Query 046508
Match_columns 932
No_of_seqs 254 out of 284
Neff 4.6
Searched_HMMs 46136
Date Fri Mar 29 12:51:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046508.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046508hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd04184 GT2_RfbC_Mx_like Myxoc 99.8 7.4E-20 1.6E-24 181.6 16.1 187 176-384 1-194 (202)
2 COG1216 Predicted glycosyltran 99.8 3.2E-19 6.9E-24 193.1 15.7 200 175-384 2-213 (305)
3 cd04195 GT2_AmsE_like GT2_AmsE 99.8 2.7E-18 6E-23 170.6 13.4 187 179-384 1-194 (201)
4 TIGR01556 rhamnosyltran L-rham 99.8 5.1E-18 1.1E-22 179.9 14.0 184 183-384 1-194 (281)
5 cd02510 pp-GalNAc-T pp-GalNAc- 99.7 1.6E-17 3.4E-22 178.2 14.8 196 179-384 1-218 (299)
6 cd04185 GT_2_like_b Subfamily 99.7 2.5E-17 5.5E-22 164.5 15.2 156 180-381 1-164 (202)
7 cd06421 CESA_CelA_like CESA_Ce 99.7 9.2E-18 2E-22 170.0 11.2 194 176-383 1-203 (234)
8 cd02520 Glucosylceramide_synth 99.7 4.2E-17 9E-22 164.0 14.5 158 176-383 1-169 (196)
9 cd06437 CESA_CaSu_A2 Cellulose 99.7 4.6E-17 9.9E-22 167.0 14.0 192 176-384 1-206 (232)
10 cd06433 GT_2_WfgS_like WfgS an 99.7 1.1E-16 2.3E-21 156.5 14.0 183 179-384 1-187 (202)
11 cd04196 GT_2_like_d Subfamily 99.7 1.2E-16 2.6E-21 159.1 13.8 189 179-384 1-196 (214)
12 cd06439 CESA_like_1 CESA_like_ 99.7 9.4E-17 2E-21 165.6 13.1 186 174-381 27-219 (251)
13 PRK10018 putative glycosyl tra 99.7 2.6E-16 5.6E-21 170.1 16.5 106 174-279 3-110 (279)
14 PRK11204 N-glycosyltransferase 99.7 2.3E-16 4.9E-21 176.9 14.9 190 174-384 52-253 (420)
15 cd06420 GT2_Chondriotin_Pol_N 99.7 4.5E-16 9.7E-21 152.2 15.0 164 180-383 1-172 (182)
16 cd06442 DPM1_like DPM1_like re 99.7 1E-16 2.3E-21 161.6 10.8 191 180-384 1-196 (224)
17 cd04192 GT_2_like_e Subfamily 99.7 1.5E-16 3.3E-21 159.9 11.8 187 180-382 1-200 (229)
18 cd02526 GT2_RfbF_like RfbF is 99.7 4.6E-16 1E-20 158.6 14.2 185 180-384 1-197 (237)
19 PF00535 Glycos_transf_2: Glyc 99.7 1E-16 2.2E-21 150.8 8.0 100 179-280 1-104 (169)
20 cd04186 GT_2_like_c Subfamily 99.7 6.9E-16 1.5E-20 146.6 13.4 154 180-384 1-158 (166)
21 cd06913 beta3GnTL1_like Beta 1 99.7 3.6E-16 7.8E-21 159.0 12.0 182 180-384 1-202 (219)
22 cd06434 GT2_HAS Hyaluronan syn 99.7 2.6E-16 5.7E-21 160.1 10.8 191 177-383 1-205 (235)
23 cd06435 CESA_NdvC_like NdvC_li 99.7 4.9E-16 1.1E-20 158.9 12.9 189 179-384 1-202 (236)
24 cd02525 Succinoglycan_BP_ExoA 99.7 1.7E-15 3.7E-20 154.2 16.4 187 177-383 1-200 (249)
25 cd06427 CESA_like_2 CESA_like_ 99.7 1.1E-15 2.3E-20 158.5 14.0 192 176-384 1-205 (241)
26 PF13641 Glyco_tranf_2_3: Glyc 99.6 4.6E-16 9.9E-21 158.0 10.4 191 176-384 1-203 (228)
27 PRK10073 putative glycosyl tra 99.6 1.3E-15 2.9E-20 167.6 14.2 103 174-279 4-110 (328)
28 cd06423 CESA_like CESA_like is 99.6 1.7E-15 3.6E-20 142.0 11.8 170 180-358 1-177 (180)
29 cd04188 DPG_synthase DPG_synth 99.6 6.6E-16 1.4E-20 156.2 9.7 191 180-385 1-202 (211)
30 cd02522 GT_2_like_a GT_2_like_ 99.6 2.8E-15 6E-20 151.0 13.4 173 178-381 1-177 (221)
31 cd02514 GT13_GLCNAC-TI GT13_GL 99.6 3E-15 6.5E-20 165.8 14.7 195 599-841 2-214 (334)
32 TIGR03111 glyc2_xrt_Gpos1 puta 99.6 1.5E-15 3.2E-20 173.1 12.1 196 174-381 47-257 (439)
33 PLN02726 dolichyl-phosphate be 99.6 3E-15 6.6E-20 155.8 13.5 197 174-389 7-216 (243)
34 PRK14583 hmsR N-glycosyltransf 99.6 9.5E-15 2.1E-19 166.5 15.2 192 174-384 73-274 (444)
35 TIGR03469 HonB hopene-associat 99.6 9.2E-15 2E-19 163.7 14.0 193 174-381 38-252 (384)
36 TIGR03472 HpnI hopanoid biosyn 99.6 9.1E-15 2E-19 163.0 13.3 194 174-383 39-245 (373)
37 PF03071 GNT-I: GNT-I family; 99.5 1.9E-13 4.1E-18 155.3 16.0 211 588-842 85-310 (434)
38 PRK10063 putative glycosyl tra 99.5 5.9E-13 1.3E-17 141.2 14.0 98 176-276 1-104 (248)
39 cd04179 DPM_DPG-synthase_like 99.5 2.3E-13 5.1E-18 133.1 9.9 97 180-278 1-103 (185)
40 PRK11498 bcsA cellulose syntha 99.4 4.4E-13 9.4E-18 163.3 13.5 191 174-384 258-462 (852)
41 COG0463 WcaA Glycosyltransfera 99.4 5.5E-13 1.2E-17 122.7 10.6 102 175-279 2-107 (291)
42 TIGR03030 CelA cellulose synth 99.4 3E-13 6.5E-18 163.1 10.8 199 174-384 129-351 (713)
43 PRK13915 putative glucosyl-3-p 99.4 2.6E-12 5.6E-17 140.9 15.1 116 154-279 17-141 (306)
44 PTZ00260 dolichyl-phosphate be 99.4 2.4E-12 5.2E-17 142.5 12.5 201 174-386 68-287 (333)
45 cd04187 DPM1_like_bac Bacteria 99.4 1.5E-12 3.2E-17 128.4 9.7 97 180-278 1-104 (181)
46 cd02511 Beta4Glucosyltransfera 99.3 3.9E-12 8.5E-17 131.9 11.1 95 177-280 1-97 (229)
47 cd06436 GlcNAc-1-P_transferase 99.3 6.5E-12 1.4E-16 126.7 10.2 97 180-279 1-114 (191)
48 cd00761 Glyco_tranf_GTA_type G 99.2 1.3E-10 2.8E-15 106.5 12.6 95 180-276 1-99 (156)
49 COG1215 Glycosyltransferases, 99.2 1.3E-10 2.9E-15 129.8 14.4 192 176-384 54-258 (439)
50 cd06438 EpsO_like EpsO protein 99.2 5.7E-11 1.2E-15 118.2 9.6 97 180-279 1-106 (183)
51 PRK10714 undecaprenyl phosphat 99.2 1.2E-10 2.7E-15 128.4 12.1 182 176-387 6-200 (325)
52 PF10111 Glyco_tranf_2_2: Glyc 99.1 5.2E-10 1.1E-14 120.6 12.1 193 179-380 1-211 (281)
53 cd04190 Chitin_synth_C C-termi 99.0 3.5E-10 7.5E-15 118.9 7.5 172 180-381 1-210 (244)
54 cd02514 GT13_GLCNAC-TI GT13_GL 99.0 5.3E-09 1.2E-13 116.5 14.1 169 178-374 2-193 (334)
55 cd04191 Glucan_BSP_ModH Glucan 98.9 5.2E-09 1.1E-13 112.2 11.2 197 178-384 1-224 (254)
56 PRK14716 bacteriophage N4 adso 98.7 8.1E-08 1.7E-12 112.5 14.0 192 174-385 64-283 (504)
57 KOG2978 Dolichol-phosphate man 98.6 8.2E-08 1.8E-12 98.8 8.7 169 176-356 3-180 (238)
58 PRK05454 glucosyltransferase M 98.6 3.4E-07 7.3E-12 110.9 13.0 203 174-384 122-349 (691)
59 PRK11234 nfrB bacteriophage N4 98.2 6.7E-06 1.4E-10 100.3 11.9 192 174-384 61-279 (727)
60 KOG2977 Glycosyltransferase [G 98.0 2.6E-05 5.6E-10 85.0 10.0 190 176-385 67-283 (323)
61 PRK15489 nfrB bacteriophage N4 98.0 6.9E-05 1.5E-09 91.1 14.4 191 174-385 69-290 (703)
62 PF13712 Glyco_tranf_2_5: Glyc 98.0 2.3E-05 5E-10 82.7 8.9 176 178-384 1-191 (217)
63 PF00535 Glycos_transf_2: Glyc 97.7 0.0001 2.2E-09 69.5 8.0 108 600-711 1-108 (169)
64 PF09258 Glyco_transf_64: Glyc 97.7 0.00019 4.1E-09 77.4 10.6 181 178-383 1-190 (247)
65 cd04186 GT_2_like_c Subfamily 97.6 0.0006 1.3E-08 64.9 11.1 102 601-709 1-102 (166)
66 cd04184 GT2_RfbC_Mx_like Myxoc 97.5 0.0013 2.7E-08 65.7 11.8 108 597-707 1-109 (202)
67 KOG1413 N-acetylglucosaminyltr 97.3 0.0021 4.6E-08 72.1 11.8 129 591-728 62-209 (411)
68 cd06439 CESA_like_1 CESA_like_ 97.2 0.0022 4.9E-08 66.6 11.3 112 591-706 23-134 (251)
69 cd06423 CESA_like CESA_like is 97.2 0.0042 9.2E-08 58.2 11.0 98 601-702 1-99 (180)
70 PF03071 GNT-I: GNT-I family; 97.1 0.00061 1.3E-08 78.8 5.5 154 174-351 91-268 (434)
71 cd02525 Succinoglycan_BP_ExoA 97.1 0.0038 8.2E-08 64.0 10.6 106 598-706 1-106 (249)
72 cd04192 GT_2_like_e Subfamily 97.1 0.0032 6.9E-08 63.7 9.9 105 601-707 1-108 (229)
73 TIGR03111 glyc2_xrt_Gpos1 puta 97.0 0.0043 9.2E-08 71.7 11.5 110 596-707 48-157 (439)
74 cd04179 DPM_DPG-synthase_like 97.0 0.0033 7.1E-08 61.8 9.0 105 601-707 1-105 (185)
75 PF13641 Glyco_tranf_2_3: Glyc 97.0 0.0014 2.9E-08 67.1 6.3 105 597-706 1-111 (228)
76 PRK11204 N-glycosyltransferase 97.0 0.0043 9.4E-08 70.4 10.9 108 596-707 53-160 (420)
77 PF05060 MGAT2: N-acetylglucos 97.0 0.0067 1.5E-07 68.8 12.1 210 596-843 30-297 (356)
78 cd06421 CESA_CelA_like CESA_Ce 96.9 0.0078 1.7E-07 61.4 11.3 106 597-708 1-111 (234)
79 cd06427 CESA_like_2 CESA_like_ 96.9 0.008 1.7E-07 62.8 11.3 109 597-707 1-110 (241)
80 cd06442 DPM1_like DPM1_like re 96.9 0.005 1.1E-07 62.5 9.4 104 601-707 1-104 (224)
81 cd02520 Glucosylceramide_synth 96.9 0.01 2.3E-07 60.0 11.7 106 597-706 1-111 (196)
82 cd04196 GT_2_like_d Subfamily 96.8 0.0084 1.8E-07 60.0 10.3 104 600-708 1-106 (214)
83 PLN02726 dolichyl-phosphate be 96.8 0.011 2.4E-07 62.1 11.6 111 596-708 8-120 (243)
84 cd04185 GT_2_like_b Subfamily 96.8 0.0077 1.7E-07 60.5 10.1 103 601-707 1-105 (202)
85 cd02510 pp-GalNAc-T pp-GalNAc- 96.7 0.012 2.5E-07 63.9 11.4 107 600-708 1-110 (299)
86 cd06420 GT2_Chondriotin_Pol_N 96.7 0.0083 1.8E-07 58.9 9.4 102 601-706 1-104 (182)
87 cd06437 CESA_CaSu_A2 Cellulose 96.6 0.016 3.5E-07 59.8 11.3 107 597-705 1-111 (232)
88 PRK14583 hmsR N-glycosyltransf 96.5 0.015 3.2E-07 67.3 11.4 109 596-708 74-182 (444)
89 cd04195 GT2_AmsE_like GT2_AmsE 96.5 0.024 5.2E-07 56.7 11.5 104 601-708 2-107 (201)
90 cd06438 EpsO_like EpsO protein 96.5 0.017 3.7E-07 57.7 9.8 103 601-707 1-107 (183)
91 KOG3738 Predicted polypeptide 96.4 0.0094 2E-07 68.0 7.9 100 177-280 125-230 (559)
92 PF13632 Glyco_trans_2_3: Glyc 96.3 0.0063 1.4E-07 61.1 6.0 112 257-383 1-116 (193)
93 PRK10018 putative glycosyl tra 96.3 0.039 8.5E-07 60.6 12.4 108 596-708 4-112 (279)
94 cd00761 Glyco_tranf_GTA_type G 96.3 0.027 5.9E-07 51.5 9.5 98 601-702 1-98 (156)
95 cd06434 GT2_HAS Hyaluronan syn 96.2 0.043 9.3E-07 56.3 11.4 102 598-707 1-103 (235)
96 cd06433 GT_2_WfgS_like WfgS an 96.2 0.037 8E-07 54.3 10.2 101 600-707 1-101 (202)
97 PRK10073 putative glycosyl tra 96.2 0.038 8.3E-07 61.7 11.5 107 596-707 5-111 (328)
98 cd04187 DPM1_like_bac Bacteria 96.0 0.03 6.5E-07 55.4 9.0 103 601-705 1-104 (181)
99 TIGR03472 HpnI hopanoid biosyn 96.0 0.066 1.4E-06 60.6 12.5 107 596-706 40-151 (373)
100 cd06435 CESA_NdvC_like NdvC_li 95.8 0.076 1.6E-06 54.7 10.8 102 600-706 1-109 (236)
101 cd02526 GT2_RfbF_like RfbF is 95.6 0.099 2.1E-06 53.7 10.9 93 602-703 2-97 (237)
102 cd02511 Beta4Glucosyltransfera 95.6 0.092 2E-06 54.9 10.7 98 598-708 1-98 (229)
103 cd04188 DPG_synthase DPG_synth 95.3 0.074 1.6E-06 54.2 8.8 105 601-707 1-108 (211)
104 PF13704 Glyco_tranf_2_4: Glyc 95.3 0.075 1.6E-06 48.3 7.7 81 189-275 6-96 (97)
105 cd02522 GT_2_like_a GT_2_like_ 95.2 0.11 2.3E-06 52.7 9.4 93 599-702 1-93 (221)
106 TIGR03469 HonB hopene-associat 95.0 0.29 6.3E-06 55.7 13.4 111 596-708 39-160 (384)
107 cd06436 GlcNAc-1-P_transferase 95.0 0.11 2.3E-06 52.8 8.9 101 601-706 1-114 (191)
108 COG1216 Predicted glycosyltran 95.0 0.15 3.2E-06 56.0 10.5 112 596-712 2-115 (305)
109 PRK10063 putative glycosyl tra 94.8 0.22 4.8E-06 53.5 10.8 105 597-705 1-106 (248)
110 PRK11498 bcsA cellulose syntha 94.7 0.26 5.6E-06 62.1 12.6 100 597-703 260-361 (852)
111 KOG3736 Polypeptide N-acetylga 94.5 0.025 5.4E-07 67.9 3.1 106 174-280 140-252 (578)
112 PF13506 Glyco_transf_21: Glyc 94.5 0.03 6.6E-07 57.3 3.3 134 234-383 6-146 (175)
113 KOG3737 Predicted polypeptide 94.1 0.12 2.5E-06 59.3 7.2 104 174-278 153-264 (603)
114 TIGR03030 CelA cellulose synth 94.0 0.38 8.1E-06 59.6 11.9 109 597-714 131-258 (713)
115 KOG2791 N-acetylglucosaminyltr 93.9 0.38 8.3E-06 54.4 10.5 61 589-651 109-169 (455)
116 COG0463 WcaA Glycosyltransfera 93.7 0.8 1.7E-05 42.3 10.7 101 596-701 2-102 (291)
117 KOG1022 Acetylglucosaminyltran 93.6 0.46 1E-05 56.3 10.9 183 176-388 443-640 (691)
118 KOG2547 Ceramide glucosyltrans 93.3 0.58 1.2E-05 53.7 10.8 183 174-374 83-281 (431)
119 cd06913 beta3GnTL1_like Beta 1 93.2 0.75 1.6E-05 47.1 10.7 103 601-706 1-109 (219)
120 cd00899 b4GalT Beta-4-Galactos 93.1 0.74 1.6E-05 49.6 10.7 141 177-381 3-155 (219)
121 PTZ00260 dolichyl-phosphate be 93.0 1.1 2.5E-05 50.4 12.6 113 596-710 69-191 (333)
122 PF01762 Galactosyl_T: Galacto 92.8 0.81 1.8E-05 47.2 10.3 123 244-384 68-195 (195)
123 PRK05454 glucosyltransferase M 92.7 0.94 2E-05 56.1 12.5 109 596-707 123-246 (691)
124 cd04191 Glucan_BSP_ModH Glucan 92.6 1.2 2.7E-05 48.3 11.9 104 600-707 2-121 (254)
125 cd04190 Chitin_synth_C C-termi 91.4 0.95 2.1E-05 48.0 9.1 100 601-726 1-110 (244)
126 PRK13915 putative glucosyl-3-p 91.3 1.4 3E-05 49.2 10.7 113 593-707 27-142 (306)
127 PF09258 Glyco_transf_64: Glyc 90.1 0.66 1.4E-05 50.4 6.7 97 599-706 1-100 (247)
128 PRK10714 undecaprenyl phosphat 90.1 2.7 5.9E-05 47.1 11.7 109 597-707 6-116 (325)
129 PLN02893 Cellulose synthase-li 90.0 1.3 2.9E-05 54.9 9.9 153 229-398 263-478 (734)
130 PF04666 Glyco_transf_54: N-Ac 88.7 2.4 5.1E-05 47.7 9.8 142 154-295 29-216 (297)
131 KOG2264 Exostosin EXT1L [Signa 87.7 4.4 9.6E-05 48.7 11.3 183 177-388 650-852 (907)
132 PRK14716 bacteriophage N4 adso 87.5 3.4 7.4E-05 49.6 10.7 109 591-705 60-182 (504)
133 PF03142 Chitin_synth_2: Chiti 87.3 4.8 0.0001 48.6 11.8 59 167-225 16-82 (527)
134 PF03214 RGP: Reversibly glyco 86.8 0.78 1.7E-05 52.0 4.6 95 174-274 6-111 (348)
135 COG1215 Glycosyltransferases, 86.0 5.6 0.00012 45.1 11.1 107 596-706 53-162 (439)
136 PF02434 Fringe: Fringe-like; 85.9 1.7 3.6E-05 47.4 6.5 118 253-391 85-211 (252)
137 TIGR01556 rhamnosyltran L-rham 85.9 3.6 7.8E-05 44.2 9.0 94 604-708 1-100 (281)
138 PLN02189 cellulose synthase 83.5 4.1 8.9E-05 52.3 9.2 149 190-352 441-623 (1040)
139 PF05679 CHGN: Chondroitin N-a 82.9 24 0.00051 42.4 14.8 102 175-276 246-363 (499)
140 PLN02638 cellulose synthase A 81.9 5.9 0.00013 51.1 9.7 152 190-352 459-641 (1079)
141 cd00218 GlcAT-I Beta1,3-glucur 80.7 6 0.00013 42.9 8.0 98 177-278 2-119 (223)
142 PLN03180 reversibly glycosylat 78.9 3.2 6.9E-05 47.3 5.4 25 246-270 85-109 (346)
143 COG1213 Predicted sugar nucleo 78.2 6.9 0.00015 42.8 7.5 100 174-280 20-122 (239)
144 PLN02195 cellulose synthase A 77.7 9.3 0.0002 49.0 9.4 149 190-352 362-544 (977)
145 PF13733 Glyco_transf_7N: N-te 74.7 8.1 0.00017 39.1 6.4 83 167-271 37-128 (136)
146 PF11316 Rhamno_transf: Putati 74.6 6.7 0.00014 42.7 6.3 85 191-279 45-139 (234)
147 PF01755 Glyco_transf_25: Glyc 74.1 3 6.6E-05 42.7 3.4 28 681-708 85-112 (200)
148 TIGR00236 wecB UDP-N-acetylglu 73.1 23 0.00051 39.5 10.4 116 442-573 2-117 (365)
149 PRK11234 nfrB bacteriophage N4 72.7 18 0.00038 45.5 10.1 109 595-706 61-180 (727)
150 PF04666 Glyco_transf_54: N-Ac 71.8 4.9 0.00011 45.2 4.6 31 681-711 169-199 (297)
151 PLN03153 hypothetical protein; 66.3 19 0.00041 43.6 8.0 97 253-381 209-310 (537)
152 PRK15489 nfrB bacteriophage N4 64.3 42 0.00091 42.2 10.8 119 585-708 59-190 (703)
153 PF10111 Glyco_tranf_2_2: Glyc 63.9 52 0.0011 36.0 10.5 24 681-704 88-111 (281)
154 PRK02122 glucosamine-6-phospha 61.1 1.3E+02 0.0029 37.6 14.3 43 438-481 367-410 (652)
155 KOG3916 UDP-Gal:glucosylcerami 61.0 28 0.00062 40.1 7.8 87 163-270 137-231 (372)
156 KOG1413 N-acetylglucosaminyltr 59.0 46 0.001 38.7 9.0 111 178-291 69-204 (411)
157 PF03552 Cellulose_synt: Cellu 53.4 35 0.00075 42.9 7.5 146 190-352 109-291 (720)
158 TIGR03568 NeuC_NnaA UDP-N-acet 52.8 1.3E+02 0.0027 34.6 11.5 120 442-575 2-126 (365)
159 PRK02726 molybdopterin-guanine 49.1 78 0.0017 33.0 8.4 85 185-279 30-118 (200)
160 PF04413 Glycos_transf_N: 3-De 46.3 40 0.00086 35.3 5.7 125 441-595 22-151 (186)
161 PLN02458 transferase, transfer 46.1 1E+02 0.0022 35.7 9.1 101 174-279 110-227 (346)
162 cd04182 GT_2_like_f GT_2_like_ 45.6 80 0.0017 31.2 7.6 88 185-279 23-116 (186)
163 COG1519 KdtA 3-deoxy-D-manno-o 44.3 80 0.0017 37.5 8.2 122 436-597 45-167 (419)
164 KOG1476 Beta-1,3-glucuronyltra 44.0 1.1E+02 0.0023 35.3 8.8 99 175-278 86-205 (330)
165 PF00483 NTP_transferase: Nucl 43.4 44 0.00094 35.0 5.5 91 182-276 25-123 (248)
166 KOG3588 Chondroitin synthase 1 43.1 1.1E+02 0.0023 36.1 8.7 229 120-384 181-430 (494)
167 TIGR03202 pucB xanthine dehydr 40.0 1.4E+02 0.0031 30.3 8.5 91 184-279 22-121 (190)
168 COG2943 MdoH Membrane glycosyl 38.6 2.3E+02 0.005 35.0 10.8 107 174-280 142-266 (736)
169 TIGR03310 matur_ygfJ molybdenu 38.1 2E+02 0.0043 28.8 9.1 87 185-278 22-114 (188)
170 PRK15480 glucose-1-phosphate t 37.9 1.7E+02 0.0038 32.7 9.4 96 179-278 26-125 (292)
171 cd04181 NTP_transferase NTP_tr 37.2 1.7E+02 0.0037 29.8 8.6 87 185-276 27-116 (217)
172 PF03452 Anp1: Anp1; InterPro 36.7 2E+02 0.0043 32.4 9.4 105 174-278 23-167 (269)
173 cd02503 MobA MobA catalyzes th 36.6 1.9E+02 0.0041 28.9 8.7 82 186-279 24-109 (181)
174 COG3306 Glycosyltransferase in 36.4 27 0.00059 38.6 2.8 27 682-708 87-113 (255)
175 KOG2978 Dolichol-phosphate man 36.1 2.2E+02 0.0047 31.0 9.1 112 598-712 4-119 (238)
176 PF01501 Glyco_transf_8: Glyco 34.3 1.6E+02 0.0034 30.5 7.9 94 181-277 2-120 (250)
177 TIGR01207 rmlA glucose-1-phosp 32.6 2.1E+02 0.0046 31.8 9.0 96 179-278 22-121 (286)
178 PF12804 NTP_transf_3: MobA-li 32.4 2.1E+02 0.0047 27.8 8.1 85 186-279 22-111 (160)
179 cd06532 Glyco_transf_25 Glycos 32.4 55 0.0012 31.8 3.9 17 681-697 82-98 (128)
180 cd00505 Glyco_transf_8 Members 31.7 2E+02 0.0043 30.8 8.3 96 180-278 3-118 (246)
181 TIGR00466 kdsB 3-deoxy-D-manno 31.1 2.9E+02 0.0064 29.7 9.5 86 185-279 21-113 (238)
182 cd02523 PC_cytidylyltransferas 30.8 2.5E+02 0.0055 29.2 8.8 87 185-277 27-115 (229)
183 cd02540 GT2_GlmU_N_bac N-termi 30.7 3.8E+02 0.0083 27.6 10.0 87 186-279 25-115 (229)
184 cd06915 NTP_transferase_WcbM_l 30.3 2.8E+02 0.0061 28.2 8.9 98 174-278 18-118 (223)
185 PLN02400 cellulose synthase 29.4 1.4E+02 0.003 39.5 7.5 143 190-352 466-648 (1085)
186 KOG2287 Galactosyltransferases 28.7 5.1E+02 0.011 29.9 11.4 184 155-380 105-298 (349)
187 PLN02436 cellulose synthase A 28.6 50 0.0011 43.1 3.6 143 190-352 475-657 (1094)
188 KOG3737 Predicted polypeptide 28.6 1.7E+02 0.0038 34.7 7.5 144 550-706 108-265 (603)
189 cd02518 GT2_SpsF SpsF is a gly 28.0 2.5E+02 0.0053 29.6 8.2 91 184-279 20-113 (233)
190 cd02517 CMP-KDO-Synthetase CMP 28.0 4.3E+02 0.0093 27.7 10.0 85 186-278 25-114 (239)
191 PRK13368 3-deoxy-manno-octulos 28.0 4E+02 0.0086 28.0 9.7 87 186-279 25-114 (238)
192 cd03786 GT1_UDP-GlcNAc_2-Epime 26.7 6.9E+02 0.015 27.5 11.7 39 442-480 1-39 (363)
193 COG0381 WecB UDP-N-acetylgluco 26.6 5.9E+02 0.013 30.2 11.4 118 441-572 4-124 (383)
194 cd04194 GT8_A4GalT_like A4GalT 26.4 2.1E+02 0.0046 30.4 7.4 95 181-278 3-118 (248)
195 cd06426 NTP_transferase_like_2 25.9 2.9E+02 0.0063 28.4 8.2 94 180-278 22-117 (220)
196 KOG1154 Gamma-glutamyl kinase 24.4 74 0.0016 35.4 3.5 38 124-165 108-145 (285)
197 COG2120 Uncharacterized protei 23.9 9.6E+02 0.021 26.1 12.0 89 442-545 12-116 (237)
198 PF06306 CgtA: Beta-1,4-N-acet 23.8 1.4E+02 0.0029 34.6 5.5 95 177-276 88-197 (347)
199 PF02630 SCO1-SenC: SCO1/SenC; 23.7 1.9E+02 0.0042 29.7 6.2 51 598-651 53-114 (174)
200 cd03072 PDI_b'_ERp44 PDIb' fam 23.1 1.2E+02 0.0026 29.0 4.4 58 437-498 15-75 (111)
201 PF05679 CHGN: Chondroitin N-a 23.0 6.5E+02 0.014 30.5 11.4 113 590-703 240-363 (499)
202 PF13848 Thioredoxin_6: Thiore 23.0 1.5E+02 0.0032 29.4 5.2 55 442-498 99-153 (184)
203 cd04906 ACT_ThrD-I_1 First of 22.0 1.6E+02 0.0034 26.7 4.7 22 601-622 4-25 (85)
204 cd04189 G1P_TT_long G1P_TT_lon 21.6 8.3E+02 0.018 25.4 10.6 90 181-276 25-118 (236)
205 PF02585 PIG-L: GlcNAc-PI de-N 21.4 5.1E+02 0.011 24.7 8.3 90 444-547 2-109 (128)
206 cd02982 PDI_b'_family Protein 21.4 1.6E+02 0.0035 26.5 4.6 58 439-498 13-70 (103)
207 PF01012 ETF: Electron transfe 21.1 5.7E+02 0.012 25.5 8.9 91 442-548 1-100 (164)
208 PF05212 DUF707: Protein of un 21.1 3.1E+02 0.0067 31.3 7.5 108 178-293 44-158 (294)
209 PF04123 DUF373: Domain of unk 20.3 2.2E+02 0.0047 33.2 6.3 49 177-227 66-121 (344)
210 PF01913 FTR: Formylmethanofur 20.3 67 0.0014 33.0 2.0 70 173-259 67-140 (144)
211 PF03452 Anp1: Anp1; InterPro 20.0 5.5E+02 0.012 29.0 9.2 114 583-698 11-159 (269)
No 1
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.83 E-value=7.4e-20 Score=181.62 Aligned_cols=187 Identities=17% Similarity=0.274 Sum_probs=134.3
Q ss_pred CcEEEEEEcCCch-h-HHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhc--CCCceEEEecCCCcccccchhhhh
Q 046508 176 PKVTVILNHFKRK-T-LCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSY--NDSRISFISSSYDFKYYGRFQMAL 251 (932)
Q Consensus 176 ~~VtaVVvTYNR~-~-L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~--~~~~i~~i~~~~N~GgaGgF~~a~ 251 (932)
|+|++|||+||+. . |.+||++|++|+++..+||||||||+|++ +.++++++ ++.+++++..+.|.|.+.+++.++
T Consensus 1 p~vsiii~~~n~~~~~l~~~l~sl~~q~~~~~eiivvd~gs~d~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~ 79 (202)
T cd04184 1 PLISIVMPVYNTPEKYLREAIESVRAQTYPNWELCIADDASTDPE-VKRVLKKYAAQDPRIKVVFREENGGISAATNSAL 79 (202)
T ss_pred CeEEEEEecccCcHHHHHHHHHHHHhCcCCCeEEEEEeCCCCChH-HHHHHHHHHhcCCCEEEEEcccCCCHHHHHHHHH
Confidence 4799999999997 6 99999999999999899999999999975 67788765 446799999999999877777665
Q ss_pred h-cCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcCCCCCCCCcccc
Q 046508 252 Q-TEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVD 330 (932)
Q Consensus 252 ~-~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~~~~~ 330 (932)
+ +.+||+++||+|+++.|++|+++++....+.....+.|..... ..+ ...++.... + ..+..
T Consensus 80 ~~a~~d~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~----~~~--~~~~~~~~~-------~----~~~~~ 142 (202)
T cd04184 80 ELATGEFVALLDHDDELAPHALYEVVKALNEHPDADLIYSDEDKI----DEG--GKRSEPFFK-------P----DWSPD 142 (202)
T ss_pred HhhcCCEEEEECCCCcCChHHHHHHHHHHHhCCCCCEEEccHHhc----cCC--CCEeccccC-------C----CCCHH
Confidence 5 7899999999999999999999997752111111111111100 011 111110000 0 11222
Q ss_pred ceEEeccccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeeec
Q 046508 331 KIVQVDFLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 331 rl~~~d~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
.+...++.+++++++|+.++.. |+|. +..+||..|+..+++ +|...+.+|
T Consensus 143 ~~~~~~~~~~~~~~~r~~~~~iggf~~~---~~~~eD~~l~~rl~~-~g~~~~~~~ 194 (202)
T cd04184 143 LLLSQNYIGHLLVYRRSLVRQVGGFREG---FEGAQDYDLVLRVSE-HTDRIAHIP 194 (202)
T ss_pred HhhhcCCccceEeEEHHHHHHhCCCCcC---cccchhHHHHHHHHh-ccceEEEcc
Confidence 3345578899999999999886 7775 235799999999987 688776655
No 2
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.81 E-value=3.2e-19 Score=193.11 Aligned_cols=200 Identities=20% Similarity=0.326 Sum_probs=138.0
Q ss_pred CCcEEEEEEcCCchh-HHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCCcccccchhhhhh-
Q 046508 175 RPKVTVILNHFKRKT-LCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYDFKYYGRFQMALQ- 252 (932)
Q Consensus 175 ~~~VtaVVvTYNR~~-L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N~GgaGgF~~a~~- 252 (932)
.++|++|||||||.. |.+||++|.+|+.+..+|+++||+|+|++ .+.+++...++++++.+++|+|+||||+.++.
T Consensus 2 ~~~i~~iiv~yn~~~~l~~~l~~l~~~~~~~~~iv~vDn~s~d~~--~~~~~~~~~~~v~~i~~~~NlG~agg~n~g~~~ 79 (305)
T COG1216 2 MPKISIIIVTYNRGEDLVECLASLAAQTYPDDVIVVVDNGSTDGS--LEALKARFFPNVRLIENGENLGFAGGFNRGIKY 79 (305)
T ss_pred CcceEEEEEecCCHHHHHHHHHHHhcCCCCCcEEEEccCCCCCCC--HHHHHhhcCCcEEEEEcCCCccchhhhhHHHHH
Confidence 468999999999975 99999999999999999999999999986 78887754578999999999999999997544
Q ss_pred c--C-CcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCccccc-ccccccCcCCCCCCCCc-
Q 046508 253 T--E-ADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRK-FRSKEAGLYLPDPAYDI- 327 (932)
Q Consensus 253 ~--~-~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~-~~s~~~g~~~p~~~y~~- 327 (932)
+ . ++|+.+++||+++++++|++|++++. .....|..|..+...+... +...+. ..+...+.+.+......
T Consensus 80 a~~~~~~~~l~LN~D~~~~~~~l~~ll~~~~----~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (305)
T COG1216 80 ALAKGDDYVLLLNPDTVVEPDLLEELLKAAE----EDPAAGVVGPLIRNYDESL-YIDRRGGESDGLTGGWRASPLLEIA 154 (305)
T ss_pred HhcCCCcEEEEEcCCeeeChhHHHHHHHHHH----hCCCCeEeeeeEecCCCCc-chheeccccccccccceeccccccc
Confidence 2 2 33999999999999999999998865 2223334455433211100 000000 00000000011000010
Q ss_pred --cccceEEe-ccccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeeec
Q 046508 328 --TVDKIVQV-DFLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 328 --~~~rl~~~-d~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
........ ++.|+.++++|++++.. |+|+ .+.=.||..||..+++ +|.+++.+|
T Consensus 155 ~~~~~~~~~~~~~~G~~~li~~~~~~~vG~~de~--~F~y~eD~D~~~R~~~-~G~~i~~~p 213 (305)
T COG1216 155 PDLSSYLEVVASLSGACLLIRREAFEKVGGFDER--FFIYYEDVDLCLRARK-AGYKIYYVP 213 (305)
T ss_pred ccccchhhhhhhcceeeeEEcHHHHHHhCCCCcc--cceeehHHHHHHHHHH-cCCeEEEee
Confidence 01111112 47788889999999999 7884 3455688889999999 998887554
No 3
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.77 E-value=2.7e-18 Score=170.63 Aligned_cols=187 Identities=19% Similarity=0.194 Sum_probs=126.0
Q ss_pred EEEEEcCCch---hHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhc-CCCceEEEecCCCcccccchhhhhh-c
Q 046508 179 TVILNHFKRK---TLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSY-NDSRISFISSSYDFKYYGRFQMALQ-T 253 (932)
Q Consensus 179 taVVvTYNR~---~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~-~~~~i~~i~~~~N~GgaGgF~~a~~-~ 253 (932)
++||||||+. .|.+||++|++|+++..+||||||||+++ +|.++++++ .+..++++..+.|.|.+++++.+++ +
T Consensus 1 sviip~~n~~~~~~l~~~l~Sl~~q~~~~~eiiivdd~ss~d-~t~~~~~~~~~~~~i~~i~~~~n~G~~~a~N~g~~~a 79 (201)
T cd04195 1 SVLMSVYIKEKPEFLREALESILKQTLPPDEVVLVKDGPVTQ-SLNEVLEEFKRKLPLKVVPLEKNRGLGKALNEGLKHC 79 (201)
T ss_pred CEEEEccccchHHHHHHHHHHHHhcCCCCcEEEEEECCCCch-hHHHHHHHHHhcCCeEEEEcCccccHHHHHHHHHHhc
Confidence 5899999995 59999999999999989999999999554 368999987 3334999999999997777777655 7
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcCCCCCCCCccccceE
Q 046508 254 EADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIV 333 (932)
Q Consensus 254 ~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~~~~~rl~ 333 (932)
++|||+++|+|+++.|++|+.++.....+ .+ +-...|....+. .++.-..-+. .|....+.......
T Consensus 80 ~gd~i~~lD~Dd~~~~~~l~~~~~~~~~~--~~-~~~~~~~~~~~~-~~~~~~~~~~---------~~~~~~~~~~~~~~ 146 (201)
T cd04195 80 TYDWVARMDTDDISLPDRFEKQLDFIEKN--PE-IDIVGGGVLEFD-SDGNDIGKRR---------LPTSHDDILKFARR 146 (201)
T ss_pred CCCEEEEeCCccccCcHHHHHHHHHHHhC--CC-eEEEcccEEEEC-CCCCeecccc---------CCCCHHHHHHHhcc
Confidence 89999999999999999999999764311 11 111233332221 1110000000 01110111000011
Q ss_pred EeccccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeeec
Q 046508 334 QVDFLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 334 ~~d~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
..-+.+.++++||+.++.. |.+. .-+||+.|+..+.+ +|.+++.+|
T Consensus 147 ~~~~~~~~~~~rr~~~~~~g~~~~~----~~~eD~~~~~r~~~-~g~~~~~~~ 194 (201)
T cd04195 147 RSPFNHPTVMFRKSKVLAVGGYQDL----PLVEDYALWARMLA-NGARFANLP 194 (201)
T ss_pred CCCCCChHHhhhHHHHHHcCCcCCC----CCchHHHHHHHHHH-cCCceeccc
Confidence 2224466789999998877 4443 34889999889887 788877654
No 4
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.76 E-value=5.1e-18 Score=179.91 Aligned_cols=184 Identities=18% Similarity=0.187 Sum_probs=121.3
Q ss_pred EcCCch--hHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCCcccccchhhhhh----cCCc
Q 046508 183 NHFKRK--TLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYDFKYYGRFQMALQ----TEAD 256 (932)
Q Consensus 183 vTYNR~--~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N~GgaGgF~~a~~----~~~d 256 (932)
|||||. .|++||++|++|+ .+||||||||+|+..+.++++.+ ++|+++++++|.|+||+++.+++ .++|
T Consensus 1 Vtyn~~~~~l~~~l~sl~~q~---~~iiVVDN~S~~~~~~~~~~~~~--~~i~~i~~~~N~G~a~a~N~Gi~~a~~~~~d 75 (281)
T TIGR01556 1 VTFNPDLEHLGELITSLPKQV---DRIIAVDNSPHSDQPLKNARLRG--QKIALIHLGDNQGIAGAQNQGLDASFRRGVQ 75 (281)
T ss_pred CccCccHHHHHHHHHHHHhcC---CEEEEEECcCCCcHhHHHHhccC--CCeEEEECCCCcchHHHHHHHHHHHHHCCCC
Confidence 699994 4999999999996 58999999998753355555443 57999999999999999988754 2799
Q ss_pred EEEEEcCCCCCchhHHHHHHhhccccccccccccccc-cccccCCCCCCCcccccccccccCcCCCCCCCCccccceEEe
Q 046508 257 LVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIG-RILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQV 335 (932)
Q Consensus 257 yVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G-~~vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~~~~~rl~~~ 335 (932)
|||+||||++|.+++|++|++....... -+|..| +++.... ...++..+.........+.. ......+.
T Consensus 76 ~i~~lD~D~~~~~~~l~~l~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 145 (281)
T TIGR01556 76 GVLLLDQDSRPGNAFLAAQWKLLSAENG---QACALGPRFFDRGT-SRRLPAIHLDGLLLRQISLD------GLTTPQKT 145 (281)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHhcCC---ceEEECCeEEcCCC-cccCCceeecccceeeeccc------ccCCceec
Confidence 9999999999999999999976431110 122222 2211100 00111110000000000000 01122334
Q ss_pred cc-ccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeeec
Q 046508 336 DF-LSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 336 d~-l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
++ ++++++++|+.++.. |+|.-+-+ ++|..+|+.+++ +|..++.+|
T Consensus 146 ~~~~~sg~li~~~~~~~iG~fde~~fi~--~~D~e~~~R~~~-~G~~i~~~~ 194 (281)
T TIGR01556 146 SFLISSGCLITREVYQRLGMMDEELFID--HVDTEWSLRAQN-YGIPLYIDP 194 (281)
T ss_pred cEEEcCcceeeHHHHHHhCCccHhhccc--chHHHHHHHHHH-CCCEEEEeC
Confidence 33 567789999999988 88875433 578999999999 898888764
No 5
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.74 E-value=1.6e-17 Score=178.21 Aligned_cols=196 Identities=13% Similarity=0.137 Sum_probs=127.9
Q ss_pred EEEEEcCCch-h-HHHHHHHHHcCCCCC--ceEEEEeCCCCChhhHHHHHhh----cCCCceEEEecCCCcccccchhhh
Q 046508 179 TVILNHFKRK-T-LCAQLDSLLQQTLPF--QHVWVLSFGSPNELSLKRIVNS----YNDSRISFISSSYDFKYYGRFQMA 250 (932)
Q Consensus 179 taVVvTYNR~-~-L~e~L~aLl~QT~~~--~~IiVvdnaStD~t~t~~~l~~----~~~~~i~~i~~~~N~GgaGgF~~a 250 (932)
++||||||+. . |.+||++|++||.+. .|||||||||+|+| .+++.+ ...++++++.++.|.|.+++.+.+
T Consensus 1 SIIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t--~~~~~~~~~~~~~~~v~vi~~~~n~G~~~a~N~g 78 (299)
T cd02510 1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPE--LKLLLEEYYKKYLPKVKVLRLKKREGLIRARIAG 78 (299)
T ss_pred CEEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchH--HHHHHHHHHhhcCCcEEEEEcCCCCCHHHHHHHH
Confidence 5899999998 6 999999999999863 59999999999986 566543 234689999999999966655555
Q ss_pred -hhcCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCccccc-------ccccccCcCCCC
Q 046508 251 -LQTEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRK-------FRSKEAGLYLPD 322 (932)
Q Consensus 251 -~~~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~-------~~s~~~g~~~p~ 322 (932)
.++.+|||.+||+|+++.++||++|++....+. ..++| |.+.........+..... |.-. ..+.+.
T Consensus 79 ~~~A~gd~i~fLD~D~~~~~~wL~~ll~~l~~~~--~~~v~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 152 (299)
T cd02510 79 ARAATGDVLVFLDSHCEVNVGWLEPLLARIAENR--KTVVC--PIIDVIDADTFEYRGSSGDARGGFDWSLH--FKWLPL 152 (299)
T ss_pred HHHccCCEEEEEeCCcccCccHHHHHHHHHHhCC--CeEEE--eeeccccCCCeeEecCCCceeEEecccce--eccccC
Confidence 458999999999999999999999998754221 11221 222111011111111100 0000 000000
Q ss_pred C-CC--CccccceEEeccc-cccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeeec
Q 046508 323 P-AY--DITVDKIVQVDFL-SSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 323 ~-~y--~~~~~rl~~~d~l-~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
. .+ ........+++.+ |+++++||++++.+ |+|.-..|. +||..||..+++ +|..++++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~vGgfDe~~~~~~-~ED~Dl~~R~~~-~G~~i~~~p 218 (299)
T cd02510 153 PEEERRRESPTAPIRSPTMAGGLFAIDREWFLELGGYDEGMDIWG-GENLELSFKVWQ-CGGSIEIVP 218 (299)
T ss_pred CHHHhhhcCCCCCccCccccceeeEEEHHHHHHhCCCCCcccccC-chhHHHHHHHHH-cCCeEEEee
Confidence 0 00 0001122344554 66777999999998 998744333 589999999999 888887664
No 6
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.74 E-value=2.5e-17 Score=164.53 Aligned_cols=156 Identities=24% Similarity=0.346 Sum_probs=118.5
Q ss_pred EEEEcCCchh-HHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCC-CceEEEecCCCcccccchhhhh----hc
Q 046508 180 VILNHFKRKT-LCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYND-SRISFISSSYDFKYYGRFQMAL----QT 253 (932)
Q Consensus 180 aVVvTYNR~~-L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~-~~i~~i~~~~N~GgaGgF~~a~----~~ 253 (932)
|||||||+.. |++||++|++|+.+..+|||+||+|+|+| .++++++.. ..++++..++|.|.+++++.++ .+
T Consensus 1 viI~~~n~~~~l~~~l~sl~~q~~~~~eiiivD~~s~d~t--~~~~~~~~~~~~i~~~~~~~n~g~~~~~n~~~~~a~~~ 78 (202)
T cd04185 1 AVVVTYNRLDLLKECLDALLAQTRPPDHIIVIDNASTDGT--AEWLTSLGDLDNIVYLRLPENLGGAGGFYEGVRRAYEL 78 (202)
T ss_pred CEEEeeCCHHHHHHHHHHHHhccCCCceEEEEECCCCcch--HHHHHHhcCCCceEEEECccccchhhHHHHHHHHHhcc
Confidence 6999999975 99999999999999999999999999975 899988732 3489999999999887776654 35
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcCCCCCCCCccccceE
Q 046508 254 EADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIV 333 (932)
Q Consensus 254 ~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~~~~~rl~ 333 (932)
++||+++||||+++.+++|++++.... .+.+ |.+.|.... + + .
T Consensus 79 ~~d~v~~ld~D~~~~~~~l~~l~~~~~----~~~~----~~~~~~~~~-------------------~----~--~---- 121 (202)
T cd04185 79 GYDWIWLMDDDAIPDPDALEKLLAYAD----KDNP----QFLAPLVLD-------------------P----D--G---- 121 (202)
T ss_pred CCCEEEEeCCCCCcChHHHHHHHHHHh----cCCc----eEecceeEc-------------------C----C--C----
Confidence 799999999999999999999987643 2211 111121000 0 0 0
Q ss_pred EeccccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCee
Q 046508 334 QVDFLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSF 381 (932)
Q Consensus 334 ~~d~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~ 381 (932)
.+++++++|++++.. |.|.-+. -+||..+|..+++ +|..+|
T Consensus 122 ----~~~~~~~~~~~~~~~g~~~~~~~~--~~eD~~~~~r~~~-~G~~i~ 164 (202)
T cd04185 122 ----SFVGVLISRRVVEKIGLPDKEFFI--WGDDTEYTLRASK-AGPGIY 164 (202)
T ss_pred ----ceEEEEEeHHHHHHhCCCChhhhc--cchHHHHHHHHHH-cCCcEE
Confidence 345689999999987 4554222 3689999999999 787773
No 7
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.73 E-value=9.2e-18 Score=169.97 Aligned_cols=194 Identities=19% Similarity=0.182 Sum_probs=127.1
Q ss_pred CcEEEEEEcCCch--hHHHHHHHHHcCCCCC--ceEEEEeCCCCChhhHHHHHhhc-CCCceEEEecCCCccc-ccchhh
Q 046508 176 PKVTVILNHFKRK--TLCAQLDSLLQQTLPF--QHVWVLSFGSPNELSLKRIVNSY-NDSRISFISSSYDFKY-YGRFQM 249 (932)
Q Consensus 176 ~~VtaVVvTYNR~--~L~e~L~aLl~QT~~~--~~IiVvdnaStD~t~t~~~l~~~-~~~~i~~i~~~~N~Gg-aGgF~~ 249 (932)
|+|++|||+||+. .|++||++|++|+++. .+||||||+|+|+| .++++++ ...+++++..+.|.|+ +|+++.
T Consensus 1 p~vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 78 (234)
T cd06421 1 PTVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPEL--RALAAELGVEYGYRYLTRPDNRHAKAGNLNN 78 (234)
T ss_pred CceEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhH--HHHHHHhhcccCceEEEeCCCCCCcHHHHHH
Confidence 5799999999984 4999999999999987 69999999999975 8999887 3346788888888886 555677
Q ss_pred hhh-cCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcCCCCCCCCcc
Q 046508 250 ALQ-TEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDIT 328 (932)
Q Consensus 250 a~~-~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~~~ 328 (932)
+++ +++|||+++|||+++.|++|++++.....+ +.+-+..|...-.. .+..-...+.+.... ..+.+. ....
T Consensus 79 ~~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~---~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~--~~~~ 151 (234)
T cd06421 79 ALAHTTGDFVAILDADHVPTPDFLRRTLGYFLDD---PKVALVQTPQFFYN-PDPFDWLADGAPNEQ-ELFYGV--IQPG 151 (234)
T ss_pred HHHhCCCCEEEEEccccCcCccHHHHHHHHHhcC---CCeEEEecceEEec-CCcchhHHHHHHHHH-HHHHHH--HHHH
Confidence 766 689999999999999999999999875411 11212223221111 111000000000000 000000 0000
Q ss_pred ccceEEeccccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeee
Q 046508 329 VDKIVQVDFLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVL 383 (932)
Q Consensus 329 ~~rl~~~d~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vl 383 (932)
-......-+.|+++++||++++.+ |.|..+ +||+.|+..+++ +|..+..+
T Consensus 152 ~~~~~~~~~~g~~~~~r~~~~~~ig~~~~~~~----~eD~~l~~r~~~-~g~~i~~~ 203 (234)
T cd06421 152 RDRWGAAFCCGSGAVVRREALDEIGGFPTDSV----TEDLATSLRLHA-KGWRSVYV 203 (234)
T ss_pred HhhcCCceecCceeeEeHHHHHHhCCCCccce----eccHHHHHHHHH-cCceEEEe
Confidence 000011234577999999999987 555433 689999999998 77776543
No 8
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.73 E-value=4.2e-17 Score=164.01 Aligned_cols=158 Identities=14% Similarity=0.110 Sum_probs=118.7
Q ss_pred CcEEEEEEcCCch-hHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhc----CCCceEEEecCCCccccc---ch
Q 046508 176 PKVTVILNHFKRK-TLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSY----NDSRISFISSSYDFKYYG---RF 247 (932)
Q Consensus 176 ~~VtaVVvTYNR~-~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~----~~~~i~~i~~~~N~GgaG---gF 247 (932)
|+|++|||+||.. .|.+||++|++|+++..+||||||+|+|+| .++++++ ...+++++..+.|.|.+| +.
T Consensus 1 p~vsviip~~n~~~~l~~~L~sl~~q~~~~~eiivVdd~s~d~t--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 78 (196)
T cd02520 1 PGVSILKPLCGVDPNLYENLESFFQQDYPKYEILFCVQDEDDPA--IPVVRKLIAKYPNVDARLLIGGEKVGINPKVNNL 78 (196)
T ss_pred CCeEEEEecCCCCccHHHHHHHHHhccCCCeEEEEEeCCCcchH--HHHHHHHHHHCCCCcEEEEecCCcCCCCHhHHHH
Confidence 5799999999997 499999999999999999999999999985 7888765 223577888888877543 22
Q ss_pred hhhhh-cCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcCCCCCCCC
Q 046508 248 QMALQ-TEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYD 326 (932)
Q Consensus 248 ~~a~~-~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~ 326 (932)
+.+++ +.+||++++|+|+++.|++|++++.... + +.+-+..|.
T Consensus 79 n~g~~~a~~d~i~~~D~D~~~~~~~l~~l~~~~~-~---~~~~~v~~~-------------------------------- 122 (196)
T cd02520 79 IKGYEEARYDILVISDSDISVPPDYLRRMVAPLM-D---PGVGLVTCL-------------------------------- 122 (196)
T ss_pred HHHHHhCCCCEEEEECCCceEChhHHHHHHHHhh-C---CCCCeEEee--------------------------------
Confidence 34544 7899999999999999999999986532 1 111010111
Q ss_pred ccccceEEeccccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeee
Q 046508 327 ITVDKIVQVDFLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVL 383 (932)
Q Consensus 327 ~~~~rl~~~d~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vl 383 (932)
-..+++++++|++++.. |++.+ ...+||+.|+..+++ +|.++..+
T Consensus 123 ---------~~~g~~~~~r~~~~~~~ggf~~~~--~~~~eD~~l~~rl~~-~G~~i~~~ 169 (196)
T cd02520 123 ---------CAFGKSMALRREVLDAIGGFEAFA--DYLAEDYFLGKLIWR-LGYRVVLS 169 (196)
T ss_pred ---------cccCceeeeEHHHHHhccChHHHh--HHHHHHHHHHHHHHH-cCCeEEEc
Confidence 23457899999999987 54422 223689999999988 78888644
No 9
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.72 E-value=4.6e-17 Score=166.98 Aligned_cols=192 Identities=18% Similarity=0.184 Sum_probs=123.9
Q ss_pred CcEEEEEEcCCchh-HHHHHHHHHcCCCCC--ceEEEEeCCCCChhhHHHHHhhc------CCCceEEEecCCCccc-cc
Q 046508 176 PKVTVILNHFKRKT-LCAQLDSLLQQTLPF--QHVWVLSFGSPNELSLKRIVNSY------NDSRISFISSSYDFKY-YG 245 (932)
Q Consensus 176 ~~VtaVVvTYNR~~-L~e~L~aLl~QT~~~--~~IiVvdnaStD~t~t~~~l~~~------~~~~i~~i~~~~N~Gg-aG 245 (932)
|+|++|||+||... |.+||++|++|+++. .+|||+|| |+|+| .+++++. ...+++++....|.|+ ++
T Consensus 1 p~vSViIp~yNe~~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t--~~~~~~~~~~~~~~~~~i~~~~~~~~~G~k~~ 77 (232)
T cd06437 1 PMVTVQLPVFNEKYVVERLIEAACALDYPKDRLEIQVLDD-STDET--VRLAREIVEEYAAQGVNIKHVRRADRTGYKAG 77 (232)
T ss_pred CceEEEEecCCcHHHHHHHHHHHHhcCCCccceEEEEEEC-CCCcH--HHHHHHHHHHHhhcCCceEEEECCCCCCCchH
Confidence 47999999999975 999999999999985 47889987 99975 7777653 2457888888878885 44
Q ss_pred chhhhhh-cCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcc-cccccccccCcCCCCC
Q 046508 246 RFQMALQ-TEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPS-YRKFRSKEAGLYLPDP 323 (932)
Q Consensus 246 gF~~a~~-~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~-y~~~~s~~~g~~~p~~ 323 (932)
..+.++. +++|||++||.|+++.|++|+++..... + +.+-+..|+...+. .+.+|-. +..+... .. ....
T Consensus 78 a~n~g~~~a~~~~i~~~DaD~~~~~~~l~~~~~~~~-~---~~v~~v~~~~~~~~-~~~~~~~~~~~~~~~--~~-~~~~ 149 (232)
T cd06437 78 ALAEGMKVAKGEYVAIFDADFVPPPDFLQKTPPYFA-D---PKLGFVQTRWGHIN-ANYSLLTRVQAMSLD--YH-FTIE 149 (232)
T ss_pred HHHHHHHhCCCCEEEEEcCCCCCChHHHHHhhhhhc-C---CCeEEEecceeeEc-CCCchhhHhhhhhHH--hh-hhHh
Confidence 5555544 7899999999999999999999765432 1 22223334432221 2222211 1000000 00 0000
Q ss_pred CCCccccceEEeccccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeeec
Q 046508 324 AYDITVDKIVQVDFLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 324 ~y~~~~~rl~~~d~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
.+.. .......-+.+++.++||++++.+ |++.. ..||+.|+..+++ +|.++..+|
T Consensus 150 ~~~~-~~~~~~~~~~g~~~~~rr~~~~~vgg~~~~~----~~ED~~l~~rl~~-~G~~~~~~~ 206 (232)
T cd06437 150 QVAR-SSTGLFFNFNGTAGVWRKECIEDAGGWNHDT----LTEDLDLSYRAQL-KGWKFVYLD 206 (232)
T ss_pred HhhH-hhcCCeEEeccchhhhhHHHHHHhCCCCCCc----chhhHHHHHHHHH-CCCeEEEec
Confidence 0000 000111234577789999999997 76643 2699999999987 787775443
No 10
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.71 E-value=1.1e-16 Score=156.51 Aligned_cols=183 Identities=19% Similarity=0.193 Sum_probs=123.6
Q ss_pred EEEEEcCCchh-HHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCCcccccchhhhhh-cCCc
Q 046508 179 TVILNHFKRKT-LCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYDFKYYGRFQMALQ-TEAD 256 (932)
Q Consensus 179 taVVvTYNR~~-L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N~GgaGgF~~a~~-~~~d 256 (932)
++||+|||+.. |.+||++|++|+++..+||||||+|+|++ .++++++... +.++....|.|.++..+.|++ +.+|
T Consensus 1 sivi~~~n~~~~l~~~l~sl~~q~~~~~evivvDd~s~d~~--~~~~~~~~~~-~~~~~~~~~~g~~~a~n~~~~~a~~~ 77 (202)
T cd06433 1 SIITPTYNQAETLEETIDSVLSQTYPNIEYIVIDGGSTDGT--VDIIKKYEDK-ITYWISEPDKGIYDAMNKGIALATGD 77 (202)
T ss_pred CEEEeccchHHHHHHHHHHHHhCCCCCceEEEEeCCCCccH--HHHHHHhHhh-cEEEEecCCcCHHHHHHHHHHHcCCC
Confidence 58999999975 99999999999998899999999999985 8999888544 456666788897777777655 7899
Q ss_pred EEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcCCCCCCCCccccceEEec
Q 046508 257 LVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQVD 336 (932)
Q Consensus 257 yVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~~~~~rl~~~d 336 (932)
||+++|||+++.+++++++++..... .+ .-...|....+ ..+......+. . . ...........-
T Consensus 78 ~v~~ld~D~~~~~~~~~~~~~~~~~~--~~-~~~v~g~~~~~-~~~~~~~~~~~--~-~---------~~~~~~~~~~~~ 141 (202)
T cd06433 78 IIGFLNSDDTLLPGALLAVVAAFAEH--PE-VDVVYGDVLLV-DENGRVIGRRR--P-P---------PFLDKFLLYGMP 141 (202)
T ss_pred EEEEeCCCcccCchHHHHHHHHHHhC--CC-ccEEEeeeEEE-cCCCCcccCCC--C-c---------chhhhHHhhcCc
Confidence 99999999999999999998433211 11 11122333211 11111111110 0 0 000111112223
Q ss_pred cccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeeec
Q 046508 337 FLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 337 ~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
+.+++++++|++++.+ |.|.-. -++|..|+..+++ .|..++.+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~f~~~~~---~~~D~~~~~r~~~-~g~~~~~~~ 187 (202)
T cd06433 142 ICHQATFFRRSLFEKYGGFDESYR---IAADYDLLLRLLL-AGKIFKYLP 187 (202)
T ss_pred ccCcceEEEHHHHHHhCCCchhhC---chhhHHHHHHHHH-cCCceEecc
Confidence 4456788999999888 666522 2578899989999 787776443
No 11
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.70 E-value=1.2e-16 Score=159.09 Aligned_cols=189 Identities=19% Similarity=0.180 Sum_probs=122.2
Q ss_pred EEEEEcCCchh-HHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCC---CceEEEecCCCcccccchhhhhh-c
Q 046508 179 TVILNHFKRKT-LCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYND---SRISFISSSYDFKYYGRFQMALQ-T 253 (932)
Q Consensus 179 taVVvTYNR~~-L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~---~~i~~i~~~~N~GgaGgF~~a~~-~ 253 (932)
++|||||||.. |.+||++|++|+++..|||||||||+|+| .++++++.. ..++++..+.|.|.++..+.++. +
T Consensus 1 sIvIp~yn~~~~l~~~l~sl~~q~~~~~eiiVvddgS~d~t--~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~n~g~~~~ 78 (214)
T cd04196 1 AVLMATYNGEKYLREQLDSILAQTYKNDELIISDDGSTDGT--VEIIKEYIDKDPFIIILIRNGKNLGVARNFESLLQAA 78 (214)
T ss_pred CEEEEecCcHHHHHHHHHHHHhCcCCCeEEEEEeCCCCCCc--HHHHHHHHhcCCceEEEEeCCCCccHHHHHHHHHHhC
Confidence 58999999975 99999999999999889999999999975 899988732 36888999999998887776655 7
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcCCCCCCCCccccceE
Q 046508 254 EADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIV 333 (932)
Q Consensus 254 ~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~~~~~rl~ 333 (932)
++|||+++|+|+++.|++|+++++....+. ...++ .|...-+. .+........+... +. .+ ...-.....
T Consensus 79 ~g~~v~~ld~Dd~~~~~~l~~~~~~~~~~~-~~~~~--~~~~~~~~-~~~~~~~~~~~~~~--~~-~~---~~~~~~~~~ 148 (214)
T cd04196 79 DGDYVFFCDQDDIWLPDKLERLLKAFLKDD-KPLLV--YSDLELVD-ENGNPIGESFFEYQ--KI-KP---GTSFNNLLF 148 (214)
T ss_pred CCCEEEEECCCcccChhHHHHHHHHHhcCC-CceEE--ecCcEEEC-CCCCCccccccccc--cc-CC---ccCHHHHHH
Confidence 899999999999999999999997622111 11122 22221110 11100000000000 00 00 000011112
Q ss_pred EeccccccccccHHHHHHhh--ccCCCcccchhhHHHHHHHHHhcCCCeeeec
Q 046508 334 QVDFLSSSWFLSAELVKTLF--IETPFTFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 334 ~~d~l~~~wf~~re~l~~~f--~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
..-+.+++++++|++++... .+.. ...+|+.+...+++ +-+.+.+|
T Consensus 149 ~~~~~~~~~~~r~~~~~~~~~~~~~~---~~~~D~~~~~~~~~--~~~~~~~~ 196 (214)
T cd04196 149 QNVVTGCTMAFNRELLELALPFPDAD---VIMHDWWLALLASA--FGKVVFLD 196 (214)
T ss_pred hCccCCceeeEEHHHHHhhccccccc---cccchHHHHHHHHH--cCceEEcc
Confidence 23456788899999998873 3321 33678888766666 33555443
No 12
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.70 E-value=9.4e-17 Score=165.63 Aligned_cols=186 Identities=17% Similarity=0.239 Sum_probs=125.2
Q ss_pred CCCcEEEEEEcCCchh-HHHHHHHHHcCCCCC--ceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCCcccccchhhh
Q 046508 174 NRPKVTVILNHFKRKT-LCAQLDSLLQQTLPF--QHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYDFKYYGRFQMA 250 (932)
Q Consensus 174 ~~~~VtaVVvTYNR~~-L~e~L~aLl~QT~~~--~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N~GgaGgF~~a 250 (932)
..++|++|||+||+.. |.+||+++++|+++. .||||+||+|+|+| .++++++...+++++..+.|.|.++..+.+
T Consensus 27 ~~~~isVvip~~n~~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t--~~~~~~~~~~~v~~i~~~~~~g~~~a~n~g 104 (251)
T cd06439 27 YLPTVTIIIPAYNEEAVIEAKLENLLALDYPRDRLEIIVVSDGSTDGT--AEIAREYADKGVKLLRFPERRGKAAALNRA 104 (251)
T ss_pred CCCEEEEEEecCCcHHHHHHHHHHHHhCcCCCCcEEEEEEECCCCccH--HHHHHHHhhCcEEEEEcCCCCChHHHHHHH
Confidence 6678999999999975 999999999999876 69999999999975 889988744479999999999987777776
Q ss_pred hh-cCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCC--CCCcccccccccccCcCCCCCCCCc
Q 046508 251 LQ-TEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKD--FTFPSYRKFRSKEAGLYLPDPAYDI 327 (932)
Q Consensus 251 ~~-~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d--~~f~~y~~~~s~~~g~~~p~~~y~~ 327 (932)
++ +.+|||++||+|+++.+++|+++++... + +.+-+..|......... .....|..+...... +.
T Consensus 105 i~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~-~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------ 172 (251)
T cd06439 105 LALATGEIVVFTDANALLDPDALRLLVRHFA-D---PSVGAVSGELVIVDGGGSGSGEGLYWKYENWLKR--AE------ 172 (251)
T ss_pred HHHcCCCEEEEEccccCcCHHHHHHHHHHhc-C---CCccEEEeEEEecCCcccchhHHHHHHHHHHHHH--HH------
Confidence 55 6799999999999999999999997753 1 22333334443321110 111111111110000 00
Q ss_pred cccceE-EeccccccccccHHHHHHhhccCCCcccchhhHHHHHHHHHhcCCCee
Q 046508 328 TVDKIV-QVDFLSSSWFLSAELVKTLFIETPFTFMTGEDLHLSYQLQKYRNAGSF 381 (932)
Q Consensus 328 ~~~rl~-~~d~l~~~wf~~re~l~~~f~E~~~~~~t~eDlhLs~~~~ky~~i~~~ 381 (932)
.++. .....|...+++|+.++. |.+. .-.||+.|+..+++ .|.++.
T Consensus 173 --~~~~~~~~~~g~~~~~rr~~~~~-~~~~----~~~eD~~l~~~~~~-~G~~~~ 219 (251)
T cd06439 173 --SRLGSTVGANGAIYAIRRELFRP-LPAD----TINDDFVLPLRIAR-QGYRVV 219 (251)
T ss_pred --HhcCCeeeecchHHHhHHHHhcC-CCcc----cchhHHHHHHHHHH-cCCeEE
Confidence 0011 122334444588888872 2222 23689999889988 777774
No 13
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.70 E-value=2.6e-16 Score=170.14 Aligned_cols=106 Identities=17% Similarity=0.235 Sum_probs=92.8
Q ss_pred CCCcEEEEEEcCCchh-HHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCCcccccchhhhhh
Q 046508 174 NRPKVTVILNHFKRKT-LCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYDFKYYGRFQMALQ 252 (932)
Q Consensus 174 ~~~~VtaVVvTYNR~~-L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N~GgaGgF~~a~~ 252 (932)
+.|.|++||||||+.. |.+||+++++||++..|||||||||+|.+.+.++++++.+.+|+++.++.|.|.++..+.+++
T Consensus 3 ~~p~VSVIip~yN~~~~l~~~l~Svl~Qt~~~~EiIVVDDgS~~~~~~~~~~~~~~~~ri~~i~~~~n~G~~~a~N~gi~ 82 (279)
T PRK10018 3 DNPLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMIIVDDCSTSWEQLQQYVTALNDPRITYIHNDINSGACAVRNQAIM 82 (279)
T ss_pred CCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCCHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHH
Confidence 4678999999999975 999999999999999999999999997544567777777789999999999997776666655
Q ss_pred -cCCcEEEEEcCCCCCchhHHHHHHhhc
Q 046508 253 -TEADLVYIVDDDMIPGRKMLQILSHVA 279 (932)
Q Consensus 253 -~~~dyVwimDDD~IP~~~~Le~Ll~~~ 279 (932)
+.+|||++||+|+++.|++|+.+++..
T Consensus 83 ~a~g~~I~~lDaDD~~~p~~l~~~~~~~ 110 (279)
T PRK10018 83 LAQGEYITGIDDDDEWTPNRLSVFLAHK 110 (279)
T ss_pred HcCCCEEEEECCCCCCCccHHHHHHHHH
Confidence 889999999999999999999998754
No 14
>PRK11204 N-glycosyltransferase; Provisional
Probab=99.69 E-value=2.3e-16 Score=176.88 Aligned_cols=190 Identities=12% Similarity=0.146 Sum_probs=134.4
Q ss_pred CCCcEEEEEEcCCchh-HHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhc--CCCceEEEecCCCcccccchhhh
Q 046508 174 NRPKVTVILNHFKRKT-LCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSY--NDSRISFISSSYDFKYYGRFQMA 250 (932)
Q Consensus 174 ~~~~VtaVVvTYNR~~-L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~--~~~~i~~i~~~~N~GgaGgF~~a 250 (932)
+.|+|++|||+||+.. +++||+++++|++|..||+||||||+|+| .++++++ ..+++++++.++|.|.+++.+.+
T Consensus 52 ~~p~vsViIp~yne~~~i~~~l~sl~~q~yp~~eiiVvdD~s~d~t--~~~l~~~~~~~~~v~~i~~~~n~Gka~aln~g 129 (420)
T PRK11204 52 EYPGVSILVPCYNEGENVEETISHLLALRYPNYEVIAINDGSSDNT--GEILDRLAAQIPRLRVIHLAENQGKANALNTG 129 (420)
T ss_pred CCCCEEEEEecCCCHHHHHHHHHHHHhCCCCCeEEEEEECCCCccH--HHHHHHHHHhCCcEEEEEcCCCCCHHHHHHHH
Confidence 5678999999999975 99999999999999999999999999985 8888876 34679999999999988888887
Q ss_pred hh-cCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCc-----ccccc-cccccCcCCCCC
Q 046508 251 LQ-TEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFP-----SYRKF-RSKEAGLYLPDP 323 (932)
Q Consensus 251 ~~-~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~-----~y~~~-~s~~~g~~~p~~ 323 (932)
++ +++||++++|+|++|+|++|+++++....+ +.+-+..|...... .+.-++ .|... +.-.... .
