999887 488877665443222110 00000
Q ss_pred ccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCe
Q 046506 161 TLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRF 207 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~ 207 (310)
.....+..|.+++.+ +.+..++++..++++.+.+.|++.+.+
T Consensus 246 ---~~~~~~~~~~~~~~l--~~l~~r~~~~~~n~~~l~~~l~~~~~v 287 (403)
T 3cog_A 246 ---AVPSPIDCYLCNRGL--KTLHVRMEKHFKNGMAVAQFLESNPWV 287 (403)
T ss_dssp ---CCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred ---CCCCHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 001223444444333 345556777777777777777665443
No 132
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.70 E-value=2e-16 Score=146.43 Aligned_cols=227 Identities=11% Similarity=0.091 Sum_probs=145.6
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHH--hCcEEEeecc
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQ--FGIWVHVDAA 82 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~--~g~~l~vD~a 82 (310)
..|+. +++++.+ |+++|+++|+++ +.+|++.+.+|++|.+.|+++|+++|++ +|+++++|++
T Consensus 144 ~~G~~---v~~v~~~-------d~~~le~ai~~~------tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a 207 (415)
T 2fq6_A 144 KLGVT---TSWFDPL-------IGADIVKHLQPN------TKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNT 207 (415)
T ss_dssp GGTCE---EEEECTT-------CGGGGGGGCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECT
T ss_pred HcCcE---EEEECCC-------CHHHHHHhhccC------CcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECC
Confidence 34665 7777543 678999999764 4588889999999999999999999999 9999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
|+.+....+. . .++|+++.|+||+++++.+ .|+++.++. .+....... ..
T Consensus 208 ~a~~~~~~p~------~-~g~Div~~S~sK~lg~~g~~~~G~l~~~~~-~~~~l~~~~-~~------------------- 259 (415)
T 2fq6_A 208 WAAGVLFKAL------D-FGIDVSIQAATKYLVGHSDAMIGTAVCNAR-CWEQLRENA-YL------------------- 259 (415)
T ss_dssp TTTTTSSCGG------G-GTCSEEEEETTTTTTCSSSCCCEEEEECTT-THHHHHHHH-HH-------------------
T ss_pred CcccccCCcc------c-cCCeEEEEeCccccCCCCCceEEEEEeCHH-HHHHHHHHH-Hh-------------------
Confidence 9865332221 1 1589999999999987754 577776544 333221100 00
Q ss_pred ccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEe-cC----------------CCceEEEEEEc
Q 046506 161 TLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVV-FP----------------RHFAVVCFRVS 223 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~-~~----------------~~~~~v~~~~~ 223 (310)
.+........|..++ +.+.+..++++..++++.+++.|.+.|.+.-+ -+ ...++++|.+.
T Consensus 260 -~G~~~~~~~a~~~~~--~l~~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~ 336 (415)
T 2fq6_A 260 -MGQMVDADTAYITSR--GLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLK 336 (415)
T ss_dssp -TTCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEES
T ss_pred -cCCCCCHHHHHHHHh--hhhHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC
Confidence 000112223333333 34567778888899999999999988776532 11 13578899887
Q ss_pred CC-cchhhhhhhhccccchhHHHHHHHHHHHHHHHHh------cCcE---EEE--E---e------EEC-CEeEEEEEcc
Q 046506 224 PS-AVMDKLKTKYENSLLSEEERINEFNRELLESINA------SGKA---YMT--H---A------VLG-GIYAIRFAAG 281 (310)
Q Consensus 224 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------~g~~---~~~--~---~------~~~-~~~~iRis~~ 281 (310)
+. + ......+.+.+.. .|.. ... | + ..+ ..+.||+|+.
T Consensus 337 g~~~--------------------~~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G 396 (415)
T 2fq6_A 337 KKLN--------------------NEELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIG 396 (415)
T ss_dssp SCCC--------------------HHHHHHHHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCTTCCCCCCSCEEEEECC
T ss_pred CCCC--------------------HHHHHHHHHhCCcCeEeccCCCCceeEEecCCCccccccchhhcCCCCCEEEEEec
Confidence 52 1 0111223332211 1211 111 1 0 011 2479999977
Q ss_pred CCCCCHHHHHHHHHHHHH
Q 046506 282 ATLTEERHVMVAWTVVQE 299 (310)
Q Consensus 282 ~~~~t~edi~~li~~l~~ 299 (310)
+.+++++|+.+.++|++
T Consensus 397 -~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 397 -LEDVDDLIADLDAGFAR 413 (415)
T ss_dssp -SSCHHHHHHHHHHHHHT
T ss_pred -CCCHHHHHHHHHHHHHh
Confidence 68999999999999874
No 133
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.70 E-value=3.9e-16 Score=144.69 Aligned_cols=251 Identities=11% Similarity=0.042 Sum_probs=151.7
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+...|+. ++.++++++ ++.+|+++|+++|++. +.+|++++ ++|.+.++++|+++|++||+++++|++
T Consensus 107 ~~~~G~~---~~~v~~~~~-~~~~d~~~l~~~i~~~------~~~v~~~~---~tG~~~~l~~i~~la~~~~~~li~Dea 173 (424)
T 2po3_A 107 LRWIGLT---PVFADIDPD-TGNLDPDQVAAAVTPR------TSAVVGVH---LWGRPCAADQLRKVADEHGLRLYFDAA 173 (424)
T ss_dssp HHHTTCE---EEEECBCTT-TSSBCHHHHGGGCCTT------EEEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECT
T ss_pred HHHcCCE---EEEEecCCC-cCCcCHHHHHHhhCcC------CcEEEEEC---CCCCcCCHHHHHHHHHHcCCEEEEECc
Confidence 3456776 899999863 4689999999998653 44555543 689999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecc--cccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAH--KWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~h--K~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
|+.+..... .. ... ..|+++.|+| |++++ ..+|+++.++++.+....... .+.... .+... ..
T Consensus 174 ~~~g~~~~~--~~-~~~--~~di~~~S~sk~K~l~~-~~~G~~v~~~~~l~~~l~~~~-~~~~~~------~~~~~--~~ 238 (424)
T 2po3_A 174 HALGCAVDG--RP-AGS--LGDAEVFSFHATKAVNA-FEGGAVVTDDADLAARIRALH-NFGFDL------PGGSP--AG 238 (424)
T ss_dssp TCTTCEETT--EE-TTS--SSSEEEEECCTTSSSCC-SSCEEEEESCHHHHHHHHHHH-BTTTTC------TTCCT--TC
T ss_pred cccCCeECC--ee-ccc--ccCEEEEeCCCCCCccC-CCCeEEEeCCHHHHHHHHHHH-hcCccc------ccccc--cc
Confidence 985443211 11 111 2578778876 88765 445666655454433221110 000000 00000 00
Q ss_pred ccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC-----ceEEEEEEcCCcchhhhhhhh
Q 046506 161 TLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH-----FAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~-----~~~v~~~~~~~~~~~~~~~~~ 235 (310)
....+...+..+.++. ..++++++.++..++++++.+.|.++|++++..++. ..++.+.+.+..
T Consensus 239 g~~~~~~~~~aa~~l~--~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~--------- 307 (424)
T 2po3_A 239 GTNAKMSEAAAAMGLT--SLDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEAT--------- 307 (424)
T ss_dssp CCBCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHH---------
T ss_pred CcCCCcCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccccEEEEEEECCcc---------
Confidence 1111233333333333 245678888899999999999999988998875332 134555554200
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEE-C--------------CE-------eEEEEEccCCCCCHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKAYMTHAVL-G--------------GI-------YAIRFAAGATLTEERHVMVA 293 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~--------------~~-------~~iRis~~~~~~t~edi~~l 293 (310)
......++.+.|.+.|. .+.+... . .. ..+|++++ .+++++|++++
T Consensus 308 ----------~~~~~~~l~~~L~~~gI-~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~-~~~t~e~i~~~ 375 (424)
T 2po3_A 308 ----------TGIHRDLVMEVLKAEGV-HTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTG-TAIGDDDIRRV 375 (424)
T ss_dssp ----------HSSCHHHHHHHHHHTTE-ECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCS-TTCCHHHHHHH
T ss_pred ----------chhhHHHHHHHHHHCCC-ceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCC-CCCCHHHHHHH
Confidence 00001356666767764 3332110 0 00 12788744 68999999999
Q ss_pred HHHHHHHHHHH
Q 046506 294 WTVVQEHLEAL 304 (310)
Q Consensus 294 i~~l~~~~~~~ 304 (310)
+++|++++...
T Consensus 376 ~~~L~~~~~~~ 386 (424)
T 2po3_A 376 ADLLRLCATRG 386 (424)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhhh
Confidence 99999888654
No 134
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.70 E-value=1.4e-16 Score=147.18 Aligned_cols=257 Identities=12% Similarity=0.036 Sum_probs=154.6
Q ss_pred eecCCCCCCEEEEecCC----C------CCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccC---ChHHHHHHH
Q 046506 4 QIVGIDVKNFRAIKTTK----S------SSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVD---TLKPLCDVA 70 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~----~------~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~---pl~~I~~l~ 70 (310)
...|.. ++.+|.++ + .++.+|+++|++++++. +.+|++++++|++|.+. ++++|+++|
T Consensus 133 ~~~g~~---~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~nptG~~~~~~~l~~i~~~~ 203 (422)
T 3fvs_A 133 MMAGGR---PVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSR------TKALVLNTPNNPLGKVFSREELELVASLC 203 (422)
T ss_dssp HHTTCE---EEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred HHcCCE---EEEEecccccccccccccccCCCCCHHHHHhhcCCC------ceEEEECCCCCCCCcCCCHHHHHHHHHHH
Confidence 345665 88899875 2 25679999999998653 45788888999999998 499999999
Q ss_pred HHhCcEEEeecccccccccChhhhhhh--cCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCcccccccc
Q 046506 71 KQFGIWVHVDAAYAGSACICPEFRHFI--DGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKAT 147 (310)
Q Consensus 71 ~~~g~~l~vD~a~~~~~~~~~~~~~~~--~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~ 147 (310)
++||+++++|++|+.+........... ......+++..|++|+++.| ..+|+++.+++ .+............
T Consensus 204 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~-~~~~~~~~~~~~~~---- 278 (422)
T 3fvs_A 204 QQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDH-IMKHLRTVHQNSVF---- 278 (422)
T ss_dssp HHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCHH-HHHHHHHHHHTTTC----
T ss_pred HHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeCHH-HHHHHHHHHhhccC----
Confidence 999999999999976543221111100 00112447788999999744 45787765433 33222110000000
Q ss_pred ccccccCCCCceeccCCCcchHHHHHHHHH------hCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEE
Q 046506 148 ESKQVVDYKDWQITLSRRFRSLKLWFVLRN------YGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFR 221 (310)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~ 221 (310)
+.-.....++.++++. ...+.++++.++..++.+++.+.|+++ ++++..+.....+.+.
T Consensus 279 --------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~ 343 (422)
T 3fvs_A 279 --------------HCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV-GLKPIIPQGSYFLITD 343 (422)
T ss_dssp --------------CCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEBCSBSSEEEEE
T ss_pred --------------CCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHc-CCeecCCCeeeEEEEe
Confidence 0000122233333432 124567888899999999999999987 8887755555555555
Q ss_pred EcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh-cCcEEEEEeE-E-------CCEeEEEEEccCCCCCHHHHHH
Q 046506 222 VSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA-SGKAYMTHAV-L-------GGIYAIRFAAGATLTEERHVMV 292 (310)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~-~-------~~~~~iRis~~~~~~t~edi~~ 292 (310)
+..... .....+.... .....++...+.+ .| +.+.+.. . .+.+++|+|+.. ++++++.
T Consensus 344 ~~~~~~-------~~~~~~~~~~--~~~~~~~~~~ll~~~g-v~v~~g~~f~~~~~~~~~~~~iRis~~~---~~e~i~~ 410 (422)
T 3fvs_A 344 ISDFKR-------KMPDLPGAVD--EPYDRRFVKWMIKNKG-LVAIPVSIFYSVPHQKHFDHYIRFCFVK---DEATLQA 410 (422)
T ss_dssp CHHHHH-------HCCCCCCCTT--CCHHHHHHHHHHHHHC-EECEEGGGGSCHHHHTTSCSEEEEECCC---CHHHHHH
T ss_pred chhhcc-------cccccccccc--cccHHHHHHHHHHhcC-EEEeCcHHhcCCcCCCCCCCeEEEEecC---CHHHHHH
Confidence 543100 0000000000 0002345555444 45 4444421 1 246899999553 8999999
Q ss_pred HHHHHHHHHH
Q 046506 293 AWTVVQEHLE 302 (310)
Q Consensus 293 li~~l~~~~~ 302 (310)
+++.|+++++
T Consensus 411 ~l~~l~~~l~ 420 (422)
T 3fvs_A 411 MDEKLRKWKV 420 (422)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998765
No 135
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.70 E-value=8e-16 Score=139.39 Aligned_cols=228 Identities=10% Similarity=0.098 Sum_probs=146.4
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHH---HHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPL---CDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I---~~l~~~~g~~l~vD 80 (310)
+..|.. ++.+|.++ ++.+|+++|+++++ . +.+|++++++|++|.+.|.++| +++|+ +|+++++|
T Consensus 118 ~~~g~~---~~~v~~~~--~~~~d~~~l~~~i~-~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~D 184 (356)
T 1fg7_A 118 ETIGVE---CRTVPTLD--NWQLDLQGISDKLD-G------VKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVAD 184 (356)
T ss_dssp HHHTCE---EEECCCCT--TSCCCHHHHHTSCT-T------EEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEE
T ss_pred HHcCCE---EEEeeCCC--CCCCCHHHHHHHhc-C------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEE
Confidence 345665 88888874 35799999999886 2 4578888899999999886555 55566 99999999
Q ss_pred cccccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCce
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 159 (310)
++|+.+.. .......... ...+++..+++|+++.| ..+|++++ +++.+.........|
T Consensus 185 e~~~~~~~-~~~~~~~~~~-~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~------------------ 243 (356)
T 1fg7_A 185 EAYIEFCP-QASLAGWLAE-YPHLAILRTLSKAFALAGLRCGFTLA-NEEVINLLMKVIAPY------------------ 243 (356)
T ss_dssp CTTGGGSG-GGCSGGGTTT-CTTEEEEEESSSTTCCGGGCCEEEEE-CHHHHHHHHHHSCSS------------------
T ss_pred ccchhhcC-CCcHHHHHhh-CCCEEEEecchHhhcCchhhhEEEEe-CHHHHHHHHHhcCCC------------------
Confidence 99976541 1111111111 23567889999998744 23688877 444433221111111
Q ss_pred eccCCCcchHHHHHHHHHhCHHH---HHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhc
Q 046506 160 ITLSRRFRSLKLWFVLRNYGVAN---LRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~ 236 (310)
....+...++...+...+ +++..++..++.+++.+.|++++++....++..+.+.+.+..
T Consensus 244 -----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~------------ 306 (356)
T 1fg7_A 244 -----PLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFKA------------ 306 (356)
T ss_dssp -----CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEETT------------
T ss_pred -----CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECCC------------
Confidence 012333444555554433 677888889999999999998876533445566777666641
Q ss_pred cccchhHHHHHHHHHHHHHHHHhcCcEEEEE-eE-ECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 237 NSLLSEEERINEFNRELLESINASGKAYMTH-AV-LGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~~-~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
..++.+.|.+.|. .+.+ .. ....+++|+|+. +++|+++++++|+++
T Consensus 307 -------------~~~l~~~L~~~gI-~v~~~g~~~~~~~~iRis~~----~~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 307 -------------SSAVFKSLWDQGI-ILRDQNKQPSLSGCLRITVG----TREESQRVIDALRAE 354 (356)
T ss_dssp -------------HHHHHHHHHHTTE-ECEECTTSTTCTTEEEEECC----CHHHHHHHHHHHHTC
T ss_pred -------------HHHHHHHHHHCCE-EEEECCCCCCCCCeEEEEeC----CHHHHHHHHHHHHhh
Confidence 1356777766764 4443 21 112358999954 488999999998753
No 136
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.69 E-value=5.2e-16 Score=145.11 Aligned_cols=258 Identities=13% Similarity=0.098 Sum_probs=149.8
Q ss_pred eecCCCCCCEEEEecCCC----C----CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCC-cccccCC---hHHHHHHHH
Q 046506 4 QIVGIDVKNFRAIKTTKS----S----SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTT-AITAVDT---LKPLCDVAK 71 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~----~----~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~-~~G~~~p---l~~I~~l~~ 71 (310)
...|.. ++.++++++ . ++.+|+++|+++|++.+.. .+.+|+++..+| .+|.+.| +++|+++|+
T Consensus 131 ~~~G~~---~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~--~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~ 205 (456)
T 2ez2_A 131 EKNGAV---FVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAE--NIAYICLAVTVNLAGGQPVSMANMRAVRELTE 205 (456)
T ss_dssp HHTTCE---EEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGG--GEEEEEEESSBTTTTSBCCCHHHHHHHHHHHH
T ss_pred HHcCCE---EEEecccccccccccccccCCCCHHHHHHHHHhcccc--ceeEEEEeccCCCCCCccCCHHHHHHHHHHHH
Confidence 345665 888888731 1 2579999999999875411 134677776666 8998877 999999999
Q ss_pred HhCcEEEeeccccccc--------ccChhhh--h---hhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccC
Q 046506 72 QFGIWVHVDAAYAGSA--------CICPEFR--H---FIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTN 138 (310)
Q Consensus 72 ~~g~~l~vD~a~~~~~--------~~~~~~~--~---~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~ 138 (310)
+||+++++|++|+.+. ....... . ... ...|++++|+||+++.| .+|+++.+++..+.......
T Consensus 206 ~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~~S~kk~~~~~-~gG~~~~~~~~~~~~~~~~~ 282 (456)
T 2ez2_A 206 AHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMF--SYADGCTMSGKKDCLVN-IGGFLCMNDDEMFSSAKELV 282 (456)
T ss_dssp HTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHH--TTCSEEEEETTTTTCCS-SCEEEEESCHHHHHHHHHHH
T ss_pred HcCCeEEEEccccccccccccccccccCCcchhhhhhhhc--ccCCEEEEeCcccCCCC-ceeEEEECCHHHHHHHHHHH
Confidence 9999999999997641 1111100 0 001 13789989999987744 35666665554433221111
Q ss_pred CccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHH-HHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceE
Q 046506 139 PEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANL-RHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAV 217 (310)
Q Consensus 139 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~ 217 (310)
..+.. .. ...+.+...+.. .++... +.+ ++..++..++++++.+.|.+. ++++..+.....
T Consensus 283 ~~~~~-~~-------------~~~~~~~~~~~a-~a~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~~~~~ 344 (456)
T 2ez2_A 283 VVYEG-MP-------------SYGGLAGRDMEA-MAIGLR--EAMQYEYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHA 344 (456)
T ss_dssp HHHTC-CT-------------TTTTCCHHHHHH-HHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHT-TCCBCSSCCSSE
T ss_pred hhccC-cc-------------cccCcchhHHHH-HHHHHH--HHhHHHHHHHHHHHHHHHHHHHhcC-CCccccCCCceE
Confidence 01000 00 001111111111 011111 233 466677778889999999875 777665545555
Q ss_pred EEEEEcC--CcchhhhhhhhccccchhHHHHHHH-HHHHHHHH-HhcCcEEEEEeE-------------ECCEeEEEEEc
Q 046506 218 VCFRVSP--SAVMDKLKTKYENSLLSEEERINEF-NRELLESI-NASGKAYMTHAV-------------LGGIYAIRFAA 280 (310)
Q Consensus 218 v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l-~~~g~~~~~~~~-------------~~~~~~iRis~ 280 (310)
+.+.+.. ... +. ..+ .+.+.+.| .+.|........ ..+.+.+|+|+
T Consensus 345 ~~~~~~~~~~~~--------------~~---~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~ 407 (456)
T 2ez2_A 345 VFLDARRFCEHL--------------TQ---DEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTI 407 (456)
T ss_dssp EEEEHHHHTTTS--------------CG---GGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEEC
T ss_pred EEEEhHHhcCCC--------------Ch---hhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEe
Confidence 5555431 100 00 111 23445556 455643333111 11246899997
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 281 GATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 281 ~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+.+.++++|+++++++|++++.+.
T Consensus 408 ~~~~~t~e~i~~~~~~l~~~l~~~ 431 (456)
T 2ez2_A 408 PRRVYTYAHMDVVADGIIKLYQHK 431 (456)
T ss_dssp CTTTCCHHHHHHHHHHHHHHHHTG
T ss_pred CCCCCCHHHHHHHHHHHHHHHhhh
Confidence 743389999999999999988664
No 137
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.69 E-value=3.1e-16 Score=144.27 Aligned_cols=228 Identities=15% Similarity=0.173 Sum_probs=144.6
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh----CcEEEe
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF----GIWVHV 79 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~----g~~l~v 79 (310)
+..|+. ++++|.+ | ++|+++|++. +.+|++.+.+|++|.+.|+++|+++|++| |+++|+
T Consensus 115 ~~~G~~---v~~v~~~-------d-~~l~~~i~~~------t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~liv 177 (393)
T 1n8p_A 115 NAHGVE---TSFTNDL-------L-NDLPQLIKEN------TKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVV 177 (393)
T ss_dssp TTTCSC---CEEESSH-------H-HHHHHHSCSS------EEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEE
T ss_pred HHcCcE---EEEeCCC-------h-HHHHHhcccC------ceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEE
Confidence 345665 7777764 5 7888888643 55888899999999999999999999999 999999
Q ss_pred ecccccccccChhhhhhhcCCCCCCeeeeecccccccccc--e-EEEEEeCchhHHhhhccCCccccccccccccccCCC
Q 046506 80 DAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD--C-CCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~-g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 156 (310)
|++|+.+..... ... ++|+++.|+||+++++ | . |+++.+++..+....... .
T Consensus 178 D~a~~~~~~~~~------~~~-~~di~~~S~sK~~g~~-G~rigG~~~~~~~~~~~~l~~~~----~------------- 232 (393)
T 1n8p_A 178 DNTFLSPYISNP------LNF-GADIVVHSATKYINGH-SDVVLGVLATNNKPLYERLQFLQ----N------------- 232 (393)
T ss_dssp ECTTTHHHHCCG------GGG-TCSEEEEETTTTTTCS-SCCCCEEEEESCHHHHHHHHHHH----H-------------
T ss_pred eCCccccccCCH------HHc-CCeEEEEECcccccCC-CCceeEEEEeCCHHHHHHHHHHH----H-------------
Confidence 999987765311 111 5899999999998754 5 5 666665554443221110 0
Q ss_pred CceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCC-eEEe-cC-----C------------C-ce
Q 046506 157 DWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKR-FEVV-FP-----R------------H-FA 216 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~-~~v~-~~-----~------------~-~~ 216 (310)
..+........+..+..+ +.+..++++..++++.+.+.|.+.+. +.-+ .+ + . .+
T Consensus 233 ----~~g~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~ 306 (393)
T 1n8p_A 233 ----AIGAIPSPFDAWLTHRGL--KTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGG 306 (393)
T ss_dssp ----HHCCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCS
T ss_pred ----hcCCCCCHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCcc
Confidence 000111223333333322 34566778888889999999988766 5422 11 1 2 56
Q ss_pred EEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh------cCcEE---EEEe--EE----------CC--E
Q 046506 217 VVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA------SGKAY---MTHA--VL----------GG--I 273 (310)
Q Consensus 217 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------~g~~~---~~~~--~~----------~~--~ 273 (310)
+++|.+.+. ......+.+.+.. .|..+ ..+. .. .+ .
T Consensus 307 i~~~~l~~~---------------------~~~~~~~l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~ 365 (393)
T 1n8p_A 307 MISFRIKGG---------------------AEAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFD 365 (393)
T ss_dssp EEEEEESSC---------------------HHHHHHHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCT
T ss_pred EEEEEeCCc---------------------HHHHHHHHhhCCcceECCCCCCCcceeeccccccccccCHHHHHhcCCCC
Confidence 888888652 1112334444322 12111 1000 00 11 4
Q ss_pred eEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 274 YAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 274 ~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
+.||+|+. ..+++++|+.+.++|+++.
T Consensus 366 ~~iRlS~g-~~~~~~~i~~l~~al~~~~ 392 (393)
T 1n8p_A 366 DLVRISVG-IEDTDDLLEDIKQALKQAT 392 (393)
T ss_dssp TEEEEECC-SSCHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEc-cCCHHHHHHHHHHHHHHhh
Confidence 79999976 6899999999999998753
No 138
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.69 E-value=1.1e-16 Score=147.75 Aligned_cols=248 Identities=12% Similarity=0.064 Sum_probs=152.6
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD 80 (310)
...|.. ++.+|.++++.+.+|+++|+++|++. +.+|++++++|++|.+.| +++|+++|++||+++++|
T Consensus 141 ~~~g~~---~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~D 211 (412)
T 2x5d_A 141 VIAGAQ---VRSVPLVPGIDFFNELERAIRESIPK------PRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHD 211 (412)
T ss_dssp HHHTCE---EEEEECSTTSCHHHHHHHHHHTEESC------CSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHcCCE---EEEeecCCccCCCCCHHHHHHhcccC------ceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEe
Confidence 345665 88899886433558999999988632 346777788899999877 688999999999999999
Q ss_pred cccccccccChhhhhh--hcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 81 AAYAGSACICPEFRHF--IDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~--~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
++|+.+.......... .....+.|+++.++||+++.| ..+|+++++ +..+....... .+...
T Consensus 212 e~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~l~~~~-~~~~~------------- 276 (412)
T 2x5d_A 212 LAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGN-PELVSALARIK-SYHDY------------- 276 (412)
T ss_dssp CTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEEC-HHHHHHHHHHH-HHHCC-------------
T ss_pred ccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcC-HHHHHHHHHHH-hhhcc-------------
Confidence 9998765422111110 111124688999999999744 347888774 43332221100 00000
Q ss_pred ceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCce-EEEEEEcCCcchhhhhhhhc
Q 046506 158 WQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFA-VVCFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~-~v~~~~~~~~~~~~~~~~~~ 236 (310)
. .-.....++.++++ .+.++++++.++..++.+++.+.|+++ ++++. ++..+ ++.+.+... .
T Consensus 277 ---~-~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~g~~~~~~~~~~-~--------- 339 (412)
T 2x5d_A 277 ---G-TFTPLQVAAIAALE-GDQQCVRDIARQYQQRRDVLVKGLREA-GWMVE-NPKASMYVWAKIPEP-Y--------- 339 (412)
T ss_dssp ---C-CCHHHHHHHHHHHH-SCSHHHHHHHHHHHHHHHHHHHHHHHH-TCCCC-CCSBSSEEEEECCTT-T---------
T ss_pred ---C-CCHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEec-CCCeeeEEEEEcCCc-c---------
Confidence 0 00011222233333 234567888899999999999999876 77765 34444 455555321 0
Q ss_pred cccchhHHHHHHHHHHHHHHHHh-cCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 237 NSLLSEEERINEFNRELLESINA-SGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
. .....++.+.|.+ .|.....+.... +.+++|+|++. ++++++.+++.|++++.++
T Consensus 340 -----~----~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~---~~~~l~~~l~~l~~~l~~~ 398 (412)
T 2x5d_A 340 -----A----HLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIE---NRDRLRQAVRGIKAMFRAD 398 (412)
T ss_dssp -----G----GGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCS---CHHHHHHHHHHHHHHHHHT
T ss_pred -----C----CCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecC---CHHHHHHHHHHHHHHHHhc
Confidence 0 0001356666654 464433322211 24689999652 7899999999999988765
No 139
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.69 E-value=1.4e-16 Score=145.71 Aligned_cols=242 Identities=15% Similarity=0.069 Sum_probs=148.4
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD 80 (310)
+..|.. ++.+|.++.+++.+|+++|+++|++. +.+|++++++|++|.+.| +++|+++|++||+++++|
T Consensus 133 ~~~g~~---~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D 203 (385)
T 1b5p_A 133 RFAGGV---VVEVETLPEEGFVPDPERVRRAITPR------TKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSD 203 (385)
T ss_dssp HHTTCE---EEEEECCGGGTTCCCHHHHHTTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHcCCE---EEEeecCcccCCCCCHHHHHHhcCCC------CEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEE
Confidence 445666 89999986324689999999998653 457788889999999877 899999999999999999
Q ss_pred cccccccccChhhhhhhcCC-CCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 81 AAYAGSACICPEFRHFIDGV-EGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~-~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
++++.+.... .... ...+ ...+++..+++|+++.| | +|+++++ +..+....... .+... .
T Consensus 204 e~~~~~~~~~-~~~~-~~~~~~~~~i~~~s~SK~~~~~-G~RiG~~~~~-~~~~~~l~~~~-~~~~~-~----------- 266 (385)
T 1b5p_A 204 EIYEHLLYEG-EHFS-PGRVAPEHTLTVNGAAKAFAMT-GWRIGYACGP-KEVIKAMASVS-RQSTT-S----------- 266 (385)
T ss_dssp CTTTTCBSSS-CCCC-GGGTCTTTEEEEEESTTTTTCG-GGCCEEEECC-HHHHHHHHHHH-HTTTC-S-----------
T ss_pred ccchhcccCC-CCCC-HHHcCCCCEEEEEechhhcCCc-ccceEEEEeC-HHHHHHHHHHH-hhccC-C-----------
Confidence 9997654321 1100 0111 13567888999998755 5 7888764 43332221110 00000 0
Q ss_pred ceeccCCCcchHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhh
Q 046506 158 WQITLSRRFRSLKLWFVLRN--YGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~ 235 (310)
.-......+.++++. .+.+.+++..++..++.+++.+.|+++ ++++..+.....+...+.....
T Consensus 267 -----~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-------- 332 (385)
T 1b5p_A 267 -----PDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAVRPSGAFYVLMDTSPIAP-------- 332 (385)
T ss_dssp -----CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCCCSBTTEEEEECTTTCS--------
T ss_pred -----CCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEecCCCCC--------
Confidence 000111222223321 024557778888888899999999887 7776533333334344431100
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
+ ..++.+.|.+.|.....+......+++|+|+. +++++++.+++.|++.+
T Consensus 333 ------~-------~~~l~~~l~~~gv~v~~g~~f~~~~~iRis~~---~~~~~i~~~l~~l~~~l 382 (385)
T 1b5p_A 333 ------D-------EVRAAERLLEAGVAVVPGTDFAAFGHVRLSYA---TSEENLRKALERFARVL 382 (385)
T ss_dssp ------S-------HHHHHHHHHHTTEECEESGGGTCTTEEEEECC---SCHHHHHHHHHHGGGGC
T ss_pred ------C-------HHHHHHHHHHCCeEEecccccCCCCeEEEEec---CCHHHHHHHHHHHHHHH
Confidence 0 13566777766644333222222468999954 68889999998887654
No 140
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.68 E-value=1.8e-16 Score=148.58 Aligned_cols=245 Identities=13% Similarity=0.086 Sum_probs=138.2
Q ss_pred cccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcc-cccC---ChHHHHHHHHHhCcEEEeeccccc-ccc----------
Q 046506 24 YGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAI-TAVD---TLKPLCDVAKQFGIWVHVDAAYAG-SAC---------- 88 (310)
Q Consensus 24 ~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~-G~~~---pl~~I~~l~~~~g~~l~vD~a~~~-~~~---------- 88 (310)
+.+|+++|+++|++... ..+.+|+++..+|++ |.+. ++++|+++|++||+++|+|++|+. +.+
T Consensus 165 ~~~d~~~le~~i~~~~~--~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~ 242 (467)
T 1ax4_A 165 GDFDIKKLKENIAQHGA--DNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYK 242 (467)
T ss_dssp TCBCHHHHHHHHHHHCG--GGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGT
T ss_pred cccCHHHHHHHHHhcCC--CCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccC
Confidence 47999999999986420 014578888888888 7764 478999999999999999999765 221
Q ss_pred cChhhhhhhcC-CCCCCeeeeecccccccccceEEEEEeCc-hhHHhhhccCCccccccccccccccCCCCceeccCCCc
Q 046506 89 ICPEFRHFIDG-VEGADSFSLNAHKWFFTTLDCCCLWVKDP-SDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRF 166 (310)
Q Consensus 89 ~~~~~~~~~~~-~~~~D~~~~~~hK~l~~p~g~g~l~v~~~-~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (310)
..+ ......+ ...+|++++++||+++.|.| |+++.+++ +.+.........+ . ... . .++...
T Consensus 243 ~~~-~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~d~~~l~~~~~~~~~~~-~-~~~---------~---~~~~~~ 306 (467)
T 1ax4_A 243 NAT-IKEVIFDMYKYADALTMSAKKDPLLNIG-GLVAIRDNEEIFTLARQRCVPM-E-GFV---------T---YGGLAG 306 (467)
T ss_dssp TCC-HHHHHHHHGGGCSEEEEETTSTTCCSSC-EEEEESSCHHHHHHHHHHHHHH-T-CST---------T---TTTCCH
T ss_pred CCc-hhhhhhhhccccceEEEeccccCCCCcc-eEEEeCCHHHHHHHHHhhcccc-c-ccc---------c---cCCccc
Confidence 110 0000000 02478999999999987754 55555535 4443221111111 0 000 0 011111
Q ss_pred ch-HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHH
Q 046506 167 RS-LKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEER 245 (310)
Q Consensus 167 ~~-~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (310)
.. .++..+++.... ++.+++..++++++.+.|.+ +++++..+.....+.+.+.... . . ....
T Consensus 307 ~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~-~------~-----~~~~- 369 (467)
T 1ax4_A 307 RDMAAMVQGLEEGTE---EEYLHYRIGQVKYLGDRLRE-AGIPIQYPTGGHAVFVDCKKLV-P------Q-----IPGD- 369 (467)
T ss_dssp HHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHH-TTCCBCSSCCSSEEEEESTTTC-T------T-----SCGG-
T ss_pred hHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHh-CCCCcccCCCceEEEEehhhhc-c------c-----cccC-
Confidence 11 112223332211 22444445677888888877 5777765555555655521100 0 0 0000
Q ss_pred HHHHHHHHHHHH-HhcCcEEEEEeEE--------C-----CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 246 INEFNRELLESI-NASGKAYMTHAVL--------G-----GIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 246 ~~~~~~~l~~~l-~~~g~~~~~~~~~--------~-----~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
..-..++.+.| .+.|......... + ..+.+|+|+....+|++|+++++++|+++++.+
T Consensus 370 -~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~ 441 (467)
T 1ax4_A 370 -QFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKF 441 (467)
T ss_dssp -GCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHH
T ss_pred -CCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHhh
Confidence 00124566777 6666443331110 0 137999997744489999999999999988765
No 141
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.68 E-value=1.7e-15 Score=140.55 Aligned_cols=196 Identities=17% Similarity=0.190 Sum_probs=122.6
Q ss_pred eecCCCCCCEEEE-ecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 4 QIVGIDVKNFRAI-KTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 4 ~~~g~~~~~v~~v-~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
...|+. ++++ +.+ |+++|+++|++. +.+|++++.+|++|.+.|+++|+++|++||+++++|++
T Consensus 119 ~~~g~~---~~~~~~~~-------d~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~ 182 (421)
T 2ctz_A 119 KRLGIE---VRFTSREE-------RPEEFLALTDEK------TRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNT 182 (421)
T ss_dssp HHTTCE---EEECCTTC-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECG
T ss_pred HHcCCE---EEEECCCC-------CHHHHHHhhccC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECC
Confidence 344555 6666 442 789999999764 45888999999999999999999999999999999999
Q ss_pred c-ccccccChhhhhhhcCCCCCCeeeeecccccccccc-eEEEEEeC--chh----HHhhhccCCcccccccccccc---
Q 046506 83 Y-AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD-CCCLWVKD--PSD----LVNSLSTNPEYLKNKATESKQ--- 151 (310)
Q Consensus 83 ~-~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g-~g~l~v~~--~~~----~~~~~~~~~~y~~~~~~~~~~--- 151 (310)
| +.+.. .... . .++|++++|+||++++|.+ .|++++.+ ..+ +.......+.+..........
T Consensus 183 ~~~~g~~-~~~~-----~-~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~ 255 (421)
T 2ctz_A 183 FGMGGYL-LRPL-----A-WGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELA 255 (421)
T ss_dssp GGGGGTS-CCGG-----G-GTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGH
T ss_pred ccccccc-CCcc-----c-cCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhH
Confidence 9 76532 2111 1 1489999999999998764 67777763 221 111111111111110000000
Q ss_pred ccCC-C-CceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEec-C----------------
Q 046506 152 VVDY-K-DWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVF-P---------------- 212 (310)
Q Consensus 152 ~~~~-~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~-~---------------- 212 (310)
.... + ......+.....+.+|..+. +.+.+..++++..++++++.+.|+++|++..+. +
T Consensus 256 ~~~~~r~~~~~~~g~~~~~~~a~~~~~--~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~ 333 (421)
T 2ctz_A 256 FIVKARVDGLRDQGQALGPFEAWVVLL--GMETLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFK 333 (421)
T ss_dssp HHHHHHHTHHHHHCCCCCHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHc--CcchHHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhcc
Confidence 0000 0 00000122233444444433 334566778888899999999999999998763 1
Q ss_pred -CCceEEEEEEcC
Q 046506 213 -RHFAVVCFRVSP 224 (310)
Q Consensus 213 -~~~~~v~~~~~~ 224 (310)
...++++|.+.+
T Consensus 334 ~~~g~ivsf~l~~ 346 (421)
T 2ctz_A 334 GKPGAVLTFGLKG 346 (421)
T ss_dssp TCCCSEEEEEETT
T ss_pred CCCceEEEEEeCC
Confidence 235688998865
No 142
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.68 E-value=2.3e-16 Score=143.64 Aligned_cols=237 Identities=11% Similarity=0.034 Sum_probs=148.2
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD 80 (310)
+..|.. ++.+|. ++ .+.+|+++|+++|++. +.+|++++++|++|.+.| +++|+++|++||+++++|
T Consensus 129 ~~~g~~---~~~~~~-~~-~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~D 197 (376)
T 2dou_A 129 RVASLR---TFLIPL-RE-DGLADLKAVPEGVWRE------AKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHD 197 (376)
T ss_dssp HHTTCE---EEEECB-CT-TSSBCGGGSCHHHHHH------EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHcCCE---EEEeeC-CC-CCCCCHHHHHHhhccC------ceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 345665 888888 33 4579999999999653 457777788899999877 678999999999999999
Q ss_pred cccccccccChhhhhhhc--CCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 81 AAYAGSACICPEFRHFID--GVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~--~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
++|+.+..... ...... +....+++..++||+++.| ..+|+++. ++..+.........+..
T Consensus 198 e~~~~~~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~l~~~~~~~~~-------------- 261 (376)
T 2dou_A 198 NPYVDQVYEGE-APSPLALPGAKERVVELFSLSKSYNLAGFRLGFALG-SEEALARLERVKGVIDF-------------- 261 (376)
T ss_dssp CTTGGGBSSSC-CCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEE-CHHHHHHHHHHHHHHCC--------------
T ss_pred ccchhcccCCC-CCChhhcCCCCCcEEEEecchhhcCChhheeEEEec-CHHHHHHHHHHHHhccc--------------
Confidence 99986653221 000011 1113567889999999744 34687765 44443222111000000
Q ss_pred ceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhcc
Q 046506 158 WQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYEN 237 (310)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 237 (310)
..+ .....++.++++. +.+.+++..++..++.+++.+.|.++ +++..+.....+.+.+....
T Consensus 262 ---~~~-~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~----------- 323 (376)
T 2dou_A 262 ---NQY-AGVLRMGVEALKT-PKEVVRGYARVYRERALGMAEALKGV--LSLLPPRATMYLWGRLPEGV----------- 323 (376)
T ss_dssp ---CSC-HHHHHHHHHHHTS-CHHHHHHHHHHHHHHHHHHHHHHTTT--SEECCCCBSSEEEEECCTTC-----------
T ss_pred ---CCC-HHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHh--cCccCCCeeEEEEEECCCCC-----------
Confidence 000 0112222333332 25677888889999999999999886 66653333334556554310
Q ss_pred ccchhHHHHHHHHHHHHHHHHhcCcEEEEEe-EEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 238 SLLSEEERINEFNRELLESINASGKAYMTHA-VLG--GIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
+ ..++.+.|.++|. .+.+. ... +.+++|+|++ .++++++.+++.|+++
T Consensus 324 ----~-------~~~~~~~l~~~gi-~v~~g~~f~~~~~~~~Ris~~---~~~~~i~~~l~~l~~~ 374 (376)
T 2dou_A 324 ----D-------DLEFGLRLVERGV-ALAPGRGFGPGGKGFVRIALV---RPLEELLEAAKRIREA 374 (376)
T ss_dssp ----C-------HHHHHHHHHHTTE-ECEEGGGGCGGGTTEEEEECC---SCHHHHHHHHHHHHHT
T ss_pred ----C-------HHHHHHHHHHCCE-EEcCchhhCCCCCCeEEEEec---CCHHHHHHHHHHHHHH
Confidence 0 1356777777764 44432 111 2468999965 2789999999998764
No 143
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.68 E-value=6.5e-16 Score=138.36 Aligned_cols=226 Identities=11% Similarity=0.039 Sum_probs=147.2
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
++..|+. ++.+|.+++ +.+|+++|+++. . +.++++.+++|++|.+.|++++.++|+++++ +++|++
T Consensus 107 ~~~~g~~---~~~v~~~~~--~~~d~~~l~~~~--~------~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea 172 (337)
T 3p1t_A 107 IAVSGLR---HFEIGLTDD--LLLDPNDLAQVS--R------DDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDET 172 (337)
T ss_dssp HTTSCCE---EEEECBCTT--SSBCHHHHTTCC--T------TEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECT
T ss_pred HHHcCCE---EEEecCCCC--CCCCHHHHHhhc--C------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECC
Confidence 3455666 889998863 589999998762 1 4588899999999999999999999999997 667999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccc-cccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceec
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~-~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
|+........ .......+++..|++|+++ ...++|+++. ++..+....... . ...
T Consensus 173 ~~~~~~~~~~----~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~-~---~~~--------------- 228 (337)
T 3p1t_A 173 YVDYSSFRAR----GLAYGENELVFRSFSKSYGLAGLRLGALFG-PSELIAAMKRKQ-W---FCN--------------- 228 (337)
T ss_dssp TGGGSSCSSS----CCCCBTTEEEEEESSSTTCCTTTCCEEEEC-CHHHHHHHHTTS-C---TTC---------------
T ss_pred Chhhcccccc----ccccCCCEEEEeeCchhccCcchheEEEEe-CHHHHHHHHhhc-C---CCC---------------
Confidence 9753321110 1112246788999999997 3455677765 443433221110 0 000
Q ss_pred cCCCcchHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccc
Q 046506 162 LSRRFRSLKLWFVLRNYG-VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLL 240 (310)
Q Consensus 162 ~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 240 (310)
...+...++...+. .+.+++.+++..++.+++.+.|+++ ++++. ++..+++.+.....
T Consensus 229 ----~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~--------------- 287 (337)
T 3p1t_A 229 ----VGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL-GYRVA-SSEANFVLVENAAG--------------- 287 (337)
T ss_dssp ----SCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBC-CCSSSEEEEECTTT---------------
T ss_pred ----CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-cCEEC-CCCCeEEEEEcCCH---------------
Confidence 11222222333332 2456778888888899999999887 77765 45666666654332
Q ss_pred hhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 241 SEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 241 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
.++.+.|.+.|.....+......+++|+|++ +++|+++++++|+++.
T Consensus 288 ----------~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~----~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 288 ----------ERTLRFLRERGIQVKDAGQFGLHHHIRISIG----REEDNDRLLAALAEYS 334 (337)
T ss_dssp ----------HHHHHHHHHTTEECEEGGGGTCCSEEEEECC----CHHHHHHHHHHHHHHT
T ss_pred ----------HHHHHHHHHCCeEEEECccCCCCCeEEEecC----CHHHHHHHHHHHHHHh
Confidence 2455666677644333322233579999944 6899999999998865
No 144
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.68 E-value=1.5e-16 Score=145.63 Aligned_cols=250 Identities=12% Similarity=0.052 Sum_probs=147.9
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHH-HHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKI-NSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i-~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
...|.. +++++++++ ++.+|+++|+++| ++..+ +.+|+ .++++|.+.|+++|+++|+ ||+++++|++
T Consensus 96 ~~~G~~---~~~v~~~~~-~~~~d~~~l~~~i~~~~~~----tk~v~---~~~~~G~~~~~~~i~~la~-~~~~vi~D~a 163 (377)
T 3ju7_A 96 IWCGLE---PYFIDISID-DWYMDKTVLWDKIEELKEE----VAIVV---PYATFGSWMNLEEYEELEK-KGVPVVVDAA 163 (377)
T ss_dssp HHTTCE---EEEECBCTT-TCSBCHHHHHHHHHHHGGG----EEEEC---CBCGGGBCCCCHHHHHHHH-TTCCBEEECT
T ss_pred HHcCCE---EEEEecCCc-cCCcCHHHHHHHHhcCCCC----ceEEE---EECCCCCccCHHHHHHHHh-cCCEEEEECC
Confidence 456776 899999864 5789999999999 44311 23444 3456899999999999999 9999999999
Q ss_pred cccccccChhhhhhh-cCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceec
Q 046506 83 YAGSACICPEFRHFI-DGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~-~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
|+.+...... . . ....+++++++++||++++ ...|+++++++....+..... .+ +... .+ ....
T Consensus 164 ~a~g~~~~~~--~-~g~~~~d~~~~S~~~~K~l~~-g~gG~~~~~~~~l~~~~~~~~-~~--g~~~------~~--~~~~ 228 (377)
T 3ju7_A 164 PGFGLMNGGM--H-YGQDFSGMIIYSFHATKPFGI-GEGGLIYSKNEEDIQRIKRMG-NF--GFDT------NR--ECTM 228 (377)
T ss_dssp TCTTCEETTE--E-TTTTCSSEEEEECBTTSSSCC-BSCEEEEESCHHHHHHHHHHT-BT--TBCT------TS--CBCS
T ss_pred CccCCeECCE--e-ccCCCCcEEEEECCCCCcCCC-CCcEEEEECCHHHHHHHHHHH-hc--CCCC------CC--ceee
Confidence 9866542211 1 1 1122456677778999987 355666666665433221111 00 0000 00 0011
Q ss_pred cCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEE-ecCCC----c-eEEEEEEcCCcchhhhhhhh
Q 046506 162 LSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEV-VFPRH----F-AVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 162 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v-~~~~~----~-~~v~~~~~~~~~~~~~~~~~ 235 (310)
.+.++....+.+++.....+.++++.++..++++++.+.|.+++++.+ ..++. . ..+.+.+....
T Consensus 229 ~g~~~~~~~~~aa~~~~~l~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 299 (377)
T 3ju7_A 229 MGFNCKMSEYAAAIGIATMKKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEEV--------- 299 (377)
T ss_dssp SCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTTS---------
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCChh---------
Confidence 122222222333333334467888899999999999999998865422 11111 1 12334433210
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcEEEEEe-E------------EC--------CEeEEEEEccCCCCCHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKAYMTHA-V------------LG--------GIYAIRFAAGATLTEERHVMVAW 294 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~------------~~--------~~~~iRis~~~~~~t~edi~~li 294 (310)
..+++.+.|.++|+...... . .. ....||+++. +.+|++|+++++
T Consensus 300 -------------~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~-~~~t~~di~~v~ 365 (377)
T 3ju7_A 300 -------------RNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLW-EGMTKEIVEQIV 365 (377)
T ss_dssp -------------CHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCC-TTCCHHHHHHHH
T ss_pred -------------hHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCC-CCCCHHHHHHHH
Confidence 01467778877775321110 0 00 1468999954 789999999999
Q ss_pred HHHHHHHHH
Q 046506 295 TVVQEHLEA 303 (310)
Q Consensus 295 ~~l~~~~~~ 303 (310)
++|+++...
T Consensus 366 ~~l~~~~~~ 374 (377)
T 3ju7_A 366 ICLGQKVVS 374 (377)
T ss_dssp HHHTC----
T ss_pred HHHHHHHhc
Confidence 999887654
No 145
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.67 E-value=1.6e-16 Score=146.50 Aligned_cols=240 Identities=9% Similarity=-0.019 Sum_probs=149.8
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD 80 (310)
+..|.. ++.+|.+++ .+.+|+++|+++|++. +.+|++++++|++|.+.| +++|+++|++||+++++|
T Consensus 151 ~~~g~~---~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~D 220 (404)
T 2o1b_A 151 LLADGK---PVPLNLEPP-HYLPDWSKVDSQIIDK------TKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHD 220 (404)
T ss_dssp HHTTCE---EEEEECCTT-TCCCCGGGSCHHHHHH------EEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEE
T ss_pred HHCCCE---EEEeccCcc-cCcCCHHHHHHhhccC------ceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 345665 889998863 3568999999999753 457777788899999886 788999999999999999
Q ss_pred cccccccccChhhhhhhc--CCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCC
Q 046506 81 AAYAGSACICPEFRHFID--GVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKD 157 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~--~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 157 (310)
++|+.+..... ...... +..+.++++.++||+++.| ..+|+++. ++..+.........+.
T Consensus 221 e~~~~~~~~g~-~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~~--------------- 283 (404)
T 2o1b_A 221 FAYGAFGFDAK-NPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVG-NKDMIQALKKYQTHTN--------------- 283 (404)
T ss_dssp CTTTTCBSSSC-CCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEE-CHHHHHHHHHHHHHHC---------------
T ss_pred ccchhcccCCC-CCChhhcCCCCCCEEEEEecchhccCchhheEeEec-CHHHHHHHHHHHhhcc---------------
Confidence 99976543211 000000 0012467889999999744 34688765 4444332211100000
Q ss_pred ceeccCCC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCce-EEEEEEcCCcchhhhhhhh
Q 046506 158 WQITLSRR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFA-VVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 158 ~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~-~v~~~~~~~~~~~~~~~~~ 235 (310)
.+.. .....+.++++. +.+.+++..++..++.+++.+.|+++ ++++.. +..+ .+.+.+....
T Consensus 284 ----~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~g~~~~~~~~~~~--------- 347 (404)
T 2o1b_A 284 ----AGMFGALQDAAIYALNH-YDDFLEEQSNVFKTRRDRFEAMLAKA-DLPFVH-AKGGIYVWLETPPGY--------- 347 (404)
T ss_dssp ----CCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEC-CCBSSEEEEECCTTC---------
T ss_pred ----CCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHhc-CCeecC-CCcceEEEEeCCCCC---------
Confidence 0000 112223333332 35567888888999999999999887 787764 4444 3555554210
Q ss_pred ccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeEEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESIN-ASGKAYMTHAVLG--GIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
+ ..++.+.+. +.|.....+..+. +.+++|+|+.. ++++++.+++.|+++++
T Consensus 348 ------~-------~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~---~~e~l~~~l~~l~~~l~ 401 (404)
T 2o1b_A 348 ------D-------SEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL---DDQKLDEAAIRLTELAY 401 (404)
T ss_dssp ------C-------HHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS---CTTHHHHHHHHHHGGGG
T ss_pred ------C-------HHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC---CHHHHHHHHHHHHHHHH
Confidence 0 134566665 3564333322111 24689999662 67899999998887653
No 146
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.67 E-value=2e-15 Score=138.20 Aligned_cols=214 Identities=14% Similarity=0.079 Sum_probs=136.6
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++|+++|++. +.+|++++.+|++|.+.| +++|+++|++||+++++|++|++.............++ .
T Consensus 171 d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~ 243 (392)
T 3ruy_A 171 DLEALKAAITPN------TAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNV-T 243 (392)
T ss_dssp CHHHHHHHCCTT------EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTC-C
T ss_pred cHHHHHHHhccC------eEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCC-C
Confidence 799999999733 568888889999999998 99999999999999999999964322211111011122 3
Q ss_pred CCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
.|++++| |++++. ...|+++.++ ... +.+.. ..... ++ ..-...+.++.++++.+
T Consensus 244 ~d~~~~S--K~l~gG~~~~G~~~~~~-~~~-~~~~~---~~~~~-------------~~-~~~~~~~~a~~~~l~~~--- 299 (392)
T 3ruy_A 244 PDMYILG--KALGGGVFPISCAAANR-DIL-GVFEP---GSHGS-------------TF-GGNPLACAVSIAALEVL--- 299 (392)
T ss_dssp CSEEEEC--GGGGTTTSCCEEEEECH-HHH-TTCCT---TSSCC-------------SS-TTCHHHHHHHHHHHHHH---
T ss_pred CCEEEEc--hhhhCChhhhEEEEECH-HHH-hhhcc---CCcCC-------------CC-CCCHHHHHHHHHHHHHH---
Confidence 6887765 987652 3477777653 333 22110 00000 00 00011223333344332
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC--CCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSD--KRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA 259 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~--~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 259 (310)
..++..++..++++++.+.|+++ +.+... ++..+++.+.+.... .++.+.|.+
T Consensus 300 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~g~~~~~~~~~~~------------------------~~l~~~l~~ 354 (392)
T 3ruy_A 300 EEEKLTERSLQLGEKLVGQLKEIDNPMITEV-RGKGLFIGIELNEPA------------------------RPYCEQLKA 354 (392)
T ss_dssp HHTTHHHHHHHHHHHHHHHHTTCCCTTEEEE-EEETTEEEEEESSCS------------------------HHHHHHHHT
T ss_pred HhhhHHHHHHHHHHHHHHHHHHhcCCCceEE-EeeeeEEEEEEcchH------------------------HHHHHHHHH
Confidence 22677888899999999999886 334443 334566777665321 356777777
Q ss_pred cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 260 SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 260 ~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
.|. .+.+. +.+++|++++ ..++++|++.++++|++++
T Consensus 355 ~gi-~v~~~---~~~~iRi~~~-~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 355 AGL-LCKET---HENVIRIAPP-LVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp TTE-ECCCB---TTTEEEECCC-TTCCHHHHHHHHHHHHHHH
T ss_pred CCc-EEecC---CCCEEEEECC-CCCCHHHHHHHHHHHHHHh
Confidence 764 44332 3578999965 6799999999999998864
No 147
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.67 E-value=2.5e-16 Score=143.12 Aligned_cols=216 Identities=13% Similarity=0.110 Sum_probs=137.8
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccCh--hhhhhhcCCCCC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICP--EFRHFIDGVEGA 103 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~--~~~~~~~~~~~~ 103 (310)
+|+++|+++|++. +.+|++++++|++|.+.|++ |+++|++||+++++|++|+.+..... .... ..+..+.
T Consensus 142 ~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~-~~~~~~~ 213 (370)
T 2z61_A 142 FTVESLEEALSDK------TKAIIINSPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIE-FDENLEK 213 (370)
T ss_dssp SSHHHHHHHCCSS------EEEEEEESSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGG-TCTTCSS
T ss_pred CCHHHHHHhcccC------ceEEEEcCCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHH-ccCCCCc
Confidence 6789999998642 45777888899999999999 99999999999999999987654221 1111 1112357
Q ss_pred Ceeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHh---
Q 046506 104 DSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNY--- 178 (310)
Q Consensus 104 D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--- 178 (310)
|+++.|+||+++.| | +|+++.++ ............+.. + ...+..+++...+
T Consensus 214 ~i~~~s~sK~~~~~-G~r~G~~~~~~-~~~~~~~~~~~~~~~-------------------~--~~~~~~~a~~~~l~~~ 270 (370)
T 2z61_A 214 TILINGFSKLYAMT-GWRIGYVISND-EIIEAILKLQQNLFI-------------------S--APTISQYAALKAFEKE 270 (370)
T ss_dssp EEEEEESTTTTTCG-GGCCEEEECCH-HHHHHHHHHHHHHTS-------------------S--SCHHHHHHHGGGGSHH
T ss_pred EEEEecChhccCCc-cceEEEEEECH-HHHHHHHHHHhhccc-------------------C--CCHHHHHHHHHHHhcc
Confidence 88999999998644 4 78877654 333222111000000 0 1122223333333
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHH
Q 046506 179 GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESIN 258 (310)
Q Consensus 179 ~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 258 (310)
+.+.+++..++..++.+++.+.|.++ ++++..+.....+.+.+.. + ..++.+.|.