T Consensus 130 ~~~a~~d~i~~lDaD~~~~~d~L~~l~~~~~~~---~~v~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~ 201 (420)
T PRK11204 130 AAAARSEYLVCIDGDALLDPDAAAYMVEHFLHN---PRVGAVTGNPRIRN-RSTLLGRIQVGEFSSIIGLIKRAQ----R 201 (420)
T ss_pred HHHcCCCEEEEECCCCCCChhHHHHHHHHHHhC---CCeEEEECCceecc-chhHHHHHHHHHHHHhhhHHHHHH----H
Confidence 66 789999999999999999999998765211 22333344432221 110000 01000 0000000 0
Q ss_pred CCCccccceEEeccccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeeec
Q 046508 324 AYDITVDKIVQVDFLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 324 ~y~~~~~rl~~~d~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
.++ + ...+.|++.++||+.++.. |+|.-. .||+.++..+++ +|.++..+|
T Consensus 202 ~~~----~--~~~~~G~~~~~rr~~l~~vgg~~~~~~----~ED~~l~~rl~~-~G~~i~~~p 253 (420)
T PRK11204 202 VYG----R--VFTVSGVITAFRKSALHEVGYWSTDMI----TEDIDISWKLQL-RGWDIRYEP 253 (420)
T ss_pred HhC----C--ceEecceeeeeeHHHHHHhCCCCCCcc----cchHHHHHHHHH-cCCeEEecc
Confidence 001 0 1123467789999999887 776643 699999999998 888775443
No 15
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.68 E-value=4.5e-16 Score=152.16 Aligned_cols=164 Identities=20% Similarity=0.196 Sum_probs=113.9
Q ss_pred EEEEcCCchh-HHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCC----CceEEEecCCCcccccchhhhhh-c
Q 046508 180 VILNHFKRKT-LCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYND----SRISFISSSYDFKYYGRFQMALQ-T 253 (932)
Q Consensus 180 aVVvTYNR~~-L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~----~~i~~i~~~~N~GgaGgF~~a~~-~ 253 (932)
+|||+||+.. |++||++|++|+.+..+|||+||+|+|+| .++++++.. ..+.+++.+.+.|.+++.+.+++ +
T Consensus 1 ivip~~n~~~~l~~~l~sl~~q~~~~~eiivvdd~s~d~t--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~g~~~a 78 (182)
T cd06420 1 LIITTYNRPEALELVLKSVLNQSILPFEVIIADDGSTEET--KELIEEFKSQFPIPIKHVWQEDEGFRKAKIRNKAIAAA 78 (182)
T ss_pred CEEeecCChHHHHHHHHHHHhccCCCCEEEEEeCCCchhH--HHHHHHHHhhcCCceEEEEcCCcchhHHHHHHHHHHHh
Confidence 5899999975 99999999999998999999999999975 888887622 33445555556665555555544 7
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcCCCCCCCCccccceE
Q 046508 254 EADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIV 333 (932)
Q Consensus 254 ~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~~~~~rl~ 333 (932)
.+|||++||+|++|.+++|+++++... .++...-+++..... + .
T Consensus 79 ~g~~i~~lD~D~~~~~~~l~~~~~~~~-----~~~~v~g~~~~~~~~----------------~---------------~ 122 (182)
T cd06420 79 KGDYLIFIDGDCIPHPDFIADHIELAE-----PGVFLSGSRVLLNEK----------------L---------------T 122 (182)
T ss_pred cCCEEEEEcCCcccCHHHHHHHHHHhC-----CCcEEecceeecccc----------------c---------------c
Confidence 899999999999999999999987642 222221222211100 0 0
Q ss_pred EeccccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeee
Q 046508 334 QVDFLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVL 383 (932)
Q Consensus 334 ~~d~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vl 383 (932)
...+.++++.++|+.+... |.|+...| .+||+.|+.++++ +|++.+.+
T Consensus 123 ~~~~~~~~~~~~r~~~~~~ggf~~~~~~~-~~eD~~l~~r~~~-~g~~~~~~ 172 (182)
T cd06420 123 ERGIRGCNMSFWKKDLLAVNGFDEEFTGW-GGEDSELVARLLN-SGIKFRKL 172 (182)
T ss_pred eeEeccceEEEEHHHHHHhCCCCcccccC-CcchHHHHHHHHH-cCCcEEEe
Confidence 0234455566777766655 66554333 3689999999999 88766554
No 16
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.68 E-value=1e-16 Score=161.62 Aligned_cols=191 Identities=15% Similarity=0.122 Sum_probs=124.8
Q ss_pred EEEEcCCchh-HHHHHHHHHcCCC-CCceEEEEeCCCCChhhHHHHHhhc--CCCceEEEecCCCcccccchhhhhh-cC
Q 046508 180 VILNHFKRKT-LCAQLDSLLQQTL-PFQHVWVLSFGSPNELSLKRIVNSY--NDSRISFISSSYDFKYYGRFQMALQ-TE 254 (932)
Q Consensus 180 aVVvTYNR~~-L~e~L~aLl~QT~-~~~~IiVvdnaStD~t~t~~~l~~~--~~~~i~~i~~~~N~GgaGgF~~a~~-~~ 254 (932)
||||+||+.. |.+||++|++|+. ...|||||||||||+| .++++++ ..++++++....|.|.+++++.+++ +.
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~~~~~eiiiVDd~S~d~t--~~~~~~~~~~~~~i~~~~~~~n~G~~~a~n~g~~~a~ 78 (224)
T cd06442 1 IIIPTYNERENIPELIERLDAALKGIDYEIIVVDDNSPDGT--AEIVRELAKEYPRVRLIVRPGKRGLGSAYIEGFKAAR 78 (224)
T ss_pred CeEeccchhhhHHHHHHHHHHhhcCCCeEEEEEeCCCCCCh--HHHHHHHHHhCCceEEEecCCCCChHHHHHHHHHHcC
Confidence 6899999975 9999999999998 6889999999999985 8888887 3467899999999998887777655 78
Q ss_pred CcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcCCCCCCCCccccceEE
Q 046508 255 ADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQ 334 (932)
Q Consensus 255 ~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~~~~~rl~~ 334 (932)
+|||.+||+|+++.|++|+.+++....... ..+.| ++...- ......+.++++..+.... + .......-.
T Consensus 79 gd~i~~lD~D~~~~~~~l~~l~~~~~~~~~-~~v~g--~~~~~~-~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~ 148 (224)
T cd06442 79 GDVIVVMDADLSHPPEYIPELLEAQLEGGA-DLVIG--SRYVEG-GGVEGWGLKRKLISRGANL-L-----ARLLLGRKV 148 (224)
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHhcCCC-CEEEE--eeeecC-CccCCCcHHHHHHHHHHHH-H-----HHHHcCCCC
Confidence 999999999999999999999986321111 11222 122111 0111122222222111000 0 000001112
Q ss_pred eccccccccccHHHHHHhhccCCCcccchhhHHHHHHHHHhcCCCeeeec
Q 046508 335 VDFLSSSWFLSAELVKTLFIETPFTFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 335 ~d~l~~~wf~~re~l~~~f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
.+..++.++++|+.++.+- |......-.+|+.|+..+.+ .|.++..+|
T Consensus 149 ~~~~~~~~~~~r~~~~~ig-~~~~~~~~~~~~~l~~~~~~-~g~~i~~~p 196 (224)
T cd06442 149 SDPTSGFRAYRREVLEKLI-DSLVSKGYKFQLELLVRARR-LGYRIVEVP 196 (224)
T ss_pred CCCCCccchhhHHHHHHHh-hhccCCCcEEeHHHHHHHHH-cCCeEEEeC
Confidence 3556777789999999886 22111122345557778887 787776655
No 17
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.68 E-value=1.5e-16 Score=159.93 Aligned_cols=187 Identities=13% Similarity=0.078 Sum_probs=117.6
Q ss_pred EEEEcCCchh-HHHHHHHHHcCCCCC--ceEEEEeCCCCChhhHHHHHh-h--cCCCceEEEecC--CCcccccchhhhh
Q 046508 180 VILNHFKRKT-LCAQLDSLLQQTLPF--QHVWVLSFGSPNELSLKRIVN-S--YNDSRISFISSS--YDFKYYGRFQMAL 251 (932)
Q Consensus 180 aVVvTYNR~~-L~e~L~aLl~QT~~~--~~IiVvdnaStD~t~t~~~l~-~--~~~~~i~~i~~~--~N~GgaGgF~~a~ 251 (932)
+||||||+.. |++||++|++|+++. .+||||||+|+|+| .++++ . ....++++++.+ .|.|.+...+.++
T Consensus 1 viip~~n~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t--~~~~~~~~~~~~~~v~~~~~~~~~~~g~~~a~n~g~ 78 (229)
T cd04192 1 VVIAARNEAENLPRLLQSLSALDYPKEKFEVILVDDHSTDGT--VQILEFAAAKPNFQLKILNNSRVSISGKKNALTTAI 78 (229)
T ss_pred CEEEecCcHHHHHHHHHHHHhCCCCCCceEEEEEcCCCCcCh--HHHHHHHHhCCCcceEEeeccCcccchhHHHHHHHH
Confidence 5899999975 999999999999987 89999999999975 88886 2 344678888776 4666555555554
Q ss_pred h-cCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccc-cCcCCCCCCCCccc
Q 046508 252 Q-TEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKE-AGLYLPDPAYDITV 329 (932)
Q Consensus 252 ~-~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~-~g~~~p~~~y~~~~ 329 (932)
. +.+|||+++|+|+++.|++|++++.... .....+..|..+.. ..+.-+..+..+.... .+..........
T Consensus 79 ~~~~~d~i~~~D~D~~~~~~~l~~l~~~~~----~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 151 (229)
T cd04192 79 KAAKGDWIVTTDADCVVPSNWLLTFVAFIQ----KEQIGLVAGPVIYF-KGKSLLAKFQRLDWLSLLGLIAGSFGLGK-- 151 (229)
T ss_pred HHhcCCEEEEECCCcccCHHHHHHHHHHhh----cCCCcEEeeeeeec-CCccHHHHHHHHHHHHHHHHHhhHHHhcC--
Confidence 4 7899999999999999999999997542 11122233443211 1222111111100000 000000000000
Q ss_pred cceEEeccccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCC-Ceee
Q 046508 330 DKIVQVDFLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNA-GSFV 382 (932)
Q Consensus 330 ~rl~~~d~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i-~~~v 382 (932)
..-..+++++++|+.++.. |+|..+.+. +|..++..+.+ .|. +++.
T Consensus 152 ----~~~~~g~~~~~rr~~~~~~ggf~~~~~~~~--eD~~~~~~~~~-~g~~~~~~ 200 (229)
T cd04192 152 ----PFMCNGANMAYRKEAFFEVGGFEGNDHIAS--GDDELLLAKVA-SKYPKVAY 200 (229)
T ss_pred ----ccccccceEEEEHHHHHHhcCCcccccccc--CCHHHHHHHHH-hCCCCEEE
Confidence 0112467789999999998 888755444 44455446666 566 5543
No 18
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.67 E-value=4.6e-16 Score=158.55 Aligned_cols=185 Identities=19% Similarity=0.279 Sum_probs=120.6
Q ss_pred EEEEcCCch-h-HHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCCcccccchhhhhh-c---
Q 046508 180 VILNHFKRK-T-LCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYDFKYYGRFQMALQ-T--- 253 (932)
Q Consensus 180 aVVvTYNR~-~-L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N~GgaGgF~~a~~-~--- 253 (932)
|||||||+. . |.+||++|++| ..+||||||+|+|.+ ..+. ++...+++++..+.|.|.+++++.+++ +
T Consensus 1 ~vI~~yn~~~~~l~~~l~sl~~q---~~~iivvDn~s~~~~--~~~~-~~~~~~i~~i~~~~n~G~~~a~N~g~~~a~~~ 74 (237)
T cd02526 1 AVVVTYNPDLSKLKELLAALAEQ---VDKVVVVDNSSGNDI--ELRL-RLNSEKIELIHLGENLGIAKALNIGIKAALEN 74 (237)
T ss_pred CEEEEecCCHHHHHHHHHHHhcc---CCEEEEEeCCCCccH--HHHh-hccCCcEEEEECCCceehHHhhhHHHHHHHhC
Confidence 689999998 6 99999999999 678999999998864 4443 335578999999999998888877765 3
Q ss_pred CCcEEEEEcCCCCCchhHHHHHH---hhccccccccccccccccccccCCCCCCCcccccccccccCcCCCCCCCCcccc
Q 046508 254 EADLVYIVDDDMIPGRKMLQILS---HVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVD 330 (932)
Q Consensus 254 ~~dyVwimDDD~IP~~~~Le~Ll---~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~~~~~ 330 (932)
++|||++||||+++.|++|++++ .... .. + .++..|..+.-... ..+.....+... ... . +.....
T Consensus 75 ~~d~v~~lD~D~~~~~~~l~~l~~~~~~~~--~~-~-~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~-~----~~~~~~ 143 (237)
T cd02526 75 GADYVLLFDQDSVPPPDMVEKLLAYKILSD--KN-S-NIGAVGPRIIDRRT-GENSPGVRKSGY-KLR-I----QKEGEE 143 (237)
T ss_pred CCCEEEEECCCCCcCHhHHHHHHHHHHhhc--cC-C-CeEEEeeeEEcCCC-CeeccceeccCc-cce-e----cccccC
Confidence 45999999999999999999995 2211 11 1 11222222111000 000000000000 000 0 011112
Q ss_pred ceEEeccc-cccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeeec
Q 046508 331 KIVQVDFL-SSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 331 rl~~~d~l-~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
.+...+++ +++++++|+.++.. |+|..+ ..+||..||..+++ .|..+..+|
T Consensus 144 ~~~~~~~~~~~~~~~rr~~~~~~ggfd~~~~--~~~eD~d~~~r~~~-~G~~~~~~~ 197 (237)
T cd02526 144 GLKEVDFLITSGSLISLEALEKVGGFDEDLF--IDYVDTEWCLRARS-KGYKIYVVP 197 (237)
T ss_pred CceEeeeeeccceEEcHHHHHHhCCCCHHHc--CccchHHHHHHHHH-cCCcEEEEc
Confidence 33445544 56778999999998 777643 34689999999998 888886654
No 19
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.67 E-value=1e-16 Score=150.77 Aligned_cols=100 Identities=24% Similarity=0.391 Sum_probs=86.3
Q ss_pred EEEEEcCCch-hHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcC--CCceEEEecCCCcccccchhhhhh-cC
Q 046508 179 TVILNHFKRK-TLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYN--DSRISFISSSYDFKYYGRFQMALQ-TE 254 (932)
Q Consensus 179 taVVvTYNR~-~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~--~~~i~~i~~~~N~GgaGgF~~a~~-~~ 254 (932)
|+||||||+. .|.+||++|++|+.+..+||||||+|+|++ .++++++. +.++++++.+.|.|.+++.+.+++ +.
T Consensus 1 Svvip~~n~~~~l~~~l~sl~~q~~~~~eiivvdd~s~d~~--~~~~~~~~~~~~~i~~i~~~~n~g~~~~~n~~~~~a~ 78 (169)
T PF00535_consen 1 SVVIPTYNEAEYLERTLESLLKQTDPDFEIIVVDDGSTDET--EEILEEYAESDPNIRYIRNPENLGFSAARNRGIKHAK 78 (169)
T ss_dssp EEEEEESS-TTTHHHHHHHHHHHSGCEEEEEEEECS-SSSH--HHHHHHHHCCSTTEEEEEHCCCSHHHHHHHHHHHH--
T ss_pred CEEEEeeCCHHHHHHHHHHHhhccCCCEEEEEecccccccc--ccccccccccccccccccccccccccccccccccccc
Confidence 6899999996 599999999999999999999999999985 89999983 678999999999998888877765 78
Q ss_pred CcEEEEEcCCCCCchhHHHHHHhhcc
Q 046508 255 ADLVYIVDDDMIPGRKMLQILSHVAG 280 (932)
Q Consensus 255 ~dyVwimDDD~IP~~~~Le~Ll~~~g 280 (932)
++||+++|||+++.+++|++++....
T Consensus 79 ~~~i~~ld~D~~~~~~~l~~l~~~~~ 104 (169)
T PF00535_consen 79 GEYILFLDDDDIISPDWLEELVEALE 104 (169)
T ss_dssp SSEEEEEETTEEE-TTHHHHHHHHHH
T ss_pred eeEEEEeCCCceEcHHHHHHHHHHHH
Confidence 99999999999999999999998765
No 20
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.67 E-value=6.9e-16 Score=146.63 Aligned_cols=154 Identities=21% Similarity=0.273 Sum_probs=121.1
Q ss_pred EEEEcCCchh-HHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCCcccccchhhhhh-cCCcE
Q 046508 180 VILNHFKRKT-LCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYDFKYYGRFQMALQ-TEADL 257 (932)
Q Consensus 180 aVVvTYNR~~-L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N~GgaGgF~~a~~-~~~dy 257 (932)
+||++|||.. |.++|++|++|+.+..+|+|+||+|+|++ .+++.+... +++++..+.|.|.++..+.+++ ++++|
T Consensus 1 vii~~~~~~~~l~~~l~sl~~~~~~~~~iiivdd~s~~~~--~~~~~~~~~-~~~~~~~~~~~g~~~a~n~~~~~~~~~~ 77 (166)
T cd04186 1 IIIVNYNSLEYLKACLDSLLAQTYPDFEVIVVDNASTDGS--VELLRELFP-EVRLIRNGENLGFGAGNNQGIREAKGDY 77 (166)
T ss_pred CEEEecCCHHHHHHHHHHHHhccCCCeEEEEEECCCCchH--HHHHHHhCC-CeEEEecCCCcChHHHhhHHHhhCCCCE
Confidence 5899999975 99999999999988899999999999975 777776643 7899999999998777777655 78999
Q ss_pred EEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcCCCCCCCCccccceEEecc
Q 046508 258 VYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQVDF 337 (932)
Q Consensus 258 VwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~~~~~rl~~~d~ 337 (932)
++++|||+++.+++|+.+++... +. +.+ |.+ .+ + +
T Consensus 78 i~~~D~D~~~~~~~l~~~~~~~~--~~-~~~----~~~------------------------~~---------~-----~ 112 (166)
T cd04186 78 VLLLNPDTVVEPGALLELLDAAE--QD-PDV----GIV------------------------GP---------K-----V 112 (166)
T ss_pred EEEECCCcEECccHHHHHHHHHH--hC-CCc----eEE------------------------Ec---------c-----C
Confidence 99999999999999999986421 00 000 000 00 0 7
Q ss_pred ccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeeec
Q 046508 338 LSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 338 l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
.+++++++|+.++.. |.++... .++|..|+..+.+ .|.++..+|
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~--~~eD~~~~~~~~~-~g~~i~~~~ 158 (166)
T cd04186 113 SGAFLLVRREVFEEVGGFDEDFFL--YYEDVDLCLRARL-AGYRVLYVP 158 (166)
T ss_pred ceeeEeeeHHHHHHcCCCChhhhc--cccHHHHHHHHHH-cCCeEEEcc
Confidence 788999999999987 6665332 5789999888887 788887654
No 21
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.66 E-value=3.6e-16 Score=159.02 Aligned_cols=182 Identities=20% Similarity=0.288 Sum_probs=116.4
Q ss_pred EEEEcCCch-hHHHHHHHHHcCCCC-CceEEEEeCCCCChhhHHHHHhhc----CCCceEEEe----cCCCcccc-cchh
Q 046508 180 VILNHFKRK-TLCAQLDSLLQQTLP-FQHVWVLSFGSPNELSLKRIVNSY----NDSRISFIS----SSYDFKYY-GRFQ 248 (932)
Q Consensus 180 aVVvTYNR~-~L~e~L~aLl~QT~~-~~~IiVvdnaStD~t~t~~~l~~~----~~~~i~~i~----~~~N~Gga-GgF~ 248 (932)
+|||+||+. .|++||++|++|+++ ..|||||||||+|+| .++++++ ...+++++. .+.|.|.+ +++.
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~~~~~eiiVvDd~S~d~t--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~a~N~ 78 (219)
T cd06913 1 IILPVHNGEQWLDECLESVLQQDFEGTLELSVFNDASTDKS--AEIIEKWRKKLEDSGVIVLVGSHNSPSPKGVGYAKNQ 78 (219)
T ss_pred CEEeecCcHHHHHHHHHHHHhCCCCCCEEEEEEeCCCCccH--HHHHHHHHHhCcccCeEEEEecccCCCCccHHHHHHH
Confidence 589999997 499999999999997 479999999999985 8888875 234677764 34556744 4444
Q ss_pred hhhhcCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcCCCCCCCCcc
Q 046508 249 MALQTEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDIT 328 (932)
Q Consensus 249 ~a~~~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~~~ 328 (932)
.+..+.+|||++||+|+++.|++|++++...-.. ...++|. +..... .+ ....|.++... ++
T Consensus 79 g~~~a~gd~i~~lD~D~~~~~~~l~~~~~~~~~~--~~~~v~~--~~~~~~-~~-~~~~~~~~~~~------------~~ 140 (219)
T cd06913 79 AIAQSSGRYLCFLDSDDVMMPQRIRLQYEAALQH--PNSIIGC--QVRRIP-ED-STERYTRWINT------------LT 140 (219)
T ss_pred HHHhcCCCEEEEECCCccCChhHHHHHHHHHHhC--CCcEEEE--EEEecC-cc-cchhhHHHHHh------------cC
Confidence 4445789999999999999999999987664311 1223332 221111 10 11111111110 00
Q ss_pred ccceE-------EeccccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeeec
Q 046508 329 VDKIV-------QVDFLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 329 ~~rl~-------~~d~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
...+. .-.....+||+||++++.. |.|+.. ..+||+.|...+.+ .|-+++.+|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~f~~~~~--~~~eD~~l~~r~~~-~g~~i~~~~ 202 (219)
T cd06913 141 REQLLTQVYTSHGPTVIMPTWFCSREWFSHVGPFDEGGK--GVPEDLLFFYEHLR-KGGGVYRVD 202 (219)
T ss_pred HHHHHHHHHhhcCCccccccceeehhHHhhcCCccchhc--cchhHHHHHHHHHH-cCCceEEEc
Confidence 10000 0123345689999999987 777633 33577778778877 666665543
No 22
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.66 E-value=2.6e-16 Score=160.14 Aligned_cols=191 Identities=15% Similarity=0.132 Sum_probs=124.4
Q ss_pred cEEEEEEcCCch-h-HHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhc-CCCceEEEecCCCcccccchhhhhh-
Q 046508 177 KVTVILNHFKRK-T-LCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSY-NDSRISFISSSYDFKYYGRFQMALQ- 252 (932)
Q Consensus 177 ~VtaVVvTYNR~-~-L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~-~~~~i~~i~~~~N~GgaGgF~~a~~- 252 (932)
+|++||||||+. . |.+||++|++|+ +.+||||||+|+|++ .+++... ....++++. ..|.|.++..+.+++
T Consensus 1 ~isVvIp~~ne~~~~l~~~l~sl~~q~--~~eiivvdd~s~d~~--~~~l~~~~~~~~~~v~~-~~~~g~~~a~n~g~~~ 75 (235)
T cd06434 1 DVTVIIPVYDEDPDVFRECLRSILRQK--PLEIIVVTDGDDEPY--LSILSQTVKYGGIFVIT-VPHPGKRRALAEGIRH 75 (235)
T ss_pred CeEEEEeecCCChHHHHHHHHHHHhCC--CCEEEEEeCCCChHH--HHHHHhhccCCcEEEEe-cCCCChHHHHHHHHHH
Confidence 589999999997 6 999999999999 789999999999985 6766443 445565554 567786666666655
Q ss_pred cCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCccccc-ccccccCcCCCCCCCCccccc
Q 046508 253 TEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRK-FRSKEAGLYLPDPAYDITVDK 331 (932)
Q Consensus 253 ~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~-~~s~~~g~~~p~~~y~~~~~r 331 (932)
+++|||+++|||++|.+++|++++.... .+++-+..|.+.+.......+..... +-.+.-.. ...+...
T Consensus 76 a~~d~v~~lD~D~~~~~~~l~~l~~~~~----~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 145 (235)
T cd06434 76 VTTDIVVLLDSDTVWPPNALPEMLKPFE----DPKVGGVGTNQRILRPRDSKWSFLAAEYLERRNEE------IRAAMSY 145 (235)
T ss_pred hCCCEEEEECCCceeChhHHHHHHHhcc----CCCEeEEcCceEeecCcccHHHHHHHHHHHHHHHH------HHHHHhh
Confidence 6899999999999999999999997754 23344555665554321111111100 00000000 0000000
Q ss_pred eE-EeccccccccccHHHHHHh-hccC-------CCcccchhhHHHHHHHHHhcCCCeeee
Q 046508 332 IV-QVDFLSSSWFLSAELVKTL-FIET-------PFTFMTGEDLHLSYQLQKYRNAGSFVL 383 (932)
Q Consensus 332 l~-~~d~l~~~wf~~re~l~~~-f~E~-------~~~~~t~eDlhLs~~~~ky~~i~~~vl 383 (932)
.- ...+.|++.++||++++.. +.+. ......+||..|++.+++ .|..+..+
T Consensus 146 ~~~~~~~~G~~~~~rr~~l~~~~~~~~~~~~~~~~~~~~~~eD~~l~~~~~~-~g~~~~~~ 205 (235)
T cd06434 146 DGGVPCLSGRTAAYRTEILKDFLFLEEFTNETFMGRRLNAGDDRFLTRYVLS-HGYKTVYQ 205 (235)
T ss_pred CCCEEEccCcHHHHHHHHHhhhhhHHHhhhhhhcCCCCCcCchHHHHHHHHH-CCCeEEEe
Confidence 11 1223456678999998865 2221 113467899999999998 78877544
No 23
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.66 E-value=4.9e-16 Score=158.87 Aligned_cols=189 Identities=14% Similarity=0.160 Sum_probs=123.1
Q ss_pred EEEEEcCCch--hHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhc---CCCceEEEecCCCccc-ccchhhhhh
Q 046508 179 TVILNHFKRK--TLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSY---NDSRISFISSSYDFKY-YGRFQMALQ 252 (932)
Q Consensus 179 taVVvTYNR~--~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~---~~~~i~~i~~~~N~Gg-aGgF~~a~~ 252 (932)
++|||+||.. .|++||++|++|+++..+||||||+|+|++ +.++++++ ...+++++....|.|+ +|+.+.+++
T Consensus 1 siiip~~ne~~~~l~~~l~sl~~q~~~~~eiiVvdd~s~D~t-~~~~i~~~~~~~~~~i~~i~~~~~~G~~~~a~n~g~~ 79 (236)
T cd06435 1 SIHVPCYEEPPEMVKETLDSLAALDYPNFEVIVIDNNTKDEA-LWKPVEAHCAQLGERFRFFHVEPLPGAKAGALNYALE 79 (236)
T ss_pred CeeEeeCCCcHHHHHHHHHHHHhCCCCCcEEEEEeCCCCchh-HHHHHHHHHHHhCCcEEEEEcCCCCCCchHHHHHHHH
Confidence 5899999995 499999999999999999999999999986 33444443 2357889998888896 776777655
Q ss_pred c---CCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCC-CCCCcccccccccccCcCCC-CCCCCc
Q 046508 253 T---EADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQK-DFTFPSYRKFRSKEAGLYLP-DPAYDI 327 (932)
Q Consensus 253 ~---~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~-d~~f~~y~~~~s~~~g~~~p-~~~y~~ 327 (932)
. ++|||+++|+|+++.|++|++++.... +. .-++++ |.. .+... ...+.....+.. .+.+.+ .+.++
T Consensus 80 ~a~~~~d~i~~lD~D~~~~~~~l~~l~~~~~-~~-~~~~v~--~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~- 151 (236)
T cd06435 80 RTAPDAEIIAVIDADYQVEPDWLKRLVPIFD-DP-RVGFVQ--APQ-DYRDGEESLFKRMCYAEY--KGFFDIGMVSRN- 151 (236)
T ss_pred hcCCCCCEEEEEcCCCCcCHHHHHHHHHHhc-CC-CeeEEe--cCc-cccCCCccHHHHHHhHHH--HHHHHHHhcccc-
Confidence 3 379999999999999999999987643 11 111222 211 11111 111110000000 000000 00000
Q ss_pred cccceEEeccccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeeec
Q 046508 328 TVDKIVQVDFLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 328 ~~~rl~~~d~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
... ..-..|+..++||++++.+ |+|.. ..||..||..+++ .|.+++.+|
T Consensus 152 -~~~--~~~~~g~~~~~rr~~~~~iGgf~~~~----~~eD~dl~~r~~~-~G~~~~~~~ 202 (236)
T cd06435 152 -ERN--AIIQHGTMCLIRRSALDDVGGWDEWC----ITEDSELGLRMHE-AGYIGVYVA 202 (236)
T ss_pred -ccC--ceEEecceEEEEHHHHHHhCCCCCcc----ccchHHHHHHHHH-CCcEEEEcc
Confidence 000 1123566689999999998 77754 2789999999998 888886654
No 24
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.66 E-value=1.7e-15 Score=154.17 Aligned_cols=187 Identities=20% Similarity=0.255 Sum_probs=122.7
Q ss_pred cEEEEEEcCCchh-HHHHHHHHHcCCCC--CceEEEEeCCCCChhhHHHHHhhc--CCCceEEEecCCCcccccchhhhh
Q 046508 177 KVTVILNHFKRKT-LCAQLDSLLQQTLP--FQHVWVLSFGSPNELSLKRIVNSY--NDSRISFISSSYDFKYYGRFQMAL 251 (932)
Q Consensus 177 ~VtaVVvTYNR~~-L~e~L~aLl~QT~~--~~~IiVvdnaStD~t~t~~~l~~~--~~~~i~~i~~~~N~GgaGgF~~a~ 251 (932)
+|++||||||+.. |.++|++|++|+++ ..+|||+||+|+|++ .++++++ ++..++++..+ |.|.+++.+.++
T Consensus 1 ~~sIiip~~n~~~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~--~~~~~~~~~~~~~v~~i~~~-~~~~~~a~N~g~ 77 (249)
T cd02525 1 FVSIIIPVRNEEKYIEELLESLLNQSYPKDLIEIIVVDGGSTDGT--REIVQEYAAKDPRIRLIDNP-KRIQSAGLNIGI 77 (249)
T ss_pred CEEEEEEcCCchhhHHHHHHHHHhccCCCCccEEEEEeCCCCccH--HHHHHHHHhcCCeEEEEeCC-CCCchHHHHHHH
Confidence 4899999999974 99999999999984 679999999999985 8898887 34678888765 456566666665
Q ss_pred h-cCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCC---Ccc--cccccccccCcCCCCCCC
Q 046508 252 Q-TEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFT---FPS--YRKFRSKEAGLYLPDPAY 325 (932)
Q Consensus 252 ~-~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~---f~~--y~~~~s~~~g~~~p~~~y 325 (932)
+ +.+|||+|||||+++.|++|++++.... + ++..+..|...... .+.. +.. ...+... .. .+
T Consensus 78 ~~a~~d~v~~lD~D~~~~~~~l~~~~~~~~-~---~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~-----~~ 145 (249)
T cd02525 78 RNSRGDIIIRVDAHAVYPKDYILELVEALK-R---TGADNVGGPMETIG-ESKFQKAIAVAQSSPLGSG--GS-----AY 145 (249)
T ss_pred HHhCCCEEEEECCCccCCHHHHHHHHHHHh-c---CCCCEEecceecCC-CChHHHHHHHHhhchhccC--Cc-----cc
Confidence 5 7899999999999999999999996532 1 12222233321110 1000 000 0000000 00 01
Q ss_pred CccccceEEeccccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeee
Q 046508 326 DITVDKIVQVDFLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVL 383 (932)
Q Consensus 326 ~~~~~rl~~~d~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vl 383 (932)
........ ....+++.+++|++++.+ |.|. + ..+||+.|+..+.+ +|..+..+
T Consensus 146 ~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~-~--~~~eD~~l~~r~~~-~G~~~~~~ 200 (249)
T cd02525 146 RGGAVKIG-YVDTVHHGAYRREVFEKVGGFDES-L--VRNEDAELNYRLRK-AGYKIWLS 200 (249)
T ss_pred cccccccc-cccccccceEEHHHHHHhCCCCcc-c--CccchhHHHHHHHH-cCcEEEEc
Confidence 11111101 134566778899999887 6664 2 23689999989988 77777543
No 25
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.65 E-value=1.1e-15 Score=158.53 Aligned_cols=192 Identities=15% Similarity=0.141 Sum_probs=124.3
Q ss_pred CcEEEEEEcCCchh-HHHHHHHHHcCCCCC--ceEEEEeCCCCChhhHHHHHhhcCC---CceEEEecCCCcccccchhh
Q 046508 176 PKVTVILNHFKRKT-LCAQLDSLLQQTLPF--QHVWVLSFGSPNELSLKRIVNSYND---SRISFISSSYDFKYYGRFQM 249 (932)
Q Consensus 176 ~~VtaVVvTYNR~~-L~e~L~aLl~QT~~~--~~IiVvdnaStD~t~t~~~l~~~~~---~~i~~i~~~~N~GgaGgF~~ 249 (932)
|+|++|||+||... |.++|++|++|+++. .|||||||+|+|+| .++++++.. .+|+++..+.|.|.++..+.
T Consensus 1 p~vsIiIp~~Ne~~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t--~~i~~~~~~~~~~~i~~~~~~~~~G~~~a~n~ 78 (241)
T cd06427 1 PVYTILVPLYKEAEVLPQLIASLSALDYPRSKLDVKLLLEEDDEET--IAAARALRLPSIFRVVVVPPSQPRTKPKACNY 78 (241)
T ss_pred CeEEEEEecCCcHHHHHHHHHHHHhCcCCcccEEEEEEECCCCchH--HHHHHHhccCCCeeEEEecCCCCCchHHHHHH
Confidence 57999999999964 999999999999975 58999999999975 889988732 35666666677875554444
Q ss_pred h-hhcCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcc--cc-cccccccCcCCCCCCC
Q 046508 250 A-LQTEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPS--YR-KFRSKEAGLYLPDPAY 325 (932)
Q Consensus 250 a-~~~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~--y~-~~~s~~~g~~~p~~~y 325 (932)
+ .++.+|||++||+|+++.|++|++++.... +....+.+..|++ .+.....++.. +. .+.... +-.+|
T Consensus 79 g~~~a~gd~i~~~DaD~~~~~~~l~~~~~~~~--~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~---- 150 (241)
T cd06427 79 ALAFARGEYVVIYDAEDAPDPDQLKKAVAAFA--RLDDKLACVQAPL-NYYNARENWLTRMFALEYAAWF-DYLLP---- 150 (241)
T ss_pred HHHhcCCCEEEEEcCCCCCChHHHHHHHHHHH--hcCCCEEEEeCce-EeeCCCccHHHHHHHHHHHHHH-HHHHH----
Confidence 4 447899999999999999999999997643 1112233333443 12111111100 00 000000 00001
Q ss_pred CccccceEEec-cccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeeec
Q 046508 326 DITVDKIVQVD-FLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 326 ~~~~~rl~~~d-~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
...++-... +.|+++++||++++.+ |+|. ...||+.|+..+.+ .|..+.-+|
T Consensus 151 --~~~~~~~~~~~~g~~~~~rr~~~~~vgg~~~~----~~~eD~~l~~rl~~-~G~r~~~~~ 205 (241)
T cd06427 151 --GLARLGLPIPLGGTSNHFRTDVLRELGGWDPF----NVTEDADLGLRLAR-AGYRTGVLN 205 (241)
T ss_pred --HHHhcCCeeecCCchHHhhHHHHHHcCCCCcc----cchhhHHHHHHHHH-CCceEEEec
Confidence 000111112 3456689999999998 5553 23689999999987 787776554
No 26
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.65 E-value=4.6e-16 Score=158.01 Aligned_cols=191 Identities=22% Similarity=0.285 Sum_probs=107.8
Q ss_pred CcEEEEEEcCCchh-HHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhh----cCCCceEEEecCCCcc---cccch
Q 046508 176 PKVTVILNHFKRKT-LCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNS----YNDSRISFISSSYDFK---YYGRF 247 (932)
Q Consensus 176 ~~VtaVVvTYNR~~-L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~----~~~~~i~~i~~~~N~G---gaGgF 247 (932)
|+|++|||+||+.. |.+||++|++|+++..+|+|+||+|++++ .+++++ +...+++++..+.|.| .++..
T Consensus 1 P~v~Vvip~~~~~~~l~~~l~sl~~~~~~~~~v~vvd~~~~~~~--~~~~~~~~~~~~~~~v~vi~~~~~~g~~~k~~a~ 78 (228)
T PF13641_consen 1 PRVSVVIPAYNEDDVLRRCLESLLAQDYPRLEVVVVDDGSDDET--AEILRALAARYPRVRVRVIRRPRNPGPGGKARAL 78 (228)
T ss_dssp --EEEE--BSS-HHHHHHHHHHHTTSHHHTEEEEEEEE-SSS-G--CTTHHHHHHTTGG-GEEEEE----HHHHHHHHHH
T ss_pred CEEEEEEEecCCHHHHHHHHHHHHcCCCCCeEEEEEECCCChHH--HHHHHHHHHHcCCCceEEeecCCCCCcchHHHHH
Confidence 57999999999975 99999999999998899999999999985 555544 4444689999888776 22333
Q ss_pred hhhhh-cCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcCCCCCCCC
Q 046508 248 QMALQ-TEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYD 326 (932)
Q Consensus 248 ~~a~~-~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~ 326 (932)
+.+++ +.+|||+++|||+++.|++|++++.... + +++-+..|...+.+ .+..+..+... ..+..+.......
T Consensus 79 n~~~~~~~~d~i~~lD~D~~~~p~~l~~~~~~~~-~---~~~~~v~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~ 151 (228)
T PF13641_consen 79 NEALAAARGDYILFLDDDTVLDPDWLERLLAAFA-D---PGVGAVGGPVFPDN-DRNWLTRLQDL--FFARWHLRFRSGR 151 (228)
T ss_dssp HHHHHH---SEEEEE-SSEEE-CHHHHHHHHHHH-B---SS--EEEEEEEETT-CCCEEEE-TT----S-EETTTS-TT-
T ss_pred HHHHHhcCCCEEEEECCCcEECHHHHHHHHHHHH-h---CCCCeEeeeEeecC-CCCHHHHHHHH--HHhhhhhhhhhhh
Confidence 44444 6799999999999999999999998762 2 22222234443332 11111111000 0000101100011
Q ss_pred ccccceEEec-cccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeeec
Q 046508 327 ITVDKIVQVD-FLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 327 ~~~~rl~~~d-~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
+-..+. +.|+++++||+.++.. |++ ...+||+.|+..+++ +|.++..+|
T Consensus 152 ----~~~~~~~~~G~~~~~rr~~~~~~g~fd~----~~~~eD~~l~~r~~~-~G~~~~~~~ 203 (228)
T PF13641_consen 152 ----RALGVAFLSGSGMLFRRSALEEVGGFDP----FILGEDFDLCLRLRA-AGWRIVYAP 203 (228)
T ss_dssp ----B----S-B--TEEEEEHHHHHHH-S--S----SSSSHHHHHHHHHHH-TT--EEEEE
T ss_pred ----cccceeeccCcEEEEEHHHHHHhCCCCC----CCcccHHHHHHHHHH-CCCcEEEEC
Confidence 112233 3578999999999999 666 444699999999999 999996543
No 27
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.64 E-value=1.3e-15 Score=167.57 Aligned_cols=103 Identities=19% Similarity=0.266 Sum_probs=89.6
Q ss_pred CCCcEEEEEEcCCch-hHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhc--CCCceEEEecCCCcccccchhhh
Q 046508 174 NRPKVTVILNHFKRK-TLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSY--NDSRISFISSSYDFKYYGRFQMA 250 (932)
Q Consensus 174 ~~~~VtaVVvTYNR~-~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~--~~~~i~~i~~~~N~GgaGgF~~a 250 (932)
+.|.|++|||+||+. .|++||++|++||++..|||||||||||+| .++++++ .+++|++++. .|.|.++..+.+
T Consensus 4 ~~p~vSVIIP~yN~~~~L~~~l~Sl~~Qt~~~~EIIiVdDgStD~t--~~i~~~~~~~~~~i~vi~~-~n~G~~~arN~g 80 (328)
T PRK10073 4 STPKLSIIIPLYNAGKDFRAFMESLIAQTWTALEIIIVNDGSTDNS--VEIAKHYAENYPHVRLLHQ-ANAGVSVARNTG 80 (328)
T ss_pred CCCeEEEEEeccCCHHHHHHHHHHHHhCCCCCeEEEEEeCCCCccH--HHHHHHHHhhCCCEEEEEC-CCCChHHHHHHH
Confidence 457899999999997 599999999999999999999999999985 8999987 4578999985 599965555555
Q ss_pred hh-cCCcEEEEEcCCCCCchhHHHHHHhhc
Q 046508 251 LQ-TEADLVYIVDDDMIPGRKMLQILSHVA 279 (932)
Q Consensus 251 ~~-~~~dyVwimDDD~IP~~~~Le~Ll~~~ 279 (932)
++ +.+|||+++|+|++..|++|+++++..
T Consensus 81 l~~a~g~yi~flD~DD~~~p~~l~~l~~~~ 110 (328)
T PRK10073 81 LAVATGKYVAFPDADDVVYPTMYETLMTMA 110 (328)
T ss_pred HHhCCCCEEEEECCCCccChhHHHHHHHHH
Confidence 54 889999999999999999999998764
No 28
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.63 E-value=1.7e-15 Score=141.99 Aligned_cols=170 Identities=15% Similarity=0.157 Sum_probs=111.6
Q ss_pred EEEEcCCch-hHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCC---CceEEEecCCCcccccchhhhhh-cC
Q 046508 180 VILNHFKRK-TLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYND---SRISFISSSYDFKYYGRFQMALQ-TE 254 (932)
Q Consensus 180 aVVvTYNR~-~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~---~~i~~i~~~~N~GgaGgF~~a~~-~~ 254 (932)
+||||||+. .|.+||++|++|+++..+|+||||+|+|++ .+++.++.. ..+.++....|.|.++..+.+++ ++
T Consensus 1 Viip~~n~~~~l~~~l~sl~~q~~~~~~iivvdd~s~d~t--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~n~~~~~~~ 78 (180)
T cd06423 1 IIVPAYNEEAVIERTIESLLALDYPKLEVIVVDDGSTDDT--LEILEELAALYIRRVLVVRDKENGGKAGALNAGLRHAK 78 (180)
T ss_pred CeecccChHHHHHHHHHHHHhCCCCceEEEEEeCCCccch--HHHHHHHhccccceEEEEEecccCCchHHHHHHHHhcC
Confidence 589999997 599999999999999999999999999975 778877632 45788889999996666666555 68
Q ss_pred CcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcCCCCCCCCccccceEE
Q 046508 255 ADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQ 334 (932)
Q Consensus 255 ~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~~~~~rl~~ 334 (932)
+|||++||||+++.+++|++++...- . .+.+.+..|...........+..+....- .......... .......
T Consensus 79 ~~~i~~~D~D~~~~~~~l~~~~~~~~--~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~ 151 (180)
T cd06423 79 GDIVVVLDADTILEPDALKRLVVPFF--A-DPKVGAVQGRVRVRNGSENLLTRLQAIEY--LSIFRLGRRA--QSALGGV 151 (180)
T ss_pred CCEEEEECCCCCcChHHHHHHHHHhc--c-CCCeeeEeeeEEEecCcCcceeccchhee--cceeeeeeeh--hheecce
Confidence 99999999999999999999954432 1 12233434444222111111111100000 0000000000 0001123
Q ss_pred eccccccccccHHHHHHh--hccCCC
Q 046508 335 VDFLSSSWFLSAELVKTL--FIETPF 358 (932)
Q Consensus 335 ~d~l~~~wf~~re~l~~~--f~E~~~ 358 (932)
..+.+++++++|+.++.+ |.|..+
T Consensus 152 ~~~~g~~~~~~~~~~~~~ggf~~~~~ 177 (180)
T cd06423 152 LVLSGAFGAFRREALREVGGWDEDTL 177 (180)
T ss_pred eecCchHHHHHHHHHHHhCCccccCc
Confidence 567889999999999987 777654
No 29
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.63 E-value=6.6e-16 Score=156.22 Aligned_cols=191 Identities=13% Similarity=0.114 Sum_probs=130.5
Q ss_pred EEEEcCCchh-HHHHHHHHHcCCC----CCceEEEEeCCCCChhhHHHHHhhc--CCC-ceEEEecCCCcccccchhhhh
Q 046508 180 VILNHFKRKT-LCAQLDSLLQQTL----PFQHVWVLSFGSPNELSLKRIVNSY--NDS-RISFISSSYDFKYYGRFQMAL 251 (932)
Q Consensus 180 aVVvTYNR~~-L~e~L~aLl~QT~----~~~~IiVvdnaStD~t~t~~~l~~~--~~~-~i~~i~~~~N~GgaGgF~~a~ 251 (932)
+|||+||... |.+||++|++|+. +..|||||||||+|+| .++++++ ..+ .|+++....|.|.++.++.++
T Consensus 1 iiip~yN~~~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D~t--~~~~~~~~~~~~~~i~~i~~~~n~G~~~a~~~g~ 78 (211)
T cd04188 1 VVIPAYNEEKRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKDGT--AEVARKLARKNPALIRVLTLPKNRGKGGAVRAGM 78 (211)
T ss_pred CEEcccChHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCCch--HHHHHHHHHhCCCcEEEEEcccCCCcHHHHHHHH
Confidence 5899999974 9999999999965 5789999999999985 8899886 222 368999999999888887776
Q ss_pred h-cCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCC-CCCcccccccccccCcCCCCCCCCccc
Q 046508 252 Q-TEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKD-FTFPSYRKFRSKEAGLYLPDPAYDITV 329 (932)
Q Consensus 252 ~-~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d-~~f~~y~~~~s~~~g~~~p~~~y~~~~ 329 (932)
+ +.+|||++||+|+.+.+++|++++.... +.....++|+ +..+. ... .....++.+.++.... +- . ..
T Consensus 79 ~~a~gd~i~~ld~D~~~~~~~l~~l~~~~~-~~~~~~v~g~--r~~~~-~~~~~~~~~~~~~~~~~~~~-~~----~-~~ 148 (211)
T cd04188 79 LAARGDYILFADADLATPFEELEKLEEALK-TSGYDIAIGS--RAHLA-SAAVVKRSWLRNLLGRGFNF-LV----R-LL 148 (211)
T ss_pred HHhcCCEEEEEeCCCCCCHHHHHHHHHHHh-ccCCcEEEEE--eeccC-CcccccccHHHHHHHHHHHH-HH----H-HH
Confidence 5 7899999999999999999999997622 1111223332 21211 110 0011122222211000 00 0 01
Q ss_pred cceEEeccccccccccHHHHHHhhc-cCCCcccchhhHHHHHHHHHhcCCCeeeecc
Q 046508 330 DKIVQVDFLSSSWFLSAELVKTLFI-ETPFTFMTGEDLHLSYQLQKYRNAGSFVLPV 385 (932)
Q Consensus 330 ~rl~~~d~l~~~wf~~re~l~~~f~-E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp~ 385 (932)
......|..|+..+++|+.++.++. ++...| ++|+.|+..+.+ +|.++..+|+
T Consensus 149 ~~~~~~d~~~g~~~~~r~~~~~~~~~~~~~~~--~~d~el~~r~~~-~g~~~~~vpi 202 (211)
T cd04188 149 LGLGIKDTQCGFKLFTRDAARRLFPRLHLERW--AFDVELLVLARR-LGYPIEEVPV 202 (211)
T ss_pred cCCCCcccccCceeEcHHHHHHHHhhhhccce--EeeHHHHHHHHH-cCCeEEEcCc
Confidence 1223457788999999999998863 233333 358889889999 9999988886
No 30
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.63 E-value=2.8e-15 Score=150.96 Aligned_cols=173 Identities=17% Similarity=0.181 Sum_probs=114.7
Q ss_pred EEEEEEcCCchh-HHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCCcccccchhhhh-hcCC
Q 046508 178 VTVILNHFKRKT-LCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYDFKYYGRFQMAL-QTEA 255 (932)
Q Consensus 178 VtaVVvTYNR~~-L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N~GgaGgF~~a~-~~~~ 255 (932)
|++|||+||+.. |.+||++|++|+++..+||||||+|+|++ .+++++ ..++++.. |.|.++..+.++ .+.+
T Consensus 1 vsvii~~~n~~~~l~~~l~sl~~q~~~~~evivvdd~s~d~~--~~~~~~---~~~~~~~~--~~g~~~a~n~g~~~a~~ 73 (221)
T cd02522 1 LSIIIPTLNEAENLPRLLASLRRLNPLPLEIIVVDGGSTDGT--VAIARS---AGVVVISS--PKGRARQMNAGAAAARG 73 (221)
T ss_pred CEEEEEccCcHHHHHHHHHHHHhccCCCcEEEEEeCCCCccH--HHHHhc---CCeEEEeC--CcCHHHHHHHHHHhccC
Confidence 689999999975 99999999999998899999999999985 778776 34566654 455444455544 4779
Q ss_pred cEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcCCCCCCCCccccceEEe
Q 046508 256 DLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQV 335 (932)
Q Consensus 256 dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~~~~~rl~~~ 335 (932)
|||++||+|+++.+++|++|+.... .....+..+......+. ....+ ... +...+ ......
T Consensus 74 ~~i~~~D~D~~~~~~~l~~l~~~~~----~~~~~~~~~~~~~~~~~--~~~~~--~~~---~~~~~--------~~~~~~ 134 (221)
T cd02522 74 DWLLFLHADTRLPPDWDAAIIETLR----ADGAVAGAFRLRFDDPG--PRLRL--LEL---GANLR--------SRLFGL 134 (221)
T ss_pred CEEEEEcCCCCCChhHHHHHHHHhh----cCCcEEEEEEeeecCCc--cchhh--hhh---cccce--------ecccCC
Confidence 9999999999999999999865432 11122212222111111 11110 000 00001 011122
Q ss_pred ccccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCee
Q 046508 336 DFLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSF 381 (932)
Q Consensus 336 d~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~ 381 (932)
.+..++.+++|+.++.. |+|.. -.||+.|+..+++ .|..++
T Consensus 135 ~~~~~~~~~r~~~~~~~G~fd~~~----~~ED~d~~~r~~~-~G~~~~ 177 (221)
T cd02522 135 PYGDQGLFIRRELFEELGGFPELP----LMEDVELVRRLRR-RGRPAL 177 (221)
T ss_pred CcCCceEEEEHHHHHHhCCCCccc----cccHHHHHHHHHh-CCCEEE
Confidence 23345789999998888 77766 4689999999998 776665
No 31
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=99.62 E-value=3e-15 Score=165.79 Aligned_cols=195 Identities=23% Similarity=0.361 Sum_probs=131.4
Q ss_pred eeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEE----ecccc--------
Q 046508 599 ISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRR----RIIQG-------- 666 (932)
Q Consensus 599 i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~----Ri~n~-------- 666 (932)
+||+|++||||++|+|+|+||.++.+.....+|+|+.|+..+ ++.+.++.+. .++++.+ +..+.
T Consensus 2 ~PVlv~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~-~~~~~v~~~~---~~i~~i~~~~~~~~~~~~~~~~~~ 77 (334)
T cd02514 2 IPVLVIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYE-EVADVAKSFG---DGVTHIQHPPISIKNVNPPHKFQG 77 (334)
T ss_pred cCEEEEecCCHHHHHHHHHHHHhccccCCCceEEEEeCCCch-HHHHHHHhhc---cccEEEEcccccccccCcccccch
Confidence 699999999999999999999998754455689999998643 3666776662 1222211 11221
Q ss_pred --chhh----hhhhhcccCCCCceEEEEcCCcccChHHHHHHHHHHHHhcCCCCCCCCCeeeEEeeCCcchhhcccCCCC
Q 046508 667 --GLIR----AVSESWYPASDDDFGLLLEDDIEVSPYFYLWIKYALLAYHYDPQISLPELSSISLYTPRIVEVVKERPKW 740 (932)
Q Consensus 667 --GLir----~VlEsf~P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl~Y~ys~~v~~~~L~GISLy~p~~~e~~~~rp~~ 740 (932)
++.+ ++-..|- ...+++|||||||+++||.||.|++.+|..|+.++++ +.||+++..-.
T Consensus 78 y~~ia~hyk~aln~vF~-~~~~~~vIILEDDl~~sPdFf~yf~~~l~~y~~D~~v-----~~ISa~NdnG~--------- 142 (334)
T cd02514 78 YYRIARHYKWALTQTFN-LFGYSFVIILEDDLDIAPDFFSYFQATLPLLEEDPSL-----WCISAWNDNGK--------- 142 (334)
T ss_pred hhHHHHHHHHHHHHHHH-hcCCCEEEEECCCCccCHhHHHHHHHHHHHHhcCCCE-----EEEEeeccCCc---------
Confidence 2233 3333332 1247899999999999999999999999999999887 99999975211
Q ss_pred cccccccCCCCCCCeeeccCCCccccccchhhHhHHhHhhhcccccccCCCCccCCcccccchhhHHHHHHHHHHHhCcE
Q 046508 741 NATEFFKHIHPNTPYLHQLPCSWGAVFFPKQWREFYVYMHMRFTEDAKANPVQIPKSRTNGWQASWKKFLIDMMYLRGYV 820 (932)
Q Consensus 741 ~~t~~~~~~~~~~~FL~Q~P~SWG~l~f~d~W~eFh~yls~rl~~~~~~~p~~ip~~~sn~W~~SW~kyllel~~lRGY~ 820 (932)
.......+...|.....+.|||++|.+.|.++ + | ..|. . -|=.++-.-..-+|=-
T Consensus 143 ---~~~~~~~~~~lyrs~ff~glGWml~r~~W~e~----~----------~-~wp~---~----~WD~w~R~~~~rkgr~ 197 (334)
T cd02514 143 ---EHFVDDTPSLLYRTDFFPGLGWMLTRKLWKEL----E----------P-KWPK---A----FWDDWMRLPEQRKGRE 197 (334)
T ss_pred ---ccccCCCcceEEEecCCCchHHHHHHHHHHHh----C----------C-CCCC---C----ChHHhhcchhhhcCCc
Confidence 00000013456777888999999999999997 1 1 1222 1 2444444445568889
Q ss_pred EeccCCCCCCcceeeccCCCC
Q 046508 821 SLYPNFPNQASFSTNHMEPGA 841 (932)
Q Consensus 821 ~LYPnf~~~~SlsTnH~E~G~ 841 (932)
++.|- .|-+-++.+-|.
T Consensus 198 cirPe----isRt~~~g~~g~ 214 (334)
T cd02514 198 CIRPE----ISRTYHFGKKGV 214 (334)
T ss_pred cccCC----cchheecccccc
Confidence 99995 444344444443
No 32
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=99.62 E-value=1.5e-15 Score=173.08 Aligned_cols=196 Identities=13% Similarity=0.198 Sum_probs=126.6
Q ss_pred CCCcEEEEEEcCCchh-HHHHHHHHHcCCCCCc--eEEEEeCCCCChhhHHHHHhhc--CCCceEEEecCCCcccccchh
Q 046508 174 NRPKVTVILNHFKRKT-LCAQLDSLLQQTLPFQ--HVWVLSFGSPNELSLKRIVNSY--NDSRISFISSSYDFKYYGRFQ 248 (932)
Q Consensus 174 ~~~~VtaVVvTYNR~~-L~e~L~aLl~QT~~~~--~IiVvdnaStD~t~t~~~l~~~--~~~~i~~i~~~~N~GgaGgF~ 248 (932)
..|+|++|||+||... |.+||++|++|++|.+ |||||||||+|+| .+++++. ..++++++..+.|.|.++..+
T Consensus 47 ~~P~vsVIIP~yNe~~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T--~~il~~~~~~~~~v~v~~~~~~~Gka~AlN 124 (439)
T TIGR03111 47 KLPDITIIIPVYNSEDTLFNCIESIYNQTYPIELIDIILANNQSTDDS--FQVFCRAQNEFPGLSLRYMNSDQGKAKALN 124 (439)
T ss_pred CCCCEEEEEEeCCChHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhH--HHHHHHHHHhCCCeEEEEeCCCCCHHHHHH
Confidence 4678999999999975 9999999999999864 7999999999985 8888765 335677777778888777767
Q ss_pred hhhh-cCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCC-CCCCcccccccccc-----cCcCCC
Q 046508 249 MALQ-TEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQK-DFTFPSYRKFRSKE-----AGLYLP 321 (932)
Q Consensus 249 ~a~~-~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~-d~~f~~y~~~~s~~-----~g~~~p 321 (932)
.|++ +++|||.+||+|++|+|++|++++.....+ +.+.+..|.+.+-... +..-..+.++-.+. +...+.
T Consensus 125 ~gl~~s~g~~v~~~DaD~~~~~d~L~~l~~~f~~~---~~v~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~ 201 (439)
T TIGR03111 125 AAIYNSIGKYIIHIDSDGKLHKDAIKNMVTRFENN---PDIHAMTGVILTDKELIEKTKGRFLKLIRRCEYFEYAQAFLA 201 (439)
T ss_pred HHHHHccCCEEEEECCCCCcChHHHHHHHHHHHhC---CCeEEEEeEEecCchhhhhhcchhhhHhHHhHHHHHHHHHHh
Confidence 7655 789999999999999999999998765312 1233445665442110 00000000000000 000000
Q ss_pred CCCCCccccceEE-eccccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCee
Q 046508 322 DPAYDITVDKIVQ-VDFLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSF 381 (932)
Q Consensus 322 ~~~y~~~~~rl~~-~d~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~ 381 (932)
+... ..+.-. ...-|+...+||+.++.. |+++-+ +||++|+..+++..|-.++
T Consensus 202 --~r~~-~s~~~~~~~~sGa~~~~Rr~~l~~vggf~~~~i----~ED~~l~~rl~~~~g~kv~ 257 (439)
T TIGR03111 202 --GRNF-ESQVNSLFTLSGAFSAFRRETILKTQLYNSETV----GEDTDMTFQIRELLDGKVY 257 (439)
T ss_pred --hhHH-HHhcCCeEEEccHHHhhhHHHHHHhCCCCCCCc----CccHHHHHHHHHhcCCeEE
Confidence 0000 000011 123355567999999876 665543 7999999999775555543
No 33
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.62 E-value=3e-15 Score=155.85 Aligned_cols=197 Identities=15% Similarity=0.175 Sum_probs=131.0
Q ss_pred CCCcEEEEEEcCCchh-HHHHHHHHHcC--CCCCceEEEEeCCCCChhhHHHHHhhc----CCCceEEEecCCCcccccc
Q 046508 174 NRPKVTVILNHFKRKT-LCAQLDSLLQQ--TLPFQHVWVLSFGSPNELSLKRIVNSY----NDSRISFISSSYDFKYYGR 246 (932)
Q Consensus 174 ~~~~VtaVVvTYNR~~-L~e~L~aLl~Q--T~~~~~IiVvdnaStD~t~t~~~l~~~----~~~~i~~i~~~~N~GgaGg 246 (932)
..++|++|||+||... |.++|+.|.+| +.+..|||||||||+|+| .++++++ .+.+++++....|.|.++.
T Consensus 7 ~~~~vsVvIp~yne~~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D~t--~~i~~~~~~~~~~~~v~~~~~~~n~G~~~a 84 (243)
T PLN02726 7 GAMKYSIIVPTYNERLNIALIVYLIFKALQDVKDFEIIVVDDGSPDGT--QDVVKQLQKVYGEDRILLRPRPGKLGLGTA 84 (243)
T ss_pred CCceEEEEEccCCchhhHHHHHHHHHHHhccCCCeEEEEEeCCCCCCH--HHHHHHHHHhcCCCcEEEEecCCCCCHHHH
Confidence 5678999999999975 99999888664 445789999999999985 8898875 3457889999999997777
Q ss_pred hhhhhh-cCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCC---cccccccccccCcCCCC
Q 046508 247 FQMALQ-TEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTF---PSYRKFRSKEAGLYLPD 322 (932)
Q Consensus 247 F~~a~~-~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f---~~y~~~~s~~~g~~~p~ 322 (932)
++.++. +.+|||++||+|+.+.|++|+++++..... ...-+.| .. + ..++.. ..+|++.++-... +-
T Consensus 85 ~n~g~~~a~g~~i~~lD~D~~~~~~~l~~l~~~~~~~-~~~~v~g---~r--~-~~~~~~~~~~~~r~~~~~~~~~-~~- 155 (243)
T PLN02726 85 YIHGLKHASGDFVVIMDADLSHHPKYLPSFIKKQRET-GADIVTG---TR--Y-VKGGGVHGWDLRRKLTSRGANV-LA- 155 (243)
T ss_pred HHHHHHHcCCCEEEEEcCCCCCCHHHHHHHHHHHHhc-CCcEEEE---cc--c-cCCCCcCCccHHHHHHHHHHHH-HH-
Confidence 766654 789999999999999999999999764311 1121333 21 1 011111 1122222211000 00
Q ss_pred CCCCccccceEEeccccccccccHHHHHHhh--ccCCCcccchhhHHHHHHHHHhcCCCeeeeccCCCC
Q 046508 323 PAYDITVDKIVQVDFLSSSWFLSAELVKTLF--IETPFTFMTGEDLHLSYQLQKYRNAGSFVLPVDPND 389 (932)
Q Consensus 323 ~~y~~~~~rl~~~d~l~~~wf~~re~l~~~f--~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp~~p~~ 389 (932)
+. ....--.|..|+..+++|++++.+. .+. ..| .+|+.|+..+.+ +|.++..+|+.-..
T Consensus 156 ---~~-~~~~~~~d~~g~~~~~rr~~~~~i~~~~~~-~~~--~~~~el~~~~~~-~g~~i~~vp~~~~~ 216 (243)
T PLN02726 156 ---QT-LLWPGVSDLTGSFRLYKRSALEDLVSSVVS-KGY--VFQMEIIVRASR-KGYRIEEVPITFVD 216 (243)
T ss_pred ---HH-HhCCCCCcCCCcccceeHHHHHHHHhhccC-CCc--EEehHHHHHHHH-cCCcEEEeCcEEeC
Confidence 00 0000123677888899999999884 232 122 236778778888 89999888875443
No 34
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=99.59 E-value=9.5e-15 Score=166.50 Aligned_cols=192 Identities=16% Similarity=0.218 Sum_probs=131.7
Q ss_pred CCCcEEEEEEcCCchh-HHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhc--CCCceEEEecCCCcccccchhhh
Q 046508 174 NRPKVTVILNHFKRKT-LCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSY--NDSRISFISSSYDFKYYGRFQMA 250 (932)
Q Consensus 174 ~~~~VtaVVvTYNR~~-L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~--~~~~i~~i~~~~N~GgaGgF~~a 250 (932)
..|+|++|||+||... +.+||+++++|++|..||+||||||+|+| .++++++ ..++++++..+.|.|-+++.+.+
T Consensus 73 ~~p~vsViIP~yNE~~~i~~~l~sll~q~yp~~eIivVdDgs~D~t--~~~~~~~~~~~~~v~vv~~~~n~Gka~AlN~g 150 (444)
T PRK14583 73 GHPLVSILVPCFNEGLNARETIHAALAQTYTNIEVIAINDGSSDDT--AQVLDALLAEDPRLRVIHLAHNQGKAIALRMG 150 (444)
T ss_pred CCCcEEEEEEeCCCHHHHHHHHHHHHcCCCCCeEEEEEECCCCccH--HHHHHHHHHhCCCEEEEEeCCCCCHHHHHHHH
Confidence 4578999999999975 99999999999999999999999999985 8888775 44679999999999977777776
Q ss_pred hh-cCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCC-cccc--cccccccCcCCCC-CCC
Q 046508 251 LQ-TEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTF-PSYR--KFRSKEAGLYLPD-PAY 325 (932)
Q Consensus 251 ~~-~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f-~~y~--~~~s~~~g~~~p~-~~y 325 (932)
++ +++||+.++|+|++++|++|++++...-.+ +.+-+..|...+.. + .++ .... .+.+.. |...+. ..|
T Consensus 151 l~~a~~d~iv~lDAD~~~~~d~L~~lv~~~~~~---~~~g~v~g~~~~~~-~-~~~~~~~~~~e~~~~~-~~~~~~~~~~ 224 (444)
T PRK14583 151 AAAARSEYLVCIDGDALLDKNAVPYLVAPLIAN---PRTGAVTGNPRIRT-R-STLIGRVQVGEFSSII-GLIKRTQRVY 224 (444)
T ss_pred HHhCCCCEEEEECCCCCcCHHHHHHHHHHHHhC---CCeEEEEccceecC-C-CcchhhHHHHHHHHHH-HHHHHHHHHh
Confidence 55 789999999999999999999998653211 12323334432221 1 111 1000 000000 000000 001
Q ss_pred CccccceEEeccccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeeec
Q 046508 326 DITVDKIVQVDFLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 326 ~~~~~rl~~~d~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
+ .+ .-+.|++..+||+.++.. |++.-+ .||+.|+..+++ +|..+...|
T Consensus 225 g----~~--~~~sG~~~~~rr~al~~vGg~~~~~i----~ED~dl~~rl~~-~G~~i~~~p 274 (444)
T PRK14583 225 G----QV--FTVSGVVAAFRRRALADVGYWSPDMI----TEDIDISWKLQL-KHWSVFFEP 274 (444)
T ss_pred C----Cc--eEecCceeEEEHHHHHHcCCCCCCcc----cccHHHHHHHHH-cCCeEEEee
Confidence 1 01 123467789999999988 776644 599999999998 777765433
No 35
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.59 E-value=9.2e-15 Score=163.71 Aligned_cols=193 Identities=16% Similarity=0.120 Sum_probs=122.2
Q ss_pred CCCcEEEEEEcCCchh-HHHHHHHHHcCCCC-CceEEEEeCCCCChhhHHHHHhhcC--C---CceEEEecCC-Cccccc
Q 046508 174 NRPKVTVILNHFKRKT-LCAQLDSLLQQTLP-FQHVWVLSFGSPNELSLKRIVNSYN--D---SRISFISSSY-DFKYYG 245 (932)
Q Consensus 174 ~~~~VtaVVvTYNR~~-L~e~L~aLl~QT~~-~~~IiVvdnaStD~t~t~~~l~~~~--~---~~i~~i~~~~-N~GgaG 245 (932)
+.|+|++|||+||... |.+||++|++|+++ ..|||||||+|||+| .++++++. + .++++++.+. +.|..|
T Consensus 38 ~~p~VSVIIpa~Ne~~~L~~~L~sL~~q~yp~~~eIIVVDd~StD~T--~~i~~~~~~~~~~~~~i~vi~~~~~~~g~~G 115 (384)
T TIGR03469 38 AWPAVVAVVPARNEADVIGECVTSLLEQDYPGKLHVILVDDHSTDGT--ADIARAAARAYGRGDRLTVVSGQPLPPGWSG 115 (384)
T ss_pred CCCCEEEEEecCCcHhHHHHHHHHHHhCCCCCceEEEEEeCCCCCcH--HHHHHHHHHhcCCCCcEEEecCCCCCCCCcc
Confidence 5678999999999975 99999999999998 579999999999985 88988752 2 3788887543 344444
Q ss_pred ---chhhh-hhcC-----CcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccc---cccc
Q 046508 246 ---RFQMA-LQTE-----ADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYR---KFRS 313 (932)
Q Consensus 246 ---gF~~a-~~~~-----~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~---~~~s 313 (932)
..+.+ .++. +|||+++|+|++++|++|++++.....+ ..++.+ |. |. ....++.... .+..
T Consensus 116 k~~A~n~g~~~A~~~~~~gd~llflDaD~~~~p~~l~~lv~~~~~~--~~~~vs--~~--~~-~~~~~~~~~~~~~~~~~ 188 (384)
T TIGR03469 116 KLWAVSQGIAAARTLAPPADYLLLTDADIAHGPDNLARLVARARAE--GLDLVS--LM--VR-LRCESFWEKLLIPAFVF 188 (384)
T ss_pred hHHHHHHHHHHHhccCCCCCEEEEECCCCCCChhHHHHHHHHHHhC--CCCEEE--ec--cc-ccCCCHHHHHHHHHHHH
Confidence 23333 3355 9999999999999999999999765311 111221 21 11 1111110000 0000
Q ss_pred cccCcCCCCCCCCccccceEEeccccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCee
Q 046508 314 KEAGLYLPDPAYDITVDKIVQVDFLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSF 381 (932)
Q Consensus 314 ~~~g~~~p~~~y~~~~~rl~~~d~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~ 381 (932)
-.... .|....+....+ ..-..|++.++||+.++.. |+|... .-.||.+|+..+++ +|.++.
T Consensus 189 ~~~~~-~~~~~~~~~~~~--~~~~~G~~~lirr~~~~~vGGf~~~~~--~~~ED~~L~~r~~~-~G~~v~ 252 (384)
T TIGR03469 189 FFQKL-YPFRWVNDPRRR--TAAAAGGCILIRREALERIGGIAAIRG--ALIDDCTLAAAVKR-SGGRIW 252 (384)
T ss_pred HHHHh-cchhhhcCCCcc--ceeecceEEEEEHHHHHHcCCHHHHhh--CcccHHHHHHHHHH-cCCcEE
Confidence 00000 010000000001 1123578899999999998 776322 24799999999999 777764
No 36
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.58 E-value=9.1e-15 Score=163.00 Aligned_cols=194 Identities=13% Similarity=0.106 Sum_probs=128.1
Q ss_pred CCCcEEEEEEcCCchh-HHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhc----CCCceEEEecCCCcccccchh
Q 046508 174 NRPKVTVILNHFKRKT-LCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSY----NDSRISFISSSYDFKYYGRFQ 248 (932)
Q Consensus 174 ~~~~VtaVVvTYNR~~-L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~----~~~~i~~i~~~~N~GgaGgF~ 248 (932)
..|+|++|||+||... |++||+++++|++|..||||+||+|+|.| .++++++ .+.+|+++..+.|.|.+|+..
T Consensus 39 ~~p~VSViiP~~nee~~l~~~L~Sl~~q~Yp~~EIivvdd~s~D~t--~~iv~~~~~~~p~~~i~~v~~~~~~G~~~K~~ 116 (373)
T TIGR03472 39 AWPPVSVLKPLHGDEPELYENLASFCRQDYPGFQMLFGVQDPDDPA--LAVVRRLRADFPDADIDLVIDARRHGPNRKVS 116 (373)
T ss_pred CCCCeEEEEECCCCChhHHHHHHHHHhcCCCCeEEEEEeCCCCCcH--HHHHHHHHHhCCCCceEEEECCCCCCCChHHH
Confidence 4678999999999975 99999999999999999999999999975 7888765 334688898888888666432
Q ss_pred h----hhhcCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcc-cccccccccCcCCCCC
Q 046508 249 M----ALQTEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPS-YRKFRSKEAGLYLPDP 323 (932)
Q Consensus 249 ~----a~~~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~-y~~~~s~~~g~~~p~~ 323 (932)
. .-++++||+.++|+|++|.|++|++++.... + +++-...|. +......+|.. +..... ...+.|..
T Consensus 117 ~l~~~~~~a~ge~i~~~DaD~~~~p~~L~~lv~~~~-~---~~v~~V~~~--~~~~~~~~~~~~l~~~~~--~~~~~~~~ 188 (373)
T TIGR03472 117 NLINMLPHARHDILVIADSDISVGPDYLRQVVAPLA-D---PDVGLVTCL--YRGRPVPGFWSRLGAMGI--NHNFLPSV 188 (373)
T ss_pred HHHHHHHhccCCEEEEECCCCCcChhHHHHHHHHhc-C---CCcceEecc--ccCCCCCCHHHHHHHHHh--hhhhhHHH
Confidence 2 2347899999999999999999999986542 1 111111222 21111122211 000000 01112210
Q ss_pred CCCccccceEEec-cccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeee
Q 046508 324 AYDITVDKIVQVD-FLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVL 383 (932)
Q Consensus 324 ~y~~~~~rl~~~d-~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vl 383 (932)
. . ...+.... ..|++.++||+.++.. |++-.. .-.||++|+..+++ +|.++...
T Consensus 189 ~--~-~~~~~~~~~~~G~~~a~RR~~l~~iGGf~~~~~--~~~ED~~l~~~i~~-~G~~v~~~ 245 (373)
T TIGR03472 189 M--V-ARALGRARFCFGATMALRRATLEAIGGLAALAH--HLADDYWLGELVRA-LGLRVVLA 245 (373)
T ss_pred H--H-HHhccCCccccChhhheeHHHHHHcCChHHhcc--cchHHHHHHHHHHH-cCCeEEec
Confidence 0 0 00011112 3577789999999998 765322 22599999999999 78888643
No 37
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=99.51 E-value=1.9e-13 Score=155.27 Aligned_cols=211 Identities=22% Similarity=0.318 Sum_probs=116.1
Q ss_pred cccccCcCCCceeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcC-------CC-CCCcEE
Q 046508 588 SAALPNWNRMRISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFD-------WP-HGPKTL 659 (932)
Q Consensus 588 ~~sL~aWnk~~i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~-------WP-~g~vtl 659 (932)
......+.. .+||+|||+|||.+|+|+|+||.++......-+|+|+.|+. +.++.+.++.|. .| +.++++
T Consensus 85 ~~~~~~~~~-~~pVlV~AcNRp~yl~r~L~sLl~~rp~~~~fpIiVSQDg~-~~~~~~vi~~y~~~v~~i~~~~~~~i~~ 162 (434)
T PF03071_consen 85 KTNSKNKEP-VIPVLVFACNRPDYLRRTLDSLLKYRPSAEKFPIIVSQDGD-DEEVAEVIKSYGDQVTYIQHPDFSPITI 162 (434)
T ss_dssp -------------EEEEESS-TT-HHHHHHHHHHH-S-TTTS-EEEEE-TT--HHHHHHHHGGGGGSEEEE-S--S----
T ss_pred ccccccCCC-cceEEEEecCCcHHHHHHHHHHHHcCCCCCCccEEEEecCC-cHHHHHHHHHhhhhheeeecCCcCCcee
Confidence 334444544 69999999999999999999999998444456799999985 667888888872 11 112222
Q ss_pred EEeccc----cchhhhh---hhhcccCCCCceEEEEcCCcccChHHHHHHHHHHHHhcCCCCCCCCCeeeEEeeCCcchh
Q 046508 660 RRRIIQ----GGLIRAV---SESWYPASDDDFGLLLEDDIEVSPYFYLWIKYALLAYHYDPQISLPELSSISLYTPRIVE 732 (932)
Q Consensus 660 r~Ri~n----~GLir~V---lEsf~P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl~Y~ys~~v~~~~L~GISLy~p~~~e 732 (932)
..+..+ .++.+.. +.-......+++|||||||+++||.||.|++.++--|..++++ +.||.++-.-.+
T Consensus 163 ~~~~~~~~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~~~~ll~~D~sl-----~ciSawNdnG~~ 237 (434)
T PF03071_consen 163 PPKEKKFKGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSATLPLLENDPSL-----WCISAWNDNGKE 237 (434)
T ss_dssp -TT-GGGHHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHHHHHHHHH-TTE-----EEEES--TT-BG
T ss_pred CcccccccchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHHHHHHHhcCCCe-----EEEEccccCCcc
Confidence 211100 1122211 2222223357889999999999999999999999999988765 999999763221
Q ss_pred hcccCCCCcccccccCCCCCCCeeeccCCCccccccchhhHhHHhHhhhcccccccCCCCccCCcccccchhhHHHHHHH
Q 046508 733 VVKERPKWNATEFFKHIHPNTPYLHQLPCSWGAVFFPKQWREFYVYMHMRFTEDAKANPVQIPKSRTNGWQASWKKFLID 812 (932)
Q Consensus 733 ~~~~rp~~~~t~~~~~~~~~~~FL~Q~P~SWG~l~f~d~W~eFh~yls~rl~~~~~~~p~~ip~~~sn~W~~SW~kylle 812 (932)
.+.....+...|..-.-.+|||+.+.+.|.|+.. .-|+ .-|=.+|-.
T Consensus 238 -----------~~~~~~~~~~lyRsdffpglGWml~r~~w~el~~---------------~Wp~-------~~WDdwmR~ 284 (434)
T PF03071_consen 238 -----------HFVDDSRPSLLYRSDFFPGLGWMLTRELWDELEP---------------KWPK-------AFWDDWMRQ 284 (434)
T ss_dssp -----------GGS-TT-TT-EEEESS---SSEEEEHHHHHHHGG---------------G--S-------S-HHHHHTS
T ss_pred -----------ccccCCCccceEecccCCchHHHhhHHHHHhhcc---------------cCCC-------CCchhhhcC
Confidence 1111112345666667789999999999987542 0121 126556666
Q ss_pred HHHHhCcEEeccCCCCCCcceeeccCCCCC
Q 046508 813 MMYLRGYVSLYPNFPNQASFSTNHMEPGAH 842 (932)
Q Consensus 813 l~~lRGY~~LYPnf~~~~SlsTnH~E~G~h 842 (932)
=..-+|=.+++|- .|-+.++.+.|..
T Consensus 285 ~~~rkgR~cIrPe----isRt~~fg~~G~s 310 (434)
T PF03071_consen 285 PEQRKGRQCIRPE----ISRTYHFGKKGVS 310 (434)
T ss_dssp HHHHTT-EEEEES----SBSEEE--SSSSS
T ss_pred ccccCCCceeecc----CCCccccCcCCcc
Confidence 6678899999995 4555556666654
No 38
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.46 E-value=5.9e-13 Score=141.24 Aligned_cols=98 Identities=14% Similarity=0.175 Sum_probs=78.6
Q ss_pred CcEEEEEEcCCchh-HHHHHHHHHcC---CCCCceEEEEeCCCCChhhHHHHHhhcCC-CceEEEecCCCcccccchhhh
Q 046508 176 PKVTVILNHFKRKT-LCAQLDSLLQQ---TLPFQHVWVLSFGSPNELSLKRIVNSYND-SRISFISSSYDFKYYGRFQMA 250 (932)
Q Consensus 176 ~~VtaVVvTYNR~~-L~e~L~aLl~Q---T~~~~~IiVvdnaStD~t~t~~~l~~~~~-~~i~~i~~~~N~GgaGgF~~a 250 (932)
|+|++||||||... |.+||++|++| +.+..|||||||||||+| .++++++.. .+++++..+ |.|.++.-+.+
T Consensus 1 ~~vSVIi~~yN~~~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t--~~i~~~~~~~~~i~~i~~~-~~G~~~A~N~G 77 (248)
T PRK10063 1 MLLSVITVAFRNLEGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGT--REFLENLNGIFNLRFVSEP-DNGIYDAMNKG 77 (248)
T ss_pred CeEEEEEEeCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccH--HHHHHHhcccCCEEEEECC-CCCHHHHHHHH
Confidence 47999999999974 99999999854 456779999999999985 999999843 468888765 66866655555
Q ss_pred hh-cCCcEEEEEcCCCCCchhHHHHHH
Q 046508 251 LQ-TEADLVYIVDDDMIPGRKMLQILS 276 (932)
Q Consensus 251 ~~-~~~dyVwimDDD~IP~~~~Le~Ll 276 (932)
++ +.+|||++||+|+++.|++++.+.
T Consensus 78 i~~a~g~~v~~ld~DD~~~~~~~~~~~ 104 (248)
T PRK10063 78 IAMAQGRFALFLNSGDIFHQDAANFVR 104 (248)
T ss_pred HHHcCCCEEEEEeCCcccCcCHHHHHH
Confidence 44 789999999988888888765443
No 39
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.45 E-value=2.3e-13 Score=133.11 Aligned_cols=97 Identities=16% Similarity=0.205 Sum_probs=86.5
Q ss_pred EEEEcCCchh-HHHHHHHHHcCCC--CCceEEEEeCCCCChhhHHHHHhhc--CCCceEEEecCCCcccccchhhhhh-c
Q 046508 180 VILNHFKRKT-LCAQLDSLLQQTL--PFQHVWVLSFGSPNELSLKRIVNSY--NDSRISFISSSYDFKYYGRFQMALQ-T 253 (932)
Q Consensus 180 aVVvTYNR~~-L~e~L~aLl~QT~--~~~~IiVvdnaStD~t~t~~~l~~~--~~~~i~~i~~~~N~GgaGgF~~a~~-~ 253 (932)
+||++||+.. |++||++|.+|++ ...+|||+||+|+|++ .++++++ +...++++..+.|.|.+++++.+++ +
T Consensus 1 iii~~~n~~~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~--~~~~~~~~~~~~~~~~~~~~~n~G~~~a~n~g~~~a 78 (185)
T cd04179 1 VVIPAYNEEENIPELVERLLAVLEEGYDYEIIVVDDGSTDGT--AEIARELAARVPRVRVIRLSRNFGKGAAVRAGFKAA 78 (185)
T ss_pred CeecccChHhhHHHHHHHHHHHhccCCCEEEEEEcCCCCCCh--HHHHHHHHHhCCCeEEEEccCCCCccHHHHHHHHHh
Confidence 5899999974 9999999999987 6899999999999975 8899886 3456789999999998888888766 6
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHhh
Q 046508 254 EADLVYIVDDDMIPGRKMLQILSHV 278 (932)
Q Consensus 254 ~~dyVwimDDD~IP~~~~Le~Ll~~ 278 (932)
.+|||+++|+|+++.|++|++|+..
T Consensus 79 ~gd~i~~lD~D~~~~~~~l~~l~~~ 103 (185)
T cd04179 79 RGDIVVTMDADLQHPPEDIPKLLEK 103 (185)
T ss_pred cCCEEEEEeCCCCCCHHHHHHHHHH
Confidence 7899999999999999999999976
No 40
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=99.44 E-value=4.4e-13 Score=163.34 Aligned_cols=191 Identities=19% Similarity=0.294 Sum_probs=126.2
Q ss_pred CCCcEEEEEEcCCch-h-HHHHHHHHHcCCCCC--ceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCCccc-ccchh
Q 046508 174 NRPKVTVILNHFKRK-T-LCAQLDSLLQQTLPF--QHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYDFKY-YGRFQ 248 (932)
Q Consensus 174 ~~~~VtaVVvTYNR~-~-L~e~L~aLl~QT~~~--~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N~Gg-aGgF~ 248 (932)
..|+|++||||||-. . ++++|.++++|++|. .||||+||||+|++ .++.+++ .++|+..+.|.|+ ||.-+
T Consensus 258 ~~P~VsViIPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t--~~la~~~---~v~yI~R~~n~~gKAGnLN 332 (852)
T PRK11498 258 LWPTVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEF--RQFAQEV---GVKYIARPTHEHAKAGNIN 332 (852)
T ss_pred CCCcEEEEEecCCCcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHH--HHHHHHC---CcEEEEeCCCCcchHHHHH
Confidence 557999999999997 4 788999999999985 48999999999985 8888776 4889988877775 55556
Q ss_pred hhhh-cCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCC---CCcccccccccccCcCCCCCC
Q 046508 249 MALQ-TEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDF---TFPSYRKFRSKEAGLYLPDPA 324 (932)
Q Consensus 249 ~a~~-~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~---~f~~y~~~~s~~~g~~~p~~~ 324 (932)
.|++ +++|||.++|.|++|.+++|++++...-.+.-.. ++ .|...-+ ..|. .+..++...+ + |. .-
T Consensus 333 ~aL~~a~GEyIavlDAD~ip~pdfL~~~V~~f~~dP~Vg-lV--Qtp~~f~-n~dp~~rnl~~~~~~~~-e-~~----~f 402 (852)
T PRK11498 333 NALKYAKGEFVAIFDCDHVPTRSFLQMTMGWFLKDKKLA-MM--QTPHHFF-SPDPFERNLGRFRKTPN-E-GT----LF 402 (852)
T ss_pred HHHHhCCCCEEEEECCCCCCChHHHHHHHHHHHhCCCeE-EE--Ecceecc-CCchHHHhhHHHhhccc-c-hh----HH
Confidence 6655 7899999999999999999999875321111111 11 1111001 1111 1111111111 0 00 00
Q ss_pred CCcc--ccceEEec-cccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeeec
Q 046508 325 YDIT--VDKIVQVD-FLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 325 y~~~--~~rl~~~d-~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
|+.- -.....+. +.|++.++||+.++.. |+|.-. .||+++|..+++ +|..+..+|
T Consensus 403 y~~iq~g~~~~~a~~~~Gs~aviRReaLeeVGGfd~~ti----tED~dlslRL~~-~Gyrv~yl~ 462 (852)
T PRK11498 403 YGLVQDGNDMWDATFFCGSCAVIRRKPLDEIGGIAVETV----TEDAHTSLRLHR-RGYTSAYMR 462 (852)
T ss_pred HHHHHhHHHhhcccccccceeeeEHHHHHHhcCCCCCcc----CccHHHHHHHHH-cCCEEEEEe
Confidence 1100 00011222 4466778899999998 877633 599999999998 898887664
No 41
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.44 E-value=5.5e-13 Score=122.72 Aligned_cols=102 Identities=23% Similarity=0.252 Sum_probs=87.0
Q ss_pred CCcEEEEEEcCCchh-HHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCC--CceEEEecCCCcccccchhhhh
Q 046508 175 RPKVTVILNHFKRKT-LCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYND--SRISFISSSYDFKYYGRFQMAL 251 (932)
Q Consensus 175 ~~~VtaVVvTYNR~~-L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~--~~i~~i~~~~N~GgaGgF~~a~ 251 (932)
.++|++||+|||+.. |.+||+++++||+...+||||||||||+| .++++++.. .++.......|.|.+..++.+.
T Consensus 2 ~~~~siiip~~n~~~~l~~~l~s~~~q~~~~~eiivvddgs~d~t--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 79 (291)
T COG0463 2 MPKVSVVIPTYNEEEYLPEALESLLNQTYKDFEIIVVDDGSTDGT--TEIAIEYGAKDVRVIRLINERNGGLGAARNAGL 79 (291)
T ss_pred CccEEEEEeccchhhhHHHHHHHHHhhhhcceEEEEEeCCCCCCh--HHHHHHHhhhcceEEEeecccCCChHHHHHhhH
Confidence 468999999999985 99999999999998888999999999985 889988844 3677888889999777776665
Q ss_pred h-cCCcEEEEEcCCCCCchhHHHHHHhhc
Q 046508 252 Q-TEADLVYIVDDDMIPGRKMLQILSHVA 279 (932)
Q Consensus 252 ~-~~~dyVwimDDD~IP~~~~Le~Ll~~~ 279 (932)
. +.+|||.++|+|.+ .+..+..+.+..
T Consensus 80 ~~~~~~~~~~~d~d~~-~~~~~~~~~~~~ 107 (291)
T COG0463 80 EYARGDYIVFLDADDQ-HPPELIPLVAAG 107 (291)
T ss_pred HhccCCEEEEEccCCC-CCHHHHHHHHHh
Confidence 4 67899999999999 999988865543
No 42
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=99.43 E-value=3e-13 Score=163.13 Aligned_cols=199 Identities=18% Similarity=0.253 Sum_probs=124.9
Q ss_pred CCCcEEEEEEcCCch-h-HHHHHHHHHcCCCC--CceEEEEeCCCCChhh------------HHHHHhhc-CCCceEEEe
Q 046508 174 NRPKVTVILNHFKRK-T-LCAQLDSLLQQTLP--FQHVWVLSFGSPNELS------------LKRIVNSY-NDSRISFIS 236 (932)
Q Consensus 174 ~~~~VtaVVvTYNR~-~-L~e~L~aLl~QT~~--~~~IiVvdnaStD~t~------------t~~~l~~~-~~~~i~~i~ 236 (932)
..|+|++||||||.. . ++++|+++++|++| ..+|||+||||||+|. ..+.++++ ....++|+.
T Consensus 129 ~~P~VsViIP~yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~~~v~yi~ 208 (713)
T TIGR03030 129 EWPTVDVFIPTYNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRKLGVNYIT 208 (713)
T ss_pred cCCeeEEEEcCCCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHHcCcEEEE
Confidence 557899999999996 4 57799999999998 4599999999999751 01233333 234689999
Q ss_pred cCCCccc-ccchhhhhh-cCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCC---CCcccccc
Q 046508 237 SSYDFKY-YGRFQMALQ-TEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDF---TFPSYRKF 311 (932)
Q Consensus 237 ~~~N~Gg-aGgF~~a~~-~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~---~f~~y~~~ 311 (932)
.+.|.|+ ||+-+.|++ +++|||+++|.|++|.|++|++++.....+ +.+-...+....+ ..|. +...+++.
T Consensus 209 r~~n~~~KAgnLN~al~~a~gd~Il~lDAD~v~~pd~L~~~v~~f~~d---p~v~~Vqtp~~f~-~p~~~~~nl~~~~~~ 284 (713)
T TIGR03030 209 RPRNVHAKAGNINNALKHTDGELILIFDADHVPTRDFLQRTVGWFVED---PKLFLVQTPHFFV-SPDPIERNLGTFRRM 284 (713)
T ss_pred CCCCCCCChHHHHHHHHhcCCCEEEEECCCCCcChhHHHHHHHHHHhC---CCEEEEeCCeecc-CCCHHhhhhHHHHHh
Confidence 9989876 666577765 789999999999999999999998653211 1111111111111 1110 00001000
Q ss_pred cccccCcCCCCCCCCccccceEEeccccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeeec
Q 046508 312 RSKEAGLYLPDPAYDITVDKIVQVDFLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 312 ~s~~~g~~~p~~~y~~~~~rl~~~d~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
.+.....|.+ .....+.....-+.|++.++||+.++.. |.+..+ .||++++..+++ +|..+..+|
T Consensus 285 ~~e~~~f~~~---i~~g~~~~~~~~~~Gs~~~iRR~al~~iGGf~~~~v----tED~~l~~rL~~-~G~~~~y~~ 351 (713)
T TIGR03030 285 PNENELFYGL---IQDGNDFWNAAFFCGSAAVLRREALDEIGGIAGETV----TEDAETALKLHR-RGWNSAYLD 351 (713)
T ss_pred hhHHHHHHHH---HHHHHhhhCCeeecCceeEEEHHHHHHcCCCCCCCc----CcHHHHHHHHHH-cCCeEEEec
Confidence 0000000000 0000001111224578889999999988 766544 589999999998 899976654
No 43
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=99.41 E-value=2.6e-12 Score=140.85 Aligned_cols=116 Identities=20% Similarity=0.164 Sum_probs=90.2
Q ss_pred CcccHHHHHccccccccCCCCCCcEEEEEEcCCchh-HHHHHHHHHcCCC--CCceEEEEeCCCCChhhHHHHHhhcCCC
Q 046508 154 GTETLNELMAMKSKWDLKGPNRPKVTVILNHFKRKT-LCAQLDSLLQQTL--PFQHVWVLSFGSPNELSLKRIVNSYNDS 230 (932)
Q Consensus 154 ~~~~~~~~~~~~s~~~~~~~~~~~VtaVVvTYNR~~-L~e~L~aLl~QT~--~~~~IiVvdnaStD~t~t~~~l~~~~~~ 230 (932)
..-++.+|++++ ..++|++|||+||... |.+||++|.+|+. ...+||||||||||+| .++++++...
T Consensus 17 ~~~~~~~~~~~~--------~~~~vSVVIPayNee~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T--~~ia~~~~~~ 86 (306)
T PRK13915 17 PDWTIEELVAAK--------AGRTVSVVLPALNEEETVGKVVDSIRPLLMEPLVDELIVIDSGSTDAT--AERAAAAGAR 86 (306)
T ss_pred ccCCHHHHHhcc--------CCCCEEEEEecCCcHHHHHHHHHHHHHHhccCCCcEEEEEeCCCccHH--HHHHHHhcch
Confidence 344788999988 6789999999999975 9999999999975 3679999999999975 8888876321
Q ss_pred ---ceE-EEecCCCcccccchhhhh-hcCCcEEEEEcCCCC-CchhHHHHHHhhc
Q 046508 231 ---RIS-FISSSYDFKYYGRFQMAL-QTEADLVYIVDDDMI-PGRKMLQILSHVA 279 (932)
Q Consensus 231 ---~i~-~i~~~~N~GgaGgF~~a~-~~~~dyVwimDDD~I-P~~~~Le~Ll~~~ 279 (932)
+.. +...+.|.|.++..+.++ .+++|||.+||.|++ +.|++|++|+...
T Consensus 87 v~~~~~~~~~~~~n~Gkg~A~~~g~~~a~gd~vv~lDaD~~~~~p~~l~~l~~~l 141 (306)
T PRK13915 87 VVSREEILPELPPRPGKGEALWRSLAATTGDIVVFVDADLINFDPMFVPGLLGPL 141 (306)
T ss_pred hhcchhhhhccccCCCHHHHHHHHHHhcCCCEEEEEeCccccCCHHHHHHHHHHH
Confidence 111 112467777544444444 478999999999997 8999999998653
No 44
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=99.38 E-value=2.4e-12 Score=142.46 Aligned_cols=201 Identities=12% Similarity=0.128 Sum_probs=132.3
Q ss_pred CCCcEEEEEEcCCchh-HHHHHHHHHcCCC-------C-CceEEEEeCCCCChhhHHHHHhhcC------CCceEEEecC
Q 046508 174 NRPKVTVILNHFKRKT-LCAQLDSLLQQTL-------P-FQHVWVLSFGSPNELSLKRIVNSYN------DSRISFISSS 238 (932)
Q Consensus 174 ~~~~VtaVVvTYNR~~-L~e~L~aLl~QT~-------~-~~~IiVvdnaStD~t~t~~~l~~~~------~~~i~~i~~~ 238 (932)
..++|++|||+||... |.++|+++.+|.. . ..|||||||||+|+| .++++++. +.+++++..+
T Consensus 68 ~~~~isVVIP~yNe~~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T--~~i~~~~~~~~~~~~~~i~vi~~~ 145 (333)
T PTZ00260 68 SDVDLSIVIPAYNEEDRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKT--LKVAKDFWRQNINPNIDIRLLSLL 145 (333)
T ss_pred CCeEEEEEEeeCCCHHHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCch--HHHHHHHHHhcCCCCCcEEEEEcC
Confidence 5668999999999974 9999998877532 2 579999999999985 88988762 2469999999
Q ss_pred CCcccccchhhhhh-cCCcEEEEEcCCCCCchhHHHHHHhhccc--cccccccccccccccccCCCCCCCcccccccccc
Q 046508 239 YDFKYYGRFQMALQ-TEADLVYIVDDDMIPGRKMLQILSHVAGT--EKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKE 315 (932)
Q Consensus 239 ~N~GgaGgF~~a~~-~~~dyVwimDDD~IP~~~~Le~Ll~~~g~--~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~ 315 (932)
.|.|.++..+.++. +.+|||++||.|+...++.+++|++.... +....-|.|+..+. +-......-.-||++.++-
T Consensus 146 ~N~G~~~A~~~Gi~~a~gd~I~~~DaD~~~~~~~l~~l~~~l~~~~~~~~dvV~GsR~~~-~~~~~~~~~~~~r~~~~~~ 224 (333)
T PTZ00260 146 RNKGKGGAVRIGMLASRGKYILMVDADGATDIDDFDKLEDIMLKIEQNGLGIVFGSRNHL-VDSDVVAKRKWYRNILMYG 224 (333)
T ss_pred CCCChHHHHHHHHHHccCCEEEEEeCCCCCCHHHHHHHHHHHHHhhccCCceEEeecccc-ccCcccccCcHHHHHHHHH
Confidence 99997666666655 68999999999999999999888865421 11112244543221 0000000111233332221
Q ss_pred cCcCCCCCCCCccccceEEeccccccccccHHHHHHhhcc-CCCcccchhhHHHHHHHHHhcCCCeeeeccC
Q 046508 316 AGLYLPDPAYDITVDKIVQVDFLSSSWFLSAELVKTLFIE-TPFTFMTGEDLHLSYQLQKYRNAGSFVLPVD 386 (932)
Q Consensus 316 ~g~~~p~~~y~~~~~rl~~~d~l~~~wf~~re~l~~~f~E-~~~~~~t~eDlhLs~~~~ky~~i~~~vlp~~ 386 (932)
... + .+. ....--.|..|+--+++|+.++.++.+ +.-.| +.|+.+-+.+.+ .|.++.-+|+.
T Consensus 225 ~~~-l----~~~-~~~~~i~D~~~Gfk~~~r~~~~~i~~~~~~~~~--~fd~Ell~~a~~-~g~~I~EvPv~ 287 (333)
T PTZ00260 225 FHF-I----VNT-ICGTNLKDTQCGFKLFTRETARIIFPSLHLERW--AFDIEIVMIAQK-LNLPIAEVPVN 287 (333)
T ss_pred HHH-H----HHH-HcCCCcccCCCCeEEEeHHHHHHHhhhccccCc--cchHHHHHHHHH-cCCCEEEEcee
Confidence 000 0 000 001123477888889999999988754 34334 357788778777 79999888884
No 45
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=99.38 E-value=1.5e-12 Score=128.36 Aligned_cols=97 Identities=15% Similarity=0.197 Sum_probs=82.6
Q ss_pred EEEEcCCchh-HHHHHHHHHcCC---CCCceEEEEeCCCCChhhHHHHHhhc--CCCceEEEecCCCcccccchhhhhh-
Q 046508 180 VILNHFKRKT-LCAQLDSLLQQT---LPFQHVWVLSFGSPNELSLKRIVNSY--NDSRISFISSSYDFKYYGRFQMALQ- 252 (932)
Q Consensus 180 aVVvTYNR~~-L~e~L~aLl~QT---~~~~~IiVvdnaStD~t~t~~~l~~~--~~~~i~~i~~~~N~GgaGgF~~a~~- 252 (932)
+||||||+.. |.++|++|.+|+ ....+|+||||||+|+| .++++++ ..++++++....|.|.+++.+.++.
T Consensus 1 viIp~~n~~~~l~~~l~sl~~~~~~~~~~~eiivvdd~s~d~t--~~~~~~~~~~~~~i~~i~~~~n~G~~~a~n~g~~~ 78 (181)
T cd04187 1 IVVPVYNEEENLPELYERLKAVLESLGYDYEIIFVDDGSTDRT--LEILRELAARDPRVKVIRLSRNFGQQAALLAGLDH 78 (181)
T ss_pred CEEeecCchhhHHHHHHHHHHHHHhcCCCeEEEEEeCCCCccH--HHHHHHHHhhCCCEEEEEecCCCCcHHHHHHHHHh
Confidence 5899999975 888888887654 46779999999999985 8888876 3457999999999998777776654
Q ss_pred cCCcEEEEEcCCCCCchhHHHHHHhh
Q 046508 253 TEADLVYIVDDDMIPGRKMLQILSHV 278 (932)
Q Consensus 253 ~~~dyVwimDDD~IP~~~~Le~Ll~~ 278 (932)
+.+|||+++|+|+.+.+++|++++..
T Consensus 79 a~~d~i~~~D~D~~~~~~~l~~l~~~ 104 (181)
T cd04187 79 ARGDAVITMDADLQDPPELIPEMLAK 104 (181)
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHH
Confidence 78999999999999999999999976
No 46
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=99.35 E-value=3.9e-12 Score=131.91 Aligned_cols=95 Identities=15% Similarity=0.181 Sum_probs=80.1
Q ss_pred cEEEEEEcCCchh-HHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCCcccccchhhhhh-cC
Q 046508 177 KVTVILNHFKRKT-LCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYDFKYYGRFQMALQ-TE 254 (932)
Q Consensus 177 ~VtaVVvTYNR~~-L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N~GgaGgF~~a~~-~~ 254 (932)
+|++||+|||... |.+||++|..|+ .+||||||||||+| .+++++++ ++++.. .|.|.++..+.++. +.
T Consensus 1 ~isvii~~~Ne~~~l~~~l~sl~~~~---~eiivvD~gStD~t--~~i~~~~~---~~v~~~-~~~g~~~~~n~~~~~a~ 71 (229)
T cd02511 1 TLSVVIITKNEERNIERCLESVKWAV---DEIIVVDSGSTDRT--VEIAKEYG---AKVYQR-WWDGFGAQRNFALELAT 71 (229)
T ss_pred CEEEEEEeCCcHHHHHHHHHHHhccc---CEEEEEeCCCCccH--HHHHHHcC---CEEEEC-CCCChHHHHHHHHHhCC
Confidence 4899999999975 999999999885 49999999999985 89998764 556666 78886666666654 78
Q ss_pred CcEEEEEcCCCCCchhHHHHHHhhcc
Q 046508 255 ADLVYIVDDDMIPGRKMLQILSHVAG 280 (932)
Q Consensus 255 ~dyVwimDDD~IP~~~~Le~Ll~~~g 280 (932)
+|||+++|+|.++.+++++++.....
T Consensus 72 ~d~vl~lDaD~~~~~~~~~~l~~~~~ 97 (229)
T cd02511 72 NDWVLSLDADERLTPELADEILALLA 97 (229)
T ss_pred CCEEEEEeCCcCcCHHHHHHHHHHHh
Confidence 99999999999999999999987654
No 47
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.31 E-value=6.5e-12 Score=126.65 Aligned_cols=97 Identities=20% Similarity=0.239 Sum_probs=77.4
Q ss_pred EEEEcCCchh-HHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHh-hcCCCceEEEecC---CCcccccchhhhhh-c
Q 046508 180 VILNHFKRKT-LCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVN-SYNDSRISFISSS---YDFKYYGRFQMALQ-T 253 (932)
Q Consensus 180 aVVvTYNR~~-L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~-~~~~~~i~~i~~~---~N~GgaGgF~~a~~-~ 253 (932)
+|||+||... |.+||++|++|+ +..+||||||+|+|+| .++++ ...+++++++... .|.|.++.-+.+++ +
T Consensus 1 ViIp~~Ne~~~l~~~l~sl~~~~-~~~eIivvdd~S~D~t--~~~~~~~~~~~~v~~i~~~~~~~~~Gk~~aln~g~~~~ 77 (191)
T cd06436 1 VLVPCLNEEAVIQRTLASLLRNK-PNFLVLVIDDASDDDT--AGIVRLAITDSRVHLLRRHLPNARTGKGDALNAAYDQI 77 (191)
T ss_pred CEEeccccHHHHHHHHHHHHhCC-CCeEEEEEECCCCcCH--HHHHhheecCCcEEEEeccCCcCCCCHHHHHHHHHHHH
Confidence 5899999975 999999999999 8889999999999985 88887 3344678888763 45665544444433 1
Q ss_pred -----------CCcEEEEEcCCCCCchhHHHHHHhhc
Q 046508 254 -----------EADLVYIVDDDMIPGRKMLQILSHVA 279 (932)
Q Consensus 254 -----------~~dyVwimDDD~IP~~~~Le~Ll~~~ 279 (932)
.+|||+++|.|+++.|++|+++....
T Consensus 78 ~~~~~~~g~~~~~d~v~~~DaD~~~~~~~l~~~~~~~ 114 (191)
T cd06436 78 RQILIEEGADPERVIIAVIDADGRLDPNALEAVAPYF 114 (191)
T ss_pred hhhccccccCCCccEEEEECCCCCcCHhHHHHHHHhh
Confidence 24899999999999999999987654
No 48
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=99.22 E-value=1.3e-10 Score=106.47 Aligned_cols=95 Identities=23% Similarity=0.291 Sum_probs=81.4
Q ss_pred EEEEcCCchh-HHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCC--CceEEEecCCCcccccchhhhhh-cCC
Q 046508 180 VILNHFKRKT-LCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYND--SRISFISSSYDFKYYGRFQMALQ-TEA 255 (932)
Q Consensus 180 aVVvTYNR~~-L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~--~~i~~i~~~~N~GgaGgF~~a~~-~~~ 255 (932)
+||++||++. |.++|+++++|++++.+|+|+||+|++++ .+++.+... ..+.++....+.|.++..+.++. .++
T Consensus 1 iii~~~~~~~~l~~~l~s~~~~~~~~~~i~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 78 (156)
T cd00761 1 VIIPAYNEEPYLERCLESLLAQTYPNFEVIVVDDGSTDGT--LEILEEYAKKDPRVIRVINEENQGLAAARNAGLKAARG 78 (156)
T ss_pred CEEeecCcHHHHHHHHHHHHhCCccceEEEEEeCCCCccH--HHHHHHHHhcCCCeEEEEecCCCChHHHHHHHHHHhcC
Confidence 5899999974 99999999999988999999999999975 777776522 45778888889998887777755 579
Q ss_pred cEEEEEcCCCCCchhHHHHHH
Q 046508 256 DLVYIVDDDMIPGRKMLQILS 276 (932)
Q Consensus 256 dyVwimDDD~IP~~~~Le~Ll 276 (932)
|||.+||+|+++.++.++.++
T Consensus 79 d~v~~~d~D~~~~~~~~~~~~ 99 (156)
T cd00761 79 EYILFLDADDLLLPDWLERLV 99 (156)
T ss_pred CEEEEECCCCccCccHHHHHH
Confidence 999999999999999999974
No 49
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.21 E-value=1.3e-10 Score=129.78 Aligned_cols=192 Identities=22% Similarity=0.256 Sum_probs=125.3
Q ss_pred CcEEEEEEcCCch--hHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCC---CceEEEec-CCCcccccchhh
Q 046508 176 PKVTVILNHFKRK--TLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYND---SRISFISS-SYDFKYYGRFQM 249 (932)
Q Consensus 176 ~~VtaVVvTYNR~--~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~---~~i~~i~~-~~N~GgaGgF~~ 249 (932)
|+|++|||+||=. .++++|+++++|.+|..+||||||+|+|++ .++++++.. ++++++.. ..|.|=+|-.+.
T Consensus 54 p~vsviiP~ynE~~~~~~~~l~s~~~~dyp~~evivv~d~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~gK~~al~~ 131 (439)
T COG1215 54 PKVSVIIPAYNEEPEVLEETLESLLSQDYPRYEVIVVDDGSTDET--YEILEELGAEYGPNFRVIYPEKKNGGKAGALNN 131 (439)
T ss_pred CceEEEEecCCCchhhHHHHHHHHHhCCCCCceEEEECCCCChhH--HHHHHHHHhhcCcceEEEeccccCccchHHHHH
Confidence 7999999999995 399999999999999999999999999985 899988722 25566543 455554666666
Q ss_pred hhh-cCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCC--CCcccccccccc-cCcCCCCCCC
Q 046508 250 ALQ-TEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDF--TFPSYRKFRSKE-AGLYLPDPAY 325 (932)
Q Consensus 250 a~~-~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~--~f~~y~~~~s~~-~g~~~p~~~y 325 (932)
+++ +++|+|.++|-|++|++|+|.+++..... +.+.+..|....+...|. .......+.-.- .....+
T Consensus 132 ~l~~~~~d~V~~~DaD~~~~~d~l~~~~~~f~~----~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---- 203 (439)
T COG1215 132 GLKRAKGDVVVILDADTVPEPDALRELVSPFED----PPVGAVVGTPRIRNRPDPSNLLGRIQAIEYLSAFYFRLR---- 203 (439)
T ss_pred HHhhcCCCEEEEEcCCCCCChhHHHHHHhhhcC----CCeeEEeCCceeeecCChhhhcchhcchhhhhhHHHhhh----
Confidence 655 57999999999999999999999866441 112223343222211110 000000000000 000000
Q ss_pred Cccccce-EEeccccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeeec
Q 046508 326 DITVDKI-VQVDFLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 326 ~~~~~rl-~~~d~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
...+. .-.=+.|++-.+||+.|+.. +.+.-+ .||.+|+..+.. .|..+..+|
T Consensus 204 --~~~~~g~~~~~~G~~~~~rr~aL~~~g~~~~~~i----~ED~~lt~~l~~-~G~~~~~~~ 258 (439)
T COG1215 204 --AASKGGLISFLSGSSSAFRRSALEEVGGWLEDTI----TEDADLTLRLHL-RGYRVVYVP 258 (439)
T ss_pred --hhhhcCCeEEEcceeeeEEHHHHHHhCCCCCCce----eccHHHHHHHHH-CCCeEEEee
Confidence 00001 12224567778999999887 455544 799999999997 888886553
No 50
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.19 E-value=5.7e-11 Score=118.24 Aligned_cols=97 Identities=13% Similarity=0.182 Sum_probs=74.6
Q ss_pred EEEEcCCchh-HHHHHHHHHcCCCC--CceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCCcccccc----hhhhh-
Q 046508 180 VILNHFKRKT-LCAQLDSLLQQTLP--FQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYDFKYYGR----FQMAL- 251 (932)
Q Consensus 180 aVVvTYNR~~-L~e~L~aLl~QT~~--~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N~GgaGg----F~~a~- 251 (932)
+|||+||... |.+||++|++|++| ..+||||||+|+|+| .++++++.. .+.......|.|-++. +..+.
T Consensus 1 VvIp~~ne~~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t--~~~~~~~~~-~~~~~~~~~~~gk~~aln~g~~~a~~ 77 (183)
T cd06438 1 ILIPAHNEEAVIGNTVRSLKAQDYPRELYRIFVVADNCTDDT--AQVARAAGA-TVLERHDPERRGKGYALDFGFRHLLN 77 (183)
T ss_pred CEEeccchHHHHHHHHHHHHhcCCCCcccEEEEEeCCCCchH--HHHHHHcCC-eEEEeCCCCCCCHHHHHHHHHHHHHh
Confidence 6899999975 99999999999985 478999999999975 888877643 2434444556663322 22222
Q ss_pred -hcCCcEEEEEcCCCCCchhHHHHHHhhc
Q 046508 252 -QTEADLVYIVDDDMIPGRKMLQILSHVA 279 (932)
Q Consensus 252 -~~~~dyVwimDDD~IP~~~~Le~Ll~~~ 279 (932)
..++|||+++|.|+++.|++|++++...
T Consensus 78 ~~~~~d~v~~~DaD~~~~p~~l~~l~~~~ 106 (183)
T cd06438 78 LADDPDAVVVFDADNLVDPNALEELNARF 106 (183)
T ss_pred cCCCCCEEEEEcCCCCCChhHHHHHHHHH
Confidence 2469999999999999999999998765
No 51
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=99.18 E-value=1.2e-10 Score=128.45 Aligned_cols=182 Identities=17% Similarity=0.182 Sum_probs=117.6
Q ss_pred CcEEEEEEcCCchh-HHHHHHHH---HcCCCCCceEEEEeCCCCChhhHHHHHhhcC---CCceEEEecCCCcccccchh
Q 046508 176 PKVTVILNHFKRKT-LCAQLDSL---LQQTLPFQHVWVLSFGSPNELSLKRIVNSYN---DSRISFISSSYDFKYYGRFQ 248 (932)
Q Consensus 176 ~~VtaVVvTYNR~~-L~e~L~aL---l~QT~~~~~IiVvdnaStD~t~t~~~l~~~~---~~~i~~i~~~~N~GgaGgF~ 248 (932)
+++++|||+||... |.++|++| ++|+....|||||||||+|+| .++++++. +.+++.+....|.|-++..+
T Consensus 6 ~~vSVVIP~yNE~~~i~~~l~~l~~~~~~~~~~~EIIvVDDgS~D~T--~~il~~~~~~~~~~v~~i~~~~n~G~~~A~~ 83 (325)
T PRK10714 6 KKVSVVIPVYNEQESLPELIRRTTAACESLGKEYEILLIDDGSSDNS--AEMLVEAAQAPDSHIVAILLNRNYGQHSAIM 83 (325)
T ss_pred CeEEEEEcccCchhhHHHHHHHHHHHHHhCCCCEEEEEEeCCCCCcH--HHHHHHHHhhcCCcEEEEEeCCCCCHHHHHH
Confidence 47999999999974 88887766 456666789999999999985 88987752 35677777888998544444
Q ss_pred hh-hhcCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcCCCCCCCCc
Q 046508 249 MA-LQTEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDI 327 (932)
Q Consensus 249 ~a-~~~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~~ 327 (932)
.+ .++++|||.+||+|+..+|+.++++++... +.+ . +.+ |+. -. ..+ +-+|++.++- ++.
T Consensus 84 ~G~~~A~gd~vv~~DaD~q~~p~~i~~l~~~~~-~~~-D-vV~--~~r-~~-~~~---~~~r~~~s~~---------~~~ 144 (325)
T PRK10714 84 AGFSHVTGDLIITLDADLQNPPEEIPRLVAKAD-EGY-D-VVG--TVR-QN-RQD---SWFRKTASKM---------INR 144 (325)
T ss_pred HHHHhCCCCEEEEECCCCCCCHHHHHHHHHHHH-hhC-C-EEE--EEE-cC-CCC---cHHHHHHHHH---------HHH
Confidence 44 457899999999999999999999998753 221 2 222 211 01 111 2234433332 111
Q ss_pred cc---cceEEeccccccccccHHHHHHhh--ccCCCcccchhhHHHHHHHHHhcCCCeeeeccCC
Q 046508 328 TV---DKIVQVDFLSSSWFLSAELVKTLF--IETPFTFMTGEDLHLSYQLQKYRNAGSFVLPVDP 387 (932)
Q Consensus 328 ~~---~rl~~~d~l~~~wf~~re~l~~~f--~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp~~p 387 (932)
-. ......|..|+-..++|+.++.+. .|+.. + +. .+....|.++--+|+.-
T Consensus 145 l~~~~~g~~~~d~~~gfr~~~r~~~~~l~~~~~~~~-----~---~~-~l~~~~g~~i~evpv~~ 200 (325)
T PRK10714 145 LIQRTTGKAMGDYGCMLRAYRRHIVDAMLHCHERST-----F---IP-ILANTFARRAIEIPVHH 200 (325)
T ss_pred HHHHHcCCCCCCCCcCeEEEcHHHHHHHHHCCCCcc-----H---HH-HHHHHcCCCEEEEEeEe
Confidence 11 112234666666789999999884 33221 1 11 22334677777777743
No 52
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.10 E-value=5.2e-10 Score=120.59 Aligned_cols=193 Identities=21% Similarity=0.199 Sum_probs=118.9
Q ss_pred EEEEEcCCch------h-HHHHHHHHHcCCC-CCceEEEEeCCCCChhhHHHHHhhc-CC-CceEEEecCC---Ccc-cc
Q 046508 179 TVILNHFKRK------T-LCAQLDSLLQQTL-PFQHVWVLSFGSPNELSLKRIVNSY-ND-SRISFISSSY---DFK-YY 244 (932)
Q Consensus 179 taVVvTYNR~------~-L~e~L~aLl~QT~-~~~~IiVvdnaStD~t~t~~~l~~~-~~-~~i~~i~~~~---N~G-ga 244 (932)
|+|||.+||. . |+.||.+|..++. +-.+|||+||+|.+.+ .+.+.+. .. ..++|+.... .+| +.
T Consensus 1 SiIIPv~~~~~~~~i~~~l~~~l~~l~~~~~~~~~eiIvvd~~s~~~~--~~~l~~~~~~~~~~~~i~~~~~~~~f~~a~ 78 (281)
T PF10111_consen 1 SIIIPVRNRSERPDILERLRNCLESLSQFQSDPDFEIIVVDDGSSDEF--DEELKKLCEKNGFIRYIRHEDNGEPFSRAK 78 (281)
T ss_pred CEEEEecCCccchHHHHHHHHHHHHHHhcCCCCCEEEEEEECCCchhH--HHHHHHHHhccCceEEEEcCCCCCCcCHHH
Confidence 6899999996 2 7777888887544 4669999999999863 4455443 22 3343665443 356 55
Q ss_pred cchhhhhhcCCcEEEEEcCCCCCchhHHHHHHh-hccccccccccccccccccccCCCCCCCcccccccccccCc-CCCC
Q 046508 245 GRFQMALQTEADLVYIVDDDMIPGRKMLQILSH-VAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGL-YLPD 322 (932)
Q Consensus 245 GgF~~a~~~~~dyVwimDDD~IP~~~~Le~Ll~-~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~-~~p~ 322 (932)
+++.++.++.+|||.++|-||+|.|+.|+++++ .....+-.+.+++..+..++- +++-..+..... ... ..-.
T Consensus 79 arN~g~~~A~~d~l~flD~D~i~~~~~i~~~~~~~~~l~~~~~~~~~~p~~yl~~---~~~~~~~~~~~~--~~~~~~~~ 153 (281)
T PF10111_consen 79 ARNIGAKYARGDYLIFLDADCIPSPDFIEKLLNHVKKLDKNPNAFLVYPCLYLSE---EGSEKFYSQFKN--LWDHEFLE 153 (281)
T ss_pred HHHHHHHHcCCCEEEEEcCCeeeCHHHHHHHHHHHHHHhcCCCceEEEeeeeccc---hhhHHHhhcchh--cchHHHHH
Confidence 566666779999999999999999999999997 111111122233333433321 111111111000 000 0000
Q ss_pred CCCCccccceEEeccccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCe
Q 046508 323 PAYDITVDKIVQVDFLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGS 380 (932)
Q Consensus 323 ~~y~~~~~rl~~~d~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~ 380 (932)
...+.....+....+.+++.+++|+....+ |+|+=..| -+||..|++.|.+ +|...
T Consensus 154 ~~~~~~~~~~~~~~~~s~~~~i~r~~f~~iGGfDE~f~G~-G~ED~D~~~RL~~-~~~~~ 211 (281)
T PF10111_consen 154 SFISGKNSLWEFIAFASSCFLINREDFLEIGGFDERFRGW-GYEDIDFGYRLKK-AGYKF 211 (281)
T ss_pred HHhhccccccccccccceEEEEEHHHHHHhCCCCccccCC-CcchHHHHHHHHH-cCCcE
Confidence 001111223345677889999999999888 89975545 4789999999988 55443
No 53
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.04 E-value=3.5e-10 Score=118.85 Aligned_cols=172 Identities=19% Similarity=0.160 Sum_probs=103.8
Q ss_pred EEEEcCCch--hHHHHHHHHHcCCCC----------CceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCCcc--ccc
Q 046508 180 VILNHFKRK--TLCAQLDSLLQQTLP----------FQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYDFK--YYG 245 (932)
Q Consensus 180 aVVvTYNR~--~L~e~L~aLl~QT~~----------~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N~G--gaG 245 (932)
||||.||-. .|.++|++|++|++| ..+||||||||+| .|.| .+.
T Consensus 1 v~ip~yNE~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d----------------------~~~gk~~~~ 58 (244)
T cd04190 1 VCVTMYNEDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIK----------------------KNRGKRDSQ 58 (244)
T ss_pred CEEeeecCCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCccc----------------------ccCcchHHH
Confidence 689999994 499999999999998 5699999999998 1222 111
Q ss_pred c-----hhhhh-hcCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcC
Q 046508 246 R-----FQMAL-QTEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLY 319 (932)
Q Consensus 246 g-----F~~a~-~~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~ 319 (932)
+ .+.++ .+++|||.++|.|+++.+++|++++...-.+ +.+-+..|.+.|....+..+..+..+.-......
T Consensus 59 ~~~~~~~~~~~~~a~~e~i~~~DaD~~~~~~~l~~l~~~~~~~---p~vg~v~g~~~~~~~~~~~~~~~q~~ey~~~~~~ 135 (244)
T cd04190 59 LWFFNYFCRVLFPDDPEFILLVDADTKFDPDSIVQLYKAMDKD---PEIGGVCGEIHPMGKKQGPLVMYQVFEYAISHWL 135 (244)
T ss_pred HHHHHHHHHHhhcCCCCEEEEECCCCcCCHhHHHHHHHHHHhC---CCEEEEEeeeEEcCCcchhHHHhHheehhhhhhh
Confidence 1 12233 3689999999999999999999998654211 2344556777665432222221111000000000
Q ss_pred CCCCCCCccccceEEeccccccccccHHHHHHhhccCCC------------------cccchhhHHHHHHHHHhcCCCee
Q 046508 320 LPDPAYDITVDKIVQVDFLSSSWFLSAELVKTLFIETPF------------------TFMTGEDLHLSYQLQKYRNAGSF 381 (932)
Q Consensus 320 ~p~~~y~~~~~rl~~~d~l~~~wf~~re~l~~~f~E~~~------------------~~~t~eDlhLs~~~~ky~~i~~~ 381 (932)
.. .+. +.... .....|...++|++.++........ ...-+||+.|+..+.+ +|..+.
T Consensus 136 ~~--~~~-s~~g~-~~~~~G~~~~~R~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ED~~l~~~l~~-~G~~~~ 210 (244)
T cd04190 136 DK--AFE-SVFGF-VTCLPGCFSMYRIEALKGDNGGKGPLLDYAYLTNTVDSLHKKNNLDLGEDRILCTLLLK-AGPKRK 210 (244)
T ss_pred cc--cHH-HcCCc-eEECCCceEEEEehhhcCCccccccchhhccccCcccchHHHHHHhHhcccceeHHHhc-cCCccE
Confidence 00 000 00011 1235566778999988765322110 0124799999999988 777764
No 54
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=98.97 E-value=5.3e-09 Score=116.55 Aligned_cols=169 Identities=18% Similarity=0.133 Sum_probs=107.1
Q ss_pred EEEEEEcCCch-hHHHHHHHHHcC--CCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecC----CCcccc------
Q 046508 178 VTVILNHFKRK-TLCAQLDSLLQQ--TLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSS----YDFKYY------ 244 (932)
Q Consensus 178 VtaVVvTYNR~-~L~e~L~aLl~Q--T~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~----~N~Gga------ 244 (932)
+.|||.+|||+ +|++||++|++| +..+.+|+|.+||+.+++ .+++..+. .+|+++... .|.|..
T Consensus 2 ~PVlv~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~--~~~v~~~~-~~i~~i~~~~~~~~~~~~~~~~~~y 78 (334)
T cd02514 2 IPVLVIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEV--ADVAKSFG-DGVTHIQHPPISIKNVNPPHKFQGY 78 (334)
T ss_pred cCEEEEecCCHHHHHHHHHHHHhccccCCCceEEEEeCCCchHH--HHHHHhhc-cccEEEEcccccccccCcccccchh
Confidence 46899999998 599999999999 677899999999998864 78887774 346666532 333311
Q ss_pred ---------cchhhhhhcCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccc
Q 046508 245 ---------GRFQMALQTEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKE 315 (932)
Q Consensus 245 ---------GgF~~a~~~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~ 315 (932)
|........++++|.|+|||+++.|+.|+.+-++...-+..+.+.|.+|-. |. +++.
T Consensus 79 ~~ia~hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf~yf~~~l~~y~~D~~v~~ISa~N------dn---G~~~----- 144 (334)
T cd02514 79 YRIARHYKWALTQTFNLFGYSFVIILEDDLDIAPDFFSYFQATLPLLEEDPSLWCISAWN------DN---GKEH----- 144 (334)
T ss_pred hHHHHHHHHHHHHHHHhcCCCEEEEECCCCccCHhHHHHHHHHHHHHhcCCCEEEEEeec------cC---Cccc-----
Confidence 111111234799999999999999997765544432122225577777653 10 0000
Q ss_pred cCcCCCCCCCCccccceEEecccc-ccccccHHHHHHhhccCCCcccchhhHHHHHHHHH
Q 046508 316 AGLYLPDPAYDITVDKIVQVDFLS-SSWFLSAELVKTLFIETPFTFMTGEDLHLSYQLQK 374 (932)
Q Consensus 316 ~g~~~p~~~y~~~~~rl~~~d~l~-~~wf~~re~l~~~f~E~~~~~~t~eDlhLs~~~~k 374 (932)
.. +-+.+.+...||.. .+|.+.|+.-+.+ .++++.+ +-|..+....++
T Consensus 145 ----~~----~~~~~~lyrs~ff~glGWml~r~~W~e~-~~~wp~~--~WD~w~R~~~~r 193 (334)
T cd02514 145 ----FV----DDTPSLLYRTDFFPGLGWMLTRKLWKEL-EPKWPKA--FWDDWMRLPEQR 193 (334)
T ss_pred ----cc----CCCcceEEEecCCCchHHHHHHHHHHHh-CCCCCCC--ChHHhhcchhhh
Confidence 00 00133566767655 7899888877666 4454442 556666443333
No 55
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=98.92 E-value=5.2e-09 Score=112.20 Aligned_cols=197 Identities=11% Similarity=0.113 Sum_probs=120.0
Q ss_pred EEEEEEcCCch-h-HHHHHHHHHc----CCC-CCceEEEEeCCCCChhhHH------HHHhhc-CCCceEEEecCCCccc
Q 046508 178 VTVILNHFKRK-T-LCAQLDSLLQ----QTL-PFQHVWVLSFGSPNELSLK------RIVNSY-NDSRISFISSSYDFKY 243 (932)
Q Consensus 178 VtaVVvTYNR~-~-L~e~L~aLl~----QT~-~~~~IiVvdnaStD~t~t~------~~l~~~-~~~~i~~i~~~~N~Gg 243 (932)
|+++||+||=. . |.++|.+..+ |.+ +..+|+|+||+++++.... ++.+++ ...+++|++...|.|.
T Consensus 1 ~SIliP~~ne~~~~l~~~l~~~~~~~~~~~~~~~~eI~vldD~~d~~~~~~~~~~~~~l~~~~~~~~~v~~~~r~~~~g~ 80 (254)
T cd04191 1 TAIVMPVYNEDPARVFAGLRAMYESLAKTGLADHFDFFILSDTRDPDIWLAEEAAWLDLCEELGAQGRIYYRRRRENTGR 80 (254)
T ss_pred CEEEEeCCCCCHHHHHHHHHHHHHHHHhcCCcCceEEEEECCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCCCCc
Confidence 68999999996 3 8899888764 776 7899999999987653111 133344 3578999999999985
Q ss_pred -ccchhhhhh---cCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcC
Q 046508 244 -YGRFQMALQ---TEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLY 319 (932)
Q Consensus 244 -aGgF~~a~~---~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~ 319 (932)
+|.-+.++. +.+|||.+||-|++|.|++|++++.....+ +++-+..+....++ .+.-|...-.+... .+
T Consensus 81 Kag~l~~~~~~~~~~~~~i~~~DaD~~~~p~~l~~~v~~~~~~---~~vg~vq~~~~~~n-~~~~~~~~~~~~~~---~~ 153 (254)
T cd04191 81 KAGNIADFCRRWGSRYDYMVVLDADSLMSGDTIVRLVRRMEAN---PRAGIIQTAPKLIG-AETLFARLQQFANR---LY 153 (254)
T ss_pred cHHHHHHHHHHhCCCCCEEEEEeCCCCCCHHHHHHHHHHHHhC---CCEEEEeCCceeEC-CCCHHHHHHHHHHH---HH
Confidence 444344443 578999999999999999999998654212 22222233333232 22211110000000 00
Q ss_pred CCCCCCCccccc--eEEeccccccccccHHHHHHh--hcc--CCCcc---cchhhHHHHHHHHHhcCCCeeeec
Q 046508 320 LPDPAYDITVDK--IVQVDFLSSSWFLSAELVKTL--FIE--TPFTF---MTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 320 ~p~~~y~~~~~r--l~~~d~l~~~wf~~re~l~~~--f~E--~~~~~---~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
.|.. -..... --..-+.|++..+||+.|+.. +.+ .-..| .-.||++++..+++ +|..+...|
T Consensus 154 ~~~~--~~~~~~~~~~~~~~~G~~~~~Rr~al~~~~~~~~i~g~g~~~~~~l~eD~~l~~~~~~-~G~ri~~~~ 224 (254)
T cd04191 154 GPVF--GRGLAAWQGGEGNYWGHNAIIRVAAFMEHCALPVLPGRPPFGGHILSHDFVEAALMRR-AGWEVRLAP 224 (254)
T ss_pred HHHH--HHHHHHhcCCccCccceEEEEEHHHHHHhcCCccccCCCCCCCCeecHHHHHHHHHHH-cCCEEEEcc
Confidence 0100 000000 012346789999999988764 322 22233 45789999999998 788775443
No 56
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=98.74 E-value=8.1e-08 Score=112.46 Aligned_cols=192 Identities=10% Similarity=0.150 Sum_probs=115.7
Q ss_pred CCCcEEEEEEcCCchh-HHHHHHHHHc-CCCCCceEEEEeCCCCChhhHHHHHhhc--CCCceEEEecCCCccc--ccch
Q 046508 174 NRPKVTVILNHFKRKT-LCAQLDSLLQ-QTLPFQHVWVLSFGSPNELSLKRIVNSY--NDSRISFISSSYDFKY--YGRF 247 (932)
Q Consensus 174 ~~~~VtaVVvTYNR~~-L~e~L~aLl~-QT~~~~~IiVvdnaStD~t~t~~~l~~~--~~~~i~~i~~~~N~Gg--aGgF 247 (932)
..+.|++|||.||=.. +.++|++++. |.++..+|+|+||+|+|+| .+.+++. ..++++++..+.+-+. ++.-
T Consensus 64 ~~p~vaIlIPA~NE~~vI~~~l~s~L~~ldY~~~eIiVv~d~ndd~T--~~~v~~l~~~~p~v~~vv~~~~gp~~Ka~aL 141 (504)
T PRK14716 64 PEKRIAIFVPAWREADVIGRMLEHNLATLDYENYRIFVGTYPNDPAT--LREVDRLAARYPRVHLVIVPHDGPTSKADCL 141 (504)
T ss_pred CCCceEEEEeccCchhHHHHHHHHHHHcCCCCCeEEEEEECCCChhH--HHHHHHHHHHCCCeEEEEeCCCCCCCHHHHH
Confidence 5778999999999976 9999998764 5788889999999999985 7777764 3355665554333211 1111
Q ss_pred hhhh------h-c---CCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCc--ccc-ccccc
Q 046508 248 QMAL------Q-T---EADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFP--SYR-KFRSK 314 (932)
Q Consensus 248 ~~a~------~-~---~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~--~y~-~~~s~ 314 (932)
+.++ + . ++|+|.++|=|+++.|++|+.+..... + .+++ ...++++.....++. .|- .|...
T Consensus 142 N~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd~Lr~~~~~~~-~---~~~V--Q~pv~~~~~~~~~~~ag~y~~ef~~~ 215 (504)
T PRK14716 142 NWIYQAIFAFERERGIRFAIIVLHDAEDVIHPLELRLYNYLLP-R---HDFV--QLPVFSLPRDWGEWVAGTYMDEFAES 215 (504)
T ss_pred HHHHHHHHHhhhhcCCCcCEEEEEcCCCCcCccHHHHHHhhcC-C---CCEE--ecceeccCCchhHHHHHHHHHHHHHH
Confidence 1122 1 1 349999999999999999998754321 1 1121 122334422211110 010 00000
Q ss_pred ccCcCCCCCCCCccccceE-EeccccccccccHHHHHHh--------hccCCCcccchhhHHHHHHHHHhcCCCeeeecc
Q 046508 315 EAGLYLPDPAYDITVDKIV-QVDFLSSSWFLSAELVKTL--------FIETPFTFMTGEDLHLSYQLQKYRNAGSFVLPV 385 (932)
Q Consensus 315 ~~g~~~p~~~y~~~~~rl~-~~d~l~~~wf~~re~l~~~--------f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp~ 385 (932)
.... ++ .-..+- .+...|.+.++||+.|+.+ |.+.-. .||+.|+..+++ +|.++..+|.
T Consensus 216 ~~~~-l~------~r~~LG~~~~~~Gtg~afRR~aLe~l~~~~GG~~fd~~sL----TED~dLglRL~~-~G~rv~y~p~ 283 (504)
T PRK14716 216 HLKD-LP------VREALGGLIPSAGVGTAFSRRALERLAAERGGQPFDSDSL----TEDYDIGLRLKR-AGFRQIFVRV 283 (504)
T ss_pred HHHH-HH------HHHhcCCccccCCeeEEeEHHHHHHHHhhcCCCCCCCCCc----chHHHHHHHHHH-CCCEEEEecc
Confidence 0000 00 001111 1223477889999999987 544433 689999999999 8999877654
No 57
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=98.64 E-value=8.2e-08 Score=98.76 Aligned_cols=169 Identities=17% Similarity=0.208 Sum_probs=109.5
Q ss_pred CcEEEEEEcCCchh-HHHH---HHHHHcCCCCCceEEEEeCCCCChhhHHHHHhh----cCCCceEEEecCCCcccccch
Q 046508 176 PKVTVILNHFKRKT-LCAQ---LDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNS----YNDSRISFISSSYDFKYYGRF 247 (932)
Q Consensus 176 ~~VtaVVvTYNR~~-L~e~---L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~----~~~~~i~~i~~~~N~GgaGgF 247 (932)
.+-++|+||||-+. |+-+ +.....|.-..+|||||||+|+||| .+++++ |...+|....-...+|-.--+
T Consensus 3 ~kYsvilPtYnEk~Nlpi~~~li~~~~~e~~~~~eiIivDD~SpDGt--~~~a~~L~k~yg~d~i~l~pR~~klGLgtAy 80 (238)
T KOG2978|consen 3 IKYSVILPTYNEKENLPIITRLIAKYMSEEGKKYEIIIVDDASPDGT--QEVAKALQKIYGEDNILLKPRTKKLGLGTAY 80 (238)
T ss_pred cceeEEeccccCCCCCeeeHHHHHhhhhhhcCceEEEEEeCCCCCcc--HHHHHHHHHHhCCCcEEEEeccCcccchHHH
Confidence 46899999999974 5533 4455556667999999999999986 777776 667789999988889854445
Q ss_pred hhh-hhcCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcCCCCCCCC
Q 046508 248 QMA-LQTEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYD 326 (932)
Q Consensus 248 ~~a-~~~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~ 326 (932)
.-+ .+++++|+.+||-|---.|..+-++++.-.-.+| .-++|+. .-|=..-++ .+-+||.-|+-|.. +--
T Consensus 81 ~hgl~~a~g~fiviMDaDlsHhPk~ipe~i~lq~~~~~-div~GTR--Ya~~ggV~g-W~mkRk~IS~gAn~-la~---- 151 (238)
T KOG2978|consen 81 IHGLKHATGDFIVIMDADLSHHPKFIPEFIRLQKEGNY-DIVLGTR--YAGGGGVYG-WDMKRKIISRGANF-LAR---- 151 (238)
T ss_pred HhhhhhccCCeEEEEeCccCCCchhHHHHHHHhhccCc-ceeeeee--EcCCCceec-chhhHHHHhhhhHH-HHH----
Confidence 444 4489999999999998888888888765321111 2233321 001000111 22345554543222 110
Q ss_pred ccccceEEeccccccccccHHHHHHhhccC
Q 046508 327 ITVDKIVQVDFLSSSWFLSAELVKTLFIET 356 (932)
Q Consensus 327 ~~~~rl~~~d~l~~~wf~~re~l~~~f~E~ 356 (932)
..-+.--.|+-|+=-+.++++|+.+..|-
T Consensus 152 -~ll~~~~sdltGsFrLykk~vl~~li~e~ 180 (238)
T KOG2978|consen 152 -ILLNPGVSDLTGSFRLYKKEVLEKLIEES 180 (238)
T ss_pred -HhccCCCccCcceeeeehHHHHHhhHHHh
Confidence 11112335677777889999999998774
No 58
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=98.58 E-value=3.4e-07 Score=110.86 Aligned_cols=203 Identities=12% Similarity=0.133 Sum_probs=127.5
Q ss_pred CCCcEEEEEEcCCch------hHHHHHHHHHcCCCC-CceEEEEeCCCCChhhHH------HHHhhc-CCCceEEEecCC
Q 046508 174 NRPKVTVILNHFKRK------TLCAQLDSLLQQTLP-FQHVWVLSFGSPNELSLK------RIVNSY-NDSRISFISSSY 239 (932)
Q Consensus 174 ~~~~VtaVVvTYNR~------~L~e~L~aLl~QT~~-~~~IiVvdnaStD~t~t~------~~l~~~-~~~~i~~i~~~~ 239 (932)
..++|++|||+||-. .|++++++|.+|.++ ..+|+|+||++++++... ++.+++ ...+|.|.+-..
T Consensus 122 ~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~~~~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~~~~i~yr~R~~ 201 (691)
T PRK05454 122 PEARTAILMPIYNEDPARVFAGLRAMYESLAATGHGAHFDFFILSDTRDPDIAAAEEAAWLELRAELGGEGRIFYRRRRR 201 (691)
T ss_pred CCCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCCCCCEEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCcEEEEECCc
Confidence 677899999999985 289999999999875 579999999999875221 233344 245899998889
Q ss_pred Ccccccch-hhhhh---cCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccc
Q 046508 240 DFKYYGRF-QMALQ---TEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKE 315 (932)
Q Consensus 240 N~GgaGgF-~~a~~---~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~ 315 (932)
|.|.-.|+ +.++. .++||+.++|=|+++++++|.+++.....+. ++-...+...+++ .+.-|...-.|.++-
T Consensus 202 n~~~KaGNl~~~~~~~~~~~eyivvLDADs~m~~d~L~~lv~~m~~dP---~vGlVQt~~~~~n-~~slfaR~qqf~~~~ 277 (691)
T PRK05454 202 NVGRKAGNIADFCRRWGGAYDYMVVLDADSLMSGDTLVRLVRLMEANP---RAGLIQTLPVAVG-ADTLFARLQQFATRV 277 (691)
T ss_pred CCCccHHHHHHHHHhcCCCcCEEEEEcCCCCCCHHHHHHHHHHHhhCc---CEEEEeCCccCcC-CCCHHHHHHHHHHHH
Confidence 99865444 33444 4679999999999999999999986432121 1111123333332 333232211111100
Q ss_pred cCcCCCCCCCCccccceEEeccccccccccHHHHHHh-----hccC-CC-cccchhhHHHHHHHHHhcCCCeeeec
Q 046508 316 AGLYLPDPAYDITVDKIVQVDFLSSSWFLSAELVKTL-----FIET-PF-TFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 316 ~g~~~p~~~y~~~~~rl~~~d~l~~~wf~~re~l~~~-----f~E~-~~-~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
|-|-..-+.+--..-+.-|.||+-.+|++.+... ..++ |+ .-.-.||+.++..+++ +|..+..+|
T Consensus 278 ---y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~~glp~L~g~~p~~~~~LseD~~~a~~l~~-~GyrV~~~p 349 (691)
T PRK05454 278 ---YGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEHCGLPPLPGRGPFGGHILSHDFVEAALMRR-AGWGVWLAP 349 (691)
T ss_pred ---HHHHHHhhhhhhccCccccccceEEEEHHHHHHhcCCccccccCCCCCCcccHHHHHHHHHHH-CCCEEEEcC
Confidence 1110000001111235568899999999988754 1222 32 2344689999999999 888875443
No 59
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=98.21 E-value=6.7e-06 Score=100.33 Aligned_cols=192 Identities=10% Similarity=0.119 Sum_probs=111.5
Q ss_pred CCCcEEEEEEcCCchh-HHHHHHHHH-cCCCCCceEEEEeCCCCChhhHHHHHhhc--CCCceEEEecCC--Ccccccch
Q 046508 174 NRPKVTVILNHFKRKT-LCAQLDSLL-QQTLPFQHVWVLSFGSPNELSLKRIVNSY--NDSRISFISSSY--DFKYYGRF 247 (932)
Q Consensus 174 ~~~~VtaVVvTYNR~~-L~e~L~aLl-~QT~~~~~IiVvdnaStD~t~t~~~l~~~--~~~~i~~i~~~~--N~GgaGgF 247 (932)
..+.|+++||.||=.. +.+.+++++ +|.||-.+|+|++++++++ |.+++++. ..++++++.... |.|=++..