T Consensus 271 ~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~-~-----------------------~~~~~~~l~ 325 (370)
T 2z61_A 271 TEREINSMIKEFDRRRRLVLKYVKDF-GWEVNNPIGAYYVFPNIGE-D-----------------------GREFAYKLL 325 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCBTTEECCBCSS-C-----------------------HHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHc-CCeecCCCcceEEEEecCC-C-----------------------HHHHHHHHH
Confidence 34567788888999999999999887 7776533223233333322 1 135666675
Q ss_pred -hcCcEEEEEe-EEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 259 -ASGKAYMTHA-VLG--GIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 259 -~~g~~~~~~~-~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
+.|. .+.+. ... +.+++|++++ +++++++.+++.|++++
T Consensus 326 ~~~gi-~v~~g~~f~~~~~~~~Ri~~~---~~~~~i~~~~~~l~~~l 368 (370)
T 2z61_A 326 KEKFV-ALTPGIGFGSKGKNYIRISYA---NSYENIKEGLERIKEFL 368 (370)
T ss_dssp HHHCE-ECEEGGGGCGGGSSBEEEECC---SCHHHHHHHHHHHHHHH
T ss_pred HhCCE-EEeCchhhCCCCCCEEEEEEe---CCHHHHHHHHHHHHHHH
Confidence 5664 44332 111 3568999955 58899999999998765
No 148
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.67 E-value=2e-15 Score=138.25 Aligned_cols=251 Identities=11% Similarity=0.096 Sum_probs=145.1
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
...|.. ++++|++++ ++.+|+++|+++|++. +.+|+++ +++|...|+++|+++|++||+++|+|++|
T Consensus 98 ~~~g~~---~~~~~~~~~-~~~~d~~~l~~~i~~~------~~~v~~~---~~~g~~~~~~~i~~l~~~~~~~li~D~a~ 164 (390)
T 3b8x_A 98 QQYGLR---VKFVDIDIN-TLNIDIESLKEAVTDS------TKAILTV---NLLGNPNNFDEINKIIGGRDIILLEDNCE 164 (390)
T ss_dssp HHTTCE---EEEECBCTT-TCSBCHHHHHHHCCTT------EEEEEEE---CGGGCCCCHHHHHHHHTTSCCEEEEECTT
T ss_pred HHcCCE---EEEEecCcc-ccCcCHHHHHHHhCcC------CeEEEEE---CCccChhhHHHHHHHHHHcCCEEEEECcC
Confidence 345665 899999875 4689999999999753 3455554 35788899999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeee--cccccccccceEEEEEeCchhHHhhhccC-Cccccccccc-----cccccCC
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLN--AHKWFFTTLDCCCLWVKDPSDLVNSLSTN-PEYLKNKATE-----SKQVVDY 155 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~--~hK~l~~p~g~g~l~v~~~~~~~~~~~~~-~~y~~~~~~~-----~~~~~~~ 155 (310)
+.+..... . ..+. ..|..+++ .+|.++++.| |+++.+++.......... ..+....... ......+
T Consensus 165 ~~g~~~~~--~--~~g~-~~~~~~~s~~~~k~~~~g~g-G~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 238 (390)
T 3b8x_A 165 SMGATFNN--K--CAGT-FGLMGTFSSFYSNHIATMEG-GCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQF 238 (390)
T ss_dssp CTTCEETT--E--ETTS-SSSEEEEECCTTSSSCSSSC-EEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTT
T ss_pred cccCEECC--c--cccc-ccceEEEEccCCCCCccCCc-eEEEeCCHHHHHHHHHHHhcCCCcccccccccccccccccc
Confidence 86655421 1 1111 13444433 3444555555 777776644322211100 0100000000 0000000
Q ss_pred -CCcee-ccCCC--cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC-CceE--EEEEEcCC-cc
Q 046506 156 -KDWQI-TLSRR--FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR-HFAV--VCFRVSPS-AV 227 (310)
Q Consensus 156 -~~~~~-~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-~~~~--v~~~~~~~-~~ 227 (310)
..+.+ ..|.+ ...+..+.++.. .+.++++.++..++++++.+.|+++|++++..++ ..+. +.+.+.+. ..
T Consensus 239 ~~~~~~~~~g~~~~~~~~~aa~~l~~--l~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 316 (390)
T 3b8x_A 239 EESFKFVLPGYNVRPLEMSGAIGIEQ--LKKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFSFIIKKDSGV 316 (390)
T ss_dssp TSSSCBCSCCCBCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEECTTSCC
T ss_pred ccccceeccccccCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccEEEEEEecCcCcc
Confidence 00111 11222 233444444443 3677889999999999999999999999886542 3333 34444421 00
Q ss_pred hhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEE---Ee---E---EC----------------CEeEEEEEccC
Q 046506 228 MDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMT---HA---V---LG----------------GIYAIRFAAGA 282 (310)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~---~---~~----------------~~~~iRis~~~ 282 (310)
+ ..++.+.|.+.|..... +. . .. ....||+++.
T Consensus 317 --------------~-------~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~- 374 (390)
T 3b8x_A 317 --------------I-------RKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNH- 374 (390)
T ss_dssp --------------C-------HHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECC-
T ss_pred --------------c-------HHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCC-
Confidence 0 13566666666643221 00 0 00 0147999955
Q ss_pred CCCCHHHHHHHHHHH
Q 046506 283 TLTEERHVMVAWTVV 297 (310)
Q Consensus 283 ~~~t~edi~~li~~l 297 (310)
+.+|++||++++++|
T Consensus 375 ~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 375 QIELFDEIDYLREVL 389 (390)
T ss_dssp SSCCHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHhh
Confidence 789999999999886
No 149
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.67 E-value=2.7e-15 Score=137.54 Aligned_cols=215 Identities=11% Similarity=0.052 Sum_probs=136.3
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
.|+++|+++|++. +.+|+++..++++|.+.| +++|+++|++||+++++|++|++.............++
T Consensus 173 ~d~~~l~~~i~~~------~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~- 245 (395)
T 1vef_A 173 NDVEALKRAVDEE------TAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGI- 245 (395)
T ss_dssp TCHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-
T ss_pred CcHHHHHHHhccC------EEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCC-
Confidence 5899999998743 457777777778998877 99999999999999999999984221111100001122
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
.+|++ +.||+++++.++|+++++++ .+ +.+... .+.. ++. .-......+.++++.+..
T Consensus 246 ~~d~~--s~sK~~~~g~~~G~~~~~~~-~~-~~l~~~-~~~~---------------~~~-~~~~~~~a~~~al~~~~~- 303 (395)
T 1vef_A 246 VPDIL--TLAKALGGGVPLGVAVMREE-VA-RSMPKG-GHGT---------------TFG-GNPLAMAAGVAAIRYLER- 303 (395)
T ss_dssp CCSEE--EECGGGGTTSSCEEEEEEHH-HH-HTSCTT-SSCC---------------SST-TCHHHHHHHHHHHHHHHH-
T ss_pred CCCEE--EEcccccCCCceEEEEehHH-HH-hhhccC-CcCC---------------CcC-CCHHHHHHHHHHHHHHHh-
Confidence 36876 55999998888999988755 33 322110 0000 000 001122333344443322
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCC--eEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHH-
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSDKR--FEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESIN- 258 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~~~--~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~- 258 (310)
+++.++..++++++.+.|++++. +... ++..+++.+.+.... .++.+.|.
T Consensus 304 --~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~g~~~~~~~~~~~------------------------~~l~~~l~~ 356 (395)
T 1vef_A 304 --TRLWERAAELGPWFMEKLRAIPSPKIREV-RGMGLMVGLELKEKA------------------------APYIARLEK 356 (395)
T ss_dssp --HTTHHHHHHHHHHHHHHHHTSCCTTEEEE-EEETTEEEEEESSCS------------------------HHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHHHHHHhhcCceEEE-EEEEEEEEEEEcChH------------------------HHHHHHHHH
Confidence 45677888899999999987632 2111 234456777665321 35667776
Q ss_pred hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 259 ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 259 ~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
+.|. .+.+. +.+++|++++ +.++++++++++++|++++
T Consensus 357 ~~gi-~v~~~---~~~~iRi~~~-~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 357 EHRV-LALQA---GPTVIRFLPP-LVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp HHCE-ECEES---STTEEEECCC-TTCCHHHHHHHHHHHHHHH
T ss_pred HCCe-EEecC---CCCEEEEeCC-CCCCHHHHHHHHHHHHHHh
Confidence 6664 44432 4578999955 6799999999999998764
No 150
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.66 E-value=1.6e-15 Score=137.92 Aligned_cols=211 Identities=11% Similarity=0.082 Sum_probs=134.0
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
.|+++|+++|++. +.+|++++.+|++|.+.| +++|+++|++||+++++|++|+..............+.
T Consensus 160 ~d~~~l~~~l~~~------~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~- 232 (375)
T 2eh6_A 160 NDIDSVYKLLDEE------TAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNL- 232 (375)
T ss_dssp TCHHHHHTTCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-
T ss_pred chHHHHHHHhcCC------eEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCC-
Confidence 5889999988643 557888888899999988 99999999999999999999984321111010001111
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
.+|++++| |+++++.++|+++++++ .. +.+... .+.. ..+. ..+...++...+.
T Consensus 233 ~~d~~s~S--K~~~~g~~~G~~~~~~~-~~-~~~~~~-~~~~-----------------~~~~--~~~~~~~~~~~l~-- 286 (375)
T 2eh6_A 233 KPDVIALA--KGLGGGVPIGAILAREE-VA-QSFTPG-SHGS-----------------TFGG--NPLACRAGTVVVD-- 286 (375)
T ss_dssp CCSEEEEC--GGGGTTSCCEEEEEEHH-HH-TTCCTT-SCCC-----------------SSTT--CHHHHHHHHHHHH--
T ss_pred CCCEEEEc--ccccCCCCeEEEEEcHH-HH-hhhcCC-CCCC-----------------CCCC--CHHHHHHHHHHHH--
Confidence 37888766 99988888999988753 33 222110 0000 0011 1222222222221
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcC
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASG 261 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 261 (310)
..++..++..++++++.+.|++++...+ ++..+++.+.+.... .++.+.|.++|
T Consensus 287 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~g~~~~~~~~~~~------------------------~~~~~~l~~~g 340 (375)
T 2eh6_A 287 EVEKLLPHVREVGNYFKEKLKELGKGKV--KGRGLMLGLELEREC------------------------KDYVLKALEKG 340 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSSEE--EEETTEEEEECSSCC------------------------HHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCc--eEEEEEEEEEEcCcH------------------------HHHHHHHHHCC
Confidence 1126778888899999999988754222 234556666654321 35666676766
Q ss_pred cEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 262 KAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 262 ~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
. .+.+. +.+.+|++++ +.++++|+++++++|+++
T Consensus 341 i-~~~~~---~~~~iRi~~~-~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 341 L-LINCT---AGKVLRFLPP-LIIQKEHIDRAISVLREI 374 (375)
T ss_dssp E-ECEEE---TTTEEEECCC-TTCCHHHHHHHHHHHHHH
T ss_pred C-EEecC---CCCEEEEECC-CCCCHHHHHHHHHHHHHh
Confidence 4 43332 3568999965 579999999999999875
No 151
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.66 E-value=9.5e-16 Score=142.77 Aligned_cols=246 Identities=14% Similarity=0.116 Sum_probs=141.6
Q ss_pred EEEEecCC-CC--CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEeecccccc
Q 046506 13 FRAIKTTK-SS--SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVDAAYAGS 86 (310)
Q Consensus 13 v~~v~~~~-~~--~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD~a~~~~ 86 (310)
++.+++++ ++ .+.+|+++|++++...+. .+.+|++++++|++|.+.| +++|+++|++||+++|+|++|+.+
T Consensus 175 ~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~ 251 (444)
T 3if2_A 175 IDEVTHDGEEGFFKYRVDFEALENLPALKEG---RIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMP 251 (444)
T ss_dssp EEEEEETTEEEEEEEECCHHHHHTCHHHHTT---CEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTT
T ss_pred EEecccccccCccccCCCHHHHHHHHHhcCC---CceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCc
Confidence 67777764 11 247999999999643211 2557888888999999999 889999999999999999999743
Q ss_pred cccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCc
Q 046506 87 ACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRF 166 (310)
Q Consensus 87 ~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (310)
..... +........+.++++.|+||++....++|+++. ++............+... +...
T Consensus 252 ~~~~~-~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~-~~~l~~~~~~~~~~~~~~------------------~~~~ 311 (444)
T 3if2_A 252 FPNII-YSDAHLNWDNNTILCFSLSKIGLPGMRTGIIVA-DAKVIEAVSAMNAVVNLA------------------PTRF 311 (444)
T ss_dssp TTCCB-CSCCCCCCCTTEEEEEESTTTTCGGGCCEEEEC-CHHHHHHHHHHHHHHHSS------------------CCCH
T ss_pred ccccc-cccccccCCCCEEEEechhhccCCCCceEEEEE-CHHHHHHHHHHHHhccCC------------------CChH
Confidence 21111 111111122467889999998554466776654 443332221100000000 0011
Q ss_pred chHHHHHHHHHhCH-HHHHH-HHHHHHHHHHHHHHHHcC-CC--CeEEecCCCceEEEEEEcCCcchhhhhhhhccccch
Q 046506 167 RSLKLWFVLRNYGV-ANLRH-FLRSHVNMAKLFERLVGS-DK--RFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLS 241 (310)
Q Consensus 167 ~~~~~~~~l~~~~~-~~~~~-~~~~~~~~a~~l~~~L~~-~~--~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
....+...++.... ....+ +.++..++.+.+.+.|.+ ++ ++.+..+.....+.+.+.....
T Consensus 312 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~-------------- 377 (444)
T 3if2_A 312 GAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLPI-------------- 377 (444)
T ss_dssp HHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCSS--------------
T ss_pred HHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCCCC--------------
Confidence 11222222221111 11122 344455556666666644 34 4666544455566666654110
Q ss_pred hHHHHHHHHHHHHHHHHhcCcEEEEEeEE---C--------CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 242 EEERINEFNRELLESINASGKAYMTHAVL---G--------GIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 242 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~--------~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
+ ..++.+.|.+.|. .+.+... . ..+.+|+|++ . ++++|+.+++.|++++.++.+
T Consensus 378 ~-------~~~l~~~l~~~gi-~v~~g~~~~~~~~~~~~~~~~~~iRis~~-~--~~e~i~~~l~~l~~~~~~~~~ 442 (444)
T 3if2_A 378 S-------TLDLYERLKAKGT-LIVPSEYFFPGVDVSDYQHAHECIRMSIA-A--DEQTLIDGIKVIGEVVRELYD 442 (444)
T ss_dssp C-------HHHHHHHHHHTTE-ECEEGGGSCTTCCCTTCSGGGSEEEEESS-S--CHHHHHHHHHHHHHHHHHHHT
T ss_pred C-------HHHHHHHHHHCCe-EEecchhhcCCCCCcccccCCCeEEEEEe-C--CHHHHHHHHHHHHHHHHHHHc
Confidence 0 1356677777774 4443211 1 1268999966 2 899999999999999987754
No 152
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.66 E-value=2.3e-15 Score=138.13 Aligned_cols=159 Identities=15% Similarity=0.169 Sum_probs=109.0
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+..|+. ++++|. .|+++|+++|+++ +.+|++++++|++|.+.|+++|+++|++||+++++|++|
T Consensus 120 ~~~g~~---~~~v~~-------~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~ 183 (389)
T 3acz_A 120 PRFGIE---VDLIDT-------SDVEKVKAAWKPN------TKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATF 183 (389)
T ss_dssp HHTTCE---EEEECT-------TCHHHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTT
T ss_pred HHcCCE---EEEECC-------CCHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCC
Confidence 345665 666665 3789999998754 458888999999999999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceec
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
+.+....+. . .++|+++.|+||++++|.+ +|+++.++++.+....... .+..
T Consensus 184 ~~~~~~~~~-----~--~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~-~~~g------------------ 237 (389)
T 3acz_A 184 TSPCFLKPL-----E--LGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYR-KDAG------------------ 237 (389)
T ss_dssp TCTTTCCGG-----G--TTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHH-HHHC------------------
T ss_pred ccccccCcc-----c--cCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHH-HhcC------------------
Confidence 766532211 1 2589999999999999987 6888777623433221100 0000
Q ss_pred cCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeE
Q 046506 162 LSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFE 208 (310)
Q Consensus 162 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~ 208 (310)
+ .......|.+++.+ +.+..++++..++++.+.+.|++.+.+.
T Consensus 238 -~-~~~~~~~~~~~~~l--~~l~~r~~~~~~~~~~l~~~l~~~~~v~ 280 (389)
T 3acz_A 238 -S-LMAPMDAFLCARGM--KTLPIRMQIHMENGLKVAKFLEQHEKIV 280 (389)
T ss_dssp -C-CCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHCTTEE
T ss_pred -C-CCCHHHHHHHHcCc--cHHHHHHHHHHHHHHHHHHHHHcCCCee
Confidence 0 01223344444433 3455667777888888888888776554
No 153
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.66 E-value=8.7e-16 Score=143.95 Aligned_cols=241 Identities=12% Similarity=0.046 Sum_probs=138.0
Q ss_pred cccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcc-cccC---ChHHHHHHHHHhCcEEEeeccccc-ccc---------c
Q 046506 24 YGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAI-TAVD---TLKPLCDVAKQFGIWVHVDAAYAG-SAC---------I 89 (310)
Q Consensus 24 ~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~-G~~~---pl~~I~~l~~~~g~~l~vD~a~~~-~~~---------~ 89 (310)
+.+|+++|+++|++... ..+.+|+++..+|++ |.+. ++++|+++|++||+++|+|++|+. +.+ .
T Consensus 165 ~~~d~~~Le~~i~~~~~--~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~ 242 (467)
T 2oqx_A 165 GNFDLEGLERGIEEVGP--NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYK 242 (467)
T ss_dssp TCBCHHHHHHHHHHHCG--GGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGT
T ss_pred CCcCHHHHHHHHHhcCC--CceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhccccccccc
Confidence 57999999999986310 014467777777776 7654 488999999999999999998866 322 0
Q ss_pred Chhhhhhh-cCCCCCCeeeeecccccccccceEEEEEeCc---hhHHhhhccCCccc-cccccccccccCCCCceeccCC
Q 046506 90 CPEFRHFI-DGVEGADSFSLNAHKWFFTTLDCCCLWVKDP---SDLVNSLSTNPEYL-KNKATESKQVVDYKDWQITLSR 164 (310)
Q Consensus 90 ~~~~~~~~-~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~---~~~~~~~~~~~~y~-~~~~~~~~~~~~~~~~~~~~~~ 164 (310)
........ .....+|++++++||+++.|.| |+++.+++ +.+.+.. .+. ...+. .+.+.
T Consensus 243 g~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~~~~~~~~~~~~~----~~~~~~~~~------------~~~~~ 305 (467)
T 2oqx_A 243 DWTIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCMKDDSFFDVYTECR----TLCVVQEGF------------PTYGG 305 (467)
T ss_dssp TSCHHHHHHHHGGGCSEEEEESSSTTCCSSC-EEEEECSGGGHHHHHHHH----HHHHHTTSS------------CCCCC
T ss_pred CccHHHHhhhhhccCCeEEEecccccCCCCc-eEEEecChhHHHHHHHHH----HhhhccCCc------------ccccc
Confidence 10011100 0012478899999999988855 55555544 2222211 111 00000 00111
Q ss_pred CcchHHHHHHHHHhCHHHH-HHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcC--Ccchhhhhhhhccccch
Q 046506 165 RFRSLKLWFVLRNYGVANL-RHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSP--SAVMDKLKTKYENSLLS 241 (310)
Q Consensus 165 ~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~ 241 (310)
. .+.+ .+++...-.+.+ ++.+++..++++++.+.|.++ ++++. +....++.+.+.. ...
T Consensus 306 ~-~~~~-~~al~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~~~~~-------------- 367 (467)
T 2oqx_A 306 L-EGGA-MERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEI-GVVCQ-QAGGHAAFVDAGKLLPHI-------------- 367 (467)
T ss_dssp C-CHHH-HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT-TCCEE-EECSSCEEEEHHHHSTTS--------------
T ss_pred h-hhhH-HHHHHHhhHhhhhHHHHHHHHHHHHHHHHHHHHC-CCeee-cCCceEEEEechhhcccC--------------
Confidence 1 1111 112211101112 234556677888999999887 77776 5555666666531 100
Q ss_pred hHHHHHHH-HHHHHHHH-HhcCcEEEEEeEE-------------CCEeEEEEEccCCC-CCHHHHHHHHHHHHHHHHHHh
Q 046506 242 EEERINEF-NRELLESI-NASGKAYMTHAVL-------------GGIYAIRFAAGATL-TEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 242 ~~~~~~~~-~~~l~~~l-~~~g~~~~~~~~~-------------~~~~~iRis~~~~~-~t~edi~~li~~l~~~~~~~~ 305 (310)
+. ..+ ...+.+.| .+.|......... .+.+.+|++++ .. ++++||+.++++|++++..+.
T Consensus 368 ~~---~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~-~~~~t~e~i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 368 PA---DQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIP-RATYTQTHMDFIIEAFKHVKENAA 443 (467)
T ss_dssp CG---GGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCC-TTTSCHHHHHHHHHHHHHHHHSGG
T ss_pred Cc---ccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEec-CCCCCHHHHHHHHHHHHHHHhhhh
Confidence 00 111 24566777 6677443321210 01378999966 56 899999999999999887643
No 154
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.65 E-value=2.4e-14 Score=132.33 Aligned_cols=248 Identities=9% Similarity=0.030 Sum_probs=141.2
Q ss_pred EEEEecCC---CCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeeccccc
Q 046506 13 FRAIKTTK---SSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAG 85 (310)
Q Consensus 13 v~~v~~~~---~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~ 85 (310)
++.+|.+. ++.+.+|+++|+++|++.. .+..+.+|+++...+++|.+.| +++|+++|++||+++++|++|++
T Consensus 166 v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~ 244 (426)
T 1sff_A 166 VYRALYPCPLHGISEDDAIASIHRIFKNDA-APEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSG 244 (426)
T ss_dssp EEEECCCBGGGTBCHHHHHHHHHHHHHHTC-CGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred cEEeCCCccccccchHHHHHHHHHHHHhcc-CCCceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhc
Confidence 77788753 1124589999999997410 0002446666554444997777 99999999999999999999984
Q ss_pred ccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC
Q 046506 86 SACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR 165 (310)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 165 (310)
.........-...++ .+|++ +.+|+++....+|+++++++ .+ +.+... .+.. ++ ..-.
T Consensus 245 ~~~~g~~~~~~~~~~-~~di~--s~sK~~~~GlriG~~~~~~~-~~-~~l~~~-~~~~---------------~~-~~~~ 302 (426)
T 1sff_A 245 AGRTGTLFAMEQMGV-APDLT--TFAKSIAGGFPLAGVTGRAE-VM-DAVAPG-GLGG---------------TY-AGNP 302 (426)
T ss_dssp TTTTSSSSGGGGTTS-CCSEE--EECGGGGTSSCCEEEEEEHH-HH-TTSCTT-SBCC---------------SS-SSCH
T ss_pred cCcccchhhhhhcCC-CCCEE--EEcccccCCCceEEEEEcHH-HH-hhhccC-CcCc---------------CC-CCCH
Confidence 322111110001111 36765 56799885233688887653 33 222100 0000 00 0001
Q ss_pred cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcC----CCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccch
Q 046506 166 FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGS----DKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLS 241 (310)
Q Consensus 166 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~----~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
....++.++++.+.. ++..++..++.+++++.|.+ ++.+... ++..+++.+.+.+... ...+
T Consensus 303 ~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~---------~~~~- 368 (426)
T 1sff_A 303 IACVAALEVLKVFEQ---ENLLQKANDLGQKLKDGLLAIAEKHPEIGDV-RGLGAMIAIELFEDGD---------HNKP- 368 (426)
T ss_dssp HHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHTCTTEEEE-EEETTEEEEEEBGGGC---------TTSB-
T ss_pred HHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEEecCcc---------ccCC-
Confidence 222334445554422 24556667777777777764 4444333 2346677777753100 0000
Q ss_pred hHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 242 EEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 242 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
. .....++.+.|.++|. .+.+... ..+++|++++ +.++++++++++++|++++..+
T Consensus 369 ~----~~~~~~l~~~l~~~gi-~v~~~~~-~~~~iRi~~~-~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 369 D----AKLTAEIVARARDKGL-ILLSCGP-YYNVLRILVP-LTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp C----HHHHHHHHHHHHHTTE-ECEEEST-TSCEEEECCC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred C----hHHHHHHHHHHHHCCc-EEecCCC-CCCEEEEECC-ccCCHHHHHHHHHHHHHHHHHH
Confidence 0 1122467777777774 4443321 2568999965 5789999999999999988765
No 155
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.65 E-value=9.4e-16 Score=140.45 Aligned_cols=238 Identities=11% Similarity=0.010 Sum_probs=147.5
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHH---HHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKP---LCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~---I~~l~~~~g~~l~v 79 (310)
+...|.. ++.+|.+++ .+.+|+++|++++++. +.++++++++|++|.+.|.++ |+++|++||+++++
T Consensus 137 ~~~~g~~---~~~v~~~~~-g~~~d~~~l~~~~~~~------~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 206 (396)
T 3jtx_A 137 TLLGGGE---IHFANCPAP-SFNPDWRSISEEVWKR------TKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIAS 206 (396)
T ss_dssp HHHTTCE---EEEEECCTT-TCCCCGGGSCHHHHHT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEE
T ss_pred HHHcCCE---EEEeecCCC-CCccCHHHHHHhhccC------cEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 3456776 899999654 4678999999999874 457777888999999987665 99999999999999
Q ss_pred ecccccccccChhhhhhh------cCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccc
Q 046506 80 DAAYAGSACICPEFRHFI------DGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQV 152 (310)
Q Consensus 80 D~a~~~~~~~~~~~~~~~------~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~ 152 (310)
|++|+.+........... ......+++..|++|.++.| ..+|+++. ++.......... .+..
T Consensus 207 De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~-~~~~--------- 275 (396)
T 3jtx_A 207 DECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAG-DAELLKNFLLYR-TYHG--------- 275 (396)
T ss_dssp ECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEE-CHHHHHHHHHHH-HHHT---------
T ss_pred EccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEe-CHHHHHHHHHHH-hhcc---------
Confidence 999976543221000000 00124678889999976544 45677654 454432221100 0000
Q ss_pred cCCCCceeccCCC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhh
Q 046506 153 VDYKDWQITLSRR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKL 231 (310)
Q Consensus 153 ~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~ 231 (310)
.+.+ .....+.++++ ..+.+++..++..++.+++.+.|.+. +.+..+....++.+.+...+
T Consensus 276 ---------~~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~----- 337 (396)
T 3jtx_A 276 ---------SAMSIPVQRASIAAWD--DEQHVIDNRRLYQEKFERVIPILQQV--FDVKLPDASFYIWLKVPDGD----- 337 (396)
T ss_dssp ---------CCCCHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHHHTTT--SCCCCCSSSSEEEEECTTSC-----
T ss_pred ---------cCCCHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHHHhc--CCccCCCeeEEEEEECCCCC-----
Confidence 0000 11222233333 24567888888999999999999875 33333333445555554311
Q ss_pred hhhhccccchhHHHHHHHHHHHHHHHHh-cCcEEEEEeEE---------CCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 232 KTKYENSLLSEEERINEFNRELLESINA-SGKAYMTHAVL---------GGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~---------~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
..++.+.|.+ .|. .+.+... .+.+++|+|++. ++++++.+++.|++++
T Consensus 338 ------------------~~~~~~~l~~~~gi-~v~~g~~~~~~~~~~~~~~~~iRis~~~---~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 338 ------------------DLAFARNLWQKAAI-QVLPGRFLARDTEQGNPGEGYVRIALVA---DVATCVKAAEDIVSLY 395 (396)
T ss_dssp ------------------HHHHHHHHHHHHCE-ECEEGGGGCCCCTTCCTTTTEEEEECCS---CHHHHHHHHHHHHHHC
T ss_pred ------------------HHHHHHHHHHHCCE-EEeCChHhCCcccccCCCCCeEEEEEcC---CHHHHHHHHHHHHHHh
Confidence 1345566644 464 4443211 235799999652 8999999999998753
No 156
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.65 E-value=7.2e-16 Score=139.65 Aligned_cols=228 Identities=13% Similarity=0.103 Sum_probs=145.9
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+..|.. ++.+|.+++ +.+ +++++.+ .+.++++++++|++|.+.|+++|.++|+++|+++++|++|
T Consensus 124 ~~~g~~---~~~v~~~~~--~~~--~~l~~~~--------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~ 188 (360)
T 3hdo_A 124 EVQGAR---VRTFGLTGD--FRI--AGFPERY--------EGKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETY 188 (360)
T ss_dssp HHHTCE---EEEECBCTT--SSB--TTCCSSB--------CSSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTT
T ss_pred HHCCCE---EEEeeCCCC--CCH--HHHHhhc--------CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECCh
Confidence 445666 888998753 344 4443332 1337888889999999999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceecc
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITL 162 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 162 (310)
+.+.... ....... ...++++.|++|+++.| .++|+++. ++............| .
T Consensus 189 ~~~~~~~--~~~~~~~-~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~~~~----~---------------- 244 (360)
T 3hdo_A 189 AEFAESN--ALELVRR-HENVVVTRTLSKSYSLAGMRIGLAIA-RPEVIAALDKIRDHY----N---------------- 244 (360)
T ss_dssp GGGSSCC--CTHHHHH-CSSEEEEEESTTTTSCTTSCCEEEEC-CHHHHHHHHHHSCSC----C----------------
T ss_pred HhhCCcc--hhHHhcc-CCCEEEEecchHhhcCCccceeeEee-CHHHHHHHHHhCCCC----C----------------
Confidence 7532111 0011111 13457788999998744 45677765 444433221111110 0
Q ss_pred CCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchh
Q 046506 163 SRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSE 242 (310)
Q Consensus 163 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 242 (310)
.-......+.++++ ..+.++++.++..++.+++.+.|.++ ++.+. ++..+.+.+.+.+.+
T Consensus 245 ~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~~---------------- 304 (360)
T 3hdo_A 245 LDRLAQAACVAALR--DQAYLSECCRRIRETREWFTTELRSI-GYDVI-PSQGNYLFATPPDRD---------------- 304 (360)
T ss_dssp SCHHHHHHHHHHHH--CHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEC-CCSSSEEEEECTTCC----------------
T ss_pred CCHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEc-CCCccEEEEECCCCC----------------
Confidence 00012223333343 24567888999999999999999987 88875 556666666554321
Q ss_pred HHHHHHHHHHHHHHHHhcCcEEEEEeE-ECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 243 EERINEFNRELLESINASGKAYMTHAV-LGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 243 ~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
..++.+.|.+.|. .+.+.. ....+++|+|+. +++|+++++++|+++.+
T Consensus 305 -------~~~l~~~l~~~gi-~v~~~~~~~~~~~iRis~~----~~~e~~~l~~al~~~~~ 353 (360)
T 3hdo_A 305 -------GKRVYDGLYARKV-LVRHFSDPLLAHGMRISIG----TREEMEQTLAALKEIGE 353 (360)
T ss_dssp -------HHHHHHHHHHTTE-ECBCCCSTTTTTSEEEECC----CHHHHHHHHHHHHHHHC
T ss_pred -------HHHHHHHHHHCCE-EEEECCCCCCCCEEEEEcC----CHHHHHHHHHHHHHHhc
Confidence 1356677777774 443321 223578999944 78999999999998764
No 157
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.65 E-value=2.5e-16 Score=143.20 Aligned_cols=242 Identities=12% Similarity=0.120 Sum_probs=144.8
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+...|.. +++++++++ .+.+|+++|+++|++. +.+|+ .++++|...|+++|.++|++||+++++|++
T Consensus 92 ~~~~G~~---~~~~~~~~~-~~~~d~~~l~~~i~~~------~~~v~---~~~~~G~~~~~~~i~~la~~~~~~li~D~a 158 (367)
T 3nyt_A 92 VALLGAK---PVYVDIDPR-TYNLDPQLLEAAITPR------TKAII---PVSLYGQCADFDAINAIASKYGIPVIEDAA 158 (367)
T ss_dssp HHHTTCE---EEEECBCTT-TCSBCGGGTGGGCCTT------EEEEC---CBCGGGCCCCHHHHHHHHHHTTCCBEEECT
T ss_pred HHHcCCE---EEEEecCCc-cCCcCHHHHHHhcCcC------CcEEE---eeCCccChhhHHHHHHHHHHcCCEEEEECc
Confidence 3456776 899999875 4689999999999653 33444 556889999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeee--cccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLN--AHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~--~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
|+.+...... ..+. ..|++++| +||+++++...|+++.+++.......... . .... ..+.....
T Consensus 159 ~~~g~~~~~~----~~~~-~~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~-~---~g~~-----~~~~~~~~ 224 (367)
T 3nyt_A 159 QSFGASYKGK----RSCN-LSTVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIA-R---HGQD-----RRYHHIRV 224 (367)
T ss_dssp TTTTCEETTE----ETTS-SSSEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHT-B---TTEE-----ETTEECSC
T ss_pred cccCCeECCe----eccC-CCCEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHH-h---cCCC-----cCceeecc
Confidence 9765542211 1111 12888888 59999864445666665554432221111 0 0000 00000000
Q ss_pred ccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC-----ceEEEEEEcCCcchhhhhhhh
Q 046506 161 TLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH-----FAVVCFRVSPSAVMDKLKTKY 235 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~-----~~~v~~~~~~~~~~~~~~~~~ 235 (310)
..+.+...+..+.++.. .+.+++..++..++++++.+.|.++ ++.+...+. ..++.+....
T Consensus 225 g~~~~~~~~~aa~~~~~--l~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~----------- 290 (367)
T 3nyt_A 225 GVNSRLDTLQAAILLPK--LEIFEEEIALRQKVAAEYDLSLKQV-GIGTPFIEVNNISVYAQYTVRMDN----------- 290 (367)
T ss_dssp CCBCCCCHHHHHHHHHH--HHTHHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTEECCCSSEEEECSS-----------
T ss_pred CcCCCccHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccC-CeeccCCCCCCceeeEEEEEEeCC-----------
Confidence 01112233333333332 3456778888889999999999987 455432221 1223333221
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeE--------EC------------CEeEEEEEccCCCCCHHHHHHHHH
Q 046506 236 ENSLLSEEERINEFNRELLESINASGKAYMTHAV--------LG------------GIYAIRFAAGATLTEERHVMVAWT 295 (310)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~------------~~~~iRis~~~~~~t~edi~~li~ 295 (310)
...+.+.|.++|........ +. ....+|+++. +.+|++||+++++
T Consensus 291 --------------~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~-~~~t~~~i~~v~~ 355 (367)
T 3nyt_A 291 --------------RESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMH-PYLDTASIKIICA 355 (367)
T ss_dssp --------------HHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCC-TTCCHHHHHHHHH
T ss_pred --------------HHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCC-CCCCHHHHHHHHH
Confidence 13566677777753221110 00 1468999944 7899999999999
Q ss_pred HHHHH
Q 046506 296 VVQEH 300 (310)
Q Consensus 296 ~l~~~ 300 (310)
+|++.
T Consensus 356 ~~~~~ 360 (367)
T 3nyt_A 356 ALTNL 360 (367)
T ss_dssp HHHC-
T ss_pred HHHHH
Confidence 99754
No 158
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.65 E-value=2.8e-16 Score=147.50 Aligned_cols=105 Identities=21% Similarity=0.230 Sum_probs=83.1
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+...|+. ++++|.+ |+++|+++|++. +.+|++.+++|++|.+.|+++|+++|++||+++++|++
T Consensus 192 ~~~~G~~---v~~v~~~-------d~~~l~~~i~~~------tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea 255 (464)
T 1ibj_A 192 VPRSGVV---VKRVNTT-------KLDEVAAAIGPQ------TKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNS 255 (464)
T ss_dssp SGGGTCE---EEEECTT-------SHHHHHHHCCSS------EEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECT
T ss_pred HHHcCCE---EEEeCCC-------CHHHHHHHhccC------ceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECC
Confidence 3455665 7777663 789999998643 55888999999999999999999999999999999999
Q ss_pred cccccccChhhhhhhcCCCCCCeeeeecccccccccce--EEEEEeCchh
Q 046506 83 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDC--CCLWVKDPSD 130 (310)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~--g~l~v~~~~~ 130 (310)
|+.+....+. . .++|+++.++||++++|.|+ |+++++++..
T Consensus 256 ~~~g~~~~~~-----~--~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l 298 (464)
T 1ibj_A 256 IMSPVLSRPL-----E--LGADIVMHSATKFIAGHSDVMAGVLAVKGEKL 298 (464)
T ss_dssp TTCTTTCCGG-----G--TTCSEEEEETTTTTTCSSCCCCEEEEECSHHH
T ss_pred CcccccCChh-----h--cCCEEEEECCcccccCCCCCcEEEEEEChHHH
Confidence 9765432121 1 15899999999999998876 8888876544
No 159
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.65 E-value=4e-15 Score=138.30 Aligned_cols=186 Identities=13% Similarity=0.112 Sum_probs=121.7
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
...|+. +++++.+ |+++|+++|++. +.+|++.+++|++|.+.|+++|+++|+++|+++++|+++
T Consensus 143 ~~~G~~---~~~v~~~-------d~~~l~~ai~~~------t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~ 206 (430)
T 3ri6_A 143 PSFGIE---VRFVDVM-------DSLAVEHACDET------TKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTM 206 (430)
T ss_dssp HHTTCE---EEEECTT-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTT
T ss_pred HHcCCE---EEEeCCC-------CHHHHHHhhCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCC
Confidence 345665 7777764 789999999764 458889999999999999999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeeccccccccc-ceEEEEE-eCchhHHh---------hhccCCccccccccccccc
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWV-KDPSDLVN---------SLSTNPEYLKNKATESKQV 152 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~-g~g~l~v-~~~~~~~~---------~~~~~~~y~~~~~~~~~~~ 152 (310)
+.+....+. . .++|+++.|++|++++|. +.|.+++ +.+..+.. .+. ...|+....
T Consensus 207 ~~~~~~~~~----~---~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g-~~~~i~~~~------ 272 (430)
T 3ri6_A 207 TPPYLLEAK----R---LGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAG-PMAFLYKAR------ 272 (430)
T ss_dssp SCTTTCCGG----G---GTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHG-GGHHHHHHH------
T ss_pred cccccCChH----H---cCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhc-hhhHHHHHH------
Confidence 866553221 1 158999999999998762 2344444 33311100 000 000000000
Q ss_pred cCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCC----------------ce
Q 046506 153 VDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRH----------------FA 216 (310)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~----------------~~ 216 (310)
.......+.......+|..++ +.+.+..++++..++++++.+.|++.|+++.+..|. .+
T Consensus 273 ---~~~~~~~g~~~~~~~a~l~l~--~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg 347 (430)
T 3ri6_A 273 ---KEVFQNLGPSLSPHNAYLQSL--GLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAG 347 (430)
T ss_dssp ---HTHHHHHCCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCC
T ss_pred ---HHHHHhcCCCCCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCc
Confidence 000001111223344444443 557788889999999999999999999987544332 44
Q ss_pred -EEEEEEcC
Q 046506 217 -VVCFRVSP 224 (310)
Q Consensus 217 -~v~~~~~~ 224 (310)
+++|.+.+
T Consensus 348 ~~lsf~l~~ 356 (430)
T 3ri6_A 348 SILTFELES 356 (430)
T ss_dssp SEEEEECSS
T ss_pred eEEEEEECC
Confidence 88888873
No 160
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.64 E-value=5.8e-15 Score=139.81 Aligned_cols=264 Identities=12% Similarity=0.065 Sum_probs=155.8
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++.+|.. ++.++++++++|.+|+++|+++|++... ...+.+|+++.++|++|.+.+ +++|+++|++||+++++
T Consensus 198 ~~~~g~~---~v~~~~~~~~~~~~d~~~le~~l~~~~~-~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~ 273 (498)
T 3ihj_A 198 ISELDAI---QVNYYLDEENCWALNVNELRRAVQEAKD-HCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLA 273 (498)
T ss_dssp HHHTTCE---EEEEECBGGGTTBCCHHHHHHHHHHHTT-TSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHcCCE---EEEeeccccccCCCCHHHHHHHHHhhhc-cCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEE
Confidence 3455665 8999998866689999999999987532 112567777888999999866 67799999999999999
Q ss_pred ecccccccccCh----hhhhhhcCC-----CCCC-eeeeecccccc--cccceEEEEE--eCchhHHhhhccCCcccccc
Q 046506 80 DAAYAGSACICP----EFRHFIDGV-----EGAD-SFSLNAHKWFF--TTLDCCCLWV--KDPSDLVNSLSTNPEYLKNK 145 (310)
Q Consensus 80 D~a~~~~~~~~~----~~~~~~~~~-----~~~D-~~~~~~hK~l~--~p~g~g~l~v--~~~~~~~~~~~~~~~y~~~~ 145 (310)
|.+|+.+.+... ........+ .... ++..|++|.+. .....|++.+ .++............+..
T Consensus 274 De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~~~~-- 351 (498)
T 3ihj_A 274 DEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLC-- 351 (498)
T ss_dssp ECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHHHSCC--
T ss_pred EcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHhccCC--
Confidence 999976554321 111111000 0122 34569999984 2345666654 455443222111000000
Q ss_pred ccccccccCCCCceeccCCCcchHHHHHHHHHhC------------HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC
Q 046506 146 ATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYG------------VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR 213 (310)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~ 213 (310)
......++....+. .....++.++..++++++.+.|.++|++++. ++
T Consensus 352 --------------------~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~-~p 410 (498)
T 3ihj_A 352 --------------------PPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCN-PL 410 (498)
T ss_dssp --------------------CCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECC-CC
T ss_pred --------------------CCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEec-CC
Confidence 01111122222221 1234566788889999999999998998876 45
Q ss_pred CceEEEE-EEcCCcchhhhhhhhccccchhHHHHHHHHHH--HHHHHHhcCcEEEEEeE---ECCEeEEEEEccCCCCCH
Q 046506 214 HFAVVCF-RVSPSAVMDKLKTKYENSLLSEEERINEFNRE--LLESINASGKAYMTHAV---LGGIYAIRFAAGATLTEE 287 (310)
Q Consensus 214 ~~~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~l~~~g~~~~~~~~---~~~~~~iRis~~~~~~t~ 287 (310)
..+++.| .+..+.- ...+... ......+ +.+.+.+.|.....+.. ..+...+|+++. .++
T Consensus 411 ~gg~~~~~~l~~p~~--~~~~~~~---------~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~---~~~ 476 (498)
T 3ihj_A 411 QGAMYAFPRIFIPAK--AVEAAQA---------HQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTIL---PPV 476 (498)
T ss_dssp CBSSEECCEECCCHH--HHHHHHH---------TTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECC---SCH
T ss_pred CeEEEEEEeccCchh--hhHHHHh---------cCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeC---CCH
Confidence 5555544 3432100 0000000 0000012 23445556755444322 134678999963 689
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q 046506 288 RHVMVAWTVVQEHLEALLSA 307 (310)
Q Consensus 288 edi~~li~~l~~~~~~~~~~ 307 (310)
++++.+++.|+++++++.++
T Consensus 477 e~l~~~i~~L~~~~~~~~~~ 496 (498)
T 3ihj_A 477 EKLKTVLQKVKDFHINFLEK 496 (498)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999887654
No 161
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.64 E-value=9.7e-15 Score=135.44 Aligned_cols=240 Identities=8% Similarity=-0.053 Sum_probs=142.9
Q ss_pred EEEEecCC----CCCcccCHHHHHHHHHHHHHcCCCcEEEEEecc-CCcccccCC----hHHHHHHHHHhCcEEEeeccc
Q 046506 13 FRAIKTTK----SSSYGLSPDSLMAKINSDVEAGLIPLFLCATIG-TTAITAVDT----LKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 13 v~~v~~~~----~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~-~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~ 83 (310)
+..++.+. +..+.+|+++|+++|++... .+.+|+++.. ++++|.+.| +++|+++|++||+++|+|++|
T Consensus 172 ~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~---~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~ 248 (429)
T 1s0a_A 172 NLFAPAPQSRMDGEWDERDMVGFARLMAAHRH---EIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIA 248 (429)
T ss_dssp CEEECCCCSBC-CCCCGGGGHHHHHHHHHHTT---TEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTT
T ss_pred ceEeCCCcccccccchHHHHHHHHHHHHhCCC---CEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehh
Confidence 56676642 11125899999999975311 2446666666 688998777 999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccC-CccccccccccccccCCCCceec
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTN-PEYLKNKATESKQVVDYKDWQIT 161 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~-~~y~~~~~~~~~~~~~~~~~~~~ 161 (310)
+..........-...++ ..|++++ .|+++++ .++|++++++ +.+....... ..+.... ++.
T Consensus 249 ~~~g~~g~~~~~~~~~~-~~d~~t~--sK~l~~G~~~iG~~~~~~-~~~~~l~~~~~~~~~~~~-------------t~~ 311 (429)
T 1s0a_A 249 TGFGRTGKLFACEHAEI-APDILCL--GKALTGGTMTLSATLTTR-EVAETISNGEAGCFMHGP-------------TFM 311 (429)
T ss_dssp TTTTTTSSSSGGGGGTC-CCSEEEE--CGGGGTSSSCCEEEEECH-HHHHHHHTSTTSSCSCCC-------------TTT
T ss_pred hCCcccchHHHhhhcCC-CCCEEEe--cccccCCCccceEEEeCH-HHHHHhhcCCCcccccCC-------------CCC
Confidence 74322111100001122 3677765 4998876 7889988754 3433221110 0000000 000
Q ss_pred cCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCC---CCeEEecCCCceEEEEEEcCCcchhhhhhhhccc
Q 046506 162 LSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSD---KRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENS 238 (310)
Q Consensus 162 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~---~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 238 (310)
.-.....++.++++.+.. ++..++..++.+++.+.|+++ |++..+ ++..+++.+.+....
T Consensus 312 -~n~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~-~~~g~~~~~~~~~~~------------ 374 (429)
T 1s0a_A 312 -GNPLACAAANASLAILES---GDWQQQVADIEVQLREQLAPARDAEMVADV-RVLGAIGVVETTHPV------------ 374 (429)
T ss_dssp -TCHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHGGGGGCTTEEEE-EEETTEEEEEESSCB------------
T ss_pred -CCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhcCCCEEEE-EEeeEEEEEEECCcc------------
Confidence 001122333344443322 245677778888999998775 566533 223456666665310
Q ss_pred cchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 239 LLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
+ ..++.+.|.++|. .+.+. .+.+|+|++ ..++++|+++++++|++++.+++
T Consensus 375 ---~-------~~~l~~~l~~~Gi-~v~~~----~~~iRis~~-~~~t~e~i~~~~~~l~~~~~~~~ 425 (429)
T 1s0a_A 375 ---N-------MAALQKFFVEQGV-WIRPF----GKLIYLMPP-YIILPQQLQRLTAAVNRAVQDET 425 (429)
T ss_dssp ---C-------HHHHHHHHHHTTE-ECCCB----TTEEEECCC-TTCCHHHHHHHHHHHHHHTSSGG
T ss_pred ---c-------HHHHHHHHHHCCC-EEecc----CCEEEEECC-CCCCHHHHHHHHHHHHHHHHhhh
Confidence 0 1356667777764 44332 268999955 67999999999999998875543
No 162
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.64 E-value=6.2e-15 Score=136.71 Aligned_cols=252 Identities=14% Similarity=0.119 Sum_probs=149.3
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHH------cCCCcEEEEE-eccCCcccccCChH---HHHHHHHH
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVE------AGLIPLFLCA-TIGTTAITAVDTLK---PLCDVAKQ 72 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~------~~~~~~~v~~-~~~~~~~G~~~pl~---~I~~l~~~ 72 (310)
++..|.. ++.+|.+++ .+|+++|++++++... ....+.+|++ .+.+|++|.+.|.+ +|+++|++
T Consensus 149 ~~~~g~~---~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~ 222 (425)
T 2r2n_A 149 LHPLGCN---IINVASDES---GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARK 222 (425)
T ss_dssp HGGGTCE---EEEECEETT---EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred HHHcCCE---EEEeCcCCC---CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHH
Confidence 3456666 889998753 4999999999963110 0012345544 67889999998866 99999999
Q ss_pred hCcEEEeecccccccccChhhhhhh-cCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccc
Q 046506 73 FGIWVHVDAAYAGSACICPEFRHFI-DGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESK 150 (310)
Q Consensus 73 ~g~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~ 150 (310)
||+++++|++|+...+......... ....+.+++..|++|+++ | .-+|+++.+++ .+.........+...
T Consensus 223 ~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~-l~~~l~~~~~~~~~~------ 294 (425)
T 2r2n_A 223 YDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKP-LIERVILHIQVSTLH------ 294 (425)
T ss_dssp TTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEHH-HHHHHHHHHHTTTCS------
T ss_pred cCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCHH-HHHHHHHHHHHhcCC------
Confidence 9999999999975433221100000 011124577899999997 4 23688877644 332221100000000
Q ss_pred cccCCCCceeccCCCcchHHHHHHHHHhCH----HHHHHHHHHHHHHHHHHHHHHcC-CCCeE-EecCCCceEEEEEEcC
Q 046506 151 QVVDYKDWQITLSRRFRSLKLWFVLRNYGV----ANLRHFLRSHVNMAKLFERLVGS-DKRFE-VVFPRHFAVVCFRVSP 224 (310)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~a~~l~~~L~~-~~~~~-v~~~~~~~~v~~~~~~ 224 (310)
.-.+...++..+++..+. +.++++.++..++.+++.+.|.+ +|++. +..+.....+.+.+..
T Consensus 295 ------------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~ 362 (425)
T 2r2n_A 295 ------------PSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKG 362 (425)
T ss_dssp ------------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETT
T ss_pred ------------CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCC
Confidence 000122233334443221 34566667778888889999987 67874 4434445566666654
Q ss_pred CcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEEC-----CEeEEEEEccCCCCCHHHHHHHHHHHHH
Q 046506 225 SAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLG-----GIYAIRFAAGATLTEERHVMVAWTVVQE 299 (310)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-----~~~~iRis~~~~~~t~edi~~li~~l~~ 299 (310)
.. .. . +.+.+.+.+.|.....+.... +.+++|+|++ . .++++++.+++.|++
T Consensus 363 ~~--------------~~----~---~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~-~-~~~~~i~~~~~~l~~ 419 (425)
T 2r2n_A 363 IN--------------DV----K---ELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFS-S-ASPEQMDVAFQVLAQ 419 (425)
T ss_dssp CS--------------CC----H---HHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECS-S-CCHHHHHHHHHHHHH
T ss_pred CC--------------CH----H---HHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeC-C-CCHHHHHHHHHHHHH
Confidence 21 00 1 124556666665443322221 2478999966 2 689999999999998
Q ss_pred HHHH
Q 046506 300 HLEA 303 (310)
Q Consensus 300 ~~~~ 303 (310)
++++
T Consensus 420 ~l~~ 423 (425)
T 2r2n_A 420 LIKE 423 (425)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8765
No 163
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.63 E-value=1.1e-15 Score=138.98 Aligned_cols=234 Identities=13% Similarity=0.007 Sum_probs=144.7
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD 80 (310)
+..|.. ++.+|.++++ .+++ +|++++.+. +.++++++++|++|.+.| +++|+++|++||+++++|
T Consensus 126 ~~~g~~---~~~~~~~~~~--~~~~-~l~~~~~~~------~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 193 (376)
T 3ezs_A 126 KFIKAK---SLLMPLTKEN--DFTP-SLNEKELQE------VDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILIND 193 (376)
T ss_dssp HHTTCE---EEEEECCGGG--TSCC-CCCHHHHHH------CSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHcCCE---EEEcccCCCC--Ccch-hHHhhhccC------CCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEE
Confidence 445666 8899988653 4555 788888764 347777888999999987 667888899999999999
Q ss_pred cccccccccChhhh--hhhc----CCCCCCeeeeecccccc-cccceEEEEEeCchhHHhhhccCCcccccccccccccc
Q 046506 81 AAYAGSACICPEFR--HFID----GVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVV 153 (310)
Q Consensus 81 ~a~~~~~~~~~~~~--~~~~----~~~~~D~~~~~~hK~l~-~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~ 153 (310)
++|+.+........ .... .....+++..|+||+++ ....+|+++. ++.......... .+...
T Consensus 194 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~~~~~~-~~~~~--------- 262 (376)
T 3ezs_A 194 ECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAG-DSRLLEKYKAFR-AYLGY--------- 262 (376)
T ss_dssp CTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEE-CHHHHHHHHHHH-TTTCC---------
T ss_pred ccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEee-CHHHHHHHHHHH-hhhcC---------
Confidence 99986544221100 0000 01246788999999996 3455777765 444432221100 00000
Q ss_pred CCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhh
Q 046506 154 DYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKT 233 (310)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~ 233 (310)
. .-......+.++++. .+.+++..++..++.+++.+.|+ ++. .+....++.+.+..
T Consensus 263 -------~-~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~---~~~--~~~~~~~~~~~~~~--------- 318 (376)
T 3ezs_A 263 -------T-SANAIQKASEAAWLD--DRHAEFFRNIYANNLKLARKIFK---NTL--IYPYSFYVYLPVQN--------- 318 (376)
T ss_dssp -------C-CCHHHHHHHHHHHHC--SHHHHHHHHHHHHHHHHHHHHST---TCC--CCSBSSEEEEECSC---------
T ss_pred -------C-CChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHhc---CCC--CCCcceEEEEECCC---------
Confidence 0 000112222333332 34578888888899999999987 443 23344555555541
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHh-cCcEEEEEeEE----CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 234 KYENSLLSEEERINEFNRELLESINA-SGKAYMTHAVL----GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~----~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
..++.+.|.+ .|.....+... .+.+++|+|++ .++++++.++++|++++++
T Consensus 319 ----------------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~---~~~~~i~~~l~~l~~~l~~ 374 (376)
T 3ezs_A 319 ----------------GENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALV---YDTPLLEKPLEIIETYREN 374 (376)
T ss_dssp ----------------HHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECC---SCHHHHHHHHHHHHHHHCC
T ss_pred ----------------HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEc---CCHHHHHHHHHHHHHHHHh
Confidence 1356677766 67544432221 24579999965 3899999999999987643
No 164
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.63 E-value=1.2e-14 Score=133.84 Aligned_cols=173 Identities=17% Similarity=0.201 Sum_probs=119.5
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccccc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAG 85 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~ 85 (310)
.|+. +++++.+ |+++|+++|++. +.+|++..++|++|.+.|+++|+++|++||+++++|++|+.
T Consensus 130 ~g~~---~~~v~~~-------d~~~l~~~i~~~------~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~ 193 (400)
T 3nmy_A 130 AGLD---FSFVDLT-------DPAAFKAAIRAD------TKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFAS 193 (400)
T ss_dssp HCCE---EEEECTT-------SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTH
T ss_pred cCeE---EEEECCC-------CHHHHHHHhccC------CCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcc
Confidence 3555 6666653 689999999754 45888899999999999999999999999999999999976
Q ss_pred ccccChhhhhhhcCCCCCCeeeeeccccccccc-ce-E-EEEEeCchhHHhhhccCCccccccccccccccCCCCceecc
Q 046506 86 SACICPEFRHFIDGVEGADSFSLNAHKWFFTTL-DC-C-CLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITL 162 (310)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~-g~-g-~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 162 (310)
+....+.. .++|+++.|+||++++|. .. | +++++++.......... .+ .