T Consensus 61 ~~~~vsIlVPa~nE~~vi~~~i~~ll~~ldYP~~eI~vi~~~nD~~--T~~~~~~l~~~~p~~~~v~~~~~g~~gKa~aL 138 (727)
T PRK11234 61 DEKPLAIMVPAWNETGVIGNMAELAATTLDYENYHIFVGTYPNDPA--TQADVDAVCARFPNVHKVVCARPGPTSKADCL 138 (727)
T ss_pred CCCCEEEEEecCcchhhHHHHHHHHHHhCCCCCeEEEEEecCCChh--HHHHHHHHHHHCCCcEEEEeCCCCCCCHHHHH
Confidence 5678999999999986 888899887 6899989999999877664 57888765 234455443333 55544444
Q ss_pred hhhhhc----------CCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCc------ccccc
Q 046508 248 QMALQT----------EADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFP------SYRKF 311 (932)
Q Consensus 248 ~~a~~~----------~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~------~y~~~ 311 (932)
+.+++. .++.+.|.|=|++|+|++|..+-... +.. +++ .+...|..+...++. .|-..
T Consensus 139 N~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~pd~L~~~~~l~--~~~--~~V--Q~p~~p~~~~~~~~~~~~~~~EFa~~ 212 (727)
T PRK11234 139 NNVLDAITQFERSANFAFAGFILHDAEDVISPMELRLFNYLV--ERK--DLI--QIPVYPFEREWTHFTSGTYIDEFAEL 212 (727)
T ss_pred HHHHHHHHhhhcccCCcccEEEEEcCCCCCChhHHHHHHhhc--CCC--CeE--eecccCCCccHHHHHHHHHHHHHHHH
Confidence 443321 35668889999999999998321111 111 111 223345543222211 12100
Q ss_pred cccccCcCCCCCCCCccccce-EEeccccccccccHHHHHHhhccC----CCcccchhhHHHHHHHHHhcCCCeeeec
Q 046508 312 RSKEAGLYLPDPAYDITVDKI-VQVDFLSSSWFLSAELVKTLFIET----PFTFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 312 ~s~~~g~~~p~~~y~~~~~rl-~~~d~l~~~wf~~re~l~~~f~E~----~~~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
. .++. +....+ -.+-..|.+..|+|..|+.+-.+- ..+-.-.||+.++..++. +|..+..+|
T Consensus 213 -~------~~~~---~~~~~lgg~~~l~G~~~af~Rr~l~al~~~ggg~~~~~~~lTED~dlg~rL~~-~G~~v~f~~ 279 (727)
T PRK11234 213 -H------GKDV---PVREALAGQVPSAGVGTCFSRRAVTALLEDGDGIAFDVQSLTEDYDIGFRLKE-KGMREIFVR 279 (727)
T ss_pred -h------hhhh---HHHHHcCCCcccCCceEEEecccHHHHHHhcCCCCcCCCcchHHHHHHHHHHH-CCCEEEEcc
Confidence 0 0100 011112 122344545666444444333332 233344689999999999 899987765
No 60
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=98.00 E-value=2.6e-05 Score=85.00 Aligned_cols=190 Identities=16% Similarity=0.081 Sum_probs=116.0
Q ss_pred CcEEEEEEcCCch-----hHHHHHHHHHcCCCC----CceEEEEeCCCCChhhHHHHHh----hcCCCceEEEecCCCcc
Q 046508 176 PKVTVILNHFKRK-----TLCAQLDSLLQQTLP----FQHVWVLSFGSPNELSLKRIVN----SYNDSRISFISSSYDFK 242 (932)
Q Consensus 176 ~~VtaVVvTYNR~-----~L~e~L~aLl~QT~~----~~~IiVvdnaStD~t~t~~~l~----~~~~~~i~~i~~~~N~G 242 (932)
...++|||.||-. .|.||++.|..--.. -++|+||||||+|+| .++.- ++.+.+|+++.+.+|.|
T Consensus 67 ~~lsVIVpaynE~~ri~~mldeav~~le~ry~~~~~F~~eiiVvddgs~d~T--~~~a~k~s~K~~~d~irV~~l~~nrg 144 (323)
T KOG2977|consen 67 MYLSVIVPAYNEEGRIGAMLDEAVDYLEKRYLSDKSFTYEIIVVDDGSTDST--VEVALKFSRKLGDDNIRVIKLKKNRG 144 (323)
T ss_pred ceeEEEEecCCcccchHHHHHHHHHHHHHHhccCCCCceeEEEeCCCCchhH--HHHHHHHHHHcCcceEEEeehhccCC
Confidence 3699999999974 399999998653322 569999999999975 66654 45778999999999998
Q ss_pred --cccchhhhhhcCCcEEEEEcCCC---CCchhHHHHHHhhcccccccc-ccccccccccccCC--C---CCCCcccccc
Q 046508 243 --YYGRFQMALQTEADLVYIVDDDM---IPGRKMLQILSHVAGTEKYKN-SVLGSIGRILPFRQ--K---DFTFPSYRKF 311 (932)
Q Consensus 243 --gaGgF~~a~~~~~dyVwimDDD~---IP~~~~Le~Ll~~~g~~~~~~-~vlgs~G~~vPf~~--~---d~~f~~y~~~ 311 (932)
||=| ..+....++++.+-|-|- .++-..|++.|...-.--.+. .+.||.-|+.=++. . +-+|--|+-|
T Consensus 145 KGgAvR-~g~l~~rG~~ilfadAdGaTkf~d~ekLe~al~~~~~p~~r~~va~GsrahLe~~~a~a~rs~~r~iLM~gFH 223 (323)
T KOG2977|consen 145 KGGAVR-KGMLSSRGQKILFADADGATKFADLEKLEKALNDKAGPGPRDDVACGSRAHLENTEAVAKRSVIRNILMYGFH 223 (323)
T ss_pred CCccee-hhhHhccCceEEEEcCCCCccCCCHHHHHHHHHhhcCCCCCCceeecCHHHhhccHHHHHHhHhhHHHHHHHH
Confidence 3334 344568999999999994 788888888876432101111 13444444421100 0 0011111100
Q ss_pred ccc--ccCcCCCCCCCCccccceEEeccccccccccHHHHHHhhcc-CCCcccchhhHHHHHHHHHhcCCCeeeecc
Q 046508 312 RSK--EAGLYLPDPAYDITVDKIVQVDFLSSSWFLSAELVKTLFIE-TPFTFMTGEDLHLSYQLQKYRNAGSFVLPV 385 (932)
Q Consensus 312 ~s~--~~g~~~p~~~y~~~~~rl~~~d~l~~~wf~~re~l~~~f~E-~~~~~~t~eDlhLs~~~~ky~~i~~~vlp~ 385 (932)
-.- -|.. .=-|==|+.-+|.|+.-+.+|.- |.--|. -|.+|=+-+ +..++|+--.|+
T Consensus 224 ~lv~~~a~r--------------sI~DTQcgfklftR~aa~~if~~lh~e~W~--fdvEll~La-~~~~ipi~ei~v 283 (323)
T KOG2977|consen 224 KLVWIFAIR--------------SIRDTQCGFKLFTRAAARRIFPWLHVERWA--FDVELLYLA-KRFTIPIKEIPV 283 (323)
T ss_pred HHHHHHhcC--------------cccccchhHHHhHHHHHHhhcchhheeeee--ccHHHHHHH-HHcCCCcEEeee
Confidence 000 0000 11244567778889888888733 322232 577774444 448888865555
No 61
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=97.99 E-value=6.9e-05 Score=91.14 Aligned_cols=191 Identities=14% Similarity=0.153 Sum_probs=116.4
Q ss_pred CCCcEEEEEEcCCchh-HHHHHHHHH-cCCCCCceEEEE---eCCCCChhhHHHHHhhc--CCCceEEEecCCC--cccc
Q 046508 174 NRPKVTVILNHFKRKT-LCAQLDSLL-QQTLPFQHVWVL---SFGSPNELSLKRIVNSY--NDSRISFISSSYD--FKYY 244 (932)
Q Consensus 174 ~~~~VtaVVvTYNR~~-L~e~L~aLl-~QT~~~~~IiVv---dnaStD~t~t~~~l~~~--~~~~i~~i~~~~N--~Gga 244 (932)
..+.|+++||.||=.. +.+++++++ ++.||..+|+|+ ||+.| .+.+++. ..++++.|..+.| .|=+
T Consensus 69 ~~~~vsIlVPa~nE~~VI~~~v~~ll~~ldYp~~~I~v~~~~nD~~T-----~~~~~~~~~~~p~~~~v~~~~~gp~gKa 143 (703)
T PRK15489 69 DEQPLAIMVPAWKEYDVIAKMIENMLATLDYRRYVIFVGTYPNDAET-----ITEVERMRRRYKRLVRVEVPHDGPTCKA 143 (703)
T ss_pred CCCceEEEEeCCCcHHHHHHHHHHHHhcCCCCCeEEEEEecCCCccH-----HHHHHHHhccCCcEEEEEcCCCCCCCHH
Confidence 3568999999999976 999999987 679999999994 56644 4555554 2256777776554 3312
Q ss_pred cchhhhh--------hcC--CcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcc------c
Q 046508 245 GRFQMAL--------QTE--ADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPS------Y 308 (932)
Q Consensus 245 GgF~~a~--------~~~--~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~------y 308 (932)
.-.+.++ ..+ .+.|.+.|=|++|.|+.|..+-+... +. . + ..|.+.+..+...++-+ |
T Consensus 144 ~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~~~P~~L~~~~~~~~-~~--~-~--iQ~pV~~~~~~~~~~l~~~~~~Ef 217 (703)
T PRK15489 144 DCLNWIIQAIFRYEAGHGIEFAGVILHDSEDVLHPLELKYFNYLLP-RK--D-L--VQLPVLSLERKWYEWVAGTYMDEF 217 (703)
T ss_pred HHHHHHHHHHHhhhhhccCccceEEEEcCCCCCChhHHHHHHhhcC-Cc--c-e--eeeeeccCCCccccHHHHHHHHHH
Confidence 2222221 123 34599999999999999987643321 11 1 1 12333333333322211 2
Q ss_pred ccccccccCcCCCCCCCCccccceEEeccccccccccHHHHHHhhccC-CCcccc---hhhHHHHHHHHHhcCCCeee--
Q 046508 309 RKFRSKEAGLYLPDPAYDITVDKIVQVDFLSSSWFLSAELVKTLFIET-PFTFMT---GEDLHLSYQLQKYRNAGSFV-- 382 (932)
Q Consensus 309 ~~~~s~~~g~~~p~~~y~~~~~rl~~~d~l~~~wf~~re~l~~~f~E~-~~~~~t---~eDlhLs~~~~ky~~i~~~v-- 382 (932)
-.+-.+ .+|.- ..+. ..+=+-|-+..|||+.|+.+..|. ...|.+ -||+.|+..+++ .|+++..
T Consensus 218 a~~~~~----~l~~r-~~l~----~~ipl~Gv~~~frr~aL~~l~~~gg~~~~n~~sLTED~Dlg~RL~~-~G~r~~f~~ 287 (703)
T PRK15489 218 AEWHQK----DLVVR-ESLT----GTVPSAGVGTCFSRRALLALMKERGNQPFNTSSLTEDYDFSFRLAE-LGMQEIFVR 287 (703)
T ss_pred HHHhhh----HHHHH-HHcC----CceeccCcceeeeHHHHHHHHHhcCCCCCCCCCchHhHHHHHHHHH-CCCceEEEE
Confidence 111010 01100 0000 112245568899999999998885 667877 789999999999 8888855
Q ss_pred ecc
Q 046508 383 LPV 385 (932)
Q Consensus 383 lp~ 385 (932)
.|+
T Consensus 288 ~~~ 290 (703)
T PRK15489 288 FPV 290 (703)
T ss_pred Eec
Confidence 366
No 62
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=97.97 E-value=2.3e-05 Score=82.66 Aligned_cols=176 Identities=15% Similarity=0.149 Sum_probs=96.1
Q ss_pred EEEEEEcCCchhHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCCcccccchhhhhh-cCCc
Q 046508 178 VTVILNHFKRKTLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYDFKYYGRFQMALQ-TEAD 256 (932)
Q Consensus 178 VtaVVvTYNR~~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N~GgaGgF~~a~~-~~~d 256 (932)
|++|+|.-|...+.+|+.+|.+|..|..++|-|+|-... .+.+.+++.|++ ++++
T Consensus 1 isiI~c~n~~~~~~~~~~~i~~~~~~~~~~i~i~~~~~~------------------------~s~~~~yN~a~~~a~~~ 56 (217)
T PF13712_consen 1 ISIIICVNDEELYEECLRSIKRLIGPPGELIEIDNVRNA------------------------KSMAAAYNEAMEKAKAK 56 (217)
T ss_dssp EEEEEEES-HHHHHHHHHHHHHTT--TEEEEEEE-SSS-------------------------S-TTTHHHHHGGG--SS
T ss_pred CEEEEEECCHHHHHHHHHHHHhhCCCCceEEEEeccCCC------------------------cCHHHHHHHHHHhCCCC
Confidence 566777555557999999999998888888777664332 235777777766 7899
Q ss_pred EEEEEcCCC-CCchhHHHHHHhhccccccccccccccccc-cccCCC---CCC----Cccccc----ccccccCcCCCCC
Q 046508 257 LVYIVDDDM-IPGRKMLQILSHVAGTEKYKNSVLGSIGRI-LPFRQK---DFT----FPSYRK----FRSKEAGLYLPDP 323 (932)
Q Consensus 257 yVwimDDD~-IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~-vPf~~~---d~~----f~~y~~----~~s~~~g~~~p~~ 323 (932)
|+.+|.||+ |..+++|+.+++....++-. +++|..|.. +|-.+. +.. ...|.+ ++...++. .
T Consensus 57 ylvflHqDv~i~~~~~l~~il~~~~~~~~~-G~iGvaG~~~~~~~~~~w~~~~~~g~~~~~~~~~~~~~~~~~~~----~ 131 (217)
T PF13712_consen 57 YLVFLHQDVFIINENWLEDILEIFEEDPNI-GMIGVAGSKRLPPNGVWWESPNKVGKVREYGRIMHGHGPNSAGE----V 131 (217)
T ss_dssp EEEEEETTEE-SSHHHHHHHHHHHHH-TTE-EEEESEEEESS-S-TTS---EEEEEETTEEEE----E------------
T ss_pred EEEEEeCCeEEcchhHHHHHHHHHhhCCCc-cEEEeecCCcCCCCCccccccccccccccccccccccccccccc----c
Confidence 999999997 77899999999876323333 377777766 443211 000 011211 00000011 0
Q ss_pred CC-CccccceEEeccccccccccHHHHHHhhccCCCcccchhhHHHHHHHHHhcCCCeeeec
Q 046508 324 AY-DITVDKIVQVDFLSSSWFLSAELVKTLFIETPFTFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 324 ~y-~~~~~rl~~~d~l~~~wf~~re~l~~~f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
.| +.......+++.+-+.+|+-|.-+- =|+|..++=--.||+-+|..+++ +|-++++.|
T Consensus 132 ~~~~~~~~~~~~V~avDg~ll~~~~dv~-~fde~~~~gfH~Ydvd~cl~~~~-~G~~v~~~~ 191 (217)
T PF13712_consen 132 RYGGPRNDPPEEVQAVDGLLLATQKDVP-RFDEDLFTGFHFYDVDQCLEARR-AGYRVVVPP 191 (217)
T ss_dssp -----ES-SSEEEEEE-TTEEEEETTB------SS--SSSSHHHHHHHHHHH-TT-EEEE--
T ss_pred cccccccCCceeEEEecceEEEEEcccC-CCCccccCCcchHHHHHHHHHHH-hCCEEEecC
Confidence 01 0011245888888888877554332 56776333223699999999999 898887643
No 63
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=97.73 E-value=0.0001 Score=69.49 Aligned_cols=108 Identities=22% Similarity=0.154 Sum_probs=76.2
Q ss_pred eEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhhcccC
Q 046508 600 SVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSESWYPA 679 (932)
Q Consensus 600 ~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEsf~P~ 679 (932)
.|+|-+||+++.|.|+|.||.+..+. ...|.|--|.+ ++++.++++.+.=....+++.++..|.|+..++-.++- .
T Consensus 1 Svvip~~n~~~~l~~~l~sl~~q~~~--~~eiivvdd~s-~d~~~~~~~~~~~~~~~i~~i~~~~n~g~~~~~n~~~~-~ 76 (169)
T PF00535_consen 1 SVVIPTYNEAEYLERTLESLLKQTDP--DFEIIVVDDGS-TDETEEILEEYAESDPNIRYIRNPENLGFSAARNRGIK-H 76 (169)
T ss_dssp EEEEEESS-TTTHHHHHHHHHHHSGC--EEEEEEEECS--SSSHHHHHHHHHCCSTTEEEEEHCCCSHHHHHHHHHHH-H
T ss_pred CEEEEeeCCHHHHHHHHHHHhhccCC--CEEEEEecccc-cccccccccccccccccccccccccccccccccccccc-c
Confidence 47889999999999999999999322 23566655555 44555566554213467899999999998665433322 2
Q ss_pred CCCceEEEEcCCcccChHHHHHHHHHHHHhcC
Q 046508 680 SDDDFGLLLEDDIEVSPYFYLWIKYALLAYHY 711 (932)
Q Consensus 680 ~~~s~vIVLEDDlevSP~Fy~Ylk~ALl~Y~y 711 (932)
...+|+++|+||.++.|.|+.-+...+.++..
T Consensus 77 a~~~~i~~ld~D~~~~~~~l~~l~~~~~~~~~ 108 (169)
T PF00535_consen 77 AKGEYILFLDDDDIISPDWLEELVEALEKNPP 108 (169)
T ss_dssp --SSEEEEEETTEEE-TTHHHHHHHHHHHCTT
T ss_pred cceeEEEEeCCCceEcHHHHHHHHHHHHhCCC
Confidence 24569999999999999999999998888643
No 64
>PF09258 Glyco_transf_64: Glycosyl transferase family 64 domain; InterPro: IPR015338 Members of this entry catalyse the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analogue of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0031227 intrinsic to endoplasmic reticulum membrane; PDB: 1ON6_B 1OMZ_B 1OMX_B 1ON8_B.
Probab=97.71 E-value=0.00019 Score=77.40 Aligned_cols=181 Identities=17% Similarity=0.194 Sum_probs=106.9
Q ss_pred EEEEEEc-CCchh-HHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCCcccccchhhhhhcCC
Q 046508 178 VTVILNH-FKRKT-LCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYDFKYYGRFQMALQTEA 255 (932)
Q Consensus 178 VtaVVvT-YNR~~-L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N~GgaGgF~~a~~~~~ 255 (932)
.||||.| |+|.. |+.-|..+. +.-.+.+|+||=|+...-. .....-+.. ..|+++....| .-..||...-+..+
T Consensus 1 fTvvi~t~~~R~~~L~~~l~~l~-~~~~l~~IvVvWn~~~~~P-~~~~~~~~~-vpV~~~~~~~n-sLnnRF~p~~~i~T 76 (247)
T PF09258_consen 1 FTVVINTSYKRSDLLKRLLRHLA-SSPSLRKIVVVWNNPNPPP-PSSKWPSTG-VPVRVVRSSRN-SLNNRFLPDPEIET 76 (247)
T ss_dssp EEEEEEE-SS-HHHHHHHHHHHT-TSTTEEEEEEEEE-TS--T-HHHHHT----S-EEEEEESSH-HGGGGGS--TT--S
T ss_pred CEEEEEecccchHHHHHHHHHHH-cCCCCCeEEEEeCCCCCCC-cccccCCCC-ceEEEEecCCc-cHHhcCcCccccCc
Confidence 4899999 99986 888898883 3334888888877733221 111111112 46778875544 35778888777889
Q ss_pred cEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcCCCCCCCCccccceEEe
Q 046508 256 DLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQV 335 (932)
Q Consensus 256 dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~~~~~rl~~~ 335 (932)
+-|..+|||.+-.++.|+-...+.- .+...++|..+|..-+... ..--.|.. .....|++
T Consensus 77 ~AVl~~DDDv~~~~~~l~faF~~W~--~~pdrlVGf~~R~h~~~~~-~~~~~Y~~---------~~~~~ySm-------- 136 (247)
T PF09258_consen 77 DAVLSLDDDVMLSCDELEFAFQVWR--EFPDRLVGFPPRSHSWDPS-SGRWKYTS---------EWSNEYSM-------- 136 (247)
T ss_dssp SEEEEEETTEEE-HHHHHHHHHHHC--CSTTSEEES-EEEEEEE-E-TTEEEEE----------SSS--BSE--------
T ss_pred ceEEEecCCcccCHHHHHHHHHHHH--hChhheeCCccceeecCCC-cccccccc---------CCCCcchh--------
Confidence 9999999999999999999988765 4445577776665322111 11111211 11222554
Q ss_pred ccccccccccHHHHHHhhccCCC-------cccchhhHHHHHHHHHhcCCCeeee
Q 046508 336 DFLSSSWFLSAELVKTLFIETPF-------TFMTGEDLHLSYQLQKYRNAGSFVL 383 (932)
Q Consensus 336 d~l~~~wf~~re~l~~~f~E~~~-------~~~t~eDlhLs~~~~ky~~i~~~vl 383 (932)
++++.-|++|+.+.++..+-|. .-.++||+.+...+...-|-|-+.+
T Consensus 137 -vLt~aaf~h~~yl~~Y~~~~p~~~r~~Vd~~~NCEDI~mNflvs~~T~~pPi~v 190 (247)
T PF09258_consen 137 -VLTGAAFYHRYYLELYTHWLPASIREYVDEHFNCEDIAMNFLVSNLTGKPPIKV 190 (247)
T ss_dssp -E-TTEEEEETHHHHHHHT-S-HHHHHHHHHHTS-HHHHHHHHHHHHHSS-SE--
T ss_pred -hhhhhHhhcchHHHHHhcCcHHHHHHHHhccCCHHHHHHHHHHHHhccCCCCcc
Confidence 5788899999999998744322 1368999999999988777776543
No 65
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=97.59 E-value=0.0006 Score=64.93 Aligned_cols=102 Identities=23% Similarity=0.195 Sum_probs=74.5
Q ss_pred EEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhhcccCC
Q 046508 601 VNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSESWYPAS 680 (932)
Q Consensus 601 IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEsf~P~~ 680 (932)
|+|.+|||++.|.|+|+||.+..+ ....|.|-.|.+.|+ +.+.+..+. + .+++.....+.|+..+. .......
T Consensus 1 vii~~~~~~~~l~~~l~sl~~~~~--~~~~iiivdd~s~~~-~~~~~~~~~-~--~~~~~~~~~~~g~~~a~-n~~~~~~ 73 (166)
T cd04186 1 IIIVNYNSLEYLKACLDSLLAQTY--PDFEVIVVDNASTDG-SVELLRELF-P--EVRLIRNGENLGFGAGN-NQGIREA 73 (166)
T ss_pred CEEEecCCHHHHHHHHHHHHhccC--CCeEEEEEECCCCch-HHHHHHHhC-C--CeEEEecCCCcChHHHh-hHHHhhC
Confidence 578899999999999999998776 234677766666554 455665552 2 67777777888886554 2222233
Q ss_pred CCceEEEEcCCcccChHHHHHHHHHHHHh
Q 046508 681 DDDFGLLLEDDIEVSPYFYLWIKYALLAY 709 (932)
Q Consensus 681 ~~s~vIVLEDDlevSP~Fy~Ylk~ALl~Y 709 (932)
..+++++++||..++|.++.-+...+...
T Consensus 74 ~~~~i~~~D~D~~~~~~~l~~~~~~~~~~ 102 (166)
T cd04186 74 KGDYVLLLNPDTVVEPGALLELLDAAEQD 102 (166)
T ss_pred CCCEEEEECCCcEECccHHHHHHHHHHhC
Confidence 67999999999999999998888775554
No 66
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=97.45 E-value=0.0013 Score=65.73 Aligned_cols=108 Identities=19% Similarity=0.193 Sum_probs=79.7
Q ss_pred CceeEEEEecCCc-hhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhh
Q 046508 597 MRISVNIVTQNRV-HSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSES 675 (932)
Q Consensus 597 ~~i~IvIfaynRp-~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEs 675 (932)
|.+.|+|.+||+. ..|.++|+||.+-.+.. ..+.|-=+.+.|..+..+++.+......+++.+...|.|..++.-.+
T Consensus 1 p~vsiii~~~n~~~~~l~~~l~sl~~q~~~~--~eiivvd~gs~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g 78 (202)
T cd04184 1 PLISIVMPVYNTPEKYLREAIESVRAQTYPN--WELCIADDASTDPEVKRVLKKYAAQDPRIKVVFREENGGISAATNSA 78 (202)
T ss_pred CeEEEEEecccCcHHHHHHHHHHHHhCcCCC--eEEEEEeCCCCChHHHHHHHHHHhcCCCEEEEEcccCCCHHHHHHHH
Confidence 4688999999999 99999999999876542 35666556667776777776654334467788888888986554222
Q ss_pred cccCCCCceEEEEcCCcccChHHHHHHHHHHH
Q 046508 676 WYPASDDDFGLLLEDDIEVSPYFYLWIKYALL 707 (932)
Q Consensus 676 f~P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl 707 (932)
+- ....+|+++|++|..+.|.++.-+..++.
T Consensus 79 ~~-~a~~d~i~~ld~D~~~~~~~l~~~~~~~~ 109 (202)
T cd04184 79 LE-LATGEFVALLDHDDELAPHALYEVVKALN 109 (202)
T ss_pred HH-hhcCCEEEEECCCCcCChHHHHHHHHHHH
Confidence 21 23568999999999999999988777663
No 67
>KOG1413 consensus N-acetylglucosaminyltransferase I [Carbohydrate transport and metabolism]
Probab=97.27 E-value=0.0021 Score=72.12 Aligned_cols=129 Identities=21% Similarity=0.398 Sum_probs=83.2
Q ss_pred ccCcCCCceeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcC-------CCCC---CcEEE
Q 046508 591 LPNWNRMRISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFD-------WPHG---PKTLR 660 (932)
Q Consensus 591 L~aWnk~~i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~-------WP~g---~vtlr 660 (932)
|.+|..| |||+||+-+|+++|+|+++.|-+-...+..-+++|.=|+. +.+|.+-+..|. -|.+ +++|-
T Consensus 62 ~~~~~~v-~pvvVf~csR~~~lr~~v~kll~yrPsaekfpiiVSQD~~-~e~vk~~~~~~g~~v~~i~~~~h~~~ei~v~ 139 (411)
T KOG1413|consen 62 LKNWPPV-IPVVVFACSRADALRRHVKKLLEYRPSAEKFPIIVSQDCE-KEAVKKKLLSYGSDVSHIQHPMHLKDEISVP 139 (411)
T ss_pred ccCCCCc-eeEEEEecCcHHHHHHHHHHHHHhCcchhhcCEEEeccCC-cHHHHHHHHHhccchhhhcCccccccccccC
Confidence 6777655 9999999999999999999999877333334688877764 444555554442 1211 11211
Q ss_pred --Eeccccch---hh----hhhhhcccCCCCceEEEEcCCcccChHHHHHHHHHHHHhcCCCCCCCCCeeeEEeeCC
Q 046508 661 --RRIIQGGL---IR----AVSESWYPASDDDFGLLLEDDIEVSPYFYLWIKYALLAYHYDPQISLPELSSISLYTP 728 (932)
Q Consensus 661 --~Ri~n~GL---ir----~VlEsf~P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl~Y~ys~~v~~~~L~GISLy~p 728 (932)
++--+ |. .| +.--.|. ...+++||+.|||++++|.||.|..-+.---+.++. |+.+|-.+-
T Consensus 140 ~~~~k~~-~Yy~IarHYkwAL~q~F~-~~~~s~vii~eDDl~iapDFF~YF~~t~~llk~D~s-----iwcvsaWND 209 (411)
T KOG1413|consen 140 PRHKKFN-AYYKIARHYKWALNQLFI-VFRESRVIITEDDLNIAPDFFSYFRNTIILLKGDPS-----IWCVSAWND 209 (411)
T ss_pred Ccccccc-hhHHHHHHHHHHHhhHHh-hcCCceeEEecchhhhhhHHHHHHHHHHHHHhcCCc-----eEEeeeecc
Confidence 12111 11 11 0111111 113688999999999999999999888776666655 599987654
No 68
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=97.25 E-value=0.0022 Score=66.55 Aligned_cols=112 Identities=13% Similarity=0.112 Sum_probs=81.8
Q ss_pred ccCcCCCceeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhh
Q 046508 591 LPNWNRMRISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIR 670 (932)
Q Consensus 591 L~aWnk~~i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir 670 (932)
......++|.|+|.+||+...|.++|+|+.+..|..+...+.|--|.+.| .+.+.++.+. ...+.+.....|.|...
T Consensus 23 ~~~~~~~~isVvip~~n~~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d-~t~~~~~~~~--~~~v~~i~~~~~~g~~~ 99 (251)
T cd06439 23 PDPAYLPTVTIIIPAYNEEAVIEAKLENLLALDYPRDRLEIIVVSDGSTD-GTAEIAREYA--DKGVKLLRFPERRGKAA 99 (251)
T ss_pred CCCCCCCEEEEEEecCCcHHHHHHHHHHHHhCcCCCCcEEEEEEECCCCc-cHHHHHHHHh--hCcEEEEEcCCCCChHH
Confidence 34556788999999999999999999999988876544567666666555 5666777663 12577777778888755
Q ss_pred hhhhhcccCCCCceEEEEcCCcccChHHHHHHHHHH
Q 046508 671 AVSESWYPASDDDFGLLLEDDIEVSPYFYLWIKYAL 706 (932)
Q Consensus 671 ~VlEsf~P~~~~s~vIVLEDDlevSP~Fy~Ylk~AL 706 (932)
+.-.++ .....++++++++|..+.|.++.=+...+
T Consensus 100 a~n~gi-~~a~~d~i~~lD~D~~~~~~~l~~l~~~~ 134 (251)
T cd06439 100 ALNRAL-ALATGEIVVFTDANALLDPDALRLLVRHF 134 (251)
T ss_pred HHHHHH-HHcCCCEEEEEccccCcCHHHHHHHHHHh
Confidence 543332 22345899999999999998887666554
No 69
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=97.15 E-value=0.0042 Score=58.25 Aligned_cols=98 Identities=16% Similarity=0.209 Sum_probs=68.1
Q ss_pred EEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCC-CCCcEEEEeccccchhhhhhhhcccC
Q 046508 601 VNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWP-HGPKTLRRRIIQGGLIRAVSESWYPA 679 (932)
Q Consensus 601 IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP-~g~vtlr~Ri~n~GLir~VlEsf~P~ 679 (932)
|+|-+||+++.|.++|+||.+..+ ....|.|--|.+.|. +.+.++.+.=. ...+.+.++..+.|+.++.-.++ -.
T Consensus 1 Viip~~n~~~~l~~~l~sl~~q~~--~~~~iivvdd~s~d~-t~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~n~~~-~~ 76 (180)
T cd06423 1 IIVPAYNEEAVIERTIESLLALDY--PKLEVIVVDDGSTDD-TLEILEELAALYIRRVLVVRDKENGGKAGALNAGL-RH 76 (180)
T ss_pred CeecccChHHHHHHHHHHHHhCCC--CceEEEEEeCCCccc-hHHHHHHHhccccceEEEEEecccCCchHHHHHHH-Hh
Confidence 567899999999999999998766 234677755655443 44455443111 13466777888889865542222 22
Q ss_pred CCCceEEEEcCCcccChHHHHHH
Q 046508 680 SDDDFGLLLEDDIEVSPYFYLWI 702 (932)
Q Consensus 680 ~~~s~vIVLEDDlevSP~Fy~Yl 702 (932)
...++++++++|..+.|.++.-|
T Consensus 77 ~~~~~i~~~D~D~~~~~~~l~~~ 99 (180)
T cd06423 77 AKGDIVVVLDADTILEPDALKRL 99 (180)
T ss_pred cCCCEEEEECCCCCcChHHHHHH
Confidence 36789999999999999988777
No 70
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=97.08 E-value=0.00061 Score=78.79 Aligned_cols=154 Identities=22% Similarity=0.306 Sum_probs=84.0
Q ss_pred CCCcEEEEEEcCCchh-HHHHHHHHHcCC-C-CCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecC---------C--
Q 046508 174 NRPKVTVILNHFKRKT-LCAQLDSLLQQT-L-PFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSS---------Y-- 239 (932)
Q Consensus 174 ~~~~VtaVVvTYNR~~-L~e~L~aLl~QT-~-~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~---------~-- 239 (932)
..+.+.++|.+|||+. |+.||++|++.. . ..+.|+|-.||+..+ +.+++++|.+ ++.++... .
T Consensus 91 ~~~~~pVlV~AcNRp~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~~--~~~vi~~y~~-~v~~i~~~~~~~i~~~~~~~ 167 (434)
T PF03071_consen 91 KEPVIPVLVFACNRPDYLRRTLDSLLKYRPSAEKFPIIVSQDGDDEE--VAEVIKSYGD-QVTYIQHPDFSPITIPPKEK 167 (434)
T ss_dssp ------EEEEESS-TT-HHHHHHHHHHH-S-TTTS-EEEEE-TT-HH--HHHHHHGGGG-GSEEEE-S--S-----TT-G
T ss_pred CCCcceEEEEecCCcHHHHHHHHHHHHcCCCCCCccEEEEecCCcHH--HHHHHHHhhh-hheeeecCCcCCceeCcccc
Confidence 4456888889999985 999999999853 2 355799999998775 5889988843 34444422 1
Q ss_pred Ccccccc----hhhh-----hhcCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCccccc
Q 046508 240 DFKYYGR----FQMA-----LQTEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRK 310 (932)
Q Consensus 240 N~GgaGg----F~~a-----~~~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~ 310 (932)
++.++.+ +-.| ...+++.|.|+.||.+..||.++.+..+...-+--++++|.++-- |.-+..+
T Consensus 168 ~~~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~~~~ll~~D~sl~ciSawN------dnG~~~~-- 239 (434)
T PF03071_consen 168 KFKGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSATLPLLENDPSLWCISAWN------DNGKEHF-- 239 (434)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHHHHHHHHH-TTEEEEES--------TT-BGGG--
T ss_pred cccchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHHHHHHHhcCCCeEEEEccc------cCCcccc--
Confidence 1111111 1112 123689999999999999999998876655434446788877653 2111111
Q ss_pred ccccccCcCCCCCCCCccccceEEec-cccccccccHHHHHH
Q 046508 311 FRSKEAGLYLPDPAYDITVDKIVQVD-FLSSSWFLSAELVKT 351 (932)
Q Consensus 311 ~~s~~~g~~~p~~~y~~~~~rl~~~d-~l~~~wf~~re~l~~ 351 (932)
.. +-....+--.| |+|=+|.++|++-+.
T Consensus 240 ---------~~----~~~~~~lyRsdffpglGWml~r~~w~e 268 (434)
T PF03071_consen 240 ---------VD----DSRPSLLYRSDFFPGLGWMLTRELWDE 268 (434)
T ss_dssp ---------S-----TT-TT-EEEESS---SSEEEEHHHHHH
T ss_pred ---------cc----CCCccceEecccCCchHHHhhHHHHHh
Confidence 00 11123445555 567789999997653
No 71
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=97.07 E-value=0.0038 Score=63.95 Aligned_cols=106 Identities=18% Similarity=0.119 Sum_probs=69.5
Q ss_pred ceeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhhcc
Q 046508 598 RISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSESWY 677 (932)
Q Consensus 598 ~i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEsf~ 677 (932)
++.|+|.+||+++.|.++|+||.+-.|.+....+.|--+.+. .++.+.++.+......+.+.+.. +.|...++-.++-
T Consensus 1 ~~sIiip~~n~~~~l~~~l~sl~~q~~~~~~~evivvd~~s~-d~~~~~~~~~~~~~~~v~~i~~~-~~~~~~a~N~g~~ 78 (249)
T cd02525 1 FVSIIIPVRNEEKYIEELLESLLNQSYPKDLIEIIVVDGGST-DGTREIVQEYAAKDPRIRLIDNP-KRIQSAGLNIGIR 78 (249)
T ss_pred CEEEEEEcCCchhhHHHHHHHHHhccCCCCccEEEEEeCCCC-ccHHHHHHHHHhcCCeEEEEeCC-CCCchHHHHHHHH
Confidence 478999999999999999999998877644445666544443 44556666554323346665543 4455333211111
Q ss_pred cCCCCceEEEEcCCcccChHHHHHHHHHH
Q 046508 678 PASDDDFGLLLEDDIEVSPYFYLWIKYAL 706 (932)
Q Consensus 678 P~~~~s~vIVLEDDlevSP~Fy~Ylk~AL 706 (932)
....+++++|+||..++|.++.-+...+
T Consensus 79 -~a~~d~v~~lD~D~~~~~~~l~~~~~~~ 106 (249)
T cd02525 79 -NSRGDIIIRVDAHAVYPKDYILELVEAL 106 (249)
T ss_pred -HhCCCEEEEECCCccCCHHHHHHHHHHH
Confidence 1246899999999999998877655433
No 72
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=97.06 E-value=0.0032 Score=63.66 Aligned_cols=105 Identities=21% Similarity=0.239 Sum_probs=69.9
Q ss_pred EEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHH-hcCCCCCCcEEEEec--cccchhhhhhhhcc
Q 046508 601 VNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVS-TFDWPHGPKTLRRRI--IQGGLIRAVSESWY 677 (932)
Q Consensus 601 IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~-~f~WP~g~vtlr~Ri--~n~GLir~VlEsf~ 677 (932)
|+|-+||+++.|.++|+||.+..|..+...|.|--|.+.| .+.++++ ....+...+.+.++. .+.|...++-.+..
T Consensus 1 viip~~n~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d-~t~~~~~~~~~~~~~~v~~~~~~~~~~~g~~~a~n~g~~ 79 (229)
T cd04192 1 VVIAARNEAENLPRLLQSLSALDYPKEKFEVILVDDHSTD-GTVQILEFAAAKPNFQLKILNNSRVSISGKKNALTTAIK 79 (229)
T ss_pred CEEEecCcHHHHHHHHHHHHhCCCCCCceEEEEEcCCCCc-ChHHHHHHHHhCCCcceEEeeccCcccchhHHHHHHHHH
Confidence 5788999999999999999998887644566665555544 3444444 222344455555554 46676544322221
Q ss_pred cCCCCceEEEEcCCcccChHHHHHHHHHHH
Q 046508 678 PASDDDFGLLLEDDIEVSPYFYLWIKYALL 707 (932)
Q Consensus 678 P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl 707 (932)
....++++++++|..+.|.++.-+..++.
T Consensus 80 -~~~~d~i~~~D~D~~~~~~~l~~l~~~~~ 108 (229)
T cd04192 80 -AAKGDWIVTTDADCVVPSNWLLTFVAFIQ 108 (229)
T ss_pred -HhcCCEEEEECCCcccCHHHHHHHHHHhh
Confidence 23568999999999999988766665543
No 73
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=97.00 E-value=0.0043 Score=71.75 Aligned_cols=110 Identities=15% Similarity=0.112 Sum_probs=78.3
Q ss_pred CCceeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhh
Q 046508 596 RMRISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSES 675 (932)
Q Consensus 596 k~~i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEs 675 (932)
.|.+.|+|-+||..+.+.++|+||.+.+|+.+..++.|--|.+.| ++.+.++.+.=.+..+.+++...++|..++.-.+
T Consensus 48 ~P~vsVIIP~yNe~~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD-~T~~il~~~~~~~~~v~v~~~~~~~Gka~AlN~g 126 (439)
T TIGR03111 48 LPDITIIIPVYNSEDTLFNCIESIYNQTYPIELIDIILANNQSTD-DSFQVFCRAQNEFPGLSLRYMNSDQGKAKALNAA 126 (439)
T ss_pred CCCEEEEEEeCCChHHHHHHHHHHHhcCCCCCCeEEEEEECCCCh-hHHHHHHHHHHhCCCeEEEEeCCCCCHHHHHHHH
Confidence 367899999999999999999999999998765566664444444 3444544332122356777666788876654233
Q ss_pred cccCCCCceEEEEcCCcccChHHHHHHHHHHH
Q 046508 676 WYPASDDDFGLLLEDDIEVSPYFYLWIKYALL 707 (932)
Q Consensus 676 f~P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl 707 (932)
.- ....++++++++|..+.|.++.-+..++.
T Consensus 127 l~-~s~g~~v~~~DaD~~~~~d~L~~l~~~f~ 157 (439)
T TIGR03111 127 IY-NSIGKYIIHIDSDGKLHKDAIKNMVTRFE 157 (439)
T ss_pred HH-HccCCEEEEECCCCCcChHHHHHHHHHHH
Confidence 22 33578999999999999999877776654
No 74
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=97.00 E-value=0.0033 Score=61.75 Aligned_cols=105 Identities=19% Similarity=0.128 Sum_probs=72.4
Q ss_pred EEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhhcccCC
Q 046508 601 VNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSESWYPAS 680 (932)
Q Consensus 601 IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEsf~P~~ 680 (932)
|+|.+||++..|.++|.||.+..+......+.|--+.+.| .+.+.++.+.-....+++.+...|.|...+.-.++- ..
T Consensus 1 iii~~~n~~~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d-~~~~~~~~~~~~~~~~~~~~~~~n~G~~~a~n~g~~-~a 78 (185)
T cd04179 1 VVIPAYNEEENIPELVERLLAVLEEGYDYEIIVVDDGSTD-GTAEIARELAARVPRVRVIRLSRNFGKGAAVRAGFK-AA 78 (185)
T ss_pred CeecccChHhhHHHHHHHHHHHhccCCCEEEEEEcCCCCC-ChHHHHHHHHHhCCCeEEEEccCCCCccHHHHHHHH-Hh
Confidence 5788999999999999999999874333456665555544 345555544322335577777888887555433322 22
Q ss_pred CCceEEEEcCCcccChHHHHHHHHHHH
Q 046508 681 DDDFGLLLEDDIEVSPYFYLWIKYALL 707 (932)
Q Consensus 681 ~~s~vIVLEDDlevSP~Fy~Ylk~ALl 707 (932)
..+|+++|++|..++|.++.-+..++.
T Consensus 79 ~gd~i~~lD~D~~~~~~~l~~l~~~~~ 105 (185)
T cd04179 79 RGDIVVTMDADLQHPPEDIPKLLEKLL 105 (185)
T ss_pred cCCEEEEEeCCCCCCHHHHHHHHHHHh
Confidence 448999999999999998876666544
No 75
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=96.97 E-value=0.0014 Score=67.05 Aligned_cols=105 Identities=29% Similarity=0.325 Sum_probs=62.0
Q ss_pred CceeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCC---HHHHHHHHhcCCCCCCcEEEEeccccc---hhh
Q 046508 597 MRISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVD---EATIKLVSTFDWPHGPKTLRRRIIQGG---LIR 670 (932)
Q Consensus 597 ~~i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D---~~~~~~l~~f~WP~g~vtlr~Ri~n~G---Lir 670 (932)
|+|.|+|-+||+++.|.++|+||.+.+| ...++.|-.+...+ +.++++... +|...+++.++..+.| ..+
T Consensus 1 P~v~Vvip~~~~~~~l~~~l~sl~~~~~--~~~~v~vvd~~~~~~~~~~~~~~~~~--~~~~~v~vi~~~~~~g~~~k~~ 76 (228)
T PF13641_consen 1 PRVSVVIPAYNEDDVLRRCLESLLAQDY--PRLEVVVVDDGSDDETAEILRALAAR--YPRVRVRVIRRPRNPGPGGKAR 76 (228)
T ss_dssp --EEEE--BSS-HHHHHHHHHHHTTSHH--HTEEEEEEEE-SSS-GCTTHHHHHHT--TGG-GEEEEE----HHHHHHHH
T ss_pred CEEEEEEEecCCHHHHHHHHHHHHcCCC--CCeEEEEEECCCChHHHHHHHHHHHH--cCCCceEEeecCCCCCcchHHH
Confidence 5789999999999999999999999887 34556664444433 234445554 4533567766655444 333
Q ss_pred hhhhhcccCCCCceEEEEcCCcccChHHHHHHHHHH
Q 046508 671 AVSESWYPASDDDFGLLLEDDIEVSPYFYLWIKYAL 706 (932)
Q Consensus 671 ~VlEsf~P~~~~s~vIVLEDDlevSP~Fy~Ylk~AL 706 (932)
++-+++- ....+++++|+||..+.|.|+.-+..++
T Consensus 77 a~n~~~~-~~~~d~i~~lD~D~~~~p~~l~~~~~~~ 111 (228)
T PF13641_consen 77 ALNEALA-AARGDYILFLDDDTVLDPDWLERLLAAF 111 (228)
T ss_dssp HHHHHHH-H---SEEEEE-SSEEE-CHHHHHHHHHH
T ss_pred HHHHHHH-hcCCCEEEEECCCcEECHHHHHHHHHHH
Confidence 3322221 2247899999999999999998888777
No 76
>PRK11204 N-glycosyltransferase; Provisional
Probab=96.96 E-value=0.0043 Score=70.41 Aligned_cols=108 Identities=12% Similarity=0.096 Sum_probs=77.3
Q ss_pred CCceeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhh
Q 046508 596 RMRISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSES 675 (932)
Q Consensus 596 k~~i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEs 675 (932)
.+.+.|+|-+||..+.+.++|+||.+.+|+ ..++.|--|.+.| ++.+.++.+.=.+.++++.++..|.|...++-.+
T Consensus 53 ~p~vsViIp~yne~~~i~~~l~sl~~q~yp--~~eiiVvdD~s~d-~t~~~l~~~~~~~~~v~~i~~~~n~Gka~aln~g 129 (420)
T PRK11204 53 YPGVSILVPCYNEGENVEETISHLLALRYP--NYEVIAINDGSSD-NTGEILDRLAAQIPRLRVIHLAENQGKANALNTG 129 (420)
T ss_pred CCCEEEEEecCCCHHHHHHHHHHHHhCCCC--CeEEEEEECCCCc-cHHHHHHHHHHhCCcEEEEEcCCCCCHHHHHHHH
Confidence 467999999999999999999999998887 3456665555544 3445554442122357777777888875543222
Q ss_pred cccCCCCceEEEEcCCcccChHHHHHHHHHHH
Q 046508 676 WYPASDDDFGLLLEDDIEVSPYFYLWIKYALL 707 (932)
Q Consensus 676 f~P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl 707 (932)
......++++++++|..+.|.++..+...+.
T Consensus 130 -~~~a~~d~i~~lDaD~~~~~d~L~~l~~~~~ 160 (420)
T PRK11204 130 -AAAARSEYLVCIDGDALLDPDAAAYMVEHFL 160 (420)
T ss_pred -HHHcCCCEEEEECCCCCCChhHHHHHHHHHH
Confidence 1233579999999999999999888777664
No 77
>PF05060 MGAT2: N-acetylglucosaminyltransferase II (MGAT2); InterPro: IPR007754 N-acetylglucosaminyltransferase II (2.4.1.143 from EC) is a Golgi resident enzyme that catalyzes an essential step in the biosynthetic pathway leading from high mannose to complex N-linked oligosaccharides []. Mutations in the MGAT2 gene lead to a congenital disorder of glycosylation (CDG IIa). CDG IIa patients have an increased bleeding tendency, unrelated to coagulation factors []. Synonym(s): UDP-N-acetyl-D-glucosamine:alpha-6-D-mannoside beta-1,2-N- acetylglucosaminyltransferase II, GnT II/MGAT2.; GO: 0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0009312 oligosaccharide biosynthetic process, 0005795 Golgi stack, 0016021 integral to membrane
Probab=96.95 E-value=0.0067 Score=68.81 Aligned_cols=210 Identities=20% Similarity=0.243 Sum_probs=121.0
Q ss_pred CCceeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcE-----------------
Q 046508 596 RMRISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKT----------------- 658 (932)
Q Consensus 596 k~~i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vt----------------- 658 (932)
+..+-|+|.|+|||.-|+.|+.||++|...+. -|-|+.----++++-+++++++. .++.
T Consensus 30 ~~~~vivvqVH~r~~yl~~li~sL~~~~~I~~--~llifSHd~~~~ein~~v~~I~F--c~v~QIf~P~S~ql~p~~FPG 105 (356)
T PF05060_consen 30 NDSIVIVVQVHNRPEYLKLLIDSLSQARGIEE--ALLIFSHDFYSEEINDLVQSIDF--CRVMQIFYPYSIQLYPNEFPG 105 (356)
T ss_pred CCCEEEEEEECCcHHHHHHHHHHHHHhhCccc--eEEEEeccCChHHHHHHHHhCCc--ceeEEEecccchhhCCCCCCC
Confidence 47788889999999999999999999976543 24444433357777788877653 2210
Q ss_pred -----E------------------------EEeccccch--------hhhhhhhcccCCCC-ceEEEEcCCcccChHHHH
Q 046508 659 -----L------------------------RRRIIQGGL--------IRAVSESWYPASDD-DFGLLLEDDIEVSPYFYL 700 (932)
Q Consensus 659 -----l------------------------r~Ri~n~GL--------ir~VlEsf~P~~~~-s~vIVLEDDlevSP~Fy~ 700 (932)
- ++|+.+--. +..|-|.+-....+ ++||+||+|-.|+|.||+
T Consensus 106 ~dP~DCpr~i~k~~a~~~~C~na~~pD~yGhyRea~~tq~KHHWWWk~n~Vf~~l~~~~~~~g~v~fLEEDhyv~pD~l~ 185 (356)
T PF05060_consen 106 QDPNDCPRDIKKEDALKLGCNNAEYPDSYGHYREAKFTQIKHHWWWKLNFVFDGLEETRNHNGWVLFLEEDHYVAPDFLH 185 (356)
T ss_pred CCcccccccccHhHHHhccCCCCCCccccCCcccccchhhhHHHHHHHHHHHHhhhhhccCCceEEEEecccccchhHHH
Confidence 1 122222111 33455655444444 789999999999999999
Q ss_pred HHHHHHHHhcC-CCCCCCCCeeeEEeeCCcchhhcccCCCCcccccccCCCCCCCeeeccCCCccccccchhhHhHHhHh
Q 046508 701 WIKYALLAYHY-DPQISLPELSSISLYTPRIVEVVKERPKWNATEFFKHIHPNTPYLHQLPCSWGAVFFPKQWREFYVYM 779 (932)
Q Consensus 701 Ylk~ALl~Y~y-s~~v~~~~L~GISLy~p~~~e~~~~rp~~~~t~~~~~~~~~~~FL~Q~P~SWG~l~f~d~W~eFh~yl 779 (932)
-++.....-.. -+.. .+.+...|...... ....+ .....++..- ..+=|.++=.+.|..++.--
T Consensus 186 ~l~~~~~~~~~~cp~c---~~~sLG~y~~~~~~----~~~~~-------~v~~~~W~Ss-kHNmGmAfNRs~W~kI~~ca 250 (356)
T PF05060_consen 186 VLRLMIKLKKSECPDC---DILSLGTYDKSNGY----QSDPN-------KVEVTPWISS-KHNMGMAFNRSTWNKIKSCA 250 (356)
T ss_pred HHHHHHHHhhhcCCCC---CEEeccCCcccccc----ccccc-------eeeeeccccc-cccceeEecHHHHHHHHHHH
Confidence 98887665532 2322 34555555431100 00000 0111233322 35779999999999999854
Q ss_pred hhcccccccCCCCccCCcccccchhhHH-HHHHHHHHHhCcEEeccCCCCCCcceeec-cCCCCCc
Q 046508 780 HMRFTEDAKANPVQIPKSRTNGWQASWK-KFLIDMMYLRGYVSLYPNFPNQASFSTNH-MEPGAHI 843 (932)
Q Consensus 780 s~rl~~~~~~~p~~ip~~~sn~W~~SW~-kyllel~~lRGY~~LYPnf~~~~SlsTnH-~E~G~h~ 843 (932)
++ |=. ... --| .|. -++..-|......+|+|..|- ..| .|=|-|-
T Consensus 251 ~~-FC~--------yDD---YNW--DwSL~~ls~~cl~~~~kvL~~~~PR-----V~HiGdCGlH~ 297 (356)
T PF05060_consen 251 DE-FCT--------YDD---YNW--DWSLQHLSQRCLPSPLKVLVPKGPR-----VFHIGDCGLHH 297 (356)
T ss_pred HH-hCC--------CCC---CCc--hHHHHHHHhhccCCccEEEEEccCc-----EEEcccccccc
Confidence 32 110 000 112 222 233333445667888887553 233 5567774
No 78
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=96.91 E-value=0.0078 Score=61.36 Aligned_cols=106 Identities=16% Similarity=0.072 Sum_probs=73.8
Q ss_pred CceeEEEEecCCc-hhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccch-hhh---
Q 046508 597 MRISVNIVTQNRV-HSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGL-IRA--- 671 (932)
Q Consensus 597 ~~i~IvIfaynRp-~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GL-ir~--- 671 (932)
|.|.|+|-+||+. +-|+++|+||.+..|..+...|.|--|. .+..+.++++++.= .-++.+..+..+.|- ..+
T Consensus 1 p~vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~-s~d~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~n~ 78 (234)
T cd06421 1 PTVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDG-RRPELRALAAELGV-EYGYRYLTRPDNRHAKAGNLNN 78 (234)
T ss_pred CceEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCC-CchhHHHHHHHhhc-ccCceEEEeCCCCCCcHHHHHH
Confidence 4688999999985 6799999999998886543456664444 45678888887741 123445555545443 211
Q ss_pred hhhhcccCCCCceEEEEcCCcccChHHHHHHHHHHHH
Q 046508 672 VSESWYPASDDDFGLLLEDDIEVSPYFYLWIKYALLA 708 (932)
Q Consensus 672 VlEsf~P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl~ 708 (932)
-++. ...+++++|++|..+.|.++.-+...+..
T Consensus 79 ~~~~----a~~d~i~~lD~D~~~~~~~l~~l~~~~~~ 111 (234)
T cd06421 79 ALAH----TTGDFVAILDADHVPTPDFLRRTLGYFLD 111 (234)
T ss_pred HHHh----CCCCEEEEEccccCcCccHHHHHHHHHhc
Confidence 1232 25799999999999999998888877754
No 79
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=96.88 E-value=0.008 Score=62.80 Aligned_cols=109 Identities=13% Similarity=0.111 Sum_probs=72.5
Q ss_pred CceeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCC-CCcEEEEeccccchhhhhhhh
Q 046508 597 MRISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPH-GPKTLRRRIIQGGLIRAVSES 675 (932)
Q Consensus 597 ~~i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~-g~vtlr~Ri~n~GLir~VlEs 675 (932)
|.+.|+|-+||..+.|.++|+||.+.+|......+.|-.|.+ +..+.++++.+.=+. .++.+..+..+.|...++=.+
T Consensus 1 p~vsIiIp~~Ne~~~l~~~l~sl~~~~y~~~~~eiivVdd~s-~d~t~~i~~~~~~~~~~~i~~~~~~~~~G~~~a~n~g 79 (241)
T cd06427 1 PVYTILVPLYKEAEVLPQLIASLSALDYPRSKLDVKLLLEED-DEETIAAARALRLPSIFRVVVVPPSQPRTKPKACNYA 79 (241)
T ss_pred CeEEEEEecCCcHHHHHHHHHHHHhCcCCcccEEEEEEECCC-CchHHHHHHHhccCCCeeEEEecCCCCCchHHHHHHH
Confidence 468899999999999999999999988865444555544554 446777887763221 122222333445554332122
Q ss_pred cccCCCCceEEEEcCCcccChHHHHHHHHHHH
Q 046508 676 WYPASDDDFGLLLEDDIEVSPYFYLWIKYALL 707 (932)
Q Consensus 676 f~P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl 707 (932)
+ -....+|++.+++|..+.|.|+.=+...+.
T Consensus 80 ~-~~a~gd~i~~~DaD~~~~~~~l~~~~~~~~ 110 (241)
T cd06427 80 L-AFARGEYVVIYDAEDAPDPDQLKKAVAAFA 110 (241)
T ss_pred H-HhcCCCEEEEEcCCCCCChHHHHHHHHHHH
Confidence 1 123568999999999999999876555554
No 80
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=96.87 E-value=0.005 Score=62.47 Aligned_cols=104 Identities=23% Similarity=0.210 Sum_probs=72.1
Q ss_pred EEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhhcccCC
Q 046508 601 VNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSESWYPAS 680 (932)
Q Consensus 601 IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEsf~P~~ 680 (932)
|+|-+||++..|.++|+||.+..+ .....+.|-=|.+.| .+.++++.+.=.+..+.+.++..|.|...+.-.++- ..
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~-~~~~eiiiVDd~S~d-~t~~~~~~~~~~~~~i~~~~~~~n~G~~~a~n~g~~-~a 77 (224)
T cd06442 1 IIIPTYNERENIPELIERLDAALK-GIDYEIIVVDDNSPD-GTAEIVRELAKEYPRVRLIVRPGKRGLGSAYIEGFK-AA 77 (224)
T ss_pred CeEeccchhhhHHHHHHHHHHhhc-CCCeEEEEEeCCCCC-ChHHHHHHHHHhCCceEEEecCCCCChHHHHHHHHH-Hc
Confidence 567899999999999999998876 223455664455544 334455544222345678888899998665433332 22
Q ss_pred CCceEEEEcCCcccChHHHHHHHHHHH
Q 046508 681 DDDFGLLLEDDIEVSPYFYLWIKYALL 707 (932)
Q Consensus 681 ~~s~vIVLEDDlevSP~Fy~Ylk~ALl 707 (932)
..+|+++|++|.++.|.++.-+-..+.
T Consensus 78 ~gd~i~~lD~D~~~~~~~l~~l~~~~~ 104 (224)
T cd06442 78 RGDVIVVMDADLSHPPEYIPELLEAQL 104 (224)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHh
Confidence 458999999999999999887766653
No 81
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=96.87 E-value=0.01 Score=60.00 Aligned_cols=106 Identities=18% Similarity=0.199 Sum_probs=69.8
Q ss_pred CceeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhc--CCCCCCcEEEEeccccch---hhh
Q 046508 597 MRISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTF--DWPHGPKTLRRRIIQGGL---IRA 671 (932)
Q Consensus 597 ~~i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f--~WP~g~vtlr~Ri~n~GL---ir~ 671 (932)
|.+.|+|-+||....|.++|+||.+..|.. ..+.|--|.+.|. +.+.++.+ ..|...+++...-.+.|. ..+
T Consensus 1 p~vsviip~~n~~~~l~~~L~sl~~q~~~~--~eiivVdd~s~d~-t~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 77 (196)
T cd02520 1 PGVSILKPLCGVDPNLYENLESFFQQDYPK--YEILFCVQDEDDP-AIPVVRKLIAKYPNVDARLLIGGEKVGINPKVNN 77 (196)
T ss_pred CCeEEEEecCCCCccHHHHHHHHHhccCCC--eEEEEEeCCCcch-HHHHHHHHHHHCCCCcEEEEecCCcCCCCHhHHH
Confidence 468899999999999999999999888753 4566655665553 33444333 124445555544445443 122
Q ss_pred hhhhcccCCCCceEEEEcCCcccChHHHHHHHHHH
Q 046508 672 VSESWYPASDDDFGLLLEDDIEVSPYFYLWIKYAL 706 (932)
Q Consensus 672 VlEsf~P~~~~s~vIVLEDDlevSP~Fy~Ylk~AL 706 (932)
+-.++ .....++++++++|..++|.++..+..++
T Consensus 78 ~n~g~-~~a~~d~i~~~D~D~~~~~~~l~~l~~~~ 111 (196)
T cd02520 78 LIKGY-EEARYDILVISDSDISVPPDYLRRMVAPL 111 (196)
T ss_pred HHHHH-HhCCCCEEEEECCCceEChhHHHHHHHHh
Confidence 21121 12357899999999999999998877664
No 82
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=96.81 E-value=0.0084 Score=59.99 Aligned_cols=104 Identities=21% Similarity=0.175 Sum_probs=74.2
Q ss_pred eEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcC--CCCCCcEEEEeccccchhhhhhhhcc
Q 046508 600 SVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFD--WPHGPKTLRRRIIQGGLIRAVSESWY 677 (932)
Q Consensus 600 ~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~--WP~g~vtlr~Ri~n~GLir~VlEsf~ 677 (932)
.|+|-+||+...|.++|.||.+..|. ...+.|--|.+.| ++.+.++.+. .| ..+++.+...|.|..+++-.+..
T Consensus 1 sIvIp~yn~~~~l~~~l~sl~~q~~~--~~eiiVvddgS~d-~t~~~~~~~~~~~~-~~~~~~~~~~~~G~~~~~n~g~~ 76 (214)
T cd04196 1 AVLMATYNGEKYLREQLDSILAQTYK--NDELIISDDGSTD-GTVEIIKEYIDKDP-FIIILIRNGKNLGVARNFESLLQ 76 (214)
T ss_pred CEEEEecCcHHHHHHHHHHHHhCcCC--CeEEEEEeCCCCC-CcHHHHHHHHhcCC-ceEEEEeCCCCccHHHHHHHHHH
Confidence 37889999999999999999998765 3456665555555 3445555442 23 35667777788898666433322
Q ss_pred cCCCCceEEEEcCCcccChHHHHHHHHHHHH
Q 046508 678 PASDDDFGLLLEDDIEVSPYFYLWIKYALLA 708 (932)
Q Consensus 678 P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl~ 708 (932)
....+|+++|++|..+.|.++.-+...+..
T Consensus 77 -~~~g~~v~~ld~Dd~~~~~~l~~~~~~~~~ 106 (214)
T cd04196 77 -AADGDYVFFCDQDDIWLPDKLERLLKAFLK 106 (214)
T ss_pred -hCCCCEEEEECCCcccChhHHHHHHHHHhc
Confidence 335799999999999999998887776543
No 83
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=96.80 E-value=0.011 Score=62.10 Aligned_cols=111 Identities=18% Similarity=0.158 Sum_probs=77.9
Q ss_pred CCceeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcC--CCCCCcEEEEeccccchhhhhh
Q 046508 596 RMRISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFD--WPHGPKTLRRRIIQGGLIRAVS 673 (932)
Q Consensus 596 k~~i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~--WP~g~vtlr~Ri~n~GLir~Vl 673 (932)
.+++.|+|-+||....+..+|.+|.+....-....+.|--|.+.| .+.++++.+. .|...+.+..+..|.|...+.-
T Consensus 8 ~~~vsVvIp~yne~~~l~~~l~~l~~~~~~~~~~eiivvDdgS~D-~t~~i~~~~~~~~~~~~v~~~~~~~n~G~~~a~n 86 (243)
T PLN02726 8 AMKYSIIVPTYNERLNIALIVYLIFKALQDVKDFEIIVVDDGSPD-GTQDVVKQLQKVYGEDRILLRPRPGKLGLGTAYI 86 (243)
T ss_pred CceEEEEEccCCchhhHHHHHHHHHHHhccCCCeEEEEEeCCCCC-CHHHHHHHHHHhcCCCcEEEEecCCCCCHHHHHH
Confidence 577999999999999999999999765432223456665566655 3455555542 2334677777888888766554
Q ss_pred hhcccCCCCceEEEEcCCcccChHHHHHHHHHHHH
Q 046508 674 ESWYPASDDDFGLLLEDDIEVSPYFYLWIKYALLA 708 (932)
Q Consensus 674 Esf~P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl~ 708 (932)
+++- ....+++++|++|.++.|.++.-+...+..
T Consensus 87 ~g~~-~a~g~~i~~lD~D~~~~~~~l~~l~~~~~~ 120 (243)
T PLN02726 87 HGLK-HASGDFVVIMDADLSHHPKYLPSFIKKQRE 120 (243)
T ss_pred HHHH-HcCCCEEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 4433 234689999999999999998776665543
No 84
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=96.80 E-value=0.0077 Score=60.51 Aligned_cols=103 Identities=18% Similarity=0.071 Sum_probs=70.6
Q ss_pred EEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhhccc--
Q 046508 601 VNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSESWYP-- 678 (932)
Q Consensus 601 IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEsf~P-- 678 (932)
|+|.+||+++.|.++|+||.+..+... .+.| +|...+..+.++++.+...+. +++.+...|.|..+++-.++--
T Consensus 1 viI~~~n~~~~l~~~l~sl~~q~~~~~--eiii-vD~~s~d~t~~~~~~~~~~~~-i~~~~~~~n~g~~~~~n~~~~~a~ 76 (202)
T cd04185 1 AVVVTYNRLDLLKECLDALLAQTRPPD--HIIV-IDNASTDGTAEWLTSLGDLDN-IVYLRLPENLGGAGGFYEGVRRAY 76 (202)
T ss_pred CEEEeeCCHHHHHHHHHHHHhccCCCc--eEEE-EECCCCcchHHHHHHhcCCCc-eEEEECccccchhhHHHHHHHHHh
Confidence 578899999999999999998876533 3544 444334457788887764333 6677777777764332222110
Q ss_pred CCCCceEEEEcCCcccChHHHHHHHHHHH
Q 046508 679 ASDDDFGLLLEDDIEVSPYFYLWIKYALL 707 (932)
Q Consensus 679 ~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl 707 (932)
....+++++|+||..+.|.++.-+...+.
T Consensus 77 ~~~~d~v~~ld~D~~~~~~~l~~l~~~~~ 105 (202)
T cd04185 77 ELGYDWIWLMDDDAIPDPDALEKLLAYAD 105 (202)
T ss_pred ccCCCEEEEeCCCCCcChHHHHHHHHHHh
Confidence 22468999999999999998876665554
No 85
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=96.72 E-value=0.012 Score=63.89 Aligned_cols=107 Identities=21% Similarity=0.091 Sum_probs=74.9
Q ss_pred eEEEEecCCc-hhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHh--cCCCCCCcEEEEeccccchhhhhhhhc
Q 046508 600 SVNIVTQNRV-HSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVST--FDWPHGPKTLRRRIIQGGLIRAVSESW 676 (932)
Q Consensus 600 ~IvIfaynRp-~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~--f~WP~g~vtlr~Ri~n~GLir~VlEsf 676 (932)
.|+|.+||+. +.|.++|.||.+..+......|.|-=|.+.|..+....+. ... ...+++.+...|.|..++.-.+.
T Consensus 1 SIIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~-~~~v~vi~~~~n~G~~~a~N~g~ 79 (299)
T cd02510 1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKY-LPKVKVLRLKKREGLIRARIAGA 79 (299)
T ss_pred CEEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhc-CCcEEEEEcCCCCCHHHHHHHHH
Confidence 4789999999 9999999999988765332356665556666544433221 111 23578888888999866543332
Q ss_pred ccCCCCceEEEEcCCcccChHHHHHHHHHHHH
Q 046508 677 YPASDDDFGLLLEDDIEVSPYFYLWIKYALLA 708 (932)
Q Consensus 677 ~P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl~ 708 (932)
- ....+|+++|++|++++|.++.-|-..+..
T Consensus 80 ~-~A~gd~i~fLD~D~~~~~~wL~~ll~~l~~ 110 (299)
T cd02510 80 R-AATGDVLVFLDSHCEVNVGWLEPLLARIAE 110 (299)
T ss_pred H-HccCCEEEEEeCCcccCccHHHHHHHHHHh
Confidence 2 225699999999999999999887777764
No 86
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=96.72 E-value=0.0083 Score=58.86 Aligned_cols=102 Identities=21% Similarity=0.185 Sum_probs=63.6
Q ss_pred EEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcC--CCCCCcEEEEeccccchhhhhhhhccc
Q 046508 601 VNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFD--WPHGPKTLRRRIIQGGLIRAVSESWYP 678 (932)
Q Consensus 601 IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~--WP~g~vtlr~Ri~n~GLir~VlEsf~P 678 (932)
|+|.+||+++.|+++|.||.+..+. ...|.|.-|.+.| .+.++++.+. .+...+.+++...+.|...+. ..-..
T Consensus 1 ivip~~n~~~~l~~~l~sl~~q~~~--~~eiivvdd~s~d-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-n~g~~ 76 (182)
T cd06420 1 LIITTYNRPEALELVLKSVLNQSIL--PFEVIIADDGSTE-ETKELIEEFKSQFPIPIKHVWQEDEGFRKAKIR-NKAIA 76 (182)
T ss_pred CEEeecCChHHHHHHHHHHHhccCC--CCEEEEEeCCCch-hHHHHHHHHHhhcCCceEEEEcCCcchhHHHHH-HHHHH
Confidence 5788999999999999999987654 3456665566544 4455555442 122223333333333443221 11112
Q ss_pred CCCCceEEEEcCCcccChHHHHHHHHHH
Q 046508 679 ASDDDFGLLLEDDIEVSPYFYLWIKYAL 706 (932)
Q Consensus 679 ~~~~s~vIVLEDDlevSP~Fy~Ylk~AL 706 (932)
....+|+++|++|..++|.|+.-+...+
T Consensus 77 ~a~g~~i~~lD~D~~~~~~~l~~~~~~~ 104 (182)
T cd06420 77 AAKGDYLIFIDGDCIPHPDFIADHIELA 104 (182)
T ss_pred HhcCCEEEEEcCCcccCHHHHHHHHHHh
Confidence 2356899999999999999887655443
No 87
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=96.63 E-value=0.016 Score=59.81 Aligned_cols=107 Identities=18% Similarity=0.221 Sum_probs=67.3
Q ss_pred CceeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCH---HHHHHHHhcCCCCCCcEEEEeccccch-hhhh
Q 046508 597 MRISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDE---ATIKLVSTFDWPHGPKTLRRRIIQGGL-IRAV 672 (932)
Q Consensus 597 ~~i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~---~~~~~l~~f~WP~g~vtlr~Ri~n~GL-ir~V 672 (932)
+.|.|+|-+||..+.|.++|+||.+-+|..+...|.| +|...|. .++++...+.=...++....+-.+.|- ..++
T Consensus 1 p~vSViIp~yNe~~~l~~~L~sl~~q~~~~~~~eIiV-vD~s~D~t~~~~~~~~~~~~~~~~~i~~~~~~~~~G~k~~a~ 79 (232)
T cd06437 1 PMVTVQLPVFNEKYVVERLIEAACALDYPKDRLEIQV-LDDSTDETVRLAREIVEEYAAQGVNIKHVRRADRTGYKAGAL 79 (232)
T ss_pred CceEEEEecCCcHHHHHHHHHHHHhcCCCccceEEEE-EECCCCcHHHHHHHHHHHHhhcCCceEEEECCCCCCCchHHH
Confidence 4689999999999999999999999888765555544 4545453 233344433111123333344444452 2222
Q ss_pred hhhcccCCCCceEEEEcCCcccChHHHHHHHHH
Q 046508 673 SESWYPASDDDFGLLLEDDIEVSPYFYLWIKYA 705 (932)
Q Consensus 673 lEsf~P~~~~s~vIVLEDDlevSP~Fy~Ylk~A 705 (932)
-.++ -....+|++++++|..+.|.++.-+...