T Consensus 194 ~~~~~~~~-------~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~-~~--------------------~ 245 (400)
T 3nmy_A 194 PMLQRPLS-------LGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQ-NS--------------------I 245 (400)
T ss_dssp HHHCCGGG-------GTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHH-HH--------------------H
T ss_pred cccCChhh-------cCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHH-Hh--------------------c
Confidence 54332211 159999999999999873 23 4 34445554432221100 00 0
Q ss_pred CCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC-----------------CceEEEEEEcC
Q 046506 163 SRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR-----------------HFAVVCFRVSP 224 (310)
Q Consensus 163 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------------~~~~v~~~~~~ 224 (310)
+.....+..|.+++. .+.+..++++..++++++.+.|++.|.+.-+..| ...+++|.+.+
T Consensus 246 g~~~~~~~a~~~l~~--l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~ 322 (400)
T 3nmy_A 246 GGVQGPFDSFLALRG--LKTLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKG 322 (400)
T ss_dssp CCBCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETT
T ss_pred CCCCCHHHHHHHHHh--HhHHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCC
Confidence 111233445555543 3557788899999999999999998888654322 24578888865
No 165
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.63 E-value=3e-15 Score=139.33 Aligned_cols=257 Identities=10% Similarity=0.091 Sum_probs=142.5
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
...|.. ++++|.+++ ++.+|+++|+++|++. +.+|++++ .+|...|+++|+++|+++|+++|+|+||
T Consensus 128 ~~~g~~---~~~v~~~~~-~~~~d~~~l~~~i~~~------~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~ 194 (437)
T 3bb8_A 128 IQNGLI---PVFVDVDIP-TYNVNASLIEAAVSDK------TKAIMIAH---TLGNLFDLAEVRRVADKYNLWLIEDCCD 194 (437)
T ss_dssp HHTTCE---EEECCEETT-TTEECGGGHHHHCCTT------EEEEEEEC---GGGCCCCHHHHHHHHHHHTCEEEEECTT
T ss_pred HHcCCE---EEEEeccCc-cCCcCHHHHHHhcCCC------CeEEEEeC---CCCChhcHHHHHHHHHHcCCEEEEECcc
Confidence 345665 888988863 4689999999999653 34666654 4688899999999999999999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccc----cccc------c----
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKN----KATE------S---- 149 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~----~~~~------~---- 149 (310)
+.+... +. .. . + ...|+++++++|....|.|.|++++.++..+.+.+.....+... ...+ .
T Consensus 195 ~~g~~~-~~-~~-~-~-~~~d~~~~s~~~~k~l~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (437)
T 3bb8_A 195 ALGSTY-DG-KM-A-G-TFGDIGTVSFYPAKHITMGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQL 269 (437)
T ss_dssp CTTCEE-TT-EE-T-T-SSSSEEEEECSTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTBCC----------------CC
T ss_pred ccCceE-CC-ee-c-c-cccCEEEEECcCCcCCCCCCeEEEEeCCHHHHHHHHHHHHhCccccccccccccccccccccc
Confidence 866544 21 11 1 1 12688777643333334445555555544333321110011100 0000 0
Q ss_pred cccc-CC-CCcee-ccCC--CcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC------CceEE
Q 046506 150 KQVV-DY-KDWQI-TLSR--RFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR------HFAVV 218 (310)
Q Consensus 150 ~~~~-~~-~~~~~-~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~------~~~~v 218 (310)
.+.+ .+ ...+. ..+. +...+....++.. .+.+++..++..++++++.+.|++++++.++... ...++
T Consensus 270 ~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~--l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~ 347 (437)
T 3bb8_A 270 GSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQ--LERIEEFVEKRKANFKYLKDALQSCADFIELPEATENSDPSWFGF 347 (437)
T ss_dssp SCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHGGGGTTTEECCCCCTTEECCCSSE
T ss_pred ccccccccccccccccCcccCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCCCCceeeEEE
Confidence 0000 00 00000 0111 1123333333332 2444667777788999999999998887665321 11123
Q ss_pred EEEEcCC-cchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEe---E-----E--------C--------CE
Q 046506 219 CFRVSPS-AVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHA---V-----L--------G--------GI 273 (310)
Q Consensus 219 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~---~-----~--------~--------~~ 273 (310)
.+.+... .. + ..++.+.|.++|....... . + . ..
T Consensus 348 ~~~~~~~~~~--------------~-------~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 406 (437)
T 3bb8_A 348 PITLKEDSGV--------------S-------RIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMN 406 (437)
T ss_dssp EEEECGGGSS--------------C-------HHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHH
T ss_pred EEEECCcCcC--------------c-------HHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhc
Confidence 3333311 00 0 1356777777775322110 0 0 0 02
Q ss_pred eEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 274 YAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 274 ~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
..+|++++ +++|++||++++++|++++.
T Consensus 407 ~~lrl~~~-~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 407 QTFWIGIY-PGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp HEEEECCS-TTCCHHHHHHHHHHHHHHTT
T ss_pred CEEEecCC-CCCCHHHHHHHHHHHHHHHc
Confidence 36999955 78999999999999988653
No 166
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.62 E-value=1.5e-15 Score=139.79 Aligned_cols=252 Identities=12% Similarity=0.027 Sum_probs=148.8
Q ss_pred eecCCCCCCEEEEecCC---------CCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCccccc---CChHHHHHHHH
Q 046506 4 QIVGIDVKNFRAIKTTK---------SSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAV---DTLKPLCDVAK 71 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~---------~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~---~pl~~I~~l~~ 71 (310)
...|.. ++.+|.++ ..++.+|+++|++++++. +.+|++++++|++|.+ .++++|+++|+
T Consensus 127 ~~~g~~---~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~ 197 (410)
T 3e2y_A 127 RMAGAV---PVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSK------TKAIILNTPHNPLGKVYTRQELQVIADLCV 197 (410)
T ss_dssp HHTTCE---EEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred HHcCCE---EEEEeccccccccccccccCCcCCHHHHHhhcCCC------ceEEEEeCCCCCCCcCcCHHHHHHHHHHHH
Confidence 345665 88888762 124579999999998643 5578888899999998 46999999999
Q ss_pred HhCcEEEeecccccccccChhhhhhh--cCCCCCCeeeeeccccccc-ccceEEEEEeCchhHHhhhccCCccccccccc
Q 046506 72 QFGIWVHVDAAYAGSACICPEFRHFI--DGVEGADSFSLNAHKWFFT-TLDCCCLWVKDPSDLVNSLSTNPEYLKNKATE 148 (310)
Q Consensus 72 ~~g~~l~vD~a~~~~~~~~~~~~~~~--~~~~~~D~~~~~~hK~l~~-p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~ 148 (310)
+||+++++|++|+.+........... ......+++..|++|+++. ...+|+++.+ +..+....... ... ..
T Consensus 198 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~-~~~~~~~~~~~-~~~-~~--- 271 (410)
T 3e2y_A 198 KHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGP-AHLIKHLQTVQ-QNS-FY--- 271 (410)
T ss_dssp HHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECC-HHHHHHHHHHH-HTT-TC---
T ss_pred HcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEEC-HHHHHHHHHHH-Hhh-cc---
Confidence 99999999999976543221110000 0111234777899999973 3457777654 33332221100 000 00
Q ss_pred cccccCCCCceeccCCCcchHHHHHHHHH------hCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEE
Q 046506 149 SKQVVDYKDWQITLSRRFRSLKLWFVLRN------YGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRV 222 (310)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~ 222 (310)
+.-.....++..+++. ...+.++++.++..++.+++.+.|+++ ++++..+.....+.+.+
T Consensus 272 -------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~ 337 (410)
T 3e2y_A 272 -------------TCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSV-GLKPIVPDGGYFIIADV 337 (410)
T ss_dssp -------------CCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT-TCEEEBCSBSSEEEEEC
T ss_pred -------------CCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCccEEEEEEc
Confidence 0000122233333432 124567888899999999999999987 88877554555555555
Q ss_pred cCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEe-EEC-------CEeEEEEEccCCCCCHHHHHHH
Q 046506 223 SPSAVMDKLKTKYENSLLSEEERINEFNRELLESIN-ASGKAYMTHA-VLG-------GIYAIRFAAGATLTEERHVMVA 293 (310)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~-~~~-------~~~~iRis~~~~~~t~edi~~l 293 (310)
..... .+... + .+ .....++...+. +.| +.+.+. ... +.+++|+|+. .++++++.+
T Consensus 338 ~~~~~--~~~~~---~--~~----~~~~~~~~~~ll~~~g-v~v~~g~~f~~~~~~~~~~~~iRis~~---~~~e~l~~~ 402 (410)
T 3e2y_A 338 SSLGA--DLSDM---N--SD----EPYDYKFVKWMTKHKK-LTAIPVSAFCDSKSKPHFEKLVRFCFI---KKDSTLDAA 402 (410)
T ss_dssp GGGCC--CCTTC---C--SS----CCHHHHHHHHHHHHHS-EECEEGGGGSCTTTHHHHTTEEEEECC---CCHHHHHHH
T ss_pred hhhhc--ccccc---c--cc----ccCHHHHHHHHHHHcC-EEEeCchhhCCCCCCCCCCCEEEEEEc---CCHHHHHHH
Confidence 43100 00000 0 00 000124445443 445 444442 221 2478999955 389999999
Q ss_pred HHHHHH
Q 046506 294 WTVVQE 299 (310)
Q Consensus 294 i~~l~~ 299 (310)
+++|++
T Consensus 403 l~~l~~ 408 (410)
T 3e2y_A 403 EEIFRA 408 (410)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 998875
No 167
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.61 E-value=5.2e-16 Score=144.96 Aligned_cols=257 Identities=10% Similarity=0.005 Sum_probs=151.3
Q ss_pred eecCCCCCCEEEEecCCCC----------CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccC---ChHHHHHHH
Q 046506 4 QIVGIDVKNFRAIKTTKSS----------SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVD---TLKPLCDVA 70 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~----------~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~---pl~~I~~l~ 70 (310)
+..|.. ++.+|.++.+ ++.+|+++|+++|++. +.+|++++++|++|.+. ++++|+++|
T Consensus 160 ~~~g~~---~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~~~~~~l~~i~~l~ 230 (447)
T 3b46_A 160 ELCGGK---VVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSK------TKAVIINTPHNPIGKVFTREELTTLGNIC 230 (447)
T ss_dssp HHTTCE---EEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred HHcCCE---EEEEeCCCccccccccccccCcccCHHHHHHhhccC------CeEEEEeCCCCCCCcccCHHHHHHHHHHH
Confidence 445665 8889987542 3679999999998643 45788888999999985 599999999
Q ss_pred HHhCcEEEeecccccccccCh--hhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCcccccccc
Q 046506 71 KQFGIWVHVDAAYAGSACICP--EFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKAT 147 (310)
Q Consensus 71 ~~~g~~l~vD~a~~~~~~~~~--~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~ 147 (310)
++||+++++|++|+...+..+ .......+..+.|+++.|+||+++.| .-+|+++.+++..+....... .+...
T Consensus 231 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l~~~l~~~~-~~~~~--- 306 (447)
T 3b46_A 231 VKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAELLSYAAKAH-TRICF--- 306 (447)
T ss_dssp HHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHHHHHHHHHHH-HHHTS---
T ss_pred HHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHHHHHHHHHHH-hhccC---
Confidence 999999999999976543211 00000000124789999999998744 237888763454433221100 00000
Q ss_pred ccccccCCCCceeccCCCcchHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCc
Q 046506 148 ESKQVVDYKDWQITLSRRFRSLKLWFVLRNYG-VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSA 226 (310)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~ 226 (310)
..+ .....++.++++... ...++++.++..++.+++.+.|.++ ++++..+.....+.+.+....
T Consensus 307 -------------~~~-~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~g~~~~~~~~~~~ 371 (447)
T 3b46_A 307 -------------ASP-SPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDEL-GLPYTAPEGTYFVLVDFSKVK 371 (447)
T ss_dssp -------------SCC-HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH-TCCEECCSBSSEEEEECTTCC
T ss_pred -------------CCC-hHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeEEEEEeccccc
Confidence 000 011223334444321 3357778888899999999999887 777764444455556654310
Q ss_pred chhhhhhhhccccchhHHHHHHHHHHHHHHHHh-cCcEEEEEe-EEC-------CEeEEEEEccCCCCCHHHHHHHHHHH
Q 046506 227 VMDKLKTKYENSLLSEEERINEFNRELLESINA-SGKAYMTHA-VLG-------GIYAIRFAAGATLTEERHVMVAWTVV 297 (310)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~-~~~-------~~~~iRis~~~~~~t~edi~~li~~l 297 (310)
.+. +.. .+..... .....++.++|.+ .|. .+.+. ... +.+++|+|+. +++++++.+++.|
T Consensus 372 ~p~---~~~--~~~~~~~--~~~~~~~~~~l~~~~gV-~v~pg~~f~~~~~~~~~~~~iRls~~---~~~e~l~~~~~~l 440 (447)
T 3b46_A 372 IPE---DYP--YPEEILN--KGKDFRISHWLINELGV-VAIPPTEFYIKEHEKAAENLLRFAVC---KDDAYLENAVERL 440 (447)
T ss_dssp CCT---TCC--CCGGGSS--SCHHHHHHHHHHHHTCE-ECBCGGGGSCGGGGGGGTTEEEEECC---SCHHHHHHHHHHG
T ss_pred Ccc---ccc--ccccccc--CCCHHHHHHHHHHhCCE-EEECchHhCCCCccCCCCCEEEEEEe---CCHHHHHHHHHHH
Confidence 000 000 0000000 0011356666654 554 44332 111 2578999965 3799999999888
Q ss_pred HH
Q 046506 298 QE 299 (310)
Q Consensus 298 ~~ 299 (310)
++
T Consensus 441 ~~ 442 (447)
T 3b46_A 441 KL 442 (447)
T ss_dssp GG
T ss_pred HH
Confidence 76
No 168
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.61 E-value=2.6e-14 Score=132.49 Aligned_cols=183 Identities=14% Similarity=0.121 Sum_probs=121.4
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEec----cCCcccccCChHHHHHHHHH--hCcEE
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATI----GTTAITAVDTLKPLCDVAKQ--FGIWV 77 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~----~~~~~G~~~pl~~I~~l~~~--~g~~l 77 (310)
...|+. ++.+|.+++ +.+|+++|+++|++.. .+.+|++.+ ++|++|.+.|+++|+++|++ +|+++
T Consensus 145 ~~~G~~---~~~v~~~~~--g~~D~e~l~~~l~~~~----~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~l 215 (427)
T 3i16_A 145 KEFGIN---YKQVDLKED--GKPNLEEIEKVLKEDE----SITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIIC 215 (427)
T ss_dssp GGGTCE---EEECCCCTT--SSCCHHHHHHHHHTCT----TEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEE
T ss_pred HHcCCE---EEEecCccC--CCcCHHHHHHHhhCCC----CCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEE
Confidence 345665 888888764 4899999999997311 155788887 88999999999999999999 99999
Q ss_pred EeecccccccccChhhhhhhcCCCCCCeeeeeccccccccc--ceEEEEEeCchhHHhhhcc-CCccccccccccccccC
Q 046506 78 HVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTL--DCCCLWVKDPSDLVNSLST-NPEYLKNKATESKQVVD 154 (310)
Q Consensus 78 ~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~--g~g~l~v~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~ 154 (310)
+||++|+.+........ .++|+++.|+||+++++. ..|+++. +++.+++.... ....+..
T Consensus 216 ivD~a~~~~~~~~~p~~------~gaDiv~~S~sK~lgg~g~~~gG~i~~-~~~li~~l~~~~~~~~~g~---------- 278 (427)
T 3i16_A 216 FVDNCYGEFMDTKEPTD------VGADLIAGSLIKNIGGGIAPTGGYLAG-TKDCIEKTSYRLTVPGIGG---------- 278 (427)
T ss_dssp EEECTTTTTSSSSCGGG------GTCSEEEEETTSGGGTTTCCSCEEEEE-CHHHHHHHHHHHSCTTTGG----------
T ss_pred EEECCCccccccCCccc------cCCeEEEecCcccCCCCCCceEEEEEE-CHHHHHHHHHhcccCccCc----------
Confidence 99999986653221111 158999999999998732 2366554 45444333210 1111110
Q ss_pred CCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCce-----EEEEEEcC
Q 046506 155 YKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFA-----VVCFRVSP 224 (310)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~-----~v~~~~~~ 224 (310)
..+-.+. ..+.+++ +......++++.+++++++++.|+++ ++++. |...+ +++|.+..
T Consensus 279 ------~~~~~~~--~a~~~l~--gl~~~~~r~~~~~~~a~~la~~L~~~-g~~V~-p~~~~~~~~~i~~i~l~~ 341 (427)
T 3i16_A 279 ------ECGSTFG--VVRSMYQ--GLFLAPHISMEALKGAILCSRIMELA-GFEVM-PKYDEKRSDIIQSIKFND 341 (427)
T ss_dssp ------GCCCCTT--CHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEE-SCTTSCCSSSCEEEECSS
T ss_pred ------cCCccHH--HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhC-CCeec-CCCCCCCccEEEEEEECC
Confidence 0000011 1233333 33556788999999999999999987 56775 32333 77787753
No 169
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.61 E-value=1.2e-14 Score=134.00 Aligned_cols=181 Identities=11% Similarity=0.002 Sum_probs=120.8
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEec----cCCcccccCChHHHHHHHHH--hCcEE
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATI----GTTAITAVDTLKPLCDVAKQ--FGIWV 77 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~----~~~~~G~~~pl~~I~~l~~~--~g~~l 77 (310)
+..|+. ++++|.+++ +.+|+++|+++|+++ +.+|++.+ ++|++|.+.|+++|+++|++ ||+++
T Consensus 130 ~~~G~~---~~~v~~~~~--g~~d~e~l~~ai~~~------tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~l 198 (409)
T 3jzl_A 130 KDFHIG---YSSVPLLEN--GDVDFPRIAKKMTPK------TKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIV 198 (409)
T ss_dssp GGGTCE---EEECCCCTT--SCCCHHHHHHHCCTT------EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEE
T ss_pred HHcCCE---EEEeCCCCC--CCcCHHHHHHhccCC------CeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEE
Confidence 345665 888888764 589999999999754 45888888 88999999999999999999 99999
Q ss_pred EeecccccccccChhhhhhhcCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhcc-CCccccccccccccccC
Q 046506 78 HVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLST-NPEYLKNKATESKQVVD 154 (310)
Q Consensus 78 ~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~ 154 (310)
+||++|+.+....... . .++|+++.|+||+++++.. .|++. .+++.++..... ..+.+...
T Consensus 199 ivD~a~~~~~~~~~p~---~---~g~Div~~S~sK~lgg~~~~~GG~v~-~~~~li~~l~~~~~~~~~g~~--------- 262 (409)
T 3jzl_A 199 FVDNCYGEFVEYQEPP---E---VGADIIAGSLIKNPGGGLAKTGGYIA-GKEALVDLCGYRLTTPGIGRE--------- 262 (409)
T ss_dssp EEECTTCTTTSSCCSG---G---GTCSEEEEETTSGGGTTTCSSCEEEE-ECHHHHHHHHHHHSCTTTGGG---------
T ss_pred EEeCCcccccccCCcc---c---cCCeEEEECccccCCccCCceEEEEE-eCHHHHHHHHHHhcccccccc---------
Confidence 9999998665322111 1 1589999999999987531 25554 456554433210 11111100
Q ss_pred CCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCce-----EEEEEEcC
Q 046506 155 YKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFA-----VVCFRVSP 224 (310)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~-----~v~~~~~~ 224 (310)
.+-.... .+++++ +......++++..++++++++.|+++ ++++... ... +++|.+..
T Consensus 263 -------~g~~~~~--~~~~l~--gl~~~~~r~~~~~~~a~~la~~L~~~-g~~v~p~-~~~~~~~~i~~i~l~~ 324 (409)
T 3jzl_A 263 -------AGASLYS--LLEMYQ--GFFLAPHVTAQAIKGARFTAAMLAEF-GVEADPV-WDAPRTDLIQSVSFHN 324 (409)
T ss_dssp -------CCCCTTC--HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEESC-TTSCCSSSCCEEECSC
T ss_pred -------ccccHHH--HHHHHH--HHhhHHHHHHHHHHHHHHHHHHHHhC-CCcccCC-CCCCCccEEEEEEeCC
Confidence 0000110 122332 33456778889999999999999987 6777532 323 66777753
No 170
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.61 E-value=1.7e-14 Score=133.25 Aligned_cols=247 Identities=10% Similarity=0.056 Sum_probs=144.8
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEecc-CCcccccCChHH---HHHHHH------H
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIG-TTAITAVDTLKP---LCDVAK------Q 72 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~-~~~~G~~~pl~~---I~~l~~------~ 72 (310)
++..|.. ++.+|.++. ++.+|+++|+++|++..... ...++++..+ +|++|.+.|.++ |+++|+ +
T Consensus 143 ~~~~g~~---~~~v~~~~~-~~~~d~~~l~~~l~~~~~~~-~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~ 217 (418)
T 3rq1_A 143 CSDTGRT---LVTYSLFDE-HNNFNHEAFQNRVNELAAKQ-TNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGR 217 (418)
T ss_dssp HHHTTCE---EEEECSBCT-TSSBCHHHHHHHHHHHHHHC-SEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSS
T ss_pred HHHcCCE---EEEEeeeCC-CCCcCHHHHHHHHHHhhccC-CCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccC
Confidence 3456666 899998653 36899999999998642211 1236666667 899999988655 555666 8
Q ss_pred hCcEEEeecccccccccChhhhhhhcCCC--CCC---eeeeecccccccc-cceEEEEE--eCchhHHhhhccCCccccc
Q 046506 73 FGIWVHVDAAYAGSACICPEFRHFIDGVE--GAD---SFSLNAHKWFFTT-LDCCCLWV--KDPSDLVNSLSTNPEYLKN 144 (310)
Q Consensus 73 ~g~~l~vD~a~~~~~~~~~~~~~~~~~~~--~~D---~~~~~~hK~l~~p-~g~g~l~v--~~~~~~~~~~~~~~~y~~~ 144 (310)
||+++++|++|.................. .-| +++.|++|.++.| ...|+++. ++++......... .+...
T Consensus 218 ~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~-~~~~~ 296 (418)
T 3rq1_A 218 NNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVN-KSTSR 296 (418)
T ss_dssp CEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHH-HHHHH
T ss_pred CCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHH-HHHHh
Confidence 99999999999654432211111111111 123 5668999998754 34677765 2454432221100 00000
Q ss_pred cccccccccCCCCceeccCCCcchHHHHHHHHHhCHH--------HHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCce
Q 046506 145 KATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA--------NLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFA 216 (310)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~ 216 (310)
.. ......++..++...+... ...++.++..++.+++.+.|.++ ++++. ++..+
T Consensus 297 ~~----------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~ 358 (418)
T 3rq1_A 297 AT----------------WSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV-GLPML-PYRGG 358 (418)
T ss_dssp HH----------------TSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCCC-CCCSS
T ss_pred hc----------------cCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCC-CCCce
Confidence 00 0001223333333333221 23355667778888888888876 77765 34444
Q ss_pred EEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHH
Q 046506 217 VVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTV 296 (310)
Q Consensus 217 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~ 296 (310)
.+.+.-.+. ..++.+.|.+.|. .+.+. .+.+|+|+. ..++++++.++++
T Consensus 359 ~~~~~~~~~------------------------~~~~~~~l~~~gi-~v~~g----~~~iRis~~--~~~~~~i~~~~~~ 407 (418)
T 3rq1_A 359 FFITIPTDS------------------------ANAICEELKKEHI-YVIAL----ANGIRIAAC--GIPKCQMTGLAEK 407 (418)
T ss_dssp SEEEEECTT------------------------HHHHHHHHHHTTE-ECEEC----SSEEEEEGG--GSCHHHHTTHHHH
T ss_pred EEEEcCCCC------------------------HHHHHHHHHhCCE-EEecC----CCCeEEEEe--cCCHHHHHHHHHH
Confidence 433321111 1355666767764 44432 457999955 4689999999999
Q ss_pred HHHHHHHH
Q 046506 297 VQEHLEAL 304 (310)
Q Consensus 297 l~~~~~~~ 304 (310)
|+++++++
T Consensus 408 l~~~l~~~ 415 (418)
T 3rq1_A 408 IYNAMKSL 415 (418)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 99988765
No 171
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.60 E-value=1.6e-14 Score=132.40 Aligned_cols=218 Identities=11% Similarity=0.026 Sum_probs=130.4
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++|+++|++. +.++++...++++|.+.| +++|+++|++||+++++|++|++.............++ .
T Consensus 168 d~~~l~~~l~~~------~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~-~ 240 (395)
T 3nx3_A 168 DISSVEKLVNEK------TCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQI-L 240 (395)
T ss_dssp CHHHHHTTCCTT------EEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-C
T ss_pred CHHHHHHhccCC------eEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCC-C
Confidence 789999998643 457777778888899888 99999999999999999999974432211111001122 3
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
.|++++ .|.++++.++|+++++++ .+.+.+.. ..... ++. +-+..+.+..++++.+..
T Consensus 241 ~d~~t~--sK~~~~G~~~G~~~~~~~-~~~~~~~~--~~~~~--------------~~~-~~~~~~~aa~aal~~~~~-- 298 (395)
T 3nx3_A 241 PDIMTS--AKALGCGLSVGAFVINQK-VASNSLEA--GDHGS--------------TYG-GNPLVCAGVNAVFEIFKE-- 298 (395)
T ss_dssp CSEEEE--CGGGTTTSCCEEEEECHH-HHHHHSCT--TCCSS--------------CBS-CCHHHHHHHHHHHHHHHH--
T ss_pred CCEEEe--cccccCCCceEEEEEchh-hhhhhcCC--cccCC--------------CCC-CCHHHHHHHHHHHHHHHh--
Confidence 677665 498887777888876544 31232211 00000 000 001122223334433322
Q ss_pred HHHHHHHHHHHHHHHHHHHcC----CCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHH
Q 046506 183 LRHFLRSHVNMAKLFERLVGS----DKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESIN 258 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~----~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 258 (310)
++..++..++.+++++.|.+ +|.+... ++..+++.+.+.... ...++.+.+.
T Consensus 299 -~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~----------------------~~~~~~~~l~ 354 (395)
T 3nx3_A 299 -EKILENVNKLTPYLEQSLDELINEFDFCKKR-KGLGFMQGLSLDKSV----------------------KVAKVIQKCQ 354 (395)
T ss_dssp -TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEECTTS----------------------CHHHHHHHHH
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EeEEEEEEEEeCCcc----------------------hHHHHHHHHH
Confidence 34455555555565555543 4545433 234556777665421 0135667777
Q ss_pred hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 259 ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 259 ~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
++|.+.. +. +.+.+|++++ ..+|++|+++++++|+++++
T Consensus 355 ~~Gi~v~-~~---~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~ 393 (395)
T 3nx3_A 355 ENALLLI-SC---GENDLRFLPP-LILQKEHIDEMSEKLRKALK 393 (395)
T ss_dssp HTTEECE-EE---TTTEEEECCC-TTCCHHHHHHHHHHHHHHHH
T ss_pred HCCCEEe-cC---CCCEEEEECC-CCCCHHHHHHHHHHHHHHHH
Confidence 7875443 32 3578999955 67899999999999998765
No 172
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.60 E-value=2.1e-14 Score=132.82 Aligned_cols=173 Identities=10% Similarity=0.100 Sum_probs=119.5
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccccc
Q 046506 6 VGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAG 85 (310)
Q Consensus 6 ~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~ 85 (310)
+|+. ++++|.+ |+++|+++|++. +.+|++..++|++|.+.|+++|+++|++||+++++|++|+.
T Consensus 144 ~g~~---~~~v~~~-------d~~~l~~ai~~~------t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~ 207 (414)
T 3ndn_A 144 WGVQ---TVFVDGD-------DLSQWERALSVP------TQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFAT 207 (414)
T ss_dssp TTCE---EEEECTT-------CHHHHHHHTSSC------CSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTH
T ss_pred cCcE---EEEeCCC-------CHHHHHHhcCCC------CeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcc
Confidence 5665 7777664 689999999754 34788899999999999999999999999999999999986
Q ss_pred ccccChhhhhhhcCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccC
Q 046506 86 SACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLS 163 (310)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 163 (310)
+....+. . .++|+++.|++|+++++.. .|+++.+++ .+.+.+.. +... .+
T Consensus 208 ~~~~~~~------~-~g~div~~S~sK~l~~~G~~~~G~vv~~~~-~~~~~l~~---~~~~-----------------~g 259 (414)
T 3ndn_A 208 PLLQQGF------P-LGVDVVVYSGTKHIDGQGRVLGGAILGDRE-YIDGPVQK---LMRH-----------------TG 259 (414)
T ss_dssp HHHCCCG------G-GTCSEEEEETTTTTTCSSCCCCEEEEECHH-HHTTHHHH---HHHH-----------------HC
T ss_pred cccCCch------h-cCCCeEeccCCccccCCCCceEEEEEECHH-HHHHHHHH---HHHH-----------------cC
Confidence 5433221 1 1589999999999976542 566666543 33211110 0000 01
Q ss_pred CCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCC-----------------CceEEEEEEcC
Q 046506 164 RRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPR-----------------HFAVVCFRVSP 224 (310)
Q Consensus 164 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~-----------------~~~~v~~~~~~ 224 (310)
........|.+++ +.+.+..++++..++++++.+.|++.|++..+..| ..++++|.+.+
T Consensus 260 ~~~~~~~a~~~~~--~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~ 335 (414)
T 3ndn_A 260 PAMSAFNAWVLLK--GLETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDC 335 (414)
T ss_dssp CCCCHHHHHHHHH--HGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECS
T ss_pred CCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcC
Confidence 1123344444444 34667888899999999999999998888644322 24578888865
No 173
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.39 E-value=6.7e-17 Score=148.21 Aligned_cols=249 Identities=10% Similarity=0.002 Sum_probs=149.9
Q ss_pred ceecCCCCCCEEEEecCC-CCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEE
Q 046506 3 AQIVGIDVKNFRAIKTTK-SSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVH 78 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~-~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~ 78 (310)
++..|.. ++.+|.++ ++.+.+|+++|+++|++.. +.++++++++|++|.+.| +++|+++|++||++++
T Consensus 130 ~~~~g~~---~~~~~~~~~~g~~~~d~~~l~~~l~~~~-----~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li 201 (392)
T 3b1d_A 130 VRLNNRK---LVSNSLKEENGLFQIDFEQLENDIVEND-----VKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILV 201 (392)
Confidence 4455665 78888853 3346699999999997321 336667788899999866 9999999999999999
Q ss_pred eecccccccccChhhhhhh---cCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccC
Q 046506 79 VDAAYAGSACICPEFRHFI---DGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVD 154 (310)
Q Consensus 79 vD~a~~~~~~~~~~~~~~~---~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 154 (310)
+|++|+.+........... ......+.+..+++|+++.| ..+|++++.++............+.
T Consensus 202 ~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~------------ 269 (392)
T 3b1d_A 202 SDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVNN------------ 269 (392)
Confidence 9999976654321111110 00013457789999999733 4567777665533322111111110
Q ss_pred CCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcC-CCCeEEecCCCceEEE-EEEcCCcchhhhh
Q 046506 155 YKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGS-DKRFEVVFPRHFAVVC-FRVSPSAVMDKLK 232 (310)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~-~~~~~v~~~~~~~~v~-~~~~~~~~~~~~~ 232 (310)
+.+.-.....++.++++ .+.+.+++..++..++.+++.+.|++ +|++++. ++..+.+. +.+....
T Consensus 270 -----~~~~~~~~~~a~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~i~~~~~~------ 336 (392)
T 3b1d_A 270 -----HHEVSSLGYIATETAYR-YGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVM-KPQGTYLIWLDFSDYG------ 336 (392)
Confidence 00000111222223333 12456777888888899999999987 7888775 34444443 4443210
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeEE--CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 233 TKYENSLLSEEERINEFNRELLESIN-ASGKAYMTHAVL--GGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
....++.+.|. +.|.....+... .+.+++|+++.. ++++++.+++.|++.++
T Consensus 337 ---------------~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~---~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 337 ---------------LTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAA---PKSLVEEICKRIVCCLP 391 (392)
Confidence 01135666665 456544332222 245789999553 57899999999887653
No 174
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.60 E-value=1e-14 Score=134.96 Aligned_cols=247 Identities=11% Similarity=0.068 Sum_probs=143.8
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEE-eccCCcccccCChH---HHHHHH-HHhCcEEE
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCA-TIGTTAITAVDTLK---PLCDVA-KQFGIWVH 78 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~-~~~~~~~G~~~pl~---~I~~l~-~~~g~~l~ 78 (310)
+..|.. ++.+|.+++ .+|+++|+++|++.. .+.+|++ .+.+|++|.+.|.+ +|+++| ++||++++
T Consensus 142 ~~~g~~---~~~v~~~~~---g~d~~~l~~~l~~~~----~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li 211 (423)
T 3ez1_A 142 QTLGFE---LLTVDMQSD---GPDVDAVERLAGTDP----SVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIF 211 (423)
T ss_dssp HHHTCE---EEEEEEETT---EECHHHHHHHHHSCT----TEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEE
T ss_pred HHcCCE---EEeccCCCC---CCCHHHHHHHHhhCC----CceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEE
Confidence 456666 899999864 499999999996211 1445544 47789999998877 888899 99999999
Q ss_pred eecccccccccC-h-----hhhhhh--cCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccc
Q 046506 79 VDAAYAGSACIC-P-----EFRHFI--DGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESK 150 (310)
Q Consensus 79 vD~a~~~~~~~~-~-----~~~~~~--~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~ 150 (310)
+|++|+...+.. . ...... .+..+.+++..|++|+++...++|+++.++ ..+.........+...
T Consensus 212 ~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~------ 284 (423)
T 3ez1_A 212 ADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSE-DNIRWLSKYLGAQSIG------ 284 (423)
T ss_dssp EECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECH-HHHHHHHHHHHHSCSC------
T ss_pred EECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCH-HHHHHHHHHHhhhccC------
Confidence 999997432211 0 001100 011235688899999866667788777653 3332221100000000
Q ss_pred cccCCCCceeccCCCcchHHHHHHHHH-hC--HHHHHHHHHHHH----HHHHHHHHHHcCCC-CeEEecCCCceEEEEEE
Q 046506 151 QVVDYKDWQITLSRRFRSLKLWFVLRN-YG--VANLRHFLRSHV----NMAKLFERLVGSDK-RFEVVFPRHFAVVCFRV 222 (310)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~--~~~~~~~~~~~~----~~a~~l~~~L~~~~-~~~v~~~~~~~~v~~~~ 222 (310)
.-......+..+++. .+ ...+++..+... .+.+.+.+.|.+++ ++.+..+.....+.+.+
T Consensus 285 ------------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~ 352 (423)
T 3ez1_A 285 ------------PNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDT 352 (423)
T ss_dssp ------------CCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEE
T ss_pred ------------CCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEEC
Confidence 000111222222322 11 122333333333 33444555555554 47766555566677777
Q ss_pred cCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEE-e-EE-----CCEeEEEEEccCCCCCHHHHHHHHH
Q 046506 223 SPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTH-A-VL-----GGIYAIRFAAGATLTEERHVMVAWT 295 (310)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~-~~-----~~~~~iRis~~~~~~t~edi~~li~ 295 (310)
...+ ...+.+.+.+.|. .+.+ . .+ .+.+++|+|+. . .++++++.+++
T Consensus 353 ~~~~-----------------------~~~~~~~l~~~gv-~v~~~g~~~~~~~~~~~~~iRis~~-~-~~~~~i~~~~~ 406 (423)
T 3ez1_A 353 AEPV-----------------------ADRVVKLAEAAGV-SLTPAGATYPAGQDPHNRNLRLAPT-R-PPVEEVRTAMQ 406 (423)
T ss_dssp SSSC-----------------------HHHHHHHHHHTTE-ECCCTTTTSSTTCCSSSCEEEECCS-S-SCHHHHHHHHH
T ss_pred CCCc-----------------------HHHHHHHHHHCCc-EEecCcccccCCCCCCCCeEEEEcC-C-CCHHHHHHHHH
Confidence 6421 1345666667764 4433 1 11 24579999965 3 48999999999
Q ss_pred HHHHHHHHHh
Q 046506 296 VVQEHLEALL 305 (310)
Q Consensus 296 ~l~~~~~~~~ 305 (310)
.|+++++++.
T Consensus 407 ~l~~~l~~~~ 416 (423)
T 3ez1_A 407 VVAACIRLAT 416 (423)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999987763
No 175
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.59 E-value=1.4e-14 Score=141.34 Aligned_cols=182 Identities=12% Similarity=0.117 Sum_probs=119.0
Q ss_pred eecCCCCCCEEEEecCCCCCcc----c-----CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhC
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYG----L-----SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFG 74 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~----i-----d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g 74 (310)
.+.|.. +++++++.+ .+. + |+++|+++|++.++.. .|.+++++++ |++|.+.|+++|+++|++++
T Consensus 253 ~lsGa~---pv~v~~~~~-~~gi~~~i~~~~~d~e~Le~~l~~~~~~k-~p~~vivt~p-n~~G~v~dl~~I~ela~~~~ 326 (715)
T 3n75_A 253 MMSDVT---PIYFRPTRN-AYGILGGIPQSEFQHATIAKRVKETPNAT-WPVHAVITNS-TYDGLLYNTDFIKKTLDVKS 326 (715)
T ss_dssp HHSCCE---EEEECCCBC-TTCCBCCCCGGGGSHHHHHHHHHHSTTCC-SCSEEEEESS-CTTSEEECHHHHHHHCCCSE
T ss_pred HHcCCE---EEEEecccc-ccccccCcccccCCHHHHHHHHhhCcCcc-CceEEEEECC-CCCCccCCHHHHHHHhCcCc
Confidence 345555 888887654 343 3 8999999998753211 1346777777 88999999999999999774
Q ss_pred cEEEeecccccccccChhhhhhhcCCC---CCCee---eeecccccccccceEEEEEeCchhHHhhhccCCccccccccc
Q 046506 75 IWVHVDAAYAGSACICPEFRHFIDGVE---GADSF---SLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATE 148 (310)
Q Consensus 75 ~~l~vD~a~~~~~~~~~~~~~~~~~~~---~~D~~---~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~ 148 (310)
++||+||+++....+...+. ..+. .+|.+ +.|+||+++++.++|++++++... ...+.....++..++
T Consensus 327 --livDEAH~~~~~f~~~~~~~-~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~-~~~~~~~~~~~~STS-- 400 (715)
T 3n75_A 327 --IHFDSAWVPYTNFSPIYEGK-CGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVN-EETFNEAYMMHTTTS-- 400 (715)
T ss_dssp --EEEECTTCTTGGGSGGGTTS-STTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCC-HHHHHHHHHHTSCSS--
T ss_pred --EEEccccccccccCCccccc-cccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhh-HHHHHHHHHhhcCCC--
Confidence 79999998776444433211 1121 26876 899999999999999999987621 111111111111111
Q ss_pred cccccCCCCceeccCCC-cchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCC------eEEecC
Q 046506 149 SKQVVDYKDWQITLSRR-FRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKR------FEVVFP 212 (310)
Q Consensus 149 ~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~------~~v~~~ 212 (310)
-. +..+++-++.+.+....-++++++..++++++++.|.++++ ++++.+
T Consensus 401 ---------------psy~~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~ 456 (715)
T 3n75_A 401 ---------------PHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQP 456 (715)
T ss_dssp ---------------CCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSC
T ss_pred ---------------chHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCc
Confidence 11 12344555666665333355789999999999999988764 566643
No 176
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.59 E-value=2.9e-14 Score=132.96 Aligned_cols=231 Identities=12% Similarity=0.004 Sum_probs=144.1
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEeeccccccccc
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVDAAYAGSACI 89 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD~a~~~~~~~ 89 (310)
++.+|.++.+.+..+++++ + .+.+|++..++|++|.+.| +++|+++|++||+++++|++|+.+...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~-----~------~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~ 257 (449)
T 3qgu_A 189 IEYMVCNPDNHFFPDLSKA-----K------RTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISN 257 (449)
T ss_dssp EEEEECCGGGTTCCCGGGC-----C------CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCC
T ss_pred eEEEecccccCCcCChhHc-----C------CCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcC
Confidence 8888988654345554321 1 2446777788999999876 788899999999999999999875443
Q ss_pred Chhhhhh--hcCCCCCCeeeeecccccc-cccceEEEEEeCchhHHh-------hhccCCccccccccccccccCCCCce
Q 046506 90 CPEFRHF--IDGVEGADSFSLNAHKWFF-TTLDCCCLWVKDPSDLVN-------SLSTNPEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 90 ~~~~~~~--~~~~~~~D~~~~~~hK~l~-~p~g~g~l~v~~~~~~~~-------~~~~~~~y~~~~~~~~~~~~~~~~~~ 159 (310)
....... .....+.+++..+++|+++ ....+|+++.+++ .+.. .+.....+ .
T Consensus 258 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~~~~~-----------------~ 319 (449)
T 3qgu_A 258 PDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKA-LKYANGEPVHADWNRVMTT-----------------C 319 (449)
T ss_dssp TTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTT-CBCTTSCBHHHHHHHHHHH-----------------S
T ss_pred CCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHH-HHhhhhhhHHHHHHHHhhc-----------------c
Confidence 2111000 1111235688999999997 3456788876544 2210 00000000 0
Q ss_pred eccCCCcchHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhc
Q 046506 160 ITLSRRFRSLKLWFVLRNYG---VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~ 236 (310)
.. ....+...++...+. .+.++++.++..++.+++.+.|+++ ++++..+....++.+.+.+.+
T Consensus 320 ~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~---------- 385 (449)
T 3qgu_A 320 FN---GASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM-GFSVYGGDDAPYIWVGFPGKP---------- 385 (449)
T ss_dssp CC---CCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEESSSSSEEEEECTTSC----------
T ss_pred cC---CCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCeeEEEEECCCCC----------
Confidence 00 012233334444443 3567888899999999999999987 888775555666766665211
Q ss_pred cccchhHHHHHHHHHHHHHHHHhc-CcEEEEEeE-E--CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 237 NSLLSEEERINEFNRELLESINAS-GKAYMTHAV-L--GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~-~--~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
..++.+.|.++ |. ++.+.. . .+.+++|+|+. .++++++.++++|++++++
T Consensus 386 -------------~~~~~~~l~~~~gI-~v~pg~~f~~~~~~~iRis~~---~~~e~i~~~l~~l~~~~~~ 439 (449)
T 3qgu_A 386 -------------SWDVFAEILERCNI-VTTPGSGYGPAGEGFVRASAF---GSRENILEAVRRFKEAYGK 439 (449)
T ss_dssp -------------HHHHHHHHHHHHCE-ECEEGGGGCGGGTTEEEEECC---SCHHHHHHHHHHHHHHHC-
T ss_pred -------------HHHHHHHHHHHCCE-EEecchHhCCCCCCeEEEEec---CCHHHHHHHHHHHHHHHHh
Confidence 13566666665 54 444322 1 23579999943 4899999999999987744
No 177
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.58 E-value=1.2e-14 Score=134.57 Aligned_cols=243 Identities=12% Similarity=0.018 Sum_probs=144.8
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEE-EeccCCcccccCChH---HHHHHHH-HhCcEEE
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLC-ATIGTTAITAVDTLK---PLCDVAK-QFGIWVH 78 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~-~~~~~~~~G~~~pl~---~I~~l~~-~~g~~l~ 78 (310)
+..|.. ++.+|.+++ .+|+++|++++++. .+.+|+ ..+.+|++|.+.|.+ +|+++|+ +||++++
T Consensus 149 ~~~g~~---~~~v~~~~~---g~d~~~l~~~l~~~-----~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li 217 (422)
T 3d6k_A 149 EHFGFE---MINVPMTDE---GPDMGVVRELVKDP-----QVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIV 217 (422)
T ss_dssp HHHTCE---EEEEEEETT---EECHHHHHHHHTST-----TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEE
T ss_pred HHcCCE---EEecCCCCC---CCCHHHHHHHHhcC-----CCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEE
Confidence 445666 899999863 39999999999642 144555 577889999998876 8888888 9999999
Q ss_pred eecccccccccCh--hhhhhh-----cCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccc
Q 046506 79 VDAAYAGSACICP--EFRHFI-----DGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESK 150 (310)
Q Consensus 79 vD~a~~~~~~~~~--~~~~~~-----~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~ 150 (310)
+|++|+...+... ...... .+....+++..|++|+ +.| ..+|+++.+ +..+.........+.
T Consensus 218 ~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~~~-~~l~~~l~~~~~~~~-------- 287 (422)
T 3d6k_A 218 WDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THAGSGVSFFASS-KENIEWYASHANVRG-------- 287 (422)
T ss_dssp EECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCTTSSCEEEECC-HHHHHHHHHHHHHHC--------
T ss_pred EECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cCcccceEEEEeC-HHHHHHHHHHHHhhc--------
Confidence 9999974221111 010110 1122356788999998 444 347888765 433322211100000
Q ss_pred cccCCCCceeccCCCcchHHHHHHHHHhCH-----HHHHHHHHHHHHHHHHHHHHHcC----CCCeEEecCCCceEEEEE
Q 046506 151 QVVDYKDWQITLSRRFRSLKLWFVLRNYGV-----ANLRHFLRSHVNMAKLFERLVGS----DKRFEVVFPRHFAVVCFR 221 (310)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~a~~l~~~L~~----~~~~~v~~~~~~~~v~~~ 221 (310)
. ....+...++...+.. +.+++..++..+..+.+.+.|.+ ++++.+..+.....+.+.
T Consensus 288 -----------~--~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~ 354 (422)
T 3d6k_A 288 -----------I--GPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVD 354 (422)
T ss_dssp -----------S--CCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEE
T ss_pred -----------C--CCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEE
Confidence 0 0122333333333432 23444455555555555555543 434666545455666676
Q ss_pred EcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEE-eE-E-----CCEeEEEEEccCCCCCHHHHHHHH
Q 046506 222 VSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTH-AV-L-----GGIYAIRFAAGATLTEERHVMVAW 294 (310)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~~-~-----~~~~~iRis~~~~~~t~edi~~li 294 (310)
+...+ ...+.+.+.+.|. .+.+ .. + .+.+++|+|+. . +++++++.++
T Consensus 355 ~~~~~-----------------------~~~~~~~l~~~gV-~v~~~g~~f~~~~~~~~~~iRis~~-~-~~~e~i~~~~ 408 (422)
T 3d6k_A 355 VVPGT-----------------------ASRVVELAKEAGI-ALTGAGSSFPLHNDPNNENIRLAPS-L-PPVAELEVAM 408 (422)
T ss_dssp ESTTC-----------------------HHHHHHHHHHTTE-ECCCTTTTSGGGCCTTSCEEEECCS-S-SCHHHHHHHH
T ss_pred CCCCC-----------------------HHHHHHHHHHCCe-EEEcCccccCCCCCCCCCeEEEecC-C-CCHHHHHHHH
Confidence 65421 1345566666764 4433 21 1 13578999966 3 8899999999
Q ss_pred HHHHHHHHHHhh
Q 046506 295 TVVQEHLEALLS 306 (310)
Q Consensus 295 ~~l~~~~~~~~~ 306 (310)
++|++++.++.+
T Consensus 409 ~~l~~~l~~~~~ 420 (422)
T 3d6k_A 409 DGFATCVLMAAL 420 (422)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999877643
No 178
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.58 E-value=5.5e-15 Score=137.00 Aligned_cols=244 Identities=11% Similarity=0.009 Sum_probs=144.9
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEe-ccCCcccccCChH---HHHHHH-HHhCcEE
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCAT-IGTTAITAVDTLK---PLCDVA-KQFGIWV 77 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~-~~~~~~G~~~pl~---~I~~l~-~~~g~~l 77 (310)
++..|.. ++.+|++++ .+|+++|+++|+.. .+.+|+++ +.+|++|.+.|.+ +|+++| ++||+++
T Consensus 150 ~~~~g~~---~~~v~~~~~---g~d~~~l~~~l~~~-----~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~i 218 (427)
T 3ppl_A 150 TERFGFE---MISVPMNED---GPDMDAVEELVKNP-----QVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRV 218 (427)
T ss_dssp HHHTTCE---EEEEEEETT---EECHHHHHHHTTST-----TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEE
T ss_pred HHHcCCE---EEEeCCCCC---CCCHHHHHHHHhcC-----CCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEE
Confidence 3456776 999999864 39999999999421 14455544 7789999998877 899999 9999999
Q ss_pred EeecccccccccChh-----hhhhh--cCCCCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccc
Q 046506 78 HVDAAYAGSACICPE-----FRHFI--DGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESK 150 (310)
Q Consensus 78 ~vD~a~~~~~~~~~~-----~~~~~--~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~ 150 (310)
++|++|+...+.... ..... .+..+.+++..|++|+++...++|+++.. +..+....... .+.
T Consensus 219 i~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~-~~l~~~~~~~~-~~~-------- 288 (427)
T 3ppl_A 219 VWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTS-AENRKWYTGHA-GIR-------- 288 (427)
T ss_dssp EEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECC-HHHHHHHHHHH-HHH--------
T ss_pred EEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcC-HHHHHHHHHHh-hcc--------
Confidence 999999764322110 11100 01224568889999996655677877654 43332221100 000
Q ss_pred cccCCCCceeccCCCcchHHHHHHHHHhCH-----HHHHHHHHHHHHHHHHHHHHH----cCCCCeEEecCCCceEEEEE
Q 046506 151 QVVDYKDWQITLSRRFRSLKLWFVLRNYGV-----ANLRHFLRSHVNMAKLFERLV----GSDKRFEVVFPRHFAVVCFR 221 (310)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~a~~l~~~L----~~~~~~~v~~~~~~~~v~~~ 221 (310)
+.....+..+++...+.. ..+.+..++..+..+.+.+.| .+++++.+..+.....+.+.
T Consensus 289 ------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~ 356 (427)
T 3ppl_A 289 ------------GIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLD 356 (427)
T ss_dssp ------------CSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEE
T ss_pred ------------cCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEE
Confidence 001122222333333322 223444444444444454444 44445776655456666676
Q ss_pred EcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEE-e-EE-----CCEeEEEEEccCCCCCHHHHHHHH
Q 046506 222 VSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTH-A-VL-----GGIYAIRFAAGATLTEERHVMVAW 294 (310)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~-~~-----~~~~~iRis~~~~~~t~edi~~li 294 (310)
+...+ ..++.+.+.+.|. .+.+ . .+ .+.+++|+|+. . .++++++.++
T Consensus 357 ~~~~~-----------------------~~~~~~~l~~~gv-~v~~~g~~~~~~~~~~~~~~Ris~~-~-~~~~~i~~~~ 410 (427)
T 3ppl_A 357 VVPGT-----------------------ASRVAELAKEAGI-ALTGAGSSYPLRQDPENKNLRLAPS-L-PPVEELEVAM 410 (427)
T ss_dssp CSTTC-----------------------HHHHHHHHHHTTE-ECCCTTTTSGGGCCTTSCEEEECCS-S-SCHHHHHHHH
T ss_pred CCcch-----------------------HHHHHHHHHHCCC-EEecCcCcCCCCCCCCCCeEEEECC-C-CCHHHHHHHH
Confidence 65421 1356666767764 4433 1 11 24679999975 3 4899999999
Q ss_pred HHHHHHHHHHh
Q 046506 295 TVVQEHLEALL 305 (310)
Q Consensus 295 ~~l~~~~~~~~ 305 (310)
+.|+++++++.
T Consensus 411 ~~l~~~l~~~~ 421 (427)
T 3ppl_A 411 DGVATCVLLAA 421 (427)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999887653
No 179
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.58 E-value=1.7e-14 Score=132.26 Aligned_cols=216 Identities=13% Similarity=0.080 Sum_probs=133.8
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccc----cCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITA----VDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~----~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++|+++|++. +.+|+++..+|++|. .+++++|+++|++||+++++|++|++.........-...+. .
T Consensus 172 d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~ 244 (397)
T 2ord_A 172 NVEDLRRKMSED------VCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGV-V 244 (397)
T ss_dssp CHHHHHHHCCTT------EEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTC-C
T ss_pred CHHHHHHHhhcC------eEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCC-C
Confidence 789999998643 568888889999998 36799999999999999999999974322111110001121 3
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
+|+++ .+|+++++..+|+++++++ .. .+. .. ... . ++ ..-......+.++++.+..
T Consensus 245 ~d~~s--~sK~~~~G~r~G~~~~~~~-~~--~l~--~~---~~~---------~--~~-~~~~~~~~a~~~~l~~~~~-- 300 (397)
T 2ord_A 245 PDVLT--TAKGLGGGVPIGAVIVNER-AN--VLE--PG---DHG---------T--TF-GGNPLACRAGVTVIKELTK-- 300 (397)
T ss_dssp CSEEE--ECGGGGTTSCCEEEEECST-TC--CCC--TT---SSC---------C--SS-TTCHHHHHHHHHHHHHHTS--
T ss_pred CCeee--eccccCCCcCeEEEEEchH-hc--ccC--CC---CcC---------C--CC-CCCHHHHHHHHHHHHHHHh--
Confidence 68764 4799997667899887655 22 111 00 000 0 00 0001122334444544432
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC----CCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHH
Q 046506 183 LRHFLRSHVNMAKLFERLVGSD----KRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESIN 258 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~----~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 258 (310)
+++.++..++++++.+.|+++ +.+... ++..+++.+.+.... ...++.+.|.
T Consensus 301 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~~~~~----------------------~~~~l~~~l~ 356 (397)
T 2ord_A 301 -EGFLEEVEEKGNYLMKKLQEMKEEYDVVADV-RGMGLMIGIQFREEV----------------------SNREVATKCF 356 (397)
T ss_dssp -TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEECTTS----------------------CHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHHhCCceEEE-EEEeEEEEEEECChH----------------------HHHHHHHHHH
Confidence 456677777888888888653 322222 234566777765420 0135667777
Q ss_pred hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 259 ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 259 ~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
+.|. .+.+. +.+.+|++++ ..++++|+++++++|++++.
T Consensus 357 ~~gi-~v~~~---~~~~iRis~~-~~~~~e~i~~~~~~l~~~l~ 395 (397)
T 2ord_A 357 ENKL-LVVPA---GNNTIRFLPP-LTVEYGEIDLAVETLKKVLQ 395 (397)
T ss_dssp HTTE-ECEEE---TTTEEEECCC-TTCCHHHHHHHHHHHHHHHH
T ss_pred HCCC-EEccC---CCCEEEEECC-cCCCHHHHHHHHHHHHHHHh
Confidence 7764 44432 3568999965 57899999999999998764
No 180
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.58 E-value=8.1e-14 Score=129.65 Aligned_cols=222 Identities=8% Similarity=-0.006 Sum_probs=133.1
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccC----ChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVD----TLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~----pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++|+++|... .+.+|+++...+++|.+. ++++|+++|++||+++++|++|.+.........-...++ .
T Consensus 200 d~~~le~~l~~~-----~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~-~ 273 (433)
T 1z7d_A 200 DLEALEEELKDP-----NVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNV-K 273 (433)
T ss_dssp CHHHHHHHHTST-----TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-C
T ss_pred CHHHHHHHhCCC-----CEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCC-C
Confidence 789999999411 145677766667789765 799999999999999999999964322111111001122 3
Q ss_pred CCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
.|++ +.+|++++. ...|++++++ +.. +.+. +.. .. .++ .+-+..+.++.++++.+..
T Consensus 274 ~di~--t~sK~l~~G~~~~G~v~~~~-~~~-~~l~--~~~---~~-----------~t~-~~~~~~~aaa~aal~~~~~- 331 (433)
T 1z7d_A 274 PDVI--LLGKALSGGHYPISAVLAND-DIM-LVIK--PGE---HG-----------STY-GGNPLAASICVEALNVLIN- 331 (433)
T ss_dssp CSEE--EECGGGGTTSSCCEEEEECH-HHH-TTCC--TTC---CC-----------CTT-TTCHHHHHHHHHHHHHHHH-
T ss_pred CCEE--EECccccCCCCCeEEEEECH-HHH-hhhc--ccc---cc-----------ccC-CCCHHHHHHHHHHHHHHHh-
Confidence 6876 556999854 3488887754 333 2221 100 00 000 1111222333444544422
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC----CCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSD----KRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESI 257 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~----~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (310)
+++.++..++.+++.+.|+++ |.+... ++..+++.+.+.... ....++.+.|
T Consensus 332 --~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~-~~~g~~~~i~~~~~~---------------------~~~~~~~~~l 387 (433)
T 1z7d_A 332 --EKLCENAEKLGGPFLENLKRELKDSKIVRDV-RGKGLLCAIEFKNEL---------------------VNVLDICLKL 387 (433)
T ss_dssp --TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEE-EEETTEEEEEECTTT---------------------CCHHHHHHHH
T ss_pred --ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EeeeeEEEEEEccCh---------------------hHHHHHHHHH
Confidence 246677777888888887653 333222 234556777665420 0013567777
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
.++|. .+.+. +.+++|++++ ..+|++|+++++++|++++.++.