T Consensus 80 n~g~-~~a~~~~i~~~DaD~~~~~~~l~~~~~~ 111 (232)
T cd06437 80 AEGM-KVAKGEYVAIFDADFVPPPDFLQKTPPY 111 (232)
T ss_pred HHHH-HhCCCCEEEEEcCCCCCChHHHHHhhhh
Confidence 1121 1225789999999999999998775543
No 88
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=96.55 E-value=0.015 Score=67.34 Aligned_cols=109 Identities=11% Similarity=0.072 Sum_probs=78.4
Q ss_pred CCceeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhh
Q 046508 596 RMRISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSES 675 (932)
Q Consensus 596 k~~i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEs 675 (932)
.|.+.|+|-+||....+.++|+||.+-+|.. .++.|--|.+.|. +.+.++.+.=.+.++.+.++..|.|-..+. ..
T Consensus 74 ~p~vsViIP~yNE~~~i~~~l~sll~q~yp~--~eIivVdDgs~D~-t~~~~~~~~~~~~~v~vv~~~~n~Gka~Al-N~ 149 (444)
T PRK14583 74 HPLVSILVPCFNEGLNARETIHAALAQTYTN--IEVIAINDGSSDD-TAQVLDALLAEDPRLRVIHLAHNQGKAIAL-RM 149 (444)
T ss_pred CCcEEEEEEeCCCHHHHHHHHHHHHcCCCCC--eEEEEEECCCCcc-HHHHHHHHHHhCCCEEEEEeCCCCCHHHHH-HH
Confidence 4779999999999999999999999998873 4566655665553 444444432123467788877888865443 22
Q ss_pred cccCCCCceEEEEcCCcccChHHHHHHHHHHHH
Q 046508 676 WYPASDDDFGLLLEDDIEVSPYFYLWIKYALLA 708 (932)
Q Consensus 676 f~P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl~ 708 (932)
.......+++++++.|..+.|.++..+...+.+
T Consensus 150 gl~~a~~d~iv~lDAD~~~~~d~L~~lv~~~~~ 182 (444)
T PRK14583 150 GAAAARSEYLVCIDGDALLDKNAVPYLVAPLIA 182 (444)
T ss_pred HHHhCCCCEEEEECCCCCcCHHHHHHHHHHHHh
Confidence 122335799999999999999999888776653
No 89
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=96.54 E-value=0.024 Score=56.66 Aligned_cols=104 Identities=13% Similarity=0.023 Sum_probs=75.6
Q ss_pred EEEEecCCc--hhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhhccc
Q 046508 601 VNIVTQNRV--HSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSESWYP 678 (932)
Q Consensus 601 IvIfaynRp--~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEsf~P 678 (932)
|+|-+||+. +.|.++|+||.+-.+.. ..+.|--|.+.+..+.++++.+.--+. +.+.++..|.|...+.-.++-
T Consensus 2 viip~~n~~~~~~l~~~l~Sl~~q~~~~--~eiiivdd~ss~d~t~~~~~~~~~~~~-i~~i~~~~n~G~~~a~N~g~~- 77 (201)
T cd04195 2 VLMSVYIKEKPEFLREALESILKQTLPP--DEVVLVKDGPVTQSLNEVLEEFKRKLP-LKVVPLEKNRGLGKALNEGLK- 77 (201)
T ss_pred EEEEccccchHHHHHHHHHHHHhcCCCC--cEEEEEECCCCchhHHHHHHHHHhcCC-eEEEEcCccccHHHHHHHHHH-
Confidence 677888875 69999999999987752 345554466657777888877653333 777777788898555423322
Q ss_pred CCCCceEEEEcCCcccChHHHHHHHHHHHH
Q 046508 679 ASDDDFGLLLEDDIEVSPYFYLWIKYALLA 708 (932)
Q Consensus 679 ~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl~ 708 (932)
....+|+++|++|.++.|.++.=+...+..
T Consensus 78 ~a~gd~i~~lD~Dd~~~~~~l~~~~~~~~~ 107 (201)
T cd04195 78 HCTYDWVARMDTDDISLPDRFEKQLDFIEK 107 (201)
T ss_pred hcCCCEEEEeCCccccCcHHHHHHHHHHHh
Confidence 235689999999999999999888777764
No 90
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=96.46 E-value=0.017 Score=57.69 Aligned_cols=103 Identities=17% Similarity=0.114 Sum_probs=71.1
Q ss_pred EEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhhccc--
Q 046508 601 VNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSESWYP-- 678 (932)
Q Consensus 601 IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEsf~P-- 678 (932)
|+|-+||..+.+.++|+||.+.+|+.....+.|-.|.+.| .+.+.++.+. ..+.+++...+.|...++-.++--
T Consensus 1 VvIp~~ne~~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D-~t~~~~~~~~---~~~~~~~~~~~~gk~~aln~g~~~a~ 76 (183)
T cd06438 1 ILIPAHNEEAVIGNTVRSLKAQDYPRELYRIFVVADNCTD-DTAQVARAAG---ATVLERHDPERRGKGYALDFGFRHLL 76 (183)
T ss_pred CEEeccchHHHHHHHHHHHHhcCCCCcccEEEEEeCCCCc-hHHHHHHHcC---CeEEEeCCCCCCCHHHHHHHHHHHHH
Confidence 5778999999999999999998886544556665566554 4667777763 223344444566653332111111
Q ss_pred --CCCCceEEEEcCCcccChHHHHHHHHHHH
Q 046508 679 --ASDDDFGLLLEDDIEVSPYFYLWIKYALL 707 (932)
Q Consensus 679 --~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl 707 (932)
....+++++++.|..+.|.|+.-+..++.
T Consensus 77 ~~~~~~d~v~~~DaD~~~~p~~l~~l~~~~~ 107 (183)
T cd06438 77 NLADDPDAVVVFDADNLVDPNALEELNARFA 107 (183)
T ss_pred hcCCCCCEEEEEcCCCCCChhHHHHHHHHHh
Confidence 12468999999999999999999988775
No 91
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.35 E-value=0.0094 Score=67.97 Aligned_cols=100 Identities=14% Similarity=0.135 Sum_probs=78.2
Q ss_pred cEEEEEEcCCch---hHHHHHHHHHcCCCC--CceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCCcc-cccchhhh
Q 046508 177 KVTVILNHFKRK---TLCAQLDSLLQQTLP--FQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYDFK-YYGRFQMA 250 (932)
Q Consensus 177 ~VtaVVvTYNR~---~L~e~L~aLl~QT~~--~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N~G-gaGgF~~a 250 (932)
-.++| .||--. .|...+-++|+||-+ ++|||.|||+|.|-+ .-+.|..+ .++++.++++.-| .-.|..+|
T Consensus 125 ~Tsvi-ITfHNEARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dpe-d~~~L~ri--~kvr~LRN~~ReGLirSRvrGA 200 (559)
T KOG3738|consen 125 PTSVI-ITFHNEARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDPE-DGKLLKRI--PKVRVLRNNEREGLIRSRVRGA 200 (559)
T ss_pred CceEE-EEeccHHHHHHHHHHHHHHcCChHHhhheeEEecCCCCChH-HHHHHhhh--heeeeecccchhhhhhhhcccc
Confidence 34444 455443 488899999999864 899999999999853 22333333 5789999999888 56677777
Q ss_pred hhcCCcEEEEEcCCCCCchhHHHHHHhhcc
Q 046508 251 LQTEADLVYIVDDDMIPGRKMLQILSHVAG 280 (932)
Q Consensus 251 ~~~~~dyVwimDDD~IP~~~~Le~Ll~~~g 280 (932)
--+.+.++-|+|--|-....|||-|++-..
T Consensus 201 dvA~a~vltFLDSHcEvN~~WLePLL~Rva 230 (559)
T KOG3738|consen 201 DVAQATVLTFLDSHCEVNEGWLEPLLERVA 230 (559)
T ss_pred ccccceEEEEEecceeecchhhHHHHHHHh
Confidence 678899999999999999999999997654
No 92
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=96.35 E-value=0.0063 Score=61.06 Aligned_cols=112 Identities=17% Similarity=0.201 Sum_probs=65.2
Q ss_pred EEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcCCCCCCCCccc--cceEE
Q 046508 257 LVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITV--DKIVQ 334 (932)
Q Consensus 257 yVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~~~~--~rl~~ 334 (932)
||.++|+|+++++++|+++..... + +++-+..|++.+.+ ...-+.....+. |.-....+... ..-..
T Consensus 1 ~v~~~DaDt~~~~d~l~~~~~~~~-~---~~~~~vq~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 69 (193)
T PF13632_consen 1 YVLFLDADTRLPPDFLERLVAALE-D---PKVDAVQGPIIFRN-RGSLLTRLQDFE------YAISHGLSRLSQSSLGRP 69 (193)
T ss_pred CEEEEcCCCCCChHHHHHHHHHHh-C---CCceEEEccEEecC-CCChhheeehhh------hhhhhhhhHHHHHhcCCC
Confidence 789999999999999999986543 1 23444456665542 211111110000 00000000000 00012
Q ss_pred eccccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeee
Q 046508 335 VDFLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVL 383 (932)
Q Consensus 335 ~d~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vl 383 (932)
.-+.|++.++|++.++.. |+ .....+||+++|..+.+ +|..+..+
T Consensus 70 ~~~~G~~~~~r~~~l~~vg~~~---~~~~~~ED~~l~~~l~~-~G~~~~~~ 116 (193)
T PF13632_consen 70 LFLSGSGMLFRREALREVGGFD---DPFSIGEDMDLGFRLRR-AGYRIVYV 116 (193)
T ss_pred ccccCcceeeeHHHHHHhCccc---ccccccchHHHHHHHHH-CCCEEEEe
Confidence 237788899999999976 34 23456799999999998 78777544
No 93
>PRK10018 putative glycosyl transferase; Provisional
Probab=96.32 E-value=0.039 Score=60.58 Aligned_cols=108 Identities=18% Similarity=0.095 Sum_probs=79.7
Q ss_pred CCceeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCC-HHHHHHHHhcCCCCCCcEEEEeccccchhhhhhh
Q 046508 596 RMRISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVD-EATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSE 674 (932)
Q Consensus 596 k~~i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D-~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlE 674 (932)
.|.|.|+|-+||+...+.++|+|+.+-.|. ...|.|-=|.+.| ..+.++++.+.. .++++.+...|.|...+.-.
T Consensus 4 ~p~VSVIip~yN~~~~l~~~l~Svl~Qt~~--~~EiIVVDDgS~~~~~~~~~~~~~~~--~ri~~i~~~~n~G~~~a~N~ 79 (279)
T PRK10018 4 NPLISIYMPTWNRQQLAIRAIKSVLRQDYS--NWEMIIVDDCSTSWEQLQQYVTALND--PRITYIHNDINSGACAVRNQ 79 (279)
T ss_pred CCEEEEEEEeCCCHHHHHHHHHHHHhCCCC--CeEEEEEECCCCCHHHHHHHHHHcCC--CCEEEEECCCCCCHHHHHHH
Confidence 678999999999999999999999988775 3566666666666 346678777643 46888888889997543212
Q ss_pred hcccCCCCceEEEEcCCcccChHHHHHHHHHHHH
Q 046508 675 SWYPASDDDFGLLLEDDIEVSPYFYLWIKYALLA 708 (932)
Q Consensus 675 sf~P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl~ 708 (932)
+. .....+|+++|++|-++.|..+.=+-..+..
T Consensus 80 gi-~~a~g~~I~~lDaDD~~~p~~l~~~~~~~~~ 112 (279)
T PRK10018 80 AI-MLAQGEYITGIDDDDEWTPNRLSVFLAHKQQ 112 (279)
T ss_pred HH-HHcCCCEEEEECCCCCCCccHHHHHHHHHHh
Confidence 21 1235789999999999999988765555543
No 94
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=96.30 E-value=0.027 Score=51.47 Aligned_cols=98 Identities=19% Similarity=0.189 Sum_probs=66.6
Q ss_pred EEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhhcccCC
Q 046508 601 VNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSESWYPAS 680 (932)
Q Consensus 601 IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEsf~P~~ 680 (932)
|+|.+++++..+.++|+|+.+..+. ...+.|--+.. ++++.+.+..............+..+.|...++-.+ ....
T Consensus 1 iii~~~~~~~~l~~~l~s~~~~~~~--~~~i~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~ 76 (156)
T cd00761 1 VIIPAYNEEPYLERCLESLLAQTYP--NFEVIVVDDGS-TDGTLEILEEYAKKDPRVIRVINEENQGLAAARNAG-LKAA 76 (156)
T ss_pred CEEeecCcHHHHHHHHHHHHhCCcc--ceEEEEEeCCC-CccHHHHHHHHHhcCCCeEEEEecCCCChHHHHHHH-HHHh
Confidence 5788999999999999999999872 33566644443 444555555543222345666677777775543222 2222
Q ss_pred CCceEEEEcCCcccChHHHHHH
Q 046508 681 DDDFGLLLEDDIEVSPYFYLWI 702 (932)
Q Consensus 681 ~~s~vIVLEDDlevSP~Fy~Yl 702 (932)
..++++++++|..+.|.++..+
T Consensus 77 ~~d~v~~~d~D~~~~~~~~~~~ 98 (156)
T cd00761 77 RGEYILFLDADDLLLPDWLERL 98 (156)
T ss_pred cCCEEEEECCCCccCccHHHHH
Confidence 5789999999999999988776
No 95
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=96.22 E-value=0.043 Score=56.25 Aligned_cols=102 Identities=17% Similarity=0.130 Sum_probs=69.4
Q ss_pred ceeEEEEecCCc-hhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhhc
Q 046508 598 RISVNIVTQNRV-HSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSESW 676 (932)
Q Consensus 598 ~i~IvIfaynRp-~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEsf 676 (932)
.|.|+|-+||++ +.|.++|+||.+-. ...+.|-.|.+.|+ +.+.+.... ++..+.+. +..+.|...++-.++
T Consensus 1 ~isVvIp~~ne~~~~l~~~l~sl~~q~----~~eiivvdd~s~d~-~~~~l~~~~-~~~~~~v~-~~~~~g~~~a~n~g~ 73 (235)
T cd06434 1 DVTVIIPVYDEDPDVFRECLRSILRQK----PLEIIVVTDGDDEP-YLSILSQTV-KYGGIFVI-TVPHPGKRRALAEGI 73 (235)
T ss_pred CeEEEEeecCCChHHHHHHHHHHHhCC----CCEEEEEeCCCChH-HHHHHHhhc-cCCcEEEE-ecCCCChHHHHHHHH
Confidence 378999999999 99999999999865 24566655555554 444543332 23334444 456778766553443
Q ss_pred ccCCCCceEEEEcCCcccChHHHHHHHHHHH
Q 046508 677 YPASDDDFGLLLEDDIEVSPYFYLWIKYALL 707 (932)
Q Consensus 677 ~P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl 707 (932)
- ....+++++|++|..+.|.++.=+..++.
T Consensus 74 ~-~a~~d~v~~lD~D~~~~~~~l~~l~~~~~ 103 (235)
T cd06434 74 R-HVTTDIVVLLDSDTVWPPNALPEMLKPFE 103 (235)
T ss_pred H-HhCCCEEEEECCCceeChhHHHHHHHhcc
Confidence 2 22579999999999999998766655544
No 96
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=96.17 E-value=0.037 Score=54.28 Aligned_cols=101 Identities=17% Similarity=0.154 Sum_probs=68.4
Q ss_pred eEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhhcccC
Q 046508 600 SVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSESWYPA 679 (932)
Q Consensus 600 ~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEsf~P~ 679 (932)
.|+|.+||+++.|.++|.||.+-.+.. ..+.|--|.+.| .+.+.++.+.- .+.......+.|...++-.++- .
T Consensus 1 sivi~~~n~~~~l~~~l~sl~~q~~~~--~evivvDd~s~d-~~~~~~~~~~~---~~~~~~~~~~~g~~~a~n~~~~-~ 73 (202)
T cd06433 1 SIITPTYNQAETLEETIDSVLSQTYPN--IEYIVIDGGSTD-GTVDIIKKYED---KITYWISEPDKGIYDAMNKGIA-L 73 (202)
T ss_pred CEEEeccchHHHHHHHHHHHHhCCCCC--ceEEEEeCCCCc-cHHHHHHHhHh---hcEEEEecCCcCHHHHHHHHHH-H
Confidence 378889999999999999998776542 456554444444 46677777642 2444455678887555433322 2
Q ss_pred CCCceEEEEcCCcccChHHHHHHHHHHH
Q 046508 680 SDDDFGLLLEDDIEVSPYFYLWIKYALL 707 (932)
Q Consensus 680 ~~~s~vIVLEDDlevSP~Fy~Ylk~ALl 707 (932)
...+|+++|++|..+.|.++.-+-..+.
T Consensus 74 a~~~~v~~ld~D~~~~~~~~~~~~~~~~ 101 (202)
T cd06433 74 ATGDIIGFLNSDDTLLPGALLAVVAAFA 101 (202)
T ss_pred cCCCEEEEeCCCcccCchHHHHHHHHHH
Confidence 2468999999999999987766553333
No 97
>PRK10073 putative glycosyl transferase; Provisional
Probab=96.16 E-value=0.038 Score=61.73 Aligned_cols=107 Identities=15% Similarity=0.166 Sum_probs=74.7
Q ss_pred CCceeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhh
Q 046508 596 RMRISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSES 675 (932)
Q Consensus 596 k~~i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEs 675 (932)
.+.|.|+|-+||+.+.|.++|.||.+-.|. ...|.|--|.+.|. +.++++.+.=...++.+.+ ..|.|...+.-.+
T Consensus 5 ~p~vSVIIP~yN~~~~L~~~l~Sl~~Qt~~--~~EIIiVdDgStD~-t~~i~~~~~~~~~~i~vi~-~~n~G~~~arN~g 80 (328)
T PRK10073 5 TPKLSIIIPLYNAGKDFRAFMESLIAQTWT--ALEIIIVNDGSTDN-SVEIAKHYAENYPHVRLLH-QANAGVSVARNTG 80 (328)
T ss_pred CCeEEEEEeccCCHHHHHHHHHHHHhCCCC--CeEEEEEeCCCCcc-HHHHHHHHHhhCCCEEEEE-CCCCChHHHHHHH
Confidence 467999999999999999999999988764 34566666666653 3345554421234577765 4688985443112
Q ss_pred cccCCCCceEEEEcCCcccChHHHHHHHHHHH
Q 046508 676 WYPASDDDFGLLLEDDIEVSPYFYLWIKYALL 707 (932)
Q Consensus 676 f~P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl 707 (932)
......+|+++|++|-.+.|.++.-+-..+.
T Consensus 81 -l~~a~g~yi~flD~DD~~~p~~l~~l~~~~~ 111 (328)
T PRK10073 81 -LAVATGKYVAFPDADDVVYPTMYETLMTMAL 111 (328)
T ss_pred -HHhCCCCEEEEECCCCccChhHHHHHHHHHH
Confidence 1223568999999999999999887766554
No 98
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=96.05 E-value=0.03 Score=55.41 Aligned_cols=103 Identities=16% Similarity=0.141 Sum_probs=68.9
Q ss_pred EEEEecCCchhHHHHHHHHHhccCC-CCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhhcccC
Q 046508 601 VNIVTQNRVHSLTRLLKSLSNAYYL-GDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSESWYPA 679 (932)
Q Consensus 601 IvIfaynRp~sL~RLL~SL~~AdY~-gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEsf~P~ 679 (932)
|+|.+||+++.+.++|+||.+.... .....+.|--|.+.|. +.+.++.+.=...++++.+...|.|..++.-.++ ..
T Consensus 1 viIp~~n~~~~l~~~l~sl~~~~~~~~~~~eiivvdd~s~d~-t~~~~~~~~~~~~~i~~i~~~~n~G~~~a~n~g~-~~ 78 (181)
T cd04187 1 IVVPVYNEEENLPELYERLKAVLESLGYDYEIIFVDDGSTDR-TLEILRELAARDPRVKVIRLSRNFGQQAALLAGL-DH 78 (181)
T ss_pred CEEeecCchhhHHHHHHHHHHHHHhcCCCeEEEEEeCCCCcc-HHHHHHHHHhhCCCEEEEEecCCCCcHHHHHHHH-Hh
Confidence 5788999999999999999876532 1223566644555443 4455554421223577777778888866542232 23
Q ss_pred CCCceEEEEcCCcccChHHHHHHHHH
Q 046508 680 SDDDFGLLLEDDIEVSPYFYLWIKYA 705 (932)
Q Consensus 680 ~~~s~vIVLEDDlevSP~Fy~Ylk~A 705 (932)
...++++++++|....|.++.=+..+
T Consensus 79 a~~d~i~~~D~D~~~~~~~l~~l~~~ 104 (181)
T cd04187 79 ARGDAVITMDADLQDPPELIPEMLAK 104 (181)
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHH
Confidence 35689999999999999987777665
No 99
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=96.00 E-value=0.066 Score=60.57 Aligned_cols=107 Identities=19% Similarity=0.253 Sum_probs=71.9
Q ss_pred CCceeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcC--CCCCCcEEEEeccccch---hh
Q 046508 596 RMRISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFD--WPHGPKTLRRRIIQGGL---IR 670 (932)
Q Consensus 596 k~~i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~--WP~g~vtlr~Ri~n~GL---ir 670 (932)
.+.+.|+|=++|..+.+.++|+||.+-+|+. ..+.|-.|.+.|+ +.+.++.+. .|..++.+.....+.|. ..
T Consensus 40 ~p~VSViiP~~nee~~l~~~L~Sl~~q~Yp~--~EIivvdd~s~D~-t~~iv~~~~~~~p~~~i~~v~~~~~~G~~~K~~ 116 (373)
T TIGR03472 40 WPPVSVLKPLHGDEPELYENLASFCRQDYPG--FQMLFGVQDPDDP-ALAVVRRLRADFPDADIDLVIDARRHGPNRKVS 116 (373)
T ss_pred CCCeEEEEECCCCChhHHHHHHHHHhcCCCC--eEEEEEeCCCCCc-HHHHHHHHHHhCCCCceEEEECCCCCCCChHHH
Confidence 4668999999999999999999999999975 4455544454553 223433331 35455666655555553 22
Q ss_pred hhhhhcccCCCCceEEEEcCCcccChHHHHHHHHHH
Q 046508 671 AVSESWYPASDDDFGLLLEDDIEVSPYFYLWIKYAL 706 (932)
Q Consensus 671 ~VlEsf~P~~~~s~vIVLEDDlevSP~Fy~Ylk~AL 706 (932)
+.... .....+++++++++|+.++|.|+.-+...+
T Consensus 117 ~l~~~-~~~a~ge~i~~~DaD~~~~p~~L~~lv~~~ 151 (373)
T TIGR03472 117 NLINM-LPHARHDILVIADSDISVGPDYLRQVVAPL 151 (373)
T ss_pred HHHHH-HHhccCCEEEEECCCCCcChhHHHHHHHHh
Confidence 22222 233467999999999999999987766554
No 100
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=95.76 E-value=0.076 Score=54.71 Aligned_cols=102 Identities=14% Similarity=0.105 Sum_probs=67.0
Q ss_pred eEEEEecCCc-hhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHH----HHHHHhcCCCCCCcEEEEeccccch-hhhhh
Q 046508 600 SVNIVTQNRV-HSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEAT----IKLVSTFDWPHGPKTLRRRIIQGGL-IRAVS 673 (932)
Q Consensus 600 ~IvIfaynRp-~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~----~~~l~~f~WP~g~vtlr~Ri~n~GL-ir~Vl 673 (932)
.|+|-+||.. +.|.++|+||.+-+|.. ..|.|--|.+.|... .++++.. ..++.+.+...+.|. ..++-
T Consensus 1 siiip~~ne~~~~l~~~l~sl~~q~~~~--~eiiVvdd~s~D~t~~~~i~~~~~~~---~~~i~~i~~~~~~G~~~~a~n 75 (236)
T cd06435 1 SIHVPCYEEPPEMVKETLDSLAALDYPN--FEVIVIDNNTKDEALWKPVEAHCAQL---GERFRFFHVEPLPGAKAGALN 75 (236)
T ss_pred CeeEeeCCCcHHHHHHHHHHHHhCCCCC--cEEEEEeCCCCchhHHHHHHHHHHHh---CCcEEEEEcCCCCCCchHHHH
Confidence 3778899986 78999999999988753 346554456666543 3455443 134666655555564 33322
Q ss_pred hhcccC-CCCceEEEEcCCcccChHHHHHHHHHH
Q 046508 674 ESWYPA-SDDDFGLLLEDDIEVSPYFYLWIKYAL 706 (932)
Q Consensus 674 Esf~P~-~~~s~vIVLEDDlevSP~Fy~Ylk~AL 706 (932)
.++--. ...+++++|++|..++|.++..+...+
T Consensus 76 ~g~~~a~~~~d~i~~lD~D~~~~~~~l~~l~~~~ 109 (236)
T cd06435 76 YALERTAPDAEIIAVIDADYQVEPDWLKRLVPIF 109 (236)
T ss_pred HHHHhcCCCCCEEEEEcCCCCcCHHHHHHHHHHh
Confidence 221111 135899999999999999998877654
No 101
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=95.60 E-value=0.099 Score=53.67 Aligned_cols=93 Identities=18% Similarity=0.141 Sum_probs=63.4
Q ss_pred EEEecCCc-hhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhhcccC-
Q 046508 602 NIVTQNRV-HSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSESWYPA- 679 (932)
Q Consensus 602 vIfaynRp-~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEsf~P~- 679 (932)
+|.+||+. +.|.++|+||.+.. ..|.| +|...|..+...++. +...+++.+...|.|...+.=.++--.
T Consensus 2 vI~~yn~~~~~l~~~l~sl~~q~-----~~iiv-vDn~s~~~~~~~~~~---~~~~i~~i~~~~n~G~~~a~N~g~~~a~ 72 (237)
T cd02526 2 VVVTYNPDLSKLKELLAALAEQV-----DKVVV-VDNSSGNDIELRLRL---NSEKIELIHLGENLGIAKALNIGIKAAL 72 (237)
T ss_pred EEEEecCCHHHHHHHHHHHhccC-----CEEEE-EeCCCCccHHHHhhc---cCCcEEEEECCCceehHHhhhHHHHHHH
Confidence 57799999 99999999999861 13444 554444334334333 345678888888888754432222111
Q ss_pred -CCCceEEEEcCCcccChHHHHHHH
Q 046508 680 -SDDDFGLLLEDDIEVSPYFYLWIK 703 (932)
Q Consensus 680 -~~~s~vIVLEDDlevSP~Fy~Ylk 703 (932)
...+|+++|++|..+.|.++.-|.
T Consensus 73 ~~~~d~v~~lD~D~~~~~~~l~~l~ 97 (237)
T cd02526 73 ENGADYVLLFDQDSVPPPDMVEKLL 97 (237)
T ss_pred hCCCCEEEEECCCCCcCHhHHHHHH
Confidence 145899999999999999998885
No 102
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=95.58 E-value=0.092 Score=54.90 Aligned_cols=98 Identities=22% Similarity=0.251 Sum_probs=68.1
Q ss_pred ceeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhhcc
Q 046508 598 RISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSESWY 677 (932)
Q Consensus 598 ~i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEsf~ 677 (932)
+|.|+|.+||....|.++|+||.... + .+.|-=+.+.| .+.++++.+ .+.+.++ .+.|...+.-.+ .
T Consensus 1 ~isvii~~~Ne~~~l~~~l~sl~~~~---~--eiivvD~gStD-~t~~i~~~~-----~~~v~~~-~~~g~~~~~n~~-~ 67 (229)
T cd02511 1 TLSVVIITKNEERNIERCLESVKWAV---D--EIIVVDSGSTD-RTVEIAKEY-----GAKVYQR-WWDGFGAQRNFA-L 67 (229)
T ss_pred CEEEEEEeCCcHHHHHHHHHHHhccc---C--EEEEEeCCCCc-cHHHHHHHc-----CCEEEEC-CCCChHHHHHHH-H
Confidence 37899999999999999999997541 1 45553344444 466777754 2556655 777764332111 1
Q ss_pred cCCCCceEEEEcCCcccChHHHHHHHHHHHH
Q 046508 678 PASDDDFGLLLEDDIEVSPYFYLWIKYALLA 708 (932)
Q Consensus 678 P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl~ 708 (932)
.....+++++|++|..++|.++.-+...+..
T Consensus 68 ~~a~~d~vl~lDaD~~~~~~~~~~l~~~~~~ 98 (229)
T cd02511 68 ELATNDWVLSLDADERLTPELADEILALLAT 98 (229)
T ss_pred HhCCCCEEEEEeCCcCcCHHHHHHHHHHHhC
Confidence 1224579999999999999999988887764
No 103
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=95.33 E-value=0.074 Score=54.18 Aligned_cols=105 Identities=17% Similarity=0.047 Sum_probs=71.2
Q ss_pred EEEEecCCchhHHHHHHHHHhccC--CCCCccEEEEeCCCCCHHHHHHHHhcCCCCCC-cEEEEeccccchhhhhhhhcc
Q 046508 601 VNIVTQNRVHSLTRLLKSLSNAYY--LGDEVPISFNMDSKVDEATIKLVSTFDWPHGP-KTLRRRIIQGGLIRAVSESWY 677 (932)
Q Consensus 601 IvIfaynRp~sL~RLL~SL~~AdY--~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~-vtlr~Ri~n~GLir~VlEsf~ 677 (932)
|+|-+||..+.|.++|+||.+..+ ......+.|--|.+.| .+.+.++.+.=.++. +++.+...|.|...++..++-
T Consensus 1 iiip~yN~~~~l~~~l~~l~~~~~~~~~~~~eiivvdd~S~D-~t~~~~~~~~~~~~~~i~~i~~~~n~G~~~a~~~g~~ 79 (211)
T cd04188 1 VVIPAYNEEKRLPPTLEEAVEYLEERPSFSYEIIVVDDGSKD-GTAEVARKLARKNPALIRVLTLPKNRGKGGAVRAGML 79 (211)
T ss_pred CEEcccChHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCCCC-chHHHHHHHHHhCCCcEEEEEcccCCCcHHHHHHHHH
Confidence 578899999999999999988654 1122346664455555 244455443211122 477777788898776655544
Q ss_pred cCCCCceEEEEcCCcccChHHHHHHHHHHH
Q 046508 678 PASDDDFGLLLEDDIEVSPYFYLWIKYALL 707 (932)
Q Consensus 678 P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl 707 (932)
-. ..+|+++|++|..+.|.++.-+-..+.
T Consensus 80 ~a-~gd~i~~ld~D~~~~~~~l~~l~~~~~ 108 (211)
T cd04188 80 AA-RGDYILFADADLATPFEELEKLEEALK 108 (211)
T ss_pred Hh-cCCEEEEEeCCCCCCHHHHHHHHHHHh
Confidence 22 459999999999999999877766643
No 104
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=95.26 E-value=0.075 Score=48.32 Aligned_cols=81 Identities=21% Similarity=0.308 Sum_probs=51.9
Q ss_pred hHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCCccc--ccc-hhhh---hhcCCcEEEEEc
Q 046508 189 TLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYDFKY--YGR-FQMA---LQTEADLVYIVD 262 (932)
Q Consensus 189 ~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N~Gg--aGg-F~~a---~~~~~dyVwimD 262 (932)
.|.+.|...++.- .++|+|+||+|+|+| .++++++.. +.++........ ..+ ...+ ...++|||.++|
T Consensus 6 ~L~~wl~~~~~lG--~d~i~i~d~~s~D~t--~~~l~~~~~--v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~dWvl~~D 79 (97)
T PF13704_consen 6 YLPEWLAHHLALG--VDHIYIYDDGSTDGT--REILRALPG--VGIIRWVDPYRDERRQRAWRNALIERAFDADWVLFLD 79 (97)
T ss_pred HHHHHHHHHHHcC--CCEEEEEECCCCccH--HHHHHhCCC--cEEEEeCCCccchHHHHHHHHHHHHhCCCCCEEEEEe
Confidence 3888888887553 678999999999985 999999854 445544433321 111 1111 124789999999
Q ss_pred CCC--CCch--hHHHHH
Q 046508 263 DDM--IPGR--KMLQIL 275 (932)
Q Consensus 263 DD~--IP~~--~~Le~L 275 (932)
=|= .+.+ ..|..+
T Consensus 80 ~DEfl~~~~~~~~l~~~ 96 (97)
T PF13704_consen 80 ADEFLVPPPGRRSLRDF 96 (97)
T ss_pred eeEEEecCCCCCCHHHh
Confidence 993 2222 356554
No 105
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=95.20 E-value=0.11 Score=52.73 Aligned_cols=93 Identities=24% Similarity=0.233 Sum_probs=60.2
Q ss_pred eeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhhccc
Q 046508 599 ISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSESWYP 678 (932)
Q Consensus 599 i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEsf~P 678 (932)
|.|+|.+||++..+.++|+||.+..+ ....|.|-=+.+.| ++.++++.. .+.+.+ .+.|...+.-.++-
T Consensus 1 vsvii~~~n~~~~l~~~l~sl~~q~~--~~~evivvdd~s~d-~~~~~~~~~-----~~~~~~--~~~g~~~a~n~g~~- 69 (221)
T cd02522 1 LSIIIPTLNEAENLPRLLASLRRLNP--LPLEIIVVDGGSTD-GTVAIARSA-----GVVVIS--SPKGRARQMNAGAA- 69 (221)
T ss_pred CEEEEEccCcHHHHHHHHHHHHhccC--CCcEEEEEeCCCCc-cHHHHHhcC-----CeEEEe--CCcCHHHHHHHHHH-
Confidence 46889999999999999999998776 34456665444444 444566551 233333 23444222111211
Q ss_pred CCCCceEEEEcCCcccChHHHHHH
Q 046508 679 ASDDDFGLLLEDDIEVSPYFYLWI 702 (932)
Q Consensus 679 ~~~~s~vIVLEDDlevSP~Fy~Yl 702 (932)
....++++++++|.+++|.++.=+
T Consensus 70 ~a~~~~i~~~D~D~~~~~~~l~~l 93 (221)
T cd02522 70 AARGDWLLFLHADTRLPPDWDAAI 93 (221)
T ss_pred hccCCEEEEEcCCCCCChhHHHHH
Confidence 123689999999999999888776
No 106
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=95.05 E-value=0.29 Score=55.73 Aligned_cols=111 Identities=16% Similarity=0.172 Sum_probs=69.8
Q ss_pred CCceeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcC--CCC-CCcEEEEecc-c---cc-
Q 046508 596 RMRISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFD--WPH-GPKTLRRRII-Q---GG- 667 (932)
Q Consensus 596 k~~i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~--WP~-g~vtlr~Ri~-n---~G- 667 (932)
.|.+.|+|-++|..+.|.++|+||.+-+|.+ ...+.|--|.+.| .+.++++.+. -|. ..+++.+... + .|
T Consensus 39 ~p~VSVIIpa~Ne~~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD-~T~~i~~~~~~~~~~~~~i~vi~~~~~~~g~~Gk 116 (384)
T TIGR03469 39 WPAVVAVVPARNEADVIGECVTSLLEQDYPG-KLHVILVDDHSTD-GTADIARAAARAYGRGDRLTVVSGQPLPPGWSGK 116 (384)
T ss_pred CCCEEEEEecCCcHhHHHHHHHHHHhCCCCC-ceEEEEEeCCCCC-cHHHHHHHHHHhcCCCCcEEEecCCCCCCCCcch
Confidence 4678999999999999999999999988874 2456665555555 3344444331 121 2455554321 1 23
Q ss_pred ---hhhhhhhhcccCCCCceEEEEcCCcccChHHHHHHHHHHHH
Q 046508 668 ---LIRAVSESWYPASDDDFGLLLEDDIEVSPYFYLWIKYALLA 708 (932)
Q Consensus 668 ---Lir~VlEsf~P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl~ 708 (932)
+..++-++=-...+.++++++++|+++.|.++.=+...+.+
T Consensus 117 ~~A~n~g~~~A~~~~~~gd~llflDaD~~~~p~~l~~lv~~~~~ 160 (384)
T TIGR03469 117 LWAVSQGIAAARTLAPPADYLLLTDADIAHGPDNLARLVARARA 160 (384)
T ss_pred HHHHHHHHHHHhccCCCCCEEEEECCCCCCChhHHHHHHHHHHh
Confidence 22333222000012689999999999999987776666553
No 107
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=95.04 E-value=0.11 Score=52.79 Aligned_cols=101 Identities=18% Similarity=0.123 Sum_probs=62.1
Q ss_pred EEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEec---cccchhhhh---hh
Q 046508 601 VNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRI---IQGGLIRAV---SE 674 (932)
Q Consensus 601 IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri---~n~GLir~V---lE 674 (932)
|+|-+||..+.|.++|+||.+.. ....|.|--|.+ +..+.+.++ +.-....+++.++. .+.|-..++ ++
T Consensus 1 ViIp~~Ne~~~l~~~l~sl~~~~---~~~eIivvdd~S-~D~t~~~~~-~~~~~~~v~~i~~~~~~~~~Gk~~aln~g~~ 75 (191)
T cd06436 1 VLVPCLNEEAVIQRTLASLLRNK---PNFLVLVIDDAS-DDDTAGIVR-LAITDSRVHLLRRHLPNARTGKGDALNAAYD 75 (191)
T ss_pred CEEeccccHHHHHHHHHHHHhCC---CCeEEEEEECCC-CcCHHHHHh-heecCCcEEEEeccCCcCCCCHHHHHHHHHH
Confidence 57789999999999999999865 233444444444 444555665 22123456666553 345542221 12
Q ss_pred hcc----c--CC-CCceEEEEcCCcccChHHHHHHHHHH
Q 046508 675 SWY----P--AS-DDDFGLLLEDDIEVSPYFYLWIKYAL 706 (932)
Q Consensus 675 sf~----P--~~-~~s~vIVLEDDlevSP~Fy~Ylk~AL 706 (932)
.-. . .+ ..+++++++.|..+.|.++..+...+
T Consensus 76 ~~~~~~~~~g~~~~~d~v~~~DaD~~~~~~~l~~~~~~~ 114 (191)
T cd06436 76 QIRQILIEEGADPERVIIAVIDADGRLDPNALEAVAPYF 114 (191)
T ss_pred HHhhhccccccCCCccEEEEECCCCCcCHhHHHHHHHhh
Confidence 100 0 01 23689999999999999988766543
No 108
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=94.98 E-value=0.15 Score=56.03 Aligned_cols=112 Identities=22% Similarity=0.181 Sum_probs=78.2
Q ss_pred CCceeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhh
Q 046508 596 RMRISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSES 675 (932)
Q Consensus 596 k~~i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEs 675 (932)
.+.+.|+|++|||.+.+..+|.||.++.+..+ ..|.+|-.....+.+.++... ...+.+.+--.|.|-..+.-.+
T Consensus 2 ~~~i~~iiv~yn~~~~l~~~l~~l~~~~~~~~---~iv~vDn~s~d~~~~~~~~~~--~~~v~~i~~~~NlG~agg~n~g 76 (305)
T COG1216 2 MPKISIIIVTYNRGEDLVECLASLAAQTYPDD---VIVVVDNGSTDGSLEALKARF--FPNVRLIENGENLGFAGGFNRG 76 (305)
T ss_pred CcceEEEEEecCCHHHHHHHHHHHhcCCCCCc---EEEEccCCCCCCCHHHHHhhc--CCcEEEEEcCCCccchhhhhHH
Confidence 57899999999999999999999999997643 333455332334445554421 4678888988999975543111
Q ss_pred cc-cCCC-CceEEEEcCCcccChHHHHHHHHHHHHhcCC
Q 046508 676 WY-PASD-DDFGLLLEDDIEVSPYFYLWIKYALLAYHYD 712 (932)
Q Consensus 676 f~-P~~~-~s~vIVLEDDlevSP~Fy~Ylk~ALl~Y~ys 712 (932)
+- .... +.|+++|-||+++.|.++.=|-.++.++...
T Consensus 77 ~~~a~~~~~~~~l~LN~D~~~~~~~l~~ll~~~~~~~~~ 115 (305)
T COG1216 77 IKYALAKGDDYVLLLNPDTVVEPDLLEELLKAAEEDPAA 115 (305)
T ss_pred HHHHhcCCCcEEEEEcCCeeeChhHHHHHHHHHHhCCCC
Confidence 11 1111 2299999999999999998777777776543
No 109
>PRK10063 putative glycosyl transferase; Provisional
Probab=94.76 E-value=0.22 Score=53.49 Aligned_cols=105 Identities=13% Similarity=0.080 Sum_probs=67.5
Q ss_pred CceeEEEEecCCchhHHHHHHHHHhc-cCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhh
Q 046508 597 MRISVNIVTQNRVHSLTRLLKSLSNA-YYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSES 675 (932)
Q Consensus 597 ~~i~IvIfaynRp~sL~RLL~SL~~A-dY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEs 675 (932)
|.|.|+|.+||..+.|.++|+||.+. ........+.|-=|.+.| .+.++++++.= ..++.+.. ..+.|...++=.+
T Consensus 1 ~~vSVIi~~yN~~~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD-~t~~i~~~~~~-~~~i~~i~-~~~~G~~~A~N~G 77 (248)
T PRK10063 1 MLLSVITVAFRNLEGIVKTHASLRHLAQDPGISFEWIVVDGGSND-GTREFLENLNG-IFNLRFVS-EPDNGIYDAMNKG 77 (248)
T ss_pred CeEEEEEEeCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEECcCcc-cHHHHHHHhcc-cCCEEEEE-CCCCCHHHHHHHH
Confidence 57899999999999999999999753 222333455554444444 46677877631 12355554 3467875553222
Q ss_pred cccCCCCceEEEEcCCcccChHHHHHHHHH
Q 046508 676 WYPASDDDFGLLLEDDIEVSPYFYLWIKYA 705 (932)
Q Consensus 676 f~P~~~~s~vIVLEDDlevSP~Fy~Ylk~A 705 (932)
. .....+++++|++|-...|..+..+++.
T Consensus 78 i-~~a~g~~v~~ld~DD~~~~~~~~~~~~~ 106 (248)
T PRK10063 78 I-AMAQGRFALFLNSGDIFHQDAANFVRQL 106 (248)
T ss_pred H-HHcCCCEEEEEeCCcccCcCHHHHHHHH
Confidence 2 2235689999997766778776666544
No 110
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=94.67 E-value=0.26 Score=62.12 Aligned_cols=100 Identities=10% Similarity=0.016 Sum_probs=71.2
Q ss_pred CceeEEEEecCCch-hHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccc-hhhhhhh
Q 046508 597 MRISVNIVTQNRVH-SLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGG-LIRAVSE 674 (932)
Q Consensus 597 ~~i~IvIfaynRp~-sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~G-Lir~VlE 674 (932)
|.++|+|=+||-+. -+.+++.++.+-+|+.+..++.|--|. .++++.++++.+ .+.+.+|..|.| -..++ .
T Consensus 260 P~VsViIPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDg-S~D~t~~la~~~-----~v~yI~R~~n~~gKAGnL-N 332 (852)
T PRK11498 260 PTVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDG-GREEFRQFAQEV-----GVKYIARPTHEHAKAGNI-N 332 (852)
T ss_pred CcEEEEEecCCCcHHHHHHHHHHHHhccCCCCceEEEEEeCC-CChHHHHHHHHC-----CcEEEEeCCCCcchHHHH-H
Confidence 68999999999985 457899999999999776666664444 456678888875 366666765543 22222 2
Q ss_pred hcccCCCCceEEEEcCCcccChHHHHHHH
Q 046508 675 SWYPASDDDFGLLLEDDIEVSPYFYLWIK 703 (932)
Q Consensus 675 sf~P~~~~s~vIVLEDDlevSP~Fy~Ylk 703 (932)
........+|+++++.|.++.|.|+.-+.
T Consensus 333 ~aL~~a~GEyIavlDAD~ip~pdfL~~~V 361 (852)
T PRK11498 333 NALKYAKGEFVAIFDCDHVPTRSFLQMTM 361 (852)
T ss_pred HHHHhCCCCEEEEECCCCCCChHHHHHHH
Confidence 22222356999999999999999987554
No 111
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=94.48 E-value=0.025 Score=67.87 Aligned_cols=106 Identities=16% Similarity=0.184 Sum_probs=89.6
Q ss_pred CCCcEEEEEEcCCchh--HHHHHHHHHcCCCC--CceEEEEeCCCCChhhHHHHHhhc--CCCceEEEecCCCcc-cccc
Q 046508 174 NRPKVTVILNHFKRKT--LCAQLDSLLQQTLP--FQHVWVLSFGSPNELSLKRIVNSY--NDSRISFISSSYDFK-YYGR 246 (932)
Q Consensus 174 ~~~~VtaVVvTYNR~~--L~e~L~aLl~QT~~--~~~IiVvdnaStD~t~t~~~l~~~--~~~~i~~i~~~~N~G-gaGg 246 (932)
+.+++++||+-+|=.. |...+-++++.|-+ +.|||+|||+|+.+. ..+.|.+| ....++++++.+..| .-+|
T Consensus 140 ~Lp~~Svii~f~nE~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~~~-l~~~Ld~y~k~~~~v~i~r~~~R~GLIrAR 218 (578)
T KOG3736|consen 140 KLPTTSVIIIFHNEAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDRDH-LKDKLEEYVKRFSKVRILRTKKREGLIRAR 218 (578)
T ss_pred ccCCCceEEEEecCCCcchhheEEeehccCChhHeEEEEEeecCcchhh-hhhhhHHHHhhhcceeEEeecchhhhHHHH
Confidence 5678999999999863 88888899998865 889999999999874 34445555 223499999999999 7788
Q ss_pred hhhhhhcCCcEEEEEcCCCCCchhHHHHHHhhcc
Q 046508 247 FQMALQTEADLVYIVDDDMIPGRKMLQILSHVAG 280 (932)
Q Consensus 247 F~~a~~~~~dyVwimDDD~IP~~~~Le~Ll~~~g 280 (932)
-..|-.+++|-+-++|==|=....|||-|+..+.
T Consensus 219 l~GA~~A~geVL~FLDsHcE~n~gWLePLL~~I~ 252 (578)
T KOG3736|consen 219 LLGASMATGEVLTFLDSHCEVNVGWLEPLLARIA 252 (578)
T ss_pred hhhhhhhhchheeeeecceeEecCcchHHHHHhh
Confidence 8888889999999999999999999999998876
No 112
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=94.45 E-value=0.03 Score=57.28 Aligned_cols=134 Identities=15% Similarity=0.066 Sum_probs=76.4
Q ss_pred EEecCCCcccccch-hh--h-hh-cCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCccc
Q 046508 234 FISSSYDFKYYGRF-QM--A-LQ-TEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSY 308 (932)
Q Consensus 234 ~i~~~~N~GgaGgF-~~--a-~~-~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y 308 (932)
++-.+...|.++-= ++ + .+ +++|+|||.|+|+.+.|++|+.|+.... .+++-..+| +|+.....+|.+.
T Consensus 6 lvv~~~~~g~N~Kv~nL~~~~~~~a~~d~~~~~DsDi~v~p~~L~~lv~~l~----~p~vglVt~--~~~~~~~~~~~~~ 79 (175)
T PF13506_consen 6 LVVGGPPRGCNPKVNNLAQGLEAGAKYDYLVISDSDIRVPPDYLRELVAPLA----DPGVGLVTG--LPRGVPARGFWSR 79 (175)
T ss_pred EEECCCCCCCChHHHHHHHHHHhhCCCCEEEEECCCeeECHHHHHHHHHHHh----CCCCcEEEe--cccccCCcCHHHH
Confidence 55555566655421 11 2 33 7899999999999999999999986543 122222333 3443222223221
Q ss_pred ccccccccCcCCCCCCCCccccceEEeccccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCeeee
Q 046508 309 RKFRSKEAGLYLPDPAYDITVDKIVQVDFLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSFVL 383 (932)
Q Consensus 309 ~~~~s~~~g~~~p~~~y~~~~~rl~~~d~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vl 383 (932)
- + ..++ .....+-...--.....|+++.+||+.|+.. |.. +.-.=.||+.|+-.+++ .|.++...
T Consensus 80 l-----~-~~~~-~~~~~~~~a~~~~~~~~G~~m~~rr~~L~~~GG~~~--l~~~ladD~~l~~~~~~-~G~~v~~~ 146 (175)
T PF13506_consen 80 L-----E-AAFF-NFLPGVLQALGGAPFAWGGSMAFRREALEEIGGFEA--LADYLADDYALGRRLRA-RGYRVVLS 146 (175)
T ss_pred H-----H-HHHH-hHHHHHHHHhcCCCceecceeeeEHHHHHHcccHHH--HhhhhhHHHHHHHHHHH-CCCeEEEc
Confidence 0 0 0000 0000000000012346788999999999987 433 11123799999999999 79988654
No 113
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=94.14 E-value=0.12 Score=59.27 Aligned_cols=104 Identities=15% Similarity=0.168 Sum_probs=86.8
Q ss_pred CCCcEEEEEEcCCch--hHHHHHHHHHcCCC--CCceEEEEeCCCCChhhHHHHHhhc---CCCceEEEecCCCcc-ccc
Q 046508 174 NRPKVTVILNHFKRK--TLCAQLDSLLQQTL--PFQHVWVLSFGSPNELSLKRIVNSY---NDSRISFISSSYDFK-YYG 245 (932)
Q Consensus 174 ~~~~VtaVVvTYNR~--~L~e~L~aLl~QT~--~~~~IiVvdnaStD~t~t~~~l~~~---~~~~i~~i~~~~N~G-gaG 245 (932)
+-+++++|||-.|-- .|.....+++.-|- -+.+|+.|||-|..+ .+++=|.+| -+..++++++...-| ..+
T Consensus 153 ~Lpt~SVviVFHNEGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdKe-hLkekLDeYv~~fnGlVkV~Rne~REGLI~a 231 (603)
T KOG3737|consen 153 NLPTSSVVIVFHNEGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDKE-HLKEKLDEYVKLFNGLVKVFRNERREGLIQA 231 (603)
T ss_pred cCCcceEEEEEecCccHHHHHHHHHHHhcCcHHhhheEEEeccCCccH-HHHHHHHHHHHHhcCEEEEEecchhhhhhhh
Confidence 567789999988874 48889999888764 388999999999997 477777776 235789999999988 677
Q ss_pred chhhhhhcCCcEEEEEcCCCCCchhHHHHHHhh
Q 046508 246 RFQMALQTEADLVYIVDDDMIPGRKMLQILSHV 278 (932)
Q Consensus 246 gF~~a~~~~~dyVwimDDD~IP~~~~Le~Ll~~ 278 (932)
|=..|+++.++-+.++|--|-...+||--|+.-
T Consensus 232 RSiGA~~atGeV~ifLDAHCEVntNWlpPLlAP 264 (603)
T KOG3737|consen 232 RSIGAQKATGEVLIFLDAHCEVNTNWLPPLLAP 264 (603)
T ss_pred hccchhhccccEEEEEecceeeecccccccccc
Confidence 777788899999999999999999999999743
No 114
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=94.00 E-value=0.38 Score=59.56 Aligned_cols=109 Identities=16% Similarity=0.119 Sum_probs=71.2
Q ss_pred CceeEEEEecCCchhH-HHHHHHHHhccCCCCCccEEEEeCCCCC-----------------HHHHHHHHhcCCCCCCcE
Q 046508 597 MRISVNIVTQNRVHSL-TRLLKSLSNAYYLGDEVPISFNMDSKVD-----------------EATIKLVSTFDWPHGPKT 658 (932)
Q Consensus 597 ~~i~IvIfaynRp~sL-~RLL~SL~~AdY~gd~~~LtI~lD~~~D-----------------~~~~~~l~~f~WP~g~vt 658 (932)
|.++|+|-+||.+..+ +++|+|+.+-+|+.+..++.|--|.+.| ++++++.+.. .+.
T Consensus 131 P~VsViIP~yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~~-----~v~ 205 (713)
T TIGR03030 131 PTVDVFIPTYNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRKL-----GVN 205 (713)
T ss_pred CeeEEEEcCCCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHHc-----CcE
Confidence 5789999999998766 5799999999999766667776565433 3455555543 356
Q ss_pred EEEeccccch-hhhhhhhcccCCCCceEEEEcCCcccChHHHHHHHHHHHHhcCCCC
Q 046508 659 LRRRIIQGGL-IRAVSESWYPASDDDFGLLLEDDIEVSPYFYLWIKYALLAYHYDPQ 714 (932)
Q Consensus 659 lr~Ri~n~GL-ir~VlEsf~P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl~Y~ys~~ 714 (932)
..+|..|.|- ..++ ....-....+++++++.|..+.|.|+.-+ +.....+++
T Consensus 206 yi~r~~n~~~KAgnL-N~al~~a~gd~Il~lDAD~v~~pd~L~~~---v~~f~~dp~ 258 (713)
T TIGR03030 206 YITRPRNVHAKAGNI-NNALKHTDGELILIFDADHVPTRDFLQRT---VGWFVEDPK 258 (713)
T ss_pred EEECCCCCCCChHHH-HHHHHhcCCCEEEEECCCCCcChhHHHHH---HHHHHhCCC
Confidence 5666655432 2221 11111235689999999999999987554 434433554
No 115
>KOG2791 consensus N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=93.89 E-value=0.38 Score=54.38 Aligned_cols=61 Identities=13% Similarity=0.190 Sum_probs=44.5
Q ss_pred ccccCcCCCceeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcC
Q 046508 589 AALPNWNRMRISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFD 651 (932)
Q Consensus 589 ~sL~aWnk~~i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~ 651 (932)
.-...|.+.++-+||.+.|||.-|+=|+.||+++.-..+ .|.|+.-.-.-.++-+++++.+
T Consensus 109 dkfgdla~~~~vlV~qVHnRp~Ylr~lveSlrk~kGI~~--tLlifSHD~~~~eiN~~I~~i~ 169 (455)
T KOG2791|consen 109 DKFGDLAKDRVVLVLQVHNRPQYLRVLVESLRKVKGISE--TLLIFSHDGYFEEINRIIESIK 169 (455)
T ss_pred hhcCccccceEEEEEEEcCcHHHHHHHHHHHHhccCccc--eEEEEeccchHHHHHHHHhhcc
Confidence 344568899999999999999999999999999975543 2555543323356666666654
No 116
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=93.66 E-value=0.8 Score=42.33 Aligned_cols=101 Identities=24% Similarity=0.163 Sum_probs=65.0
Q ss_pred CCceeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhh
Q 046508 596 RMRISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSES 675 (932)
Q Consensus 596 k~~i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEs 675 (932)
.|.+.|+|-+||+...|.++|+|+.+..+.. ..|.|-=|.+.|. +.+.++.+.=....+.......|.|...+.-.+
T Consensus 2 ~~~~siiip~~n~~~~l~~~l~s~~~q~~~~--~eiivvddgs~d~-t~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 78 (291)
T COG0463 2 MPKVSVVIPTYNEEEYLPEALESLLNQTYKD--FEIIVVDDGSTDG-TTEIAIEYGAKDVRVIRLINERNGGLGAARNAG 78 (291)
T ss_pred CccEEEEEeccchhhhHHHHHHHHHhhhhcc--eEEEEEeCCCCCC-hHHHHHHHhhhcceEEEeecccCCChHHHHHhh
Confidence 6889999999999999999999999998764 2355544555553 223443332111345555667788875554333
Q ss_pred cccCCCCceEEEEcCCcccChHHHHH
Q 046508 676 WYPASDDDFGLLLEDDIEVSPYFYLW 701 (932)
Q Consensus 676 f~P~~~~s~vIVLEDDlevSP~Fy~Y 701 (932)
+--. ..++++.++.|.. .|..+..
T Consensus 79 ~~~~-~~~~~~~~d~d~~-~~~~~~~ 102 (291)
T COG0463 79 LEYA-RGDYIVFLDADDQ-HPPELIP 102 (291)
T ss_pred HHhc-cCCEEEEEccCCC-CCHHHHH
Confidence 2212 3378877777777 6666665
No 117
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=93.62 E-value=0.46 Score=56.32 Aligned_cols=183 Identities=16% Similarity=0.217 Sum_probs=117.2
Q ss_pred CcEEEEEEcCCchh-HHHHHHHHHcCCCC-CceEEEEeCC----CCChhhHHHHHhhcCCCceEEEecCCCcccccchhh
Q 046508 176 PKVTVILNHFKRKT-LCAQLDSLLQQTLP-FQHVWVLSFG----SPNELSLKRIVNSYNDSRISFISSSYDFKYYGRFQM 249 (932)
Q Consensus 176 ~~VtaVVvTYNR~~-L~e~L~aLl~QT~~-~~~IiVvdna----StD~t~t~~~l~~~~~~~i~~i~~~~N~GgaGgF~~ 249 (932)
...|+|+.||||-. |+.-+... |.+| +++|+||=|+ .++ +.+..+-..-+++..+.+|- -.-||..
T Consensus 443 qgFTlim~TYdR~d~L~k~v~~y--s~vPsL~kIlVVWNnq~k~PP~-----es~~~~~~VPlr~r~qkeNs-LnNRF~~ 514 (691)
T KOG1022|consen 443 QGFTLIMLTYDRVDLLKKLVKHY--SRVPSLKKILVVWNNQGKNPPP-----ESLEPDIAVPLRFRQQKENS-LNNRFEP 514 (691)
T ss_pred cceeeeeehHHHHHHHHHHHHHH--hhCCCcceEEEEecCCCCCCCh-----hhccccCCccEEEEehhhhh-hhccccc
Confidence 35999999999975 88888777 4554 8889988774 333 34444433446666666553 4668877
Q ss_pred hhhcCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccc-cccCCCCCCCcccccccccccCcCCCCCCCCcc
Q 046508 250 ALQTEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRI-LPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDIT 328 (932)
Q Consensus 250 a~~~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~-vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~~~ 328 (932)
--+..++-|.-+|||.|=..+-|+--.++.- .+-+.+.|+-+|. ++-.+ .+-..|-+ | .-+
T Consensus 515 ~peieT~AVL~IDDDIim~~ddldFgf~VWr--efPD~lVGF~pR~H~~t~s--~~k~~y~s----e----------wt~ 576 (691)
T KOG1022|consen 515 YPEIETEAVLEIDDDIIMPCDDLDFGFEVWR--EFPDRLVGFVPRFHVWTMS--YSKWKYES----E----------WTN 576 (691)
T ss_pred CcccccceeEEecCceeeecchhHHHHHHHH--hCccceeccCcceeecccc--cchhhhee----e----------cCC
Confidence 6667899999999997555888888776643 3335577777776 44211 11111211 0 111
Q ss_pred ccceEEeccccccccccHHHHHHhhccCC---C----cccchhhHHHHHHHHHhcCCCee-eeccCCC
Q 046508 329 VDKIVQVDFLSSSWFLSAELVKTLFIETP---F----TFMTGEDLHLSYQLQKYRNAGSF-VLPVDPN 388 (932)
Q Consensus 329 ~~rl~~~d~l~~~wf~~re~l~~~f~E~~---~----~~~t~eDlhLs~~~~ky~~i~~~-vlp~~p~ 388 (932)
. ..=+|++.=|+.+-++.++-.-.| - .-.++||++++.-.++.-|-|-+ |.|..-.
T Consensus 577 q----ySMVLtGAAFfhk~y~~lYt~~mPa~ir~~vDe~~NCEDIAMNFLiANatg~~aI~Vkp~~~~ 640 (691)
T KOG1022|consen 577 Q----YSMVLTGAAFFHKKYLDLYTSDMPADIRVFVDEHMNCEDIAMNFLIANATGKPAIKVKPRKKF 640 (691)
T ss_pred c----eEEEEechhHHHHHHHHHhhhcccchHHHhhhcccCHHHHHHHHHhhhccCCCceEEeCcccc
Confidence 1 122577888999999998842221 1 23689999998888887777643 3455333
No 118
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=93.32 E-value=0.58 Score=53.72 Aligned_cols=183 Identities=15% Similarity=0.156 Sum_probs=119.7
Q ss_pred CCCcEEEEEEcCCch--hHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHh----hcCCCceEEEecCCCcccccc-
Q 046508 174 NRPKVTVILNHFKRK--TLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVN----SYNDSRISFISSSYDFKYYGR- 246 (932)
Q Consensus 174 ~~~~VtaVVvTYNR~--~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~----~~~~~~i~~i~~~~N~GgaGg- 246 (932)
.-|.|++|-| -++. .|-..|++-+.-.|++.|++.+-+.+.|.. -++++ +|..-..+++--|+..|-+-.
T Consensus 83 ~LPgVSiikP-l~G~d~nl~~Nlesffts~Y~~~ElLfcv~s~eDpA--i~vv~~Ll~kyp~VdAklf~gG~~vg~npKI 159 (431)
T KOG2547|consen 83 KLPGVSIIKP-LKGVDPNLYHNLESFFTSQYHKYELLFCVESSEDPA--IEVVERLLKKYPNVDAKLFFGGEKVGLNPKI 159 (431)
T ss_pred CCCCceEEee-cccCCchhHHhHHHHHhhccCceEEEEEEccCCCcH--HHHHHHHHhhCCCcceEEEEcccccccChhh
Confidence 4458999998 4553 499999999998899999999988888874 45554 566556677777777775542
Q ss_pred -hhh-hhh-cCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccc--cccCC-C---CCCCcccccccccccC
Q 046508 247 -FQM-ALQ-TEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRI--LPFRQ-K---DFTFPSYRKFRSKEAG 317 (932)
Q Consensus 247 -F~~-a~~-~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~--vPf~~-~---d~~f~~y~~~~s~~~g 317 (932)
+.+ |++ +.+|||||.|||---.||.+-.+...-... +..|-+ .|+-. + |.+|+. ..|+--+|-
T Consensus 160 nN~mpgy~~a~ydlvlisDsgI~m~pdtildm~t~M~sh-------ekmalvtq~py~~dr~Gf~atle~-~~fgTsh~r 231 (431)
T KOG2547|consen 160 NNMMPGYRAAKYDLVLISDSGIFMKPDTILDMATTMMSH-------EKMALVTQTPYCKDRQGFDATLEQ-VYFGTSHPR 231 (431)
T ss_pred hccCHHHHHhcCCEEEEecCCeeecCchHHHHHHhhhcc-------cceeeecCCceeeccccchhhhhh-eeeccCCce
Confidence 222 555 689999999999877778777665332110 122222 45421 2 335555 123322344
Q ss_pred cCCCCCCCCccccceEEeccccccccccHHHHHHhhccCCCcccchhhHHHHHHHHH
Q 046508 318 LYLPDPAYDITVDKIVQVDFLSSSWFLSAELVKTLFIETPFTFMTGEDLHLSYQLQK 374 (932)
Q Consensus 318 ~~~p~~~y~~~~~rl~~~d~l~~~wf~~re~l~~~f~E~~~~~~t~eDlhLs~~~~k 374 (932)
.|+|.+ -+-+.++-+-++.+||+.+...=.-..+.|.=.||+-....+..
T Consensus 232 ~yl~~n-------~~~~~c~tgms~~mrK~~ld~~ggi~~f~~yLaedyFaaksllS 281 (431)
T KOG2547|consen 232 IYLSGN-------VLGFNCSTGMSSMMRKEALDECGGISAFGGYLAEDYFAAKSLLS 281 (431)
T ss_pred EEEccc-------cccccccccHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHh
Confidence 466622 34556666777889999887764445667777889888666666
No 119
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=93.16 E-value=0.75 Score=47.15 Aligned_cols=103 Identities=15% Similarity=0.126 Sum_probs=62.4
Q ss_pred EEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcC--CCCCCcEEEEe----ccccchhhhhhh
Q 046508 601 VNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFD--WPHGPKTLRRR----IIQGGLIRAVSE 674 (932)
Q Consensus 601 IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~--WP~g~vtlr~R----i~n~GLir~VlE 674 (932)
|+|-+||+...|.++|+||.+-.|.. ...|.|-=|.+.|. +.++++.|. =+...+++.++ ..+.|...+.-.
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~~~-~~eiiVvDd~S~d~-t~~i~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~a~N~ 78 (219)
T cd06913 1 IILPVHNGEQWLDECLESVLQQDFEG-TLELSVFNDASTDK-SAEIIEKWRKKLEDSGVIVLVGSHNSPSPKGVGYAKNQ 78 (219)
T ss_pred CEEeecCcHHHHHHHHHHHHhCCCCC-CEEEEEEeCCCCcc-HHHHHHHHHHhCcccCeEEEEecccCCCCccHHHHHHH
Confidence 57889999999999999998877652 34566654555442 233444331 12223443332 234565332211
Q ss_pred hcccCCCCceEEEEcCCcccChHHHHHHHHHH
Q 046508 675 SWYPASDDDFGLLLEDDIEVSPYFYLWIKYAL 706 (932)
Q Consensus 675 sf~P~~~~s~vIVLEDDlevSP~Fy~Ylk~AL 706 (932)
+ ......+++++|++|..+.|.++.-+-.++
T Consensus 79 g-~~~a~gd~i~~lD~D~~~~~~~l~~~~~~~ 109 (219)
T cd06913 79 A-IAQSSGRYLCFLDSDDVMMPQRIRLQYEAA 109 (219)
T ss_pred H-HHhcCCCEEEEECCCccCChhHHHHHHHHH
Confidence 2 123356899999999999998876544444
No 120
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=93.06 E-value=0.74 Score=49.56 Aligned_cols=141 Identities=21% Similarity=0.270 Sum_probs=92.6
Q ss_pred cEEEEEEcCCchh-HHHHH---HHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCCcc--cccchhhh
Q 046508 177 KVTVILNHFKRKT-LCAQL---DSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYDFK--YYGRFQMA 250 (932)
Q Consensus 177 ~VtaVVvTYNR~~-L~e~L---~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N~G--gaGgF~~a 250 (932)
+|++|||-.||.. |+.-| ...|+...-.+.|+||+-.-.. ..|.| .+-||..|
T Consensus 3 ~~aiivpyr~R~~~l~~~l~~~~~~L~rq~~~~~i~vi~Q~~~~---------------------~FNR~~llNvG~~~a 61 (219)
T cd00899 3 KVAIIVPFRNRFEHLLIFLPHLHPFLQRQQLDYRIFVIEQVGNF---------------------RFNRAKLLNVGFLEA 61 (219)
T ss_pred ceEEEEecCCHHHHHHHHHHHHHHHHHhcCCcEEEEEEEecCCc---------------------cchhhhhhhHHHHHH
Confidence 7999999999964 66664 4444433346678888744221 12333 57788888
Q ss_pred hhc-CCcEEEEEcCCCCCchhHHHHHHhhcccccccccccccccc--c-cccCCCCCCCcccccccccccCcCCCCCCCC
Q 046508 251 LQT-EADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGR--I-LPFRQKDFTFPSYRKFRSKEAGLYLPDPAYD 326 (932)
Q Consensus 251 ~~~-~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~--~-vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~ 326 (932)
.+. ++|++.+=|=|.||..+.+..-+ ..|. + +++. .| . -.+| |
T Consensus 62 ~k~~~~dc~i~hDVDllP~~~~~~y~~--------------~~~p~H~s~~~~----~~------~-----~~lp---y- 108 (219)
T cd00899 62 LKDGDWDCFIFHDVDLLPENDRNLYGC--------------EEGPRHLSVPLD----KF------H-----YKLP---Y- 108 (219)
T ss_pred hhcCCccEEEEecccccccCccccccC--------------CCCCeEEEEeec----cc------c-----cccC---c-
Confidence 774 49999999999999999855332 1111 1 1221 01 0 0134 2
Q ss_pred ccccceEEeccccccccccHHHHHHh--hccCCCcccchhhHHHHHHHHHhcCCCee
Q 046508 327 ITVDKIVQVDFLSSSWFLSAELVKTL--FIETPFTFMTGEDLHLSYQLQKYRNAGSF 381 (932)
Q Consensus 327 ~~~~rl~~~d~l~~~wf~~re~l~~~--f~E~~~~~~t~eDlhLs~~~~ky~~i~~~ 381 (932)
-.+.|+++.+.|+.+... |.|.=..|- +||-.|+..+.. +|+...
T Consensus 109 --------~~~~Gg~~~~~k~~f~~VNGf~n~f~GWG-gEDdd~~~Rl~~-~g~~~~ 155 (219)
T cd00899 109 --------KTYFGGVLALTREQFRKVNGFSNAYWGWG-GEDDDLYNRIKA-AGLKIT 155 (219)
T ss_pred --------ccccccceeeEHHHHHHhCCcCCcCccCC-cchHHHHHHHHH-CCCeEE
Confidence 246889999999999999 999866775 466677778887 787764
No 121
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=92.98 E-value=1.1 Score=50.36 Aligned_cols=113 Identities=19% Similarity=0.127 Sum_probs=77.2
Q ss_pred CCceeEEEEecCCchhHHHHHHHHHhccC------CCCCccEEEEeCCCCCHHHHHHHHhcC--C--CCCCcEEEEeccc
Q 046508 596 RMRISVNIVTQNRVHSLTRLLKSLSNAYY------LGDEVPISFNMDSKVDEATIKLVSTFD--W--PHGPKTLRRRIIQ 665 (932)
Q Consensus 596 k~~i~IvIfaynRp~sL~RLL~SL~~AdY------~gd~~~LtI~lD~~~D~~~~~~l~~f~--W--P~g~vtlr~Ri~n 665 (932)
.+.|.|+|-+||..+.+.++|+++.+... ......+.|--|.+.|. +.++++.+. . |...+.+.+...|
T Consensus 69 ~~~isVVIP~yNe~~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~-T~~i~~~~~~~~~~~~~~i~vi~~~~N 147 (333)
T PTZ00260 69 DVDLSIVIPAYNEEDRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDK-TLKVAKDFWRQNINPNIDIRLLSLLRN 147 (333)
T ss_pred CeEEEEEEeeCCCHHHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCc-hHHHHHHHHHhcCCCCCcEEEEEcCCC
Confidence 56789999999999999999999876422 11123466655666552 233333321 1 2235777788889
Q ss_pred cchhhhhhhhcccCCCCceEEEEcCCcccChHHHHHHHHHHHHhc
Q 046508 666 GGLIRAVSESWYPASDDDFGLLLEDDIEVSPYFYLWIKYALLAYH 710 (932)
Q Consensus 666 ~GLir~VlEsf~P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl~Y~ 710 (932)
.|...++-.++- ....+++++++.|....|..+.-+-..+....
T Consensus 148 ~G~~~A~~~Gi~-~a~gd~I~~~DaD~~~~~~~l~~l~~~l~~~~ 191 (333)
T PTZ00260 148 KGKGGAVRIGML-ASRGKYILMVDADGATDIDDFDKLEDIMLKIE 191 (333)
T ss_pred CChHHHHHHHHH-HccCCEEEEEeCCCCCCHHHHHHHHHHHHHhh
Confidence 998666544433 23568999999999999999888877776543
No 122
>PF01762 Galactosyl_T: Galactosyltransferase; InterPro: IPR002659 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 31 (GH31 from CAZY) comprises enzymes with a number of known activities; N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase (2.4.1.149 from EC); beta-1,3-galactosyltransferase (2.4.1 from EC); fucose-specific beta-1,3-N-acetylglucosaminyltransferase (2.4.1 from EC); globotriosylceramide beta-1,3-GalNAc transferase (2.4.1.79 from EC) [, ].; GO: 0008378 galactosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane
Probab=92.75 E-value=0.81 Score=47.17 Aligned_cols=123 Identities=23% Similarity=0.265 Sum_probs=68.9
Q ss_pred ccchhhhhh--cCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccc--cCcC
Q 046508 244 YGRFQMALQ--TEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKE--AGLY 319 (932)
Q Consensus 244 aGgF~~a~~--~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~--~g~~ 319 (932)
-.+|.-+.+ ...+||..+|||+...++.|...++..-.+...+.+.|..-+..|. .++.+..-| -+.+ +..+
T Consensus 68 ~~~~~w~~~~c~~~~~v~k~DDD~~vn~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~-~r~~~~kw~---v~~~~y~~~~ 143 (195)
T PF01762_consen 68 LAGLKWASKHCPNAKYVLKVDDDVFVNPDRLVSFLKSLKQDPSKNSIYGGCIKNGPP-IRDPSSKWY---VSEEEYPDDY 143 (195)
T ss_pred HHHHHHHHhhCCchhheeecCcEEEEehHHhhhhhhhcccCccccccccccccCCcc-ccccccCce---eeeeeccccc
Confidence 344444433 2489999999999999999999987651122233333433332221 122111111 0000 1111
Q ss_pred CCCCCCCccccceEEeccccccccccHHHHHHhhcc-CCCcccchhhHHHHHHHHHhcCCCeeeec
Q 046508 320 LPDPAYDITVDKIVQVDFLSSSWFLSAELVKTLFIE-TPFTFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 320 ~p~~~y~~~~~rl~~~d~l~~~wf~~re~l~~~f~E-~~~~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
.| .. .-|+..++++++++.+... .....-..||..+.+-+.+ +||+-+.+|
T Consensus 144 yP-----------~y--~~G~~yvls~~~v~~i~~~~~~~~~~~~eDv~iGi~~~~-~~i~~~~~~ 195 (195)
T PF01762_consen 144 YP-----------PY--CSGGGYVLSSDVVKRIYKASSHTPFFPLEDVFIGILAEK-LGIKPIHDP 195 (195)
T ss_pred CC-----------Cc--CCCCeEEecHHHHHHHHHHhhcCCCCCchHHHHHHHHHH-CCCCccCCC
Confidence 12 11 1368899999999999644 2112223799999777777 888765443
No 123
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=92.74 E-value=0.94 Score=56.11 Aligned_cols=109 Identities=16% Similarity=0.120 Sum_probs=74.2
Q ss_pred CCceeEEEEecCCc-----hhHHHHHHHHHhccCCCCCccEEEEeCCCCCHH--------HHHHHHhcCCCCCCcEEEEe
Q 046508 596 RMRISVNIVTQNRV-----HSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEA--------TIKLVSTFDWPHGPKTLRRR 662 (932)
Q Consensus 596 k~~i~IvIfaynRp-----~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~--------~~~~l~~f~WP~g~vtlr~R 662 (932)
.+++.|+|=+||-. +.++.+++||.+.+|.+ ..+++|--|.. |++ ..++.+.+. +.+++.+|+|
T Consensus 123 ~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~~~-~~e~~vLdD~~-d~~~~~~e~~~~~~L~~~~~-~~~~i~yr~R 199 (691)
T PRK05454 123 EARTAILMPIYNEDPARVFAGLRAMYESLAATGHGA-HFDFFILSDTR-DPDIAAAEEAAWLELRAELG-GEGRIFYRRR 199 (691)
T ss_pred CCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCCCC-CEEEEEEECCC-ChhHHHHHHHHHHHHHHhcC-CCCcEEEEEC
Confidence 46788888899865 46889999999988753 45565544544 332 224445542 3457889999
Q ss_pred ccccchhhhhhhhcccC--CCCceEEEEcCCcccChHHHHHHHHHHH
Q 046508 663 IIQGGLIRAVSESWYPA--SDDDFGLLLEDDIEVSPYFYLWIKYALL 707 (932)
Q Consensus 663 i~n~GLir~VlEsf~P~--~~~s~vIVLEDDlevSP~Fy~Ylk~ALl 707 (932)
..|.|--++-++.|... ..++|++||+-|..++|.|+.-+-..+.
T Consensus 200 ~~n~~~KaGNl~~~~~~~~~~~eyivvLDADs~m~~d~L~~lv~~m~ 246 (691)
T PRK05454 200 RRNVGRKAGNIADFCRRWGGAYDYMVVLDADSLMSGDTLVRLVRLME 246 (691)
T ss_pred CcCCCccHHHHHHHHHhcCCCcCEEEEEcCCCCCCHHHHHHHHHHHh
Confidence 98887533323333332 3579999999999999999877766554
No 124
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=92.63 E-value=1.2 Score=48.32 Aligned_cols=104 Identities=14% Similarity=0.118 Sum_probs=68.7
Q ss_pred eEEEEecCCchh-HHHHHHHHHh----ccCCCCCccEEEEeCCCCCHHHH--------HHHHhcCCCC-CCcEEEEeccc
Q 046508 600 SVNIVTQNRVHS-LTRLLKSLSN----AYYLGDEVPISFNMDSKVDEATI--------KLVSTFDWPH-GPKTLRRRIIQ 665 (932)
Q Consensus 600 ~IvIfaynRp~s-L~RLL~SL~~----AdY~gd~~~LtI~lD~~~D~~~~--------~~l~~f~WP~-g~vtlr~Ri~n 665 (932)
.|+|=+||-+.. |...|+|..+ .+|.. ...+ +-+|-..|+++. ++.+.+ |. -++.+.+|..|
T Consensus 2 SIliP~~ne~~~~l~~~l~~~~~~~~~~~~~~-~~eI-~vldD~~d~~~~~~~~~~~~~l~~~~--~~~~~v~~~~r~~~ 77 (254)
T cd04191 2 AIVMPVYNEDPARVFAGLRAMYESLAKTGLAD-HFDF-FILSDTRDPDIWLAEEAAWLDLCEEL--GAQGRIYYRRRREN 77 (254)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHHHhcCCcC-ceEE-EEECCCCChHHHHHHHHHHHHHHHHh--CCCCcEEEEEcCCC
Confidence 566667877655 7777777665 34422 2445 335655565432 244444 43 35778899999
Q ss_pred cchhhhhhhhcccC--CCCceEEEEcCCcccChHHHHHHHHHHH
Q 046508 666 GGLIRAVSESWYPA--SDDDFGLLLEDDIEVSPYFYLWIKYALL 707 (932)
Q Consensus 666 ~GLir~VlEsf~P~--~~~s~vIVLEDDlevSP~Fy~Ylk~ALl 707 (932)
.|.-.+.+..+... ..++|+++++-|..+.|.|+..+-..+.
T Consensus 78 ~g~Kag~l~~~~~~~~~~~~~i~~~DaD~~~~p~~l~~~v~~~~ 121 (254)
T cd04191 78 TGRKAGNIADFCRRWGSRYDYMVVLDADSLMSGDTIVRLVRRME 121 (254)
T ss_pred CCccHHHHHHHHHHhCCCCCEEEEEeCCCCCCHHHHHHHHHHHH
Confidence 99855445555543 3569999999999999999988776664
No 125
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=91.37 E-value=0.95 Score=47.97 Aligned_cols=100 Identities=21% Similarity=0.255 Sum_probs=65.7
Q ss_pred EEEEecCCc-hhHHHHHHHHHhccCC--------CCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccch-hh
Q 046508 601 VNIVTQNRV-HSLTRLLKSLSNAYYL--------GDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGL-IR 670 (932)
Q Consensus 601 IvIfaynRp-~sL~RLL~SL~~AdY~--------gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GL-ir 670 (932)
|+|=+||-. ..+.++|+||.+.+|. .+...+.|-.|...| .+ .| + + ...++ ++
T Consensus 1 v~ip~yNE~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dgs~d-------~~----~g-k----~-~~~~~~~~ 63 (244)
T cd04190 1 VCVTMYNEDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDGAIK-------KN----RG-K----R-DSQLWFFN 63 (244)
T ss_pred CEEeeecCCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCCccc-------cc----Cc-c----h-HHHHHHHH
Confidence 467789996 7899999999999998 455667777787766 00 01 0 0 00010 11
Q ss_pred hhhhhcccCCCCceEEEEcCCcccChHHHHHHHHHHHHhcCCCCCCCCCeeeEEee
Q 046508 671 AVSESWYPASDDDFGLLLEDDIEVSPYFYLWIKYALLAYHYDPQISLPELSSISLY 726 (932)
Q Consensus 671 ~VlEsf~P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl~Y~ys~~v~~~~L~GISLy 726 (932)
++.++ ......+++++++.|..+.|.++..+...+.. ++++ .++++.
T Consensus 64 ~~~~~-~~~a~~e~i~~~DaD~~~~~~~l~~l~~~~~~---~p~v-----g~v~g~ 110 (244)
T cd04190 64 YFCRV-LFPDDPEFILLVDADTKFDPDSIVQLYKAMDK---DPEI-----GGVCGE 110 (244)
T ss_pred HHHHH-hhcCCCCEEEEECCCCcCCHhHHHHHHHHHHh---CCCE-----EEEEee
Confidence 22121 11225699999999999999999888877753 4444 667664
No 126
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=91.28 E-value=1.4 Score=49.20 Aligned_cols=113 Identities=16% Similarity=0.082 Sum_probs=70.7
Q ss_pred CcCCCceeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCC--CCCcEEEEeccccchhh
Q 046508 593 NWNRMRISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWP--HGPKTLRRRIIQGGLIR 670 (932)
Q Consensus 593 aWnk~~i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP--~g~vtlr~Ri~n~GLir 670 (932)
.+..+++.|+|-+||..+.+.++|+||.+..+......+.|-=|.+.| .+.++++.+.-. .....+.....|.|...
T Consensus 27 ~~~~~~vSVVIPayNee~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD-~T~~ia~~~~~~v~~~~~~~~~~~~n~Gkg~ 105 (306)
T PRK13915 27 AKAGRTVSVVLPALNEEETVGKVVDSIRPLLMEPLVDELIVIDSGSTD-ATAERAAAAGARVVSREEILPELPPRPGKGE 105 (306)
T ss_pred ccCCCCEEEEEecCCcHHHHHHHHHHHHHHhccCCCcEEEEEeCCCcc-HHHHHHHHhcchhhcchhhhhccccCCCHHH
Confidence 447889999999999999999999999986432112245553344444 556677665210 00111112245777755
Q ss_pred hhhhhcccCCCCceEEEEcCCcc-cChHHHHHHHHHHH
Q 046508 671 AVSESWYPASDDDFGLLLEDDIE-VSPYFYLWIKYALL 707 (932)
Q Consensus 671 ~VlEsf~P~~~~s~vIVLEDDle-vSP~Fy~Ylk~ALl 707 (932)
++-.++- ....+++++++.|.. ..|.++.=+-..+.
T Consensus 106 A~~~g~~-~a~gd~vv~lDaD~~~~~p~~l~~l~~~l~ 142 (306)
T PRK13915 106 ALWRSLA-ATTGDIVVFVDADLINFDPMFVPGLLGPLL 142 (306)
T ss_pred HHHHHHH-hcCCCEEEEEeCccccCCHHHHHHHHHHHH
Confidence 5434432 235689999999996 89988655444443
No 127
>PF09258 Glyco_transf_64: Glycosyl transferase family 64 domain; InterPro: IPR015338 Members of this entry catalyse the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analogue of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate []. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0031227 intrinsic to endoplasmic reticulum membrane; PDB: 1ON6_B 1OMZ_B 1OMX_B 1ON8_B.
Probab=90.13 E-value=0.66 Score=50.43 Aligned_cols=97 Identities=21% Similarity=0.234 Sum_probs=55.2
Q ss_pred eeEEEEe-cCCchhHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhhcc
Q 046508 599 ISVNIVT-QNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSESWY 677 (932)
Q Consensus 599 i~IvIfa-ynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEsf~ 677 (932)
+.|+|.+ ++|++.|.++|++|++..+.. ++ +.+.-. ...+... ..||...+.|+-+... ..++.+-|.
T Consensus 1 fTvvi~t~~~R~~~L~~~l~~l~~~~~l~-~I-vVvWn~-~~~~P~~-----~~~~~~~vpV~~~~~~---~nsLnnRF~ 69 (247)
T PF09258_consen 1 FTVVINTSYKRSDLLKRLLRHLASSPSLR-KI-VVVWNN-PNPPPPS-----SKWPSTGVPVRVVRSS---RNSLNNRFL 69 (247)
T ss_dssp EEEEEEE-SS-HHHHHHHHHHHTTSTTEE-EE-EEEEE--TS--THH-----HHHT---S-EEEEEES---SHHGGGGGS
T ss_pred CEEEEEecccchHHHHHHHHHHHcCCCCC-eE-EEEeCC-CCCCCcc-----cccCCCCceEEEEecC---CccHHhcCc
Confidence 4578889 999999999999997776543 22 444444 2222111 2366544555444333 223457788
Q ss_pred cCC--CCceEEEEcCCcccChHHHHHHHHHH
Q 046508 678 PAS--DDDFGLLLEDDIEVSPYFYLWIKYAL 706 (932)
Q Consensus 678 P~~--~~s~vIVLEDDlevSP~Fy~Ylk~AL 706 (932)
|.. ..+.|+.++||+.+++.=+.|.-.+-
T Consensus 70 p~~~i~T~AVl~~DDDv~~~~~~l~faF~~W 100 (247)
T PF09258_consen 70 PDPEIETDAVLSLDDDVMLSCDELEFAFQVW 100 (247)
T ss_dssp --TT--SSEEEEEETTEEE-HHHHHHHHHHH
T ss_pred CccccCcceEEEecCCcccCHHHHHHHHHHH
Confidence 865 34779999999999998776654433
No 128
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=90.06 E-value=2.7 Score=47.13 Aligned_cols=109 Identities=19% Similarity=0.150 Sum_probs=71.5
Q ss_pred CceeEEEEecCCchhHHHHHHHHHhccC-CCCCccEEEEeCCCCCHHHHHHHHhcC-CCCCCcEEEEeccccchhhhhhh
Q 046508 597 MRISVNIVTQNRVHSLTRLLKSLSNAYY-LGDEVPISFNMDSKVDEATIKLVSTFD-WPHGPKTLRRRIIQGGLIRAVSE 674 (932)
Q Consensus 597 ~~i~IvIfaynRp~sL~RLL~SL~~AdY-~gd~~~LtI~lD~~~D~~~~~~l~~f~-WP~g~vtlr~Ri~n~GLir~VlE 674 (932)
+++.|+|-+||..+++.+++++|.++-- ......+.|--|.+.| .+.+.++.+. =+..++.+.....|.|...++..
T Consensus 6 ~~vSVVIP~yNE~~~i~~~l~~l~~~~~~~~~~~EIIvVDDgS~D-~T~~il~~~~~~~~~~v~~i~~~~n~G~~~A~~~ 84 (325)
T PRK10714 6 KKVSVVIPVYNEQESLPELIRRTTAACESLGKEYEILLIDDGSSD-NSAEMLVEAAQAPDSHIVAILLNRNYGQHSAIMA 84 (325)
T ss_pred CeEEEEEcccCchhhHHHHHHHHHHHHHhCCCCEEEEEEeCCCCC-cHHHHHHHHHhhcCCcEEEEEeCCCCCHHHHHHH
Confidence 4588999999999999999999876421 1223345554455555 3334444321 01234444455678887666544
Q ss_pred hcccCCCCceEEEEcCCcccChHHHHHHHHHHH
Q 046508 675 SWYPASDDDFGLLLEDDIEVSPYFYLWIKYALL 707 (932)
Q Consensus 675 sf~P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl 707 (932)
++- ....++++++++|.+..|..+.-+-.++.
T Consensus 85 G~~-~A~gd~vv~~DaD~q~~p~~i~~l~~~~~ 116 (325)
T PRK10714 85 GFS-HVTGDLIITLDADLQNPPEEIPRLVAKAD 116 (325)
T ss_pred HHH-hCCCCEEEEECCCCCCCHHHHHHHHHHHH
Confidence 432 23568999999999999999988877774
No 129
>PLN02893 Cellulose synthase-like protein
Probab=90.04 E-value=1.3 Score=54.89 Aligned_cols=153 Identities=18% Similarity=0.200 Sum_probs=87.6
Q ss_pred CCceEEEecCCCcc-----cccchhhh-----hhcCCcEEEEEcCCCCC-chhHHHHHHhhccccccccccccccccccc
Q 046508 229 DSRISFISSSYDFK-----YYGRFQMA-----LQTEADLVYIVDDDMIP-GRKMLQILSHVAGTEKYKNSVLGSIGRILP 297 (932)
Q Consensus 229 ~~~i~~i~~~~N~G-----gaGgF~~a-----~~~~~dyVwimDDD~IP-~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vP 297 (932)
.+.+.|+.-+++-| =||.-+.+ .+++++||.++|=|++| .|+.|.+.|=-.- |.-.+. ..|- |=
T Consensus 263 lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~l~~amcff~-Dp~~~~---~vaf-VQ 337 (734)
T PLN02893 263 MPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTPLRALCYLL-DPSMDP---KLGY-VQ 337 (734)
T ss_pred CCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCchhHHHHHHHHhc-CCCcCC---ceEE-Ee
Confidence 47899999988743 25544443 34689999999999985 7888888762211 111010 1111 33
Q ss_pred cCCCCCCCcccccccccccCcCCCC---CCCC---ccccceEEeccccccccccHHHHHHhhc-----------------
Q 046508 298 FRQKDFTFPSYRKFRSKEAGLYLPD---PAYD---ITVDKIVQVDFLSSSWFLSAELVKTLFI----------------- 354 (932)
Q Consensus 298 f~~~d~~f~~y~~~~s~~~g~~~p~---~~y~---~~~~rl~~~d~l~~~wf~~re~l~~~f~----------------- 354 (932)
|+|+ |..- .++|..+. .-|+ ...+.+.-.-++|++||+||+.|.-...
T Consensus 338 fPQ~---F~~i------~~~D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~~~~~~~~~~~~~~~~~ 408 (734)
T PLN02893 338 FPQI---FHGI------NKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSSLILPEIPELNPDHLVD 408 (734)
T ss_pred Cccc---ccCC------CcCCCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcCCCccccchhhhhcccccccc
Confidence 3343 1111 11110000 0001 1334556677899999999999942111
Q ss_pred --------------------c------CCCcccc---hhhHHHHHHHHHhcCCCeeeeccCCCCCCCcccccc
Q 046508 355 --------------------E------TPFTFMT---GEDLHLSYQLQKYRNAGSFVLPVDPNDKATWGDSEH 398 (932)
Q Consensus 355 --------------------E------~~~~~~t---~eDlhLs~~~~ky~~i~~~vlp~~p~~~~~wg~~~~ 398 (932)
| +...|.+ .||++.++.|+. +|.++..+ +|.+.+.-|.+-.
T Consensus 409 ~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh~-~GWrSvY~--~p~~~af~G~aP~ 478 (734)
T PLN02893 409 KSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQC-EGWKSIFC--NPKRPAFLGDSPI 478 (734)
T ss_pred cccchHHHHHHhhhccccccccCCccccccceEeccccccHHHHHHHHh-cCCcEEec--CCCchhhccCCCC
Confidence 1 0123332 689999999999 99999765 3455555555543
No 130
>PF04666 Glyco_transf_54: N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region; InterPro: IPR006759 The complex-type of oligosaccharides are synthesised through elongation by glycosyltransferases after trimming of the precursor oligosaccharides transferred to proteins in the endoplasmic reticulum. N-Acetylglucosaminyltransferases (GnTs) take part in the formation of branches in the biosynthesis of complex-type sugar chains. In vertebrates, six GnTs, designated as GnT-I to -VI, which catalyse the transfer of GlcNAc to the core mannose residues of Asn-linked sugar chains, have been identified. GnT-IV (2.4.1.145 from EC) catalyzes the transfer of GlcNAc from UDP-GlcNAc to the GlcNAc1-2Man1-3 arm of core oligosaccharide [Gn2(22)core oligosaccharide] and forms a GlcNAc1-4(GlcNAc1-2)Man1-3 structure on the core oligosaccharide (Gn3(2,4,2)core oligosaccharide). In some members the conserved region occupies all but the very N-terminal, where there is a signal sequence on all members. For other members the conserved region does not occupy the entire protein but is still to the N-terminal end of the protein [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane
Probab=88.71 E-value=2.4 Score=47.69 Aligned_cols=142 Identities=22% Similarity=0.254 Sum_probs=89.2
Q ss_pred CcccHHHHHccccccccCCC-CCCcEEEEEEcCCch---hHHHHHHHHHcCCCC--C-ceEEEEeCCCCChhhHHHHHhh
Q 046508 154 GTETLNELMAMKSKWDLKGP-NRPKVTVILNHFKRK---TLCAQLDSLLQQTLP--F-QHVWVLSFGSPNELSLKRIVNS 226 (932)
Q Consensus 154 ~~~~~~~~~~~~s~~~~~~~-~~~~VtaVVvTYNR~---~L~e~L~aLl~QT~~--~-~~IiVvdnaStD~t~t~~~l~~ 226 (932)
.+|+++..-++........+ ...++++=|||-+|+ +|...|.+|+....+ . +=+|||=-|-+|.+....+.+.
T Consensus 29 l~Hl~~~~~~l~p~~~~g~~~~~~~L~IGIpTV~R~~~sYL~~TL~SLl~~ls~~Er~~i~IvVllAd~Dp~~~~~~~~~ 108 (297)
T PF04666_consen 29 LPHLLDKLSSLSPALLAGKPRTGKKLCIGIPTVKREKESYLLDTLASLLDGLSPEERKDIVIVVLLADTDPDYHPSVAQN 108 (297)
T ss_pred ccccccchhccCcceEcCCCCCCCeEEEEecccccCCCchHHHHHHHHHHhCCHHHhcCeEEEEEecCCChhhhHHHHHH
Confidence 56667766677666665444 666799999999996 499999999988664 2 2345665666665433333332
Q ss_pred ----c----CCCceEEEecCCC-----------ccc---ccch----------hhh-hhcCCcEEEEEcCCCCCchhHHH
Q 046508 227 ----Y----NDSRISFISSSYD-----------FKY---YGRF----------QMA-LQTEADLVYIVDDDMIPGRKMLQ 273 (932)
Q Consensus 227 ----~----~~~~i~~i~~~~N-----------~Gg---aGgF----------~~a-~~~~~dyVwimDDD~IP~~~~Le 273 (932)
+ ....+.+|..+.+ +|- -+++ .+. ++..++|...|.||.+..++++.
T Consensus 109 i~~~f~~~i~sG~l~VI~~p~~~Yp~l~~l~~~~~d~~~rv~wrsKq~lDya~Lm~y~~~~~~YyL~LEDDVia~~~f~~ 188 (297)
T PF04666_consen 109 ISTRFADHIESGLLEVISPPPSYYPDLDNLKRNFGDSEERVRWRSKQNLDYAFLMNYCQNLGDYYLQLEDDVIAAPGFLS 188 (297)
T ss_pred HHHHhHHHHHhCceEEEecccccCCChhhhhhcccChhhhhhHHHhhcccHHHHHHHHHhcCCeEEEecCCeEechhHHH
Confidence 1 3346666665533 221 0111 111 23468999999999999999999
Q ss_pred HHHhhccccccc------cccccccccc
Q 046508 274 ILSHVAGTEKYK------NSVLGSIGRI 295 (932)
Q Consensus 274 ~Ll~~~g~~~~~------~~vlgs~G~~ 295 (932)
.+.+.....+.. =+.+|.+|.+
T Consensus 189 ~i~~~v~~~~~~~W~~LeFs~lG~iGKl 216 (297)
T PF04666_consen 189 RIKRFVEAWESKDWLYLEFSQLGFIGKL 216 (297)
T ss_pred HHHHHHHHhcCCCceEEEeecCcchhhe
Confidence 988775432221 1245666665
No 131
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]
Probab=87.65 E-value=4.4 Score=48.70 Aligned_cols=183 Identities=17% Similarity=0.225 Sum_probs=113.1
Q ss_pred cEEEEEEcCCchh-HHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCC--CceEEEecCCCcccccchhhhhhc
Q 046508 177 KVTVILNHFKRKT-LCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYND--SRISFISSSYDFKYYGRFQMALQT 253 (932)
Q Consensus 177 ~VtaVVvTYNR~~-L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~--~~i~~i~~~~N~GgaGgF~~a~~~ 253 (932)
..|+|+-||-|.. |...|+-| .|--.+++|+||=|...|-. .++. ..+ --|.+++..+|- -+-||.-|-.-
T Consensus 650 QFTvVmLTYERe~VLm~sLeRL-~gLPYLnKvvVVWNspk~P~--ddl~--WPdigvPv~viR~~~Ns-LNNRFlPwd~I 723 (907)
T KOG2264|consen 650 QFTVVMLTYEREAVLMGSLERL-HGLPYLNKVVVVWNSPKDPP--DDLT--WPDIGVPVEVIRVAENS-LNNRFLPWDRI 723 (907)
T ss_pred eEEEEEEEehHHHHHHHHHHHh-hCCcccceEEEEeCCCCCCh--hccc--CcCCCCceEEEEccccc-ccccccCchhh
Confidence 4999999999987 99999887 44434888999988876642 2222 222 247788877764 57799999778
Q ss_pred CCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcCCCCCCCCccccceE
Q 046508 254 EADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIV 333 (932)
Q Consensus 254 ~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~~~~~rl~ 333 (932)
.++-|.=+|||.-=..+- . ..|.-.+++ ..-|+|.|+.+ |-.|+- |.+-|= ||-| --.
T Consensus 724 ETEAvLS~DDDahLrhdE---I--~fgFRVWRE----~RDRiVGFPgR------yHAwd~--p~~sw~---YNSN--ysC 781 (907)
T KOG2264|consen 724 ETEAVLSLDDDAHLRHDE---I--IFGFRVWRE----NRDRIVGFPGR------YHAWDG--PHDSWF---YNSN--YSC 781 (907)
T ss_pred hheeeeecccchhhhhhh---e--eeeeehhhh----cccccccCCcc------cccccC--CCccee---ecCC--cce
Confidence 899999999996322221 1 123233343 35666777643 444433 111111 3322 223
Q ss_pred Ee-ccccccccccHHHHHHhh-------ccCCCcccchhhHHH----HHHHHHhcCCCe-----eeeccCCC
Q 046508 334 QV-DFLSSSWFLSAELVKTLF-------IETPFTFMTGEDLHL----SYQLQKYRNAGS-----FVLPVDPN 388 (932)
Q Consensus 334 ~~-d~l~~~wf~~re~l~~~f-------~E~~~~~~t~eDlhL----s~~~~ky~~i~~-----~vlp~~p~ 388 (932)
+. =++++.=|+++--+-++- +++.=...++||++. ||.-|| --|.+ |.||-||.
T Consensus 782 elSMvLTGAAF~HKyYlylYtY~mPqaIRd~Vdey~NCEDIAMNfLVSHiTRK-PPiKvTSRWTfrCPgCp~ 852 (907)
T KOG2264|consen 782 ELSMVLTGAAFIHKYYLYLYTYEMPQAIRDHVDEYKNCEDIAMNFLVSHITRK-PPIKVTSRWTFRCPGCPE 852 (907)
T ss_pred EEeeeehhhHHHHHHHHHhhhhhchHHHHHHHHhhcCHHHHHHHHHHHHhccC-CCceeeceeEEeCCCCch
Confidence 33 357888899999887773 344556678999876 444455 33332 44566664
No 132
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=87.51 E-value=3.4 Score=49.56 Aligned_cols=109 Identities=16% Similarity=0.190 Sum_probs=65.1
Q ss_pred ccCcCCCceeEEEEecCCchhHHHHHHHH-HhccCCCCCccEEEEeCCCCCHHHHHHHHhcC--CCCCCcEEEEeccccc
Q 046508 591 LPNWNRMRISVNIVTQNRVHSLTRLLKSL-SNAYYLGDEVPISFNMDSKVDEATIKLVSTFD--WPHGPKTLRRRIIQGG 667 (932)
Q Consensus 591 L~aWnk~~i~IvIfaynRp~sL~RLL~SL-~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~--WP~g~vtlr~Ri~n~G 667 (932)
|.+=..+++.|+|=+||=.+.+.++|+|+ .+-+|. ...++|-.|.+ |+++.+.++... .| ++.+.. +.+.|
T Consensus 60 l~~~~~p~vaIlIPA~NE~~vI~~~l~s~L~~ldY~--~~eIiVv~d~n-dd~T~~~v~~l~~~~p--~v~~vv-~~~~g 133 (504)
T PRK14716 60 LRSVPEKRIAIFVPAWREADVIGRMLEHNLATLDYE--NYRIFVGTYPN-DPATLREVDRLAARYP--RVHLVI-VPHDG 133 (504)
T ss_pred cccCCCCceEEEEeccCchhHHHHHHHHHHHcCCCC--CeEEEEEECCC-ChhHHHHHHHHHHHCC--CeEEEE-eCCCC
Confidence 33334778899888999999999999985 667883 34555545543 434444443321 23 343222 22222
Q ss_pred ---hhhhh---hhhc--cc---CCCCceEEEEcCCcccChHHHHHHHHH
Q 046508 668 ---LIRAV---SESW--YP---ASDDDFGLLLEDDIEVSPYFYLWIKYA 705 (932)
Q Consensus 668 ---Lir~V---lEsf--~P---~~~~s~vIVLEDDlevSP~Fy~Ylk~A 705 (932)
-..++ ++.. .. ..+++++++++-|..++|.++..+++.
T Consensus 134 p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd~Lr~~~~~ 182 (504)
T PRK14716 134 PTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIHPLELRLYNYL 182 (504)
T ss_pred CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcCccHHHHHHhh
Confidence 11111 1111 11 123589999999999999999987654
No 133
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=87.33 E-value=4.8 Score=48.57 Aligned_cols=59 Identities=19% Similarity=0.186 Sum_probs=42.0
Q ss_pred ccccCCCCCCcEEEEEEcCCch--hHHHHHHHHHcCCCC--CceEEEEeCCCC----ChhhHHHHHh
Q 046508 167 KWDLKGPNRPKVTVILNHFKRK--TLCAQLDSLLQQTLP--FQHVWVLSFGSP----NELSLKRIVN 225 (932)
Q Consensus 167 ~~~~~~~~~~~VtaVVvTYNR~--~L~e~L~aLl~QT~~--~~~IiVvdnaSt----D~t~t~~~l~ 225 (932)
+|.+-+.....+.+.|+-||-- .|+..||+|..|+++ .+=|+||+||-- ++..|.+++-
T Consensus 16 ~~~~~~~~~~~~i~~v~cy~E~~~~l~~tldsl~~~~y~~~~k~~~vi~DG~i~g~g~~~~tp~~~l 82 (527)
T PF03142_consen 16 SYRPPEFPDKFVICLVPCYSEGEEELRTTLDSLATTDYDDSRKLIFVICDGMIKGSGNDKTTPEIVL 82 (527)
T ss_pred cCCCCCCCCceEEEEEccccCChHHHHHHHHHHHhcCCCCcccEEEEEcCcEEecCCCCCChHHHHH
Confidence 4444444556788999999984 499999999999986 556888888732 2223566664
No 134
>PF03214 RGP: Reversibly glycosylated polypeptide; InterPro: IPR004901 Alpha-1,4-glucan-protein synthase catalyses the reaction: protein + UDP-D-glucose = alpha-D-glucosyl-protein + UDP The enzyme has a possible role in the synthesis of cell wall polysaccharides in plants []. It is found associated with the cell wall, with the highest concentrations in the plasmodesmata. It is also located in the Golgi apparatus.; GO: 0008466 glycogenin glucosyltransferase activity, 0016758 transferase activity, transferring hexosyl groups, 0007047 cellular cell wall organization, 0030244 cellulose biosynthetic process, 0005618 cell wall, 0030054 cell junction
Probab=86.75 E-value=0.78 Score=51.98 Aligned_cols=95 Identities=15% Similarity=0.268 Sum_probs=53.0
Q ss_pred CCCcEEEEEEcCC-ch-hHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhc-----CCCce-EEEecCCCccc--
Q 046508 174 NRPKVTVILNHFK-RK-TLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSY-----NDSRI-SFISSSYDFKY-- 243 (932)
Q Consensus 174 ~~~~VtaVVvTYN-R~-~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~-----~~~~i-~~i~~~~N~Gg-- 243 (932)
.+..|-+||+|-+ -. ...|+-..++ +++|+|||-|+-..+. ..+.+-+ +.+.| +++....-+.+
T Consensus 6 ~~~~~divi~~~~~~l~~~~~~wr~~~----~~~hliiv~d~~~~~~--~~~p~g~~~~~y~~~di~~~lg~~~~i~~~~ 79 (348)
T PF03214_consen 6 LDDEVDIVIPALRPNLTDFLEEWRPFF----SPYHLIIVQDPDPNEE--IKVPEGFDYEVYNRNDIERVLGAKTLIPFKG 79 (348)
T ss_pred ccCcccEEeecccccHHHHHHHHHHhh----cceeEEEEeCCCcccc--ccCCcccceeeecHhhHHhhcCCcccccccc
Confidence 4556999999876 33 2333333443 4667777777666432 2333322 11111 12222222222
Q ss_pred -ccchhhhhhcCCcEEEEEcCCCCCchhHHHH
Q 046508 244 -YGRFQMALQTEADLVYIVDDDMIPGRKMLQI 274 (932)
Q Consensus 244 -aGgF~~a~~~~~dyVwimDDD~IP~~~~Le~ 274 (932)
+-|..+-+++..|||..|||||+|..|..-.
T Consensus 80 ~a~R~fGyL~s~~~yivsiDDD~~P~~D~~g~ 111 (348)
T PF03214_consen 80 DACRNFGYLVSKKDYIVSIDDDCLPAKDDFGT 111 (348)
T ss_pred cchhhhHhhhcccceEEEEccccccccCCccc
Confidence 3344445667889999999999999876433
No 135
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=85.97 E-value=5.6 Score=45.07 Aligned_cols=107 Identities=17% Similarity=0.120 Sum_probs=71.7
Q ss_pred CCceeEEEEecCCch-hHHHHHHHHHhccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCC-CCcEEEEe-ccccchhhhh
Q 046508 596 RMRISVNIVTQNRVH-SLTRLLKSLSNAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPH-GPKTLRRR-IIQGGLIRAV 672 (932)
Q Consensus 596 k~~i~IvIfaynRp~-sL~RLL~SL~~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~-g~vtlr~R-i~n~GLir~V 672 (932)
.+.+.|+|=+||=+. -+.+++.|+.+.||+. .++.+-.|.+ ++++.++++...=.. ..+.+.+. ..++|-..+.
T Consensus 53 ~p~vsviiP~ynE~~~~~~~~l~s~~~~dyp~--~evivv~d~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gK~~al 129 (439)
T COG1215 53 LPKVSVIIPAYNEEPEVLEETLESLLSQDYPR--YEVIVVDDGS-TDETYEILEELGAEYGPNFRVIYPEKKNGGKAGAL 129 (439)
T ss_pred CCceEEEEecCCCchhhHHHHHHHHHhCCCCC--ceEEEECCCC-ChhHHHHHHHHHhhcCcceEEEeccccCccchHHH
Confidence 578899888997665 9999999999999986 4455655544 444555554432111 13444432 4566655655
Q ss_pred hhhcccCCCCceEEEEcCCcccChHHHHHHHHHH
Q 046508 673 SESWYPASDDDFGLLLEDDIEVSPYFYLWIKYAL 706 (932)
Q Consensus 673 lEsf~P~~~~s~vIVLEDDlevSP~Fy~Ylk~AL 706 (932)
..+.. ....+++++++-|..+.|.|+..+...+
T Consensus 130 ~~~l~-~~~~d~V~~~DaD~~~~~d~l~~~~~~f 162 (439)
T COG1215 130 NNGLK-RAKGDVVVILDADTVPEPDALRELVSPF 162 (439)
T ss_pred HHHHh-hcCCCEEEEEcCCCCCChhHHHHHHhhh
Confidence 44433 3347999999999999999986655433
No 136
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=85.95 E-value=1.7 Score=47.40 Aligned_cols=118 Identities=14% Similarity=0.145 Sum_probs=57.4
Q ss_pred cCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcCCCCCCCCccccce
Q 046508 253 TEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKI 332 (932)
Q Consensus 253 ~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~~~~~rl 332 (932)
.+.||..++|||++...+.|..+|.... .-.+-.+|......|.. .++++...+ -.....
T Consensus 85 ~~~~Wf~~~DDDtyv~~~~L~~~L~~~~--~~~~~yiG~~~~~~~~~-------~~~~~~~~~-----------~~~~~~ 144 (252)
T PF02434_consen 85 SDKDWFCFADDDTYVNVENLRRLLSKYD--PSEPIYIGRPSGDRPIE-------IIHRFNPNK-----------SKDSGF 144 (252)
T ss_dssp HT-SEEEEEETTEEE-HHHHHHHHTTS---TTS--EEE-EE---------------------------------------
T ss_pred CCceEEEEEeCCceecHHHHHHHHhhCC--CccCEEeeeeccCccce-------eeccccccc-----------cCcCce
Confidence 4689999999999999999999986432 22232333222222221 111100000 000111
Q ss_pred EEeccccccccccHHHHHHh--h-cc-CCCcc----cchhhHHHHHHHHHhcCCCeeeecc-CCCCCC
Q 046508 333 VQVDFLSSSWFLSAELVKTL--F-IE-TPFTF----MTGEDLHLSYQLQKYRNAGSFVLPV-DPNDKA 391 (932)
Q Consensus 333 ~~~d~l~~~wf~~re~l~~~--f-~E-~~~~~----~t~eDlhLs~~~~ky~~i~~~vlp~-~p~~~~ 391 (932)
.++ -.|+.+.++|.+++.+ . .+ +-+.- +..+|+.|++-+..+.||+....|. |..++.
T Consensus 145 ~f~-~GGaG~vlSr~~~~k~~~~~~~~~~~~~~~~~~~~dD~~lG~ci~~~lgv~lt~s~~fhs~~~~ 211 (252)
T PF02434_consen 145 WFA-TGGAGYVLSRALLKKMSPWASGCKCPSTDEKIRLPDDMTLGYCIENLLGVPLTHSPLFHSHLEN 211 (252)
T ss_dssp -EE--GGG-EEEEHHHHHHHHHHHTT-TTS--TTTTTS-HHHHHHHHHHHTT---EEE-TT---SSS-
T ss_pred Eee-CCCeeHHHhHHHHHHHhhhcccccccCCcCCCCCcccChhhhhHHhcCCcceeechhhcccCcc
Confidence 122 4678899999999999 2 22 21111 2368999999999999999987664 555554
No 137
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=85.92 E-value=3.6 Score=44.21 Aligned_cols=94 Identities=21% Similarity=0.063 Sum_probs=63.4
Q ss_pred EecCC-chhHHHHHHHHHhccCCCCCccEEEEeC-CCCC-HHHHHHHHhcCCCCCCcEEEEeccccchhhhh---hhhcc
Q 046508 604 VTQNR-VHSLTRLLKSLSNAYYLGDEVPISFNMD-SKVD-EATIKLVSTFDWPHGPKTLRRRIIQGGLIRAV---SESWY 677 (932)
Q Consensus 604 faynR-p~sL~RLL~SL~~AdY~gd~~~LtI~lD-~~~D-~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~V---lEsf~ 677 (932)
++||| .+.|+++|.||.+-. ..+.| +| .+.| ..+.+.++.+ ..+++.+...|.|...+. ++--.
T Consensus 1 Vtyn~~~~~l~~~l~sl~~q~-----~~iiV-VDN~S~~~~~~~~~~~~~----~~i~~i~~~~N~G~a~a~N~Gi~~a~ 70 (281)
T TIGR01556 1 VTFNPDLEHLGELITSLPKQV-----DRIIA-VDNSPHSDQPLKNARLRG----QKIALIHLGDNQGIAGAQNQGLDASF 70 (281)
T ss_pred CccCccHHHHHHHHHHHHhcC-----CEEEE-EECcCCCcHhHHHHhccC----CCeEEEECCCCcchHHHHHHHHHHHH
Confidence 47998 589999999999752 23444 55 3333 4565555543 368888888899985543 12211
Q ss_pred cCCCCceEEEEcCCcccChHHHHHHHHHHHH
Q 046508 678 PASDDDFGLLLEDDIEVSPYFYLWIKYALLA 708 (932)
Q Consensus 678 P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl~ 708 (932)
....+|+++|+||..+.|.++.-+...+.+
T Consensus 71 -~~~~d~i~~lD~D~~~~~~~l~~l~~~~~~ 100 (281)
T TIGR01556 71 -RRGVQGVLLLDQDSRPGNAFLAAQWKLLSA 100 (281)
T ss_pred -HCCCCEEEEECCCCCCCHHHHHHHHHHHHh
Confidence 124589999999999999888766666543
No 138
>PLN02189 cellulose synthase
Probab=83.51 E-value=4.1 Score=52.29 Aligned_cols=149 Identities=15% Similarity=0.242 Sum_probs=87.2
Q ss_pred HHHHHHHHHcCCC-CCceEEEEeCCC-------CChhhHHHHHhhc---------CCCceEEEecCCCccc-----ccch
Q 046508 190 LCAQLDSLLQQTL-PFQHVWVLSFGS-------PNELSLKRIVNSY---------NDSRISFISSSYDFKY-----YGRF 247 (932)
Q Consensus 190 L~e~L~aLl~QT~-~~~~IiVvdnaS-------tD~t~t~~~l~~~---------~~~~i~~i~~~~N~Gg-----aGgF 247 (932)
+|..|+++.++.. -+++-|+++||+ .|..+..+++.+. .-+++.||.-++.-|. ||.-
T Consensus 441 ~kvRI~~l~a~~~~~p~~~~~m~dGt~W~g~~~~dHp~IiQVll~~~~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGAM 520 (1040)
T PLN02189 441 FKVRINAIVAKAQKVPPEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGHDTEGNELPRLVYVSREKRPGFQHHKKAGAM 520 (1040)
T ss_pred HHHHHHHHHhhcCccCCccceeccCccCCCCCCCCCHHHHHHHhcCCCCccccccccceeEEEeccCCCCCCcccchhhH
Confidence 9999999985544 366779999998 2332244555332 1156999998877663 3432
Q ss_pred hh-----hhhcCCcEEEEEcCCCCCc-hhHHHHHHhhccccccccccccccccc---cccCCCCCCCcccccccccccCc
Q 046508 248 QM-----ALQTEADLVYIVDDDMIPG-RKMLQILSHVAGTEKYKNSVLGSIGRI---LPFRQKDFTFPSYRKFRSKEAGL 318 (932)
Q Consensus 248 ~~-----a~~~~~dyVwimDDD~IP~-~~~Le~Ll~~~g~~~~~~~vlgs~G~~---vPf~~~d~~f~~y~~~~s~~~g~ 318 (932)
+. |++.+++||..+|=|+++. +++|.+.|=-. .|. ..|+- |=|+|+ |..-.+.| +.++.
T Consensus 521 NaLlRVSavmTNaPfILNLDCDmY~Nns~alr~AMCff-lDp-------~~g~~vAfVQFPQr---F~~i~k~D-~Ygn~ 588 (1040)
T PLN02189 521 NALIRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFL-MDP-------QIGRKVCYVQFPQR---FDGIDTHD-RYANR 588 (1040)
T ss_pred HHHHHHhhhccCCCeEEEccCccccCchHHHHHhhhhh-cCC-------ccCceeEEEeCccc---cCCCCCCC-ccCCc
Confidence 22 4678999999999999986 48888876221 111 12222 445555 21110000 00010
Q ss_pred CCCCCCCCc---cccceEEeccccccccccHHHHHHh
Q 046508 319 YLPDPAYDI---TVDKIVQVDFLSSSWFLSAELVKTL 352 (932)
Q Consensus 319 ~~p~~~y~~---~~~rl~~~d~l~~~wf~~re~l~~~ 352 (932)
..+-|++ ..+.+.-.-++|.+||+||+.|.-+
T Consensus 589 --~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALyG~ 623 (1040)
T PLN02189 589 --NTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGY 623 (1040)
T ss_pred --cceeeeeeecccccCCCccccccCceeeeeeeecc
Confidence 0000111 2344555668999999999999876
No 139
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=82.91 E-value=24 Score=42.45 Aligned_cols=102 Identities=19% Similarity=0.268 Sum_probs=65.3
Q ss_pred CCcEEEEEEcCCc-hh----HHHHHHHHHcCCCC-CceEEEEeCCCCChh---hHHHHHhh----cCCCceEEEecC-CC
Q 046508 175 RPKVTVILNHFKR-KT----LCAQLDSLLQQTLP-FQHVWVLSFGSPNEL---SLKRIVNS----YNDSRISFISSS-YD 240 (932)
Q Consensus 175 ~~~VtaVVvTYNR-~~----L~e~L~aLl~QT~~-~~~IiVvdnaStD~t---~t~~~l~~----~~~~~i~~i~~~-~N 240 (932)
.+.|.+|||.-+| .. ..+..+.+--++-. ..-++|+..+++|.. ..++++++ |...+|.+|... .+
T Consensus 246 ~~~V~iIvPl~~r~~~~~~~Fl~~~~~~~l~~~~~~~L~vV~~~~~~~~~~~~~ik~~l~~l~~k~~~~~i~~i~~~~~~ 325 (499)
T PF05679_consen 246 STRVHIIVPLSGREADWFRRFLENFEKVCLETDDNVFLTVVLFYDPSDSDSISQIKELLEELERKYPFSRIKWISVKTGE 325 (499)
T ss_pred CCEEEEEEEecCccHHHHHHHHHHHHHHhcccCCceEEEEEEecCcccchhHHHHHHHHHHHHHhCCccceEEEEecCCC
Confidence 3789999999999 42 44555555334333 444444444434432 12335554 445689999987 55
Q ss_pred cccccchhhhhh--cCCcEEEEEcCCCCCchhHHHHHH
Q 046508 241 FKYYGRFQMALQ--TEADLVYIVDDDMIPGRKMLQILS 276 (932)
Q Consensus 241 ~GgaGgF~~a~~--~~~dyVwimDDD~IP~~~~Le~Ll 276 (932)
+--+.|-..+.. ...+.+.+.|=|+.-+++.|...-
T Consensus 326 fsr~~~Ld~g~~~~~~d~L~f~~Dvd~~f~~~fL~rcR 363 (499)
T PF05679_consen 326 FSRGAALDVGAKKFPPDSLLFFCDVDMVFTSDFLNRCR 363 (499)
T ss_pred ccHHHHHHhhcccCCCCcEEEEEeCCcccCHHHHHHHH
Confidence 444444444433 357899999999999999999884
No 140
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=81.94 E-value=5.9 Score=51.10 Aligned_cols=152 Identities=14% Similarity=0.215 Sum_probs=86.2
Q ss_pred HHHHHHHHHcCCC-CCceEEEEeCCC-------CChhhHHHHHhhc---------CCCceEEEecCCCccc-----ccch
Q 046508 190 LCAQLDSLLQQTL-PFQHVWVLSFGS-------PNELSLKRIVNSY---------NDSRISFISSSYDFKY-----YGRF 247 (932)
Q Consensus 190 L~e~L~aLl~QT~-~~~~IiVvdnaS-------tD~t~t~~~l~~~---------~~~~i~~i~~~~N~Gg-----aGgF 247 (932)
+|..|+++.++.. .+++-|+++|++ .|..+..+++-+. .-+.+.||.-++.-|. ||--
T Consensus 459 ~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g~~~~dHp~IiqVll~~~~~~d~~g~~lP~LVYVSREKRPg~~Hh~KAGAM 538 (1079)
T PLN02638 459 FKVRINGLVAKAQKVPEEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAM 538 (1079)
T ss_pred HHHHHHHHHhhccccCCccccccCCccCCCCCCCCCHHHHHHHhcCCCccccccccccceEEEecccCCCCCcccccchH
Confidence 9999999985533 356679999998 1332234444321 1157799998877663 3322
Q ss_pred hh-----hhhcCCcEEEEEcCCCCCc-hhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcCCC
Q 046508 248 QM-----ALQTEADLVYIVDDDMIPG-RKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLP 321 (932)
Q Consensus 248 ~~-----a~~~~~dyVwimDDD~IP~-~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p 321 (932)
+. |++.+++||..+|=|+.+. |++|.+.|=.. .|.- .|..=..|=|+|+ |..-.+.| +.++. .
T Consensus 539 NaLlRVSavmTNaPfILNLDCDmYiNns~alr~AMCf~-lDp~----~g~~vafVQFPQr---F~~i~k~D-~Ygn~--~ 607 (1079)
T PLN02638 539 NALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFL-MDPN----LGKSVCYVQFPQR---FDGIDRND-RYANR--N 607 (1079)
T ss_pred HHHHHHhhhccCCCeEeecccCcccCchHHHHHhhhhh-cCcc----cCCeeEEecCCcc---cCCCCCCC-ccccc--c
Confidence 22 4678999999999999555 99998877221 1111 1111112455555 21110000 00110 0
Q ss_pred CCCCCc---cccceEEeccccccccccHHHHHHh
Q 046508 322 DPAYDI---TVDKIVQVDFLSSSWFLSAELVKTL 352 (932)
Q Consensus 322 ~~~y~~---~~~rl~~~d~l~~~wf~~re~l~~~ 352 (932)
.+-|++ ..+.+.-.-++|.+||+||+.|.-+
T Consensus 608 ~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~ 641 (1079)
T PLN02638 608 TVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGY 641 (1079)
T ss_pred eeeeccccccccccCCccccccCcceeehhhcCc
Confidence 000111 2344455568899999999999875
No 141
>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43).
Probab=80.73 E-value=6 Score=42.94 Aligned_cols=98 Identities=16% Similarity=0.197 Sum_probs=56.8
Q ss_pred cEEEEEEcCCchhHHHHHHHHHcCCC---CCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCC----------ccc
Q 046508 177 KVTVILNHFKRKTLCAQLDSLLQQTL---PFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYD----------FKY 243 (932)
Q Consensus 177 ~VtaVVvTYNR~~L~e~L~aLl~QT~---~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N----------~Gg 243 (932)
.|.+|=|||.|..=+.-|.-| +||. |+-+=|||+|+...-..+.++|++.. +.|.++... -|.
T Consensus 2 ~i~vVTPTy~R~~Q~~~LtRL-a~TL~lVp~l~WIVVEd~~~~t~~va~lL~~sg---l~y~HL~~~~~~~~~~~~~rg~ 77 (223)
T cd00218 2 TIYVVTPTYARPVQKAELTRL-AHTLRLVPPLHWIVVEDSEEKTPLVAELLRRSG---LMYTHLNAKTPSDPTWLKPRGV 77 (223)
T ss_pred eEEEECCCCccchhhHHHHHH-HHHHhcCCceEEEEEeCCCCCCHHHHHHHHHcC---CceEEeccCCCCCcccCCcccH
Confidence 478889999996411112222 2332 34445667777633234678887753 445554332 122
Q ss_pred ccchhh--hhh-----cCCcEEEEEcCCCCCchhHHHHHHhh
Q 046508 244 YGRFQM--ALQ-----TEADLVYIVDDDMIPGRKMLQILSHV 278 (932)
Q Consensus 244 aGgF~~--a~~-----~~~dyVwimDDD~IP~~~~Le~Ll~~ 278 (932)
..|+.. ++. ...--|.|+|||-+=.-+-.+++-+.
T Consensus 78 ~qRn~AL~~ir~~~~~~~~GVVyFADDdN~Ysl~lF~emR~i 119 (223)
T cd00218 78 EQRNLALRWIREHLSAKLDGVVYFADDDNTYDLELFEEMRKI 119 (223)
T ss_pred HHHHHHHHHHHhccccCcceEEEEccCCCcccHHHHHHHhcc
Confidence 333322 121 24568999999999888889997654
No 142
>PLN03180 reversibly glycosylated polypeptide; Provisional
Probab=78.87 E-value=3.2 Score=47.32 Aligned_cols=25 Identities=20% Similarity=0.371 Sum_probs=19.8
Q ss_pred chhhhhhcCCcEEEEEcCCCCCchh
Q 046508 246 RFQMALQTEADLVYIVDDDMIPGRK 270 (932)
Q Consensus 246 gF~~a~~~~~dyVwimDDD~IP~~~ 270 (932)
|..+-+.+..+|+..|||||+|-.+
T Consensus 85 R~fGyL~s~~~yivsiDDD~~Pa~d 109 (346)
T PLN03180 85 RCFGYLVSKKKYIFTIDDDCFVAKD 109 (346)
T ss_pred hhhhheeecceEEEEECCCCCCCCC
Confidence 3333355679999999999999988
No 143
>COG1213 Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane]
Probab=78.19 E-value=6.9 Score=42.83 Aligned_cols=100 Identities=16% Similarity=0.239 Sum_probs=66.5
Q ss_pred CCCcEEEEEEcCCchhHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCCcccccchhhh--h
Q 046508 174 NRPKVTVILNHFKRKTLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYDFKYYGRFQMA--L 251 (932)
Q Consensus 174 ~~~~VtaVVvTYNR~~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N~GgaGgF~~a--~ 251 (932)
+.||.-+=|- ||+-|..+|++|..+. ..+++||-||=-.+. .++++.+|+- ..+++.++.--.++-+|.+. .
T Consensus 20 ~~PK~Lvev~--gr~ii~~~i~~L~~~g--i~e~vvV~~g~~~~l-ve~~l~~~~~-~~~iv~N~~y~ktN~~~Sl~~ak 93 (239)
T COG1213 20 DIPKALVEVG--GREIIYRTIENLAKAG--ITEFVVVTNGYRADL-VEEFLKKYPF-NAKIVINSDYEKTNTGYSLLLAK 93 (239)
T ss_pred CCCchhhhcC--CeEeHHHHHHHHHHcC--CceEEEEeccchHHH-HHHHHhcCCc-ceEEEeCCCcccCCceeEEeeeh
Confidence 4555444333 6667999999997665 678899988877653 6667766653 45555555444455556553 2
Q ss_pred h-cCCcEEEEEcCCCCCchhHHHHHHhhcc
Q 046508 252 Q-TEADLVYIVDDDMIPGRKMLQILSHVAG 280 (932)
Q Consensus 252 ~-~~~dyVwimDDD~IP~~~~Le~Ll~~~g 280 (932)
. .+.+ +.+++=|.+=+|..+|.++++.|
T Consensus 94 d~~~~~-fii~~sD~vye~~~~e~l~~a~~ 122 (239)
T COG1213 94 DYMDGR-FILVMSDHVYEPSILERLLEAPG 122 (239)
T ss_pred hhhcCc-EEEEeCCEeecHHHHHHHHhCcC
Confidence 2 3556 45566788889999999998644
No 144
>PLN02195 cellulose synthase A
Probab=77.72 E-value=9.3 Score=48.99 Aligned_cols=149 Identities=15% Similarity=0.205 Sum_probs=82.4
Q ss_pred HHHHHHHHHcC-CCCCceEEEEeCCCC-------ChhhHHHHHhhc---------CCCceEEEecCCCccc-----ccch
Q 046508 190 LCAQLDSLLQQ-TLPFQHVWVLSFGSP-------NELSLKRIVNSY---------NDSRISFISSSYDFKY-----YGRF 247 (932)
Q Consensus 190 L~e~L~aLl~Q-T~~~~~IiVvdnaSt-------D~t~t~~~l~~~---------~~~~i~~i~~~~N~Gg-----aGgF 247 (932)
+|..|++|.+- ...+.+.|.+.|++. |..+.-+++-.. .-+.+.||.-++.-|. ||.-
T Consensus 362 ~k~RIe~~~~~~~~~~~~~~~m~d~t~W~g~~~~dHp~IIqVll~~~~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGam 441 (977)
T PLN02195 362 YKVRVNALVAKAQKTPEEGWTMQDGTPWPGNNTRDHPGMIQVFLGETGARDIEGNELPRLVYVSREKRPGYQHHKKAGAE 441 (977)
T ss_pred HHHHHHHHHhhcccCCcccccccCCccCCCCCCCCCcchhhhhccCCCCcccccccCceeEEEeccCCCCCCcccccchh
Confidence 99999999753 122455577777762 433233444111 1168999998877663 4433
Q ss_pred hh-----hhhcCCcEEEEEcCCCCCch-hHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcCCC
Q 046508 248 QM-----ALQTEADLVYIVDDDMIPGR-KMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLP 321 (932)
Q Consensus 248 ~~-----a~~~~~dyVwimDDD~IP~~-~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p 321 (932)
+. |++.+++||..+|=|+++.+ ++|.+.|=-.- |. -.|..=..|=|+|+ | ..-.++|...
T Consensus 442 NallrvSavmTNap~il~lDcDmy~n~s~~lr~AMCf~~-D~----~~g~~va~VQ~PQ~---F------~~i~~~D~y~ 507 (977)
T PLN02195 442 NALVRVSAVLTNAPYILNLDCDHYVNNSKAVREAMCFLM-DP----VVGRDVCYVQFPQR---F------DGIDRSDRYA 507 (977)
T ss_pred HHHHHHhhhccCCCeEEEecCccccCcHHHHHHHHhhcc-Cc----ccCCeeEEEcCCcc---c------CCCCCCCCCC
Confidence 33 34678999999999986666 68887662111 11 11111112444444 1 1111111000
Q ss_pred ---CCCCCc---cccceEEeccccccccccHHHHHHh
Q 046508 322 ---DPAYDI---TVDKIVQVDFLSSSWFLSAELVKTL 352 (932)
Q Consensus 322 ---~~~y~~---~~~rl~~~d~l~~~wf~~re~l~~~ 352 (932)
..-|++ ..+.+.-.=++|.+||+||+.|.-+
T Consensus 508 ~~~~~ffd~~~~g~dglqGP~YvGTGC~fRR~ALyG~ 544 (977)
T PLN02195 508 NRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGY 544 (977)
T ss_pred cccceeeeeeeccccccCCccccccCceeeehhhhcc
Confidence 000111 2344555568899999999998766
No 145
>PF13733 Glyco_transf_7N: N-terminal region of glycosyl transferase group 7; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=74.67 E-value=8.1 Score=39.05 Aligned_cols=83 Identities=23% Similarity=0.306 Sum_probs=49.7
Q ss_pred ccccCCC-CCCcEEEEEEcCCchh-HHHHHH---HHH-cCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCC
Q 046508 167 KWDLKGP-NRPKVTVILNHFKRKT-LCAQLD---SLL-QQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYD 240 (932)
Q Consensus 167 ~~~~~~~-~~~~VtaVVvTYNR~~-L~e~L~---aLl-~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N 240 (932)
.|.++.- ..-+|++|||--||.. |+.-|. ..| .|.. .+.|+||+=.-+. .+|
T Consensus 37 ~~~p~~C~~~~kvAiIIPyRdR~~hL~~fl~~l~~~L~rQ~~-~y~I~vieQ~~~~---------------------~FN 94 (136)
T PF13733_consen 37 HWKPPDCKPRHKVAIIIPYRDREEHLRIFLPHLHPFLQRQQL-DYRIFVIEQVDNG---------------------PFN 94 (136)
T ss_dssp EE--SSSB-S-EEEEEEEESS-HHHHHHHHHHHHHHHHHTT--EEEEEEEEE-SSS------------------------
T ss_pred eecCCccccccceEEEEEeCCHHHHHHHHHHHHHHHHhhCcc-eEEEEEEeeccCC---------------------CCc
Confidence 4544433 3447999999888863 666544 334 4554 6778888765332 135
Q ss_pred cc--cccchhhhhhc-CCcEEEEEcCCCCCchhH
Q 046508 241 FK--YYGRFQMALQT-EADLVYIVDDDMIPGRKM 271 (932)
Q Consensus 241 ~G--gaGgF~~a~~~-~~dyVwimDDD~IP~~~~ 271 (932)
.| .+-||..|+.. +.|++.+=|=|.+|..+-
T Consensus 95 Rg~L~NvGf~eA~~~~~~dc~ifHDVDllP~~~~ 128 (136)
T PF13733_consen 95 RGKLMNVGFLEALKDDDFDCFIFHDVDLLPENDR 128 (136)
T ss_dssp HHHHHHHHHHHHHHHS--SEEEEE-TTEEESBTT
T ss_pred hhhhhhHHHHHHhhccCCCEEEEecccccccCCC
Confidence 55 57889999874 799999999999998753
No 146
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=74.64 E-value=6.7 Score=42.66 Aligned_cols=85 Identities=20% Similarity=0.189 Sum_probs=54.4
Q ss_pred HHHHHHHHcCCCC-CceEEEEeCCCCChhhHHHHHhhc--CCCceEEEecCC-Ccccccchhhh----hhcCCcEEEEE-
Q 046508 191 CAQLDSLLQQTLP-FQHVWVLSFGSPNELSLKRIVNSY--NDSRISFISSSY-DFKYYGRFQMA----LQTEADLVYIV- 261 (932)
Q Consensus 191 ~e~L~aLl~QT~~-~~~IiVvdnaStD~t~t~~~l~~~--~~~~i~~i~~~~-N~GgaGgF~~a----~~~~~dyVwim- 261 (932)
+=||-+|.+||-+ +.-||++++.+++. ..+-|+++ ..++++++-.+. +.. .-...+ ...+++++...
T Consensus 45 ~~~LpSl~~QTd~dF~~lv~~~~~~P~~--~~~rL~~l~~~~p~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~R 120 (234)
T PF11316_consen 45 TYCLPSLRAQTDQDFTWLVLFDDDLPEP--YRERLRDLLADYPQFRIVFRPPGPHR--DAMRRAINAARRDGADPVLQFR 120 (234)
T ss_pred HHHhhHHHhccCCCeEEEEEECCCCCHH--HHHHHHHHhccCCCcEEEecCCchHH--HHHHHHHhhhccCCCCEEEEEE
Confidence 3469999999997 55566688888875 35555554 224444444332 111 111112 22468887776
Q ss_pred -cCCCCCchhHHHHHHhhc
Q 046508 262 -DDDMIPGRKMLQILSHVA 279 (932)
Q Consensus 262 -DDD~IP~~~~Le~Ll~~~ 279 (932)
|||+.-..+.++.|-..+
T Consensus 121 LDdDDAl~~dFV~rlr~~a 139 (234)
T PF11316_consen 121 LDDDDALHRDFVARLRRAA 139 (234)
T ss_pred ECCcchhhHHHHHHHHHHH
Confidence 999999999999997664
No 147
>PF01755 Glyco_transf_25: Glycosyltransferase family 25 (LPS biosynthesis protein); InterPro: IPR002654 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 25 GT25 from CAZY comprises enzymes with only one known activity; as a lipopolysaccharide biosynthesis protein. These enzymes catalyse the transfer of various sugars onto the growing lipopolysaccharide chain during its biosynthesis [].; GO: 0009103 lipopolysaccharide biosynthetic process
Probab=74.08 E-value=3 Score=42.70 Aligned_cols=28 Identities=29% Similarity=0.493 Sum_probs=24.5
Q ss_pred CCceEEEEcCCcccChHHHHHHHHHHHH
Q 046508 681 DDDFGLLLEDDIEVSPYFYLWIKYALLA 708 (932)
Q Consensus 681 ~~s~vIVLEDDlevSP~Fy~Ylk~ALl~ 708 (932)
..+++||||||+.+++.|-..+...+..
T Consensus 85 ~~~~~lIlEDDv~~~~~f~~~l~~~~~~ 112 (200)
T PF01755_consen 85 GLEYALILEDDVIFDPDFKEFLEEILSH 112 (200)
T ss_pred CCCeEEEEeccccccccHHHHHHHHHhh
Confidence 4589999999999999999988877665
No 148
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=73.08 E-value=23 Score=39.53 Aligned_cols=116 Identities=14% Similarity=0.210 Sum_probs=74.6
Q ss_pred ceEEEecchhhhhhhhhhHHHHhccCCceEEEEEecCCCCCHHHHHHhcCCCcCCCccccccccccccccccCCCCCchh
Q 046508 442 DALFYAHSVDEVRALAPLLEKFRSTVGKKAYIVVSGGNFCPCEDAASALNWPKLVCKERRFKIFDLTIGALSGVSNSEVP 521 (932)
Q Consensus 442 ~vLFaA~sL~~v~~LlPlaC~m~~~~~~~vh~almG~~~i~~e~~~~vnG~~~~~C~d~Rp~~fd~~~~~~s~~~r~~~~ 521 (932)
.|++...+=-+.--+.|+..+.....+-.+.+++.|++.-..+++.+.+|++.. +++.++. ++.+ ...
T Consensus 2 ~i~~~~gtr~~~~~~~p~~~~l~~~~~~~~~~~~tg~h~~~~~~~~~~~~i~~~---------~~~~~~~-~~~~--~~~ 69 (365)
T TIGR00236 2 KVSIVLGTRPEAIKMAPLIRALKKYPEIDSYVIVTAQHREMLDQVLDLFHLPPD---------YDLNIMS-PGQT--LGE 69 (365)
T ss_pred eEEEEEecCHHHHHHHHHHHHHhhCCCCCEEEEEeCCCHHHHHHHHHhcCCCCC---------eeeecCC-CCCC--HHH
Confidence 478888888899999999999998877788899999987777888888888631 1233333 2221 111
Q ss_pred HHHHHHHhhhhchhhcCCcEEEEecccCHHHHHHHHHhhhhccCCceEEEcC
Q 046508 522 VVQAVFSSMKGLIKIHNPSVVITVADIDSNVKKALKMATETKSNGTTLVLLP 573 (932)
Q Consensus 522 ~~~~v~~~~~~~~~~~~P~viIt~~~~~~~~~~a~~~a~~~~~~~~~~I~LP 573 (932)
........+.-+..-..|.+|+++++..+.+ .|...| ...|+|++.+-
T Consensus 70 ~~~~~~~~l~~~l~~~~pDiv~~~gd~~~~l-a~a~aa---~~~~ipv~h~~ 117 (365)
T TIGR00236 70 ITSNMLEGLEELLLEEKPDIVLVQGDTTTTL-AGALAA---FYLQIPVGHVE 117 (365)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEeCCchHHH-HHHHHH---HHhCCCEEEEe
Confidence 1112223344444556799999997654323 233322 24688887664
No 149
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=72.68 E-value=18 Score=45.55 Aligned_cols=109 Identities=11% Similarity=0.008 Sum_probs=65.6
Q ss_pred CCCceeEEEEecCCchhHHHHHHHHH-hccCCCCCccEEEEeCCCCCHHHHHHHHhcCCCCCCcE--EEEeccccchhhh
Q 046508 595 NRMRISVNIVTQNRVHSLTRLLKSLS-NAYYLGDEVPISFNMDSKVDEATIKLVSTFDWPHGPKT--LRRRIIQGGLIRA 671 (932)
Q Consensus 595 nk~~i~IvIfaynRp~sL~RLL~SL~-~AdY~gd~~~LtI~lD~~~D~~~~~~l~~f~WP~g~vt--lr~Ri~n~GLir~ 671 (932)
..+.+.|+|=+||=.+...++++++. +-+|+. ..+.+-.+ ..|++|.+.++...=.++++. +..|..|.|=..+
T Consensus 61 ~~~~vsIlVPa~nE~~vi~~~i~~ll~~ldYP~--~eI~vi~~-~nD~~T~~~~~~l~~~~p~~~~v~~~~~g~~gKa~a 137 (727)
T PRK11234 61 DEKPLAIMVPAWNETGVIGNMAELAATTLDYEN--YHIFVGTY-PNDPATQADVDAVCARFPNVHKVVCARPGPTSKADC 137 (727)
T ss_pred CCCCEEEEEecCcchhhHHHHHHHHHHhCCCCC--eEEEEEec-CCChhHHHHHHHHHHHCCCcEEEEeCCCCCCCHHHH
Confidence 35667887778899999999999885 568874 44554444 456666666665431123343 3334334443222
Q ss_pred h---hh---hcccCC--CCceEEEEcCCcccChHHHHHHHHHH
Q 046508 672 V---SE---SWYPAS--DDDFGLLLEDDIEVSPYFYLWIKYAL 706 (932)
Q Consensus 672 V---lE---sf~P~~--~~s~vIVLEDDlevSP~Fy~Ylk~AL 706 (932)
+ ++ .+.... .+..++|.+-|..++|.++..+++.+
T Consensus 138 LN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v~pd~L~~~~~l~ 180 (727)
T PRK11234 138 LNNVLDAITQFERSANFAFAGFILHDAEDVISPMELRLFNYLV 180 (727)
T ss_pred HHHHHHHHHhhhcccCCcccEEEEEcCCCCCChhHHHHHHhhc
Confidence 1 12 112111 23457789999999999999655443
No 150
>PF04666 Glyco_transf_54: N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region; InterPro: IPR006759 The complex-type of oligosaccharides are synthesised through elongation by glycosyltransferases after trimming of the precursor oligosaccharides transferred to proteins in the endoplasmic reticulum. N-Acetylglucosaminyltransferases (GnTs) take part in the formation of branches in the biosynthesis of complex-type sugar chains. In vertebrates, six GnTs, designated as GnT-I to -VI, which catalyse the transfer of GlcNAc to the core mannose residues of Asn-linked sugar chains, have been identified. GnT-IV (2.4.1.145 from EC) catalyzes the transfer of GlcNAc from UDP-GlcNAc to the GlcNAc1-2Man1-3 arm of core oligosaccharide [Gn2(22)core oligosaccharide] and forms a GlcNAc1-4(GlcNAc1-2)Man1-3 structure on the core oligosaccharide (Gn3(2,4,2)core oligosaccharide). In some members the conserved region occupies all but the very N-terminal, where there is a signal sequence on all members. For other members the conserved region does not occupy the entire protein but is still to the N-terminal end of the protein [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane
Probab=71.83 E-value=4.9 Score=45.22 Aligned_cols=31 Identities=35% Similarity=0.398 Sum_probs=27.6
Q ss_pred CCceEEEEcCCcccChHHHHHHHHHHHHhcC
Q 046508 681 DDDFGLLLEDDIEVSPYFYLWIKYALLAYHY 711 (932)
Q Consensus 681 ~~s~vIVLEDDlevSP~Fy~Ylk~ALl~Y~y 711 (932)
..+|.|.||||+..+|.|++-++.++..-..