T Consensus 388 ~~~Gv-~v~~~---~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~~~~ 430 (433)
T 1z7d_A 388 KENGL-ITRDV---HDKTIRLTPP-LCITKEQLDECTEIIVKTVKFFD 430 (433)
T ss_dssp HHTTE-ECCEE---TTTEEEECCC-TTCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHCCe-EEecC---CCCEEEEECC-cCCCHHHHHHHHHHHHHHHHHHH
Confidence 77774 44332 3568999955 57899999999999999887764
No 181
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.58 E-value=2.4e-13 Score=125.72 Aligned_cols=219 Identities=12% Similarity=-0.022 Sum_probs=131.1
Q ss_pred cCHHHHH-HHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCC
Q 046506 26 LSPDSLM-AKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV 100 (310)
Q Consensus 26 id~~~Le-~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~ 100 (310)
+|+++|+ ++|++.. ....+.+++++..++++|.+.| +++|+++|++||+++++|++|+..........-...++
T Consensus 194 ~~~~~l~~~~i~~~~-~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~ 272 (419)
T 2eo5_A 194 RVIEFIEDYIFVNLV-PPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNT 272 (419)
T ss_dssp HHHHHHHHTHHHHTC-CGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC
T ss_pred HHHHHHHHHHHhhcc-CCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCC
Confidence 4789999 9987520 0001445666656667898777 99999999999999999999974432211110001122
Q ss_pred CCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhC
Q 046506 101 EGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYG 179 (310)
Q Consensus 101 ~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 179 (310)
..|+++ ..|+++++ ..+|+++.+++ .. .+. ..... ++. +-+....++.++++.+
T Consensus 273 -~~d~~t--~sK~~~~G~~riG~~~~~~~-~~--~~~---~~~~~--------------t~~-~n~~~~~aa~aal~~~- 327 (419)
T 2eo5_A 273 -VPDVIT--LAKALGGGIMPIGATIFRKD-LD--FKP---GMHSN--------------TFG-GNALACAIGSKVIDIV- 327 (419)
T ss_dssp -CCSEEE--ECGGGGTTTSCCEEEEEEGG-GC--CC-----------------------CCC-CCHHHHHHHHHHHHHH-
T ss_pred -CCCEEE--ecccccCCccceEEEEEchH-hh--cCC---cccCC--------------CCC-CCHHHHHHHHHHHHHH-
Confidence 367664 56998876 77898887654 22 111 00000 000 0011222333344322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh
Q 046506 180 VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA 259 (310)
Q Consensus 180 ~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 259 (310)
++..++..++.+++.+.|.++ +..+ ++..+++.+.+.+. ..... +.+.|.+
T Consensus 328 ----~~~~~~~~~~~~~l~~~L~~~--~~~~-~~~g~~~~i~~~~~---------------------~~~~~-~~~~l~~ 378 (419)
T 2eo5_A 328 ----KDLLPHVNEIGKIFAEELQGL--ADDV-RGIGLAWGLEYNEK---------------------KVRDR-IIGESFK 378 (419)
T ss_dssp ----HHHHHHHHHHHHHHHHHHTTS--SSEE-EEETTEEEEECSCH---------------------HHHHH-HHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHHHHHh--hhhe-EeeeEEEEEEEecC---------------------ccHHH-HHHHHHH
Confidence 237788888999999999875 2222 23455666655331 11234 6677777
Q ss_pred cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 260 SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 260 ~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.|. .+.+. +.+++|++++ ..++++++++++++|+++++++
T Consensus 379 ~Gv-~v~~~---~~~~lRis~~-~~~t~e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 379 RGL-LLLPA---GRSAIRVIPP-LVISEEEAKQGLDILKKVIKVV 418 (419)
T ss_dssp TTE-ECEEE---TTTEEEECCC-TTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCC-EEecC---CCCEEEEECC-CCCCHHHHHHHHHHHHHHHHhc
Confidence 775 44332 2468999954 6789999999999999887653
No 182
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.57 E-value=7.6e-15 Score=134.00 Aligned_cols=232 Identities=13% Similarity=0.059 Sum_probs=129.8
Q ss_pred CHHHHHHHHHHHHHcCCCcEE-EEEeccCCccc-ccCChHHHHHHHHHhCcEEEeecccccccc-cChhhhhhhcCCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLF-LCATIGTTAIT-AVDTLKPLCDVAKQFGIWVHVDAAYAGSAC-ICPEFRHFIDGVEGA 103 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~-v~~~~~~~~~G-~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~-~~~~~~~~~~~~~~~ 103 (310)
|+++|+++ ++ .+.+ |++.+.+|++| .+.|+++|+++|++||+++++|++|+.+.. +...... .. .++
T Consensus 130 d~~~l~~~-~~------~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~-~~--~~~ 199 (374)
T 2aeu_A 130 KVGEILNK-ID------KDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPA-LK--LGA 199 (374)
T ss_dssp CHHHHHTT-CC------TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCH-HH--HTC
T ss_pred CHHHHHhc-CC------CccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCc-cc--cCC
Confidence 67888877 32 2457 77788889999 899999999999999999999999976531 1100000 11 147
Q ss_pred CeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHH
Q 046506 104 DSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANL 183 (310)
Q Consensus 104 D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 183 (310)
|+++.|+||++++| ++|+++.+++ .+....... .+... . .-.+.+..+.++++.+..+.+
T Consensus 200 di~~~S~sK~l~g~-~~G~~~~~~~-~~~~l~~~~-~~~~~-~----------------~~~~~~~a~~~al~~~~~~~~ 259 (374)
T 2aeu_A 200 DLVVTSTDKLMEGP-RGGLLAGKKE-LVDKIYIEG-TKFGL-E----------------AQPPLLAGIYRALKNFNLERI 259 (374)
T ss_dssp SEEEEETTSSSSSC-SCEEEEEEHH-HHHHHHHHH-HTTTC-B----------------CCHHHHHHHHHHHHHCCHHHH
T ss_pred cEEEecCcccccCc-ceEEEEECHH-HHHHHHHhh-ccccC-C----------------CCHHHHHHHHHHHHHHhHHHH
Confidence 99999999998776 7788776643 333221110 00000 0 000122333444444432234
Q ss_pred HHHHHHHHHH----HHHHHHHHcCC---CCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHH
Q 046506 184 RHFLRSHVNM----AKLFERLVGSD---KRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLES 256 (310)
Q Consensus 184 ~~~~~~~~~~----a~~l~~~L~~~---~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 256 (310)
++..++...+ .+.+.+.|..+ +++.+...+. +.+.++..... .. .... ..++...
T Consensus 260 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~-g~~~~~~~~~~---------------~~-~~~~-~~~~~~~ 321 (374)
T 2aeu_A 260 RKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPT-GFVIKRVYKDD---------------TI-NIKK-LIEIGFN 321 (374)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSS-EEEEEEEESSH---------------HH-HHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCc-eEEEEeecccc---------------cc-cccc-hHHHHHH
Confidence 4444444444 35556666554 3566543333 33333332211 00 0000 1123333
Q ss_pred H-HhcCcEEEEEeE-ECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 257 I-NASGKAYMTHAV-LGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 257 l-~~~g~~~~~~~~-~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
+ .+.|.....+.. ..+.+++|++++....++++++++.++|++.++++.+
T Consensus 322 ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~~ 373 (374)
T 2aeu_A 322 LLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAFK 373 (374)
T ss_dssp HHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHTC
T ss_pred HHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 3 345643332211 2235689999875555666799999999999888754
No 183
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.57 E-value=1.1e-14 Score=134.22 Aligned_cols=231 Identities=13% Similarity=0.080 Sum_probs=134.0
Q ss_pred cccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCC
Q 046506 24 YGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV 100 (310)
Q Consensus 24 ~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~ 100 (310)
+.+|+++|+ +++. +.++++++++|++|.+.| +++|+++|++||+++++|++|+.+..... +.......
T Consensus 168 ~~~d~~~l~--~~~~------~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~ 238 (417)
T 3g7q_A 168 YHVDFEHLH--IGEE------TGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGII-FSEARPLW 238 (417)
T ss_dssp EECCGGGCC--CCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCB-CSCCCCCC
T ss_pred cccCHHHhc--cccC------ceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccccc-ccccccCC
Confidence 568999988 4332 557888899999999999 89999999999999999999964321111 11101112
Q ss_pred CCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCH
Q 046506 101 EGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGV 180 (310)
Q Consensus 101 ~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 180 (310)
...+++..|++|++.....+|+++. ++............+.. ++.......+...++....
T Consensus 239 ~~~~i~~~s~sK~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~l~~~~~ 299 (417)
T 3g7q_A 239 NPNIILCMSLSKLGLPGSRCGIIIA-NDKTITAIANMNGIISL------------------APGGMGPAMMCEMIKRNDL 299 (417)
T ss_dssp CTTEEEEEESGGGTCTTSCCEEEEC-CHHHHHHHHHHHHHHCC------------------CCCSHHHHHHHHHHHTTCH
T ss_pred CCCEEEEEechhccCCCcceEEEEe-CHHHHHHHHHhhcceee------------------CCCcHHHHHHHHHHcCcch
Confidence 2467888999996444445777654 44443222111000000 0001112222223322211
Q ss_pred H-HHHH-HHHHHHHHHHHHHHHHcC-CC--CeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHH
Q 046506 181 A-NLRH-FLRSHVNMAKLFERLVGS-DK--RFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLE 255 (310)
Q Consensus 181 ~-~~~~-~~~~~~~~a~~l~~~L~~-~~--~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 255 (310)
. ...+ +.++..++.+.+.+.|.+ ++ ++.+..+.....+.+.+..... + ..++.+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~--------------~-------~~~l~~ 358 (417)
T 3g7q_A 300 LRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWFKDLPI--------------T-------TELLYQ 358 (417)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEECTTCSS--------------C-------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEcCCCCC--------------C-------HHHHHH
Confidence 1 1222 445556666677777755 44 4777645455566666653110 0 135667
Q ss_pred HHHhcCcEEEEEeEE-CC--------EeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 256 SINASGKAYMTHAVL-GG--------IYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 256 ~l~~~g~~~~~~~~~-~~--------~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
.+.+.|.....+... .+ .+++|+|+. . ++++|+.+++.|++++.++.+
T Consensus 359 ~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~-~--~~~~i~~~~~~l~~~l~~~~~ 415 (417)
T 3g7q_A 359 RLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYV-P--EPDKIEAGVKILAEEIERAWR 415 (417)
T ss_dssp HHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESC-S--CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCEEEECchhhCCCCccccccCCCeEEEEec-C--CHHHHHHHHHHHHHHHHHHHh
Confidence 776777543332211 11 469999965 2 899999999999999877643
No 184
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.57 E-value=3.9e-14 Score=131.44 Aligned_cols=238 Identities=12% Similarity=0.013 Sum_probs=133.6
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
+|+++|+++|++.. ...+.+++++..++++|.+.| +++|+++|++||+++++|++|+..........-...++
T Consensus 187 ~d~~~le~~l~~~~--~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~- 263 (433)
T 1zod_A 187 AELDYAFDLIDRQS--SGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGV- 263 (433)
T ss_dssp HHHHHHHHHHHHHC--CSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-
T ss_pred HHHHHHHHHHHhcC--CCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCC-
Confidence 57999999997531 012445666555577897766 99999999999999999999974432221111001122
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
..|+++ ..|+++++..+|++++++ +.. +.+... .+.... ++ ++-+....++.++++.+..
T Consensus 264 ~~di~s--~sK~~~~G~~ig~~~~~~-~~~-~~~~~~-~~~~~~-------------t~-~~~~~~~~a~~aal~~~~~- 323 (433)
T 1zod_A 264 TPDILT--LSKTLGAGLPLAAIVTSA-AIE-ERAHEL-GYLFYT-------------TH-VSDPLPAAVGLRVLDVVQR- 323 (433)
T ss_dssp CCSEEE--ECHHHHTTSSCEEEEECH-HHH-HHHHHT-TCCCCC-------------TT-TTCHHHHHHHHHHHHHHHH-
T ss_pred CCCEEE--ecccccCCCCeeEEEEhH-HHH-HhhccC-CCCCCC-------------CC-CcCHHHHHHHHHHHHHHHh-
Confidence 357654 559998766788888764 333 222111 111000 00 0001122233344443322
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC----CCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGS----DKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESI 257 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~----~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (310)
+...++..++.+++++.|++ .+.+... ++..+++.+.+...... ..+ + .....++.+.+
T Consensus 324 --~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~~g~~~~i~~~~~~~~---------~~~-~----~~~~~~~~~~l 386 (433)
T 1zod_A 324 --DGLVARANVMGDRLRRGLLDLMERFDCIGDV-RGRGLLLGVEIVKDRRT---------KEP-A----DGLGAKITREC 386 (433)
T ss_dssp --TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEEEEETTT---------TEE-C----TTHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEEecCccc---------cCC-C----hHHHHHHHHHH
Confidence 23556666777777777765 3444333 23455666665431000 000 0 01124566777
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.+.|.+..........+++|++++ ..+++++++.++++|++.+.++
T Consensus 387 ~~~Gv~v~~~~~~~~~~~lRi~~~-~~~t~~~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 387 MNLGLSMNIVQLPGMGGVFRIAPP-LTVSEDEIDLGLSLLGQAIERA 432 (433)
T ss_dssp HHTTEECCEECCTTSCCEEEECCC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCeEeccCCCCCCCEEEEECC-cCCCHHHHHHHHHHHHHHHHHh
Confidence 777754333221122378999855 5789999999999999887654
No 185
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.57 E-value=5.2e-14 Score=134.36 Aligned_cols=276 Identities=8% Similarity=0.021 Sum_probs=151.3
Q ss_pred ceecCCCCCCEEEEecCC--CCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChH---HHHHHHH-HhCcE
Q 046506 3 AQIVGIDVKNFRAIKTTK--SSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLK---PLCDVAK-QFGIW 76 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~--~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~---~I~~l~~-~~g~~ 76 (310)
++..|.+ ++.++++. +.++.+|+++|++++++. +.+|++++++|++|.+.|.+ +|+++|+ +||++
T Consensus 210 ~~~~g~~---~~~v~~~~~~~~~~~~d~~~l~~~l~~~------~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~ 280 (533)
T 3f6t_A 210 PELKDYE---LVEVDLHSYEKNDWEIEPNEIEKLKDPS------IKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLM 280 (533)
T ss_dssp GGGGGSE---EEEECCCEETTTTSEECHHHHHHHSCTT------EEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCE
T ss_pred HHHcCCe---EEEEEecCCcccCCCCCHHHHHHHhCCC------CeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCE
Confidence 4456666 88888864 335789999999998653 45777788899999998876 7888888 68999
Q ss_pred EEeecccccccccChhhhhhhcCCCCCCeeeeecccccccccc--eEEEEEeCchhHHhhhccCCc---------ccccc
Q 046506 77 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVKDPSDLVNSLSTNPE---------YLKNK 145 (310)
Q Consensus 77 l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~~~~~~~~~~~~~~~---------y~~~~ 145 (310)
+++|.+|+............ ..+.++++.|++|.++.| | +|++++++...+.+.....++ |....
T Consensus 281 li~De~y~~~~~~~~~~~~~---~~~~~i~~~S~SK~~g~~-G~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~ 356 (533)
T 3f6t_A 281 IISDEVYGAFVPNFKSIYSV---VPYNTMLVYSYSKLFGCT-GWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVV 356 (533)
T ss_dssp EEEECTTGGGSTTCCCHHHH---SGGGEEEEEESHHHHTCG-GGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTC
T ss_pred EEEcCCccccccCccCHhhc---CCCCEEEEecCcccCCCc-ccceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccc
Confidence 99999997554322111111 113458889999998744 5 788888776433322211110 00000
Q ss_pred c-cccccc--------cCCCCceeccCCCcchHH-HHHHHHHh--------CHHHHHHHHHHHHHHHHHHHHHHcCCCCe
Q 046506 146 A-TESKQV--------VDYKDWQITLSRRFRSLK-LWFVLRNY--------GVANLRHFLRSHVNMAKLFERLVGSDKRF 207 (310)
Q Consensus 146 ~-~~~~~~--------~~~~~~~~~~~~~~~~~~-~~~~l~~~--------~~~~~~~~~~~~~~~a~~l~~~L~~~~~~ 207 (310)
. +..... .........+........ ...++..+ ....++++.++..++.+.+.+.|. + ++
T Consensus 357 ~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~-~~ 434 (533)
T 3f6t_A 357 LDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-A-PK 434 (533)
T ss_dssp SCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-C-CC
T ss_pred cCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-C-Cc
Confidence 0 000000 000000000000011111 00122333 235667788888899999999997 5 45
Q ss_pred EEecCCCceEE-EEEEcCCcchhhhhhhhccccchhHHHH-----HHHHHHHHHHHH-hcCcEEEEEeEEC-CEeEEEEE
Q 046506 208 EVVFPRHFAVV-CFRVSPSAVMDKLKTKYENSLLSEEERI-----NEFNRELLESIN-ASGKAYMTHAVLG-GIYAIRFA 279 (310)
Q Consensus 208 ~v~~~~~~~~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~l~-~~g~~~~~~~~~~-~~~~iRis 279 (310)
.+. ++..+.. .+.+.... .. +...+.. .....++..++. +.|.+...+.... +.+.+|+|
T Consensus 435 ~~~-~~~~g~~~~~~l~~~~-~~----------~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls 502 (533)
T 3f6t_A 435 DET-DTNTHYYSLIDIYRLA-EK----------IYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVS 502 (533)
T ss_dssp CCS-TTBCCSEEEEEHHHHH-HH----------HHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEE
T ss_pred ccc-CCCceEEEEEehHhhh-hh----------ccchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEE
Confidence 543 3444333 33332100 00 0000000 000123334443 4565433322222 35689999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHhhc
Q 046506 280 AGATLTEERHVMVAWTVVQEHLEALLSA 307 (310)
Q Consensus 280 ~~~~~~t~edi~~li~~l~~~~~~~~~~ 307 (310)
+.+ .++++++.++++|++++.++.+.
T Consensus 503 ~a~--~~~e~i~~~i~~L~~~l~~~~~~ 528 (533)
T 3f6t_A 503 QAN--LPTEDYALIGKQVLELLKEYYEE 528 (533)
T ss_dssp SSS--SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred Eee--CCHHHHHHHHHHHHHHHHHHHHH
Confidence 753 57889999999999999877543
No 186
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.56 E-value=1.8e-13 Score=127.80 Aligned_cols=224 Identities=10% Similarity=0.022 Sum_probs=133.2
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
.++++|+++|++.. ..+.+|+++..++++|.+.| +++|+++|++||+++++|++|++.......+.-...++
T Consensus 216 ~~~~~le~~i~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~- 291 (449)
T 2cjg_A 216 EALRQARAAFETRP---HDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDV- 291 (449)
T ss_dssp HHHHHHHHHHHHST---TTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTC-
T ss_pred HHHHHHHHHHHhcC---CceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCC-
Confidence 56778999997421 12457777777788898777 99999999999999999999975432221110001122
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
..|++++ .|++ | +|++++++ +.. +.+. +.+...... ..++ ++-+....++.++++.+..
T Consensus 292 ~~di~t~--sK~l--~--iG~~~~~~-~~~-~~l~--~~~~~~~~~---------~~t~-~~n~~~~~aa~aal~~~~~- 350 (449)
T 2cjg_A 292 APDIVAF--GKKT--Q--VCGVMAGR-RVD-EVAD--NVFAVPSRL---------NSTW-GGNLTDMVRARRILEVIEA- 350 (449)
T ss_dssp CCSEEEE--CGGG--S--SEEEEECG-GGG-GSTT--CTTTSTTSS---------CCSS-SSCHHHHHHHHHHHHHHHH-
T ss_pred CceEEEe--cCcc--c--EEEEEECH-HHh-hhhh--hcccCCccc---------ccCC-CCCHHHHHHHHHHHHHHHh-
Confidence 3687765 5998 5 67777654 333 2110 001100000 0000 1111222333344443322
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC----CCC-eEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGS----DKR-FEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLES 256 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~----~~~-~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 256 (310)
+++.++..++.+++++.|.+ .|. +... .+..+++.+.+... ....++.+.
T Consensus 351 --~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~~~g~~~~~~~~~~----------------------~~~~~~~~~ 405 (449)
T 2cjg_A 351 --EGLFERAVQHGKYLRARLDELAADFPAVVLDP-RGRGLMCAFSLPTT----------------------ADRDELIRQ 405 (449)
T ss_dssp --HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEE-EEETTEEEEECSSH----------------------HHHHHHHHH
T ss_pred --ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-eeccEEEEEEECCh----------------------HHHHHHHHH
Confidence 34667777888888888875 354 5433 23455666655431 112467777
Q ss_pred HHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 257 INASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 257 l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
|.++|. .+.+. +.+++|++++ ..+|++|++.++++|++.+..+
T Consensus 406 l~~~Gv-~v~~~---g~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 406 LWQRAV-IVLPA---GADTVRFRPP-LTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp HHHTTE-ECEEE---TTTEEEECCC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCe-EEecC---CCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 777774 44432 3578999954 6799999999999999887653
No 187
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.56 E-value=2.7e-14 Score=132.28 Aligned_cols=221 Identities=12% Similarity=0.077 Sum_probs=135.0
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccc----cCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITA----VDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~----~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++|+++|++. +.+|+++..++..|. ..++++|+++|++||+++++|++|.+.........-...++ .
T Consensus 190 d~~~le~~i~~~------~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~-~ 262 (420)
T 2pb2_A 190 DLHAVKAVMDDH------TCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGV-T 262 (420)
T ss_dssp CHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC-C
T ss_pred CHHHHHHHhccC------ceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCC-C
Confidence 789999998743 456777766676675 36799999999999999999999964322221110001122 3
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
.|+++ .+|+++++..+|+++++++ .. +.+.. . ... .++ ++-+..+.++.++++.+..
T Consensus 263 ~diit--~sK~l~~G~~iG~~~~~~~-l~-~~l~~--~---~~~-----------~t~-~~~~~~~aa~~a~L~~~~~-- 319 (420)
T 2pb2_A 263 PDILT--SAKALGGGFPVSAMLTTQE-IA-SAFHV--G---SHG-----------STY-GGNPLACAVAGAAFDIINT-- 319 (420)
T ss_dssp CSEEE--ECGGGGTTSCCEEEEECHH-HH-TTCC---------C-----------CEE-CCCHHHHHHHHHHHHHHSS--
T ss_pred CCeEE--ecccccCCCceEEEEEhHH-HH-HhhcC--C---CcC-----------ccc-CcCHHHHHHHHHHHHHHHh--
Confidence 78775 5799996666898887644 32 22211 0 000 011 1111223344455554433
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC----CCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHH
Q 046506 183 LRHFLRSHVNMAKLFERLVGSD----KRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESIN 258 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~----~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 258 (310)
+++.++..++.+++.+.|+++ |.+... ++..+++.+.+.... .....++.+.|.
T Consensus 320 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~v~~~~~~--------------------~~~~~~l~~~l~ 377 (420)
T 2pb2_A 320 -PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDI-RGMGLLIGAELKPKY--------------------KGRARDFLYAGA 377 (420)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE-EEETTEEEEEECGGG--------------------TTCHHHHHHHHH
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecceEEEEEECCCc--------------------hHHHHHHHHHHH
Confidence 456677778888888888654 433322 234566667664310 000135667777
Q ss_pred hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 259 ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 259 ~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+.|. .+.+. +.+.+|++++ ..++++|+++++++|+++++++
T Consensus 378 ~~Gi-~v~~~---~~~~iRl~~~-~~~t~eei~~~~~~l~~~l~~~ 418 (420)
T 2pb2_A 378 EAGV-MVLNA---GADVMRFAPS-LVVEEADIHEGMQRFAQAVGKV 418 (420)
T ss_dssp HTTE-ECEES---STTEEEECCC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred HCCC-EEEeC---CCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHH
Confidence 7764 44332 3568999965 5789999999999999988765
No 188
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.56 E-value=1.6e-13 Score=127.10 Aligned_cols=180 Identities=12% Similarity=0.074 Sum_probs=118.8
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEec----cCCcccccCChHHHHHHHHH--hCcEEE
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATI----GTTAITAVDTLKPLCDVAKQ--FGIWVH 78 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~----~~~~~G~~~pl~~I~~l~~~--~g~~l~ 78 (310)
..|+. ++.+|. + ++.+|+++|+++|++.. .+.+|++.+ ++|++|.+.|+++|+++|++ +|++++
T Consensus 147 ~~G~~---~~~v~~-~--~~~~d~e~l~~~i~~~~----~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~li 216 (427)
T 3hvy_A 147 EYGVK---YKMVDL-K--DGKVDINTVKEELKKDD----SIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVF 216 (427)
T ss_dssp GGTCE---EEECCC-B--TTBCCHHHHHHHHHHCT----TEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEE
T ss_pred HcCCE---EEEecC-C--CCCcCHHHHHHHhhCCC----CCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEE
Confidence 34665 788887 3 34899999999998411 256888888 88999999999999999999 899999
Q ss_pred eecccccccccChhhhhhhcCCCCCCeeeeeccccccc---ccceEEEEEeCchhHHhhhcc-CCccccccccccccccC
Q 046506 79 VDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFT---TLDCCCLWVKDPSDLVNSLST-NPEYLKNKATESKQVVD 154 (310)
Q Consensus 79 vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~---p~g~g~l~v~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~ 154 (310)
||++|+.+....... . .++|+++.|+||++++ |.| |+++. +++.+++.... ....+..
T Consensus 217 vD~a~~~~~~~~~p~---~---~gaDiv~~S~sK~lgg~g~~~G-G~i~~-~~~li~~l~~~~~~~~~g~---------- 278 (427)
T 3hvy_A 217 VDNCYGEFVEEKEPT---D---VGADIIAGSLIKNIGGGIATTG-GYIAG-KEEYVTQATFRVTVPGIGG---------- 278 (427)
T ss_dssp EECTTCTTTSSSCGG---G---GTCSEEEEETTSGGGTTTCCSC-EEEEE-CHHHHHHHHHHHSCTTTGG----------
T ss_pred EECCccccccCCCCc---c---cCCeEEEECCcccccccccceE-EEEEE-CHHHHHHHHHHhhcCCccc----------
Confidence 999998665322111 1 1589999999999987 433 55554 45444333210 1011100
Q ss_pred CCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCce-----EEEEEEcC
Q 046506 155 YKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFA-----VVCFRVSP 224 (310)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~-----~v~~~~~~ 224 (310)
..+-.+.. .+.+++ +......++++..++++++++.|+++ ++++... ... +++|.+..
T Consensus 279 ------~~~~~~~~--a~~~~~--gl~~~~~r~~~~~~~a~~la~~L~~~-g~~V~p~-~~~~~~~li~~~~l~~ 341 (427)
T 3hvy_A 279 ------ECGSTFGV--MRSLYE--GLFMAPHVTIEAVKGAVFCARIMELA-GFDVLPK-YNDKRTDIIQAIKFND 341 (427)
T ss_dssp ------GCCCCTTC--HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEESC-TTSCCSSSEEEEECSS
T ss_pred ------ccCCCHHH--HHHHHH--hHhHHHHHHHHHHHHHHHHHHHHHhC-CCeecCC-CCCCCceEEEEEeCCC
Confidence 01100111 233332 33455678889999999999999987 6777532 333 77777753
No 189
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.56 E-value=5.9e-14 Score=126.46 Aligned_cols=228 Identities=9% Similarity=-0.037 Sum_probs=142.5
Q ss_pred ceecCCCCCCEEEEec-CCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhC-cEEEee
Q 046506 3 AQIVGIDVKNFRAIKT-TKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFG-IWVHVD 80 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~-~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g-~~l~vD 80 (310)
++..|.. ++.+|. ++.+ .+++ +. +.+|++++++|++|.+.|+++|.++|+.++ .++++|
T Consensus 106 ~~~~g~~---~~~v~~~~~~~--~~~~--------~~------~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~D 166 (350)
T 3fkd_A 106 CRMYEHE---VCFYPSNEDIG--EADF--------SN------MDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLD 166 (350)
T ss_dssp HHHTTCE---EEEEETTSCGG--GSCC--------TT------CSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEE
T ss_pred HHHcCCe---EEEEecCCccc--cCcc--------CC------CCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEE
Confidence 3456666 899998 6533 4555 11 447788899999999999999999999876 799999
Q ss_pred cccccccccChhhhhhhcCCCCCCeeeeeccccccc-ccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCce
Q 046506 81 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFT-TLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 81 ~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~-p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 159 (310)
++|+.............. ....++++.|++|+++. ....|+++. ++............+
T Consensus 167 ea~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~------------------ 226 (350)
T 3fkd_A 167 QSYVSFTTEEVIRPADIK-GRKNLVMVYSFSHAYGIPGLRIGYIVA-NKDFMKRVAAFSTPW------------------ 226 (350)
T ss_dssp CTTTTSCSSCCCCGGGGT-TCSSEEEEEESHHHHSCGGGCCEEEEC-CHHHHHHHHTTCCTT------------------
T ss_pred CchhhhccCcchhhHHhh-cCCCEEEEecCchhccCcchheEeEEe-CHHHHHHHHHhCCCC------------------
Confidence 999754432211111111 12345788899999984 356787776 554443322211110
Q ss_pred eccCCCcchHHHHHHHHHhCH-HHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccc
Q 046506 160 ITLSRRFRSLKLWFVLRNYGV-ANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENS 238 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 238 (310)
....+..+++...+.. +.+.+..++..++++++.+.|+++|++++. ++..+.+.+.+...+
T Consensus 227 -----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~------------ 288 (350)
T 3fkd_A 227 -----AVNALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGVEVH-PSGTTFFLLRLKKGT------------ 288 (350)
T ss_dssp -----CSCHHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHHSTTEEEC-CCSSSEEEEEESSSC------------
T ss_pred -----CCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEC-CCCCcEEEEECCCCC------------
Confidence 0122223333332211 113333444448889999999888899885 556667767776421
Q ss_pred cchhHHHHHHHHHHHHHHHHh-cCcEEEEEe-EEC--CEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 239 LLSEEERINEFNRELLESINA-SGKAYMTHA-VLG--GIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~-~~~--~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
..++.+.|.+ .|. .+.+. ... +.+++|+|+. +++++++++++|+++...
T Consensus 289 -----------~~~l~~~L~~~~gi-~v~~g~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 289 -----------AAELKKYMLEEYNM-LIRDASNFRGLDESYVRITTQ----RPAQNQLFIKALETFLEK 341 (350)
T ss_dssp -----------HHHHHHHHHHTTCE-ECEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHHHTC
T ss_pred -----------HHHHHHHHHHHCCE-EEEeCccCCCCCCCEEEEEcC----CHHHHHHHHHHHHHHHHH
Confidence 1467777877 664 44433 221 2579999943 688999999999988753
No 190
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.55 E-value=3.3e-13 Score=125.42 Aligned_cols=232 Identities=10% Similarity=-0.048 Sum_probs=133.0
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++|+++|++.. ...+.++++...++++|.+.| +++|+++|++||+++++|.+|++.............++ .
T Consensus 186 d~~~le~~l~~~~--~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~-~ 262 (439)
T 3dxv_A 186 ILTLLTEKLAAVP--AGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGF-V 262 (439)
T ss_dssp HHHHHHHHHHTSC--TTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTC-C
T ss_pred HHHHHHHHHHhcC--CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCC-C
Confidence 7899999995210 112557777777888999988 99999999999999999999974322111111001122 3
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
.|.+ +..|++++....|+++.++. .+ +.+... .+ . .++ ...++..+++..+....
T Consensus 263 ~di~--s~sK~~~~G~riG~~~~~~~-~~-~~~~~~-~~----~-----------~t~-----~~~~~~~aa~aal~~~~ 317 (439)
T 3dxv_A 263 PDIL--VLGKGLGGGLPLSAVIAPAE-IL-DCASAF-AM----Q-----------TLH-----GNPISAAAGLAVLETID 317 (439)
T ss_dssp CSEE--EECGGGGTTSCCEEEEEEHH-HH-TSCSSS-SC----C-----------TTT-----TCHHHHHHHHHHHHHHH
T ss_pred CCEE--EEcchhcCCcceEEEEECHH-HH-hhhcCC-Cc----C-----------CCc-----ccHHHHHHHHHHHHHHH
Confidence 6766 55699986445787776533 32 222110 00 0 001 12233333333221111
Q ss_pred HHHHHHHHHHHHHHHHHHHcC----CCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHH
Q 046506 183 LRHFLRSHVNMAKLFERLVGS----DKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESIN 258 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~----~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 258 (310)
.+++.++..++.+++++.|.+ .+.+... ++..+++.+.+...... ..+ + .....++.+.+.
T Consensus 318 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~---------~~~-~----~~~~~~~~~~l~ 382 (439)
T 3dxv_A 318 RDDLPAMAERKGRLLRDGLSELAKRHPLIGDI-RGRGLACGMELVCDRQS---------REP-A----RAETAKLIYRAY 382 (439)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEEEEETTT---------TEE-C----HHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEEecCccc---------cCC-C----HHHHHHHHHHHH
Confidence 144556666666666666654 4555443 33455666665321000 000 0 122346677777
Q ss_pred hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 259 ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 259 ~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
++|.+..... ....++|++++ ...++++++.++++|++++.++
T Consensus 383 ~~Gv~v~~~~--~~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~~~ 425 (439)
T 3dxv_A 383 QLGLVVYYVG--MNGNVLEFTPP-LTITETDIHKALDLLDRAFSEL 425 (439)
T ss_dssp HHTEECEEES--TTSCEEEECCC-TTCCHHHHHHHHHHHHHHHHTG
T ss_pred HCCcEEeecC--CCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHH
Confidence 7875443321 22478999955 6789999999999999988765
No 191
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.55 E-value=5.2e-13 Score=125.60 Aligned_cols=220 Identities=14% Similarity=0.110 Sum_probs=128.2
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC-
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE- 101 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~- 101 (310)
|+++|+++|++....+..+.+|++....+++|.+.| +++|+++|++||+++|+|++|.+.........-...++.
T Consensus 241 d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~ 320 (472)
T 1ohv_A 241 CLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDD 320 (472)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSS
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCC
Confidence 789999999874321112567777777888999888 999999999999999999999743221110000011211
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
.+|+++++ |++. |.|++ + ++. +.. ..+.+... + .++-+..+.++.++++.+..
T Consensus 321 ~~Di~t~s--K~~l---~GG~~-~-~~~-~~~---~~~~~~~~--------------T-~~~~~~~~aaa~aal~~~~~- 373 (472)
T 1ohv_A 321 PADVMTFS--KKMM---TGGFF-H-KEE-FRP---NAPYRIFN--------------T-WLGDPSKNLLLAEVINIIKR- 373 (472)
T ss_dssp CCSEEEEC--GGGS---SEEEE-E-CGG-GSC---SSSSSSCC--------------S-SSSCHHHHHHHHHHHHHHHH-
T ss_pred CCCEEEEc--cccc---cCCcc-C-chh-hcc---cccccccC--------------c-cCccHHHHHHHHHHHHHHHh-
Confidence 27877665 9841 12444 4 332 210 11111100 0 01111222334455554422
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC----CC-eEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSD----KR-FEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLES 256 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~----~~-~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 256 (310)
+.+.++..++.+++++.|.++ |+ +.-+ .+...++.+.+.. ......+.+.
T Consensus 374 --~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~-~~~g~~~~~~~~~----------------------~~~~~~~~~~ 428 (472)
T 1ohv_A 374 --EDLLSNAAHAGKVLLTGLLDLQARYPQFISRV-RGRGTFCSFDTPD----------------------ESIRNKLISI 428 (472)
T ss_dssp --TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEE-EEETTEEEEECSS----------------------HHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEee-cCCceEEEEEeCC----------------------hhHHHHHHHH
Confidence 345677777888888887653 43 3322 1234455554432 1123467777
Q ss_pred HHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 257 INASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 257 l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
|.++|. .+.+. +.++||++++ +.+|++||+.++++|++++.+
T Consensus 429 l~~~Gv-~~~~~---g~~~iRi~~~-~~~t~e~i~~~~~~l~~~l~~ 470 (472)
T 1ohv_A 429 ARNKGV-MLGGC---GDKSIRFRPT-LVFRDHHAHLFLNIFSDILAD 470 (472)
T ss_dssp HHHTTE-ECEEE---TTTEEEECCC-TTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHCCe-EEecC---CCCEEEEECC-CCCCHHHHHHHHHHHHHHHHh
Confidence 777775 43332 3468999955 679999999999999988754
No 192
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.54 E-value=1.5e-13 Score=126.60 Aligned_cols=242 Identities=11% Similarity=0.044 Sum_probs=137.2
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcE-EEEEecc-CCcccccCChHHHH---HHHH------
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPL-FLCATIG-TTAITAVDTLKPLC---DVAK------ 71 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~-~v~~~~~-~~~~G~~~pl~~I~---~l~~------ 71 (310)
++..|.. ++.+|.++. ++.+|+++|+++|++..... +. ++++..+ +|++|.+.|.+++. ++|+
T Consensus 142 ~~~~g~~---~~~~~~~~~-~~~~d~~~l~~~l~~~~~~~--~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~ 215 (413)
T 3t18_A 142 CEEFGRN---FKTFEFFTD-DFAFNIDVYKEAIDEGIRDS--DRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDK 215 (413)
T ss_dssp HHHHTCE---EEEECCBCT-TSSBCHHHHHHHHHHHHHHC--SEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTST
T ss_pred HHHhCCe---EEEeeccCC-CCCcCHHHHHHHHHHHhhcC--CCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhcc
Confidence 3456666 889998543 36899999999998642211 33 5666666 89999998866655 5555
Q ss_pred HhCcEEEeecccccccccChhhhhhhcCCC--CCC---eeeeecccccccc-cceEEEEEe--CchhHHhhhccCCcccc
Q 046506 72 QFGIWVHVDAAYAGSACICPEFRHFIDGVE--GAD---SFSLNAHKWFFTT-LDCCCLWVK--DPSDLVNSLSTNPEYLK 143 (310)
Q Consensus 72 ~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~--~~D---~~~~~~hK~l~~p-~g~g~l~v~--~~~~~~~~~~~~~~y~~ 143 (310)
+||+++++|.+|.................. ..+ ++..|++|.++.| ..+|+++.. +++......... .+..
T Consensus 216 ~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~-~~~~ 294 (413)
T 3t18_A 216 DKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSKEIIEEFEASL-AHSA 294 (413)
T ss_dssp TCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCHHHHHHHHHHH-HHHH
T ss_pred CCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCCHHHHHHHHHHH-HHhh
Confidence 899999999998655433221111111111 123 5667999999844 346777652 454432221100 0000
Q ss_pred ccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH-------HHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCce
Q 046506 144 NKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA-------NLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFA 216 (310)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~ 216 (310)
.. .......++..++...+... ..+++.++..++.+++.+.|.++ ++++. ++..+
T Consensus 295 ~~----------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~~~~ 356 (413)
T 3t18_A 295 RC----------------NWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKEN-KLTMI-PYFGG 356 (413)
T ss_dssp HH----------------HTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCB-CCCSS
T ss_pred hc----------------cccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCcc-CCCce
Confidence 00 00001223333344334322 33456677888888999999887 77765 34444
Q ss_pred EEEE-EEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHH
Q 046506 217 VVCF-RVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWT 295 (310)
Q Consensus 217 ~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~ 295 (310)
++.+ .... ..++.+.|.+.|. .+.+ +.+++|+|+.. .+++ ++ ++
T Consensus 357 ~~~~~~~~~-------------------------~~~~~~~l~~~gv-~v~~----g~~~iRis~~~-~~~~-~~---l~ 401 (413)
T 3t18_A 357 FFTFIPTDK-------------------------AFDIVKDLEKENI-FTIP----SAKGIRVAICG-VGEE-KI---PK 401 (413)
T ss_dssp SCEEEECSC-------------------------HHHHHHHHHHTTE-ECEE----CSSEEEECTTT-SCGG-GH---HH
T ss_pred EEEEeCCCC-------------------------HHHHHHHHHhCCE-EEec----CCCceEEEEee-CCHH-HH---HH
Confidence 3333 2211 1356666766764 4444 25689999763 3444 33 55
Q ss_pred HHHHHHHHH
Q 046506 296 VVQEHLEAL 304 (310)
Q Consensus 296 ~l~~~~~~~ 304 (310)
.|.+.+.++
T Consensus 402 ~l~~~l~~~ 410 (413)
T 3t18_A 402 LVQRLAFYT 410 (413)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555544
No 193
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.54 E-value=8.8e-13 Score=122.97 Aligned_cols=235 Identities=14% Similarity=0.075 Sum_probs=132.9
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCC
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGA 103 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 103 (310)
+++|+++|++... ..+.+|+++..++++|.+.| +++|+++|++||+++++|++|++.........-...++ ..
T Consensus 205 ~~~le~~l~~~~~--~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~-~~ 281 (449)
T 3a8u_X 205 ADELLKLIELHDA--SNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGV-TP 281 (449)
T ss_dssp HHHHHHHHHHHCG--GGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTC-CC
T ss_pred HHHHHHHHHhcCC--CCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCC-CC
Confidence 9999999975310 01456666666677898888 99999999999999999999953322111101001122 36
Q ss_pred Ceeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCC-cchHHHHHHHHHhCHH
Q 046506 104 DSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRR-FRSLKLWFVLRNYGVA 181 (310)
Q Consensus 104 D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~ 181 (310)
|++ +.+|++++. ...|++++++ +..........+ .... .+ ......+.. ..+.++.++++.+..
T Consensus 282 di~--s~sK~l~~G~~~~G~~~~~~-~~~~~l~~~~~~---~~~~------~~-~~~~t~~~~~~~~aa~~aal~~~~~- 347 (449)
T 3a8u_X 282 DLM--CIAKQVTNGAIPMGAVIAST-EIYQTFMNQPTP---EYAV------EF-PHGYTYSAHPVACAAGLAALCLLQK- 347 (449)
T ss_dssp SEE--EECGGGGTTSSCCEEEEEEH-HHHHHHHTCSSC---TTSC------SS-CCCCTTTTCHHHHHHHHHHHHHHHH-
T ss_pred CEE--EEcccccCCCCceEEEEECH-HHHHHhhccCcc---cccc------cc-cccCCCcccHHHHHHHHHHHHHHHh-
Confidence 766 445998752 2288887764 343322111000 0000 00 000000111 122233344443322
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCeEEec--CCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSDKRFEVVF--PRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA 259 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 259 (310)
+++.++..++.+++++.|.+++++.++. ++..+++.+.+..... .. .....++.+.|.+
T Consensus 348 --~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~--------------~~---~~~~~~~~~~l~~ 408 (449)
T 3a8u_X 348 --ENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDG--------------DA---IVRPFEAGMALWK 408 (449)
T ss_dssp --TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTT--------------BS---SHHHHHHHHHHHH
T ss_pred --cCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCcc--------------cc---cccHHHHHHHHHH
Confidence 3567778888889999887643232111 2345667777654210 00 0001246677777
Q ss_pred cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 260 SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 260 ~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+|. .+.+. + +.+|++++ ..++++|+++++++|++++.++
T Consensus 409 ~Gv-~v~~~---g-~~iRis~~-~~~t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 409 AGF-YVRFG---G-DTLQFGPT-FNSKPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp HTE-ECEEE---T-TEEEECCC-TTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCc-EEecC---C-CEEEEECC-CcCCHHHHHHHHHHHHHHHHHH
Confidence 764 44433 3 78999965 5799999999999999987653
No 194
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.54 E-value=1.1e-12 Score=123.35 Aligned_cols=237 Identities=11% Similarity=0.012 Sum_probs=138.3
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhh-hcCCCC
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF-IDGVEG 102 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~-~~~~~~ 102 (310)
+++||++|.+... ..+.+|++....++.|.+.| +++|+++|++||++|++|.+|.+.......+.-. ..++ .
T Consensus 207 ~~~le~~i~~~~~--~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v-~ 283 (476)
T 3i5t_A 207 VQEFEDRIESLGP--DTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGV-V 283 (476)
T ss_dssp HHHHHHHHHHHCG--GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCC-C
T ss_pred HHHHHHHHHhcCC--CCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCC-C
Confidence 7899999975311 12457777777788887666 9999999999999999999997653332211111 1222 3
Q ss_pred CCeeeeecccccccc-cceEEEEEeCchhHHhhhccCC----ccccccccccccccCCCCceeccCCCcchHHHHHHHHH
Q 046506 103 ADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNP----EYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRN 177 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~----~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 177 (310)
.|+++++ |++++. ...|+++.+ ++.. +.+.... .+.. ..+.....+++.+++..
T Consensus 284 pdi~t~s--K~l~~G~~plg~v~~~-~~i~-~~~~~~~~~~~~~~~-----------------~~t~~~np~a~aAa~aa 342 (476)
T 3i5t_A 284 PDIITFA--KGVTSGYVPLGGLAIS-EAVL-ARISGENAKGSWFTN-----------------GYTYSNQPVACAAALAN 342 (476)
T ss_dssp CSEEEEC--GGGGTTSSCCEEEEEC-HHHH-HTTSGGGCTTCEECC-----------------CCTTTTCHHHHHHHHHH
T ss_pred cchhhhh--hhhcCCCcCeEEEEEC-HHHH-HHHhcCCcccccccc-----------------cCCCCcCHHHHHHHHHH
Confidence 6877664 998865 456777664 4333 3322110 0000 00011123333333333
Q ss_pred hCHHHHHHHHHHHHHHHHHHHHHHcCC---CCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHH
Q 046506 178 YGVANLRHFLRSHVNMAKLFERLVGSD---KRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELL 254 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~a~~l~~~L~~~---~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 254 (310)
+..-.-+++.++..++.+++++.|+++ |.+..+ .+...++.+.+...... ..+.. ........+.
T Consensus 343 L~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-~~~G~~~~i~~~~~~~~---------~~~~~--~~~~~~~~~~ 410 (476)
T 3i5t_A 343 IELMEREGIVDQAREMADYFAAALASLRDLPGVAET-RSVGLVGCVQCLLDPTR---------ADGTA--EDKAFTLKID 410 (476)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHTTTTSTTEEEE-EEETTEEEEEECCC--------------CCH--HHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecCceeEEEEecCccc---------ccccc--chhHHHHHHH
Confidence 311112456777778888888888754 344333 23344566666542100 00000 0012345677
Q ss_pred HHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 255 ESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 255 ~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
+.+.++|.+ +.+. + +++|++++ ...|+++++.++++|++.+.++.+
T Consensus 411 ~~l~~~Gv~-v~~~---g-~~iRi~p~-l~~t~e~i~~~l~~l~~~l~~~~~ 456 (476)
T 3i5t_A 411 ERCFELGLI-VRPL---G-DLCVISPP-LIISRAQIDEMVAIMRQAITEVSA 456 (476)
T ss_dssp HHHHHTTEE-CEEE---T-TEEEECCC-TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCE-EEec---C-CEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 788888754 3332 3 78999955 678999999999999999987654
No 195
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.54 E-value=4.5e-13 Score=125.48 Aligned_cols=242 Identities=10% Similarity=0.024 Sum_probs=133.7
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCC
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGA 103 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 103 (310)
+++||++|.+... ..+.+|++...+++.|.+.| +++|+++|++||++|++|.+|.+.............++ ..
T Consensus 207 ~~~le~~i~~~~~--~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~-~p 283 (460)
T 3gju_A 207 ADKLEEMILAEGP--ETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGI-KP 283 (460)
T ss_dssp HHHHHHHHHHHCG--GGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTC-CC
T ss_pred HHHHHHHHHhcCC--CCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CC
Confidence 6899999975211 12457777777788888776 99999999999999999999975433221111001122 36
Q ss_pred Ceeeeecccccccc-cceEEEEEeCchhHHhhhccC----CccccccccccccccCCCCceeccCCCcchHHHHHHHHHh
Q 046506 104 DSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTN----PEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNY 178 (310)
Q Consensus 104 D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~----~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 178 (310)
|++++ .|++++. ...|+++.+++ .. +.+... ..+.... ++ ++-+..+.+..++++.+
T Consensus 284 di~t~--sK~l~gG~~~lg~v~~~~~-i~-~~~~~~~~~~~~~~~~~-------------t~-~~~~~~~aaa~aal~~~ 345 (460)
T 3gju_A 284 DLITI--AKGLTSAYAPLSGVIVADR-VW-QVLVQGSDKLGSLGHGW-------------TY-SAHPICVAAGVANLELI 345 (460)
T ss_dssp SEEEE--CGGGTTTSSCCEEEEEEHH-HH-HHHHHHHHHHCSCSCCC-------------TT-TTCHHHHHHHHHHHHHH
T ss_pred Ceeee--ehhhcCCCCCeEEEEECHH-HH-HHHhcccccccccccCC-------------CC-CCCHHHHHHHHHHHHHH
Confidence 77765 4998774 35677776544 33 222100 0000000 00 00011223333444433
Q ss_pred CHHH-HHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHH
Q 046506 179 GVAN-LRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESI 257 (310)
Q Consensus 179 ~~~~-~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (310)
..+. +++..+....+.+.+.+.+.+.|.+..+ .+...++.+.+...... ..+.... .....++.+.+
T Consensus 346 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~---------~~~~~~~--~~~~~~~~~~l 413 (460)
T 3gju_A 346 DEMDLVTNAGETGAYFRAELAKAVGGHKNVGEV-RGDGMLAAVEFVADKDD---------RVFFDAS--QKIGPQVATAL 413 (460)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEE-EEETTEEEEEECSBTTT---------TBCCCGG--GCHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-eeeeEEEEEEEccCccc---------cccccch--HHHHHHHHHHH
Confidence 2222 3333333334444455555566655544 23345666666532100 0000000 11234677778
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
.++|.+. .+.. ..+++||+++ ...|+++++.++++|++.+.++.+
T Consensus 414 ~~~Gv~v-~~~~--~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~~~~~ 458 (460)
T 3gju_A 414 AASGVIG-RAMP--QGDILGFAPP-LCLTREQADIVVSKTADAVKSVFA 458 (460)
T ss_dssp HHTTEEC-EECS--SSCEEEECCC-TTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHCCeEE-ecCC--CCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 8888543 3321 3478999955 578999999999999999887653
No 196
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.54 E-value=8.7e-14 Score=127.73 Aligned_cols=224 Identities=12% Similarity=0.056 Sum_probs=132.3
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccc-----cCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITA-----VDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV 100 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~-----~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~ 100 (310)
.|+++|+++|++. +.+|+++ +.+.+|. ..++++|+++|++||+++++|++|++.............++
T Consensus 171 ~d~~~l~~~l~~~------~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 243 (406)
T 4adb_A 171 NDINSASALIDDS------TCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGV 243 (406)
T ss_dssp TCHHHHHTTCSTT------EEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC
T ss_pred CcHHHHHHHhcCC------eEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCC
Confidence 4789999998643 4566666 5555554 34699999999999999999999974322221111011122
Q ss_pred CCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCH
Q 046506 101 EGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGV 180 (310)
Q Consensus 101 ~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 180 (310)
..|++++ +|++++...+|+++.+ ++.. +.+.. ..... ++ ..-.....++.++++.+..
T Consensus 244 -~~d~~t~--sK~~~~G~r~G~~~~~-~~~~-~~~~~---~~~~~-------------~~-~~~~~~~~a~~~~l~~~~~ 301 (406)
T 4adb_A 244 -TPDLLTT--AKALGGGFPVGALLAT-EECA-RVMTV---GTHGT-------------TY-GGNPLASAVAGKVLELINT 301 (406)
T ss_dssp -CCSEEEE--CGGGGTTSCCEEEEEC-HHHH-HTCCT---TSSCC-------------SS-TTCHHHHHHHHHHHHHHSS
T ss_pred -CCCEEEe--chhhcCCCCeEEEEEc-HHHH-hhhcc---CCcCC-------------CC-CCCHHHHHHHHHHHHHHHh
Confidence 3677754 9999844458887664 4333 22211 00000 00 0001122333344443322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCC-CeEEec--CCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHH
Q 046506 181 ANLRHFLRSHVNMAKLFERLVGSDK-RFEVVF--PRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESI 257 (310)
Q Consensus 181 ~~~~~~~~~~~~~a~~l~~~L~~~~-~~~v~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (310)
++..++..++++++.+.|+++. .+.+.. .....++.+.+.... .....++.+.+
T Consensus 302 ---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~--------------------~~~~~~~~~~l 358 (406)
T 4adb_A 302 ---PEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADY--------------------AGQAKQISQEA 358 (406)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECTTT--------------------TTCHHHHHHHH
T ss_pred ---cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEEeCCc--------------------HHHHHHHHHHH
Confidence 5677777788888888887641 111111 113456666665420 00124677778
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
.++|. .+.+ .+.+.+|++++ ..++++|+++++++|++++.++.+
T Consensus 359 ~~~gi-~v~~---~~~~~iRi~~~-~~~~~e~i~~~~~~l~~~l~~~~~ 402 (406)
T 4adb_A 359 AKAGV-MVLI---AGGNVVRFAPA-LNVSEEEVTTGLDRFAAACEHFVS 402 (406)
T ss_dssp HHTTE-ECEE---SSTTEEEECCC-TTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHCCc-EEee---cCCCeEEEECC-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 78874 4433 24678999855 679999999999999999987754
No 197
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.53 E-value=2.8e-13 Score=126.27 Aligned_cols=220 Identities=9% Similarity=-0.024 Sum_probs=133.0
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccC----ChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVD----TLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~----pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++|+++|... .+.+|+++...+++|.+. ++++|+++|++||+++++|++|.+.........-...++ .
T Consensus 211 d~~~le~~l~~~-----~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~-~ 284 (439)
T 2oat_A 211 DLPALERALQDP-----NVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENV-R 284 (439)
T ss_dssp CHHHHHHHTTST-----TEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-C
T ss_pred CHHHHHHHhCCC-----CEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCC-C
Confidence 789999999521 145666666667789766 799999999999999999999954322121111001122 3
Q ss_pred CCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
.|++ +.+|++++. ...|+++++++ .. +.+.. .. .. .++ ++-+..+.++.++++.+..
T Consensus 285 ~Di~--t~sK~l~~G~~~~G~v~~~~~-~~-~~l~~--~~---~~-----------~t~-~~~~~~~aaa~aal~~~~~- 342 (439)
T 2oat_A 285 PDIV--LLGKALSGGLYPVSAVLCDDD-IM-LTIKP--GE---HG-----------STY-GGNPLGCRVAIAALEVLEE- 342 (439)
T ss_dssp CSEE--EECGGGGTTSSCCEEEEECHH-HH-TTSCT--TS---SC-----------CSS-TTCHHHHHHHHHHHHHHHH-
T ss_pred CcEE--EecccccCCCCCeEEEEECHH-HH-hccCC--CC---cc-----------cCC-CcCHHHHHHHHHHHHHHhh-
Confidence 6876 567998864 34888877643 33 22211 00 00 011 1111222333444544422
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCeEEec--CCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSDKRFEVVF--PRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA 259 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 259 (310)
++..++..++.+++++.|+++ ++.++. ++..+++.+.+.... . ....++.+.|.+
T Consensus 343 --~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~g~~~~v~l~~~~---------------~-----~~~~~l~~~l~~ 399 (439)
T 2oat_A 343 --ENLAENADKLGIILRNELMKL-PSDVVTAVRGKGLLNAIVIKETK---------------D-----WDAWKVCLRLRD 399 (439)
T ss_dssp --TTHHHHHHHHHHHHHHHHTTS-CTTTEEEEEEETTEEEEEECCCS---------------S-----CCHHHHHHHHHH
T ss_pred --hhHHHHHHHHHHHHHHHHHHh-cCCCcEEEEeeeeEEEEEEecCc---------------c-----HHHHHHHHHHHH
Confidence 356788888999999999876 332211 234456667665420 0 001356777777
Q ss_pred cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 260 SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 260 ~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
+|. .+.+ .+..++|++++ ..+|++|+++++++|++.+.