T Consensus 169 ~~~YyL~LEDDVia~~~f~~~i~~~v~~~~~ 199 (297)
T PF04666_consen 169 LGDYYLQLEDDVIAAPGFLSRIKRFVEAWES 199 (297)
T ss_pred cCCeEEEecCCeEechhHHHHHHHHHHHhcC
Confidence 3578999999999999999999999998654
No 151
>PLN03153 hypothetical protein; Provisional
Probab=66.33 E-value=19 Score=43.57 Aligned_cols=97 Identities=15% Similarity=0.072 Sum_probs=56.2
Q ss_pred cCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccCcCCCCCCCCccccce
Q 046508 253 TEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKI 332 (932)
Q Consensus 253 ~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~~~~~rl 332 (932)
-+.+|+.++||||+--.+.|-++|.... .-..-. .|... .++.+..+ -.|+
T Consensus 209 pd~kWfVf~DDDTyf~~~NLv~~Ls~YD--ptkp~Y---IGs~S----e~~~qn~~--------------f~~~------ 259 (537)
T PLN03153 209 PDVRWFVLGDDDTIFNADNLVAVLSKYD--PSEMVY---VGGPS----ESHSANSY--------------FSHN------ 259 (537)
T ss_pred CCCCEEEEecCCccccHHHHHHHHhhcC--CCCCEE---ecccc----cccccccc--------------cccc------
Confidence 4689999999999877777777764322 212222 34321 11100000 0011
Q ss_pred EEeccccccccccHHHHHHh---hccCCC-cc-cchhhHHHHHHHHHhcCCCee
Q 046508 333 VQVDFLSSSWFLSAELVKTL---FIETPF-TF-MTGEDLHLSYQLQKYRNAGSF 381 (932)
Q Consensus 333 ~~~d~l~~~wf~~re~l~~~---f~E~~~-~~-~t~eDlhLs~~~~ky~~i~~~ 381 (932)
--+.|+..++++.+++.+ +++-.- .. ..++|..|+.-+++ .||+..
T Consensus 260 --fA~GGAG~~LSrPLae~L~~~~d~C~~rY~~~~~gD~rL~~CL~e-lGV~LT 310 (537)
T PLN03153 260 --MAFGGGGIAISYPLAEALSRILDDCLDRYPKLYGSDDRLHACITE-LGVPLS 310 (537)
T ss_pred --cccCCceEEEcHHHHHHHHHHhhhhhhhcccCCCcHHHHHHHHHH-cCCCce
Confidence 247899999999766665 444211 11 24578888777776 688884
No 152
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=64.26 E-value=42 Score=42.22 Aligned_cols=119 Identities=11% Similarity=0.104 Sum_probs=72.6
Q ss_pred cCCcccccCcCCCceeEEEEecCCchhHHHHHHHH-HhccCCCCCccEEEEeC-CCCCHHHHHHHHhcCCCCCCcEEEEe
Q 046508 585 DLRSAALPNWNRMRISVNIVTQNRVHSLTRLLKSL-SNAYYLGDEVPISFNMD-SKVDEATIKLVSTFDWPHGPKTLRRR 662 (932)
Q Consensus 585 ~Ld~~sL~aWnk~~i~IvIfaynRp~sL~RLL~SL-~~AdY~gd~~~LtI~lD-~~~D~~~~~~l~~f~WP~g~vtlr~R 662 (932)
+++...|.+=..+.+.|+|=+||=.+.+.+|++++ .+-+|+. +.|.+= -..|.+|...++...=.+..+++.+.
T Consensus 59 ~~~~~~l~~~~~~~vsIlVPa~nE~~VI~~~v~~ll~~ldYp~----~~I~v~~~~nD~~T~~~~~~~~~~~p~~~~v~~ 134 (703)
T PRK15489 59 PLTAEQLRERDEQPLAIMVPAWKEYDVIAKMIENMLATLDYRR----YVIFVGTYPNDAETITEVERMRRRYKRLVRVEV 134 (703)
T ss_pred CCChHHhcccCCCceEEEEeCCCcHHHHHHHHHHHHhcCCCCC----eEEEEEecCCCccHHHHHHHHhccCCcEEEEEc
Confidence 35556666556778899888999999999999996 5669973 344441 12344666666655422224554444
Q ss_pred ccc--cchh-------hhhhhhcccCCCCce--EEEEcCCcccChHHHHHHHHHHHH
Q 046508 663 IIQ--GGLI-------RAVSESWYPASDDDF--GLLLEDDIEVSPYFYLWIKYALLA 708 (932)
Q Consensus 663 i~n--~GLi-------r~VlEsf~P~~~~s~--vIVLEDDlevSP~Fy~Ylk~ALl~ 708 (932)
..+ .|=. .++.+. .....-+| +++.+-|-.+.|.++.||++.+..
T Consensus 135 ~~~gp~gKa~ALN~~l~~~~~~-e~~~~~~fa~vvi~DAEd~~~P~~L~~~~~~~~~ 190 (703)
T PRK15489 135 PHDGPTCKADCLNWIIQAIFRY-EAGHGIEFAGVILHDSEDVLHPLELKYFNYLLPR 190 (703)
T ss_pred CCCCCCCHHHHHHHHHHHHHhh-hhhccCccceEEEEcCCCCCChhHHHHHHhhcCC
Confidence 333 1211 111111 11111233 788999999999999999876643
No 153
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=63.89 E-value=52 Score=36.00 Aligned_cols=24 Identities=25% Similarity=0.304 Sum_probs=22.0
Q ss_pred CCceEEEEcCCcccChHHHHHHHH
Q 046508 681 DDDFGLLLEDDIEVSPYFYLWIKY 704 (932)
Q Consensus 681 ~~s~vIVLEDDlevSP~Fy~Ylk~ 704 (932)
..+++++|+.|+.++|.|+..+..
T Consensus 88 ~~d~l~flD~D~i~~~~~i~~~~~ 111 (281)
T PF10111_consen 88 RGDYLIFLDADCIPSPDFIEKLLN 111 (281)
T ss_pred CCCEEEEEcCCeeeCHHHHHHHHH
Confidence 568999999999999999988887
No 154
>PRK02122 glucosamine-6-phosphate deaminase-like protein; Validated
Probab=61.07 E-value=1.3e+02 Score=37.55 Aligned_cols=43 Identities=9% Similarity=0.223 Sum_probs=28.7
Q ss_pred ccccceEEEecchhh-hhhhhhhHHHHhccCCceEEEEEecCCCC
Q 046508 438 PQKIDALFYAHSVDE-VRALAPLLEKFRSTVGKKAYIVVSGGNFC 481 (932)
Q Consensus 438 ~q~~~vLFaA~sL~~-v~~LlPlaC~m~~~~~~~vh~almG~~~i 481 (932)
+.+.+||+.+.=++| +=.+.-...+.+.+ |+.||+|.+..+++
T Consensus 367 ~~~~rvLv~spHPDDevi~~GGTlarl~~~-G~~V~vv~~TsG~~ 410 (652)
T PRK02122 367 PYPKRVIIFSPHPDDDVISMGGTFRRLVEQ-GHDVHVAYQTSGNI 410 (652)
T ss_pred cCCceEEEEEeCCCchHhhhHHHHHHHHHC-CCcEEEEEecCCcc
Confidence 334566666555665 55556667777777 99999998854443
No 155
>KOG3916 consensus UDP-Gal:glucosylceramide beta-1,4-galactosyltransferase [Carbohydrate transport and metabolism]
Probab=61.02 E-value=28 Score=40.09 Aligned_cols=87 Identities=18% Similarity=0.215 Sum_probs=62.5
Q ss_pred ccccccccCCCCC-CcEEEEEEcCCchh-HHHH---HHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEec
Q 046508 163 AMKSKWDLKGPNR-PKVTVILNHFKRKT-LCAQ---LDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISS 237 (932)
Q Consensus 163 ~~~s~~~~~~~~~-~~VtaVVvTYNR~~-L~e~---L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~ 237 (932)
++--+|.+++=+. -+|++|||-=||.+ |+-- |.-+|++..--+.|+||+-.-++-
T Consensus 137 ~pGG~~~P~dC~ar~kvAIIIPfR~Re~HL~~~l~~LhP~LqrQrL~y~iyVieQ~g~~~-------------------- 196 (372)
T KOG3916|consen 137 RPGGRYRPEDCQARHKVAIIIPFRNREEHLRYLLHHLHPFLQRQRLDYRIYVIEQAGNKP-------------------- 196 (372)
T ss_pred CCCCCcCCCCCCccceeEEEeecccHHHHHHHHHHHhhHHHHhhhhceeEEEEEecCCCc--------------------
Confidence 3444787777633 37999999889964 5444 555555444466799998776652
Q ss_pred CCCcc--cccchhhhhh-cCCcEEEEEcCCCCCchh
Q 046508 238 SYDFK--YYGRFQMALQ-TEADLVYIVDDDMIPGRK 270 (932)
Q Consensus 238 ~~N~G--gaGgF~~a~~-~~~dyVwimDDD~IP~~~ 270 (932)
+|.+ .+-||+.|++ .+.|=+.|-|=|.+|+.|
T Consensus 197 -FNRakL~NVGf~eAlkd~~wdCfIFHDVDllPenD 231 (372)
T KOG3916|consen 197 -FNRAKLLNVGFLEALKDYGWDCFIFHDVDLLPEND 231 (372)
T ss_pred -ccHHHhhhhHHHHHHHhcCCCEEEEecccccccCC
Confidence 2333 5789999998 788999999999999866
No 156
>KOG1413 consensus N-acetylglucosaminyltransferase I [Carbohydrate transport and metabolism]
Probab=58.97 E-value=46 Score=38.66 Aligned_cols=111 Identities=16% Similarity=0.170 Sum_probs=69.9
Q ss_pred EEEEEEcCCch-hHHHHHHHHHcCCC--CCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecC----------CCcc-c
Q 046508 178 VTVILNHFKRK-TLCAQLDSLLQQTL--PFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSS----------YDFK-Y 243 (932)
Q Consensus 178 VtaVVvTYNR~-~L~e~L~aLl~QT~--~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~----------~N~G-g 243 (932)
+.+||-.-||. +|+.|++.|+.+.- ....|||--||...+ +.+-+.+|+. .+.++... .+++ +
T Consensus 69 ~pvvVf~csR~~~lr~~v~kll~yrPsaekfpiiVSQD~~~e~--vk~~~~~~g~-~v~~i~~~~h~~~ei~v~~~~~k~ 145 (411)
T KOG1413|consen 69 IPVVVFACSRADALRRHVKKLLEYRPSAEKFPIIVSQDCEKEA--VKKKLLSYGS-DVSHIQHPMHLKDEISVPPRHKKF 145 (411)
T ss_pred eeEEEEecCcHHHHHHHHHHHHHhCcchhhcCEEEeccCCcHH--HHHHHHHhcc-chhhhcCccccccccccCCccccc
Confidence 44555566886 59999999999852 255688887877765 4677777643 12222222 1111 2
Q ss_pred ccchhh-----------hhhcCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccc
Q 046508 244 YGRFQM-----------ALQTEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGS 291 (932)
Q Consensus 244 aGgF~~-----------a~~~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs 291 (932)
.|=+.. ....++++|.+..||.=-.|+..+......-.-+..+.++|.
T Consensus 146 ~~Yy~IarHYkwAL~q~F~~~~~s~vii~eDDl~iapDFF~YF~~t~~llk~D~siwcv 204 (411)
T KOG1413|consen 146 NAYYKIARHYKWALNQLFIVFRESRVIITEDDLNIAPDFFSYFRNTIILLKGDPSIWCV 204 (411)
T ss_pred chhHHHHHHHHHHHhhHHhhcCCceeEEecchhhhhhHHHHHHHHHHHHHhcCCceEEe
Confidence 221111 234579999999999988889888776554444444567775
No 157
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=53.38 E-value=35 Score=42.89 Aligned_cols=146 Identities=16% Similarity=0.278 Sum_probs=82.5
Q ss_pred HHHHHHHHHcCCC-CCceEEEEeCCC-------CChhhHHHHHhhc------------CCCceEEEecCCCcccccch--
Q 046508 190 LCAQLDSLLQQTL-PFQHVWVLSFGS-------PNELSLKRIVNSY------------NDSRISFISSSYDFKYYGRF-- 247 (932)
Q Consensus 190 L~e~L~aLl~QT~-~~~~IiVvdnaS-------tD~t~t~~~l~~~------------~~~~i~~i~~~~N~GgaGgF-- 247 (932)
+|..|+++.+... .+.+.|++.|++ .|. ..+++=. .-+.+.||.-++.-|..=.|
T Consensus 109 ~k~ri~~~~~~~~~~~~~~~~~~~~~~w~~~~~~dH---~~iiqv~~~~~~~~~~~g~~lP~lvYvsREKrp~~~Hh~KA 185 (720)
T PF03552_consen 109 FKVRIEALVAKIQKVPEEGWTMQDGTPWPGNTRRDH---PGIIQVLLDNPGGKDVDGNELPMLVYVSREKRPGYPHHFKA 185 (720)
T ss_pred HHHHHHHHhhhhhcccccceeccCCCcCCCCCCcCC---hhheEeeccCCCCcccccCcCCeEEEEeccCCCCCCchhhh
Confidence 7788888765432 356667666652 232 2344311 12689999988776643222
Q ss_pred ----hh----hhhcCCcEEEEEcCCC-CCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccc---cccccc
Q 046508 248 ----QM----ALQTEADLVYIVDDDM-IPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYR---KFRSKE 315 (932)
Q Consensus 248 ----~~----a~~~~~dyVwimDDD~-IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~---~~~s~~ 315 (932)
.+ |+..++.||.-+|=|+ +..|.++.+.|=... |.-. |..=..|=|+|+ |..-. .+.++-
T Consensus 186 GAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~-d~~~----g~~~~~vQfpq~---f~~i~~~d~y~~~~ 257 (720)
T PF03552_consen 186 GAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFM-DPKI----GKKIAFVQFPQR---FDGIDKNDRYGNQN 257 (720)
T ss_pred cccccccccceeecCCCEEEEecccccccchHHHHHHHHhhc-cCCC----CCeeEEEeCCce---eCCCCcCCCCCccc
Confidence 22 4667899999999998 899999888763211 2211 111112456655 22110 111110
Q ss_pred cCcCCCCCCCCc---cccceEEeccccccccccHHHHHHh
Q 046508 316 AGLYLPDPAYDI---TVDKIVQVDFLSSSWFLSAELVKTL 352 (932)
Q Consensus 316 ~g~~~p~~~y~~---~~~rl~~~d~l~~~wf~~re~l~~~ 352 (932)
+ +-|++ ..+-+.-.-|+|.+||+||+.|.-+
T Consensus 258 -----~-~~~~~~~~g~dG~~gp~y~Gtgc~~rR~al~g~ 291 (720)
T PF03552_consen 258 -----R-VFFDINMRGLDGLQGPFYVGTGCFFRREALYGF 291 (720)
T ss_pred -----e-eeeeccccccccCCCceeeecCcceechhhhCC
Confidence 0 00111 2334445568999999999998876
No 158
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=52.76 E-value=1.3e+02 Score=34.60 Aligned_cols=120 Identities=10% Similarity=0.154 Sum_probs=70.6
Q ss_pred ceEEEecchhhhhhhhhhHHHHhccCCceEEEEEecCCCCC-----HHHHHHhcCCCcCCCccccccccccccccccCCC
Q 046508 442 DALFYAHSVDEVRALAPLLEKFRSTVGKKAYIVVSGGNFCP-----CEDAASALNWPKLVCKERRFKIFDLTIGALSGVS 516 (932)
Q Consensus 442 ~vLFaA~sL~~v~~LlPlaC~m~~~~~~~vh~almG~~~i~-----~e~~~~vnG~~~~~C~d~Rp~~fd~~~~~~s~~~ 516 (932)
.|++...+=-+.--|.|++-.+....+-.+.++..|-+.-+ ..++... |.+.. + .+ |+.+..-++.
T Consensus 2 ki~~v~GtRpe~iklapv~~~l~~~~~~~~~lv~tGqH~~~~~g~~~~~~~~~-~~~~~-~---~~---~~~~~~~~~~- 72 (365)
T TIGR03568 2 KICVVTGTRADYGLLRPLLKALQDDPDLELQLIVTGMHLSPEYGNTVNEIEKD-GFDID-E---KI---EILLDSDSNA- 72 (365)
T ss_pred eEEEEEecChhHHHHHHHHHHHhcCCCCcEEEEEeCCCCChhhccHHHHHHHc-CCCCC-C---cc---ccccCCCCCC-
Confidence 57777777778889999999998877788888888765432 5555554 44221 1 11 3323321111
Q ss_pred CCchhHHHHHHHhhhhchhhcCCcEEEEecccCHHHHHHHHHhhhhccCCceEEEcCCC
Q 046508 517 NSEVPVVQAVFSSMKGLIKIHNPSVVITVADIDSNVKKALKMATETKSNGTTLVLLPRP 575 (932)
Q Consensus 517 r~~~~~~~~v~~~~~~~~~~~~P~viIt~~~~~~~~~~a~~~a~~~~~~~~~~I~LP~~ 575 (932)
+.......+...+..+..-+.|.+|++.++....+--|+-. ..+++|++.+=.+
T Consensus 73 -~~~~~~~~~~~~~~~~~~~~~Pd~vlv~GD~~~~la~alaA----~~~~IPv~HveaG 126 (365)
T TIGR03568 73 -GMAKSMGLTIIGFSDAFERLKPDLVVVLGDRFEMLAAAIAA----ALLNIPIAHIHGG 126 (365)
T ss_pred -CHHHHHHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHH----HHhCCcEEEEECC
Confidence 11222222333344444456799999998776544444432 2568887766554
No 159
>PRK02726 molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional
Probab=49.11 E-value=78 Score=32.96 Aligned_cols=85 Identities=11% Similarity=0.027 Sum_probs=53.8
Q ss_pred CCchh-HHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecC-CCcccccchhhhhh-cCCcEEEEE
Q 046508 185 FKRKT-LCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSS-YDFKYYGRFQMALQ-TEADLVYIV 261 (932)
Q Consensus 185 YNR~~-L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~-~N~GgaGgF~~a~~-~~~dyVwim 261 (932)
++++. |..+|+++... ..+|+|+-+... ..+...+..+.++... ...|..++-..++. ...++|+|+
T Consensus 30 ~~g~~ll~~~i~~l~~~---~~~ivvv~~~~~-------~~~~~~~~~~~~i~~~~~~~G~~~si~~~l~~~~~~~vlv~ 99 (200)
T PRK02726 30 WQGVPLLQRVARIAAAC---ADEVYIITPWPE-------RYQSLLPPGCHWLREPPPSQGPLVAFAQGLPQIKTEWVLLL 99 (200)
T ss_pred ECCEeHHHHHHHHHHhh---CCEEEEECCCHH-------HHHhhccCCCeEecCCCCCCChHHHHHHHHHhCCCCcEEEE
Confidence 45654 78889888642 467888765221 1122222235555433 33565556555655 457999999
Q ss_pred cCCC-CCchhHHHHHHhhc
Q 046508 262 DDDM-IPGRKMLQILSHVA 279 (932)
Q Consensus 262 DDD~-IP~~~~Le~Ll~~~ 279 (932)
+=|+ .-+++.+++|++..
T Consensus 100 ~~D~P~i~~~~i~~l~~~~ 118 (200)
T PRK02726 100 ACDLPRLTVDVLQEWLQQL 118 (200)
T ss_pred eCCCCCCCHHHHHHHHHHh
Confidence 9997 77999999998753
No 160
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=46.35 E-value=40 Score=35.27 Aligned_cols=125 Identities=21% Similarity=0.211 Sum_probs=56.2
Q ss_pred cceEEEecchhhhhhhhhhHHHHhccCCceEEEEEecCCCCCHHHHHHhcCCCcCCCccccccccccccccccCCCCCch
Q 046508 441 IDALFYAHSVDEVRALAPLLEKFRSTVGKKAYIVVSGGNFCPCEDAASALNWPKLVCKERRFKIFDLTIGALSGVSNSEV 520 (932)
Q Consensus 441 ~~vLFaA~sL~~v~~LlPlaC~m~~~~~~~vh~almG~~~i~~e~~~~vnG~~~~~C~d~Rp~~fd~~~~~~s~~~r~~~ 520 (932)
..+-|=|+|++++..+.||+.++..+ .-..+++|.....-..+.+.+..+-.. .|-- =| +|+
T Consensus 22 ~~iWiHa~SvGE~~a~~~Li~~l~~~-~p~~~illT~~T~tg~~~~~~~~~~~v-~~~~-~P--~D~------------- 83 (186)
T PF04413_consen 22 PLIWIHAASVGEVNAARPLIKRLRKQ-RPDLRILLTTTTPTGREMARKLLPDRV-DVQY-LP--LDF------------- 83 (186)
T ss_dssp T-EEEE-SSHHHHHHHHHHHHHHTT----TS-EEEEES-CCHHHHHHGG-GGG--SEEE------SS-------------
T ss_pred CcEEEEECCHHHHHHHHHHHHHHHHh-CCCCeEEEEecCCchHHHHHHhCCCCe-EEEE-eC--ccC-------------
Confidence 68999999999999999999999987 223477777666666666655542211 1100 00 122
Q ss_pred hHHHHHHHhhhhchhhcCCcEEEEecc-cCHHHHHHHHHhhhhccCCceEEEc----CCCccccccccccCCcccccCcC
Q 046508 521 PVVQAVFSSMKGLIKIHNPSVVITVAD-IDSNVKKALKMATETKSNGTTLVLL----PRPSITKVLWMADLRSAALPNWN 595 (932)
Q Consensus 521 ~~~~~v~~~~~~~~~~~~P~viIt~~~-~~~~~~~a~~~a~~~~~~~~~~I~L----P~~~~~~~~Wia~Ld~~sL~aWn 595 (932)
+ .+++.+.....|+++|..+. .=+.++.+++. .|++++.+ ..+...+..|+..|-...|+...
T Consensus 84 ~------~~~~rfl~~~~P~~~i~~EtElWPnll~~a~~------~~ip~~LvNarls~~s~~~~~~~~~~~r~~l~~f~ 151 (186)
T PF04413_consen 84 P------WAVRRFLDHWRPDLLIWVETELWPNLLREAKR------RGIPVVLVNARLSERSFRRYRRFPFLFRPLLSRFD 151 (186)
T ss_dssp H------HHHHHHHHHH--SEEEEES----HHHHHH-----------S-EEEEEE--------------HHHHHHGGG-S
T ss_pred H------HHHHHHHHHhCCCEEEEEccccCHHHHHHHhh------cCCCEEEEeeeeccccchhhhhhHHHHHHHHHhCC
Confidence 1 11233444557999998743 33666666553 47776664 44444455555555555554443
No 161
>PLN02458 transferase, transferring glycosyl groups
Probab=46.11 E-value=1e+02 Score=35.65 Aligned_cols=101 Identities=14% Similarity=0.127 Sum_probs=56.1
Q ss_pred CCCcEEEEEEcCC-chhHHHHHHHHHcCCC---C-CceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCC--Ccc---c
Q 046508 174 NRPKVTVILNHFK-RKTLCAQLDSLLQQTL---P-FQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSY--DFK---Y 243 (932)
Q Consensus 174 ~~~~VtaVVvTYN-R~~L~e~L~aLl~QT~---~-~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~--N~G---g 243 (932)
+..-|.+|=|||. |..=+.-|.-| +||+ | +-+=|||+++..-. .|.++|++.. +.|.++.. |+. +
T Consensus 110 ~~rlIivVTPTY~rR~~Q~a~LTRL-ahTL~lVp~pL~WIVVEd~~~t~-~va~lLrrsG---l~y~HL~~k~~~~~~~~ 184 (346)
T PLN02458 110 PRRLVIIVTPISTKDRYQGVLLRRL-ANTLRLVPPPLLWIVVEGQSDSE-EVSEMLRKTG---IMYRHLVFKENFTDPEA 184 (346)
T ss_pred CCceEEEECCCCCCcchhHHHHHHH-HHHHhcCCCCceEEEEeCCCCCH-HHHHHHHHcC---CceEEeccCCCCCCccc
Confidence 4456999999999 43211112222 3333 3 23344555554333 3688887753 33444433 432 1
Q ss_pred ---ccchhh--hhh--cCCcEEEEEcCCCCCchhHHHHHHhhc
Q 046508 244 ---YGRFQM--ALQ--TEADLVYIVDDDMIPGRKMLQILSHVA 279 (932)
Q Consensus 244 ---aGgF~~--a~~--~~~dyVwimDDD~IP~~~~Le~Ll~~~ 279 (932)
+-|+.. ++. ...--|+|+|||-+=.-+-.+++-+..
T Consensus 185 r~~~QRN~AL~~IR~h~l~GVVyFADDdNtYsl~LFeEmR~ik 227 (346)
T PLN02458 185 ELDHQRNLALRHIEHHKLSGIVHFAGLSNVYDLDFFDEIRDIE 227 (346)
T ss_pred hhHHHHHHHHHHHHhcCcCceEEEccCCCcccHHHHHHHhcCc
Confidence 113322 222 346789999999988888888876543
No 162
>cd04182 GT_2_like_f GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=45.59 E-value=80 Score=31.20 Aligned_cols=88 Identities=17% Similarity=0.203 Sum_probs=52.9
Q ss_pred CCch-hHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecC-CCcccccchhhhhhc---CCcEEE
Q 046508 185 FKRK-TLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSS-YDFKYYGRFQMALQT---EADLVY 259 (932)
Q Consensus 185 YNR~-~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~-~N~GgaGgF~~a~~~---~~dyVw 259 (932)
++++ .|.-.|+++.+. ...+|+|+-+.... .+.+......+.++... ...|-.++...|++. ..|++.
T Consensus 23 ~~g~~li~~~i~~l~~~--~~~~i~vv~~~~~~-----~~~~~~~~~~~~~~~~~~~~~G~~~~i~~al~~~~~~~~~vl 95 (186)
T cd04182 23 LDGKPLLRHALDAALAA--GLSRVIVVLGAEAD-----AVRAALAGLPVVVVINPDWEEGMSSSLAAGLEALPADADAVL 95 (186)
T ss_pred eCCeeHHHHHHHHHHhC--CCCcEEEECCCcHH-----HHHHHhcCCCeEEEeCCChhhCHHHHHHHHHHhccccCCEEE
Confidence 3555 477778888765 46778887654322 12222222234444433 334555566666552 379999
Q ss_pred EEcCCC-CCchhHHHHHHhhc
Q 046508 260 IVDDDM-IPGRKMLQILSHVA 279 (932)
Q Consensus 260 imDDD~-IP~~~~Le~Ll~~~ 279 (932)
++.=|+ .-+++.+++|++..
T Consensus 96 v~~~D~P~i~~~~i~~l~~~~ 116 (186)
T cd04182 96 ILLADQPLVTAETLRALIDAF 116 (186)
T ss_pred EEeCCCCCCCHHHHHHHHHHH
Confidence 999998 56788899998653
No 163
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=44.31 E-value=80 Score=37.47 Aligned_cols=122 Identities=24% Similarity=0.267 Sum_probs=82.4
Q ss_pred ccccccceEEEecchhhhhhhhhhHHHHhccCCceEEEEEecCCCCCHHHHHHhcCCCcCCCccccccccccccccccCC
Q 046508 436 MYPQKIDALFYAHSVDEVRALAPLLEKFRSTVGKKAYIVVSGGNFCPCEDAASALNWPKLVCKERRFKIFDLTIGALSGV 515 (932)
Q Consensus 436 ~~~q~~~vLFaA~sL~~v~~LlPlaC~m~~~~~~~vh~almG~~~i~~e~~~~vnG~~~~~C~d~Rp~~fd~~~~~~s~~ 515 (932)
..++...|-|=|.|++++..++||..+.... .-.+.+++.....-+.|-+++..|-. .|+-==| +|+
T Consensus 45 ~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~-~P~~~ilvTt~T~Tg~e~a~~~~~~~--v~h~YlP--~D~-------- 111 (419)
T COG1519 45 VKPEGPLVWIHAASVGEVLAALPLVRALRER-FPDLRILVTTMTPTGAERAAALFGDS--VIHQYLP--LDL-------- 111 (419)
T ss_pred CCCCCCeEEEEecchhHHHHHHHHHHHHHHh-CCCCCEEEEecCccHHHHHHHHcCCC--eEEEecC--cCc--------
Confidence 3455568899999999999999999999887 33456777777778889999998876 3441001 122
Q ss_pred CCCchhHHHHHHHhhhhchhhcCCcEEEEeccc-CHHHHHHHHHhhhhccCCceEEEcCCCccccccccccCCcccccCc
Q 046508 516 SNSEVPVVQAVFSSMKGLIKIHNPSVVITVADI-DSNVKKALKMATETKSNGTTLVLLPRPSITKVLWMADLRSAALPNW 594 (932)
Q Consensus 516 ~r~~~~~~~~v~~~~~~~~~~~~P~viIt~~~~-~~~~~~a~~~a~~~~~~~~~~I~LP~~~~~~~~Wia~Ld~~sL~aW 594 (932)
.-+.+.+.....|..+|..++. =+.+...++. .|+|+|-+= ++|+..|.+.|
T Consensus 112 -----------~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~------~~~p~~LvN----------aRLS~rS~~~y 164 (419)
T COG1519 112 -----------PIAVRRFLRKWRPKLLIIMETELWPNLINELKR------RGIPLVLVN----------ARLSDRSFARY 164 (419)
T ss_pred -----------hHHHHHHHHhcCCCEEEEEeccccHHHHHHHHH------cCCCEEEEe----------eeechhhhHHH
Confidence 1122344556689998887433 2555555543 478887764 45667777777
Q ss_pred CCC
Q 046508 595 NRM 597 (932)
Q Consensus 595 nk~ 597 (932)
.+.
T Consensus 165 ~k~ 167 (419)
T COG1519 165 AKL 167 (419)
T ss_pred HHH
Confidence 763
No 164
>KOG1476 consensus Beta-1,3-glucuronyltransferase B3GAT1/SQV-8 [Posttranslational modification, protein turnover, chaperones]
Probab=43.98 E-value=1.1e+02 Score=35.29 Aligned_cols=99 Identities=15% Similarity=0.204 Sum_probs=56.9
Q ss_pred CCcEEEEEEcCCchh---HHHHHHHHHcCCCCCceEEEEeCC-CCChhhHHHHHhhcCCCceEEEecC--CCc------c
Q 046508 175 RPKVTVILNHFKRKT---LCAQLDSLLQQTLPFQHVWVLSFG-SPNELSLKRIVNSYNDSRISFISSS--YDF------K 242 (932)
Q Consensus 175 ~~~VtaVVvTYNR~~---L~e~L~aLl~QT~~~~~IiVvdna-StD~t~t~~~l~~~~~~~i~~i~~~--~N~------G 242 (932)
.+.|.||=|||+|.. .--.|..=|.|--+++ =|||+|| .+.. .+..+|++..- .|.... .+. |
T Consensus 86 ~~~iivVTPTY~R~~q~~~LtRlanTL~~V~nLh-WIVVEd~~~~~p-~v~~~L~rtgl---~ythl~~~t~~~~~~~rg 160 (330)
T KOG1476|consen 86 LPTIIVVTPTYVRPVQAAELTRLANTLRLVPNLH-WIVVEDGEGTTP-EVSGILRRTGL---PYTHLVHKTPMGYKARRG 160 (330)
T ss_pred CccEEEEcccccchhHHHHHHHHHHHHhhcCCee-EEEEecCCCCCH-HHHHHHHHcCC---ceEEEeccCCCCCccccc
Confidence 567999999999963 2222333334433455 4556666 3332 36788877532 233222 222 2
Q ss_pred cccchhh--hhh-------cCCcEEEEEcCCCCCchhHHHHHHhh
Q 046508 243 YYGRFQM--ALQ-------TEADLVYIVDDDMIPGRKMLQILSHV 278 (932)
Q Consensus 243 gaGgF~~--a~~-------~~~dyVwimDDD~IP~~~~Le~Ll~~ 278 (932)
-.-|... ++. ...--|.|-|||-+=.-+-.+++-.+
T Consensus 161 ~~qRn~aL~~ir~~~~~~~~~~GVVyFADDdN~YdleLF~eiR~v 205 (330)
T KOG1476|consen 161 WEQRNMALRWIRSRILRHHKLEGVVYFADDDNTYDLELFEEIRNV 205 (330)
T ss_pred hhHHHHHHHHHHHhcccccccceEEEEccCCcchhHHHHHHHhcc
Confidence 2333322 232 34668999999988888888885443
No 165
>PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry.; InterPro: IPR005835 Nucleotidyl transferases transfer nucleotides from one compound to another. This domain is found in a number of enzymes that transfer nucleotides onto phosphosugars.; GO: 0016779 nucleotidyltransferase activity, 0009058 biosynthetic process; PDB: 1YP2_C 1YP4_D 1YP3_B 1H5S_D 1H5R_C 1H5T_C 2E3D_B 1JYL_C 1JYK_A 1MP5_C ....
Probab=43.40 E-value=44 Score=35.04 Aligned_cols=91 Identities=19% Similarity=0.196 Sum_probs=58.5
Q ss_pred EEcCCc-hhHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCC--CceEEEecCCCcccccchhhhhh-cCC--
Q 046508 182 LNHFKR-KTLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYND--SRISFISSSYDFKYYGRFQMALQ-TEA-- 255 (932)
Q Consensus 182 VvTYNR-~~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~--~~i~~i~~~~N~GgaGgF~~a~~-~~~-- 255 (932)
++-.+| +.|.-.|+.|.+ .-+.+||||.++...+ ...+.+.+... .+|.++..+...|-+|....+.. ...
T Consensus 25 l~i~g~~pli~~~l~~l~~--~g~~~ii~V~~~~~~~-~i~~~~~~~~~~~~~i~~i~~~~~~Gta~al~~a~~~i~~~~ 101 (248)
T PF00483_consen 25 LPIGGKYPLIDYVLENLAN--AGIKEIIVVVNGYKEE-QIEEHLGSGYKFGVKIEYIVQPEPLGTAGALLQALDFIEEED 101 (248)
T ss_dssp SEETTEEEHHHHHHHHHHH--TTCSEEEEEEETTTHH-HHHHHHTTSGGGTEEEEEEEESSSSCHHHHHHHTHHHHTTSE
T ss_pred ceecCCCcchhhhhhhhcc--cCCceEEEEEeecccc-cccccccccccccccceeeecccccchhHHHHHHHHHhhhcc
Confidence 333477 667778888877 4578866665544432 24566665432 36899999988888887766644 232
Q ss_pred --cEEEEEcCCCCCchhHHHHHH
Q 046508 256 --DLVYIVDDDMIPGRKMLQILS 276 (932)
Q Consensus 256 --dyVwimDDD~IP~~~~Le~Ll 276 (932)
+++.++-+|.+-.. .+..++
T Consensus 102 ~~~~~lv~~gD~i~~~-~~~~~l 123 (248)
T PF00483_consen 102 DDEDFLVLNGDIIFDD-DLQDML 123 (248)
T ss_dssp E-SEEEEETTEEEEST-THHHHH
T ss_pred ccceEEEEeccccccc-hhhhHH
Confidence 35888888876664 444444
No 166
>KOG3588 consensus Chondroitin synthase 1 [Carbohydrate transport and metabolism]
Probab=43.05 E-value=1.1e+02 Score=36.07 Aligned_cols=229 Identities=17% Similarity=0.171 Sum_probs=111.3
Q ss_pred cccccccccccchhhHHhhHHHHHHHHhhhhccCCcccHHHHHccccccccCCCCCCcEEEEEEcCCchh-HHHHHHHHH
Q 046508 120 EKIDFLQKKSNDAQMIKVKTELYKEILDFQSKSIGTETLNELMAMKSKWDLKGPNRPKVTVILNHFKRKT-LCAQLDSLL 198 (932)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~VtaVVvTYNR~~-L~e~L~aLl 198 (932)
.-.+|-.|--.++.-|..+|++|=.-.-=-.+...++.+-++..+= ++|.|..|+|-.-|.. +..-+...-
T Consensus 181 dlll~~kk~~~n~~T~~vrrhaY~Qqtf~l~~r~~~~~f~~~s~~i--------~~pgih~i~pl~gr~~~f~rf~q~~c 252 (494)
T KOG3588|consen 181 DLLLWFKKFRPNRTTISVRRHAYVQQTFGLLRRLSEGVFRANSTLI--------EDPGIHMIMPLRGRAAIFARFAQSIC 252 (494)
T ss_pred eHHHHHHHhcCCCCccchhhhHHHHHHHHHHhccchHhHHhhcccc--------cCCCceEEEeccchHHHhhhhhHHHh
Confidence 3345555655677779999999832111011111111221111111 6778999999988865 444333322
Q ss_pred c-CCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCCcccccchhhh--hhcC------CcEEEEEcCCCCCch
Q 046508 199 Q-QTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYDFKYYGRFQMA--LQTE------ADLVYIVDDDMIPGR 269 (932)
Q Consensus 199 ~-QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N~GgaGgF~~a--~~~~------~dyVwimDDD~IP~~ 269 (932)
. |.-.++=++|+-+-|.++..-.+.+.++ +++|++. .-+|-.|-|..| ++.+ .-.+.+.|=|.+=+.
T Consensus 253 ~~~d~~l~l~vv~f~~se~e~ak~e~~tsl---ra~f~~~-q~l~lngeFSRa~aL~vGAe~~~~nvLLFfcDVDi~FT~ 328 (494)
T KOG3588|consen 253 ARGDDRLALSVVYFGYSEDEMAKRETITSL---RASFIPV-QFLGLNGEFSRAKALMVGAETLNANVLLFFCDVDIYFTT 328 (494)
T ss_pred ccCCCceEEEEEEecCCChHHHhhhHHHHH---hhcCCce-EEecccchhhhhHHHHhhHHHhccceeEEEeccceeehH
Confidence 2 2222443444444455543111222233 3333333 345566667553 2222 234577788999999
Q ss_pred hHHHHHHhh--ccccccc--------cccccccccccccCCCCCCCcccccccccccCcCCCCCCCCccccceEEecccc
Q 046508 270 KMLQILSHV--AGTEKYK--------NSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQVDFLS 339 (932)
Q Consensus 270 ~~Le~Ll~~--~g~~~~~--------~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g~~~p~~~y~~~~~rl~~~d~l~ 339 (932)
++|+..--- -|..-|. +.++-..+..+|--+ .+ .+ +++ +-||+|-+|+++
T Consensus 329 efL~rcr~Nt~~gkqiyfPivFS~ynp~ivy~~~~~~p~e~------~~-~~-~~~-tGfwRdfGfGmt----------- 388 (494)
T KOG3588|consen 329 EFLNRCRLNTILGKQIYFPIVFSQYNPEIVYEQDKPLPAEQ------QL-VI-KKD-TGFWRDFGFGMT----------- 388 (494)
T ss_pred HHHHHHhhccCCCceEEEEEEEeecCcceeecCCCCCchhH------he-ee-ccc-cccccccCCcee-----------
Confidence 999877311 1111111 222222233333110 00 00 111 224777667653
Q ss_pred ccccccHHHHHHh-hccCCCcccchhhHHHHHHHHHhcCCCeeeec
Q 046508 340 SSWFLSAELVKTL-FIETPFTFMTGEDLHLSYQLQKYRNAGSFVLP 384 (932)
Q Consensus 340 ~~wf~~re~l~~~-f~E~~~~~~t~eDlhLs~~~~ky~~i~~~vlp 384 (932)
|-.+.++++.= |+++.-.|- +||.||=-+..+ .|+.++-.|
T Consensus 389 --c~yrsd~~~vgGFD~~I~GWG-~EDV~Ly~K~v~-~~l~viR~p 430 (494)
T KOG3588|consen 389 --CQYRSDFLTVGGFDMEIKGWG-GEDVDLYRKYVH-SGLKVIRTP 430 (494)
T ss_pred --EEeeccceeecCcceeeeccC-cchHHHHHHHHh-cCcEEEecC
Confidence 44445555444 777766774 799999433333 566555433
No 167
>TIGR03202 pucB xanthine dehydrogenase accessory protein pucB. In Bacillus subtilis the expression of this protein, located in an operon with the structural subunits of xanthine dehydrogenase, has been found to be essential for XDH activity. Some members of this family appear to have a distant relationship to the MobA protein involved in molybdopterin biosynthesis, although this may be coincidental.
Probab=40.00 E-value=1.4e+02 Score=30.35 Aligned_cols=91 Identities=20% Similarity=0.176 Sum_probs=54.2
Q ss_pred cCCchh-HHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhc--CCCceEEE-ecCCCcccccchhhhhhc----CC
Q 046508 184 HFKRKT-LCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSY--NDSRISFI-SSSYDFKYYGRFQMALQT----EA 255 (932)
Q Consensus 184 TYNR~~-L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~--~~~~i~~i-~~~~N~GgaGgF~~a~~~----~~ 255 (932)
.++++. |..+|+.+++ . ...+|+|+-+...+. .+.+.+. .+..+.++ +.+...|-.++...+++. +.
T Consensus 22 ~~~g~~ll~~~i~~~~~-~-~~~~i~vv~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~G~~~si~~gl~~~~~~~~ 96 (190)
T TIGR03202 22 PLGETTLGSASLKTALS-S-RLSKVIVVIGEKYAH---LSWLDPYLLADERIMLVCCRDACEGQAHSLKCGLRKAEAMGA 96 (190)
T ss_pred eeCCccHHHHHHHHHHh-C-CCCcEEEEeCCccch---hhhhhHhhhcCCCeEEEECCChhhhHHHHHHHHHHHhccCCC
Confidence 356665 6666877653 2 467888888664331 1222221 22334444 333334534445445442 58
Q ss_pred cEEEEEcCCC-CCchhHHHHHHhhc
Q 046508 256 DLVYIVDDDM-IPGRKMLQILSHVA 279 (932)
Q Consensus 256 dyVwimDDD~-IP~~~~Le~Ll~~~ 279 (932)
|++.+++=|+ .-+++.++.|+++.
T Consensus 97 d~vlv~~~D~P~v~~~~i~~L~~~~ 121 (190)
T TIGR03202 97 DAVVILLADQPFLTADVINALLALA 121 (190)
T ss_pred CeEEEEeCCCCCCCHHHHHHHHHHH
Confidence 9999999997 66889999998763
No 168
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=38.62 E-value=2.3e+02 Score=34.95 Aligned_cols=107 Identities=14% Similarity=0.212 Sum_probs=71.8
Q ss_pred CCCcEEEEEEcCCch-----h-HHHHHHHHHcCCC-CCceEEEEeCCCCChhhHH------HHHhhcC-CCceEEEecCC
Q 046508 174 NRPKVTVILNHFKRK-----T-LCAQLDSLLQQTL-PFQHVWVLSFGSPNELSLK------RIVNSYN-DSRISFISSSY 239 (932)
Q Consensus 174 ~~~~VtaVVvTYNR~-----~-L~e~L~aLl~QT~-~~~~IiVvdnaStD~t~t~------~~l~~~~-~~~i~~i~~~~ 239 (932)
...+.++++|+||-- + |+..-++|.+--. .-.++.|+.|--..+-.+. ++-++.+ ..+|-|-.-.+
T Consensus 142 ~~hrTAilmPiynEd~~rVfAgLrA~~eSla~Tg~~~~FD~FVLSDs~dpdialAEq~a~~~l~~e~~g~~~ifYRrRr~ 221 (736)
T COG2943 142 DLHRTAILMPIYNEDVNRVFAGLRATYESLAATGHAEHFDFFVLSDSRDPDIALAEQKAWAELCRELGGEGNIFYRRRRR 221 (736)
T ss_pred cccceeEEeeccccCHHHHHHHHHHHHHHHHhhCCcccceEEEEcCCCCchhhhhHHHHHHHHHHHhCCCCceeeehHhh
Confidence 444688899999983 2 7777777765422 4567899988554432111 1112222 25787777889
Q ss_pred Ccc-cccchhhhhh---cCCcEEEEEcCCCCCchhHHHHHHhhcc
Q 046508 240 DFK-YYGRFQMALQ---TEADLVYIVDDDMIPGRKMLQILSHVAG 280 (932)
Q Consensus 240 N~G-gaGgF~~a~~---~~~dyVwimDDD~IP~~~~Le~Ll~~~g 280 (932)
|.| -+|+-.-++. ..|+|..++|-|.+=+.+||-.|.+.-.
T Consensus 222 n~~RKaGNIaDfcrRwG~~Y~~MlVLDADSvMtgd~lvrLv~~ME 266 (736)
T COG2943 222 NVKRKAGNIADFCRRWGSAYSYMLVLDADSVMTGDCLVRLVRLME 266 (736)
T ss_pred hhcccccCHHHHHHHhCcccceEEEeecccccCchHHHHHHHHHh
Confidence 999 4555444544 4799999999999999999888876543
No 169
>TIGR03310 matur_ygfJ molybdenum hydroxylase accessory protein, YgfJ family. Members of this protein family are probable accessory proteins for the biosynthesis of enzymes related to xanthine dehydrogenase. Comparative genomics suggests a role in the maturation of selenium-dependent molybdenum hydroxylases, although a tenuous alternative hypothesis is a role for this protein (with a requirement for SelD, the selenium donor protein in the selenocysteine and selenouridine biosynthesis pathways) metabolizing a selenium-containing substrate such as selenate.
Probab=38.09 E-value=2e+02 Score=28.78 Aligned_cols=87 Identities=17% Similarity=0.222 Sum_probs=54.5
Q ss_pred CCch-hHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcC-CCceEEEecCC-Ccccccchhhhhh--cCCcEEE
Q 046508 185 FKRK-TLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYN-DSRISFISSSY-DFKYYGRFQMALQ--TEADLVY 259 (932)
Q Consensus 185 YNR~-~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~-~~~i~~i~~~~-N~GgaGgF~~a~~--~~~dyVw 259 (932)
++++ .|.-.++++++. ...+|+|+-+...+ ++++.+. ...+.++.... ..|..++...++. ...|+|.
T Consensus 22 ~~g~pll~~~i~~l~~~--~~~~iivv~~~~~~-----~~~~~~~~~~~v~~v~~~~~~~g~~~si~~~l~~~~~~~~vl 94 (188)
T TIGR03310 22 YKGKTILEHVVDNALRL--FFDEVILVLGHEAD-----ELVALLANHSNITLVHNPQYAEGQSSSIKLGLELPVQSDGYL 94 (188)
T ss_pred cCCeeHHHHHHHHHHHc--CCCcEEEEeCCcHH-----HHHHHhccCCCeEEEECcChhcCHHHHHHHHhcCCCCCCEEE
Confidence 4555 477778888754 36778777654332 2333332 23466665432 3455555555654 3578999
Q ss_pred EEcCCC-CCchhHHHHHHhh
Q 046508 260 IVDDDM-IPGRKMLQILSHV 278 (932)
Q Consensus 260 imDDD~-IP~~~~Le~Ll~~ 278 (932)
+++=|+ .-+++.++++++.
T Consensus 95 v~~~D~P~i~~~~i~~l~~~ 114 (188)
T TIGR03310 95 FLLGDQPFVTPDIIQLLLEA 114 (188)
T ss_pred EEeCCcCCCCHHHHHHHHHH
Confidence 999997 6688889999864
No 170
>PRK15480 glucose-1-phosphate thymidylyltransferase RfbA; Provisional
Probab=37.89 E-value=1.7e+02 Score=32.69 Aligned_cols=96 Identities=10% Similarity=0.182 Sum_probs=64.3
Q ss_pred EEEEEcCCchhHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhc--CCCceEEEecCCCcccccchhhhhh--cC
Q 046508 179 TVILNHFKRKTLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSY--NDSRISFISSSYDFKYYGRFQMALQ--TE 254 (932)
Q Consensus 179 taVVvTYNR~~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~--~~~~i~~i~~~~N~GgaGgF~~a~~--~~ 254 (932)
...++.++|+.+.-.|+.|.+. -+.+|+||.+.-..+ ...+++.+- -..++.|+..+...|-++.+..+.. .+
T Consensus 26 K~Llpv~gkPmI~~~l~~l~~a--Gi~~I~ii~~~~~~~-~~~~~l~~g~~~g~~i~y~~q~~~~Gta~Al~~a~~~i~~ 102 (292)
T PRK15480 26 KQLLPIYDKPMIYYPLSTLMLA--GIRDILIISTPQDTP-RFQQLLGDGSQWGLNLQYKVQPSPDGLAQAFIIGEEFIGG 102 (292)
T ss_pred ceEeEECCEEHHHHHHHHHHHC--CCCEEEEEecCCchH-HHHHHHcCccccCceeEEEECCCCCCHHHHHHHHHHHhCC
Confidence 4567788998888889888765 468898776543221 234555432 1246889988888888888877644 24
Q ss_pred CcEEEEEcCCCCCchhHHHHHHhh
Q 046508 255 ADLVYIVDDDMIPGRKMLQILSHV 278 (932)
Q Consensus 255 ~dyVwimDDD~IP~~~~Le~Ll~~ 278 (932)
.+++.++-|+.+-.. .|..+++.
T Consensus 103 ~~~~lv~gD~i~~~~-~l~~ll~~ 125 (292)
T PRK15480 103 DDCALVLGDNIFYGH-DLPKLMEA 125 (292)
T ss_pred CCEEEEECCeeeecc-CHHHHHHH
Confidence 579999988865433 36666643
No 171
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides.
Probab=37.21 E-value=1.7e+02 Score=29.78 Aligned_cols=87 Identities=11% Similarity=0.106 Sum_probs=57.7
Q ss_pred CCchhHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcC--CCceEEEecCCCcccccchhhhhhc-CCcEEEEE
Q 046508 185 FKRKTLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYN--DSRISFISSSYDFKYYGRFQMALQT-EADLVYIV 261 (932)
Q Consensus 185 YNR~~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~--~~~i~~i~~~~N~GgaGgF~~a~~~-~~dyVwim 261 (932)
-+|+.+.-+|++|.+.- ..+|+|+-+...+ ...+.+.+.. ...+.++..+...|-++....+... ..+++.++
T Consensus 27 ~g~pli~~~l~~l~~~g--~~~i~vv~~~~~~--~i~~~~~~~~~~~~~i~~~~~~~~~g~~~al~~~~~~~~~~~~lv~ 102 (217)
T cd04181 27 AGKPILEYIIERLARAG--IDEIILVVGYLGE--QIEEYFGDGSKFGVNIEYVVQEEPLGTAGAVRNAEDFLGDDDFLVV 102 (217)
T ss_pred CCeeHHHHHHHHHHHCC--CCEEEEEeccCHH--HHHHHHcChhhcCceEEEEeCCCCCccHHHHHHhhhhcCCCCEEEE
Confidence 46766888898887653 6788888776433 2455554431 2457777766667766777666554 57889999
Q ss_pred cCCCCCchhHHHHHH
Q 046508 262 DDDMIPGRKMLQILS 276 (932)
Q Consensus 262 DDD~IP~~~~Le~Ll 276 (932)
.=|++-..+ +..++
T Consensus 103 ~~D~~~~~~-~~~~~ 116 (217)
T cd04181 103 NGDVLTDLD-LSELL 116 (217)
T ss_pred ECCeecCcC-HHHHH
Confidence 999876665 44444
No 172
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=36.66 E-value=2e+02 Score=32.44 Aligned_cols=105 Identities=19% Similarity=0.193 Sum_probs=68.2
Q ss_pred CCCcEEEEEEcCCch-hHHHHHHHHHcCCCCCc--eEEEEeCCCCChhhHHHHHhhc----C--------CCceEEEecC
Q 046508 174 NRPKVTVILNHFKRK-TLCAQLDSLLQQTLPFQ--HVWVLSFGSPNELSLKRIVNSY----N--------DSRISFISSS 238 (932)
Q Consensus 174 ~~~~VtaVVvTYNR~-~L~e~L~aLl~QT~~~~--~IiVvdnaStD~t~t~~~l~~~----~--------~~~i~~i~~~ 238 (932)
++++|-++.|.=|.. .|.+=++.|.++|||-+ .+-.+.+.++.+++|.++|+++ . -..|.++..+
T Consensus 23 ~~e~VLILtplrna~~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~~~~~q~~~~~~~~F~~itIl~~d 102 (269)
T PF03452_consen 23 NKESVLILTPLRNAASFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAALKKLQSHGPESKRFRSITILRKD 102 (269)
T ss_pred cCCeEEEEEecCCchHHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHHHHHHhccCcccCCcceEEEEcCC
Confidence 667788888865654 49999999999999744 5666777777444577777642 1 1366666655
Q ss_pred CCc--cc--------------------ccchhh--hhhcCCcEEEEEcCCCC-CchhHHHHHHhh
Q 046508 239 YDF--KY--------------------YGRFQM--ALQTEADLVYIVDDDMI-PGRKMLQILSHV 278 (932)
Q Consensus 239 ~N~--Gg--------------------aGgF~~--a~~~~~dyVwimDDD~I-P~~~~Le~Ll~~ 278 (932)
+.. |. |-+|.+ ++....+||+.+|=|.+ -+|+-|+.|+..
T Consensus 103 f~~~~~~~~~~RH~~~~Q~~RR~~mAraRN~LL~~aL~p~~swVlWlDaDIv~~P~~lI~dli~~ 167 (269)
T PF03452_consen 103 FGQQLSQDRSERHAFEVQRPRRRAMARARNFLLSSALGPWHSWVLWLDADIVETPPTLIQDLIAH 167 (269)
T ss_pred CcccccCchhhccchhhHHHHHHHHHHHHHHHHHhhcCCcccEEEEEecCcccCChHHHHHHHhC
Confidence 432 11 001222 23347999999999974 445568888754
No 173
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=36.62 E-value=1.9e+02 Score=28.93 Aligned_cols=82 Identities=21% Similarity=0.158 Sum_probs=53.9
Q ss_pred Cch-hHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecC-CCcccccchhhhhh-cCCcEEEEEc
Q 046508 186 KRK-TLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSS-YDFKYYGRFQMALQ-TEADLVYIVD 262 (932)
Q Consensus 186 NR~-~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~-~N~GgaGgF~~a~~-~~~dyVwimD 262 (932)
+++ .|.-+++++.+. ..+|+|+-+.... . ...+ .+.++... ...|-.++...++. ...+++.++.
T Consensus 24 ~g~~ll~~~i~~l~~~---~~~iivv~~~~~~-----~-~~~~---~~~~v~~~~~~~G~~~si~~~l~~~~~~~vlv~~ 91 (181)
T cd02503 24 GGKPLLEHVLERLKPL---VDEVVISANRDQE-----R-YALL---GVPVIPDEPPGKGPLAGILAALRAAPADWVLVLA 91 (181)
T ss_pred CCEEHHHHHHHHHHhh---cCEEEEECCCChH-----H-Hhhc---CCcEeeCCCCCCCCHHHHHHHHHhcCCCeEEEEe
Confidence 444 577778888643 6788888654432 1 1112 24455433 35566666666665 4579999999
Q ss_pred CCC-CCchhHHHHHHhhc
Q 046508 263 DDM-IPGRKMLQILSHVA 279 (932)
Q Consensus 263 DD~-IP~~~~Le~Ll~~~ 279 (932)
=|+ .-+++.++.|++..
T Consensus 92 ~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 92 CDMPFLPPELLERLLAAA 109 (181)
T ss_pred CCcCCCCHHHHHHHHHhh
Confidence 998 67899999998653
No 174
>COG3306 Glycosyltransferase involved in LPS biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=36.42 E-value=27 Score=38.57 Aligned_cols=27 Identities=26% Similarity=0.329 Sum_probs=24.5
Q ss_pred CceEEEEcCCcccChHHHHHHHHHHHH
Q 046508 682 DDFGLLLEDDIEVSPYFYLWIKYALLA 708 (932)
Q Consensus 682 ~s~vIVLEDDlevSP~Fy~Ylk~ALl~ 708 (932)
..|++|||||+.++..|-..+...+..
T Consensus 87 ~~yi~I~EDDV~l~~~f~~~l~~~~~~ 113 (255)
T COG3306 87 LPYILILEDDVVLGEDFEEFLEDDLKL 113 (255)
T ss_pred CCeEEEecccccccccHHHHHHHHHhh
Confidence 359999999999999999999988876
No 175
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=36.12 E-value=2.2e+02 Score=30.96 Aligned_cols=112 Identities=22% Similarity=0.253 Sum_probs=72.4
Q ss_pred ceeEEEEecCCchhHHHHHHHHHhccCC--CCCccEEEEeCCCCC--HHHHHHHHhcCCCCCCcEEEEeccccchhhhhh
Q 046508 598 RISVNIVTQNRVHSLTRLLKSLSNAYYL--GDEVPISFNMDSKVD--EATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVS 673 (932)
Q Consensus 598 ~i~IvIfaynRp~sL~RLL~SL~~AdY~--gd~~~LtI~lD~~~D--~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~Vl 673 (932)
.-.|++=+||--.+|. ++.-|-+.... +..-.+.|-=|.+.| .++.+-|++. ..-.++-|+-|....||-.|.+
T Consensus 4 kYsvilPtYnEk~Nlp-i~~~li~~~~~e~~~~~eiIivDD~SpDGt~~~a~~L~k~-yg~d~i~l~pR~~klGLgtAy~ 81 (238)
T KOG2978|consen 4 KYSVILPTYNEKENLP-IITRLIAKYMSEEGKKYEIIIVDDASPDGTQEVAKALQKI-YGEDNILLKPRTKKLGLGTAYI 81 (238)
T ss_pred ceeEEeccccCCCCCe-eeHHHHHhhhhhhcCceEEEEEeCCCCCccHHHHHHHHHH-hCCCcEEEEeccCcccchHHHH
Confidence 4467777887665555 33333333222 222235554444455 4566666654 2345688999999999988877
Q ss_pred hhcccCCCCceEEEEcCCcccChHHHHHHHHHHHHhcCC
Q 046508 674 ESWYPASDDDFGLLLEDDIEVSPYFYLWIKYALLAYHYD 712 (932)
Q Consensus 674 Esf~P~~~~s~vIVLEDDlevSP~Fy~Ylk~ALl~Y~ys 712 (932)
-+++-. .++|.++++-|+.=-|-|..=+-...-++.|+
T Consensus 82 hgl~~a-~g~fiviMDaDlsHhPk~ipe~i~lq~~~~~d 119 (238)
T KOG2978|consen 82 HGLKHA-TGDFIVIMDADLSHHPKFIPEFIRLQKEGNYD 119 (238)
T ss_pred hhhhhc-cCCeEEEEeCccCCCchhHHHHHHHhhccCcc
Confidence 776532 57899999999999998887776666666555
No 176
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=34.35 E-value=1.6e+02 Score=30.46 Aligned_cols=94 Identities=15% Similarity=0.153 Sum_probs=53.4
Q ss_pred EEEcCCchh---HHHHHHHHHcCCC--CCceEEEEeCCCCChhhHHHHHhhcCC--CceEEEecC---------CCcc--
Q 046508 181 ILNHFKRKT---LCAQLDSLLQQTL--PFQHVWVLSFGSPNELSLKRIVNSYND--SRISFISSS---------YDFK-- 242 (932)
Q Consensus 181 VVvTYNR~~---L~e~L~aLl~QT~--~~~~IiVvdnaStD~t~t~~~l~~~~~--~~i~~i~~~---------~N~G-- 242 (932)
|+.+.|..+ +...+.+|+.-+. ....|+|++++.+++. .+.+++... ..+..+... .+..
T Consensus 2 i~~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (250)
T PF01501_consen 2 IVLACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEED--FEKLRALAAEVIEIEPIEFPDISMLEEFQFNSPSK 79 (250)
T ss_dssp EEEECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHH--HHHHHHHSCCCCTTECEEETSGGHHH--TTS-HCC
T ss_pred EEEEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHH--HHHHhhhcccccceeeeccchHHhhhhhhhccccc
Confidence 555677765 5566888887765 3556888888877653 455554322 122222111 1111
Q ss_pred ------cccchhhhhh-cCCcEEEEEcCCCCCchhHHHHHHh
Q 046508 243 ------YYGRFQMALQ-TEADLVYIVDDDMIPGRKMLQILSH 277 (932)
Q Consensus 243 ------gaGgF~~a~~-~~~dyVwimDDD~IP~~~~Le~Ll~ 277 (932)
...+|..+-. .++|-|..+|.|+|... -|++|.+
T Consensus 80 ~~~~~~~~~rl~i~~ll~~~drilyLD~D~lv~~-dl~~lf~ 120 (250)
T PF01501_consen 80 RHFSPATFARLFIPDLLPDYDRILYLDADTLVLG-DLDELFD 120 (250)
T ss_dssp TCGGGGGGGGGGHHHHSTTSSEEEEE-TTEEESS--SHHHHC
T ss_pred ccccHHHHHHhhhHHHHhhcCeEEEEcCCeeeec-Chhhhhc
Confidence 2234444444 68999999999998854 4666654
No 177
>TIGR01207 rmlA glucose-1-phosphate thymidylyltransferase, short form. This model describes a tightly conserved but broadly distributed subfamily (here designated as short form) of known and putative bacterial glucose-1-phosphate thymidylyltransferases. It is well characterized in several species as the first of four enzymes involved in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.
Probab=32.60 E-value=2.1e+02 Score=31.85 Aligned_cols=96 Identities=10% Similarity=0.160 Sum_probs=62.1
Q ss_pred EEEEEcCCchhHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhc--CCCceEEEecCCCcccccchhhhhh--cC
Q 046508 179 TVILNHFKRKTLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSY--NDSRISFISSSYDFKYYGRFQMALQ--TE 254 (932)
Q Consensus 179 taVVvTYNR~~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~--~~~~i~~i~~~~N~GgaGgF~~a~~--~~ 254 (932)
...++.++|+.+.-.|+.|... .+.+|+||......+ ...+.+.+. -+-+|.|+..++..|-++.+..+.. .+
T Consensus 22 K~Llpv~gkPmI~~~L~~l~~a--Gi~~I~iv~~~~~~~-~~~~~lg~g~~~g~~i~~~~q~~~~Gta~al~~a~~~l~~ 98 (286)
T TIGR01207 22 KQLLPIYDKPMIYYPLSTLMLA--GIRDILIISTPQDTP-RFQQLLGDGSQWGVNLSYAVQPSPDGLAQAFIIGEDFIGG 98 (286)
T ss_pred ceeeEECCEEhHHHHHHHHHHC--CCCEEEEEecCCcHH-HHHHHhccccccCceEEEEEccCCCCHHHHHHHHHHHhCC
Confidence 4567778998888889888765 367888776432211 234444331 1236888888888888888877755 24
Q ss_pred CcEEEEEcCCCCCchhHHHHHHhh
Q 046508 255 ADLVYIVDDDMIPGRKMLQILSHV 278 (932)
Q Consensus 255 ~dyVwimDDD~IP~~~~Le~Ll~~ 278 (932)
.+++.++-|+.+-. ..+..+++.
T Consensus 99 ~~~~li~gD~i~~~-~~l~~ll~~ 121 (286)
T TIGR01207 99 DPSALVLGDNIFYG-HDLSDLLKR 121 (286)
T ss_pred CCEEEEECCEeccc-cCHHHHHHH
Confidence 67888887776533 446666543
No 178
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B ....
Probab=32.40 E-value=2.1e+02 Score=27.84 Aligned_cols=85 Identities=15% Similarity=0.175 Sum_probs=59.0
Q ss_pred Cch-hHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecC-CCcccccchhhhhhc--CCcEEEEE
Q 046508 186 KRK-TLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSS-YDFKYYGRFQMALQT--EADLVYIV 261 (932)
Q Consensus 186 NR~-~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~-~N~GgaGgF~~a~~~--~~dyVwim 261 (932)
+.+ .|..+|+.+.+. .+.+|+|+-+. ++ ..+.+..+ .++++... .+.|..++...++.. ..++|+|+
T Consensus 22 ~g~~li~~~l~~l~~~--~~~~Ivvv~~~--~~--~~~~~~~~---~~~~v~~~~~~~G~~~sl~~a~~~~~~~~~vlv~ 92 (160)
T PF12804_consen 22 GGKPLIERVLEALREA--GVDDIVVVTGE--EE--IYEYLERY---GIKVVVDPEPGQGPLASLLAALSQLPSSEPVLVL 92 (160)
T ss_dssp TTEEHHHHHHHHHHHH--TESEEEEEEST--HH--HHHHHTTT---TSEEEE-STSSCSHHHHHHHHHHTSTTSSEEEEE
T ss_pred CCccHHHHHHHHhhcc--CCceEEEecCh--HH--HHHHHhcc---CceEEEeccccCChHHHHHHHHHhcccCCCcEEE
Confidence 454 588888888544 36889998887 22 24444333 46666654 467777787777664 69999999
Q ss_pred cCCC-CCchhHHHHHHhhc
Q 046508 262 DDDM-IPGRKMLQILSHVA 279 (932)
Q Consensus 262 DDD~-IP~~~~Le~Ll~~~ 279 (932)
-=|+ ..+++.|+.|++..
T Consensus 93 ~~D~p~~~~~~l~~l~~~~ 111 (160)
T PF12804_consen 93 PCDQPFLSPELLRRLLEAL 111 (160)
T ss_dssp ETTETTS-HHHHHHHHHHH
T ss_pred eCCccccCHHHHHHHHHHH
Confidence 9998 56999999998764
No 179
>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis. The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of Neisseria gonorrhoeae and Lic2A of Haemophilus influenzae. M. catarrhalis Lgt2 catalyzes the addition of galactose (Gal) to the growing chain of LOS on the cell surface. N. gonorrhoeae LgtB and LgtE link Gal-beta(1,4) to GlcNAc (N-acetylglucosamine) and Glc (glucose), respectively. The genes encoding LgtB and LgtE are two genes of a five gene locus involved in the synthesis of gonococcal LOS. LgtE is believed to perform the first step in LOS biosynthesis.
Probab=32.38 E-value=55 Score=31.80 Aligned_cols=17 Identities=35% Similarity=0.665 Sum_probs=15.4
Q ss_pred CCceEEEEcCCcccChH
Q 046508 681 DDDFGLLLEDDIEVSPY 697 (932)
Q Consensus 681 ~~s~vIVLEDDlevSP~ 697 (932)
..+++||||||+.++|.
T Consensus 82 ~~~~alIlEDDv~~~~~ 98 (128)
T cd06532 82 NLEYALILEDDAILDPD 98 (128)
T ss_pred CCCeEEEEccCcEECCC
Confidence 45899999999999999
No 180
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=31.65 E-value=2e+02 Score=30.85 Aligned_cols=96 Identities=11% Similarity=0.137 Sum_probs=59.9
Q ss_pred EEEEcCCch---hHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhc---CCCceEEEecCC--C-----------
Q 046508 180 VILNHFKRK---TLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSY---NDSRISFISSSY--D----------- 240 (932)
Q Consensus 180 aVVvTYNR~---~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~---~~~~i~~i~~~~--N----------- 240 (932)
+|+++-+.. .+.-.|.||+.-+....+++|+.++-+++. .+.+++. ....+.++.-.. .
T Consensus 3 i~~~a~d~~y~~~~~v~i~Sl~~~~~~~~~~~il~~~is~~~--~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 80 (246)
T cd00505 3 IVIVATGDEYLRGAIVLMKSVLRHRTKPLRFHVLTNPLSDTF--KAALDNLRKLYNFNYELIPVDILDSVDSEHLKRPIK 80 (246)
T ss_pred EEEEecCcchhHHHHHHHHHHHHhCCCCeEEEEEEccccHHH--HHHHHHHHhccCceEEEEeccccCcchhhhhcCccc
Confidence 455555543 377779999987665677999998866543 5566553 123455555421 1
Q ss_pred cccccchhhhhhc-CCcEEEEEcCCCCCchhHHHHHHhh
Q 046508 241 FKYYGRFQMALQT-EADLVYIVDDDMIPGRKMLQILSHV 278 (932)
Q Consensus 241 ~GgaGgF~~a~~~-~~dyVwimDDD~IP~~~~Le~Ll~~ 278 (932)
...+.||....-. ..|=|..+|.|+|.. +-|++|.+.