T Consensus 400 ~Gv-~v~~---~~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~ 437 (439)
T 2oat_A 400 NGL-LAKP---THGDIIRFAPP-LVIKEDELRESIEIINKTIL 437 (439)
T ss_dssp TTE-ECCB---SSSSEEEECCC-TTCCHHHHHHHHHHHHHHHH
T ss_pred CCe-EEec---CCCCEEEEECc-cCCCHHHHHHHHHHHHHHHH
Confidence 764 4433 24578999955 57899999999999998765
No 198
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.53 E-value=1.6e-12 Score=121.41 Aligned_cols=232 Identities=9% Similarity=0.007 Sum_probs=128.9
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEecc-CCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIG-TTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~-~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
+++||++|++... ..+.++++... .| +|.+.| +++|+++|++||+++++|.+|.+.............++ .
T Consensus 201 ~~~le~~l~~~~~--~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~-~ 276 (452)
T 3n5m_A 201 VKEVDRVMTWELS--ETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDV-K 276 (452)
T ss_dssp HHHHHHHHHHHCG--GGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-C
T ss_pred HHHHHHHHHhcCC--CCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCC-C
Confidence 8999999973111 12456677666 68 998887 99999999999999999999875433221111001122 2
Q ss_pred CCeeeeecccccccc-cceEEEEEeCchhHHhhhcc---CCccccccccccccccCCCCceeccCCCcchHHHH---HHH
Q 046506 103 ADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLST---NPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLW---FVL 175 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~---~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l 175 (310)
.|++++ .|.+++. ...|+++.+++ .. +.+.. ...++.. .+.....++.. +++
T Consensus 277 ~di~t~--sK~l~~G~~~ig~~~~~~~-i~-~~~~~~~~~~~~~~~-----------------~t~~~~~~~~aaa~aal 335 (452)
T 3n5m_A 277 PDIITM--AKGITSAYLPLSATAVKRE-IY-EAFKGKGEYEFFRHI-----------------NTFGGNPAACALALKNL 335 (452)
T ss_dssp CSEEEE--CGGGGTTSSCCEEEEEEHH-HH-GGGCSSSTTCSCCCC-----------------CSSTTCHHHHHHHHHHH
T ss_pred CCEEee--cccccCCCcceEEEEECHH-HH-HHHhhccCCCCcccc-----------------CCCCCCHHHHHHHHHHH
Confidence 677665 5888765 56788776543 33 33321 0111100 00111233333 344
Q ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHHc----CCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHH
Q 046506 176 RNYGVANLRHFLRSHVNMAKLFERLVG----SDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNR 251 (310)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~a~~l~~~L~----~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (310)
+.+.. ++..++..++.+++++.|. ++|.+..+ .+...++.+.+...... ..+.+ .....
T Consensus 336 ~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~---------~~~~~----~~~~~ 398 (452)
T 3n5m_A 336 EIIEN---ENLIERSAQMGSLLLEQLKEEIGEHPLVGDI-RGKGLLVGIELVNDKET---------KEPID----NDKIA 398 (452)
T ss_dssp HHHHH---TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEE-EESSSCEEEEEEEETTT---------TEECC----HHHHH
T ss_pred HHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EEEEEEEEEEEecCCcc---------cCCCC----HHHHH
Confidence 43322 3445555555556655554 44555443 23344455554321000 00000 11224
Q ss_pred HHHHHHHhcCcEEEEEe--EECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 252 ELLESINASGKAYMTHA--VLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 252 ~l~~~l~~~g~~~~~~~--~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
++.+.+.++|.+..... .....+++||+++ ...|+++++.++++|++++.
T Consensus 399 ~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~ 450 (452)
T 3n5m_A 399 SVVNACKEKGLIIGRNGMTTAGYNNILTLAPP-LVISSEEIAFVIGTLKTAME 450 (452)
T ss_dssp HHHHHHHHTTEECEECTTSSTTCCCEEEECCC-TTCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCcEEeecCcccCCCCCEEEEECC-CCCCHHHHHHHHHHHHHHHH
Confidence 57777888885443321 0112579999955 57899999999999998764
No 199
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.53 E-value=6.8e-13 Score=124.76 Aligned_cols=236 Identities=10% Similarity=-0.025 Sum_probs=136.6
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCC
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGA 103 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 103 (310)
+++|+++|++... ..+.+|++....++.|.+.| +++|+++|++||++|++|.+|.++........-...++ ..
T Consensus 209 ~~~le~~i~~~~~--~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v-~p 285 (472)
T 3hmu_A 209 ARELEEAILELGE--NRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGI-RP 285 (472)
T ss_dssp HHHHHHHHHHHCG--GGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTC-CC
T ss_pred HHHHHHHHHhcCC--CCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCC-CC
Confidence 7889999975311 12457777777788898888 99999999999999999999976533321111001222 37
Q ss_pred Ceeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 104 DSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 104 D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
|+++++ |++++. ...|+++.+++ .. +.+.. ..+.... ++ ++-+..+.+..++++.+..
T Consensus 286 di~t~s--K~l~gg~~plG~v~~~~~-i~-~~~~~-~~~~~~~-------------t~-~~np~a~aAa~aaL~~~~~-- 344 (472)
T 3hmu_A 286 HIMTIA--KGLSSGYAPIGGSIVCDE-VA-HVIGK-DEFNHGY-------------TY-SGHPVAAAVALENLRILEE-- 344 (472)
T ss_dssp SEEEEC--GGGTTTSSCCEEEEEEHH-HH-HHHTT-SCBCCCC-------------TT-TTCHHHHHHHHHHHHHHHH--
T ss_pred ceeeec--hhhhcCCcceEEEEECHH-HH-Hhccc-CCccccC-------------CC-CCCHHHHHHHHHHHHHHHH--
Confidence 887765 998765 35677776543 33 33311 1111000 00 0001122333344443322
Q ss_pred HHHHHHHHH-HHHHHHHHHHcCC---CCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHH
Q 046506 183 LRHFLRSHV-NMAKLFERLVGSD---KRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESIN 258 (310)
Q Consensus 183 ~~~~~~~~~-~~a~~l~~~L~~~---~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 258 (310)
+++.++.. ++.+++++.|+++ |.+..+ .+...++.+.+...... ..+.+.. .......+.+.+.
T Consensus 345 -~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-r~~G~~~~i~~~~~~~~---------~~~~~~~-~~~~~~~~~~~l~ 412 (472)
T 3hmu_A 345 -ENILDHVRNVAAPYLKEKWEALTDHPLVGEA-KIVGMMASIALTPNKAS---------RAKFASE-PGTIGYICRERCF 412 (472)
T ss_dssp -TTHHHHHHHTHHHHHHHHHHGGGGSTTEEEE-EEETTEEEEEECSCGGG---------TCCBSSC-TTHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecCceEEEEEecCccc---------cccccch-hHHHHHHHHHHHH
Confidence 35566666 6777777777554 444433 23445666666542100 0000000 0112356777788
Q ss_pred hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 259 ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 259 ~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
++|.+.... + +++||+++ ...|++|+++++++|++.+.++.
T Consensus 413 ~~Gv~v~~~----g-~~iRi~p~-~~~t~e~i~~~l~~l~~~l~~~~ 453 (472)
T 3hmu_A 413 ANNLIMRHV----G-DRMIISPP-LVITPAEIDEMFVRIRKSLDEAQ 453 (472)
T ss_dssp HTTBCCEEE----T-TEEEECCC-TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HCCcEEEec----C-CEEEEECC-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 888654432 2 79999955 67999999999999998886653
No 200
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.53 E-value=1.3e-14 Score=132.81 Aligned_cols=237 Identities=11% Similarity=0.083 Sum_probs=138.1
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD 80 (310)
+..|.. ++.+|.++.+++.+|+++|++++++.. ..+.++++.+++|++|.+.+ +++|+++|++||+++++|
T Consensus 139 ~~~g~~---~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~D 212 (397)
T 3fsl_A 139 AGAGFE---VSTYPWYDEATNGVRFNDLLATLKTLQ---AGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLD 212 (397)
T ss_dssp HHTTCC---EEEECCEETTTTEECHHHHHHHHTTCC---TTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHcCCc---eEEEeeeeccCCcCcHHHHHHHHHhCC---CCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEe
Confidence 445666 899998322246899999999997421 12457777888999999855 569999999999999999
Q ss_pred cccccccccCh----hhhhhhcCCCCCCeeeeecccccccc-cceEEEEE--eCchhHHhhhccCCcccccccccccccc
Q 046506 81 AAYAGSACICP----EFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWV--KDPSDLVNSLSTNPEYLKNKATESKQVV 153 (310)
Q Consensus 81 ~a~~~~~~~~~----~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v--~~~~~~~~~~~~~~~y~~~~~~~~~~~~ 153 (310)
.+|+.+..... ...... ....-.++..|.+|.++.| ..+|++++ .++..+.+.......+.....
T Consensus 213 e~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 284 (397)
T 3fsl_A 213 IAYQGFGAGMEEDAYAIRAIA-SAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNY------- 284 (397)
T ss_dssp ESCTTSSSCTTGGGHHHHHHH-HTTCCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTT-------
T ss_pred cCchhhccCcccccHHHHHHH-hcCCCEEEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhcc-------
Confidence 99976554311 111111 1123456778999998743 34777765 333333222110000000000
Q ss_pred CCCCceeccCCCcchHHHHHHHHHhC--------HHHHHHHHHHHHHHHHHHHHHHcCCC---CeEEecCCCceEEEEEE
Q 046506 154 DYKDWQITLSRRFRSLKLWFVLRNYG--------VANLRHFLRSHVNMAKLFERLVGSDK---RFEVVFPRHFAVVCFRV 222 (310)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~~~a~~l~~~L~~~~---~~~v~~~~~~~~v~~~~ 222 (310)
.. ...+...++...+. .+.++++.++..++.+++.+.|.+++ ++.+..+ ..+.+.+ +
T Consensus 285 -------~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~-~ 352 (397)
T 3fsl_A 285 -------SS---PPNFGAQVVAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLN-QRGMFSY-T 352 (397)
T ss_dssp -------SS---CCSHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHH-CCSSEEE-C
T ss_pred -------CC---CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecC-CceEEEe-c
Confidence 00 01111122222221 34567888888999999999998764 5655433 3333322 1
Q ss_pred cCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 223 SPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
... . ..+...+.+.| +++.+. . |+|+.. .++++|+.++++|+++
T Consensus 353 -~~~--------------------~---~~~~~~l~~~g-i~v~~g----~---Ris~~~--~~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 353 -GLS--------------------A---AQVDRLREEFG-VYLIAS----G---RMCVAG--LNTANVQRVAKAFAAV 396 (397)
T ss_dssp -CCC--------------------H---HHHHHHHHTTC-EECCTT----C---EEEGGG--CCTTTHHHHHHHHHHH
T ss_pred -CCC--------------------H---HHHHHHHHhCC-EEECCC----C---eEEEEe--cCHhhHHHHHHHHHhh
Confidence 110 1 23444555565 444432 1 999763 3557799999999875
No 201
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.52 E-value=1.1e-12 Score=121.56 Aligned_cols=241 Identities=10% Similarity=-0.020 Sum_probs=129.5
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCC-cccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhc-
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTT-AITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID- 98 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~-~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~- 98 (310)
..|+++||++|++... ..+.+++++..++ ++|.+.+ +++|+++|++||+++++|.+|...............
T Consensus 173 ~~~~~~le~~l~~~~~--~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~ 250 (430)
T 3i4j_A 173 AEDAEGLRALLEREGP--ETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWS 250 (430)
T ss_dssp HHHHTHHHHHHHHHCG--GGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTT
T ss_pred hHHHHHHHHHHHhcCC--CCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhc
Confidence 3577999999975310 1245666666667 8898877 999999999999999999999754322211110011
Q ss_pred CCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHH
Q 046506 99 GVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRN 177 (310)
Q Consensus 99 ~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 177 (310)
++ ..|.+++ .|++++. ...|+++. +++..+........+.... ++ .+-+..+.++.++++.
T Consensus 251 ~~-~~di~t~--sK~l~~G~~r~G~~~~-~~~i~~~~~~~~~~~~~~~-------------t~-~~~~~~~aaa~aal~~ 312 (430)
T 3i4j_A 251 GV-TPDIAVL--GKGLAAGYAPLAGLLA-APQVYETVMGGSGAFMHGF-------------TY-AGHPVSVAAGLSVLDI 312 (430)
T ss_dssp TC-CCSEEEE--CGGGTTTSSCCEEEEE-CHHHHHHHHHTTCBCCCCC-------------TT-TTCHHHHHHHHHHHHH
T ss_pred CC-CCcEEEE--cccccCCccccEEEEE-CHHHHHHHhccCCcccccC-------------CC-CCCHHHHHHHHHHHHH
Confidence 22 2566655 5998853 33677766 4444322211110111100 00 0001122233334443
Q ss_pred hCHHHHHHHHHHHHHHHHHHHHHHc----CCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHH-HHHHHH
Q 046506 178 YGVANLRHFLRSHVNMAKLFERLVG----SDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERI-NEFNRE 252 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~a~~l~~~L~----~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 252 (310)
+.. +++.++..++.+++++.|. ++|++..+ ++..+++.+.+.+... ..... .....+
T Consensus 313 ~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~--------------~~~~~~~~~~~~ 374 (430)
T 3i4j_A 313 VER---EDLTGAAKERGAQLLAGLQALQARFPQMMQV-RGTGLLLGVVLGDLAT--------------GQAFETPGIASR 374 (430)
T ss_dssp HHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEEC--------------------------CHHH
T ss_pred HHc---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEeccccc--------------cCCCccHHHHHH
Confidence 322 3344555555555555554 45666554 3345566666643110 00000 011246
Q ss_pred HHHHHHhcCcEEEEEe-E--ECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 253 LLESINASGKAYMTHA-V--LGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 253 l~~~l~~~g~~~~~~~-~--~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+.+.+.++|.+..... . ..+...+|++++ ...++++++.++++|+++++++
T Consensus 375 ~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 375 IGAAALKRGLITYPGSGAEPNGRGDHLLLGPP-LSITAAEVDGLLALLAGALEDV 428 (430)
T ss_dssp HHHHHHHTTEECC-----------CEEEECCC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEecccccCCCCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 7777888885443321 1 123578999955 5689999999999999988765
No 202
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.52 E-value=3.7e-13 Score=124.92 Aligned_cols=236 Identities=11% Similarity=0.010 Sum_probs=133.3
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++|+++|++... .+.++++...++++|.+.| +++|.++|++||++|++|++|.++ .......-...++ .
T Consensus 188 d~~~le~~l~~~~~---~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~-~ 262 (434)
T 3l44_A 188 NVETLKEALDKWGH---EVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGGAQDLLGV-T 262 (434)
T ss_dssp CHHHHHHHHHHHGG---GEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTC-C
T ss_pred cHHHHHHHHHhCCC---CEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccHHHHHcCC-C
Confidence 89999999986421 2456777777777898888 999999999999999999999754 2221110001122 2
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhcc-CCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLST-NPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
.|++++ .|.++++...|+++. +++.+ +.+.. .+.+..... .+-+..+.+..++++.+..
T Consensus 263 ~di~t~--sK~~~~G~~iG~~~~-~~~i~-~~~~~~~~~~~~~t~---------------~~~~~a~aaa~aal~~~~~- 322 (434)
T 3l44_A 263 PDLTAL--GKVIGGGLPIGAYGG-KKEIM-EQVAPLGPAYQAGTM---------------AGNPASMASGIACLEVLQQ- 322 (434)
T ss_dssp CSEEEE--EGGGGTTSSCEEEEE-CHHHH-TTBTTTSSBCCCCTT---------------TTCHHHHHHHHHHHHHHTS-
T ss_pred CCeeeh--hhhhcCCcCeeeEEE-cHHHH-HhhccCCCcccCCCC---------------CcCHHHHHHHHHHHHHHHc-
Confidence 676655 599987777888855 44343 22211 001111000 0001122333344443322
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC----CCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGS----DKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESI 257 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~----~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (310)
+++.++..++.+++++.|.+ .+.+... ++..+++.+.+......+.-. .. .+ + .....++.+.|
T Consensus 323 --~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~-~~---~~-~----~~~~~~~~~~l 390 (434)
T 3l44_A 323 --EGLYEKLDELGATLEKGILEQAAKHNIDITL-NRLKGALTVYFTTNTIEDYDA-AQ---DT-D----GEMFGKFFKLM 390 (434)
T ss_dssp --TTHHHHHHHHHHHHHHHHHHHHHHTTCCEEE-EEETTEEEEEESSSCCCSHHH-HH---HS-C----HHHHHHHHHHH
T ss_pred --ccHHHHHHHHHHHHHHHHHHHHHhCCCCEEE-EeeccEEEEEEecCcccchhh-cc---cc-C----HHHHHHHHHHH
Confidence 34556666666666666654 3322222 234556667664321100000 00 00 0 12234677778
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
.++|. .+.+. +...+|++ ..+|++|+++++++|++++.++.+
T Consensus 391 ~~~Gv-~v~~~---~~~~~rl~---~~~t~e~i~~~l~~l~~~l~~~~~ 432 (434)
T 3l44_A 391 LQEGV-NLAPS---KYEAWFLT---TEHTKEDIEYTIEAVGRAFAALAD 432 (434)
T ss_dssp HHTTE-ECCSS---TTCCEECC---TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCe-EEeec---CCCcEEEe---cccCHHHHHHHHHHHHHHHHHHHh
Confidence 78874 33322 23467875 357999999999999999987754
No 203
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.52 E-value=1.1e-12 Score=119.91 Aligned_cols=247 Identities=9% Similarity=0.033 Sum_probs=150.4
Q ss_pred EEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhh
Q 046506 15 AIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFR 94 (310)
Q Consensus 15 ~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~ 94 (310)
..++|+. ++.||.|.+++...+.+ |.+|++-. + ..-...|+++++++|++.|+.|++|.||-+|.+....+.
T Consensus 180 ~Y~vd~~-t~~IDyd~~~~~A~~~k-----PklIi~G~-S-aY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~p 251 (490)
T 3ou5_A 180 PYKLNPK-TGLIDYNQLALTARLFR-----PRLIIAGT-S-AYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIP 251 (490)
T ss_dssp CBCEETT-TTEECHHHHHHHHHHHC-----CSEEEECC-S-SCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSC
T ss_pred ccccCCC-CCcccHHHHHHHHhhcC-----CCeEEECC-c-cCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccC
Confidence 3455653 46899999999998863 76665533 2 334457899999999999999999999987766554433
Q ss_pred hhhcCCCCCCeeeeecccccccccceEEEEEeCchh-HHhhhccCCccccccccccccccCC-CCceeccCCCcch-HHH
Q 046506 95 HFIDGVEGADSFSLNAHKWFFTTLDCCCLWVKDPSD-LVNSLSTNPEYLKNKATESKQVVDY-KDWQITLSRRFRS-LKL 171 (310)
Q Consensus 95 ~~~~~~~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~-~~~~~~~~~~y~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~ 171 (310)
.. +.++|+++.+.||+|.+|.| |+++.++... ..........|-... -++. ..-.+|++-.... ++.
T Consensus 252 sP---~~~ADvVTtTTHKTLrGPrG-G~Il~~~~~~~~~~k~~~~~~~~~~k------kin~aVFPg~qggp~~h~IAAk 321 (490)
T 3ou5_A 252 SP---FKHADIVTTTTHKTLRGARS-GLIFYRKGVKAVDPKTGREIPYTFED------RINFAVFPSLQGGPHNHAIAAV 321 (490)
T ss_dssp CG---GGTCSEEEEESSSTTCSCSC-EEEEEECSEEEECC--CCEEECCCHH------HHHHHHTTTTCSSCCHHHHHHH
T ss_pred Cc---cccceEEeccccccccCCCc-eEEEeccccccccccccchhHHHHHH------HHHhhcCccccccchHHHHHHH
Confidence 22 23699999999999999974 5666665310 000000000000000 0000 0002234433333 333
Q ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecC-CCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHH
Q 046506 172 WFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFP-RHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFN 250 (310)
Q Consensus 172 ~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (310)
+.++.......+.+..++..++|+.|.+.|.+. |+++++. .+..++.+.+.+..+. .
T Consensus 322 AVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~-G~~vvsGgTdnHlvLvDl~~~g~t------------------G--- 379 (490)
T 3ou5_A 322 AVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHLVLVDLRPKGLD------------------G--- 379 (490)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGTCC------------------H---
T ss_pred HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCCCceEEEEeccccCCC------------------H---
Confidence 334444345677889999999999999999986 9999863 5677787877664321 1
Q ss_pred HHHHHHHHhcCcEEEEEe-EE-----CCEeEEEEEcc---CCCCCHHHHHHHHHHHHHHHH
Q 046506 251 RELLESINASGKAYMTHA-VL-----GGIYAIRFAAG---ATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 251 ~~l~~~l~~~g~~~~~~~-~~-----~~~~~iRis~~---~~~~t~edi~~li~~l~~~~~ 302 (310)
.+..+.|.+.|+ .+.-. .+ .....||+... .....++|++.+-+-|.+.+.
T Consensus 380 ~~ae~~Le~agI-tvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 380 ARAERVLELVSI-TANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp HHHHHHHHHTTE-ECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCc-EECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 233444545553 33321 11 12457999733 234667888888887776553
No 204
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.51 E-value=4.1e-13 Score=125.79 Aligned_cols=238 Identities=8% Similarity=-0.030 Sum_probs=140.6
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEec-cCCcccccCC----hHHHHHHHHHhCcEEEeeccccccc
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATI-GTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSA 87 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~-~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~ 87 (310)
+..+|....+....|+++|+++|++... .+.+|++.. .++++|.+.| +++|+++|++||++|++|+++.+..
T Consensus 205 ~~~~~~p~~~~~~~d~~~le~~l~~~~~---~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g 281 (457)
T 3tfu_A 205 QVFAPQVPRDYDPAYSAAFEAQLAQHAG---ELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFG 281 (457)
T ss_dssp CEEECCCCSSCCHHHHHHHHHHHHHHGG---GEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTT
T ss_pred ceEecCCCcccCHHHHHHHHHHHHhCCC---CEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCc
Confidence 4444543322223688999999985321 245677776 6788898876 9999999999999999999987543
Q ss_pred ccChhhhhhhcCCCCCCeeeeeccccccccc-ceEEEEEeCchhHHhhhcc-CCc-cccccccccccccCCCCceeccCC
Q 046506 88 CICPEFRHFIDGVEGADSFSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLST-NPE-YLKNKATESKQVVDYKDWQITLSR 164 (310)
Q Consensus 88 ~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~-~~~-y~~~~~~~~~~~~~~~~~~~~~~~ 164 (310)
.......-...++ ..|++++ .|.+++.+ ..|+++.+++ .. +.+.. .+. +.... ++ ++-
T Consensus 282 r~G~~~a~~~~~~-~pdiit~--sK~l~gG~~~lG~v~~~~~-i~-~~~~~~~~~~~~~~~-------------t~-~~n 342 (457)
T 3tfu_A 282 RTGALFAADHAGV-SPDIMCV--GKALTGGYLSLAATLCTAD-VA-HTISAGAAGALMHGP-------------TF-MAN 342 (457)
T ss_dssp TTSSSSTHHHHTC-CCSEEEE--CGGGGTTSSCCEEEEEEHH-HH-HHHHHSSSCSCCCCC-------------TT-TTC
T ss_pred cccchhHhHhcCC-CceEEEE--ChhhhCCCcceEEEEEcHH-HH-HHhhccCCCceeEec-------------CC-CcC
Confidence 2221111001122 3677744 69888753 5787776644 33 33211 111 11000 00 010
Q ss_pred CcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCC---CCeEEecCCCceEEEEEEcCCcchhhhhhhhccccch
Q 046506 165 RFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSD---KRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLS 241 (310)
Q Consensus 165 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~---~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
+..+.+..++++.+.. +.+.++..++.+++++.|.++ |++..+ .....++.+.+....
T Consensus 343 ~~a~aaa~aaL~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-r~~G~~~~i~l~~~~--------------- 403 (457)
T 3tfu_A 343 PLACAVSVASVELLLG---QDWRTRITELAAGLTAGLDTARALPAVTDV-RVCGAIGVIECDRPV--------------- 403 (457)
T ss_dssp HHHHHHHHHHHHHHHT---SCHHHHHHHHHHHHHHHHGGGGGSTTEEEE-EECSSCEEEEESSCC---------------
T ss_pred HHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHhcCCCeeee-ecCCeEEEEEECCcc---------------
Confidence 1122233334443322 355677777888888888764 455433 224556666665421
Q ss_pred hHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 242 EEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 242 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+ ..++.+.+.++|. .+.+. ...+|++++ ...|++|+++++++|++++.++
T Consensus 404 ~-------~~~~~~~l~~~Gv-~v~~~----~~~lRi~p~-~~~t~eei~~~l~~L~~~l~~~ 453 (457)
T 3tfu_A 404 D-------LAVATPAALDRGV-WLRPF----RNLVYAMPP-YICTPAEITQITSAMVEVARLV 453 (457)
T ss_dssp C-------HHHHHHHHHHTTE-ECCCB----TTEEEECCC-TTCCHHHHHHHHHHHHHHHHHC
T ss_pred c-------HHHHHHHHHHCCe-EEEec----CCEEEEECC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 0 1356777878874 43332 358999855 5689999999999999988765
No 205
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.51 E-value=1.6e-13 Score=122.93 Aligned_cols=220 Identities=10% Similarity=0.015 Sum_probs=139.5
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+..|.. ++.+|.++ .+.+|+++| + .+.+|++.+++|++|.+.|.+++.++++..| ++++|++|
T Consensus 114 ~~~g~~---~~~v~~~~--~~~~d~~~l-----~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~ 176 (335)
T 1uu1_A 114 KAVGAK---FLEVPLTK--DLRIPEVNV-----G------EGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAY 176 (335)
T ss_dssp HHHTCE---EEECCCCT--TSCCCCCCC-----C------TTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTT
T ss_pred HHcCCe---EEEeccCC--CCCCCHHHc-----C------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcc
Confidence 345665 88888875 357888877 1 1457777888999999999999999999999 99999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceecc
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITL 162 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 162 (310)
+.+... +.. .... ....+++..|++|+++.| ..+|++++ +++...........| .
T Consensus 177 ~~~~~~-~~~-~~~~-~~~~~i~~~s~sK~~g~~G~r~G~~~~-~~~~~~~l~~~~~~~----~---------------- 232 (335)
T 1uu1_A 177 YEFHGE-SYV-DFLK-KYENLAVIRTFSKAFSLAAQRVGYVVA-SEKFIDAYNRVRLPF----N---------------- 232 (335)
T ss_dssp HHHHCC-CCG-GGGG-TCSSEEEEEESTTTTTCGGGCCEEEEE-CHHHHHHHHHHSCTT----C----------------
T ss_pred hhhcch-hHH-HHhh-hCCCEEEEecchhhcCCcccCeEEEEe-CHHHHHHHHHhcCCC----C----------------
Confidence 754321 101 1111 123578889999998744 23788887 444433221111111 0
Q ss_pred CCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchh
Q 046506 163 SRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSE 242 (310)
Q Consensus 163 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 242 (310)
.-......+.++++. .+.++++.++..++.+++.+.|+++ ++++. ++..+++.+.+...
T Consensus 233 ~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~----------------- 291 (335)
T 1uu1_A 233 VSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREM-GYRIT-DSRGNFVFVFMEKE----------------- 291 (335)
T ss_dssp SCHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCCSSEEEEECCTH-----------------
T ss_pred cCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-CcEEc-CCCCeEEEEECCCC-----------------
Confidence 000112222333332 3467888888999999999999876 66654 44556666554320
Q ss_pred HHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 243 EERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 243 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
...++.+.|.++|. .+.+ ..+++|+|+. +++|+++++++|+++
T Consensus 292 ------~~~~~~~~l~~~gi-~v~~----~~~~iRis~~----~~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 292 ------EKERLLEHLRTKNV-AVRS----FREGVRITIG----KREENDMILRELEVF 334 (335)
T ss_dssp ------HHHHHHHHHHHHTE-EEEE----ETTEEEEECC----CHHHHHHHHHHHHCC
T ss_pred ------CHHHHHHHHHHCCE-EEEE----CCCeEEEEeC----CHHHHHHHHHHHHhh
Confidence 01356677777764 4444 2458999953 367899999998753
No 206
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.51 E-value=2.9e-14 Score=131.92 Aligned_cols=242 Identities=14% Similarity=0.100 Sum_probs=140.7
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
++..|.. ++.+|..+.+++.+|+++|+++|++.. ..+.++++..++|++|.+.+ +++|+++|++||+++++
T Consensus 160 ~~~~g~~---~~~v~~~~~~~~~~d~~~l~~~l~~~~---~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 233 (420)
T 4f4e_A 160 FDMAGFE---VVAYPYYDAKTNGVNFDGMLAALNGYE---PGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFL 233 (420)
T ss_dssp HHHTTCC---EEEEECEETTTTEECHHHHHHHHTTCC---TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHcCCe---EEEeeeeccccCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Confidence 3456776 999998322246899999999997421 12457888899999999855 66899999999999999
Q ss_pred ecccccccccCh----hhhhhhcCCCCCCeeeeecccccccc-cceEEEEE-e-CchhHHhhhccCCccccccccccccc
Q 046506 80 DAAYAGSACICP----EFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWV-K-DPSDLVNSLSTNPEYLKNKATESKQV 152 (310)
Q Consensus 80 D~a~~~~~~~~~----~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v-~-~~~~~~~~~~~~~~y~~~~~~~~~~~ 152 (310)
|.+++......+ ..... .+...-++++.|++|.++.| ..+|++++ . ++..+.+.............
T Consensus 234 De~y~~~~~~~~~~~~~~~~~-~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 306 (420)
T 4f4e_A 234 DIAYQGFGESIEADAAAVRLF-AAANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNY------ 306 (420)
T ss_dssp EESCTTSSSCTTGGGHHHHHH-HHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTT------
T ss_pred ccccccccCCcchhhHHHHHH-HhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhccc------
Confidence 999976554321 11111 11223567889999998743 34787764 2 33332221100000000000
Q ss_pred cCCCCceeccCCCcchHHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHHHcCC---CCeEEecCCCceEEEEEEcC
Q 046506 153 VDYKDWQITLSRRFRSLKLWFVLRNYG-----VANLRHFLRSHVNMAKLFERLVGSD---KRFEVVFPRHFAVVCFRVSP 224 (310)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~a~~l~~~L~~~---~~~~v~~~~~~~~v~~~~~~ 224 (310)
.+.-...+..+...+.... .+.++++.++..++.+++.+.|+++ +++.+..+ ..+.+.| ..
T Consensus 307 --------~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~g~~~~--~~ 375 (420)
T 4f4e_A 307 --------SNPPTHGGAIVAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINA-QRGMFSY--SG 375 (420)
T ss_dssp --------SSCCSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHH-SCSSEEE--CC
T ss_pred --------CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECC-CccEEEE--eC
Confidence 0000011122222222111 3446778888899999999999876 35655433 3333333 11
Q ss_pred CcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 225 SAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
.. . +.+...+.+.| +++.+. .|+|+.. .++++|+.++++|++++
T Consensus 376 ~~--------------------~---~~~~~~l~~~g-I~v~~~-------~Ris~~~--~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 376 LT--------------------S---AQVDRLREEFG-IYAVST-------GRICVAA--LNTRNLDVVANAIAAVL 419 (420)
T ss_dssp CC--------------------H---HHHHHHHHHHC-EECCTT-------SEEEGGG--CCTTTHHHHHHHHHHHH
T ss_pred CC--------------------H---HHHHHHHHhCC-EEecCC-------CeEEEec--CCHHHHHHHHHHHHHHh
Confidence 11 1 23444455566 444332 2999763 45667999999998764
No 207
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.51 E-value=1.6e-13 Score=127.27 Aligned_cols=231 Identities=13% Similarity=0.060 Sum_probs=140.9
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEeecccccccc
Q 046506 12 NFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVDAAYAGSAC 88 (310)
Q Consensus 12 ~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD~a~~~~~~ 88 (310)
.++++|.++.+....+++. .+ .+.++++.+++|++|.+.+ +++|+++|++||+++++|++|+.+..
T Consensus 177 ~~~~~~~~~~~~~~~~l~~-----~~------~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~ 245 (432)
T 3ei9_A 177 NIEYMRCTPENGFFPDLST-----VG------RTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMS 245 (432)
T ss_dssp TCEEEECCGGGTTSCCGGG-----CC------CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCC
T ss_pred ceEEeccCcccCCcCChhh-----CC------CCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhcc
Confidence 4888888764333444332 01 2446777788999999876 66777789999999999999986543
Q ss_pred cChhhhhh--hcCCCCCCeeeeeccccccc-ccceEEEEEeCchh------HHhhhccCCccccccccccccccCCCCce
Q 046506 89 ICPEFRHF--IDGVEGADSFSLNAHKWFFT-TLDCCCLWVKDPSD------LVNSLSTNPEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 89 ~~~~~~~~--~~~~~~~D~~~~~~hK~l~~-p~g~g~l~v~~~~~------~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 159 (310)
.... ... ..+....++++.|++|+++. ...+|+++++++.. +...+.....+...
T Consensus 246 ~~~~-~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 309 (432)
T 3ei9_A 246 DDNP-RSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFN--------------- 309 (432)
T ss_dssp SSCC-SSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCC---------------
T ss_pred CCCC-CChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhccccC---------------
Confidence 2111 110 11112356888999999973 34578877665431 01111000000000
Q ss_pred eccCCCcchHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhc
Q 046506 160 ITLSRRFRSLKLWFVLRNYG---VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYE 236 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~ 236 (310)
....+...++...+. .+.++++.++..++.+++.+.|.++ ++++..+....++.+.+.+.+
T Consensus 310 -----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~---------- 373 (432)
T 3ei9_A 310 -----GASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYDVYGGKNAPYVWVHFPNQS---------- 373 (432)
T ss_dssp -----CSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEECSSSSEEEEECTTSC----------
T ss_pred -----CCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC-CceecCCCcceEEEEECCCCC----------
Confidence 012233333333332 3467888899999999999999987 888775556667777665321
Q ss_pred cccchhHHHHHHHHHHHHHHHHhcCcEEEEEeE-E--CCEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 237 NSLLSEEERINEFNRELLESINASGKAYMTHAV-L--GGIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 237 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~--~~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
..++...+.++..+++.+.. . .+.+++|+|+ .+++++++.+++.|++.-
T Consensus 374 -------------~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~---~~~~e~l~~~l~rl~~~~ 425 (432)
T 3ei9_A 374 -------------SWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSA---FGHRENILEACRRFKQLY 425 (432)
T ss_dssp -------------HHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEEC---CSCHHHHHHHHHHHHHHH
T ss_pred -------------HHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEe---cCCHHHHHHHHHHHHHHh
Confidence 12455555554234444422 1 2467999995 358999999999988754
No 208
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.50 E-value=2e-14 Score=131.59 Aligned_cols=239 Identities=12% Similarity=0.071 Sum_probs=137.6
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD 80 (310)
+..|.. ++.+|.++.+++.+|+++|+++|++.. ....++++.+++|++|.+.| +++|+++|++||+++++|
T Consensus 135 ~~~g~~---~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~D 208 (394)
T 2ay1_A 135 NFMGLP---VQTYRYFDAETRGVDFEGMKADLAAAK---KGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLID 208 (394)
T ss_dssp HHHTCC---EEEEECEETTTTEECHHHHHHHHHTCC---TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHcCCc---eEEEecccccCCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 345666 889998532245899999999997531 11356777889999999876 557899999999999999
Q ss_pred cccccccccC--h--hhhhhhcCCCCCC-eeeeecccccccc-cceEEEEE--eCchhHHhhhccCCccccccccccccc
Q 046506 81 AAYAGSACIC--P--EFRHFIDGVEGAD-SFSLNAHKWFFTT-LDCCCLWV--KDPSDLVNSLSTNPEYLKNKATESKQV 152 (310)
Q Consensus 81 ~a~~~~~~~~--~--~~~~~~~~~~~~D-~~~~~~hK~l~~p-~g~g~l~v--~~~~~~~~~~~~~~~y~~~~~~~~~~~ 152 (310)
++|+.+.... + ..... ... +.+ ++..|+||+++.| ..+|++++ .+++.+..............
T Consensus 209 e~~~~~~~~~~~~~~~~~~~-~~~-~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~------- 279 (394)
T 2ay1_A 209 LAYQGFGDGLEEDAAGTRLI-ASR-IPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQT------- 279 (394)
T ss_dssp ECCTTSSSCHHHHHHHHHHH-HHH-CSSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTT-------
T ss_pred cCccccccCcccchHHHHHH-hhc-CCCEEEEEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhh-------
Confidence 9997654321 0 01111 111 123 5577899998743 33688887 34432211110000000000
Q ss_pred cCCCCceeccCCCcchHHHHHHHHHh-----CHHHHHHHHHHHHHHHHHHHHHHcCCC---CeEEecCCCceEEEEEEcC
Q 046506 153 VDYKDWQITLSRRFRSLKLWFVLRNY-----GVANLRHFLRSHVNMAKLFERLVGSDK---RFEVVFPRHFAVVCFRVSP 224 (310)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~a~~l~~~L~~~~---~~~v~~~~~~~~v~~~~~~ 224 (310)
..+.-......+..+++.. -.+.++++.++..++.+++.+.|+++. ++++..+.....+.+.+ +
T Consensus 280 -------~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~-~ 351 (394)
T 2ay1_A 280 -------YSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGA-T 351 (394)
T ss_dssp -------TSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCC-C
T ss_pred -------cCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceEEEeeCC-C
Confidence 0000011122222233211 024577788888888999999887652 35544332233332211 1
Q ss_pred CcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 225 SAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
. ..+...+.+.|. .+.+ .+|+|+. .++++++++++++|+++
T Consensus 352 ----------------------~---~~~~~~l~~~gi-~v~~-------~~Ris~~--~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 352 ----------------------P---EQVKRIKEEFGI-YMVG-------DSRINIA--GLNDNTIPILARAIIEV 392 (394)
T ss_dssp ----------------------H---HHHHHHHHHHCE-ECCT-------TCEEEGG--GCCTTTHHHHHHHHHHH
T ss_pred ----------------------H---HHHHHHHHhCCE-EecC-------CCeEEee--cCCHhhHHHHHHHHHHc
Confidence 1 234444555664 4432 2599966 47899999999999875
No 209
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.50 E-value=1.5e-13 Score=126.46 Aligned_cols=236 Identities=14% Similarity=0.140 Sum_probs=138.6
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEeeccccccccc
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVDAAYAGSACI 89 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD~a~~~~~~~ 89 (310)
++.+|.++.+.+.+|+++|+++|++.. ....++++.+++|++|.+.| +++|+++|++||+++++|+++......
T Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~ 231 (412)
T 1ajs_A 155 IRSYRYWDTEKRGLDLQGFLSDLENAP---EFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASG 231 (412)
T ss_dssp EEEEECEETTTTEECHHHHHHHHHHSC---TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTS
T ss_pred eEEEeeecCCCCccCHHHHHHHHHhCC---CCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCC
Confidence 778887432246899999999997631 12456777889999999865 568999999999999999998655432
Q ss_pred C---h--hhhhhhcCCCCCCeeeeecccccccccc--eEEEEEe--CchhHHhhhccCCccccccccccccccCCCCcee
Q 046506 90 C---P--EFRHFIDGVEGADSFSLNAHKWFFTTLD--CCCLWVK--DPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQI 160 (310)
Q Consensus 90 ~---~--~~~~~~~~~~~~D~~~~~~hK~l~~p~g--~g~l~v~--~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 160 (310)
. . ...... ....-+++..++||.++. .| +|++++. +++.+.........+.... .
T Consensus 232 ~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~-~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~ 295 (412)
T 1ajs_A 232 NLEKDAWAIRYFV-SEGFELFCAQSFSKNFGL-YNERVGNLTVVAKEPDSILRVLSQMQKIVRVT--------------W 295 (412)
T ss_dssp CHHHHTHHHHHHH-HTTCCEEEEEECTTTSCC-GGGCEEEEEEECSSHHHHHHHHHHHHHHHHTT--------------T
T ss_pred cccccchHHHHHh-ccCCcEEEEEecccccCC-CCcceEEEEEecCCHHHHHHHHHHHHHHHhcc--------------c
Confidence 2 1 111111 111123778999998875 35 7888872 4432211110000000000 0
Q ss_pred ccCCCcchHHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHHHcCCC---CeEEecCCCceEEEEEEcCCcchhhhh
Q 046506 161 TLSRRFRSLKLWFVLRNYG-----VANLRHFLRSHVNMAKLFERLVGSDK---RFEVVFPRHFAVVCFRVSPSAVMDKLK 232 (310)
Q Consensus 161 ~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~a~~l~~~L~~~~---~~~v~~~~~~~~v~~~~~~~~~~~~~~ 232 (310)
.+.-......+.++++... .+.++++.++..++.+++.+.|++++ ++++.. +..+++.|. ...
T Consensus 296 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~--~~~------ 366 (412)
T 1ajs_A 296 SNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHIT-DQIGMFSFT--GLN------ 366 (412)
T ss_dssp SSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHH-HCCSSEEEC--CCC------
T ss_pred CCCChHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEc-CCCceEEEe--CCC------
Confidence 0000112222333333221 23667888889999999999998864 365543 333333331 110
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 233 TKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
...+...+.+.| +.+.+ .+|+|++. ++++++++++++|++++++
T Consensus 367 -----------------~~~~~~~l~~~g-v~v~~-------~~Ris~~~--~~~~~i~~~~~~l~~~l~~ 410 (412)
T 1ajs_A 367 -----------------PKQVEYLINQKH-IYLLP-------SGRINMCG--LTTKNLDYVATSIHEAVTK 410 (412)
T ss_dssp -----------------HHHHHHHHHTTC-EECCT-------TSEEEGGG--CCTTTHHHHHHHHHHHHHH
T ss_pred -----------------HHHHHHHHHhCC-EEecC-------CcEEEeee--CCHHHHHHHHHHHHHHHHh
Confidence 023333344555 44433 26999662 5889999999999988765
No 210
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.50 E-value=3.5e-14 Score=130.83 Aligned_cols=237 Identities=10% Similarity=0.064 Sum_probs=139.4
Q ss_pred eecCCCCCCEEEEec-CCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEe
Q 046506 4 QIVGIDVKNFRAIKT-TKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~-~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~v 79 (310)
+..|.. ++.+|. +++ ++.+|+++|+++|++... ...++++.+++|++|.+.| +++|+++|++||+++++
T Consensus 142 ~~~g~~---~~~v~~~~~~-~~~~d~~~l~~~l~~~~~---~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~ 214 (412)
T 1yaa_A 142 ENQGLK---TATYPYWANE-TKSLDLNGFLNAIQKAPE---GSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALF 214 (412)
T ss_dssp HTTTCC---EEEEECEETT-TTEECHHHHHHHHHHSCT---TCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHcCce---EEEEeeecCC-CCccCHHHHHHHHHhCCC---CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 445665 899998 543 357999999999976311 1345555899999999866 66789999999999999
Q ss_pred ecccccccccC---h--hhhhhhcCCCC---CCeeeeecccccccccc--eEEEE-Ee-----Cch----hHHhhhccCC
Q 046506 80 DAAYAGSACIC---P--EFRHFIDGVEG---ADSFSLNAHKWFFTTLD--CCCLW-VK-----DPS----DLVNSLSTNP 139 (310)
Q Consensus 80 D~a~~~~~~~~---~--~~~~~~~~~~~---~D~~~~~~hK~l~~p~g--~g~l~-v~-----~~~----~~~~~~~~~~ 139 (310)
|++|+...... + ...... .... -+++..|++|+++ |.| +|+++ +. ++. .+ +.+..
T Consensus 215 De~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~s~sK~~~-~~GlriG~~~~~~~~~~~~~~~~~~l~-~~l~~-- 289 (412)
T 1yaa_A 215 DTAYQGFATGDLDKDAYAVRLGV-EKLSTVSPVFVCQSFAKNAG-MYGERVGCFHLALTKQAQNKTIKPAVT-SQLAK-- 289 (412)
T ss_dssp EESCTTTSSSCHHHHTHHHHHHH-HHTTTTCCEEEEEECTTTSC-CGGGCEEEEEEECCSCTTHHHHHHHHH-HHHHH--
T ss_pred ecccccccCCcccchhHHHHHHH-hcCCCCcceEEEeccCCCCC-CcCCcceEEEEEecCCCCCHHHHHHHH-HHHHH--
Confidence 99996543321 1 111111 1111 2466789999986 445 68776 23 343 22 21110
Q ss_pred ccccccccccccccCCCCceeccCCCcchHHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHHHcCCC---CeEEec
Q 046506 140 EYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYG-----VANLRHFLRSHVNMAKLFERLVGSDK---RFEVVF 211 (310)
Q Consensus 140 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~a~~l~~~L~~~~---~~~v~~ 211 (310)
...... ...-......+..+++... .+.++++.++..++.+++.+.|++++ ++++..
T Consensus 290 -~~~~~~--------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 354 (412)
T 1yaa_A 290 -IIRSEV--------------SNPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIV 354 (412)
T ss_dssp -HHHTTT--------------SSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHH
T ss_pred -HHhhcc--------------CCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeec
Confidence 000000 0000011122223333211 23677888888899999999998763 365543
Q ss_pred CCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHH
Q 046506 212 PRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVM 291 (310)
Q Consensus 212 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~ 291 (310)
+..+++.|. +.+ . ..+...+.+.| +.+.+ .+|+|+.. .++++++
T Consensus 355 -~~~~~~~~~--~~~--------------------~---~~~~~~l~~~g-i~v~~-------~~Ris~~~--~~~~~i~ 398 (412)
T 1yaa_A 355 -NQCGMFSFT--GLT--------------------P---QMVKRLEETHA-VYLVA-------SGRASIAG--LNQGNVE 398 (412)
T ss_dssp -HCCSSEEEC--CCC--------------------H---HHHHHHHHHHC-EECCT-------TSEEEGGG--CCTTTHH
T ss_pred -cCceEEEee--CCC--------------------H---HHHHHHHHhCC-EEecc-------CcEEEEcc--CCHhHHH
Confidence 344444331 211 1 23433333455 44433 47999763 5899999
Q ss_pred HHHHHHHHHHHH
Q 046506 292 VAWTVVQEHLEA 303 (310)
Q Consensus 292 ~li~~l~~~~~~ 303 (310)
+++++|+++++.
T Consensus 399 ~~~~~l~~~~~~ 410 (412)
T 1yaa_A 399 YVAKAIDEVVRF 410 (412)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999988764
No 211
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.49 E-value=8.9e-14 Score=128.06 Aligned_cols=237 Identities=16% Similarity=0.151 Sum_probs=136.0
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCCh---HHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTL---KPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl---~~I~~l~~~~g~~l~vD 80 (310)
+..|.. ++.+|.++.+++.+|+++|++++++... .+.++++..++|++|.+.+. ++|+++|++||+++++|
T Consensus 149 ~~~g~~---~~~~~~~~~~~~~~d~~~l~~~l~~~~~---~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D 222 (409)
T 4eu1_A 149 AKAGME---LTPYSYYDPATKGLNLAGMLECLDKAPE---GSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVD 222 (409)
T ss_dssp HHTTCE---EEEECCEETTTTEECHHHHHHHHHHSCT---TCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHcCCe---EEEEEeecCcCCcCcHHHHHHHHHhCCC---CcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEe
Confidence 445665 8889884333568999999999975311 24566667889999999884 55999999999999999
Q ss_pred cccccccccCh-----hhhhhhcCCCCCCeeeeecccccccc-cceEEE--EEeCchhHHhhhccCCccccccccccccc
Q 046506 81 AAYAGSACICP-----EFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCL--WVKDPSDLVNSLSTNPEYLKNKATESKQV 152 (310)
Q Consensus 81 ~a~~~~~~~~~-----~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l--~v~~~~~~~~~~~~~~~y~~~~~~~~~~~ 152 (310)
.+|+....... ...... +...-.+++.|.+|.++.| ..+|++ ++.++............+.....
T Consensus 223 e~y~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~------ 295 (409)
T 4eu1_A 223 MAYQGFATGQLDYDAFVPRHLV-DMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMY------ 295 (409)
T ss_dssp ESCTTTTTSCHHHHTHHHHHHH-TTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHH------
T ss_pred ccccccccCCcccchHHHHHHH-hhCCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhc------
Confidence 99876554321 011111 1111234567889998754 346776 55665421111000000000000
Q ss_pred cCCCCceeccCCCcchHHHHHHHHHhC--------HHHHHHHHHHHHHHHHHHHHHHcCCC--C-eEEecCCCceEEEEE
Q 046506 153 VDYKDWQITLSRRFRSLKLWFVLRNYG--------VANLRHFLRSHVNMAKLFERLVGSDK--R-FEVVFPRHFAVVCFR 221 (310)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~~~a~~l~~~L~~~~--~-~~v~~~~~~~~v~~~ 221 (310)
.+ ...+..+++...+. .+.++++.++..++.+++.+.|+++. + +++. ++..+++.|
T Consensus 296 ---------~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~~~~~~- 362 (409)
T 4eu1_A 296 ---------NN--PPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHI-ERQVGMMAY- 362 (409)
T ss_dssp ---------SS--CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHH-HHSCSSEEE-
T ss_pred ---------CC--CChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccee-cCCceEEEE-
Confidence 00 01222222222221 23466778888899999999998762 1 4443 334444444
Q ss_pred EcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 222 VSPSAVMDKLKTKYENSLLSEEERINEFNRELLESIN-ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
.+.. .++...+. +.| +++.+. .|++++. .++++|++++++|+++
T Consensus 363 -~~~~------------------------~~~~~~ll~~~g-v~v~p~-------~Ri~~~~--~~~~~i~~~~~~l~~~ 407 (409)
T 4eu1_A 363 -TGLT------------------------REQVELLRSEYH-IYMTLN-------GRAAVSG--LNSTNVEYVSQAIHNV 407 (409)
T ss_dssp -CCCC------------------------HHHHHHHHHHHC-EECCTT-------CEEEGGG--CCTTTHHHHHHHHHHH
T ss_pred -eCCC------------------------HHHHHHHHHcCC-EEEcCC-------CEEEEEe--cCHhhHHHHHHHHHHH
Confidence 1211 12234444 345 444432 3888763 4556799999999876
Q ss_pred H
Q 046506 301 L 301 (310)
Q Consensus 301 ~ 301 (310)
+
T Consensus 408 l 408 (409)
T 4eu1_A 408 T 408 (409)
T ss_dssp H
T ss_pred h
Confidence 4
No 212
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.49 E-value=2.2e-12 Score=120.75 Aligned_cols=236 Identities=11% Similarity=0.022 Sum_probs=131.4
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCC
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGA 103 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~ 103 (310)
+++||++|.+... ..+.++++...+++.|.+.| +++|+++|++||+++++|.+|.+.............++ ..
T Consensus 205 ~~~le~~i~~~~~--~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~-~p 281 (459)
T 4a6r_A 205 ARWLEEKILEIGA--DKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGF-QP 281 (459)
T ss_dssp HHHHHHHHHHHCG--GGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CC
T ss_pred HHHHHHHHHHcCC--CCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CC
Confidence 7899999975311 12456777777777888887 99999999999999999999975433221111001122 36
Q ss_pred Ceeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 104 DSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 104 D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
|+++++ |++++. ...|+++.+ ++.. +.+.....+.... ++ ++-+..+.++.++++.+..
T Consensus 282 di~t~s--K~l~gg~~~lg~v~~~-~~i~-~~~~~~~~~~~~~-------------t~-~~~~~~~aaa~aal~~~~~-- 341 (459)
T 4a6r_A 282 DLFTAA--KGLSSGYLPIGAVFVG-KRVA-EGLIAGGDFNHGF-------------TY-SGHPVCAAVAHANVAALRD-- 341 (459)
T ss_dssp SEEEEC--GGGGTTSSCCEEEEEC-HHHH-HHHHHHCTTHHHH-------------HH-CSCHHHHHHHHHHHHHHHH--
T ss_pred Ceeehh--hhhcCCCCCccceeeC-HHHH-HHhhcCCCcccCC-------------CC-CCCHHHHHHHHHHHHHHhc--
Confidence 777664 988765 466777664 4333 2221000000000 00 0001122333344443322
Q ss_pred HHHHHHHHH-HHHHHHH----HHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHH
Q 046506 183 LRHFLRSHV-NMAKLFE----RLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESI 257 (310)
Q Consensus 183 ~~~~~~~~~-~~a~~l~----~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (310)
+.+.++.. ++.++++ +.|.+.+.+..+ .+...++.+.+...... + .+... -......+.+.+
T Consensus 342 -~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~---~------~~~~~--~~~~~~~~~~~l 408 (459)
T 4a6r_A 342 -EGIVQRVKDDIGPYMQKRWRETFSRFEHVDDV-RGVGMVQAFTLVKNKAK---R------ELFPD--FGEIGTLCRDIF 408 (459)
T ss_dssp -TCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEE-EEETTEEEEEECSBTTT---T------BCCSS--TTHHHHHHHHHH
T ss_pred -chHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EEEEEEEEEEEecCccc---c------ccccc--hHHHHHHHHHHH
Confidence 23344444 4444444 444555655544 23445666666532100 0 00000 012235677778
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
.++|.+.. +. + +++||+++ ...|+++++.++++|++.+.++.
T Consensus 409 ~~~Gv~v~-~~---g-~~iRi~~~-~~~t~e~i~~~l~~l~~~l~~~~ 450 (459)
T 4a6r_A 409 FRNNLIMR-AC---G-DHIVSAPP-LVMTRAEVDEMLAVAERCLEEFE 450 (459)
T ss_dssp HHTTEECE-EE---T-TEEEECCC-TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCeEEe-cC---C-CEEEEECC-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 88875443 32 2 78999955 67899999999999999887664
No 213
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.48 E-value=4.9e-12 Score=117.98 Aligned_cols=237 Identities=9% Similarity=0.034 Sum_probs=130.7
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccC-CcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGT-TAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~-~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
|+++||++|..... .+.+|++.... ++.|.+.| +++|+++|++||++|++|.+|++.......+.....++
T Consensus 196 d~~~le~~l~~~~~---~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~- 271 (448)
T 3dod_A 196 CLRELAQLLEEHHE---EIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENV- 271 (448)
T ss_dssp HHHHHHHHHHHHGG---GEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-
T ss_pred HHHHHHHHHHhCCC---CEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCC-
Confidence 58999999973211 24466666666 77887766 99999999999999999999975432222111111122
Q ss_pred CCCeeeeeccccccccc-ceEEEEEeCchhHHhhhccC----CccccccccccccccCCCCceeccCCCcchHHHHHHHH
Q 046506 102 GADSFSLNAHKWFFTTL-DCCCLWVKDPSDLVNSLSTN----PEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLR 176 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~-g~g~l~v~~~~~~~~~~~~~----~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 176 (310)
..|++++ .|.+++.+ ..|+++.+++ .. +.+... ..+.... ++ .+-+..+.++.++++
T Consensus 272 ~~di~t~--sK~l~~G~~~ig~v~~~~~-~~-~~~~~~~~~~~~~~~~~-------------t~-~~~~~~~aaa~aal~ 333 (448)
T 3dod_A 272 QPDLMAA--GKGITGGYLPIAVTFATED-IY-KAFYDDYENLKTFFHGH-------------SY-TGNQLGCAVALENLA 333 (448)
T ss_dssp CCSEEEE--CGGGGTTSSCCEEEEEEHH-HH-HTTCSCGGGCCCCCCCC-------------TT-TTCHHHHHHHHHHHH
T ss_pred CCCEEEe--cccccCCcCceEEEEECHH-HH-HHhhhccccCCcccccC-------------CC-CcCHHHHHHHHHHHH
Confidence 2677665 49998653 6787776543 33 332210 0000000 00 000112223333444
Q ss_pred HhCHHHHHHHHHHHHHHHHHHHHHHc---CCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHH
Q 046506 177 NYGVANLRHFLRSHVNMAKLFERLVG---SDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNREL 253 (310)
Q Consensus 177 ~~~~~~~~~~~~~~~~~a~~l~~~L~---~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 253 (310)
.+.. +++.++..++.+++++.|. ..|.+... .+...++.+.+...... ..+.+. . .....++
T Consensus 334 ~~~~---~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~-~~~g~~~~~~~~~~~~~---------~~~~~~-~-~~~~~~~ 398 (448)
T 3dod_A 334 LFES---ENIVEQVAEKSKKLHFLLQDLHALPHVGDI-RQLGFMCGAELVRSKET---------KEPYPA-D-RRIGYKV 398 (448)
T ss_dssp HHHH---TTHHHHHHHHHHHHHHHHHHHTTSTTEEEE-EEETTEEEEEECSBTTT---------TBCCCG-G-GCHHHHH
T ss_pred HHhc---ccHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EeeeEEEEEEEccCccc---------ccccch-h-hHHHHHH
Confidence 3322 3445555555555555554 44444332 22344566666542100 000000 0 0012456
Q ss_pred HHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 254 LESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 254 ~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
.+.+.++|.+. .+. + +.+|++++ ...|+++++.++++|++.+.++.+
T Consensus 399 ~~~l~~~Gv~~-~~~---~-~~iRi~~~-~~~t~e~i~~~l~~l~~~l~~~~~ 445 (448)
T 3dod_A 399 SLKMRELGMLT-RPL---G-DVIAFLPP-LASTAEELSEMVAIMKQAIHEVTS 445 (448)
T ss_dssp HHHHHHTTEEC-CEE---T-TEEEECCC-TTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHCCcEE-ecc---C-CEEEEECC-CCCCHHHHHHHHHHHHHHHHHHhc
Confidence 77787887543 332 2 68999854 678999999999999999987643
No 214
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.48 E-value=1.9e-12 Score=121.07 Aligned_cols=218 Identities=10% Similarity=-0.012 Sum_probs=121.3
Q ss_pred cEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCCeeeeecccccccccce
Q 046506 45 PLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFTTLDC 120 (310)
Q Consensus 45 ~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p~g~ 120 (310)
+.+|++...+++.|.+.| +++|+++|++||+++++|.+|.+.............++ ..|++++ .|++++....
T Consensus 226 ~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~-~pdi~t~--sK~~~~G~~~ 302 (453)
T 4ffc_A 226 LAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGI-VPDIVTM--AKGIAGGMPL 302 (453)
T ss_dssp EEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEE--CGGGGTTSSC
T ss_pred EEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCC-CcchHhh--hhhhcCCcCe
Confidence 456666666677788877 99999999999999999999975432221111001122 3577665 4999876667
Q ss_pred EEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Q 046506 121 CCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERL 200 (310)
Q Consensus 121 g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~ 200 (310)
|+++.+ ++.+ +.+.. ..... ++ ++-+....+..++++.+.. +++.++..++.+++++.
T Consensus 303 G~~~~~-~~i~-~~~~~--~~~~~--------------t~-~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~ 360 (453)
T 4ffc_A 303 SAVTGR-AELM-DAVYA--GGLGG--------------TY-GGNPVTCAAAVAALGVMRE---LDLPARARAIEASVTSR 360 (453)
T ss_dssp EEEEEE-HHHH-TTSCT--TSSCC--------------SS-SSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHH
T ss_pred EEEEEC-HHHH-hhhcc--cCcCC--------------CC-CcCHHHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHH
Confidence 887664 3333 22210 00000 00 0101122233334433322 24455555555555555
Q ss_pred Hc----CCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEE
Q 046506 201 VG----SDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAI 276 (310)
Q Consensus 201 L~----~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~i 276 (310)
|. +.|.+..+ .....++.+.+..... ..+ + .....++.+.+.++|.+..... .....+
T Consensus 361 l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~----------~~~-~----~~~~~~~~~~l~~~Gv~v~~~~--~~~~~i 422 (453)
T 4ffc_A 361 LSALAEEVDIIGEV-RGRGAMLAIEIVKPGT----------LEP-D----AALTKSIAAEALSQGVLILTCG--TFGNVI 422 (453)
T ss_dssp HHHHHHHCSSEEEE-EEETTEEEEEEBCTTS----------CCB-C----HHHHHHHHHHHHHTTEECCEEC--TTSCEE
T ss_pred HHHHHhhCCCeEEE-EeeceEEEEEEecCcc----------cCC-C----HHHHHHHHHHHHhCCCEEecCC--CCCCEE
Confidence 54 44555443 2234566666643100 000 0 2233567777888885443321 123689
Q ss_pred EEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 277 RFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 277 Ris~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
|++++ ...++++++.++++|++++.++.+
T Consensus 423 Ri~~~-~~~t~e~i~~~l~~l~~~l~~~~~ 451 (453)
T 4ffc_A 423 RLLPP-LVIGDDLLDEGITALSDIIRAKAS 451 (453)
T ss_dssp EECCC-TTCCHHHHHHHHHHHHHHHHHHC-
T ss_pred EEECC-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99955 568999999999999999887643
No 215
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.48 E-value=4.8e-13 Score=124.07 Aligned_cols=230 Identities=12% Similarity=0.071 Sum_probs=132.1
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++|+++|++... .+.++++...+++.|.+.| +++|+++|++||+++++|++|.+. ...........++ .
T Consensus 186 d~~~le~~l~~~~~---~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~-~ 260 (429)
T 3k28_A 186 DLESVKYAFEQFGD---DIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGV-T 260 (429)
T ss_dssp CHHHHHHHHHHHGG---GEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTC-C
T ss_pred CHHHHHHHHHhCCC---CEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchHHHHhCC-C
Confidence 89999999986422 2456777777778899888 999999999999999999999654 2221111001122 3
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhcc-CCccccccccccccccCCCCceeccCCCcchHHH---HHHHHHh
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLST-NPEYLKNKATESKQVVDYKDWQITLSRRFRSLKL---WFVLRNY 178 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~ 178 (310)
.|.+++ .|.++++..+|+++.+ ++.+ +.+.. ...+... +.....++. .++++..
T Consensus 261 ~di~t~--sK~~~~G~~iG~~~~~-~~~~-~~~~~~~~~~~~~------------------t~~~~~~a~aaa~aal~~~ 318 (429)
T 3k28_A 261 PDLTCL--GKVIGGGLPVGAYGGK-AEIM-RQVAPSGPIYQAG------------------TLSGNPLAMAAGYETLVQL 318 (429)
T ss_dssp CSEEEE--CGGGGTTSCCEEEEEC-HHHH-TTBTTTSSBCCCC------------------TTTTCHHHHHHHHHHHHTC
T ss_pred Cceehh--hhhhcCCCCeEEEEEc-HHHH-hhhccCCCccccC------------------CCCCChHHHHHHHHHHHHH
Confidence 676654 5999876678887664 4333 22211 1001110 011122333 3344433
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHcCC----CCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHH
Q 046506 179 GVANLRHFLRSHVNMAKLFERLVGSD----KRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELL 254 (310)
Q Consensus 179 ~~~~~~~~~~~~~~~a~~l~~~L~~~----~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 254 (310)
. ++..++..++.+++++.|.++ +.+..+ ++..+++.+.+.......... . ..+ + .....++.
T Consensus 319 ~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~-~---~~~-~----~~~~~~~~ 384 (429)
T 3k28_A 319 T----PESYVEFERKAEMLEAGLRKAAEKHGIPHHI-NRAGSMIGIFFTDEPVINYDA-A---KSS-N----LQFFAAYY 384 (429)
T ss_dssp C----HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEE-EEETTEEEEESSSSCCCSHHH-H---TTS-C----HHHHHHHH
T ss_pred H----HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEE-EeeccEEEEEEecCCcccccc-c---ccc-c----HHHHHHHH
Confidence 2 566777777777777777653 332222 233455666554321000000 0 000 0 12235677
Q ss_pred HHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 255 ESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 255 ~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+.+.++|. .+.+. +.+.+|++ ..+|++|+++++++|++++.++
T Consensus 385 ~~l~~~Gv-~v~~~---~~~~~r~~---~~~t~e~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 385 REMVEQGV-FLPPS---QFEGLFLS---TVHSDADIEATIAAAEIAMSKL 427 (429)
T ss_dssp HHHHHTTE-ECCSS---TTSCBCCC---TTCCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCe-EEecC---CCCCEEEE---CCCCHHHHHHHHHHHHHHHHHH
Confidence 77878874 33322 34567875 3578999999999999987654
No 216
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.48 E-value=5.2e-13 Score=124.07 Aligned_cols=177 Identities=15% Similarity=0.060 Sum_probs=116.5
Q ss_pred ecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEec----cCCcccccCChHHHHHHHHH--hCcEEE
Q 046506 5 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATI----GTTAITAVDTLKPLCDVAKQ--FGIWVH 78 (310)
Q Consensus 5 ~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~----~~~~~G~~~pl~~I~~l~~~--~g~~l~ 78 (310)
..|+. ++.+|.+++ +.+|+++|+++|++. +.+|+++. +++.+|.+.|+++|+++|++ +|++++
T Consensus 137 ~~G~~---~~~v~~~~~--~~~d~e~l~~~l~~~------tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~li 205 (431)
T 3ht4_A 137 EYNIG---YNAVPLTEG--GLVDFEAVAAAIHSN------TKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVF 205 (431)
T ss_dssp GGTCE---EEECCBCTT--SSBCHHHHHHHCCTT------EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEE
T ss_pred HcCCE---EEEeCCCCC--CCcCHHHHHhhcCCC------CeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEE
Confidence 35666 889998864 589999999999754 45777776 66778889999999999999 999999
Q ss_pred eecccccccccChhhhhhhcCCCCCCeeeeeccccccc---ccceEEEEEeCchhHHhhhc--cCCcccccccccccccc
Q 046506 79 VDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFT---TLDCCCLWVKDPSDLVNSLS--TNPEYLKNKATESKQVV 153 (310)
Q Consensus 79 vD~a~~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~---p~g~g~l~v~~~~~~~~~~~--~~~~y~~~~~~~~~~~~ 153 (310)
||++|+.+....... .. ++|+++.|+||++++ |.| |+++.+ ++.++.... ..+.+...
T Consensus 206 vDea~~~~~~~~~~~-----~~-g~Di~~~S~sK~lgg~~~~~G-G~v~~~-~~li~~l~~~~~~~~~g~~--------- 268 (431)
T 3ht4_A 206 VDNCYGEFIEEQEPC-----HV-GADLMAGSLIKNPGGGIVKTG-GYIVGK-EQYVEACAYRLTSPGIGAE--------- 268 (431)
T ss_dssp EECTTCTTSSSCCGG-----GT-TCSEEEEETTSGGGTTTCSSC-EEEEEC-HHHHHHHHHHHSCTTTTTS---------
T ss_pred EeCCChhhccCCCcc-----cc-CCeEEEcCccccCCCCCCCce-EEEEec-HHHHHHHHHHhccCCcccc---------
Confidence 999998776432211 11 489999999999876 556 666654 444333211 11111000
Q ss_pred CCCCceeccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCce-----EEEEEEc
Q 046506 154 DYKDWQITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFA-----VVCFRVS 223 (310)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~-----~v~~~~~ 223 (310)
.+-.+.. .+.+++ +......++++..++++++++.|+++ ++++... ... ++++.+.
T Consensus 269 --------~~~~~~~--~~~~~~--~l~~~~~~~~~~~~~a~~l~~~L~~~-g~~v~p~-~~~~~~~li~~i~l~ 329 (431)
T 3ht4_A 269 --------AGASLYS--LQEMYQ--GFFLAPHVAGQALKGAIFTAAFLEKL-GMNTSPA-WNAPRTDLIQSVQFD 329 (431)
T ss_dssp --------CSCCCSC--SHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH-TCCEESC-TTSCCSSSCCEEECC
T ss_pred --------cCccHHH--HHHHHh--HhhhHHHHHHHHHHHHHHHHHHHHhC-cCEecCC-CCCCCccEEEEEEeC
Confidence 0100111 111222 23445678888999999999999887 5666422 222 5666664
No 217
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.48 E-value=5.9e-14 Score=128.95 Aligned_cols=232 Identities=12% Similarity=0.033 Sum_probs=132.9
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEeeccccccccc
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVDAAYAGSACI 89 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD~a~~~~~~~ 89 (310)
++.+|.++++.+..+++ +. + .+.+|++++++|++|.+.| +++|+++|+++|+++++|++|+.....
T Consensus 143 ~~~~~~~~~~~~~~~l~---~~--~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~ 211 (400)
T 3asa_A 143 IIALPCLQENAFFPEFP---ED--T------HIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISD 211 (400)
T ss_dssp EEEEECCGGGTTCCCCC---TT--C------CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCC
T ss_pred eEecccchhcCcccChh---hc--c------CccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcC
Confidence 78888875433334432 21 1 2446777788999999987 667899999999999999999754321
Q ss_pred ChhhhhhhcCCC---CCCeeeeecccccccc-cceEEEEEeCchh------HHhhhccCCccccccccccccccCCCCce
Q 046506 90 CPEFRHFIDGVE---GADSFSLNAHKWFFTT-LDCCCLWVKDPSD------LVNSLSTNPEYLKNKATESKQVVDYKDWQ 159 (310)
Q Consensus 90 ~~~~~~~~~~~~---~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~------~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ 159 (310)
...... ...+. +.+++..+++|+++.| ..+|+++++++.. +.......... .
T Consensus 212 ~~~~~~-~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~ 273 (400)
T 3asa_A 212 PSLPKS-IFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFLST-----------------T 273 (400)
T ss_dssp TTSCSS-GGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHH-----------------H
T ss_pred CCCCCc-hhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhhHHHHHHHHhcc-----------------C
Confidence 110000 11111 2347789999998744 3478887654421 22211000000 0
Q ss_pred eccCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEEEEE-EcCCcchhhhhhhhccc
Q 046506 160 ITLSRRFRSLKLWFVLRNYGVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVVCFR-VSPSAVMDKLKTKYENS 238 (310)
Q Consensus 160 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v~~~-~~~~~~~~~~~~~~~~~ 238 (310)
+ .+ ...+...++...+....++++.++..++.+++.+.|++. ++++..+...+++.+. ++...
T Consensus 274 ~-~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~------------ 337 (400)
T 3asa_A 274 F-NG--ASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLAT-GFEVFGGEHAPYLWVKPTQANI------------ 337 (400)
T ss_dssp C-CC--CCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHT-TCEEEECSSSSEEEEECCCTTC------------
T ss_pred c-cC--CChHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCceEEEEeccCCCC------------
Confidence 0 00 011222222222211146677888888999999999887 8888755456667666 43210
Q ss_pred cchhHHHHHHHHHHHHHHHHhc-CcEEEEEe-EE--CCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 239 LLSEEERINEFNRELLESINAS-GKAYMTHA-VL--GGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 239 ~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~-~~--~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+ ..++.+.+.++ |. .+.+. .. .+.+++|+| . .+++++++.++++|++++..
T Consensus 338 ---~-------~~~~~~~l~~~~gv-~v~~g~~f~~~~~~~iRis-~--~~~~e~i~~~l~~l~~~~~~ 392 (400)
T 3asa_A 338 ---S-------DRDLFDFFLREYHI-AITPGIGFGRSGSGFVRFS-S--LGKREDILAACERLQMAPAL 392 (400)
T ss_dssp ---C-------TTTHHHHHHHHHSE-ECEEGGGGCGGGTTCEEEE-C--CSCHHHHHHHHHHHHC----
T ss_pred ---C-------HHHHHHHHHHhCCE-EEeChhHhCCCCCCEEEEE-e--eCCHHHHHHHHHHHHHHHHh
Confidence 0 02355555544 54 44432 11 134689999 3 47899999999999887654
No 218
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.46 E-value=1.3e-13 Score=126.41 Aligned_cols=237 Identities=14% Similarity=0.113 Sum_probs=136.0
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD 80 (310)
+..|.. ++.+|.++.+.+.+|++++++.+.+.+ ..+.++++..++|++|.+.+ +++|+++|++||+++++|
T Consensus 141 ~~~g~~---~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~D 214 (401)
T 7aat_A 141 RDAGLQ---LQAYRYYDPKTCSLDFTGAMEDISKIP---EKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFD 214 (401)
T ss_dssp HHTTCE---EEEEECEETTTTEECHHHHHHHHTTSC---TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHcCCe---eEeeeeeccccCccCHHHHHHHHHhCC---CCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEc
Confidence 445665 889998643346899999999886521 12567888899999997655 788999999999999999
Q ss_pred cccccccccChh-----hhhhhcCCCCCCeeeeecccccccc-cceEEEEEe--CchhHHhhhccCCccccccccccccc
Q 046506 81 AAYAGSACICPE-----FRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVK--DPSDLVNSLSTNPEYLKNKATESKQV 152 (310)
Q Consensus 81 ~a~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~--~~~~~~~~~~~~~~y~~~~~~~~~~~ 152 (310)
.++......... ..... ....-.+++.|+||.++.| ..+|++++. ++............+.....
T Consensus 215 eay~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~------ 287 (401)
T 7aat_A 215 MAYQGFASGDINRDAWALRHFI-EQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMY------ 287 (401)
T ss_dssp ESCTTTTTSCHHHHTHHHHHHH-HTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHH------
T ss_pred cccccccCCCccccHHHHHHHH-hcCCcEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhcc------
Confidence 998655442210 11111 1123456789999998754 227887752 33211111000000000000
Q ss_pred cCCCCceeccCCCcchHHHHHHHHHhC--------HHHHHHHHHHHHHHHHHHHHHHcCC---CCeEEecCCCceEEEEE
Q 046506 153 VDYKDWQITLSRRFRSLKLWFVLRNYG--------VANLRHFLRSHVNMAKLFERLVGSD---KRFEVVFPRHFAVVCFR 221 (310)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~~~a~~l~~~L~~~---~~~~v~~~~~~~~v~~~ 221 (310)
. .........+...+. .+.+++..++..++.+++.+.|.++ +++.+. ++..+.+.|.
T Consensus 288 ---------~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~ 355 (401)
T 7aat_A 288 ---------S--NPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHI-TDQIGMFCFT 355 (401)
T ss_dssp ---------S--SCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHH-HHCCSSEEEC
T ss_pred ---------C--CCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcee-cCCcceEEec
Confidence 0 001122222221221 2346677788888999999999876 234433 3344444332
Q ss_pred EcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHH-HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 222 VSPSAVMDKLKTKYENSLLSEEERINEFNRELLESI-NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
+.. . +.+ ..+ .+.| +++.+ .+|+|++. .+++ +|++++++|+++
T Consensus 356 --~~~--------------------~---~~~-~~ll~~~g-i~v~~-------~~Ris~~~-~~~~-~i~~~~~~l~~~ 399 (401)
T 7aat_A 356 --GLK--------------------P---EQV-ERLTKEFS-IYMTK-------DGRISVAG-VASS-NVGYLAHAIHQV 399 (401)
T ss_dssp --CCC--------------------H---HHH-HHHHHHHC-EECCT-------TCEEEGGG-CCTT-THHHHHHHHHHH
T ss_pred --CCC--------------------H---HHH-HHHHHhCC-EeccC-------CCeEEecc-CChh-hHHHHHHHHHHH
Confidence 211 1 123 333 3445 44432 26999764 4544 599999999886
Q ss_pred H
Q 046506 301 L 301 (310)
Q Consensus 301 ~ 301 (310)
+
T Consensus 400 ~ 400 (401)
T 7aat_A 400 T 400 (401)
T ss_dssp H
T ss_pred h
Confidence 4
No 219
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.46 E-value=3.2e-13 Score=126.13 Aligned_cols=237 Identities=15% Similarity=0.134 Sum_probs=137.9
Q ss_pred ecCCCCCCEEEEec-CCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEee
Q 046506 5 IVGIDVKNFRAIKT-TKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 5 ~~g~~~~~v~~v~~-~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD 80 (310)
..|.. ++.+|. ++++++.+|+++|+++|++... ...++++..++|++|.+.+ +++|+++|++||+++++|
T Consensus 168 ~~G~~---v~~~~~~~~~~~~~~d~e~l~~~l~~~~~---~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~D 241 (448)
T 3meb_A 168 KLKVP---YKEYTYLRKDGELEIDFSNTKKDIQSAPE---KSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFD 241 (448)
T ss_dssp TTTSC---CEEECCBCTTSCSSBCHHHHHHHHHHSCT---TCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred hCCCe---EEEEeccccccCCCcCHHHHHHHHHhCCC---CcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 56666 899998 5432468999999999986311 2457777888999999877 555999999999999999
Q ss_pred cccccccccCh-----hhhhhhcCCCCCCeeeeecccccccc-cceEEE--EE--------eCchh---HHhhhccCCcc
Q 046506 81 AAYAGSACICP-----EFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCL--WV--------KDPSD---LVNSLSTNPEY 141 (310)
Q Consensus 81 ~a~~~~~~~~~-----~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l--~v--------~~~~~---~~~~~~~~~~y 141 (310)
.++........ ....... ...-.+++.|+||.++.| ..+|++ +. .++.. +...+.. .
T Consensus 242 eay~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~---~ 317 (448)
T 3meb_A 242 SAYQGFATGSFEADAFAVRMFVD-AGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTL---Q 317 (448)
T ss_dssp ESCTTTSSSCHHHHTHHHHHHHH-TTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHH---H
T ss_pred cccccccCCCcccCchhHHHHhh-cCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHH---H
Confidence 99875543321 0111111 111235679999998744 236776 44 33311 1111100 0
Q ss_pred ccccccccccccCCCCceeccCCCcchHHHHHHHHHhCH--------HHHHHHHHHHHHHHHHHHHHHcCC--CC-----
Q 046506 142 LKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGV--------ANLRHFLRSHVNMAKLFERLVGSD--KR----- 206 (310)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--------~~~~~~~~~~~~~a~~l~~~L~~~--~~----- 206 (310)
.... .+ ....+..+++...+.. +.++++.++..++.+++.+.|.++ ++
T Consensus 318 ~~~~----------------~~-~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~ 380 (448)
T 3meb_A 318 IRKT----------------WS-MSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKG 380 (448)
T ss_dssp HHTT----------------TS-SCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTC
T ss_pred Hhcc----------------cC-CccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCccc
Confidence 0000 00 0112222333333222 336777888889999999999876 44
Q ss_pred -eEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHH-hcCcEEEEEeEECCEeEEEEEccCCC
Q 046506 207 -FEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESIN-ASGKAYMTHAVLGGIYAIRFAAGATL 284 (310)
Q Consensus 207 -~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~iRis~~~~~ 284 (310)
+... .+..+.+.| .+.. .++...+. +.| +++.+.. .|+|+..
T Consensus 381 ~~~~~-~~~~g~~~~--~~~~------------------------~~~~~~ll~~~g-V~v~~G~------gRis~a~-- 424 (448)
T 3meb_A 381 TWDHI-LTAIGMFTF--TGLT------------------------PEHVDYLKEKWS-IYLVKAG------GRMSMCG-- 424 (448)
T ss_dssp CCTHH-HHCCSSEEE--CCCC------------------------HHHHHHHHHHHC-EEECSGG------GEEEGGG--
T ss_pred cccee-CCCceEEEe--cCCC------------------------HHHHHHHHHhCC-EEEeCCC------cEEEEec--
Confidence 3333 233333333 2211 13334443 445 4554421 2999763
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q 046506 285 TEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 285 ~t~edi~~li~~l~~~~~~~ 304 (310)
.++++|++++++|+++++++
T Consensus 425 ~~~~~i~~~~~~l~~~l~~~ 444 (448)
T 3meb_A 425 LTESNCDYVAEAIHDAVTKL 444 (448)
T ss_dssp CCTTTHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHhc
Confidence 35567999999999988743
No 220
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.46 E-value=8.5e-12 Score=116.57 Aligned_cols=231 Identities=12% Similarity=0.084 Sum_probs=127.0
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
+++.+++.|.+... ...+.+|+++..+++.|.+.| +++|+++|++||+++++|.+|.+.............++ .
T Consensus 211 ~~~~~~~~l~~~~~-~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~-~ 288 (451)
T 3oks_A 211 AAKRAITVIDKQIG-ADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGI-D 288 (451)
T ss_dssp HHHHHHHHHHHHTC-GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-C
T ss_pred HHHHHHHHHHhhcC-CCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCC-C
Confidence 35555566654211 112456777777777788877 99999999999999999999975433221111001122 3
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
.|++++ .|++++....|+++.+ ++.. +.+.. ..... ++ ++-+....+..++++.+..
T Consensus 289 pdi~t~--sK~l~~G~~iG~v~~~-~~~~-~~~~~--~~~~~--------------t~-~~~~~~~aaa~aal~~~~~-- 345 (451)
T 3oks_A 289 PDLIVT--AKGIAGGLPLSAVTGR-AEIM-DSPHV--SGLGG--------------TY-GGNPIACAAALATIETIES-- 345 (451)
T ss_dssp CSEEEE--CGGGGTTSSCEEEEEE-HHHH-TCSCT--TSBCC--------------SS-SSCHHHHHHHHHHHHHHHH--
T ss_pred CCeeee--hhhhhCCcceEEEEEC-HHHH-hhhcC--CCcCC--------------CC-CCCHHHHHHHHHHHHHHhh--
Confidence 677655 5999876667877664 3333 22210 00000 00 0101122223334433322
Q ss_pred HHHHHHHHHHHHHHHHHHHc----CCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHH
Q 046506 183 LRHFLRSHVNMAKLFERLVG----SDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESIN 258 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~----~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 258 (310)
+++.++..++.+++++.|. +.|.+..+ .....++.+.+..... ..+ + ......+.+.+.
T Consensus 346 -~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~G~~~~~~~~~~~~----------~~~-~----~~~~~~~~~~l~ 408 (451)
T 3oks_A 346 -EGLVARAQQIEKIMKDRLGRLQAEDDRIGDV-RGRGAMIAMELVKAGT----------TEP-D----ADLTKALCAGAH 408 (451)
T ss_dssp -TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEEBSTTS----------CCB-C----HHHHHHHHHHHH
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHhhCCCeEEE-EEeeEEEEEEEecCcc----------CCC-C----HHHHHHHHHHHH
Confidence 2445555556666665554 34555433 2234466666643100 000 0 223356777788
Q ss_pred hcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 259 ASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 259 ~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
++|.+..... .....+|++++ ...+++++++++++|++.+.
T Consensus 409 ~~Gv~v~~~~--~~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~ 449 (451)
T 3oks_A 409 AAGVIVLSCG--TYGNVVRFLPP-LSIGDDLLNEGLDVLEEVLR 449 (451)
T ss_dssp HTTEECEEEC--TTSCEEEECCC-TTCCHHHHHHHHHHHHHHHH
T ss_pred hCCcEEecCC--CCCCEEEEECC-CCCCHHHHHHHHHHHHHHHh
Confidence 8885444322 12368999955 56899999999999998765
No 221
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.45 E-value=2.2e-12 Score=119.73 Aligned_cols=237 Identities=10% Similarity=0.030 Sum_probs=131.8
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
.|+++|+++|++... .+.+|+++..++++|.+.| +++|.++|++||+++++|++|++. ...........++
T Consensus 188 ~d~~~le~~l~~~~~---~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~- 262 (434)
T 2epj_A 188 NDVEALERVFAEYGD---RIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLEGAQGYFNI- 262 (434)
T ss_dssp TCHHHHHHHHHHHGG---GEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTTHHHHHHTC-
T ss_pred CCHHHHHHHHHhCCC---CEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcchhhHHhCC-
Confidence 378999999976311 2456777666677899888 999999999999999999999844 2222111001122
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhhcc-CCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCH
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLST-NPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGV 180 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 180 (310)
..|++ +.+|++++....|+++.++ +.+ +.+.. ...+.... + .+-+..+.++.++++.+..
T Consensus 263 ~~di~--s~sK~l~~G~~~G~v~~~~-~~~-~~l~~~~~~~~~~t--------------~-~~~~~~~aa~~a~l~~~~~ 323 (434)
T 2epj_A 263 EGDII--VLGKIIGGGFPVGAVAGSR-EVM-SLLTPQGKVFNAGT--------------F-NAHPITMAAGLATLKALEE 323 (434)
T ss_dssp CCSEE--EEEGGGGTTSSCEEEEECH-HHH-TTBTTTSSBCCCCT--------------T-TTCHHHHHHHHHHHHHHHH
T ss_pred CCCee--eecchhcCCcceeeeeecH-HHH-HhhccCCCcccCCC--------------C-CcCHHHHHHHHHHHHHHHh
Confidence 36776 4569998744578877653 333 22211 00000000 0 0001122233344443322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCC---CeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHH
Q 046506 181 ANLRHFLRSHVNMAKLFERLVGSDK---RFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESI 257 (310)
Q Consensus 181 ~~~~~~~~~~~~~a~~l~~~L~~~~---~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (310)
+++.++..++.+++++.|+++. ++....++..+++.+.+........ ++. ..+ + .....++.+.|
T Consensus 324 ---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~-~~~---~~~-~----~~~~~~~~~~l 391 (434)
T 2epj_A 324 ---EPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQLFIGVEEVSNA-AQA---RKA-D----KKFYVKLHEEM 391 (434)
T ss_dssp ---SCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEETCSCCSSH-HHH---TTS-C----HHHHHHHHHHH
T ss_pred ---cCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeCCCcccc-hhc---ccc-C----HHHHHHHHHHH
Confidence 4566777778888888886541 2321112345567776654100000 000 000 0 11234677777
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
.++|. .+.+. +...+|++ ..++++|+++++++|++.+.++.
T Consensus 392 ~~~Gv-~v~~~---~~~~~~~~---~~~t~e~i~~~l~~l~~~l~~~~ 432 (434)
T 2epj_A 392 LRRGV-FIAPS---NLEAVFTG---LPHQGEALEIAVEGLRSSLKTVL 432 (434)
T ss_dssp HHTTE-ECCSS---TTSCEECC---TTCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCe-EEecc---CCCcEEEe---ccCCHHHHHHHHHHHHHHHHHHh
Confidence 77774 44332 12234543 46899999999999999887764
No 222
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.44 E-value=7.8e-14 Score=127.61 Aligned_cols=237 Identities=13% Similarity=0.094 Sum_probs=137.0
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEee
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVD 80 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD 80 (310)
+..|.. ++.+|.++.+++.+|+++|++++++.+ ....++++.+++|++|.+.| +++|+++|++||+++++|
T Consensus 138 ~~~g~~---~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~D 211 (396)
T 2q7w_A 138 NSAGLE---VREYAYYDAENHTLDFDALINSLNEAQ---AGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFD 211 (396)
T ss_dssp HHTTCE---EEEEECEETTTTEECHHHHHHHHTTCC---TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHcCCc---eEEEecccCCCCCcCHHHHHHHHHhCC---CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEe
Confidence 345665 888988532246899999999997531 11456777899999999876 567999999999999999
Q ss_pred cccccccccC----hhhhhhhcCCCCCCeeeeecccccccc-cceEEEEE--eCchhHHhhhccCCcccccccccccccc
Q 046506 81 AAYAGSACIC----PEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWV--KDPSDLVNSLSTNPEYLKNKATESKQVV 153 (310)
Q Consensus 81 ~a~~~~~~~~----~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v--~~~~~~~~~~~~~~~y~~~~~~~~~~~~ 153 (310)
++|+.+.... ....... ....-+++..|++|+++.| ..+|++++ .+++.+.+............
T Consensus 212 e~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 282 (396)
T 2q7w_A 212 FAYQGFARGLEEDAEGLRAFA-AMHKELIVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRAN-------- 282 (396)
T ss_dssp ESCTTSSSCHHHHTHHHHHHH-HHCSCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTT--------
T ss_pred cccccccCCccchhHHHHHHH-hcCCcEEEEEeccccccccccccceEEEEcCCHHHHHHHHHHHHHHHhhc--------
Confidence 9987654321 0111111 1112356789999998743 22688876 24422111110000000000
Q ss_pred CCCCceeccCCCcchHHHHHHHHHhC--------HHHHHHHHHHHHHHHHHHHHHHcCCC---CeEEecCCCceEEEEEE
Q 046506 154 DYKDWQITLSRRFRSLKLWFVLRNYG--------VANLRHFLRSHVNMAKLFERLVGSDK---RFEVVFPRHFAVVCFRV 222 (310)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~~~a~~l~~~L~~~~---~~~v~~~~~~~~v~~~~ 222 (310)
..+ ...+...++...+. .+.+++..++..++.+++.+.|+++. ++++. ++..+++.+ +
T Consensus 283 ------~~~---~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~-~ 351 (396)
T 2q7w_A 283 ------YSN---PPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFI-IKQNGMFSF-S 351 (396)
T ss_dssp ------TSS---CCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHH-HHCCSSEEE-C
T ss_pred ------cCC---CCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccee-cCCCceEEE-e
Confidence 000 01222223333332 24566777888889999999998763 35544 334344433 1
Q ss_pred cCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 223 SPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
.-. . ..+...+.+.|. .+.+ .+|+|+.. .++++++.++++|+++
T Consensus 352 ~~~---------------------~---~~~~~~l~~~gv-~v~~-------~~Ris~~~--~~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 352 GLT---------------------K---EQVLRLREEFGV-YAVA-------SGRVNVAG--MTPDNMAPLCEAIVAV 395 (396)
T ss_dssp CCC---------------------H---HHHHHHHHHHCE-ECCT-------TCEEEGGG--CCTTTHHHHHHHHHHH
T ss_pred cCC---------------------H---HHHHHHHHhcCe-eecC-------CceEEEee--cCHHHHHHHHHHHHhc
Confidence 111 1 234444555663 4433 26999763 4889999999999875
No 223
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.43 E-value=4.1e-12 Score=118.62 Aligned_cols=234 Identities=9% Similarity=-0.026 Sum_probs=130.4
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
.|+++|+++|++... .+.+|+++...+++|.+.| +++|+++|++||+++++|++|++. ...........++
T Consensus 186 ~d~~~le~~l~~~~~---~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~- 260 (453)
T 2cy8_A 186 DDIEGMREVFANHGS---DIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNHGMQALLDV- 260 (453)
T ss_dssp TCHHHHHHHHHHHGG---GEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTC-
T ss_pred CCHHHHHHHHHhcCC---CEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhhhHHhCC-
Confidence 489999999975311 1456666666666898877 999999999999999999999744 2221111001122
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhhcc---CCccccccccccccccCCCCceeccCCCcchHHHHHHHHH-
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLST---NPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRN- 177 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~---~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~- 177 (310)
..|++ +..|+++++..+|+++.++ +.. +.+.. ...+... ++ .+-+..+.++.++++.
T Consensus 261 ~~di~--s~sK~l~~G~~~G~v~~~~-~~~-~~l~~~~~~~~~~~~--------------t~-~~n~~~~aa~~aal~~~ 321 (453)
T 2cy8_A 261 QPDLT--CLAKASAGGLPGGILGGRE-DVM-GVLSRGSDRKVLHQG--------------TF-TGNPITAAAAIAAIDTI 321 (453)
T ss_dssp CCSEE--EEEGGGGTTSSCEEEEECH-HHH-TTSSSCC-----------------------C-CCCHHHHHHHHHHHHHH
T ss_pred CCcEE--EEChhhhCCcceEEEechH-HHH-HHhccccCCCceeCC--------------CC-CCCHHHHHHHHHHHHHH
Confidence 36766 5569998766788887764 333 22211 0000000 00 0001122333344443
Q ss_pred hCHHHHHHHHHHHHHHHHHHHHHHcCC----CCeEEecCCCceEEEEEEcC-----CcchhhhhhhhccccchhHHHHHH
Q 046506 178 YGVANLRHFLRSHVNMAKLFERLVGSD----KRFEVVFPRHFAVVCFRVSP-----SAVMDKLKTKYENSLLSEEERINE 248 (310)
Q Consensus 178 ~~~~~~~~~~~~~~~~a~~l~~~L~~~----~~~~v~~~~~~~~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 248 (310)
+ .+++.++..++.+++++.|.++ +-.... ++...++.+.+.. .......++ ...+ + ..
T Consensus 322 ~----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~---~~~~-~----~~ 388 (453)
T 2cy8_A 322 L----EDDVCAKINDLGQFAREAMNHLFARKGLNWLA-YGRFSGFHLMPGLPPNTTDTGSITRAE---VARP-D----VK 388 (453)
T ss_dssp H----HTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEE-ECCTTEEEEEETSCTTCCCCHHHHTTC---SCCC-C----HH
T ss_pred h----hhhHHHHHHHHHHHHHHHHHHHHhhCCCcEEE-EEeeeEEEEEEeccccccccccccccc---cccc-c----HH
Confidence 3 2445667777888888877653 322222 3455677777653 100000000 0000 0 11
Q ss_pred HHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 249 FNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 249 ~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
...++.+.|.++|. .+.+ . +.+|++ ...+++++++++++|++.+..+.
T Consensus 389 ~~~~l~~~l~~~Gv-~v~~----~-~~~~l~---~~~t~~~i~~~l~~l~~~l~~~~ 436 (453)
T 2cy8_A 389 MIAAMRMALILEGV-DIGG----R-GSVFLS---AQHEREHVEHLVTTFDRVLDRLA 436 (453)
T ss_dssp HHHHHHHHHHHTTE-ECBT----T-TEEECC---TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCe-EEeC----C-CCEEee---ccCCHHHHHHHHHHHHHHHHHHH
Confidence 23457777777764 4332 1 235543 56899999999999999987764
No 224
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.42 E-value=2.4e-12 Score=119.17 Aligned_cols=235 Identities=9% Similarity=-0.069 Sum_probs=127.3
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++|+++|++... .+.+|++...++++|.+.| +++|+++|++||+++++|++|++. ...........++ .
T Consensus 185 d~~~le~~l~~~~~---~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~-~ 259 (427)
T 3fq8_A 185 DLEAVKALFAENPG---EIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGGVQEKFGV-T 259 (427)
T ss_dssp CHHHHHHHHHHSTT---TEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTHHHHHTTC-C
T ss_pred CHHHHHHHHHhCCC---CEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcchhhHhcCC-C
Confidence 89999999976321 2567777777788899999 999999999999999999999744 2221111111222 3
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVAN 182 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 182 (310)
.|+++++ |++++....|+++. +++.+ +.+.....+.... ++ .+-+..+.++.++++.+..
T Consensus 260 ~di~t~s--K~~~~G~~~G~~~~-~~~~~-~~~~~~~~~~~~~-------------t~-~~~~~~~aa~~aal~~~~~-- 319 (427)
T 3fq8_A 260 PDLTTLG--KIIGGGLPVGAYGG-KREIM-QLVAPAGPMYQAG-------------TL-SGNPLAMTAGIKTLELLRQ-- 319 (427)
T ss_dssp CSEEEEC--GGGGTTSSCEEEEE-CHHHH-TTBTTTSSBCCCC-------------TT-TTCHHHHHHHHHHHHHHTS--
T ss_pred CChhhhh--hhhhCCcceEEEEE-cHHHH-HhhccCCCccccC-------------CC-CcCHHHHHHHHHHHHHHHh--
Confidence 6776555 99985444787765 44343 2221110000000 00 0001122333344443322
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCC---CeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHh
Q 046506 183 LRHFLRSHVNMAKLFERLVGSDK---RFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINA 259 (310)
Q Consensus 183 ~~~~~~~~~~~a~~l~~~L~~~~---~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 259 (310)
+++.++..++.+++++.|.++. ++.........++.+.+........ + ... ..+ .....++.+.+.+
T Consensus 320 -~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~--~~~--~~~----~~~~~~l~~~l~~ 389 (427)
T 3fq8_A 320 -PGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNY-E--DAK--KSD----LQKFSRFHRGMLE 389 (427)
T ss_dssp -TTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSCCCCSH-H--HHT--TSC----HHHHHHHHHHHHH
T ss_pred -cCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeeEEEEEEecCccccc-c--ccc--ccc----HHHHHHHHHHHHH
Confidence 3455566666666666665420 1211111234455665543211000 0 000 000 1223467777877
Q ss_pred cCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 260 SGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 260 ~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+|.+ +.+. +.. |++++ ..+|++|+++++++|++++.+
T Consensus 390 ~Gi~-v~~~---~~~--r~~~~-~~~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 390 QGIY-LAPS---QFE--AGFTS-LAHTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp TTEE-CCSS---TTS--CEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred CCcE-EecC---CCC--CEEee-CcCCHHHHHHHHHHHHHHHHh
Confidence 8753 3321 112 55534 568999999999999988754
No 225
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.41 E-value=2.1e-12 Score=119.75 Aligned_cols=233 Identities=9% Similarity=0.041 Sum_probs=125.1
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCC
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG 102 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 102 (310)
|+++|+++|++... .+.+|+++..+++.|.+.| +++|.++|++||+++++|++|++. ...........++ .
T Consensus 186 d~~~le~~l~~~~~---~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~-~ 260 (429)
T 4e77_A 186 DLASVRQAFEQYPQ---EVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAGAQDYYHV-I 260 (429)
T ss_dssp CHHHHHHHHHHSTT---TEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTC-C
T ss_pred CHHHHHHHHHhcCC---CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcchHHHhcCC-C
Confidence 89999999975311 2456666666677888888 999999999999999999999744 2221111111122 3
Q ss_pred CCeeeeecccccccccceEEEEEeCchhHHhhhccC-CccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHH
Q 046506 103 ADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTN-PEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVA 181 (310)
Q Consensus 103 ~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~-~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 181 (310)
.|++++ .|++++....|+++. +++.+ +.+... ..+.... + .+-+..+.++.++++.+..
T Consensus 261 pdi~t~--sK~~~~G~~~G~~~~-~~~~~-~~l~~~~~~~~~~t--------------~-~~~~~~~aaa~aal~~~~~- 320 (429)
T 4e77_A 261 PDLTCL--GKIIGGGMPVGAFGG-RREVM-NALAPTGPVYQAGT--------------L-SGNPIAMAAGFACLTEISQ- 320 (429)
T ss_dssp CSEEEE--EGGGGTTSCCEEEEE-CHHHH-TTBTTTSSBCC--C--------------C-CCCHHHHHHHHHHHHHHTS-
T ss_pred CCeeee--cccccCCCCeEEEEE-CHHHH-HHhccCCCccccCC--------------C-CCCHHHHHHHHHHHHHHHh-
Confidence 576644 599987666777665 44333 222110 0011100 0 0111122333444444422
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC---CCeEEecCCCceEEEEEEcCCc-chhhhhhhhccccchhHHHHHHHHHHHHHHH
Q 046506 182 NLRHFLRSHVNMAKLFERLVGSD---KRFEVVFPRHFAVVCFRVSPSA-VMDKLKTKYENSLLSEEERINEFNRELLESI 257 (310)
Q Consensus 182 ~~~~~~~~~~~~a~~l~~~L~~~---~~~~v~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (310)
+++.++..++.+++++.|.++ .++....+....++.+.+.... ...... .. ..+ .....++.+.|
T Consensus 321 --~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~----~~~----~~~~~~~~~~l 389 (429)
T 4e77_A 321 --VGVYETLTELTDSLATGLRHAAKEENIPLVVNHVGGMFGLFFTNADTVTCYQD-VM----NCD----VERFKRFFHLM 389 (429)
T ss_dssp --TTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEECCSSSCCCSHHH-HH----TSC----HHHHHHHHHHH
T ss_pred --cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeEEEEEEccCcccccccc-cc----ccc----HHHHHHHHHHH
Confidence 345555666666666666542 1221111223455666654421 000000 00 000 12234677778
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHH
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLE 302 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~ 302 (310)
.++|. .+.+. +...+|++ ..+|++|+++++++|++++.
T Consensus 390 ~~~Gi-~v~~~---~~~~~~~~---~~~t~e~i~~~l~~l~~~l~ 427 (429)
T 4e77_A 390 LEEGV-YLAPS---AFEAGFMS---LAHSNEDIQKTVNAARRCFA 427 (429)
T ss_dssp HHTTE-ECCSS---TTSCEECC---TTCCHHHHHHHHHHHHHHHT
T ss_pred HHCCe-EEeec---CCCCEEEe---ccCCHHHHHHHHHHHHHHHH
Confidence 88874 33322 22334543 46899999999999998764
No 226
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.35 E-value=1.1e-11 Score=118.59 Aligned_cols=271 Identities=10% Similarity=0.000 Sum_probs=143.9
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHH--HHhCcEEEeeccccccc
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVA--KQFGIWVHVDAAYAGSA 87 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~--~~~g~~l~vD~a~~~~~ 87 (310)
++.+|+++++.+.+|+++|++++++. +.+++++.++|++|.+.+ +++|+++| +++|+++++|++++.+.
T Consensus 220 ~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~ 293 (546)
T 2zy4_A 220 EVAINADPSLNWQYPDSELDKLKDPA------IKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFA 293 (546)
T ss_dssp EEEEECBGGGTTBCCHHHHGGGGSTT------EEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGS
T ss_pred EEEEecCcccCCCCCHHHHHHhhCCC------CeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhc
Confidence 78888887555789999999876432 457777789999999887 56688898 78999999999997654
Q ss_pred ccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCC---------ccccccccc-cccc----
Q 046506 88 CICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNP---------EYLKNKATE-SKQV---- 152 (310)
Q Consensus 88 ~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~---------~y~~~~~~~-~~~~---- 152 (310)
......... ....++++.|++|+++.| .-+|+++..++..+.......| .|....... ....
T Consensus 294 ~~~~s~~~~---~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~ 370 (546)
T 2zy4_A 294 DDFQSLFAI---CPENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRL 370 (546)
T ss_dssp TTCCCHHHH---CGGGEEEEEESTTTTTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHH
T ss_pred ccCcCHHHh---CCCCEEEEEeCccccCCCCcceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhh
Confidence 321111111 112467889999998755 2378888776533322211100 000000000 0000
Q ss_pred c-CCCCc--eeccCCC-c--chHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCceEE-EEEEc
Q 046506 153 V-DYKDW--QITLSRR-F--RSLKLWFVLRNY--GVANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHFAVV-CFRVS 223 (310)
Q Consensus 153 ~-~~~~~--~~~~~~~-~--~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~~~v-~~~~~ 223 (310)
. +.+.. ....+.. + .++++.+....+ +....++..+...++.+.+.+.|. . ++.+ .++..+.+ .+.+.
T Consensus 371 ~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~~~~~~~~~r~~~~~r~~~l~~~L~-~-~~~~-~~~~~~~~l~~~l~ 447 (546)
T 2zy4_A 371 VADSRAVALNHTAGLSTPQQVQMALFSLFALMDEADEYKHTLKQLIRRRETTLYRELG-M-PPLR-DENAVDYYTLIDLQ 447 (546)
T ss_dssp HHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHGGGT-S-SCCC-CTTBCCSEEEEEHH
T ss_pred hhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcC-C-Cccc-CCCCeeEEEEEEHH
Confidence 0 00000 0000111 0 111111111222 233456666667777777788775 3 3332 24455543 44432
Q ss_pred CCcchhhhhhhhccccchhHHHHHH----HHHHHHHHHHhcCcEEEEEeEEC-CEeEEEEEccCCCCCHHHHHHHHHHHH
Q 046506 224 PSAVMDKLKTKYENSLLSEEERINE----FNRELLESINASGKAYMTHAVLG-GIYAIRFAAGATLTEERHVMVAWTVVQ 298 (310)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~l~~~g~~~~~~~~~~-~~~~iRis~~~~~~t~edi~~li~~l~ 298 (310)
... +.... .....+-. -...+.+.+.+.|.....+.... +.+++|+|+. ..++++++.+++.|+
T Consensus 448 ~~~-----~~~~~----~~~~~wl~~~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~--~~~~e~i~~~~~~l~ 516 (546)
T 2zy4_A 448 DVT-----AKLYG----EAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLA--NLNEYEYAAIGRALR 516 (546)
T ss_dssp HHH-----HHHHC----HHHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEEESS--SSCHHHHHHHHHHHH
T ss_pred Hhh-----ccccc----HHHHHHhhccCCHHHHHHHHHHHCCEEEeCccccCCCCCeEEEEec--cCCHHHHHHHHHHHH
Confidence 100 00000 00000000 01234555666776555433222 3468999965 357999999999999
Q ss_pred HHHHHHhh
Q 046506 299 EHLEALLS 306 (310)
Q Consensus 299 ~~~~~~~~ 306 (310)
+++..+.+
T Consensus 517 ~~l~~~~~ 524 (546)
T 2zy4_A 517 KMADELYA 524 (546)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99877653
No 227
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.29 E-value=5e-11 Score=110.23 Aligned_cols=232 Identities=12% Similarity=0.081 Sum_probs=126.2
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
.|+++|+++|++... .+.+|+++..++++|.+.| +++|.++ ++||+++++|++|++. ...........++
T Consensus 184 ~d~~~le~~l~~~~~---~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~- 257 (424)
T 2e7u_A 184 NDPEGLREVLKRRGE---EIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFGGATELLGL- 257 (424)
T ss_dssp TCHHHHHHHHHHHGG---GEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTTHHHHHHTC-
T ss_pred CCHHHHHHHHHhCCC---CEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchhHHHHHhCC-
Confidence 478999999975311 1445666665666898888 9999999 9999999999999844 3222111001122
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhhcc-CCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCH
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLST-NPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGV 180 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 180 (310)
..|++ +.+|++++...+|+++.++ +.. +.+.. ...+.... + .+-+....++.++++.+..
T Consensus 258 ~~di~--s~sK~l~~G~~~G~~~~~~-~~~-~~~~~~~~~~~~~t--------------~-~~~~~~~aaa~aal~~~~~ 318 (424)
T 2e7u_A 258 KPDLV--TLGKILGGGLPAAAYAGRR-EIM-EKVAPLGPVYQAGT--------------L-SGNPLAMAAGLATLELLEE 318 (424)
T ss_dssp CCSEE--EECGGGGTTSSCEEEEECH-HHH-TTBTTTSSBCCCCT--------------T-CSCHHHHHHHHHHHHHHHH
T ss_pred Ccchh--hhhhhhhCCcceEEEEEcH-HHH-hhhcccCCcccCCC--------------C-CCCHHHHHHHHHHHHHHHh
Confidence 36765 5679999755678877654 333 32211 00010000 0 0001122233344443321
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCC---CCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHH
Q 046506 181 ANLRHFLRSHVNMAKLFERLVGSD---KRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESI 257 (310)
Q Consensus 181 ~~~~~~~~~~~~~a~~l~~~L~~~---~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (310)
.+++.++..++.+++++.|+++ .++....++..+++.+.+........ ++. ..+ + .....++.+.|
T Consensus 319 --~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~-~~~---~~~-~----~~~~~~~~~~l 387 (424)
T 2e7u_A 319 --NPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVFFTEGPVVTF-QDA---RRT-D----TELFKRFFHGL 387 (424)
T ss_dssp --CTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSH-HHH---TTS-C----HHHHHHHHHHH
T ss_pred --ccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEEEeCCCCcch-hhh---ccc-C----HHHHHHHHHHH
Confidence 2556777788888888888654 13321112344566666643100000 000 000 0 11234677777
Q ss_pred HhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHH
Q 046506 258 NASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEH 300 (310)
Q Consensus 258 ~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~ 300 (310)
.++|. .+.+. +...+|++ ...+++++++++++|++.
T Consensus 388 ~~~Gv-~v~~~---~~~~~~~~---~~~t~~~i~~~l~~l~~~ 423 (424)
T 2e7u_A 388 LDRGI-YWPPS---NFEAAFLS---VAHREEDVEKTLEALRKA 423 (424)
T ss_dssp HTTTE-ECCSS---SSSCEECC---TTCCHHHHHHHHHHHHHH
T ss_pred HHCCe-EEecc---CCCceEee---ccCCHHHHHHHHHHHHHh
Confidence 77764 44332 12234543 468999999999999875
No 228
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.19 E-value=6.5e-11 Score=108.48 Aligned_cols=226 Identities=10% Similarity=-0.043 Sum_probs=127.8
Q ss_pred eecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 4 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 4 ~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+..|.. ++.+++|.++ +.. + .+.++++.+++|++|.+.+ +|++.++.+++++++|.+|
T Consensus 137 ~~~g~~---~~~~~~d~~~---l~~--------~------~~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ii~De~y 194 (391)
T 3bwn_A 137 TYVRSG---MYKWEGDAWG---FDK--------K------GPYIELVTSPNNPDGTIRE--TVVNRPDDDEAKVIHDFAY 194 (391)
T ss_dssp HTTCBT---TEEEEEESTT---CCC--------C------SCEEEEEESSCTTTCCCCC--CCC-----CCCEEEEECTT
T ss_pred HHcCCe---EEEecCCHHH---cCC--------C------CCEEEEECCCCCCCchhHH--HHHHHhhcCCCEEEEeCCC
Confidence 445665 7788887542 330 1 2557778999999999876 5554223334999999999
Q ss_pred ccccccChhhhhhhcCCCCCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceecc
Q 046506 84 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITL 162 (310)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 162 (310)
+... ... .......+++..|++|+++.| .-+|++++.++..+....... .+....
T Consensus 195 ~~~~-----~~~-l~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~-~~~~~~----------------- 250 (391)
T 3bwn_A 195 YWPH-----YTP-ITRRQDHDIMLFTFSKITGHAGSRIGWALVKDKEVAKKMVEYI-IVNSIG----------------- 250 (391)
T ss_dssp CSTT-----TSC-CCCCBCCSEEEEEHHHHHSCGGGCEEEEEECCHHHHHHHHHHH-HHHHSS-----------------
T ss_pred CCCC-----CCc-cccCCCCeEEEEechhhcCCCccceEEEEecCHHHHHHHHHHh-cccccC-----------------
Confidence 6321 111 111224678999999988754 225888775554433221110 000000
Q ss_pred CCCcchHHHHHHHHHhC---------HHHHHHHHHHHHHHHHHHHHHHcCCCCeEEecCCCc-------------eEEEE
Q 046506 163 SRRFRSLKLWFVLRNYG---------VANLRHFLRSHVNMAKLFERLVGSDKRFEVVFPRHF-------------AVVCF 220 (310)
Q Consensus 163 ~~~~~~~~~~~~l~~~~---------~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v~~~~~~-------------~~v~~ 220 (310)
.-.+....+..+++... ...++++.++..++.+++.+.|++++++++..+... ..+.+
T Consensus 251 ~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~ 330 (391)
T 3bwn_A 251 VSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWL 330 (391)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEE
T ss_pred CCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccCCCcceEEEe
Confidence 00011122223333210 245778888889999999999998888876532211 13445
Q ss_pred EEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEEC-CEeEEEEEccCCCCCHHHHHHHHHHHHH
Q 046506 221 RVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLG-GIYAIRFAAGATLTEERHVMVAWTVVQE 299 (310)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-~~~~iRis~~~~~~t~edi~~li~~l~~ 299 (310)
.+... +.+...+.+.|.....+.... +.+.+|+|+. +++++++.++++|++
T Consensus 331 ~~~~~-------------------------~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~---~~~e~i~~~~~~L~~ 382 (391)
T 3bwn_A 331 GTKEE-------------------------TDLVSELRRHKVMSRAGERCGSDKKHVRVSML---SREDVFNVFLERLAN 382 (391)
T ss_dssp EESSS-------------------------CCHHHHHHHTTEECEEGGGGTCCTTEEEEESC---SCHHHHHHHHHHHHS
T ss_pred cCCcH-------------------------HHHHHHHHHCCEEEccCCCCCCCCCEEEEEec---CCHHHHHHHHHHHHH
Confidence 55421 134445556665443322222 2568999965 479999999999987
Q ss_pred HHHH
Q 046506 300 HLEA 303 (310)
Q Consensus 300 ~~~~ 303 (310)
+++.
T Consensus 383 ~~~~ 386 (391)
T 3bwn_A 383 MKLI 386 (391)
T ss_dssp CC--
T ss_pred HHHh
Confidence 7643
No 229
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.15 E-value=2.3e-09 Score=99.78 Aligned_cols=233 Identities=8% Similarity=-0.011 Sum_probs=128.5
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
-|++++++.|.+... ....|++.-...+.|.+.| +++|.++|++||++|++|.++.+ ........-..++
T Consensus 205 nd~~~l~~~l~~~~~---~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~G~~~a~e~~gv- 278 (454)
T 4ao9_A 205 NDAQTARAQIERHGP---EIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RLAPHGLANKLGI- 278 (454)
T ss_dssp TCHHHHHHHHHHTGG---GEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GGSTTCHHHHHTC-
T ss_pred chHHHHHHHHhhcCC---ceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CCccccchhccCC-
Confidence 367999999987533 2456666666677898888 99999999999999999999963 2222211111233
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhhccC-CccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCH
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTN-PEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGV 180 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~-~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 180 (310)
..|.+++ .|.+++....|.+..+.+ .. +.+... ..+... + ++ .+-+..+.+..++|+.+..
T Consensus 279 ~PDi~t~--gK~lggG~Piga~~~~~e-i~-~~~~~~~~~~~h~-~------------T~-~gnPla~AAala~L~~l~~ 340 (454)
T 4ao9_A 279 RSDLTTL--GKYIGGGMSFGAFGGRAD-VM-ALFDPRTGPLAHS-G------------TF-NNNVMTMAAGYAGLTKLFT 340 (454)
T ss_dssp CCSEEEE--EGGGGTTSSCEEEEECHH-HH-GGGCTTTCSCCCC-C------------TT-TTCHHHHHHHHHHHHHTSC
T ss_pred CCcEEEe--ccccCCCCcceeeeeHHH-HH-HHHhhccCCcccc-C------------CC-CCCHHHHHHHHHHHHHHhc
Confidence 3788766 577776666777776644 33 332111 011100 0 11 1112233444556665544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCC---CCe--EEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHH
Q 046506 181 ANLRHFLRSHVNMAKLFERLVGSD---KRF--EVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLE 255 (310)
Q Consensus 181 ~~~~~~~~~~~~~a~~l~~~L~~~---~~~--~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 255 (310)
+ +..++..++.++|+++|+++ .++ ++.+ ...++.+.+....+.. .......+ ..+...+..
T Consensus 341 ~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg--~G~m~gi~f~~~~~~~-----~~~~~~~d----~~~~~~~~~ 406 (454)
T 4ao9_A 341 P---EAAGALAERGEALRARLNALCANEGVAMQFTG--IGSLMNAHFVQGDVRS-----SEDLAAVD----GRLRQLLFF 406 (454)
T ss_dssp H---HHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEE--ETTEEEEESCCSCCCS-----GGGGTTCC----HHHHHHHHH
T ss_pred c---ChhHHHHHHHHHHHHHHHHHHhhCCCCEEEee--eceEEEEEEecCCCCC-----HHHHHhhh----HHHHHHHHH
Confidence 3 34556666777777776542 011 1211 1234444443321100 00000011 223345666
Q ss_pred HHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 256 SINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 256 ~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
.|.++|. ++.|. +.+.+| .-.|++|||+++++|++++.+..
T Consensus 407 ~ll~~Gv-~~~p~-----~~~~~s---~~~T~~dId~~l~al~~~l~~~~ 447 (454)
T 4ao9_A 407 HLLNEDI-YSSPR-----GFVVLS---LPLTDADIDRYVAAIGSFIGGHG 447 (454)
T ss_dssp HHHHTTE-ECCTT-----CEEECC---TTCCHHHHHHHHHHHHHHHHHSG
T ss_pred HHHHCCE-EEcCC-----CCEEEe---CCCCHHHHHHHHHHHHHHHHhcc
Confidence 7778874 44332 223333 23689999999999999998753
No 230
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.10 E-value=5e-09 Score=97.72 Aligned_cols=234 Identities=13% Similarity=0.032 Sum_probs=129.4
Q ss_pred CHHHHHHHHHHHHH--cCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCC
Q 046506 27 SPDSLMAKINSDVE--AGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV 100 (310)
Q Consensus 27 d~~~Le~~i~~~~~--~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~ 100 (310)
+.+.+++.+..... .+.....+++.-.....|.+.| +++|.++|++||++|++|..+.++......+.--..++
T Consensus 207 ~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv 286 (456)
T 4atq_A 207 GAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGV 286 (456)
T ss_dssp HHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC
T ss_pred HHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCC
Confidence 34555555543211 1112456666666666777755 99999999999999999999977544443222112234
Q ss_pred CCCCeeeeecccccccccceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCH
Q 046506 101 EGADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGV 180 (310)
Q Consensus 101 ~~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 180 (310)
..|+++++ |.+++....|.+..+++ .. +.+ .+..... ++ ++-+..+++..++++.+..
T Consensus 287 -~PDivt~g--K~lggg~P~~av~~~~~-i~-~~~--~~~~~~~--------------Tf-~gnpla~aaala~L~~i~~ 344 (456)
T 4atq_A 287 -VPDIITMA--KGIAGGLPLSAITGRAD-LL-DAV--HPGGLGG--------------TY-GGNPVACAAALAAIDTMEQ 344 (456)
T ss_dssp -CCSEEEEC--GGGGTTSSCEEEEEEHH-HH-TTS--CTTSSCC--------------SS-SSCHHHHHHHHHHHHHHHH
T ss_pred -CCchhhhh--hcccCcCCceeeEecHH-HH-hcc--cccCCCC--------------CC-CCChHHHHhhHHHHHHHhh
Confidence 37998875 77776666788877755 22 221 1111111 11 1112233444455555544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCC----CC--eEEecCC--CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHH
Q 046506 181 ANLRHFLRSHVNMAKLFERLVGSD----KR--FEVVFPR--HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRE 252 (310)
Q Consensus 181 ~~~~~~~~~~~~~a~~l~~~L~~~----~~--~~v~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (310)
++ +.++..++.+++.++|+++ +. -.++... ...++.+.+..... ..+ + ......
T Consensus 345 ~~---l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~~----------~~~-~----~~~~~~ 406 (456)
T 4atq_A 345 HD---LNGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGAMLAIELVQPGS----------KEP-N----AELTKA 406 (456)
T ss_dssp TT---HHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEETTEEEEEEBCTTS----------CCB-C----HHHHHH
T ss_pred cc---HHHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecceEEEEEEecCCC----------CCc-C----HHHHHH
Confidence 33 4455555666666655542 11 1122211 12344555543210 000 1 334467
Q ss_pred HHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 253 LLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 253 l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+...+.++|.+..... ....+||+++. ...|++++|.+++.|.+.++.
T Consensus 407 v~~~~~~~Gvl~~~~g--~~~~~irl~Pp-L~it~~~id~~l~~l~~al~a 454 (456)
T 4atq_A 407 VAAACLKEGVIILTCG--TYGNVIRLLPP-LVISDELLIDGLEVLAAAIKA 454 (456)
T ss_dssp HHHHHHHTTEECEEEC--TTSCEEEECCC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEecC--CCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHh
Confidence 7888888886433221 12468999955 568999999999999988764
No 231
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.10 E-value=2.2e-10 Score=105.46 Aligned_cols=237 Identities=13% Similarity=0.084 Sum_probs=134.0
Q ss_pred ceecCCCCCCEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEecc-CCcccccCC---hHHHHHHHHHhCcEEE
Q 046506 3 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIG-TTAITAVDT---LKPLCDVAKQFGIWVH 78 (310)
Q Consensus 3 a~~~g~~~~~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~-~~~~G~~~p---l~~I~~l~~~~g~~l~ 78 (310)
++..|.. ++.+|..+.+++.+|+++|++++++... +.++++..+ +|++|.+.+ +++|+++|++||++++
T Consensus 139 ~~~~g~~---~~~v~~~~~~~~~~d~~~l~~~l~~~~~----~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi 211 (405)
T 3k7y_A 139 IESRGFN---LKYINFFDYNLIDINYDLFLNDLRNIPN----GSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVII 211 (405)
T ss_dssp HHTTTCE---EEEECCEETTTTEECHHHHHHHHHHSCS----SCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEE
T ss_pred HHHcCCe---EEEEeccccccCCcCHHHHHHHHHhCCC----CeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEE
Confidence 3456666 8999983222478999999999976311 235555544 699999866 6678899999999999
Q ss_pred eecccccccccC-h----hhhhhhcCCCCCCeeeeeccccccc-ccceEEEEE--eCchhHHhhh---cc--CCcccccc
Q 046506 79 VDAAYAGSACIC-P----EFRHFIDGVEGADSFSLNAHKWFFT-TLDCCCLWV--KDPSDLVNSL---ST--NPEYLKNK 145 (310)
Q Consensus 79 vD~a~~~~~~~~-~----~~~~~~~~~~~~D~~~~~~hK~l~~-p~g~g~l~v--~~~~~~~~~~---~~--~~~y~~~~ 145 (310)
+|.++....... + ....... ...--++..|+.|.++. ..-+|++++ .+++.+.+.. .. ...+....
T Consensus 212 ~De~Y~~l~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 290 (405)
T 3k7y_A 212 FDIAYQGFGHTNLEEDVLLIRKFEE-KNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPV 290 (405)
T ss_dssp EEESCTTTSSSSTTGGGHHHHHHHT-TTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCC
T ss_pred EecCcccccCCCcccchHHHHHHHh-cCCcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCc
Confidence 999986544321 1 0111111 11112456899999984 456787754 3443322111 00 00110000
Q ss_pred ccccccccCCCCceeccCCCcchHHHHHHHHH--hC---HHHHHHHHHHHHHHHHHHHHHHc----CCC---CeEEecCC
Q 046506 146 ATESKQVVDYKDWQITLSRRFRSLKLWFVLRN--YG---VANLRHFLRSHVNMAKLFERLVG----SDK---RFEVVFPR 213 (310)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~---~~~~~~~~~~~~~~a~~l~~~L~----~~~---~~~v~~~~ 213 (310)
.+.+..+..++.. +. .+.+..+.++..+..+.+.+.|+ ++. ++++. ++
T Consensus 291 -------------------~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~-~p 350 (405)
T 3k7y_A 291 -------------------IHTNRILCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVY-KK 350 (405)
T ss_dssp -------------------HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGG-SS
T ss_pred -------------------HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccc-cC
Confidence 0111111222221 11 12244555667888888999998 652 13433 45
Q ss_pred CceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHH
Q 046506 214 HFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVA 293 (310)
Q Consensus 214 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~l 293 (310)
+.+.+.|.-.+ .+..++| ++..+++.|. . |||+.. .++++|+.+
T Consensus 351 ~gg~f~~~~l~--------------------------~~~~~~L-~~~gV~v~p~----~---Ris~a~--~~~~~i~~~ 394 (405)
T 3k7y_A 351 QRGLFSFVPLL--------------------------AKIAEHL-KTHHIYIINN----G---RINVSG--ITKNNVDYI 394 (405)
T ss_dssp CCSSEEECGGG--------------------------GGGTTTT-TTTTEECCTT----S---EEEGGG--CCTTHHHHH
T ss_pred CceEEEecCCC--------------------------HHHHHHH-HHCCEeecCC----C---eEEEec--cCHHHHHHH
Confidence 55544441111 0223455 4444555542 2 999763 678899999
Q ss_pred HHHHHHHHHH
Q 046506 294 WTVVQEHLEA 303 (310)
Q Consensus 294 i~~l~~~~~~ 303 (310)
+++|++++.+
T Consensus 395 ~~~i~~~~~~ 404 (405)
T 3k7y_A 395 ADKICLSLSQ 404 (405)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhh
Confidence 9999988754
No 232
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=98.64 E-value=1.6e-11 Score=114.93 Aligned_cols=235 Identities=8% Similarity=-0.054 Sum_probs=128.2
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
-|+++|+++|++... .+.+|++....+++|.+.| +++|+++|++||+++++|++++ + .......-...++
T Consensus 218 ~d~~~l~~~l~~~~~---~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~-r~g~~~a~~~~gv- 291 (465)
T 2yky_A 218 NDVEGTADLLKRHGH---DCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-S-RLSGGGAQEMLGI- 291 (465)
Confidence 368999999974211 1345666665666898777 9999999999999999999998 4 2221110000111
Q ss_pred CCCeeeeecccccccccceEEEEEeCchhHHhhhcc---CCccccccccccccccCCCCceeccCCCcchHHHHHHHHHh
Q 046506 102 GADSFSLNAHKWFFTTLDCCCLWVKDPSDLVNSLST---NPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNY 178 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p~g~g~l~v~~~~~~~~~~~~---~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 178 (310)
..|++ +..|++++....|+++.+++ .+ +.+.. .+-+... ++ ++-+....+..++++.+
T Consensus 292 ~pDi~--t~sK~lg~G~piG~v~~~~~-i~-~~l~~~~~g~~~~~~--------------T~-~~npla~aAa~aaL~~l 352 (465)
T 2yky_A 292 SADLT--TLGKYIGGGMSFGAFGGRRD-LM-ERFDPARDGAFAHAG--------------TF-NNNILTMSAGHAALTQI 352 (465)
Confidence 25665 45699987555777665543 33 22211 0001111 01 11112233334455544
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHcCCC-CeEEec--CCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHH
Q 046506 179 GVANLRHFLRSHVNMAKLFERLVGSDK-RFEVVF--PRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLE 255 (310)
Q Consensus 179 ~~~~~~~~~~~~~~~a~~l~~~L~~~~-~~~v~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 255 (310)
.. +.+.++..++.++++++|.++. ...+.. +....++.+.+....... +......+ ......+.+
T Consensus 353 ~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~-----~~~~~~~d----~~~~~~~~~ 420 (465)
T 2yky_A 353 YT---RQAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRS-----AGDVRAAD----QQLKELFFF 420 (465)
Confidence 33 3467777788888888887641 222211 223455666554310000 00000000 112346677
Q ss_pred HHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhh
Q 046506 256 SINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLS 306 (310)
Q Consensus 256 ~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~ 306 (310)
.|.++|.+.. +.... . ++ ...|++||++++++|++.+..++.
T Consensus 421 ~ll~~GV~v~-p~~~~---~--~s---~~~t~edid~~l~~l~~~l~~~~~ 462 (465)
T 2yky_A 421 HMLRKGIYLA-PRGMY---A--LS---LEIADAGRDAFAEALADFIGEQRA 462 (465)
Confidence 7777775443 32111 1 33 457899999999999998877643
No 233
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.04 E-value=1.5e-08 Score=94.87 Aligned_cols=241 Identities=8% Similarity=-0.011 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCC
Q 046506 29 DSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGAD 104 (310)
Q Consensus 29 ~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D 104 (310)
+++++.|.+... .....+++.-.....|.+.| +++|.++|++||++|++|..+.++......+.-...++ ..|
T Consensus 223 ~~l~~~i~~~~~--~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv-~PD 299 (473)
T 4e3q_A 223 RELEETIQREGA--DTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDF-TPD 299 (473)
T ss_dssp HHHHHHHHHHCG--GGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTC-CCS
T ss_pred HHHHHHHHhhCC--CceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCC-CCC
Confidence 456666654321 12445666666666677655 89999999999999999999987654443222112233 379
Q ss_pred eeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHhCHHHH
Q 046506 105 SFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYGVANL 183 (310)
Q Consensus 105 ~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 183 (310)
++++ .|.+++. ...|.+.++++ .. +.+........... .-.++ ++-+..+.+..++++.+.+
T Consensus 300 i~t~--~K~l~gG~~Pl~av~~~~~-i~-~~~~~~~~~~~~~~---------hg~T~-~Gnpla~Aaala~L~~i~~--- 362 (473)
T 4e3q_A 300 AIIS--SKNLTAGFFPMGAVILGPE-LS-KRLETAIEAIEEFP---------HGFTA-SGHPVGCAIALKAIDVVMN--- 362 (473)
T ss_dssp EEEE--CGGGGTTSSCCEEEEECHH-HH-HHHHHHHHHHSCCC---------CCCTT-TTCHHHHHHHHHHHHHHHH---
T ss_pred hHHh--cccccCCCCCcccccccHH-HH-HHhccccccccccc---------cCCCC-CCCcchhhhhhhhhhhhcc---
Confidence 8876 4877654 55777777655 22 22210000000000 00000 1111222333444444433
Q ss_pred HHHHHHHHHHHHHHHHHHcC---CCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhc
Q 046506 184 RHFLRSHVNMAKLFERLVGS---DKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINAS 260 (310)
Q Consensus 184 ~~~~~~~~~~a~~l~~~L~~---~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 260 (310)
+...++..++.++|+++|++ .|.+.=+.. ...++.+.+..... ...+.+. -......+.+.+.++
T Consensus 363 ~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vRG-~Gl~~gielv~~~~---------~~~~~~~--~~~~~~~~~~~~~~~ 430 (473)
T 4e3q_A 363 EGLAENVRRLAPRFEERLKHIAERPNIGEYRG-IGFMWALEAVKDKA---------SKTPFDG--NLSVSERIANTCTDL 430 (473)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHTTSTTEEEEEE-ETTEEEEEECSBTT---------TTBCCCG--GGCHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcCCCeeEEee-cceEEEEEEecCcc---------ccccccc--cHHHHHHHHHHHHHC
Confidence 34455556677777777654 344421111 12234454432110 0000000 012335677778888
Q ss_pred CcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHhhc
Q 046506 261 GKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALLSA 307 (310)
Q Consensus 261 g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~~~ 307 (310)
|.+. .+. ...+|++++ ...|++|+|.+++++.+.+.++.++
T Consensus 431 Gll~-~~~----g~~i~l~PP-L~it~~eid~~~~~l~~al~~v~ae 471 (473)
T 4e3q_A 431 GLIC-RPL----GQSVVLCPP-FILTEAQMDEMFDKLEKALDKVFAE 471 (473)
T ss_dssp TEEC-EEE----TTEEEECCC-TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEE-Eec----CCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 8543 332 247899855 6789999999999999988876543
No 234
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=98.79 E-value=9.2e-08 Score=88.26 Aligned_cols=230 Identities=10% Similarity=0.011 Sum_probs=127.5
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCC---hHHHHHHHHHhCcEEEeeccccccccc
Q 046506 13 FRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDT---LKPLCDVAKQFGIWVHVDAAYAGSACI 89 (310)
Q Consensus 13 v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~p---l~~I~~l~~~~g~~l~vD~a~~~~~~~ 89 (310)
|...+..+.+.+.+|++.+++.+...+. ..++++...++|++|...+ +++|+++|++++++++.|.++......
T Consensus 162 V~~~~~~~~~~~~~d~~~~~~~l~~~~~---~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~ 238 (420)
T 4h51_A 162 ICTYAYYDPKTVSLNFEGMKKDILAAPD---GSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASG 238 (420)
T ss_dssp EEEEECEEGGGTEECHHHHHHHHHHSCS---SCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTS
T ss_pred EEeeccccccccCCCHHHHHHHHhccCC---CcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccC
Confidence 4333333223567899999999876532 2446666777899999755 778999999999999999998655432
Q ss_pred Chhhh-----hhhcCCCCCCeeeeecccccccc-cceEEEEEeCchh--HHhhhc-----cCCccccccccccccccCCC
Q 046506 90 CPEFR-----HFIDGVEGADSFSLNAHKWFFTT-LDCCCLWVKDPSD--LVNSLS-----TNPEYLKNKATESKQVVDYK 156 (310)
Q Consensus 90 ~~~~~-----~~~~~~~~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~--~~~~~~-----~~~~y~~~~~~~~~~~~~~~ 156 (310)
..... ..... ..-=+++.|..|.++.+ .-+|++.+..+.. ..+... ....|..
T Consensus 239 ~~~~~~~~~~~~~~~-~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~------------- 304 (420)
T 4h51_A 239 SLDTDAYAARLFARR-GIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTC------------- 304 (420)
T ss_dssp CHHHHTHHHHHHHHT-TCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSS-------------
T ss_pred CcccchHHHHhHHhh-CceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCc-------------
Confidence 21110 00111 11224567999987754 3377776654421 111100 0001110
Q ss_pred CceeccCCCcchHHHHHHHHHh--------CHHHHHHHHHHHHHHHHHHHHHHcCCC--C-eEEecCCCceEEEEEEcCC
Q 046506 157 DWQITLSRRFRSLKLWFVLRNY--------GVANLRHFLRSHVNMAKLFERLVGSDK--R-FEVVFPRHFAVVCFRVSPS 225 (310)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~~~a~~l~~~L~~~~--~-~~v~~~~~~~~v~~~~~~~ 225 (310)
....+...+...+ ....++.+.++..++.+.+.+.|.+.. + +..+. ++.+.++| .+.
T Consensus 305 ---------~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~-~q~GmF~~--~gl 372 (420)
T 4h51_A 305 ---------PPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWEHVI-NQIGMFSF--LGL 372 (420)
T ss_dssp ---------CCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHH-HCCSSEEE--CCC
T ss_pred ---------chHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeec-CCCceEEe--cCc
Confidence 0111111111111 123456677788888888999987651 1 11111 22233333 332
Q ss_pred cchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHHh
Q 046506 226 AVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEALL 305 (310)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~~ 305 (310)
+ .+..+.|.+.| +++.+ +. |||+.. .+++.|+++.++|.++++.+.
T Consensus 373 s------------------------~e~v~~L~e~~-Vy~~~----~g---Ris~Ag--l~~~ni~~~a~aI~~vvr~i~ 418 (420)
T 4h51_A 373 S------------------------KAQCEYCQNHN-IFITV----SG---RANMAG--LTHETALMLAQTINDAVRNVN 418 (420)
T ss_dssp C------------------------HHHHHHHHHTT-EECCT----TC---EEEGGG--CCHHHHHHHHHHHHHHHC---
T ss_pred C------------------------HHHHHHHHhCC-EEEcC----CC---EEEecc--CCHHHHHHHHHHHHHHHHHhh
Confidence 1 12234555555 44432 22 999763 688999999999999887654
No 235
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=98.78 E-value=6.3e-09 Score=96.40 Aligned_cols=212 Identities=10% Similarity=-0.027 Sum_probs=121.3
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCCCCC
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGAD 104 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~~~D 104 (310)
.+|+++|++++++. +.++++++++|++|.+.+ + +++ ++..+.|.++....... ... . ...+
T Consensus 183 ~~d~~~l~~~~~~~------~k~v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~~~~~s~---~~~-~--~~~~ 243 (427)
T 2hox_A 183 AGNAANYVNVSNPE------QYIEMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYYWPHYTP---IKY-K--ADED 243 (427)
T ss_dssp EEEGGGGTTCSCGG------GEEEEEESSCTTTCCCCC-C----SST--TCEEEEECTTCSTTTSC---CCS-C--BCCS
T ss_pred cCCHHHHHHhhcCC------ceEEEEcCCCCCcccccH-H----HHc--CCCEEEeecccCCCCCc---ccc-C--CCce
Confidence 56778888877643 457888899999999988 4 333 56788887763211000 000 0 2478
Q ss_pred eeeeecccccccc-cceEEEEEeCchhHHhhhccCCccccccccccccccCCCCceeccCCCcchHHHHHHHHHh-----
Q 046506 105 SFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEYLKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNY----- 178 (310)
Q Consensus 105 ~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----- 178 (310)
++..|++|.++.| .-+|+++++++..+....... .+.... .-.+....+..+++..
T Consensus 244 i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~~-~~~~~~-----------------~~~~~q~a~~~~L~~~~~~l~ 305 (427)
T 2hox_A 244 ILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYM-TKNTEG-----------------TPRETQLRSLKVLKEVVAMVK 305 (427)
T ss_dssp EEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHHH-HHHTSS-----------------CCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeChhcCCCCCceEEEEEECCHHHHHHHHHHH-HhcCCC-----------------CCHHHHHHHHHHhhcchhhhc
Confidence 9999999988754 227888876565443321111 000000 0001111222222211
Q ss_pred -----CHHHHHHHHHHHHHHHHHHHHHHcCCCCeEE--ec-----------CCC-ceEEEEEEcCCcchhhhhhhhcccc
Q 046506 179 -----GVANLRHFLRSHVNMAKLFERLVGSDKRFEV--VF-----------PRH-FAVVCFRVSPSAVMDKLKTKYENSL 239 (310)
Q Consensus 179 -----~~~~~~~~~~~~~~~a~~l~~~L~~~~~~~v--~~-----------~~~-~~~v~~~~~~~~~~~~~~~~~~~~~ 239 (310)
....+++..++..++.+++.+.|++.+++.+ +. .|. ...+.+.+....
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~~~------------- 372 (427)
T 2hox_A 306 TQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEE------------- 372 (427)
T ss_dssp HHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSGG-------------
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECCCcH-------------
Confidence 0123445667788889999999998888876 21 122 344555554310
Q ss_pred chhHHHHHHHHHHHHHHHH-hcCcEEEEE-eEEC-CEeEEEEEccCCCCCHHHHHHHHHHHHHHH
Q 046506 240 LSEEERINEFNRELLESIN-ASGKAYMTH-AVLG-GIYAIRFAAGATLTEERHVMVAWTVVQEHL 301 (310)
Q Consensus 240 ~~~~~~~~~~~~~l~~~l~-~~g~~~~~~-~~~~-~~~~iRis~~~~~~t~edi~~li~~l~~~~ 301 (310)
.++.+.+. +.|. .+.+ .... +.+++|+|+. +++++++.+++.|++++
T Consensus 373 -----------~~~~~~ll~~~gI-~v~pg~~f~~~~~~~Ris~~---~~~e~l~~~l~~l~~~~ 422 (427)
T 2hox_A 373 -----------DKDCYQTFQNGRI-NTQNGVGFEASSRYVRLSLI---KTQDDFDQLMYYLKDMV 422 (427)
T ss_dssp -----------GCSHHHHHHHTTE-ECEEGGGGTSCTTEEEEECS---SCHHHHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHHHCCE-EEcCCCccCCCCCEEEEEec---CCHHHHHHHHHHHHHHH
Confidence 13445544 4554 4443 2222 3578999966 37889999999988765
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=98.77 E-value=9.7e-09 Score=102.44 Aligned_cols=235 Identities=11% Similarity=0.023 Sum_probs=119.6
Q ss_pred HHHHHHHHHHH--HcCCCcEEEEEecc-CCcccccCC----hHHHHHHHHHhCcEEEeecccccccccChhhhhhhcCCC
Q 046506 29 DSLMAKINSDV--EAGLIPLFLCATIG-TTAITAVDT----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 101 (310)
Q Consensus 29 ~~Le~~i~~~~--~~~~~~~~v~~~~~-~~~~G~~~p----l~~I~~l~~~~g~~l~vD~a~~~~~~~~~~~~~~~~~~~ 101 (310)
++|++.|.+.. .....+..|++.-. ....|.+.| +++|.++|++||++|++|.++.++......+.--..++
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv- 655 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGC- 655 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSS-
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCC-
Confidence 67777776421 11123445555553 566677655 99999999999999999999876543332221111233
Q ss_pred CCCeeeeecccccccc-cceEEEEEeCchhHHhhhccCCcc-ccccccccccccCCCCceeccCCCcchHHHHHHHHHhC
Q 046506 102 GADSFSLNAHKWFFTT-LDCCCLWVKDPSDLVNSLSTNPEY-LKNKATESKQVVDYKDWQITLSRRFRSLKLWFVLRNYG 179 (310)
Q Consensus 102 ~~D~~~~~~hK~l~~p-~g~g~l~v~~~~~~~~~~~~~~~y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 179 (310)
..|+++ ..|.+++. ...|+++.+++ .. +.+...... .+.. -.++ ++-+..+.+..++++.+.
T Consensus 656 ~PDiit--lsK~L~gG~~Plgav~~~~~-i~-~~~~~~~~~~~~~h-----------g~T~-~g~Pla~Aaala~L~~i~ 719 (831)
T 4a0g_A 656 KPDIAC--FAKLLTGGMVPLAVTLATDA-VF-DSFSGDSKLKALLH-----------GHSY-SAHAMGCATAAKAIQWFK 719 (831)
T ss_dssp CCSEEE--ECGGGGTTSSCCEEEEECHH-HH-HTTCSSCGGGSCCC-----------CCTT-TTCHHHHHHHHHHHHHHH
T ss_pred CCcEEE--EecccccCccCcEEEEECHH-HH-HHHhccccccccee-----------ecCC-cccHHHHHHHHHHHHHHH
Confidence 368765 56988653 24577766544 33 333211000 0000 0010 111122334444555442
Q ss_pred HHHHHHHHHHHHHH--------HHHHHHHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHH
Q 046506 180 VANLRHFLRSHVNM--------AKLFERLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNR 251 (310)
Q Consensus 180 ~~~~~~~~~~~~~~--------a~~l~~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (310)
.+.+ .++..++ .+.+.+.+.+.|.+.-+.. ...++.+.+..... ....-.....
T Consensus 720 ~~~l---~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vrg-~Gl~~~iel~~~~~--------------~~~~~~~~a~ 781 (831)
T 4a0g_A 720 DPET---NHNITSQGKTLRELWDEELVQQISSHSAVQRVVV-IGTLFALELKADAS--------------NSGYASLYAK 781 (831)
T ss_dssp CTTT---CTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEEE-ETTEEEEEEC-----------------------CHHHH
T ss_pred hhHH---HHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEee-cccEEEEEEecCcc--------------ccccchHHHH
Confidence 2222 2222111 1234455556666644322 23345555543100 0000012234
Q ss_pred HHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 252 ELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 252 ~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.+.+.+.++|. ++.+. ..+||++++ +.+|++||++++++|.+.++++
T Consensus 782 ~~~~~l~e~Gv-~v~p~----g~~lrl~pp-~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 782 SLLIMLREDGI-FTRPL----GNVIYLMCG-PCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp HHHHHHHHTTE-ECCCB----TTEEEEECC-TTCCHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHCCc-EEEec----CCEEEEECC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 67777888874 44332 368999955 6789999999999999877543
No 237
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=69.69 E-value=9.7 Score=30.69 Aligned_cols=51 Identities=18% Similarity=0.116 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEE
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVH 78 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~ 78 (310)
.-+-|..++=..-.+..|..|++....+..|......++.++|++||+.++
T Consensus 143 ~GHTEAavdLarLAGl~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~ii 193 (204)
T 1tks_A 143 RGHTEAAVQLSTLAGLQPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKII 193 (204)
T ss_dssp CCHHHHHHHHHHHTTSCSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEE
T ss_pred CCcHHHHHHHHHHcCCCceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEE
Confidence 344455555444457789889888886778999999999999999998765
No 238
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=66.78 E-value=2.5 Score=38.73 Aligned_cols=30 Identities=20% Similarity=0.255 Sum_probs=26.8
Q ss_pred cCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 53 GTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 53 ~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
..+-.|+.++++++++-||++|+.|++|.+
T Consensus 69 i~~~~Gt~~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 69 LCTRSGNEDEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred eCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 345678999999999999999999999986
No 239
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=61.08 E-value=3.8 Score=37.77 Aligned_cols=29 Identities=14% Similarity=0.014 Sum_probs=25.5
Q ss_pred CCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 54 TTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 54 ~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
.+..|+.++++++++.||++|+.|++|.+
T Consensus 72 d~~~Gt~~df~~lv~~aH~~Gi~VilD~V 100 (483)
T 3bh4_A 72 RTKYGTKSELQDAIGSLHSRNVQVYGDVV 100 (483)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 34568888899999999999999999986
No 240
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=60.58 E-value=3.7 Score=37.47 Aligned_cols=29 Identities=10% Similarity=0.070 Sum_probs=25.8
Q ss_pred CCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 54 TTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 54 ~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
....|+.++++++++-||++|+.|++|.+
T Consensus 58 dp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 86 (448)
T 1g94_A 58 QSRGGNRAQFIDMVNRCSAAGVDIYVDTL 86 (448)
T ss_dssp CBTTBCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 34568888999999999999999999986
No 241
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=59.83 E-value=4.2 Score=37.42 Aligned_cols=28 Identities=21% Similarity=0.031 Sum_probs=24.9
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+..|+.++++++++-||++|+.|++|.+
T Consensus 75 p~~Gt~~df~~lv~~aH~~Gi~VilD~V 102 (480)
T 1ud2_A 75 TKYGTKAQLERAIGSLKSNDINVYGDVV 102 (480)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 4467788899999999999999999986
No 242
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=59.58 E-value=4.3 Score=37.84 Aligned_cols=28 Identities=18% Similarity=0.102 Sum_probs=24.9
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+..|+.++++++++-||++|+.|++|.+
T Consensus 76 p~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 103 (515)
T 1hvx_A 76 TKYGTKAQYLQAIQAAHAAGMQVYADVV 103 (515)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4467788899999999999999999986
No 243
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=59.42 E-value=4.3 Score=37.40 Aligned_cols=28 Identities=25% Similarity=0.160 Sum_probs=25.1
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
...|+.++++++++-||++|+.|++|.+
T Consensus 77 p~~Gt~~df~~Lv~~aH~~Gi~VilD~V 104 (485)
T 1wpc_A 77 TKYGTRSQLQAAVTSLKNNGIQVYGDVV 104 (485)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4567888899999999999999999986
No 244
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=59.30 E-value=4.4 Score=36.85 Aligned_cols=28 Identities=29% Similarity=0.361 Sum_probs=24.5
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+..|+.++++++++-||++|+.+++|.+
T Consensus 81 ~~~Gt~~df~~lv~~~H~~Gi~VilD~V 108 (435)
T 1mxg_A 81 TRFGSKEELVRLIQTAHAYGIKVIADVV 108 (435)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3457777899999999999999999986
No 245
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=58.00 E-value=29 Score=27.96 Aligned_cols=52 Identities=19% Similarity=0.141 Sum_probs=40.5
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEecc-CCcccccCChHHHHHHHHHhCcEEE
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIG-TTAITAVDTLKPLCDVAKQFGIWVH 78 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~-~~~~G~~~pl~~I~~l~~~~g~~l~ 78 (310)
...+-|..++=..-.+..|..|++... -+..|......++.++|++||+.++
T Consensus 141 R~GhTEaavdLarlAGl~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~i 193 (206)
T 3mio_A 141 RPGHTEAAVDLARMAGLQPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALI 193 (206)
T ss_dssp CCCHHHHHHHHHHHTTSCSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEE
T ss_pred CCChHHHHHHHHHHcCCCceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEE
Confidence 345566677665556778988888773 4567999999999999999999875
No 246
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=57.05 E-value=4.4 Score=32.46 Aligned_cols=49 Identities=20% Similarity=0.270 Sum_probs=34.8
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhC--cEEEeecccccc
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFG--IWVHVDAAYAGS 86 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g--~~l~vD~a~~~~ 86 (310)
+.++|++++.... ..+.+. .|.+..++++.+.++++| +.+|+|-..|.+
T Consensus 18 ~~~~l~~al~s~~------~~ifll-----~g~i~~l~~~v~~lk~~~K~v~Vh~Dli~Gls 68 (192)
T 3kts_A 18 NQKDMEKILELDL------TYMVML-----ETHVAQLKALVKYAQAGGKKVLLHADLVNGLK 68 (192)
T ss_dssp SSHHHHHHTTSSC------CEEEEC-----SEETTTHHHHHHHHHHTTCEEEEEGGGEETCC
T ss_pred CHHHHHHHHcCCC------CEEEEe-----cCcHHHHHHHHHHHHHcCCeEEEecCchhccC
Confidence 5588999986531 133332 356788999999999998 567888776543
No 247
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=57.01 E-value=5.1 Score=36.41 Aligned_cols=58 Identities=16% Similarity=0.039 Sum_probs=39.6
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEE---------------EeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLC---------------ATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~---------------~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
.=|+..+.+.|.--++-|+..+.+. ........|+.++++++++-||++|+.|++|.+
T Consensus 19 ~Gd~~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V 91 (441)
T 1lwj_A 19 VGDFRGLKNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLDLP 91 (441)
T ss_dssp SCCHHHHHHTHHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCHHHHHHhhHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3467888888866555454321110 012234467888899999999999999999986
No 248
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=55.56 E-value=4.9 Score=36.62 Aligned_cols=27 Identities=26% Similarity=0.399 Sum_probs=24.0
Q ss_pred cccccCChHHHHHHHHHhCcEEEeecc
Q 046506 56 AITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 56 ~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
..|+.++++++++-||++|+.+++|..
T Consensus 79 ~~Gt~~~~~~lv~~~h~~Gi~vi~D~V 105 (449)
T 3dhu_A 79 EYGTLADFKALTDRAHELGMKVMLDIV 105 (449)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 357778899999999999999999986
No 249
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=55.38 E-value=5.6 Score=36.54 Aligned_cols=28 Identities=25% Similarity=0.421 Sum_probs=24.8
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+..|+.++++++++-||++|+.|++|.+
T Consensus 92 p~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (478)
T 2guy_A 92 ENYGTADDLKALSSALHERGMYLMVDVV 119 (478)
T ss_dssp TTSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3457788899999999999999999986
No 250
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=53.63 E-value=5.7 Score=37.12 Aligned_cols=28 Identities=14% Similarity=0.082 Sum_probs=25.0
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
...|+.++++++++-||++|+.|++|.+
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 114 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVV 114 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 5568888899999999999999999975
No 251
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=53.61 E-value=33 Score=27.87 Aligned_cols=50 Identities=12% Similarity=0.048 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEE
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVH 78 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~ 78 (310)
..+=|..++=..-.+..|..|++... +..|......++.++|++||+.++
T Consensus 151 ~GhTEAavdLarLAGl~Pa~vicEi~-~~dG~mar~~~l~~fA~~h~l~~i 200 (217)
T 1g57_A 151 GGHTEATIDLMTLAGFKPAGVLCELT-NDDGTMARAPECIEFANKHNMALV 200 (217)
T ss_dssp CSHHHHHHHHHHHTTSCSCEEEEEBB-CTTSSBCCHHHHHHHHHHTTCEEE
T ss_pred CCcHHHHHHHHHHcCCCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCCEE
Confidence 34456666555556778888888766 567999999999999999998765
No 252
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=53.30 E-value=5.6 Score=35.73 Aligned_cols=29 Identities=17% Similarity=0.149 Sum_probs=25.0
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
...|+.++++++++-||++|+.|++|.+.
T Consensus 63 ~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~ 91 (405)
T 1ht6_A 63 SKYGNAAELKSLIGALHGKGVQAIADIVI 91 (405)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 44577788999999999999999999863
No 253
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=52.32 E-value=35 Score=27.96 Aligned_cols=51 Identities=8% Similarity=-0.033 Sum_probs=39.7
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEE
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVH 78 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~ 78 (310)
..-+-|..++=..-.+..|..|++...+ ..|......++.++|++||+.++
T Consensus 161 R~GHTEaaVdLarlAGl~Pa~VicEi~~-ddG~mar~~~l~~fA~~h~l~~i 211 (227)
T 1snn_A 161 RQGHTEMTVALAELANLVPITTICEMMG-DDGNAMSKNETKRYAEKHNLIYL 211 (227)
T ss_dssp CCSHHHHHHHHHHHTTSCSEEEEEEEBC-TTSSBCCHHHHHHHHHHHTCCEE
T ss_pred CCCchHHHHHHHHHcCCCceEEEEEEeC-CCCCcCCHHHHHHHHHHcCCcEE
Confidence 4445566666555567789888887774 56999999999999999998875
No 254
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=52.20 E-value=6.8 Score=36.45 Aligned_cols=26 Identities=19% Similarity=0.222 Sum_probs=23.8
Q ss_pred ccccCChHHHHHHHHHhCcEEEeecc
Q 046506 57 ITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 57 ~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
.|+.++++++++-||++|+.|++|.+
T Consensus 76 ~Gt~~dfk~Lv~~aH~~Gi~VilD~V 101 (549)
T 4aie_A 76 YGTMADMDELISKAKEHHIKIVMDLV 101 (549)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 47778899999999999999999986
No 255
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=51.53 E-value=5.9 Score=36.49 Aligned_cols=28 Identities=25% Similarity=0.354 Sum_probs=24.9
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
...|+.++++++++-||++|+.|++|.+
T Consensus 76 p~~Gt~~d~~~Lv~~aH~~Gi~VilD~V 103 (488)
T 1wza_A 76 PDYGTLEDFHKLVEAAHQRGIKVIIDLP 103 (488)
T ss_dssp GGGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3457888899999999999999999986
No 256
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=50.77 E-value=7.4 Score=35.22 Aligned_cols=56 Identities=16% Similarity=0.101 Sum_probs=38.3
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEE--------------EeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLC--------------ATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~--------------~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
|+..+.+.|+--++-|+..+.+. ........|+.++++++++-||++|+.+++|.+
T Consensus 34 dl~gi~~~Ldyl~~LGv~~i~l~Pi~~~~~~~y~~~dy~~idp~~Gt~~d~~~lv~~ah~~Gi~vilD~V 103 (424)
T 2dh2_A 34 NLAGLKGRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLT 103 (424)
T ss_dssp SHHHHHTTHHHHHHTTCSEEEECCCEEECTTCSTTEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 66777777765444444321111 112334568888999999999999999999986
No 257
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=50.46 E-value=9.1 Score=35.05 Aligned_cols=56 Identities=18% Similarity=0.234 Sum_probs=38.6
Q ss_pred CHHHHHHHHHHHHHcCCCcEEE---------------EEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 27 SPDSLMAKINSDVEAGLIPLFL---------------CATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v---------------~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
|+..+.+.|.--++-|+..+.+ -........|+.++++++++-||++|+.|++|.+
T Consensus 48 ~~~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V 118 (475)
T 2z1k_A 48 TLWGVAEKLPYLLDLGVEAIYLNPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDGV 118 (475)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHhHHHHHcCCCEEEECCCcCCCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 5778888886555445432111 1122334468888999999999999999999986
No 258
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=49.95 E-value=47 Score=27.82 Aligned_cols=62 Identities=15% Similarity=0.065 Sum_probs=40.9
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEec--c-CCcccccCChHHHHHHHHHhCcEEEeeccccccc
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATI--G-TTAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSA 87 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~--~-~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~ 87 (310)
.+++++..++..-...+.....++.-. + ++..-...++..+..+.+.+++++++|..|+.+.
T Consensus 141 ~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 141 NTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp CCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCS
T ss_pred CCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCc
Confidence 488999999976555454333444411 2 2222223467888888888899999999998654
No 259
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=49.90 E-value=7 Score=35.94 Aligned_cols=28 Identities=29% Similarity=0.495 Sum_probs=24.8
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
...|+.++++++++-||++|+.|++|.+
T Consensus 92 ~~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (484)
T 2aaa_A 92 SNFGTADNLKSLSDALHARGMYLMVDVV 119 (484)
T ss_dssp TTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3457788899999999999999999986
No 260
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=49.84 E-value=5.1 Score=36.82 Aligned_cols=28 Identities=18% Similarity=0.226 Sum_probs=24.9
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+..|+.++++++++-||++|+.|++|.+
T Consensus 69 p~~Gt~~d~~~lv~~~h~~Gi~VilD~V 96 (471)
T 1jae_A 69 TRSGDESAFTDMTRRCNDAGVRIYVDAV 96 (471)
T ss_dssp ETTEEHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3457888899999999999999999986
No 261
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=49.51 E-value=7.5 Score=37.01 Aligned_cols=28 Identities=25% Similarity=0.146 Sum_probs=24.7
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+..|+.++++++++-||++|+.|++|.+
T Consensus 203 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 230 (599)
T 3bc9_A 203 TKYGTKGELENAIDALHNNDIKVYFDAV 230 (599)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3457778899999999999999999986
No 262
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=48.19 E-value=7.5 Score=36.86 Aligned_cols=57 Identities=23% Similarity=0.336 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEE--E-------------eccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLC--A-------------TIGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~--~-------------~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
|+..+.+.|.--++-|+..+.+. . .......|+.++++++++-||++|+.|++|.+.
T Consensus 174 ~~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 245 (588)
T 1j0h_A 174 DLQGIIDHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVF 245 (588)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCcCccccCccCccCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 77888888865544454321111 0 112334577888999999999999999999863
No 263
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=48.02 E-value=21 Score=30.75 Aligned_cols=58 Identities=10% Similarity=0.007 Sum_probs=37.6
Q ss_pred CCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh--CcEEEe
Q 046506 22 SSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF--GIWVHV 79 (310)
Q Consensus 22 ~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~--g~~l~v 79 (310)
.++.+|.+.+++.++...+.+..-.+++-+++...+=+.++-.++.+.+.+. .+++++
T Consensus 22 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpVia 81 (313)
T 3dz1_A 22 DDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIV 81 (313)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 3459999999999998887775543333344433333344555677766665 477776
No 264
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=47.64 E-value=7.3 Score=35.87 Aligned_cols=56 Identities=18% Similarity=0.177 Sum_probs=37.8
Q ss_pred CHHHHHHHHHHHHHcCCCcEEE---------------EEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 27 SPDSLMAKINSDVEAGLIPLFL---------------CATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v---------------~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
|+..+.+.|.--++-|+..+.+ -........|+.++++++++-||++|+.|++|.+
T Consensus 54 dl~gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V 124 (488)
T 2wc7_A 54 DLWGIMEDLDYIQNLGINAIYFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDGV 124 (488)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEESCCEEECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCCCCcCccccCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 5677777776555445431111 1112234457788899999999999999999986
No 265
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=47.45 E-value=8.9 Score=36.45 Aligned_cols=57 Identities=11% Similarity=0.065 Sum_probs=38.3
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEE--Ee--------c---------cCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLC--AT--------I---------GTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~--~~--------~---------~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
=|++.+.+.|.--++-|+..+.+. .. | .....|+.++++++++-||++|+.|++|.+
T Consensus 145 Gdl~gi~~~Ldyl~~LGv~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V 220 (601)
T 3edf_A 145 GDIRGTIDHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVV 220 (601)
T ss_dssp CCHHHHHHTHHHHHHTTCCEEEESCCEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccCCCCCCCCCCcCccccccccccCCCHHHHHHHHHHHHHcCCEEEEEEC
Confidence 467888888876555554321110 00 1 122347777899999999999999999987
No 266
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=47.41 E-value=7.1 Score=36.83 Aligned_cols=58 Identities=9% Similarity=0.096 Sum_probs=38.1
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEE----------------EeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLC----------------ATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~----------------~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
.=|+..+.+.|.--+.-|+..+.+. ........|+.++++++++-||++|+.|++|.+
T Consensus 41 ~Gdl~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V 114 (570)
T 1m53_A 41 IGDIRGIIEKLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMIDVV 114 (570)
T ss_dssp SCCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4567777777755444443321110 011223457788899999999999999999986
No 267
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=47.19 E-value=27 Score=29.70 Aligned_cols=57 Identities=14% Similarity=0.196 Sum_probs=35.8
Q ss_pred CcccCHHHHHHHHHHHHH-cCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 23 SYGLSPDSLMAKINSDVE-AGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~-~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
++.+|.+.+++.++...+ .+..-.+++-+.+...+=+.++-.++.+.+.+. .+++++
T Consensus 18 dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 78 (293)
T 1f6k_A 18 DGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIA 78 (293)
T ss_dssp TSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 459999999999998887 675543333444443333344455666666653 366653
No 268
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=47.05 E-value=8.9 Score=36.02 Aligned_cols=58 Identities=14% Similarity=0.102 Sum_probs=38.3
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEE--E--------------eccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLC--A--------------TIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~--~--------------~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
.=|+..+.+.|.--++-|+..+.+. . .......|+.++++++++.||++|+.|++|.+
T Consensus 28 ~Gdl~gi~~~Ldyl~~LGv~~I~L~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V 101 (557)
T 1zja_A 28 IGDFKGLTEKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLMVDVV 101 (557)
T ss_dssp SCCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCHHHHHHHHHHHHHcCCCEEEECCCccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4567888887755444443321110 0 11223457788899999999999999999986
No 269
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=46.49 E-value=28 Score=29.87 Aligned_cols=58 Identities=17% Similarity=0.072 Sum_probs=36.2
Q ss_pred CCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 22 SSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 22 ~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
.++.+|.+.+++.++...+.+..-.+++-+.+...+=+.++-.++.+.+.+. .+++++
T Consensus 29 ~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 29 GDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 3459999999999998887775433333333333333344455677766664 467775
No 270
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=46.31 E-value=7.5 Score=36.83 Aligned_cols=56 Identities=20% Similarity=0.264 Sum_probs=37.8
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEE--E-------------eccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLC--A-------------TIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~--~-------------~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
|+..+.+.|.--++-|+..+.+. . .......|+.++++++++-||++|+.|++|.+
T Consensus 171 ~~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD~V 241 (585)
T 1wzl_A 171 DLKGVIDRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAV 241 (585)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CHHHHHHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 67888888855444454321110 0 12233457788899999999999999999986
No 271
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=46.20 E-value=5.7 Score=35.86 Aligned_cols=28 Identities=32% Similarity=0.559 Sum_probs=24.9
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
...|+.++++++++-||++|+.+++|.+
T Consensus 69 ~~~G~~~d~~~lv~~~h~~Gi~VilD~V 96 (422)
T 1ua7_A 69 RYLGTEQEFKEMCAAAEEYGIKVIVDAV 96 (422)
T ss_dssp TTTEEHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3458888999999999999999999986
No 272
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=45.82 E-value=9 Score=36.01 Aligned_cols=28 Identities=7% Similarity=0.111 Sum_probs=24.6
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
...|+.++++++++-||++|+.|++|.+
T Consensus 73 ~~~Gt~~df~~lv~~~h~~Gi~VilD~V 100 (558)
T 1uok_A 73 NEFGTMEDWDELLHEMHERNMKLMMDLV 100 (558)
T ss_dssp GGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3457778899999999999999999986
No 273
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=45.65 E-value=9.7 Score=36.83 Aligned_cols=28 Identities=25% Similarity=0.227 Sum_probs=24.9
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
...|+.++++++++-||++|+.|++|.+
T Consensus 110 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 137 (686)
T 1d3c_A 110 PAYGTIADFQNLIAAAHAKNIKVIIDFA 137 (686)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3457788899999999999999999986
No 274
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=45.58 E-value=8.2 Score=36.53 Aligned_cols=56 Identities=21% Similarity=0.297 Sum_probs=38.0
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEe----------------ccCCcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCAT----------------IGTTAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~----------------~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
|+..+.+.|.--++-|+.. +-+.. ......|+.++++++++-||++|+.|++|.+.
T Consensus 170 d~~gi~~~LdyLk~LGvt~-I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 241 (583)
T 1ea9_C 170 DLQGVIDHLDHLSKLGVNA-VYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVF 241 (583)
T ss_dssp CHHHHHHTHHHHHHHTCSE-EEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCC
T ss_pred CHHHHHHhhHHHHHcCCCE-EEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 6778888886544445432 11111 11233467778999999999999999999863
No 275
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=45.25 E-value=9.8 Score=36.82 Aligned_cols=28 Identities=32% Similarity=0.255 Sum_probs=24.8
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
...|+.++++++++-||++|+.|++|.+
T Consensus 102 p~~Gt~~df~~Lv~~aH~~GikVilD~V 129 (686)
T 1qho_A 102 EHFGNWTTFDTLVNDAHQNGIKVIVDFV 129 (686)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 3457788899999999999999999986
No 276
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=45.13 E-value=9.8 Score=36.75 Aligned_cols=28 Identities=29% Similarity=0.331 Sum_probs=24.8
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
...|+.++++++++-||++|+.|++|.+
T Consensus 106 p~~Gt~~df~~Lv~~aH~~GIkVilD~V 133 (680)
T 1cyg_A 106 PFFGTLSDFQRLVDAAHAKGIKVIIDFA 133 (680)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3457788899999999999999999986
No 277
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=44.77 E-value=9.1 Score=35.93 Aligned_cols=58 Identities=17% Similarity=0.157 Sum_probs=38.4
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEE--EEe--------------ccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFL--CAT--------------IGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v--~~~--------------~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
.=|+..+.+.|.--++-|+..+.+ +.. ......|+.++++++++.||++|+.|++|.+
T Consensus 27 ~Gd~~gi~~~ldyl~~lGv~~i~l~Pi~~~~~~~~gY~~~dy~~id~~~Gt~~d~~~lv~~~h~~Gi~vilD~V 100 (555)
T 2ze0_A 27 IGDLRGIIEKLDYLVELGVDIVWICPIYRSPNADNGYDISDYYAIMDEFGTMDDFDELLAQAHRRGLKVILDLV 100 (555)
T ss_dssp SCCHHHHHHTHHHHHHHTCCEEEECCCEECCCTTTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 457788888876555545432111 011 1223357778899999999999999999986
No 278
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=44.29 E-value=31 Score=29.52 Aligned_cols=57 Identities=12% Similarity=0.231 Sum_probs=35.0
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
++.+|.+.+++.++...+.+..-.+++-+.+...+=+.++-.++.+.+.+. .+++++
T Consensus 26 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 85 (303)
T 2wkj_A 26 QQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIA 85 (303)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 459999999999998877765433333333333333334455566666653 467765
No 279
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=44.16 E-value=10 Score=36.43 Aligned_cols=56 Identities=21% Similarity=0.220 Sum_probs=38.2
Q ss_pred CHHHHHHHHHHHHHcCCC-----cEE----------EEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 27 SPDSLMAKINSDVEAGLI-----PLF----------LCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~-----~~~----------v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
|++.+.++|.--++-|+. |+. .-........|+.++++++++-||++|+.|++|.+
T Consensus 237 dl~Gi~~kLdYLk~LGvt~I~L~Pif~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~V 307 (645)
T 4aef_A 237 DLIGIKEKIDHLVNLGINAIYLTPIFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDGV 307 (645)
T ss_dssp CHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHhhHHHHHcCCCEEEECCCCCCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEEec
Confidence 667777777654444533 210 11112334568888899999999999999999986
No 280
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=43.94 E-value=34 Score=29.29 Aligned_cols=57 Identities=18% Similarity=0.077 Sum_probs=34.4
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
++.+|.+.+++.++...+.+..-.+++-+.+...+=+.++-.++.+.+.+. .+++++
T Consensus 31 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 90 (304)
T 3cpr_A 31 SGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIA 90 (304)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEe
Confidence 459999999999998877765433233333333333334455566666653 366663
No 281
>2llz_A Uncharacterized protein YJDK; RNAse, biofilm, unknown function; NMR {Escherichia coli}
Probab=43.61 E-value=27 Score=24.36 Aligned_cols=63 Identities=14% Similarity=-0.033 Sum_probs=36.5
Q ss_pred ceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCcEEEEEeEECC----EeEEEEEccCCCCCHHHH
Q 046506 215 FAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGKAYMTHAVLGG----IYAIRFAAGATLTEERHV 290 (310)
Q Consensus 215 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~----~~~iRis~~~~~~t~edi 290 (310)
.-+|+|++.+.. ..++.+ +...|.+.| +....++.+| -+.-.|.+.+. -+++||
T Consensus 11 ~YVVTf~y~e~~----------------Lt~~~e----L~~~lt~aG-F~ttl~D~~G~pHeLgtNsFgliS~-l~~~ev 68 (100)
T 2llz_A 11 TYVVSFDYPSSY----------------SSVFLR----LRSLMYDMN-FSSIVADEYGIPRQLNENSFAITTS-LAASEI 68 (100)
T ss_dssp CEEEEEECCGGG----------------HHHHHH----HHHHHHHTT-EESEEECSSSCEEECTTTEEEECCC-SCHHHH
T ss_pred EEEEEEEecccc----------------hHHHHH----HHHHHHhCC-ceeEeecCCCCceeccccceeeecc-CCHHHH
Confidence 457889998853 333344 444455555 4444333222 12224555653 789999
Q ss_pred HHHHHHHHH
Q 046506 291 MVAWTVVQE 299 (310)
Q Consensus 291 ~~li~~l~~ 299 (310)
+++...+.+
T Consensus 69 ~~La~~L~e 77 (100)
T 2llz_A 69 EDLIRLKCL 77 (100)
T ss_dssp HHHHHHGGG
T ss_pred HHHHHHHHH
Confidence 999987754
No 282
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=43.54 E-value=10 Score=36.22 Aligned_cols=27 Identities=22% Similarity=0.295 Sum_probs=23.7
Q ss_pred cccccCChHHHHHHHHHhCcEEEeecc
Q 046506 56 AITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 56 ~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
..|+.++++++++-||++|+.|++|.+
T Consensus 158 ~~Gt~~d~~~Lv~~ah~~GI~VilD~V 184 (628)
T 1g5a_A 158 ALGTIGDLREVIAALHEAGISAVVDFI 184 (628)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 346677799999999999999999986
No 283
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=43.52 E-value=29 Score=29.65 Aligned_cols=57 Identities=16% Similarity=0.170 Sum_probs=35.4
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
++.+|.+.+++.++...+.+..-..++-+.+...+=+.++-.++.+.+.+. .+++++
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 81 (297)
T 3flu_A 22 DGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA 81 (297)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 459999999999998877765433333333333333344455666666653 367766
No 284
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=43.50 E-value=9.3 Score=35.80 Aligned_cols=58 Identities=16% Similarity=0.158 Sum_probs=37.9
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEE--Ee--------------ccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLC--AT--------------IGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~--~~--------------~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
.=|+..+.+.|.--++-|+..+.+. .. ......|+.++++++++-||++|+.|++|.+
T Consensus 27 ~Gdl~gi~~~Ldyl~~LGv~~I~l~Pi~~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V 100 (543)
T 2zic_A 27 IGDLKGITSKLDYLQKLGVMAIWLSPVYDSPMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDLV 100 (543)
T ss_dssp SCCHHHHHHTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred ccCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3477888887765444454321110 00 1123357778899999999999999999986
No 285
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=43.26 E-value=13 Score=35.96 Aligned_cols=57 Identities=14% Similarity=0.163 Sum_probs=39.7
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEE---------------EEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFL---------------CATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v---------------~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
=|++.+.+.|.--++-|+..+.+ -........|+.++++++++-||++|+.|++|.+
T Consensus 262 Gdl~Gi~~kLdyLk~LGvt~IwL~Pi~~s~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V 333 (696)
T 4aee_A 262 GDLAGIMKHIDHLEDLGVETIYLTPIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDIT 333 (696)
T ss_dssp CCHHHHHTTHHHHHHHTCCEEEECCCEEESSSSCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCHHHHHHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEecc
Confidence 36788888887655545432111 1112234568888999999999999999999987
No 286
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=43.21 E-value=11 Score=36.38 Aligned_cols=28 Identities=21% Similarity=0.233 Sum_probs=24.8
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
...|+.++++++++-||++|+.+++|.+
T Consensus 111 p~~Gt~~dfk~Lv~~aH~~GikVilD~V 138 (683)
T 3bmv_A 111 PYFGSFTDFQNLINTAHAHNIKVIIDFA 138 (683)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 3457788899999999999999999986
No 287
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=42.90 E-value=28 Score=29.92 Aligned_cols=57 Identities=18% Similarity=0.072 Sum_probs=38.1
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
++.+|.+.+++.++...+.+..-.+++-+.+...+=+.++-.++.+.+.+. .+++++
T Consensus 23 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 82 (309)
T 3fkr_A 23 TGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIV 82 (309)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 359999999999998888776554444455544444445566677777664 356654
No 288
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=42.65 E-value=11 Score=35.60 Aligned_cols=58 Identities=10% Similarity=0.038 Sum_probs=38.2
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEE--EEe--------------ccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFL--CAT--------------IGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v--~~~--------------~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
.=|+..+.+.|.--+.-|+..+.+ +.. ......|+.++++++++.||++|+.|++|.+
T Consensus 36 ~Gdl~gi~~~Ldyl~~LGv~~i~l~Pi~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~V 109 (589)
T 3aj7_A 36 WGDMKGIASKLEYIKELGADAIWISPFYDSPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDLV 109 (589)
T ss_dssp SCCHHHHHHTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCcCcccccccccccCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 447788888776544445432111 011 1123357778899999999999999999987
No 289
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=42.24 E-value=28 Score=29.22 Aligned_cols=57 Identities=25% Similarity=0.233 Sum_probs=36.5
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEE-EEeccCC---------------cccccCChHHHHHHHHHhCcEEEeec
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFL-CATIGTT---------------AITAVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v-~~~~~~~---------------~~G~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
..+.+.+++.|+.-++.+...+-+ +...+.. .......++++.++|+++|+.+++|-
T Consensus 38 ~~~~~~~~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~Gi~vil~~ 110 (351)
T 3vup_A 38 QRNKNRIEPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYNILVFPCL 110 (351)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCHHHHHHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 457788888888877767544222 1111111 01223447899999999999998885
No 290
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=42.19 E-value=10 Score=36.33 Aligned_cols=26 Identities=23% Similarity=0.273 Sum_probs=23.5
Q ss_pred ccccCChHHHHHHHHHhCcEEEeecc
Q 046506 57 ITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 57 ~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
.|+.++++++++-||++|+.|++|.+
T Consensus 152 ~Gt~~df~~Lv~~aH~~GI~VilD~V 177 (644)
T 3czg_A 152 LGSNDDLVALTSRLREAGISLCADFV 177 (644)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 46677899999999999999999986
No 291
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=41.47 E-value=12 Score=36.36 Aligned_cols=28 Identities=21% Similarity=0.376 Sum_probs=24.5
Q ss_pred cccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 56 AITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 56 ~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
..|+.++++++++-||++|+.|++|.+.
T Consensus 316 ~~Gt~edfk~LV~~aH~~GI~VilD~V~ 343 (695)
T 3zss_A 316 ALGTLDDFDHFVTEAGKLGLEIALDFAL 343 (695)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEeec
Confidence 3466788999999999999999999875
No 292
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=41.17 E-value=35 Score=29.19 Aligned_cols=56 Identities=11% Similarity=0.074 Sum_probs=33.2
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEE
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVH 78 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~ 78 (310)
++.+|.+.+++.++...+.+..-.+++-+.+...+=+.++-.++.+.+.+. .++++
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVi 85 (301)
T 1xky_A 27 NGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVI 85 (301)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEE
Confidence 459999999999998877665432233333333322334445566666653 35655
No 293
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=41.16 E-value=32 Score=30.65 Aligned_cols=60 Identities=23% Similarity=0.222 Sum_probs=36.4
Q ss_pred CHHHHHHHHHHHHHcCCCcEEEEEeccC-CcccccCChHHHHHHHHHhCcEEEeecccccc
Q 046506 27 SPDSLMAKINSDVEAGLIPLFLCATIGT-TAITAVDTLKPLCDVAKQFGIWVHVDAAYAGS 86 (310)
Q Consensus 27 d~~~Le~~i~~~~~~~~~~~~v~~~~~~-~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~ 86 (310)
+.++.++-|....+.|...+..++.... +..-.+..+++|.+.|+++|+-+++|-+....
T Consensus 39 ~~~~~~~Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp~~~ 99 (385)
T 1x7f_A 39 TKEKDMAYISAAARHGFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDNNMEVILDVAPAVF 99 (385)
T ss_dssp CHHHHHHHHHHHHTTTEEEEEEEECCC--------HHHHHHHHHHHHTTCEEEEEECTTCC
T ss_pred CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHH
Confidence 4566667787776656443333332221 11233566899999999999999999775433
No 294
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=40.94 E-value=39 Score=28.07 Aligned_cols=57 Identities=12% Similarity=0.210 Sum_probs=40.7
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
.++.+++++.|......-...+.+.--.++-.+.....++.+.+.++++| +++||.-
T Consensus 79 ~~s~~ei~~~l~~al~~vP~a~GvnNHmGS~~T~~~~~m~~vm~~l~~~g-L~fvDS~ 135 (245)
T 2nly_A 79 NLSVGEVKSRVRKAFDDIPYAVGLNNHMGSKIVENEKIMRAILEVVKEKN-AFIIDSG 135 (245)
T ss_dssp TCCHHHHHHHHHHHHHHSTTCCEEEEEECTTGGGCHHHHHHHHHHHHHTT-CEEEECC
T ss_pred CCCHHHHHHHHHHHHHHCCCcEEEecccccchhcCHHHHHHHHHHHHHCC-CEEEcCC
Confidence 46889999999877664222334555566666777777999999999999 5666643
No 295
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=40.67 E-value=11 Score=36.03 Aligned_cols=27 Identities=22% Similarity=0.254 Sum_probs=24.0
Q ss_pred cccccCChHHHHHHHHHhCcEEEeecc
Q 046506 56 AITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 56 ~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
..|+.++++++++-||++|+.|++|.+
T Consensus 200 ~~Gt~~~~~~lv~~~H~~Gi~VilD~V 226 (617)
T 1m7x_A 200 RFGTRDDFRYFIDAAHAAGLNVILDWV 226 (617)
T ss_dssp GGSCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 347778899999999999999999976
No 296
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=39.15 E-value=12 Score=35.66 Aligned_cols=27 Identities=26% Similarity=0.401 Sum_probs=23.9
Q ss_pred cccccCChHHHHHHHHHhCcEEEeecc
Q 046506 56 AITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 56 ~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
..|+.++++++++-||++|+.|++|.+
T Consensus 188 ~~Gt~~d~~~lv~~~H~~Gi~VilD~V 214 (602)
T 2bhu_A 188 PYGRPEDLMALVDAAHRLGLGVFLDVV 214 (602)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 347788899999999999999999975
No 297
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=39.03 E-value=11 Score=35.57 Aligned_cols=29 Identities=24% Similarity=0.384 Sum_probs=24.8
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+..|+.++++++++-||++|+.+++|.+.
T Consensus 162 ~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~ 190 (558)
T 3vgf_A 162 NSYGGPEGFRKLVDEAHKKGLGVILDVVY 190 (558)
T ss_dssp GGGTHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCHHHHHHHHHHHHHcCCEEEEEEee
Confidence 34577788999999999999999999863
No 298
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=39.03 E-value=55 Score=23.76 Aligned_cols=49 Identities=8% Similarity=0.176 Sum_probs=29.7
Q ss_pred cCHHHHHHHHHHHHHcC-----CCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEE
Q 046506 26 LSPDSLMAKINSDVEAG-----LIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVH 78 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~-----~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~ 78 (310)
.|++++.+.|++..+.. ..|+++-+.... ...++.+|.++|+++|+.++
T Consensus 25 ~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~----~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 25 AEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLE----SPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECC----SSCCHHHHHHHHHTTTCEEE
T ss_pred CCHHHHHHHHHHHHHhChHhhCCCcEEEEccccC----ChHHHHHHHHHHHHcCCEEE
Confidence 45667777666544422 234333332222 23579999999999998764
No 299
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=38.89 E-value=30 Score=29.84 Aligned_cols=57 Identities=19% Similarity=0.120 Sum_probs=35.8
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
++.+|.+.+++.++...+.+..-.+++-+.+...+=+.++-+++.+.+.+. .+++++
T Consensus 38 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 97 (314)
T 3qze_A 38 QGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIA 97 (314)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 459999999999998777665433333344433333344555666666654 367765
No 300
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=38.88 E-value=54 Score=28.75 Aligned_cols=61 Identities=13% Similarity=0.142 Sum_probs=41.2
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccC----CcccccCChHHHHHHHHHhCcEEEeeccccccc
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGT----TAITAVDTLKPLCDVAKQFGIWVHVDAAYAGSA 87 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~----~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~~~~ 87 (310)
.++++++.++..-...+....++ +..|. +.+-...++..|..+.+.+++++++|..|+.+.
T Consensus 224 ~tl~ei~~Ave~i~~~GN~~viL-ceRG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G~ 288 (350)
T 1vr6_A 224 NTIEEFLLSAEYIANSGNTKIIL-CERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGGR 288 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCCCEEE-EECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHCS
T ss_pred CCHHHHHHHHHHHHHCCCCeEEE-EeCCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCcc
Confidence 58899999988766555434344 43333 221223568888888888899999999998663
No 301
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=38.13 E-value=30 Score=29.82 Aligned_cols=58 Identities=12% Similarity=0.059 Sum_probs=37.9
Q ss_pred CCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 22 SSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 22 ~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
.++.+|.+.+++.++...+.+..-.+++.+.+...+=+.++-.++.+.+.+. .+++++
T Consensus 21 ~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpVia 81 (311)
T 3h5d_A 21 EDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIA 81 (311)
T ss_dssp TTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3459999999999998887775544444444444433445556677777765 366665
No 302
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=37.73 E-value=23 Score=30.40 Aligned_cols=57 Identities=5% Similarity=-0.041 Sum_probs=37.0
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
++.+|.+.+++.++...+.+..-.+++-+++...+=+.++-.++.+.+.+. .+++++
T Consensus 29 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 88 (307)
T 3s5o_A 29 TAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLA 88 (307)
T ss_dssp TSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEE
Confidence 459999999999998776665433334444444433445556677777774 466665
No 303
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=37.42 E-value=68 Score=28.53 Aligned_cols=61 Identities=13% Similarity=0.061 Sum_probs=40.9
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCccc---ccCChHHHHHHHHHhCcEEEeecccccc
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAIT---AVDTLKPLCDVAKQFGIWVHVDAAYAGS 86 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G---~~~pl~~I~~l~~~~g~~l~vD~a~~~~ 86 (310)
.++++++.++..-...|....+++--..++... .-.++..|..+.+.+++++++|-+|+.|
T Consensus 260 ~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G 323 (385)
T 3nvt_A 260 ATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTG 323 (385)
T ss_dssp CCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHC
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCC
Confidence 788999999887655554343333221222222 1246888998888899999999999765
No 304
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=37.04 E-value=16 Score=34.84 Aligned_cols=28 Identities=29% Similarity=0.444 Sum_probs=24.5
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+..|+.++++++++-||++|+.|++|.+
T Consensus 197 ~~~G~~~~~~~lv~~~H~~Gi~VilD~V 224 (618)
T 3m07_A 197 SAYGTPDDFKAFIDAAHGYGLSVVLDIV 224 (618)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCcCCHHHHHHHHHHHHHCCCEEEEeec
Confidence 3457778899999999999999999986
No 305
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=36.24 E-value=26 Score=29.99 Aligned_cols=57 Identities=16% Similarity=0.184 Sum_probs=35.0
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh----CcEEEe
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF----GIWVHV 79 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~----g~~l~v 79 (310)
++.+|.+.+++.++...+.+..-..++-+++...+=+.++-+++.+.+.+. .+++++
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia 82 (301)
T 3m5v_A 22 NGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLA 82 (301)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 358999999999998877765433222333333333334455566666654 477776
No 306
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=35.84 E-value=27 Score=30.13 Aligned_cols=58 Identities=16% Similarity=0.138 Sum_probs=36.4
Q ss_pred CCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 22 SSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 22 ~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
.++.+|.+.+++.++...+.+..-.+++-+.+...+=+.++-.++.+.+.+. .+++++
T Consensus 38 ~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 98 (315)
T 3na8_A 38 ADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIV 98 (315)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 3459999999999998887775533333344433333344555677766663 366665
No 307
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=35.59 E-value=16 Score=35.53 Aligned_cols=28 Identities=32% Similarity=0.362 Sum_probs=24.7
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+..|+.++++++++-||++|+.|++|.+
T Consensus 307 ~~yGt~~dfk~lV~~~H~~GI~VilD~V 334 (722)
T 3k1d_A 307 SRFGTPDDFRALVDALHQAGIGVIVDWV 334 (722)
T ss_dssp GGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEEEE
Confidence 3457778899999999999999999986
No 308
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A*
Probab=35.52 E-value=21 Score=34.31 Aligned_cols=30 Identities=20% Similarity=0.262 Sum_probs=26.2
Q ss_pred cCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 53 GTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 53 ~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
..+..|+.++++++++-||++|+.|++|.+
T Consensus 153 i~~~~Gt~~d~~~lv~~~h~~Gi~Vi~D~V 182 (655)
T 3ucq_A 153 VRPDLGTMDDLSALARALRGRGISLVLDLV 182 (655)
T ss_dssp ECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEee
Confidence 345568888999999999999999999986
No 309
>4hti_A Receptor-type tyrosine-protein phosphatase N2; phogrin, IA-2BETA, protein-tyrosine phosphatase, transmembra protein, diabetes, autoimmunity; 1.95A {Homo sapiens} PDB: 4htj_A
Probab=35.16 E-value=1.1e+02 Score=21.32 Aligned_cols=59 Identities=15% Similarity=0.172 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 046506 245 RINEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEA 303 (310)
Q Consensus 245 ~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~ 303 (310)
+-.++-..+.+.|.-.-..+....+.+..-.+|+.......|-+||...+..++.-+++
T Consensus 25 ~G~~l~~~la~~l~l~~~~F~~isV~g~aVTFrV~~N~~n~taadVA~~a~~~K~~Le~ 83 (99)
T 4hti_A 25 EGRRLVEDVARLLQVPSSAFADVEVLGPAVTFKVSANVQNVTTEDVEKATVDNKDKLEE 83 (99)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEEETTEEEEEECCCTTCCCHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHhCCchhheeeeeecCceEEEEeccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 33445556666554443457788888889999999777778899999999888876654
No 310
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=35.09 E-value=93 Score=26.22 Aligned_cols=63 Identities=14% Similarity=0.027 Sum_probs=40.7
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCccc---ccCChHHHHHHHHHhCcEEEeeccccccc
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAIT---AVDTLKPLCDVAKQFGIWVHVDAAYAGSA 87 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G---~~~pl~~I~~l~~~~g~~l~vD~a~~~~~ 87 (310)
..++++++.++..-...+....+++.-..++..+ ...++..|..+.+.+++++++|..|+.+.
T Consensus 155 ~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~lpVi~dssH~~g~ 220 (276)
T 1vs1_A 155 GNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATHLPVIVDPSHPAGR 220 (276)
T ss_dssp TCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHBSSCEEECCHHHHCS
T ss_pred CCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHhCCCEEEeCCCCCCc
Confidence 3588999999987665554332332212223222 23457788888777899999999998653
No 311
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=35.06 E-value=42 Score=29.17 Aligned_cols=57 Identities=9% Similarity=-0.022 Sum_probs=34.6
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
++.+|.+.+++.++...+.+....+++-+.+...+=+.++-.++.+.+.+. .+++++
T Consensus 49 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 108 (332)
T 2r8w_A 49 AGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMA 108 (332)
T ss_dssp TCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 459999999999998777665433333333333333334455566666653 367765
No 312
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=34.41 E-value=78 Score=25.96 Aligned_cols=50 Identities=16% Similarity=0.106 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHcCCCcEEEEEeccCCc----------ccccCChHHHHHHHHHhCcEEE
Q 046506 29 DSLMAKINSDVEAGLIPLFLCATIGTTA----------ITAVDTLKPLCDVAKQFGIWVH 78 (310)
Q Consensus 29 ~~Le~~i~~~~~~~~~~~~v~~~~~~~~----------~G~~~pl~~I~~l~~~~g~~l~ 78 (310)
-+-|..++=..-.+..|..|++...+-. .|......++.++|++||+.++
T Consensus 152 GHTEAaVDLarLAGl~PagVicEi~~~~~~~~~~~~~~dG~mar~~~l~~fA~~h~L~ii 211 (233)
T 1k4i_A 152 GHTEAGVELCRLAGKRPVAVISEIVDDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVC 211 (233)
T ss_dssp SHHHHHHHHHHHTTCCSBEEEEEBEECCEECTTSSCEESCEECCHHHHHHHHHHTTCEEE
T ss_pred ChHHHHHHHHHHcCCCceEEEEEeCCCcccccccccCCCCCcCCHHHHHHHHHHcCCcEE
Confidence 3445555544445777888888766431 6899999999999999999875
No 313
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=34.14 E-value=18 Score=35.48 Aligned_cols=29 Identities=28% Similarity=0.339 Sum_probs=25.1
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+..|+.++++++++-||++|+.|++|.+.
T Consensus 245 ~~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 273 (755)
T 3aml_A 245 SRSGTPEDLKYLVDKAHSLGLRVLMDVVH 273 (755)
T ss_dssp GGGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 34577888999999999999999999863
No 314
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=33.85 E-value=56 Score=28.78 Aligned_cols=58 Identities=14% Similarity=0.082 Sum_probs=35.0
Q ss_pred CCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 22 SSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 22 ~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
.++.+|.+.+++.++...+.+..-.+++-+++...+=+.++-.++.+.+.+. .+++++
T Consensus 73 ~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 133 (360)
T 4dpp_A 73 PDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIG 133 (360)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 3459999999999998877775433333333333333334444566655553 367775
No 315
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=33.59 E-value=63 Score=27.05 Aligned_cols=55 Identities=9% Similarity=0.070 Sum_probs=39.0
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeec
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDA 81 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~ 81 (310)
++.+++++.|......-...+.+.--.++-.+.....++.+.+.++++|..++ |.
T Consensus 107 ~s~~ei~~~l~~al~~vP~a~GvnNHmGS~~T~~~~~M~~vm~~L~~~gL~Fl-DS 161 (261)
T 2qv5_A 107 DPAKVNIDRLHRSMAKITNYTGVMNYLGGRFLAEQSALEPVMRDIGKRGLLFL-DD 161 (261)
T ss_dssp SCHHHHHHHHHHHHTTCCCCSEEEEEECTTGGGCHHHHHHHHHHHHHTTCEEE-EC
T ss_pred CCHHHHHHHHHHHHHHCCCcEEEecccccchhcCHHHHHHHHHHHHHCCCEEE-cC
Confidence 78999999998876542222345555566666666779999999999986554 53
No 316
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=33.59 E-value=47 Score=29.04 Aligned_cols=56 Identities=16% Similarity=0.167 Sum_probs=32.8
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEE
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVH 78 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~ 78 (310)
++.+|.+.+++.++...+.+....+++.+.+...+=+.++-.++.+.+....++++
T Consensus 41 dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpVi 96 (344)
T 2hmc_A 41 DRTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVI 96 (344)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEE
Confidence 45999999999999888777554333344443333333344455555222345555
No 317
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=33.49 E-value=46 Score=29.05 Aligned_cols=57 Identities=19% Similarity=0.186 Sum_probs=35.2
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
++.+|.+.+++.++...+.+..-.+++-+.+...+=+.++-.++.+.+.+. .+++++
T Consensus 46 dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 105 (343)
T 2v9d_A 46 DGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLI 105 (343)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 359999999999998887775543333344433333344455666666653 356653
No 318
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=33.23 E-value=36 Score=28.94 Aligned_cols=51 Identities=12% Similarity=0.072 Sum_probs=31.8
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF 73 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~ 73 (310)
++.+|.+.+++.++...+.+..-..++-+.+...+=+.++-.++.+.+.+.
T Consensus 18 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~ 68 (294)
T 3b4u_A 18 DGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAA 68 (294)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 459999999999998887765433333333333333334455677766664
No 319
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=33.23 E-value=31 Score=29.80 Aligned_cols=57 Identities=9% Similarity=0.110 Sum_probs=35.1
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
++.+|.+.+++.++...+.+..-.+++-+.+...+=+.++-.++.+.+.+. .+++++
T Consensus 37 dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 96 (315)
T 3si9_A 37 NGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVA 96 (315)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 459999999999998877775433333333333333334455566666664 366665
No 320
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1
Probab=33.12 E-value=23 Score=34.45 Aligned_cols=30 Identities=13% Similarity=0.190 Sum_probs=25.8
Q ss_pred cCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 53 GTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 53 ~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
.+...|+.++++++++-||++|+.+++|.+
T Consensus 58 Idp~lGt~edfk~LV~aaH~~GIkVIlDvV 87 (720)
T 1iv8_A 58 INDELGGEKEYRRLIETAHTIGLGIIQDIV 87 (720)
T ss_dssp ECTTTTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 344567788899999999999999999986
No 321
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=31.88 E-value=57 Score=28.90 Aligned_cols=57 Identities=18% Similarity=0.122 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHcCCCcEEEEEeccC-CcccccCChHHHHHHHHHhCcEEEeecccc
Q 046506 28 PDSLMAKINSDVEAGLIPLFLCATIGT-TAITAVDTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 28 ~~~Le~~i~~~~~~~~~~~~v~~~~~~-~~~G~~~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
.++.++-|....+.|...+..++..+. ...-.+..+++|.+.|+++|+-+++|-+..
T Consensus 16 ~~~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIsp~ 73 (372)
T 2p0o_A 16 TNDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDISGE 73 (372)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHHTCEEEEEECHH
T ss_pred HHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHH
Confidence 356667888777777654333333222 112234668899999999999999997643
No 322
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A*
Probab=31.79 E-value=20 Score=34.54 Aligned_cols=57 Identities=12% Similarity=0.085 Sum_probs=39.3
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEe----------------ccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCAT----------------IGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~----------------~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
.=|+..+.+.|.--..-|+.. +-+.. ......|+.++++++++-||++|+.+++|.+
T Consensus 56 ~G~~~g~~~~l~yl~~lGv~~-i~l~Pi~~~~~~~gY~~~dy~~i~~~~Gt~~d~~~lv~~~h~~gi~vi~D~V 128 (669)
T 3k8k_A 56 YGDLNGVTQKLDYLNQLGVKA-LWLSPIHPCMSYHGYDVTDYTKVNPQLGTESDFDRLVTEAHNRGIKIYLDYV 128 (669)
T ss_dssp SCCHHHHHTTHHHHHTTTCSE-EEECCCSSBSSTTCCSBSCTTSCCTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CcCHHHHHHHHHHHHHcCCCE-EEecccccCCCCCCCCcccccccccccCCHHHHHHHHHHHHHcCCEEEEEEC
Confidence 457888888887554444432 12111 1223457778899999999999999999986
No 323
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=31.66 E-value=16 Score=34.93 Aligned_cols=56 Identities=13% Similarity=0.090 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHHHH-cCCCcEEEEE----------------eccCCcccccCChHHHHHHHHHhC--c--EEEeeccc
Q 046506 27 SPDSLMAKINSDVE-AGLIPLFLCA----------------TIGTTAITAVDTLKPLCDVAKQFG--I--WVHVDAAY 83 (310)
Q Consensus 27 d~~~Le~~i~~~~~-~~~~~~~v~~----------------~~~~~~~G~~~pl~~I~~l~~~~g--~--~l~vD~a~ 83 (310)
|++.+.+.|.--++ -|+.. +-+. .......|+.++++++++-||++| + .|++|.+.
T Consensus 189 ~~~gi~~~LdyLk~~LGvt~-I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~LV~~~H~~G~~I~~~VIlD~V~ 265 (637)
T 1ji1_A 189 DLAGIDQKLGYIKKTLGANI-LYLNPIFKAPTNHKYDTQDYMAVDPAFGDNSTLQTLINDIHSTANGPKGYLILDGVF 265 (637)
T ss_dssp CHHHHHHTHHHHHTTTCCCE-EEESCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHCSSSSSCCEEEEEECC
T ss_pred CHHHHHHhHHHHHhccCCCE-EEECCCccCCCCCCcCccchhhhccccCCHHHHHHHHHHHHhCCCCccceEEEEECc
Confidence 78888888854444 35432 1111 122334577888999999999999 9 99999863
No 324
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A*
Probab=31.43 E-value=20 Score=35.53 Aligned_cols=29 Identities=21% Similarity=0.087 Sum_probs=25.3
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeeccc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+..|+.++++++++-||++|+.+++|-+.
T Consensus 687 ~~~Gt~~df~~lv~~~H~~GI~VilD~V~ 715 (844)
T 3aie_A 687 NKYGTADDLVKAIKALHSKGIKVMADWVP 715 (844)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 45677888999999999999999999763
No 325
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=30.84 E-value=37 Score=28.87 Aligned_cols=56 Identities=20% Similarity=0.148 Sum_probs=33.2
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEE
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVH 78 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~ 78 (310)
++.+|.+.+++.++...+.+.....++-+.+...+=+.++-.++.+.+.+. .++++
T Consensus 16 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi 74 (292)
T 2ojp_A 16 KGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVI 74 (292)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 459999999999998777665432233333333333334455566666653 35655
No 326
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=30.63 E-value=33 Score=29.66 Aligned_cols=57 Identities=14% Similarity=0.047 Sum_probs=37.2
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
++.+|.+.+++.++...+.+..-.+++-+++...+=+.++-.++.+.+.+. .+++++
T Consensus 26 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 85 (318)
T 3qfe_A 26 TDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMA 85 (318)
T ss_dssp TTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 459999999999998877665543344444444434445555677777664 367765
No 327
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=30.34 E-value=38 Score=28.75 Aligned_cols=57 Identities=14% Similarity=0.141 Sum_probs=34.5
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
++.+|.+.+++.++...+.+..-..++-+.+...+=+.++-.++.+.+.+. .+++++
T Consensus 16 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (291)
T 3tak_A 16 DGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIA 75 (291)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 459999999999998777665433233333333322334455566666653 366765
No 328
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=30.15 E-value=14 Score=19.72 Aligned_cols=22 Identities=32% Similarity=0.237 Sum_probs=17.1
Q ss_pred cccccCChHHHHHHHHHhCcEE
Q 046506 56 AITAVDTLKPLCDVAKQFGIWV 77 (310)
Q Consensus 56 ~~G~~~pl~~I~~l~~~~g~~l 77 (310)
..|+..+++++.+-+++.|+.+
T Consensus 10 vggtpeelkklkeeakkanirv 31 (36)
T 2ki0_A 10 VGGTPEELKKLKEEAKKANIRV 31 (36)
T ss_dssp BCCCHHHHHHHHHHHHHHCCCC
T ss_pred ecCCHHHHHHHHHHHHhccEEE
Confidence 4566778889999999888764
No 329
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=30.03 E-value=39 Score=28.71 Aligned_cols=51 Identities=12% Similarity=0.121 Sum_probs=31.0
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF 73 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~ 73 (310)
++.+|.+.+++.++...+.+..-.+++-+++...+=+.++-.++.+.+.+.
T Consensus 14 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~ 64 (293)
T 1w3i_A 14 DNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDV 64 (293)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 459999999999998877665432222333333323334455667766664
No 330
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=29.96 E-value=80 Score=26.81 Aligned_cols=57 Identities=16% Similarity=0.066 Sum_probs=35.7
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCccccc---CChHHHHHHHHHh-CcEEEeecccc
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAV---DTLKPLCDVAKQF-GIWVHVDAAYA 84 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~---~pl~~I~~l~~~~-g~~l~vD~a~~ 84 (310)
.++++++.++..-...+... |++.+..+..+.- .++..|..+.+.+ |+++.+|..|+
T Consensus 145 ~t~~ei~~ave~i~~~Gn~~--i~L~erg~~y~~~~~~vdl~~i~~lk~~~~~~pV~~D~sHs 205 (285)
T 3sz8_A 145 MSPTQLKHVVSKCGEVGNDR--VMLCERGSSFGYDNLVVDMLGFRQMAETTGGCPVIFDVTHS 205 (285)
T ss_dssp SCGGGTHHHHHHHHHTTCCC--EEEEECCEECSSSCEECCTTHHHHHHHHTTSCCEEEETTTT
T ss_pred CCHHHHHHHHHHHHHcCCCc--EEEEeCCCCCCCCcCccCHHHHHHHHHhCCCCCEEEeCCCc
Confidence 57777777776654444333 2233333223432 3688888887777 79999999986
No 331
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=29.64 E-value=35 Score=28.93 Aligned_cols=51 Identities=16% Similarity=0.184 Sum_probs=30.9
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF 73 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~ 73 (310)
++.+|.+.+++.++...+.+..-..++-+++...+=+.++-.++.+.+.+.
T Consensus 14 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~ 64 (288)
T 2nuw_A 14 QGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDV 64 (288)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 459999999999998877665432233333333333334455566666664
No 332
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=29.41 E-value=1.8e+02 Score=25.11 Aligned_cols=56 Identities=5% Similarity=-0.100 Sum_probs=36.2
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccc------cCChH----HHHHHHHHhCcEEEee
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITA------VDTLK----PLCDVAKQFGIWVHVD 80 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~------~~pl~----~I~~l~~~~g~~l~vD 80 (310)
.++++++.+.++...+....+.+|++.+...+.+. ...+. .|..+|+++|+++++=
T Consensus 137 ~~si~~i~~~ir~l~~~~gg~~lIVIDyLqlm~~~~~~~~r~~ei~~isr~LK~lAkel~vpVi~l 202 (338)
T 4a1f_A 137 YVRIEQIRLQLRKLKSQHKELGIAFIDYLQLMSGSKATKERHEQIAEISRELKTLARELEIPIIAL 202 (338)
T ss_dssp TCCHHHHHHHHHHHHHHCTTEEEEEEEEEECCCTHHHHHHCCCCHHHHHHHHHHHHHHHTSCEEEE
T ss_pred CCcHHHHHHHHHHHHHhcCCCCEEEEechHHhcCCCCCCChHHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 47888998888765544213557777766655432 23444 4566888999888754
No 333
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=29.22 E-value=31 Score=29.74 Aligned_cols=57 Identities=9% Similarity=0.107 Sum_probs=33.6
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
++.+|.+.+++.++...+.+..-.+++-+++...+=+.++-.++.+.+.+. .+++++
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpVia 86 (316)
T 3e96_A 27 DGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVA 86 (316)
T ss_dssp TCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 459999999999998877664432222333333333334445566666654 366654
No 334
>3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str}
Probab=28.96 E-value=28 Score=33.59 Aligned_cols=31 Identities=19% Similarity=0.134 Sum_probs=26.8
Q ss_pred ccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 52 IGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 52 ~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
...+..|+.++++++++-||++|+.+++|.+
T Consensus 55 ~vdp~lGt~edfk~LV~~aH~~GI~VilDvV 85 (704)
T 3hje_A 55 TINDELGGEEEYIRLIDEAKSKGLGIIQDIV 85 (704)
T ss_dssp EECGGGTHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred CcCccCCCHHHHHHHHHHHHHCCCEEEEeec
Confidence 4455668888899999999999999999986
No 335
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=28.56 E-value=32 Score=23.30 Aligned_cols=20 Identities=20% Similarity=0.172 Sum_probs=17.4
Q ss_pred hHHHHHHHHHhCcEEEeecc
Q 046506 63 LKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 63 l~~I~~l~~~~g~~l~vD~a 82 (310)
-.+|.++|+++|++++-|-.
T Consensus 29 A~~I~~~A~e~~VPi~e~~~ 48 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIP 48 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 46799999999999998864
No 336
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=28.42 E-value=37 Score=29.26 Aligned_cols=57 Identities=9% Similarity=0.076 Sum_probs=34.0
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
++.+|.+.+++.++...+.+..-.+++-+.+...+=+.++-.++.+.+.+. .+++++
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpVia 86 (314)
T 3d0c_A 27 TREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVA 86 (314)
T ss_dssp TCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEe
Confidence 459999999999998877664432222233333333334455566666653 367765
No 337
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=28.19 E-value=1.1e+02 Score=24.77 Aligned_cols=55 Identities=16% Similarity=0.131 Sum_probs=38.9
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEE
Q 046506 12 NFRAIKTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVH 78 (310)
Q Consensus 12 ~v~~v~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~ 78 (310)
.+..+|+. +.+.+++++..+.++.-. +..++.+|-.+ .+.+++.+.+++.|+.+.
T Consensus 176 Dv~il~~~--~~~h~~~~ea~~~~~~l~-----~k~vip~H~~~-----~~~~~~~~~l~~~gi~v~ 230 (235)
T 3kl7_A 176 DIAFLPVN--QPYTMTVSQAAKAARMFS-----PKILYPYHYGD-----TKIGELKDALKDSGIDVR 230 (235)
T ss_dssp SEEEEECC--TTTSCCHHHHHHHHHHHC-----CSEEEEESCTT-----CCTTHHHHHTTTSCCEEC
T ss_pred CEEEECCC--CCcccCHHHHHHHHHHcC-----CCEEEEEcCCC-----CCHHHHHHHHhhCCCEEE
Confidence 47788886 356889888888776532 44677777766 467788888777777654
No 338
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=27.64 E-value=52 Score=27.90 Aligned_cols=57 Identities=16% Similarity=0.138 Sum_probs=34.6
Q ss_pred CCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEE
Q 046506 21 SSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVH 78 (310)
Q Consensus 21 ~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~ 78 (310)
+.++ +|.+.+++.++...+.+..-..++-+.+...+=+.++-.++.+.+.+. .++++
T Consensus 15 ~~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi 74 (291)
T 3a5f_A 15 TNTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVI 74 (291)
T ss_dssp CSSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEE
T ss_pred CCCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 3357 999999999998877765433333343333333334455666666653 35655
No 339
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A*
Probab=26.99 E-value=28 Score=35.41 Aligned_cols=28 Identities=14% Similarity=0.113 Sum_probs=24.8
Q ss_pred CcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 55 TAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 55 ~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+..|+.++++++++.||++|+.+++|-+
T Consensus 907 ~~yGt~edfk~LV~alH~~GI~VIlDvV 934 (1108)
T 3ttq_A 907 TKYGTDGDLRATIQALHHANMQVMADVV 934 (1108)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 4457778899999999999999999976
No 340
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila}
Probab=26.22 E-value=1.5e+02 Score=24.68 Aligned_cols=23 Identities=26% Similarity=0.326 Sum_probs=19.3
Q ss_pred cCChHHHHHHHHHhCcEEEeecc
Q 046506 60 VDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 60 ~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
...++++.+.|+++|+.++++-.
T Consensus 100 ~~~~d~~~~~a~~~gi~v~~~~~ 122 (387)
T 4awe_A 100 VSPFDKVVDSATKTGIKLIVALT 122 (387)
T ss_dssp CGGGHHHHHHHHHHTCEEEEECC
T ss_pred hhhHHHHHHHHHHcCCEEEEeec
Confidence 34588999999999999998853
No 341
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=26.04 E-value=28 Score=34.02 Aligned_cols=24 Identities=21% Similarity=0.369 Sum_probs=21.5
Q ss_pred cCChHHHHHHHHHhCcEEEeeccc
Q 046506 60 VDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 60 ~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
.++++++++-||++|+.|++|.+.
T Consensus 272 ~~efk~lV~~~H~~Gi~VilDvV~ 295 (750)
T 1bf2_A 272 TAEFQAMVQAFHNAGIKVYMDVVY 295 (750)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEec
Confidence 678999999999999999999863
No 342
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=25.97 E-value=25 Score=34.13 Aligned_cols=23 Identities=26% Similarity=0.319 Sum_probs=21.0
Q ss_pred cCChHHHHHHHHHhCcEEEeecc
Q 046506 60 VDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 60 ~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
.++++++++-||++|+.|++|.+
T Consensus 266 ~~dfk~lv~~~H~~Gi~VilDvV 288 (718)
T 2vr5_A 266 VLSFKKMVNELHNAGIEVIIDVV 288 (718)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 57899999999999999999975
No 343
>1xpp_A TA1416, DNA-directed RNA polymerase subunit L; structural genomics, protein structure initiative, MCSG; 1.60A {Thermoplasma acidophilum} SCOP: d.74.3.2
Probab=25.86 E-value=1.9e+02 Score=20.81 Aligned_cols=83 Identities=12% Similarity=0.017 Sum_probs=43.9
Q ss_pred HHHcCCCCeEEecCCCceEEEEEEcCCcchhhhhhhhccccchhHHHHHHHHHHHHHHHHhcCc-EEEEEeEE---CCEe
Q 046506 199 RLVGSDKRFEVVFPRHFAVVCFRVSPSAVMDKLKTKYENSLLSEEERINEFNRELLESINASGK-AYMTHAVL---GGIY 274 (310)
Q Consensus 199 ~~L~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~-~~~~~~~~---~~~~ 274 (310)
++..++ .+++... ..+...|.+..-+ ..+..-|+..|.++-. .++.+..+ ....
T Consensus 6 ~~~~km-eiki~~k-~~n~~~f~i~~ED--------------------HTLgNlLr~~Llkdp~V~fAgY~vpHPle~~~ 63 (115)
T 1xpp_A 6 ERTAES-SLRVISK-EKNSITVEMINYD--------------------NTLLRTLVEEILKDDQVDEARYYIKHPVIDNP 63 (115)
T ss_dssp ---CCC-EEEEEEE-CSSEEEEEEESCC--------------------HHHHHHHHHHHTTCTTEEEEEEECSSTTTSCC
T ss_pred ccccce-EEEEEcC-CCCEEEEEEeCCC--------------------chhHHHHHHHHhcCCCeEEEEeecCCCCCCcc
Confidence 344444 4566543 3345667777654 6666778888877554 45554433 3567
Q ss_pred EEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 275 AIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 275 ~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
.+|+- +...+..+-+...++.|.+.+..+
T Consensus 64 ~lrIq-T~~~~p~eaL~~al~~L~~~~~~l 92 (115)
T 1xpp_A 64 QIYVR-VKSGKPQSAIKRAVRKLSKLYEDL 92 (115)
T ss_dssp EEEEE-ESSSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEE-eCCCChHHHHHHHHHHHHHHHHHH
Confidence 89988 433343344444444444444433
No 344
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=25.76 E-value=62 Score=27.34 Aligned_cols=56 Identities=18% Similarity=0.184 Sum_probs=33.7
Q ss_pred cccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 24 YGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 24 ~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
+.+|.+.+++.++...+.+..-..++-+.+...+=+.++-.++.+.+.+. .+++++
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 74 (289)
T 2yxg_A 16 KEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIA 74 (289)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 48999999999998877765433333333333333334455566666653 366653
No 345
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A
Probab=25.55 E-value=30 Score=35.16 Aligned_cols=27 Identities=11% Similarity=0.092 Sum_probs=24.0
Q ss_pred cccccCChHHHHHHHHHhCcEEEeecc
Q 046506 56 AITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 56 ~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
..|+.++++++++-||++|+.|++|-+
T Consensus 741 ~~Gt~~efk~lV~alH~~GI~VIlDvV 767 (1039)
T 3klk_A 741 KYGSDEDLRNALQALHKAGLQAIADWV 767 (1039)
T ss_dssp TTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 357778899999999999999999976
No 346
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=25.52 E-value=48 Score=27.72 Aligned_cols=20 Identities=15% Similarity=0.140 Sum_probs=14.2
Q ss_pred cCChHHHHHHHHHhCcEEEe
Q 046506 60 VDTLKPLCDVAKQFGIWVHV 79 (310)
Q Consensus 60 ~~pl~~I~~l~~~~g~~l~v 79 (310)
.+|++++.+++++||+.+++
T Consensus 102 ~d~~~~~~~~~a~~~~~vvl 121 (262)
T 1f6y_A 102 REKVEKLFPLAVEHGAALIG 121 (262)
T ss_dssp HHHHHHHHHHHHHTTCEEEE
T ss_pred cccHHHHHHHHHHhCCcEEE
Confidence 36677788888888876554
No 347
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=25.16 E-value=21 Score=30.31 Aligned_cols=58 Identities=5% Similarity=-0.097 Sum_probs=33.9
Q ss_pred ecCCCCCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCcEEE
Q 046506 17 KTTKSSSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVH 78 (310)
Q Consensus 17 ~~~~~~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~ 78 (310)
|-+++ +.+|.+.+++.++...+. ..-..++.+++...+=+.++-.++.+.+.+ .++++
T Consensus 9 Pf~~d--g~iD~~~l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~-rvpvi 66 (283)
T 2pcq_A 9 PFDRE--GRLDEEAFRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGLRALRP-RKPFL 66 (283)
T ss_dssp CBCTT--CCBCHHHHHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC-SSCCE
T ss_pred CCCCC--CCcCHHHHHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh-CCcEE
Confidence 44443 599999999999876654 433333333333333333445566666666 66655
No 348
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=24.91 E-value=22 Score=34.60 Aligned_cols=23 Identities=26% Similarity=0.390 Sum_probs=21.2
Q ss_pred cCChHHHHHHHHHhCcEEEeecc
Q 046506 60 VDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 60 ~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
.++++++++-||++|+.|++|.+
T Consensus 315 ~~dfk~LV~~aH~~GI~VIlDvV 337 (718)
T 2e8y_A 315 KTELKQMINTLHQHGLRVILDVV 337 (718)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEe
Confidence 57899999999999999999986
No 349
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=24.77 E-value=52 Score=27.93 Aligned_cols=56 Identities=18% Similarity=0.232 Sum_probs=33.1
Q ss_pred cccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 24 YGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 24 ~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
+.+|.+.+++.++...+.+..-..++-+++...+=+.++-.++.+.+.+. .+++++
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 74 (294)
T 2ehh_A 16 GEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIA 74 (294)
T ss_dssp TEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 48999999999998877665432232333333222334455566666653 366663
No 350
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=24.72 E-value=62 Score=23.48 Aligned_cols=18 Identities=17% Similarity=0.090 Sum_probs=15.2
Q ss_pred HHHHHHHHHhCcEEEeecc
Q 046506 64 KPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 64 ~~I~~l~~~~g~~l~vD~a 82 (310)
+++.++|+++|+.++ ..+
T Consensus 95 ~e~~~~a~~~Girvv-~nC 112 (122)
T 3ff4_A 95 EELEEILSENGIEPV-IGC 112 (122)
T ss_dssp HHHHHHHHHTTCEEE-ESC
T ss_pred HHHHHHHHHcCCeEE-CCc
Confidence 799999999999987 344
No 351
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=23.84 E-value=43 Score=23.42 Aligned_cols=20 Identities=15% Similarity=0.300 Sum_probs=17.4
Q ss_pred hHHHHHHHHHhCcEEEeecc
Q 046506 63 LKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 63 l~~I~~l~~~~g~~l~vD~a 82 (310)
-.+|.++|+++|++++-|-.
T Consensus 44 A~~I~~~A~e~gVPi~e~~~ 63 (97)
T 3t7y_A 44 AKRIIAEAEKYGVPIMRNVP 63 (97)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCeEEECHH
Confidence 45799999999999998864
No 352
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=23.66 E-value=31 Score=29.51 Aligned_cols=57 Identities=12% Similarity=0.052 Sum_probs=35.2
Q ss_pred CcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 23 SYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 23 ~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
++.+|.+.+++.++...+.+..-.+++-+.+...+=+.++-.++.+.+.+. .+++++
T Consensus 19 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 78 (300)
T 3eb2_A 19 EGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVA 78 (300)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 459999999999998877765433333343333333344455666666664 356654
No 353
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=23.65 E-value=83 Score=26.01 Aligned_cols=36 Identities=28% Similarity=0.282 Sum_probs=26.8
Q ss_pred cEEEEEeccCCcccccCChHHHHHHHHHhCcEEEeecc
Q 046506 45 PLFLCATIGTTAITAVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 45 ~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
..+|+++-+.+..|. +|+ +.+++++++|+.+++=|.
T Consensus 11 k~iillTDG~~~~g~-~p~-~aa~~a~~~gi~v~tIGi 46 (242)
T 3rag_A 11 RQILVITDGCSNIGP-DPV-EAARRAHRHGIVVNVIGI 46 (242)
T ss_dssp EEEEEEESSCCCSSS-CHH-HHHHHHHHTTCEEEEEEE
T ss_pred cEEEEEccCCCCCCC-CHH-HHHHHHHHCCCEEEEEEe
Confidence 357888888877775 666 567889999999876544
No 354
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=23.16 E-value=42 Score=32.21 Aligned_cols=24 Identities=25% Similarity=0.321 Sum_probs=21.9
Q ss_pred ccCChHHHHHHHHHhCcEEEeecc
Q 046506 59 AVDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 59 ~~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
+.++++++++-||++|+.|++|.+
T Consensus 240 ~~~d~~~lv~~~H~~Gi~VilD~V 263 (657)
T 2wsk_A 240 ALDEFRDAIKALHKAGIEVILDIV 263 (657)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEe
Confidence 468899999999999999999976
No 355
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=22.89 E-value=38 Score=32.87 Aligned_cols=24 Identities=21% Similarity=0.360 Sum_probs=20.8
Q ss_pred cCChHHHHHHHHHhCcEEEeeccc
Q 046506 60 VDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 60 ~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
+++++++++-||++|+.|++|.+.
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~ 277 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVY 277 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHHHHCCCEEEEEecc
Confidence 467889999999999999999763
No 356
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=22.31 E-value=48 Score=23.22 Aligned_cols=20 Identities=25% Similarity=0.222 Sum_probs=17.3
Q ss_pred hHHHHHHHHHhCcEEEeecc
Q 046506 63 LKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 63 l~~I~~l~~~~g~~l~vD~a 82 (310)
-.+|.++|+++|++++-|-.
T Consensus 29 A~~I~e~A~e~gVPi~e~~~ 48 (98)
T 3c01_E 29 ALAVRAYAEKVGVPVIVDIK 48 (98)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCCeecCHH
Confidence 46799999999999998854
No 357
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=22.29 E-value=63 Score=27.38 Aligned_cols=57 Identities=12% Similarity=0.136 Sum_probs=36.0
Q ss_pred CCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh---CcEEEe
Q 046506 22 SSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF---GIWVHV 79 (310)
Q Consensus 22 ~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~---g~~l~v 79 (310)
.+ .+|.+.+++.++...+.+..-.+++.+.+...+=+.++-.++.+.+.+. .+++++
T Consensus 17 ~d-~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 76 (292)
T 3daq_A 17 NN-KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIA 76 (292)
T ss_dssp TT-EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CC-CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 35 8999999999998887775433333344433333345555677766664 366665
No 358
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=21.87 E-value=1.8e+02 Score=19.18 Aligned_cols=46 Identities=15% Similarity=0.253 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHhcCcEEEEEeEECCEeEEEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 046506 246 INEFNRELLESINASGKAYMTHAVLGGIYAIRFAAGATLTEERHVMVAWTVVQEHLEAL 304 (310)
Q Consensus 246 ~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~iRis~~~~~~t~edi~~li~~l~~~~~~~ 304 (310)
+.+.-.++.+.+.+.| ...+|+|++. -+..+-+.+.+.|-++..++
T Consensus 29 lqkvlnelmdyikkqg-----------akrvrisita--rtkkeaekfaailikvfael 74 (106)
T 1qys_A 29 LQKVLNELMDYIKKQG-----------AKRVRISITA--RTKKEAEKFAAILIKVFAEL 74 (106)
T ss_dssp HHHHHHHHHHHHHHHC-----------CSEEEEEEEC--SSHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcC-----------CcEEEEEEEe--cchhHHHHHHHHHHHHHHHh
Confidence 3454456666666665 3478999774 45667777776666555443
No 359
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A*
Probab=21.60 E-value=52 Score=31.33 Aligned_cols=24 Identities=21% Similarity=0.303 Sum_probs=21.6
Q ss_pred cCChHHHHHHHHHhCcEEEeeccc
Q 046506 60 VDTLKPLCDVAKQFGIWVHVDAAY 83 (310)
Q Consensus 60 ~~pl~~I~~l~~~~g~~l~vD~a~ 83 (310)
.++++++++-||++|+.|++|.+.
T Consensus 181 ~~~~~~lv~~~H~~Gi~VilD~V~ 204 (637)
T 1gjw_A 181 DEEFKAFVEACHILGIRVILDFIP 204 (637)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHHHHCCCEEEEEECc
Confidence 578999999999999999999863
No 360
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=21.31 E-value=1e+02 Score=26.28 Aligned_cols=56 Identities=20% Similarity=0.151 Sum_probs=34.5
Q ss_pred cCHHHHHHHHHHHHHcCCCcEEEEEeccCCccccc---CChHHHHHHHHHhCcEEEeecccc
Q 046506 26 LSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAV---DTLKPLCDVAKQFGIWVHVDAAYA 84 (310)
Q Consensus 26 id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~---~pl~~I~~l~~~~g~~l~vD~a~~ 84 (310)
.++++++.++..-...+... ++++ ++.+..+.- .++..|..+.+ +++++.+|..|+
T Consensus 166 ~t~~ei~~ave~i~~~Gn~~-iiL~-erg~~y~~~~~~vdl~~i~~lk~-~~~PV~~D~sHs 224 (298)
T 3fs2_A 166 LAPWDMKNVLAKITESGNPN-VLAT-ERGVSFGYNTLVSDMRALPIMAG-LGAPVIFDATHS 224 (298)
T ss_dssp CCGGGHHHHHHHHHTTTCCC-EEEE-ECCEECSSSCEECCTTHHHHHHT-TTSCEEEEHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCe-EEEE-ECCCCCCCCCCccCHHHHHHHHH-cCCcEEEcCCCc
Confidence 57777777776654444333 2322 332222332 36888888766 899999998886
No 361
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=21.22 E-value=53 Score=22.77 Aligned_cols=20 Identities=20% Similarity=0.119 Sum_probs=17.3
Q ss_pred hHHHHHHHHHhCcEEEeecc
Q 046506 63 LKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 63 l~~I~~l~~~~g~~l~vD~a 82 (310)
-.+|.++|+++|++++-|-.
T Consensus 29 A~~I~e~A~e~gVPi~e~~~ 48 (93)
T 2vt1_B 29 ALAVRKYANEVGIPTVRDVK 48 (93)
T ss_dssp HHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEECHH
Confidence 46799999999999998864
No 362
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=21.05 E-value=37 Score=34.11 Aligned_cols=23 Identities=30% Similarity=0.326 Sum_probs=21.1
Q ss_pred cCChHHHHHHHHHhCcEEEeecc
Q 046506 60 VDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 60 ~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
.++++++++-||++|+.|++|.+
T Consensus 531 ~~dfk~LV~~aH~~GI~VILDvV 553 (921)
T 2wan_A 531 ITELKQLIQSLHQQRIGVNMDVV 553 (921)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEEEEc
Confidence 57899999999999999999986
No 363
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=21.05 E-value=49 Score=27.99 Aligned_cols=50 Identities=18% Similarity=0.250 Sum_probs=30.9
Q ss_pred cccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHh
Q 046506 24 YGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQF 73 (310)
Q Consensus 24 ~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~ 73 (310)
+.+|.+.+++.++...+.+..-.+++-+.+...+=+.++-.++.+.+.+.
T Consensus 14 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~ 63 (286)
T 2r91_A 14 GRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSA 63 (286)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 48999999999998877665432233333333333334455677766664
No 364
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=20.55 E-value=2.8e+02 Score=22.51 Aligned_cols=58 Identities=12% Similarity=-0.012 Sum_probs=34.2
Q ss_pred EEEEecCCC------CCcccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccccCChHHHHHHHHHhCc
Q 046506 13 FRAIKTTKS------SSYGLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITAVDTLKPLCDVAKQFGI 75 (310)
Q Consensus 13 v~~v~~~~~------~~~~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~~~pl~~I~~l~~~~g~ 75 (310)
+..+|+... +.+++++++..++++.-. +..++.+|-++..-.-.+.+++.+.+++.|+
T Consensus 186 v~il~~g~~~~~~~~~~~hm~~~ea~~~~~~l~-----~~~vi~~H~~~~~~~~~~~~~l~~~~~~~g~ 249 (264)
T 3rpc_A 186 VIIMNTGYAQILGFEDSIIMGTKDIGRMVVRKP-----EAKIIAVHMDTVNHTATSRKDVRKFIKGNNI 249 (264)
T ss_dssp EEEEECSCBCBTTCSSCSSCCHHHHHHHHHHCT-----TSEEEEESCSSSTTBCSCHHHHHHHHHHTTC
T ss_pred EEEEecCccccccccCCcccCHHHHHHHHHhCC-----cCeEEEEccccccccccCHHHHHHHHHHcCC
Confidence 666665410 245777777777764431 4456667766543334567777777777654
No 365
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=20.29 E-value=1.7e+02 Score=24.51 Aligned_cols=57 Identities=12% Similarity=0.102 Sum_probs=32.6
Q ss_pred ccCHHHHHHHHHHHHHcCCCcEEEEEeccCCcccc-cCChHHHHHHHHHhCcEEEeecc
Q 046506 25 GLSPDSLMAKINSDVEAGLIPLFLCATIGTTAITA-VDTLKPLCDVAKQFGIWVHVDAA 82 (310)
Q Consensus 25 ~id~~~Le~~i~~~~~~~~~~~~v~~~~~~~~~G~-~~pl~~I~~l~~~~g~~l~vD~a 82 (310)
.++++++++.+......-...-++.+. ++...+. .+-+.++.+.++++|+.+++|-.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~v~~~-g~~~~~~~~~~~~~~~~~a~~~g~~v~~D~~ 171 (320)
T 3ie7_A 114 TVSQTNKDNLLKQIAKKVKKEDMVVIA-GSPPPHYTLSDFKELLRTVKATGAFLGCDNS 171 (320)
T ss_dssp CCCHHHHHHHHHHHHHHCCTTCEEEEE-SCCCTTCCHHHHHHHHHHHHHHTCEEEEECC
T ss_pred CCCHHHHHHHHHHHHHHhcCCCEEEEe-CCCCCCCCHHHHHHHHHHHHhcCCEEEEECC
Confidence 577888776654332211112244443 3222121 12367888889999999999975
Done!