T Consensus 81 ~~~y~RL~i~~llp~~~kvlYLD~D~iv~-~di~~L~~~ 118 (246)
T cd00505 81 IVTLTKLHLPNLVPDYDKILYVDADILVL-TDIDELWDT 118 (246)
T ss_pred cceeHHHHHHHHhhccCeEEEEcCCeeec-cCHHHHhhc
Confidence 1123444443223 488999999999988 457777654
No 181
>TIGR00466 kdsB 3-deoxy-D-manno-octulosonate cytidylyltransferase.
Probab=31.09 E-value=2.9e+02 Score=29.69 Aligned_cols=86 Identities=8% Similarity=0.083 Sum_probs=56.0
Q ss_pred CCch-hHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEe-cCCCcccccchhhhhhc----CCcEE
Q 046508 185 FKRK-TLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFIS-SSYDFKYYGRFQMALQT----EADLV 258 (932)
Q Consensus 185 YNR~-~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~-~~~N~GgaGgF~~a~~~----~~dyV 258 (932)
.+++ .|.-+++++.+ . .+++|+|+-+ +....++++++. +.++. .....||..|...++.. +.|+|
T Consensus 21 l~GkPli~~~le~~~~-~-~~d~VvVvt~----~~~i~~~~~~~g---~~~v~~~~~~~~Gt~r~~~~~~~l~~~~~d~V 91 (238)
T TIGR00466 21 IFGKPMIVHVAENANE-S-GADRCIVATD----DESVAQTCQKFG---IEVCMTSKHHNSGTERLAEVVEKLALKDDERI 91 (238)
T ss_pred cCCcCHHHHHHHHHHh-C-CCCeEEEEeC----HHHHHHHHHHcC---CEEEEeCCCCCChhHHHHHHHHHhCCCCCCEE
Confidence 3454 58888988764 3 4888888754 222345555443 33333 34445666666655432 57899
Q ss_pred EEEcCCC-CCchhHHHHHHhhc
Q 046508 259 YIVDDDM-IPGRKMLQILSHVA 279 (932)
Q Consensus 259 wimDDD~-IP~~~~Le~Ll~~~ 279 (932)
.++|=|. .-.++.|+++++..
T Consensus 92 li~~gD~Pli~~~~I~~li~~~ 113 (238)
T TIGR00466 92 VNLQGDEPFIPKEIIRQVADNL 113 (238)
T ss_pred EEEcCCcCcCCHHHHHHHHHHH
Confidence 9999996 78899999998764
No 182
>cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline. This family contains proteins similar to prokaryotic phosphocholine (P-cho) cytidylyltransferases. Phosphocholine (PC) cytidylyltransferases catalyze the transfer of a cytidine monophosphate from CTP to phosphocholine to form CDP-choline. PC is the most abundant phospholipid in eukaryotic membranes and it is also important in prokaryotic membranes. For pathogenic prokaryotes, the cell surface PC facilitates the interaction with host surface and induces attachment and invasion. In addition cell wall PC serves as scaffold for a group of choline-binding proteins that are secreted from the cells. Phosphocholine (PC) cytidylyltransferase is a key enzyme in the prokaryotic choline metabolism pathway. It has been hypothesized to consist of a choline transport system, a choline kinase, CTP:phosphocholine cytidylyltransferase, and a choline phosphotransferase that transfers P-Cho from CDP
Probab=30.83 E-value=2.5e+02 Score=29.20 Aligned_cols=87 Identities=11% Similarity=0.192 Sum_probs=55.5
Q ss_pred CCchhHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCC--CcccccchhhhhhcCCcEEEEEc
Q 046508 185 FKRKTLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSY--DFKYYGRFQMALQTEADLVYIVD 262 (932)
Q Consensus 185 YNR~~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~--N~GgaGgF~~a~~~~~dyVwimD 262 (932)
-+|+.+.-.|++|.+. ...+|+|+-+. ......+.+.++ ..+.++..+. ..|-++.+..+...-.+++.|+.
T Consensus 27 ~g~~li~~~l~~l~~~--gi~~i~vv~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~lv~~ 100 (229)
T cd02523 27 NGKPLLERQIETLKEA--GIDDIVIVTGY--KKEQIEELLKKY--PNIKFVYNPDYAETNNIYSLYLARDFLDEDFLLLE 100 (229)
T ss_pred CCEEHHHHHHHHHHHC--CCceEEEEecc--CHHHHHHHHhcc--CCeEEEeCcchhhhCcHHHHHHHHHHcCCCEEEEe
Confidence 3566677778888765 46788888764 222234444332 3466665543 45555556555443257788899
Q ss_pred CCCCCchhHHHHHHh
Q 046508 263 DDMIPGRKMLQILSH 277 (932)
Q Consensus 263 DD~IP~~~~Le~Ll~ 277 (932)
=|++-.++.++.+++
T Consensus 101 ~D~~~~~~~~~~~~~ 115 (229)
T cd02523 101 GDVVFDPSILERLLS 115 (229)
T ss_pred CCEecCHHHHHHHHc
Confidence 998888888888874
No 183
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=30.65 E-value=3.8e+02 Score=27.64 Aligned_cols=87 Identities=15% Similarity=0.118 Sum_probs=54.7
Q ss_pred CchhHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCCcccccchhhhhhc-C--CcEEEEEc
Q 046508 186 KRKTLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYDFKYYGRFQMALQT-E--ADLVYIVD 262 (932)
Q Consensus 186 NR~~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N~GgaGgF~~a~~~-~--~dyVwimD 262 (932)
+|+.|.-+|++|.+. ...+|+|+-. .+.....+++.+ ..+.++..+...|-++....++.. . .|+|.+++
T Consensus 25 gkpli~~~i~~l~~~--~i~~i~iv~~--~~~~~i~~~~~~---~~~~~~~~~~~~g~~~ai~~a~~~~~~~~~~vli~~ 97 (229)
T cd02540 25 GKPMLEHVLDAARAL--GPDRIVVVVG--HGAEQVKKALAN---PNVEFVLQEEQLGTGHAVKQALPALKDFEGDVLVLY 97 (229)
T ss_pred CccHHHHHHHHHHhC--CCCeEEEEEC--CCHHHHHHHhCC---CCcEEEECCCCCCCHHHHHHHHHhhccCCCeEEEEe
Confidence 555688889998764 3567666664 233223344433 346667666555655555555432 2 68999999
Q ss_pred CCC-CCchhHHHHHHhhc
Q 046508 263 DDM-IPGRKMLQILSHVA 279 (932)
Q Consensus 263 DD~-IP~~~~Le~Ll~~~ 279 (932)
=|+ +-.+..+.++++..
T Consensus 98 ~D~p~~~~~~i~~l~~~~ 115 (229)
T cd02540 98 GDVPLITPETLQRLLEAH 115 (229)
T ss_pred CCccccCHHHHHHHHHHH
Confidence 997 56788898887653
No 184
>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases. WcbM protein of Burkholderia mallei is involved in the biosynthesis, export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars.
Probab=30.28 E-value=2.8e+02 Score=28.22 Aligned_cols=98 Identities=16% Similarity=0.101 Sum_probs=57.4
Q ss_pred CCCcEEEEEEcCCchhHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcC--CCceEEEecCCCcccccchhhhh
Q 046508 174 NRPKVTVILNHFKRKTLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYN--DSRISFISSSYDFKYYGRFQMAL 251 (932)
Q Consensus 174 ~~~~VtaVVvTYNR~~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~--~~~i~~i~~~~N~GgaGgF~~a~ 251 (932)
+.||--+=|. +++.|.-.|+.|.+. ...+|+|+-+...+ .+.+.+.... ...+.+.......|-++....++
T Consensus 18 ~~pK~ll~i~--g~pli~~~l~~l~~~--g~~~v~vv~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~~a~ 91 (223)
T cd06915 18 DLPKPLAPVA--GRPFLEYLLEYLARQ--GISRIVLSVGYLAE--QIEEYFGDGYRGGIRIYYVIEPEPLGTGGAIKNAL 91 (223)
T ss_pred CCCccccEEC--CcchHHHHHHHHHHC--CCCEEEEEcccCHH--HHHHHHcCccccCceEEEEECCCCCcchHHHHHHH
Confidence 3444333333 566688888888765 36778887764332 2455555321 22455655555666666666665
Q ss_pred hc-CCcEEEEEcCCCCCchhHHHHHHhh
Q 046508 252 QT-EADLVYIVDDDMIPGRKMLQILSHV 278 (932)
Q Consensus 252 ~~-~~dyVwimDDD~IP~~~~Le~Ll~~ 278 (932)
+. ..+.+.++.=|++-.. .+..+++.
T Consensus 92 ~~~~~~~~lv~~~D~~~~~-~~~~~l~~ 118 (223)
T cd06915 92 PKLPEDQFLVLNGDTYFDV-DLLALLAA 118 (223)
T ss_pred hhcCCCCEEEEECCcccCC-CHHHHHHH
Confidence 53 4677888888875443 46666543
No 185
>PLN02400 cellulose synthase
Probab=29.43 E-value=1.4e+02 Score=39.47 Aligned_cols=143 Identities=15% Similarity=0.223 Sum_probs=82.9
Q ss_pred HHHHHHHHHc--CCCCCceEEEEeCCCC-------ChhhHHHHHhhc---------CCCceEEEecCCCcccccch----
Q 046508 190 LCAQLDSLLQ--QTLPFQHVWVLSFGSP-------NELSLKRIVNSY---------NDSRISFISSSYDFKYYGRF---- 247 (932)
Q Consensus 190 L~e~L~aLl~--QT~~~~~IiVvdnaSt-------D~t~t~~~l~~~---------~~~~i~~i~~~~N~GgaGgF---- 247 (932)
+|..|++|.+ |.. +.+.|.+.|++. |..+.-+++-+. .-+++.||.-++.-|+.=.|
T Consensus 466 ~k~RIe~l~~~~~~~-~~~~~~m~dgt~W~g~~~~dHp~iIqVll~~~~~~d~~g~~LP~LVYVSREKRP~~~Hh~KAGA 544 (1085)
T PLN02400 466 FKVRINALVAKAQKI-PEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGA 544 (1085)
T ss_pred HHHHHHHHHhhhccC-CccccccccCccCCCCCCCCCchhhhhhhcCCCCcccccccCceeEEEeccCCCCCCcchhhhh
Confidence 9999999973 333 455677777662 443233444221 11689999988877742222
Q ss_pred --hh----hhhcCCcEEEEEcCCCCC-chhHHHHHHhhccccccccccccccccc---cccCCCCCCCcccccccccccC
Q 046508 248 --QM----ALQTEADLVYIVDDDMIP-GRKMLQILSHVAGTEKYKNSVLGSIGRI---LPFRQKDFTFPSYRKFRSKEAG 317 (932)
Q Consensus 248 --~~----a~~~~~dyVwimDDD~IP-~~~~Le~Ll~~~g~~~~~~~vlgs~G~~---vPf~~~d~~f~~y~~~~s~~~g 317 (932)
.+ |+...+.||.=+|=|+.. .+.++.+.|=. -.|.- .|+- |=|+|+ |..- .++
T Consensus 545 MNaLlRVSavmTNaP~ILNlDCDmY~Nns~a~r~AMCf-~lD~~-------~g~~~afVQFPQr---F~gi------~~~ 607 (1085)
T PLN02400 545 MNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCF-MMDPA-------IGKKTCYVQFPQR---FDGI------DLH 607 (1085)
T ss_pred hHHHHHHhhhhcCCceEEecccccccCCchhHHhhhhh-eeccC-------CCceeEEEeCCcc---cCCC------CCC
Confidence 22 567799999999999855 88888877622 11111 2322 556665 2111 111
Q ss_pred cCCCCCCCCc--------cccceEEeccccccccccHHHHHHh
Q 046508 318 LYLPDPAYDI--------TVDKIVQVDFLSSSWFLSAELVKTL 352 (932)
Q Consensus 318 ~~~p~~~y~~--------~~~rl~~~d~l~~~wf~~re~l~~~ 352 (932)
| +-.+.|. ..+-+.---++|.+||+||+.|-=+
T Consensus 608 D--~Y~n~~~vffdi~~~GldGlqGP~YvGTGC~frR~aLYG~ 648 (1085)
T PLN02400 608 D--RYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGY 648 (1085)
T ss_pred C--CcccceeEEeeccccccccCCCccccccCcceeeeeeccC
Confidence 1 1000011 2233444457899999999998755
No 186
>KOG2287 consensus Galactosyltransferases [Carbohydrate transport and metabolism]
Probab=28.70 E-value=5.1e+02 Score=29.89 Aligned_cols=184 Identities=16% Similarity=0.265 Sum_probs=101.9
Q ss_pred cccHHHHHccccccccCCC-CCCcEEEEEEc--CCchhHHHHHHHHHcCCC-CCceEEEEeCCCCChhhHHHHHhhcCCC
Q 046508 155 TETLNELMAMKSKWDLKGP-NRPKVTVILNH--FKRKTLCAQLDSLLQQTL-PFQHVWVLSFGSPNELSLKRIVNSYNDS 230 (932)
Q Consensus 155 ~~~~~~~~~~~s~~~~~~~-~~~~VtaVVvT--YNR~~L~e~L~aLl~QT~-~~~~IiVvdnaStD~t~t~~~l~~~~~~ 230 (932)
+....+=+.++.+|.-++. ...+|.++... =.++. .+++++++.. ...+||++|.-=+=..-|-+.+.-.
T Consensus 105 ~~~farR~aiR~TW~~~~~v~~~~v~~~FLvG~~~~~~---~~~~~l~~Ea~~ygDIi~~df~Dty~nltlKtl~~l--- 178 (349)
T KOG2287|consen 105 PDNFARRNAIRKTWGNENNVRGGRVRVLFLVGLPSNED---KLNKLLADEARLYGDIIQVDFEDTYFNLTLKTLAIL--- 178 (349)
T ss_pred CCCHHHHHHHHHHhcCccccCCCcEEEEEEecCCCcHH---HHHHHHHHHHHHhCCEEEEecccchhchHHHHHHHH---
Confidence 3445555666667777765 22334444432 23233 4466666644 3567888887554332222222100
Q ss_pred ceEEEecCCCcccccchhhhhhcCCcEEEEEcCCCCCchhHHHHHHhhccccccccccccccccc----cccCCCCCCCc
Q 046508 231 RISFISSSYDFKYYGRFQMALQTEADLVYIVDDDMIPGRKMLQILSHVAGTEKYKNSVLGSIGRI----LPFRQKDFTFP 306 (932)
Q Consensus 231 ~i~~i~~~~N~GgaGgF~~a~~~~~dyVwimDDD~IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~----vPf~~~d~~f~ 306 (932)
.|.......++||-=.|||++-.++.|-+++.... +.-... ..|++ .|.+.+++
T Consensus 179 ---------------~w~~~~cp~akfi~K~DDDvfv~~~~L~~~L~~~~-~~~~~~---~~G~v~~~~~p~R~~~~--- 236 (349)
T KOG2287|consen 179 ---------------LWGVSKCPDAKFILKIDDDVFVNPDNLLEYLDKLN-DPSSDL---YYGRVIQNAPPIRDKTS--- 236 (349)
T ss_pred ---------------HHHHhcCCcceEEEeccCceEEcHHHHHHHHhccC-CCCcce---EEEeecccCCCCCCCCC---
Confidence 11111123699999999999999999888886542 222222 23443 34433322
Q ss_pred ccccccccccCcCCCCCCCCccccceEEeccc-cccccccHHHHHHhhcc-CCCcccchhhHHHHHHHHHhcCCCe
Q 046508 307 SYRKFRSKEAGLYLPDPAYDITVDKIVQVDFL-SSSWFLSAELVKTLFIE-TPFTFMTGEDLHLSYQLQKYRNAGS 380 (932)
Q Consensus 307 ~y~~~~s~~~g~~~p~~~y~~~~~rl~~~d~l-~~~wf~~re~l~~~f~E-~~~~~~t~eDlhLs~~~~ky~~i~~ 380 (932)
| +|+|...|..+ ..-.|. |...++.++.++.+-.+ +..-+-..||.-+-.-+++-.||.-
T Consensus 237 -------K---wyVp~~~y~~~----~YP~Y~sG~gYvis~~~a~~l~~~s~~~~~~~iEDV~~g~~l~~~~gi~~ 298 (349)
T KOG2287|consen 237 -------K---WYVPESEYPCS----VYPPYASGPGYVISGDAARRLLKASKHLKFFPIEDVFVGGCLAEDLGIKP 298 (349)
T ss_pred -------C---CccCHHHCCCC----CCCCcCCCceeEecHHHHHHHHHHhcCCCccchHHHHHHHHHHHhcCCCc
Confidence 1 23444444432 122233 55678899999999765 2333334899999888888446654
No 187
>PLN02436 cellulose synthase A
Probab=28.64 E-value=50 Score=43.12 Aligned_cols=143 Identities=15% Similarity=0.212 Sum_probs=80.7
Q ss_pred HHHHHHHHHc--CCCCCceEEEEeCCCC-------ChhhHHHHHhh------------cCCCceEEEecCCCcccccch-
Q 046508 190 LCAQLDSLLQ--QTLPFQHVWVLSFGSP-------NELSLKRIVNS------------YNDSRISFISSSYDFKYYGRF- 247 (932)
Q Consensus 190 L~e~L~aLl~--QT~~~~~IiVvdnaSt-------D~t~t~~~l~~------------~~~~~i~~i~~~~N~GgaGgF- 247 (932)
+|..|++|.+ |.+ +.+.|++.|++. |. ..+|+= ..-+++.||.-+++-|+.=.|
T Consensus 475 ~K~RIe~l~~~~~~v-p~~~~~m~dgt~W~g~~~~dH---p~IIqVll~~~~~~d~~g~~LP~LVYVSREKRPg~~Hh~K 550 (1094)
T PLN02436 475 FKVKINALVATAQKV-PEDGWTMQDGTPWPGNNVRDH---PGMIQVFLGHSGVRDVEGNELPRLVYVSREKRPGFDHHKK 550 (1094)
T ss_pred HHHHHHHHHhhcccC-chhhhhhccCccCCCCCCCCC---ccceEEEecCCCCcccccccCceEEEEecccCCCCCcchh
Confidence 9999999986 544 344455555541 22 123321 112689999988777642222
Q ss_pred -----hh----hhhcCCcEEEEEcCCC-CCchhHHHHHHhhccccccccccccccccccccCCCCCCCcccccccccccC
Q 046508 248 -----QM----ALQTEADLVYIVDDDM-IPGRKMLQILSHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAG 317 (932)
Q Consensus 248 -----~~----a~~~~~dyVwimDDD~-IP~~~~Le~Ll~~~g~~~~~~~vlgs~G~~vPf~~~d~~f~~y~~~~s~~~g 317 (932)
.+ |+...+.||.=+|=|+ |..+.++.+.|=. -.|.-. |..=..|=|+|+ |..- .++
T Consensus 551 AGAMNaLlRVSavmTNaP~ILNLDCDmYiNns~a~r~AMCf-llD~~~----g~~~afVQFPQr---F~gi------~k~ 616 (1094)
T PLN02436 551 AGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKALREAMCF-MMDPQS----GKKICYVQFPQR---FDGI------DRH 616 (1094)
T ss_pred hhhhhhhhhhheeecCCceEEecccccccCchHHHHHhhhh-hcCCcc----CCeeEEEcCCcc---cCCC------CCC
Confidence 21 4567899999999998 9999998887632 111111 111111456665 2111 111
Q ss_pred cCCCCCCCCc--------cccceEEeccccccccccHHHHHHh
Q 046508 318 LYLPDPAYDI--------TVDKIVQVDFLSSSWFLSAELVKTL 352 (932)
Q Consensus 318 ~~~p~~~y~~--------~~~rl~~~d~l~~~wf~~re~l~~~ 352 (932)
| |-.+.|. ..+-+.---++|.+||+||+.|--+
T Consensus 617 D--~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG~ 657 (1094)
T PLN02436 617 D--RYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGY 657 (1094)
T ss_pred C--cccccceEeeeccccccccCCCccccccCceeeeeeeecc
Confidence 1 1000011 2233444457899999999988765
No 188
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=28.61 E-value=1.7e+02 Score=34.66 Aligned_cols=144 Identities=21% Similarity=0.221 Sum_probs=88.5
Q ss_pred HHHHHHHHHhhhhccCCce---EEEcCCCccccccccccCCcccccCcCC----CceeEEEEecC-CchhHHHHHHHHHh
Q 046508 550 SNVKKALKMATETKSNGTT---LVLLPRPSITKVLWMADLRSAALPNWNR----MRISVNIVTQN-RVHSLTRLLKSLSN 621 (932)
Q Consensus 550 ~~~~~a~~~a~~~~~~~~~---~I~LP~~~~~~~~Wia~Ld~~sL~aWnk----~~i~IvIfayn-Rp~sL~RLL~SL~~ 621 (932)
+.|..|++.+-+.-+.++. .|.+.++ +.+|....-++|+- ++..|+|+-.| .=..|-|+..|.-.
T Consensus 108 pe~k~a~~AsekEfGfN~~~SDmISm~R~-------v~D~R~EECkhWdYpe~Lpt~SVviVFHNEGws~LmRTVHSVi~ 180 (603)
T KOG3737|consen 108 PEFKQAIQASEKEFGFNMVASDMISMDRN-------VNDLRQEECKHWDYPENLPTSSVVIVFHNEGWSTLMRTVHSVIK 180 (603)
T ss_pred hhHHHHHHHHHHhhCcceeehhhhhcccC-------ccccCHhhccccCCcccCCcceEEEEEecCccHHHHHHHHHHHh
Confidence 4577777654332233332 3445442 35677888889964 45566554444 55788899998865
Q ss_pred ccCCCCCccEEEEeCCCCC-----HHHHHHHHhcCCCCCCcEEEEeccccchhhhhhhhcccCC-CCceEEEEcCCcccC
Q 046508 622 AYYLGDEVPISFNMDSKVD-----EATIKLVSTFDWPHGPKTLRRRIIQGGLIRAVSESWYPAS-DDDFGLLLEDDIEVS 695 (932)
Q Consensus 622 AdY~gd~~~LtI~lD~~~D-----~~~~~~l~~f~WP~g~vtlr~Ri~n~GLir~VlEsf~P~~-~~s~vIVLEDDlevS 695 (932)
-.... -++=+|-+|...| +.+-+|+..|+ |-+.+.+-.++-||+++= |.-... ..+.+|.|+-+.||.
T Consensus 181 RsP~~-~l~eivlvDDfSdKehLkekLDeYv~~fn---GlVkV~Rne~REGLI~aR--SiGA~~atGeV~ifLDAHCEVn 254 (603)
T KOG3737|consen 181 RSPRK-YLAEIVLVDDFSDKEHLKEKLDEYVKLFN---GLVKVFRNERREGLIQAR--SIGAQKATGEVLIFLDAHCEVN 254 (603)
T ss_pred cCcHH-hhheEEEeccCCccHHHHHHHHHHHHHhc---CEEEEEecchhhhhhhhh--ccchhhccccEEEEEecceeee
Confidence 53211 1222344453333 46667888774 778899999999997752 211111 346789999999999
Q ss_pred hHHHHHHHHHH
Q 046508 696 PYFYLWIKYAL 706 (932)
Q Consensus 696 P~Fy~Ylk~AL 706 (932)
-++|.=+-.-|
T Consensus 255 tNWlpPLlAPI 265 (603)
T KOG3737|consen 255 TNWLPPLLAPI 265 (603)
T ss_pred ccccccccccc
Confidence 99886654433
No 189
>cd02518 GT2_SpsF SpsF is a glycosyltrnasferase implicated in the synthesis of the spore coat. Spore coat polysaccharide biosynthesis protein F (spsF) is a glycosyltransferase implicated in the synthesis of the spore coat in a variety of bacteria challenged by stress as starvation. The spsF gene is expressed in the late stage of coat development responsible for a terminal step in coat formation that involves the glycosylation of the coat. SpsF gene mutation resulted in spores that appeared normal. But, the spores tended to aggregate and had abnormal adsorption properties, indicating a surface alteration.
Probab=28.05 E-value=2.5e+02 Score=29.58 Aligned_cols=91 Identities=15% Similarity=0.237 Sum_probs=55.9
Q ss_pred cCCchh-HHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCCcccccchhhhhh-cCCcEEEEE
Q 046508 184 HFKRKT-LCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYDFKYYGRFQMALQ-TEADLVYIV 261 (932)
Q Consensus 184 TYNR~~-L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N~GgaGgF~~a~~-~~~dyVwim 261 (932)
.++++. |.-+|+++.+.. .+.+|+|+-+.........+++..+ .+.++..+.. ++-+++..+++ .+.|+|.++
T Consensus 20 ~l~Gkpli~~~i~~l~~~~-~~~~ivVv~~~~~~~~~i~~~~~~~---~v~~v~~~~~-~~l~~~~~~~~~~~~d~vli~ 94 (233)
T cd02518 20 PLGGKPLLEHLLDRLKRSK-LIDEIVIATSTNEEDDPLEALAKKL---GVKVFRGSEE-DVLGRYYQAAEEYNADVVVRI 94 (233)
T ss_pred ccCCccHHHHHHHHHHhCC-CCCeEEEECCCCcccHHHHHHHHHc---CCeEEECCch-hHHHHHHHHHHHcCCCEEEEe
Confidence 355554 777788886432 2678888877665211234444332 3555554432 33334443443 468999999
Q ss_pred cCCC-CCchhHHHHHHhhc
Q 046508 262 DDDM-IPGRKMLQILSHVA 279 (932)
Q Consensus 262 DDD~-IP~~~~Le~Ll~~~ 279 (932)
+=|+ .-.+..++++++..
T Consensus 95 ~~D~P~i~~~~i~~li~~~ 113 (233)
T cd02518 95 TGDCPLIDPEIIDAVIRLF 113 (233)
T ss_pred CCCCCCCCHHHHHHHHHHH
Confidence 9997 77889999998653
No 190
>cd02517 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide. CMP-KDO Synthetase: 3-Deoxy-D-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) catalyzes the conversion of CTP and 3-deoxy-D-manno-octulosonate into CMP-3-deoxy-D-manno-octulosonate (CMP-KDO) and pyrophosphate. KDO is an essential component of the lipopolysaccharide found in the outer surface of gram-negative eubacteria. It is also a constituent of the capsular polysaccharides of some gram-negative eubacteria. Its presence in the cell wall polysaccharides of green algae and plant were also discovered. However, they have not been found in yeast and animals. The absence of the enzyme in mammalian cells makes it an attractive target molecule for drug design.
Probab=28.03 E-value=4.3e+02 Score=27.70 Aligned_cols=85 Identities=15% Similarity=0.131 Sum_probs=53.1
Q ss_pred CchhHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEe-cCCCcccccchhhhhh-cCC--cEEEEE
Q 046508 186 KRKTLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFIS-SSYDFKYYGRFQMALQ-TEA--DLVYIV 261 (932)
Q Consensus 186 NR~~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~-~~~N~GgaGgF~~a~~-~~~--dyVwim 261 (932)
+|+.|.-.|++|.+.. .+.+|+|+-+. + ...+++.++. +.++. .....+|.|+...++. ... |.+.++
T Consensus 25 gkpll~~~l~~l~~~~-~i~~ivvv~~~---~-~i~~~~~~~~---~~~~~~~~~~~~gt~~~~~~~~~~~~~~d~vlv~ 96 (239)
T cd02517 25 GKPMIQHVYERAKKAK-GLDEVVVATDD---E-RIADAVESFG---GKVVMTSPDHPSGTDRIAEVAEKLDADDDIVVNV 96 (239)
T ss_pred CcCHHHHHHHHHHhCC-CCCEEEEECCc---H-HHHHHHHHcC---CEEEEcCcccCchhHHHHHHHHhcCCCCCEEEEe
Confidence 4556788898887542 36778876432 2 2456665442 33433 2333445566655543 333 889999
Q ss_pred cCCC-CCchhHHHHHHhh
Q 046508 262 DDDM-IPGRKMLQILSHV 278 (932)
Q Consensus 262 DDD~-IP~~~~Le~Ll~~ 278 (932)
+=|+ +-.+..|+++++.
T Consensus 97 ~gD~Pli~~~~l~~l~~~ 114 (239)
T cd02517 97 QGDEPLIPPEMIDQVVAA 114 (239)
T ss_pred cCCCCCCCHHHHHHHHHH
Confidence 9997 7788999999864
No 191
>PRK13368 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional
Probab=28.00 E-value=4e+02 Score=27.95 Aligned_cols=87 Identities=15% Similarity=0.206 Sum_probs=55.3
Q ss_pred Cch-hHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCCcccccchhhhhh-cCCcEEEEEcC
Q 046508 186 KRK-TLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYDFKYYGRFQMALQ-TEADLVYIVDD 263 (932)
Q Consensus 186 NR~-~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N~GgaGgF~~a~~-~~~dyVwimDD 263 (932)
+++ .|.-.|+++.+.. .+.+|+|+-|. + .+.++++++. ..+ +++.+...|+.++...+.. .+.|.+.+++=
T Consensus 25 ~GkPli~~~i~~l~~~~-~~~~ivv~t~~---~-~i~~~~~~~~-~~v-~~~~~~~~~g~~~~~~a~~~~~~d~~lv~~~ 97 (238)
T PRK13368 25 LGKPMIQHVYERAAQAA-GVEEVYVATDD---Q-RIEDAVEAFG-GKV-VMTSDDHLSGTDRLAEVMLKIEADIYINVQG 97 (238)
T ss_pred CCcCHHHHHHHHHHhcC-CCCeEEEECCh---H-HHHHHHHHcC-CeE-EecCccCCCccHHHHHHHHhCCCCEEEEEcC
Confidence 444 4777788887642 36788886542 2 3566776553 223 3333444456667655544 35689999999
Q ss_pred CC-CCchhHHHHHHhhc
Q 046508 264 DM-IPGRKMLQILSHVA 279 (932)
Q Consensus 264 D~-IP~~~~Le~Ll~~~ 279 (932)
|+ +-.+..++++++..
T Consensus 98 D~P~i~~~~i~~l~~~~ 114 (238)
T PRK13368 98 DEPMIRPRDIDTLIQPM 114 (238)
T ss_pred CcCcCCHHHHHHHHHHH
Confidence 97 67789999987653
No 192
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=26.68 E-value=6.9e+02 Score=27.52 Aligned_cols=39 Identities=26% Similarity=0.423 Sum_probs=32.1
Q ss_pred ceEEEecchhhhhhhhhhHHHHhccCCceEEEEEecCCC
Q 046508 442 DALFYAHSVDEVRALAPLLEKFRSTVGKKAYIVVSGGNF 480 (932)
Q Consensus 442 ~vLFaA~sL~~v~~LlPlaC~m~~~~~~~vh~almG~~~ 480 (932)
.|+|.+.+=-+.--+.|++-++.+.++-.+.+++.|.+.
T Consensus 1 ~i~~~~gtr~~~~~~~pl~~~l~~~~~~~~~~~~tg~h~ 39 (363)
T cd03786 1 KILVVTGTRPEYIKLAPLIRALKKDPGFELVLVVTGQHY 39 (363)
T ss_pred CEEEEEecCHHHHHHHHHHHHHhcCCCCCEEEEEeCCCC
Confidence 367888888888899999999999888888888886543
No 193
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=26.58 E-value=5.9e+02 Score=30.22 Aligned_cols=118 Identities=14% Similarity=0.164 Sum_probs=70.0
Q ss_pred cceEEEecchhhhhhhhhhHHHHhccCCceEEEEEecCCCCCHH---HHHHhcCCCcCCCccccccccccccccccCCCC
Q 046508 441 IDALFYAHSVDEVRALAPLLEKFRSTVGKKAYIVVSGGNFCPCE---DAASALNWPKLVCKERRFKIFDLTIGALSGVSN 517 (932)
Q Consensus 441 ~~vLFaA~sL~~v~~LlPlaC~m~~~~~~~vh~almG~~~i~~e---~~~~vnG~~~~~C~d~Rp~~fd~~~~~~s~~~r 517 (932)
..|++.-.+==++--|.||.-.....+.-..++++. +.+-+-| -..+..|+.+ | .||++++.-+++
T Consensus 4 ~Kv~~I~GTRPE~iKmapli~~~~~~~~~~~~vi~T-GQH~d~em~~~~le~~~i~~---p-----dy~L~i~~~~~t-- 72 (383)
T COG0381 4 LKVLTIFGTRPEAIKMAPLVKALEKDPDFELIVIHT-GQHRDYEMLDQVLELFGIRK---P-----DYDLNIMKPGQT-- 72 (383)
T ss_pred eEEEEEEecCHHHHHHhHHHHHHHhCCCCceEEEEe-cccccHHHHHHHHHHhCCCC---C-----CcchhccccCCC--
Confidence 457777777778888999988888887666666666 4555433 3445556653 3 356655532221
Q ss_pred CchhHHHHHHHhhhhchhhcCCcEEEEecccCHHHHHHHHHhhhhccCCceEEEc
Q 046508 518 SEVPVVQAVFSSMKGLIKIHNPSVVITVADIDSNVKKALKMATETKSNGTTLVLL 572 (932)
Q Consensus 518 ~~~~~~~~v~~~~~~~~~~~~P~viIt~~~~~~~~~~a~~~a~~~~~~~~~~I~L 572 (932)
...+...++.++.-+..=..|.+|++++|....|.-|+-. .-.+.-+.|||=
T Consensus 73 -l~~~t~~~i~~~~~vl~~~kPD~VlVhGDT~t~lA~alaa--~~~~IpV~HvEA 124 (383)
T COG0381 73 -LGEITGNIIEGLSKVLEEEKPDLVLVHGDTNTTLAGALAA--FYLKIPVGHVEA 124 (383)
T ss_pred -HHHHHHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHH--HHhCCceEEEec
Confidence 1122223333333344445799999998887666555543 322445556663
No 194
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=26.43 E-value=2.1e+02 Score=30.43 Aligned_cols=95 Identities=24% Similarity=0.295 Sum_probs=59.9
Q ss_pred EEEcCCchh---HHHHHHHHHcCCC-CCceEEEEeCCCCChhhHHHHHhhc-C--CCceEEEecCCC-cc----------
Q 046508 181 ILNHFKRKT---LCAQLDSLLQQTL-PFQHVWVLSFGSPNELSLKRIVNSY-N--DSRISFISSSYD-FK---------- 242 (932)
Q Consensus 181 VVvTYNR~~---L~e~L~aLl~QT~-~~~~IiVvdnaStD~t~t~~~l~~~-~--~~~i~~i~~~~N-~G---------- 242 (932)
|+.+.|..+ +.-+|.+|+.-+. .+.+|+|+.++-++.. .+.|++. . ...|+++..+.. ..
T Consensus 3 I~~~~d~~y~~~~~~~l~Sl~~~~~~~~~~~~il~~~is~~~--~~~L~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~ 80 (248)
T cd04194 3 IVFAIDDNYAPYLAVTIKSILANNSKRDYDFYILNDDISEEN--KKKLKELLKKYNSSIEFIKIDNDDFKFFPATTDHIS 80 (248)
T ss_pred EEEEecHhhHHHHHHHHHHHHhcCCCCceEEEEEeCCCCHHH--HHHHHHHHHhcCCeEEEEEcCHHHHhcCCccccccc
Confidence 555668864 7777889987544 3667999998866653 6677664 1 345666654321 11
Q ss_pred --cccchhhhhhc-CCcEEEEEcCCCCCchhHHHHHHhh
Q 046508 243 --YYGRFQMALQT-EADLVYIVDDDMIPGRKMLQILSHV 278 (932)
Q Consensus 243 --gaGgF~~a~~~-~~dyVwimDDD~IP~~~~Le~Ll~~ 278 (932)
.+.||..+... +.+-|..+|-|++...+ |.+|.+.
T Consensus 81 ~~~y~rl~l~~ll~~~~rvlylD~D~lv~~d-i~~L~~~ 118 (248)
T cd04194 81 YATYYRLLIPDLLPDYDKVLYLDADIIVLGD-LSELFDI 118 (248)
T ss_pred HHHHHHHHHHHHhcccCEEEEEeCCEEecCC-HHHHhcC
Confidence 12233333223 58999999999988874 5566543
No 195
>cd06426 NTP_transferase_like_2 NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=25.92 E-value=2.9e+02 Score=28.36 Aligned_cols=94 Identities=12% Similarity=0.186 Sum_probs=53.9
Q ss_pred EEEEcCCchhHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcC--CCceEEEecCCCcccccchhhhhhcCCcE
Q 046508 180 VILNHFKRKTLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYN--DSRISFISSSYDFKYYGRFQMALQTEADL 257 (932)
Q Consensus 180 aVVvTYNR~~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~--~~~i~~i~~~~N~GgaGgF~~a~~~~~dy 257 (932)
+.++--+|+.+.-+|+.|... ...+|+|+-+--.+ ...+++.+.. ..++.++..+...|-+|....+.+...+.
T Consensus 22 ~ll~~~g~pli~~~l~~l~~~--~~~~iivv~~~~~~--~i~~~~~~~~~~~~~i~~~~~~~~~g~~~~l~~~~~~~~~~ 97 (220)
T cd06426 22 PMLKVGGKPILETIIDRFIAQ--GFRNFYISVNYLAE--MIEDYFGDGSKFGVNISYVREDKPLGTAGALSLLPEKPTDP 97 (220)
T ss_pred ccCeECCcchHHHHHHHHHHC--CCcEEEEECccCHH--HHHHHHCCccccCccEEEEECCCCCcchHHHHHHHhhCCCC
Confidence 344445676688888888765 45678877654222 2344444321 13466766555555444433333344677
Q ss_pred EEEEcCCCCCchhHHHHHHhh
Q 046508 258 VYIVDDDMIPGRKMLQILSHV 278 (932)
Q Consensus 258 VwimDDD~IP~~~~Le~Ll~~ 278 (932)
+.|+.=|++... .++.+++.
T Consensus 98 ~lv~~~D~i~~~-~~~~l~~~ 117 (220)
T cd06426 98 FLVMNGDILTNL-NYEHLLDF 117 (220)
T ss_pred EEEEcCCEeecc-CHHHHHHH
Confidence 788888887765 45666653
No 196
>KOG1154 consensus Gamma-glutamyl kinase [Amino acid transport and metabolism]
Probab=24.40 E-value=74 Score=35.36 Aligned_cols=38 Identities=32% Similarity=0.394 Sum_probs=24.1
Q ss_pred cccccccchhhHHhhHHHHHHHHhhhhccCCcccHHHHHccc
Q 046508 124 FLQKKSNDAQMIKVKTELYKEILDFQSKSIGTETLNELMAMK 165 (932)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (932)
|.|-.-+-++|.=-|- ++..+|++.-.+.|+.||++|+
T Consensus 108 F~Qy~~~iAQvLvT~~----Di~d~~~r~Nl~~Ti~eLL~m~ 145 (285)
T KOG1154|consen 108 FTQYGITIAQVLVTRN----DILDEQQRKNLQNTISELLSMN 145 (285)
T ss_pred HHHhccchheeeecCc----chhhHHHHHHHHHHHHHHHhCC
Confidence 4444444444443333 4556677777888999999998
No 197
>COG2120 Uncharacterized proteins, LmbE homologs [Function unknown]
Probab=23.87 E-value=9.6e+02 Score=26.06 Aligned_cols=89 Identities=21% Similarity=0.213 Sum_probs=52.6
Q ss_pred ceEEE-ecchhhhhhhhhhHHHHhccCCceEEEEEe-----cCCCCC----------HHHHHHhcCCCcCCCcccccccc
Q 046508 442 DALFY-AHSVDEVRALAPLLEKFRSTVGKKAYIVVS-----GGNFCP----------CEDAASALNWPKLVCKERRFKIF 505 (932)
Q Consensus 442 ~vLFa-A~sL~~v~~LlPlaC~m~~~~~~~vh~alm-----G~~~i~----------~e~~~~vnG~~~~~C~d~Rp~~f 505 (932)
.+|+. ||.=++.--..+.+-+.+.+ |..|+++.+ |+..-. .+++++++|+++- -++
T Consensus 12 ~vL~v~aHPDDe~~g~ggtla~~~~~-G~~V~v~~lT~Ge~g~~~~~~~l~~~R~~E~~~a~~~LGv~~~-------~~l 83 (237)
T COG2120 12 RVLVVFAHPDDEEIGCGGTLAKLAAR-GVEVTVVCLTLGEAGENGGELELGAVRRAEARAAARVLGVRET-------IFL 83 (237)
T ss_pred cEEEEecCCcchhhccHHHHHHHHHC-CCeEEEEEccCCcccccCCccchHHHHHHHHHHHHHhcCCCcc-------eec
Confidence 45444 55545556666777777665 999999988 333333 4677888898651 123
Q ss_pred ccccccccCCCCCchhHHHHHHHhhhhchhhcCCcEEEEe
Q 046508 506 DLTIGALSGVSNSEVPVVQAVFSSMKGLIKIHNPSVVITV 545 (932)
Q Consensus 506 d~~~~~~s~~~r~~~~~~~~v~~~~~~~~~~~~P~viIt~ 545 (932)
|+ . +. ...--..++..+++-+..-..|++|+|.
T Consensus 84 ~~--~----~~-~~~~~~~~~~~~L~~ii~~~~P~~V~t~ 116 (237)
T COG2120 84 GF--P----DT-GADADPEEITGALVAIIRRLRPDVVFTP 116 (237)
T ss_pred CC--C----cc-ccccChHHHHHHHHHHHHHhCCCEEEec
Confidence 33 2 00 0001123455666667777899977775
No 198
>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [].
Probab=23.84 E-value=1.4e+02 Score=34.62 Aligned_cols=95 Identities=16% Similarity=0.192 Sum_probs=60.1
Q ss_pred cEEEEEEcCCch-hHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhc----CC-CceEE-----Ee---cCCCcc
Q 046508 177 KVTVILNHFKRK-TLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSY----ND-SRISF-----IS---SSYDFK 242 (932)
Q Consensus 177 ~VtaVVvTYNR~-~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~----~~-~~i~~-----i~---~~~N~G 242 (932)
.+.|.+=.=|-- .|++||+|.|- ..++.||.=|.+||+| +|++.++ .+ ..+.| +. ...|.-
T Consensus 88 ~~~~~iRvKnE~~tl~~si~S~Lp---ai~~gVI~yNdc~D~t--~Eiil~fckkyP~fip~~Ypy~v~~~n~~~~~n~l 162 (347)
T PF06306_consen 88 NPWAFIRVKNEAMTLAESIESILP---AIDEGVIGYNDCTDGT--EEIILEFCKKYPSFIPIKYPYEVIIKNPKSEENSL 162 (347)
T ss_pred CcceEEEEcchhhhHHHHHHHHHH---HHhccEEEeecCCCCH--HHHHHHHHHhCcccccccCcchhhccCCchhhhhh
Confidence 366777655664 49999999983 2778999999999985 9998764 22 11111 01 111111
Q ss_pred c-ccchhhhhhcCCcEEEEEcCCCCCchhHHHHHH
Q 046508 243 Y-YGRFQMALQTEADLVYIVDDDMIPGRKMLQILS 276 (932)
Q Consensus 243 g-aGgF~~a~~~~~dyVwimDDD~IP~~~~Le~Ll 276 (932)
. +-+|....-..+.|+.=+|.|-|-.+..|-++.
T Consensus 163 ~~YYNy~ls~ipk~~w~iKID~DhIy~~~KL~ksf 197 (347)
T PF06306_consen 163 YNYYNYVLSFIPKNEWAIKIDADHIYDTKKLYKSF 197 (347)
T ss_pred hhhhhhhhcccccceEEEEeccceeecHHHHhhhh
Confidence 1 112222222357888888999999999987775
No 199
>PF02630 SCO1-SenC: SCO1/SenC; InterPro: IPR003782 This family is involved in biogenesis of respiratory and photosynthetic systems. In yeast the SCO1 protein is specifically required for a post-translational step in the accumulation of subunits 1 and 2 of cytochrome c oxidase (COXI and COX-II) []. It is a mitochondrion-associated cytochrome c oxidase assembly factor. The purple nonsulphur photosynthetic eubacterium Rhodobacter capsulatus is a versatile organism that can obtain cellular energy by several means, including the capture of light energy for photosynthesis as well as the use of light-independent respiration, in which molecular oxygen serves as a terminal electron acceptor. The SenC protein is required for optimal cytochrome c oxidase activity in aerobically grown R. capsulatus cells and is involved in the induction of structural polypeptides of the light-harvesting and reaction centre complexes [].; PDB: 2K6V_A 3ME8_A 3ME7_A 2GT6_A 2GQL_A 2GQK_A 2GGT_B 1WP0_C 2HRN_A 2GQM_A ....
Probab=23.66 E-value=1.9e+02 Score=29.71 Aligned_cols=51 Identities=24% Similarity=0.345 Sum_probs=36.9
Q ss_pred ceeEEEEecCC-----c---hhHHHHHHHHHhccCCCCCc-cEEEEeCCCCC--HHHHHHHHhcC
Q 046508 598 RISVNIVTQNR-----V---HSLTRLLKSLSNAYYLGDEV-PISFNMDSKVD--EATIKLVSTFD 651 (932)
Q Consensus 598 ~i~IvIfaynR-----p---~sL~RLL~SL~~AdY~gd~~-~LtI~lD~~~D--~~~~~~l~~f~ 651 (932)
++-++-|.|.+ | ..+.++++.|.+. +..+ -|+|.+|+..| +.+++|++.|.
T Consensus 53 k~~lv~F~yT~CpdvCp~~l~~l~~~~~~l~~~---~~~v~~v~ISvDP~~DTp~~L~~Y~~~~~ 114 (174)
T PF02630_consen 53 KWVLVFFGYTRCPDVCPTTLANLSQLQKQLGEE---GKDVQFVFISVDPERDTPEVLKKYAKKFG 114 (174)
T ss_dssp SEEEEEEE-TTSSSHHHHHHHHHHHHHHHHHHT---TTTEEEEEEESSTTTC-HHHHHHHHHCHT
T ss_pred CeEEEEEEEcCCCccCHHHHHHHHHHHHHhhhc---cCceEEEEEEeCCCCCCHHHHHHHHHhcC
Confidence 56778888976 2 5677777777766 3344 38999999888 46889999884
No 200
>cd03072 PDI_b'_ERp44 PDIb' family, ERp44 subfamily, second redox inactive TRX-like domain b'; ERp44 is an endoplasmic reticulum (ER)-resident protein, induced during stress, involved in thiol-mediated ER retention. It contains an N-terminal TRX domain with a CXFS motif followed by two redox inactive TRX-like domains, homologous to the b and b' domains of PDI. Through the formation of reversible mixed disulfides, ERp44 mediates the ER localization of Ero1alpha, a protein that oxidizes protein disulfide isomerases into their active form. ERp44 also prevents the secretion of unassembled cargo protein with unpaired cysteines. ERp44 also modulates the activity of inositol 1,4,5-triphosphate type I receptor (IP3R1), an intracellular channel protein that mediates calcium release from the ER to the cytosol. Similar to PDI, the b' domain of ERp44 is likely involved in substrate recognition and may be the primary binding site.
Probab=23.07 E-value=1.2e+02 Score=29.02 Aligned_cols=58 Identities=10% Similarity=0.023 Sum_probs=41.5
Q ss_pred cccccceEEEecchhhhhhhhhhHHHHhcc---CCceEEEEEecCCCCCHHHHHHhcCCCcCCCc
Q 046508 437 YPQKIDALFYAHSVDEVRALAPLLEKFRST---VGKKAYIVVSGGNFCPCEDAASALNWPKLVCK 498 (932)
Q Consensus 437 ~~q~~~vLFaA~sL~~v~~LlPlaC~m~~~---~~~~vh~almG~~~i~~e~~~~vnG~~~~~C~ 498 (932)
.+.+..+||+ +.++.+.+.+...+.|.. -+.+++|+..-.+.-. .+.+.+|++++++|
T Consensus 15 ~~~~~~~l~f--~~~~~~~~~~~~~~vAk~~~~~kgki~Fv~~d~~~~~--~~~~~fgl~~~~~P 75 (111)
T cd03072 15 EGLPFLILFH--DKDDLESLKEFKQAVARQLISEKGAINFLTADGDKFR--HPLLHLGKTPADLP 75 (111)
T ss_pred CCCCeEEEEe--cchHHHHHHHHHHHHHHHHHhcCceEEEEEEechHhh--hHHHHcCCCHhHCC
Confidence 3456678888 777767766667777777 6677999988332221 28899999988787
No 201
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=23.04 E-value=6.5e+02 Score=30.51 Aligned_cols=113 Identities=12% Similarity=0.071 Sum_probs=69.7
Q ss_pred cccCcCCCceeEEEEecCC-chhHHHHHHHHHhccCC-CCCccEEEEeCCC-CC----HHHHHHHHhcC--CCCCCcEEE
Q 046508 590 ALPNWNRMRISVNIVTQNR-VHSLTRLLKSLSNAYYL-GDEVPISFNMDSK-VD----EATIKLVSTFD--WPHGPKTLR 660 (932)
Q Consensus 590 sL~aWnk~~i~IvIfaynR-p~sL~RLL~SL~~AdY~-gd~~~LtI~lD~~-~D----~~~~~~l~~f~--WP~g~vtlr 660 (932)
+...+++.+|.|+|=..+| .+.+.|.|+-.++.... .+.+.|+|-+... .| .++.+.++.++ .|...+++.
T Consensus 240 ~~~~~~~~~V~iIvPl~~r~~~~~~~Fl~~~~~~~l~~~~~~~L~vV~~~~~~~~~~~~~ik~~l~~l~~k~~~~~i~~i 319 (499)
T PF05679_consen 240 MPYVTESTRVHIIVPLSGREADWFRRFLENFEKVCLETDDNVFLTVVLFYDPSDSDSISQIKELLEELERKYPFSRIKWI 319 (499)
T ss_pred cccccCCCEEEEEEEecCccHHHHHHHHHHHHHHhcccCCceEEEEEEecCcccchhHHHHHHHHHHHHHhCCccceEEE
Confidence 3445667888887778899 99999999999988543 4556777766543 23 23444554432 255566555
Q ss_pred Eec-cccchhhhhhhhccc-CCCCceEEEEcCCcccChHHHHHHH
Q 046508 661 RRI-IQGGLIRAVSESWYP-ASDDDFGLLLEDDIEVSPYFYLWIK 703 (932)
Q Consensus 661 ~Ri-~n~GLir~VlEsf~P-~~~~s~vIVLEDDlevSP~Fy~Ylk 703 (932)
..- .+---.++ ++.... ..+++=+++.+-|+++++.|+.=+.
T Consensus 320 ~~~~~~fsr~~~-Ld~g~~~~~~d~L~f~~Dvd~~f~~~fL~rcR 363 (499)
T PF05679_consen 320 SVKTGEFSRGAA-LDVGAKKFPPDSLLFFCDVDMVFTSDFLNRCR 363 (499)
T ss_pred EecCCCccHHHH-HHhhcccCCCCcEEEEEeCCcccCHHHHHHHH
Confidence 433 11100111 122111 2246778999999999999986554
No 202
>PF13848 Thioredoxin_6: Thioredoxin-like domain; PDB: 3EC3_B 3BOA_A 2B5E_A 1BJX_A 2K18_A 3UEM_A 3BJ5_A 2BJX_A 2R2J_A 2L4C_A ....
Probab=23.00 E-value=1.5e+02 Score=29.43 Aligned_cols=55 Identities=11% Similarity=0.015 Sum_probs=43.3
Q ss_pred ceEEEecchhhhhhhhhhHHHHhccCCceEEEEEecCCCCCHHHHHHhcCCCcCCCc
Q 046508 442 DALFYAHSVDEVRALAPLLEKFRSTVGKKAYIVVSGGNFCPCEDAASALNWPKLVCK 498 (932)
Q Consensus 442 ~vLFaA~sL~~v~~LlPlaC~m~~~~~~~vh~almG~~~i~~e~~~~vnG~~~~~C~ 498 (932)
-++|+..+-++...+.-..-+.|..-+++++|+.+..+ ..+.+....|+++.+||
T Consensus 99 ~~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~f~~~d~~--~~~~~~~~~~i~~~~~P 153 (184)
T PF13848_consen 99 LILFDNKDNESTEAFKKELQDIAKKFKGKINFVYVDAD--DFPRLLKYFGIDEDDLP 153 (184)
T ss_dssp EEEEETTTHHHHHHHHHHHHHHHHCTTTTSEEEEEETT--TTHHHHHHTTTTTSSSS
T ss_pred EEEEEcCCchhHHHHHHHHHHHHHhcCCeEEEEEeehH--HhHHHHHHcCCCCccCC
Confidence 45555566667777777778888888889999999666 55778889999988898
No 203
>cd04906 ACT_ThrD-I_1 First of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase). This CD includes the first of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=21.97 E-value=1.6e+02 Score=26.74 Aligned_cols=22 Identities=9% Similarity=0.221 Sum_probs=17.9
Q ss_pred EEEEecCCchhHHHHHHHHHhc
Q 046508 601 VNIVTQNRVHSLTRLLKSLSNA 622 (932)
Q Consensus 601 IvIfaynRp~sL~RLL~SL~~A 622 (932)
+.|..+.|||+|.++++.|..|
T Consensus 4 l~v~ipD~PG~L~~ll~~l~~a 25 (85)
T cd04906 4 LAVTIPERPGSFKKFCELIGPR 25 (85)
T ss_pred EEEecCCCCcHHHHHHHHhCCC
Confidence 3455679999999999999944
No 204
>cd04189 G1P_TT_long G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase. This family is the long form of Glucose-1-phosphate thymidylyltransferase. Glucose-1-phosphate thymidylyltransferase catalyses the formation of dTDP-glucose, from dTTP and glucose 1-phosphate. It is the first enzyme in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.There are two forms of Glucose-1-phosphate thymidylyltransferase in bacteria and archeae; short form and long form. The long form, which has an extra 50 amino acids c-terminal, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced.The long from enzymes also have a left-handed parallel helix domain at the c-terminus, whereas, th eshort form enzymes do not have this domain. The homotetrameric, feedback inhibited short form is found in
Probab=21.57 E-value=8.3e+02 Score=25.38 Aligned_cols=90 Identities=11% Similarity=0.142 Sum_probs=51.8
Q ss_pred EEEcCCchhHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhcC--CCceEEEecCCCcccccchhhhhhc--CCc
Q 046508 181 ILNHFKRKTLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSYN--DSRISFISSSYDFKYYGRFQMALQT--EAD 256 (932)
Q Consensus 181 VVvTYNR~~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~~--~~~i~~i~~~~N~GgaGgF~~a~~~--~~d 256 (932)
.++.-+|+.|.-.|++|.+. ...+|+|+-+... ....+.+.+.. +.++.++..+.-.|-++....+... +.+
T Consensus 25 l~~i~g~~li~~~l~~l~~~--~~~~i~vv~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~sl~~a~~~i~~~~ 100 (236)
T cd04189 25 LIPVAGKPIIQYAIEDLREA--GIEDIGIVVGPTG--EEIKEALGDGSRFGVRITYILQEEPLGLAHAVLAARDFLGDEP 100 (236)
T ss_pred eeEECCcchHHHHHHHHHHC--CCCEEEEEcCCCH--HHHHHHhcchhhcCCeEEEEECCCCCChHHHHHHHHHhcCCCC
Confidence 33333666688889888765 4678888876632 23456665431 2356677655555545545445442 467
Q ss_pred EEEEEcCCCCCchhHHHHHH
Q 046508 257 LVYIVDDDMIPGRKMLQILS 276 (932)
Q Consensus 257 yVwimDDD~IP~~~~Le~Ll 276 (932)
|+.+.-|..+ ..+ +..++
T Consensus 101 ~li~~~D~~~-~~~-~~~~~ 118 (236)
T cd04189 101 FVVYLGDNLI-QEG-ISPLV 118 (236)
T ss_pred EEEEECCeec-CcC-HHHHH
Confidence 7776655444 444 44454
No 205
>PF02585 PIG-L: GlcNAc-PI de-N-acetylase; InterPro: IPR003737 A number of the members of this family have been characterised as a probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase, (3.5.1.89 from EC) that catalyses the second step in glycosylphosphatidylinositol (GPI) biosynthesis [, ]. The family also includes a number of thiol biosynthesis proteins. ; PDB: 2XAD_C 2X9L_A 3DFK_A 3DFM_A 3DFF_A 2IXD_A 1UAN_A 1Q74_B 1Q7T_B 3DFI_A.
Probab=21.43 E-value=5.1e+02 Score=24.67 Aligned_cols=90 Identities=20% Similarity=0.204 Sum_probs=46.9
Q ss_pred EEEecchhhhhhhhhhHHHHhccCCceEEEEEecCCCCC------------------HHHHHHhcCCCcCCCcccccccc
Q 046508 444 LFYAHSVDEVRALAPLLEKFRSTVGKKAYIVVSGGNFCP------------------CEDAASALNWPKLVCKERRFKIF 505 (932)
Q Consensus 444 LFaA~sL~~v~~LlPlaC~m~~~~~~~vh~almG~~~i~------------------~e~~~~vnG~~~~~C~d~Rp~~f 505 (932)
+++||-=+++--..+++-++... |..|+++++..++-. ...+.+++|+. .|. ++
T Consensus 2 vi~aHpDDe~l~~gg~i~~~~~~-g~~v~vv~~t~G~~~~~~~~~~~~~~~~~R~~E~~~a~~~lGv~--~~~-----~l 73 (128)
T PF02585_consen 2 VIAAHPDDEELGCGGTIAKLAEA-GHRVVVVTLTDGEAGHPDPTPWARELGEIRRAEARAAAEILGVE--NVI-----FL 73 (128)
T ss_dssp EEESSTTHHHHHHHHHHHHHHHT-T-EEEEEECE--TTTSSSSHHHHHSCHHHHHHHHHHHHHHCT-E--EEE-----EE
T ss_pred EEEECCCchHHhhHHHHHHHHhc-CCeEEEEEecccccCCcccchhhHhHHHHHHHHHHHHHHHcCCc--eEE-----Ee
Confidence 34455555555777777777776 899999988433221 12344567772 221 22
Q ss_pred ccccccccCCCCCchhHHHHHHHhhhhchhhcCCcEEEEecc
Q 046508 506 DLTIGALSGVSNSEVPVVQAVFSSMKGLIKIHNPSVVITVAD 547 (932)
Q Consensus 506 d~~~~~~s~~~r~~~~~~~~v~~~~~~~~~~~~P~viIt~~~ 547 (932)
||.-+. ....-.+.+...+..+..-..|.+|+|...
T Consensus 74 ~~~D~~------~~~~~~~~~~~~l~~~i~~~~p~~V~t~~~ 109 (128)
T PF02585_consen 74 DFPDGQ------LPGWSWEELVRDLEDLIREFRPDVVFTPDP 109 (128)
T ss_dssp EECTTS------CTCHHHHHHHHHHHHHHHHH-ESEEEEE-S
T ss_pred ecCCCC------cccccHHHHHHHHHHHHHHcCCCEEEECCC
Confidence 221111 111123445555666667778999999743
No 206
>cd02982 PDI_b'_family Protein Disulfide Isomerase (PDIb') family, redox inactive TRX-like domain b'; composed of eukaryotic proteins involved in oxidative protein folding in the endoplasmic reticulum (ER) by acting as catalysts and folding assistants. Members of this family include PDI, calsequestrin and other PDI-related proteins like ERp72, ERp57 (or ERp60), ERp44, P5 and PDIR. PDI, ERp57, ERp72, P5 and PDIR are all oxidases, catalyzing the formation of disulfide bonds of newly synthesized polypeptides in the ER. They also exhibit reductase activity in acting as isomerases to correct any non-native disulfide bonds, as well as chaperone activity to prevent protein aggregation and facilitate the folding of newly synthesized proteins. These proteins contain multiple copies of a redox active TRX (a) domain containing a CXXC motif, and one or more redox inactive TRX-like (b) domains. The molecular structure of PDI is abb'a'. Also included in this family is the PDI-related protein ERp27, w
Probab=21.36 E-value=1.6e+02 Score=26.47 Aligned_cols=58 Identities=14% Similarity=0.108 Sum_probs=44.7
Q ss_pred cccceEEEecchhhhhhhhhhHHHHhccCCceEEEEEecCCCCCHHHHHHhcCCCcCCCc
Q 046508 439 QKIDALFYAHSVDEVRALAPLLEKFRSTVGKKAYIVVSGGNFCPCEDAASALNWPKLVCK 498 (932)
Q Consensus 439 q~~~vLFaA~sL~~v~~LlPlaC~m~~~~~~~vh~almG~~~i~~e~~~~vnG~~~~~C~ 498 (932)
.+.-++|++.+-+.-..+.|...+.|..-+.++.|+.+-.+. ..++++..|+..+..|
T Consensus 13 ~~~~~~f~~~~~~~~~~~~~~~~~vA~~~~~~v~f~~vd~~~--~~~~~~~~~i~~~~~P 70 (103)
T cd02982 13 KPLLVLFYNKDDSESEELRERFKEVAKKFKGKLLFVVVDADD--FGRHLEYFGLKEEDLP 70 (103)
T ss_pred CCEEEEEEcCChhhHHHHHHHHHHHHHHhCCeEEEEEEchHh--hHHHHHHcCCChhhCC
Confidence 345677887777678888898889998887889999985555 4568888999755565
No 207
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=21.09 E-value=5.7e+02 Score=25.55 Aligned_cols=91 Identities=16% Similarity=0.154 Sum_probs=49.8
Q ss_pred ceEEEecch-----hhhhhhhhhHHHHhccCCceEEEEEecCCCCCHHHH----HHhcCCCcCCCccccccccccccccc
Q 046508 442 DALFYAHSV-----DEVRALAPLLEKFRSTVGKKAYIVVSGGNFCPCEDA----ASALNWPKLVCKERRFKIFDLTIGAL 512 (932)
Q Consensus 442 ~vLFaA~sL-----~~v~~LlPlaC~m~~~~~~~vh~almG~~~i~~e~~----~~vnG~~~~~C~d~Rp~~fd~~~~~~ 512 (932)
+||++++.- +.-..++-.|-+++...+.+|+.+++| +.-..++. ....|.++. ....-| .+ ..
T Consensus 1 ~ilv~~e~~~~~l~~~~~e~l~~A~~La~~~g~~v~av~~G-~~~~~~~~l~~~l~~~G~d~v-~~~~~~---~~--~~- 72 (164)
T PF01012_consen 1 NILVFAEHRDGRLNPVSLEALEAARRLAEALGGEVTAVVLG-PAEEAAEALRKALAKYGADKV-YHIDDP---AL--AE- 72 (164)
T ss_dssp EEEEEE-EETCEE-HHHHHHHHHHHHHHHCTTSEEEEEEEE-TCCCHHHHHHHHHHSTTESEE-EEEE-G---GG--TT-
T ss_pred CEEEEEECCCCccCHHHHHHHHHHHHHHhhcCCeEEEEEEe-cchhhHHHHhhhhhhcCCcEE-EEecCc---cc--cc-
Confidence 355665544 234567778999999999999999999 42333333 444577653 221011 00 10
Q ss_pred cCCCCCchhHHHHHHHhhhhchhhcCCcEEEEeccc
Q 046508 513 SGVSNSEVPVVQAVFSSMKGLIKIHNPSVVITVADI 548 (932)
Q Consensus 513 s~~~r~~~~~~~~v~~~~~~~~~~~~P~viIt~~~~ 548 (932)
.. ..++..++..+..-+.|..|+.-.+.
T Consensus 73 -----~~---~~~~a~~l~~~~~~~~~~lVl~~~t~ 100 (164)
T PF01012_consen 73 -----YD---PEAYADALAELIKEEGPDLVLFGSTS 100 (164)
T ss_dssp -----C----HHHHHHHHHHHHHHHT-SEEEEESSH
T ss_pred -----cC---HHHHHHHHHHHHHhcCCCEEEEcCcC
Confidence 01 12233444444555789999987443
No 208
>PF05212 DUF707: Protein of unknown function (DUF707); InterPro: IPR007877 This family consists of uncharacterised proteins from Arabidopsis thaliana.
Probab=21.08 E-value=3.1e+02 Score=31.32 Aligned_cols=108 Identities=15% Similarity=0.179 Sum_probs=63.2
Q ss_pred EEEEEEcCCchhHHHHHHHHHc-CCCCCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCCcc--cccchhhh-hhc
Q 046508 178 VTVILNHFKRKTLCAQLDSLLQ-QTLPFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYDFK--YYGRFQMA-LQT 253 (932)
Q Consensus 178 VtaVVvTYNR~~L~e~L~aLl~-QT~~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N~G--gaGgF~~a-~~~ 253 (932)
.-|+=|-++-+.. ++++.. .+..+.=++..=||.+|+ +.-++ .. .+...|...+.++ +|=||..- +-+
T Consensus 44 Lla~~VG~kqk~~---vd~~v~Kf~~nF~i~LfhYDg~vd~---w~~~~-ws-~~aiHv~~~kqtKww~akrfLHPdiv~ 115 (294)
T PF05212_consen 44 LLAMTVGIKQKDN---VDAIVKKFSDNFDIMLFHYDGRVDE---WDDFE-WS-DRAIHVSARKQTKWWFAKRFLHPDIVA 115 (294)
T ss_pred EEEEEecHHHHhh---hhHHHhhhccCceEEEEEecCCcCc---hhhcc-cc-cceEEEEeccceEEeehhhhcChhhhc
Confidence 4555565666543 333332 244566677778899986 33221 12 2334555545555 77788763 557
Q ss_pred CCcEEEEEcCCCCCchhHHHH---HHhhccccccccccccccc
Q 046508 254 EADLVYIVDDDMIPGRKMLQI---LSHVAGTEKYKNSVLGSIG 293 (932)
Q Consensus 254 ~~dyVwimDDD~IP~~~~Le~---Ll~~~g~~~~~~~vlgs~G 293 (932)
.||||||-|||.-.+...+++ +++.-|.+-..+++=..+|
T Consensus 116 ~YdYiflwDeDL~vd~f~~~ry~~Ivk~~gLeISQPALd~~~~ 158 (294)
T PF05212_consen 116 PYDYIFLWDEDLGVDHFDINRYFEIVKKEGLEISQPALDPDSS 158 (294)
T ss_pred cceeEEecCCccCcCcCCHHHHHHHHHHhCCcccCcccCCCCc
Confidence 899999999997555444444 4555565656664443344
No 209
>PF04123 DUF373: Domain of unknown function (DUF373); InterPro: IPR007254 This archaeal family of unknown function is predicted to be an integral membrane protein with six transmembrane regions.
Probab=20.34 E-value=2.2e+02 Score=33.19 Aligned_cols=49 Identities=24% Similarity=0.245 Sum_probs=35.7
Q ss_pred cEEEEEEcCCch-------hHHHHHHHHHcCCCCCceEEEEeCCCCChhhHHHHHhhc
Q 046508 177 KVTVILNHFKRK-------TLCAQLDSLLQQTLPFQHVWVLSFGSPNELSLKRIVNSY 227 (932)
Q Consensus 177 ~VtaVVvTYNR~-------~L~e~L~aLl~QT~~~~~IiVvdnaStD~t~t~~~l~~~ 227 (932)
.|-++++|=++. .+.+|||.++++. +++.+++|-||..|+. .--++++.
T Consensus 66 dveVA~VsG~~~~~v~ad~~I~~qld~vl~~~-~~~~~i~VsDGaeDE~-vlPiIqSr 121 (344)
T PF04123_consen 66 DVEVAVVSGSPDVGVEADRKIAEQLDEVLSKF-DPDSAIVVSDGAEDER-VLPIIQSR 121 (344)
T ss_pred CeEEEEEECCCCCchhhHHHHHHHHHHHHHhC-CCCEEEEEecChhhhh-hhHhhhcc
Confidence 355555554442 2899999999765 6789999999999984 44566664
No 210
>PF01913 FTR: Formylmethanofuran-tetrahydromethanopterin formyltransferase; InterPro: IPR022667 Formylmethanofuran:tetrahyromethanopterin formyltransferase (Ftr) is involved in C1 metabolism in methanogenic archaea, sulphate-reducing archaea and methylotrophic bacteria. It catalyses the following reversible reaction: N-formylmethanofuran + 5,6,7,8-tetrahydromethanopterin = methanofuran + 5-formyl-5,6,7,8-tetrahydromethanopterin Ftr from the thermophilic methanogen Methanopyrus kandleri (optimum growth temperature 98 degrees C) is a hyperthermophilic enzyme that is absolutely dependent on the presence of lyotropic salts for activity and thermostability. The crystal structure of Ftr, determined to a reveals a homotetramer composed essentially of two dimers. Each subunit is subdivided into two tightly associated lobes both consisting of a predominantly antiparallel beta sheet flanked by alpha helices forming an alpha/beta sandwich structure. The approximate location of the active site was detected in a region close to the dimer interface []. Ftr from the mesophilic methanogen Methanosarcina barkeri and the sulphate-reducing archaeon Archaeoglobus fulgidus have a similar structure []. In the methylotrophic bacterium Methylobacterium extorquens, Ftr interacts with three other polypeptides to form an Ftr/cyclohydrolase complex which catalyses the hydrolysis of formyl-tetrahydromethanopterin to formate during growth on C1 substrates [].; GO: 0016740 transferase activity, 0006730 one-carbon metabolic process; PDB: 1M5H_E 1M5S_C 1FTR_C 2FHJ_B 2FHK_D.
Probab=20.28 E-value=67 Score=32.96 Aligned_cols=70 Identities=20% Similarity=0.351 Sum_probs=46.5
Q ss_pred CCCCcEEEEEEcCCchhHHHHHHHHHcCCC---CCceEEEEeCCCCChhhHHHHHhhcCCCceEEEecCCCccccc-chh
Q 046508 173 PNRPKVTVILNHFKRKTLCAQLDSLLQQTL---PFQHVWVLSFGSPNELSLKRIVNSYNDSRISFISSSYDFKYYG-RFQ 248 (932)
Q Consensus 173 ~~~~~VtaVVvTYNR~~L~e~L~aLl~QT~---~~~~IiVvdnaStD~t~t~~~l~~~~~~~i~~i~~~~N~GgaG-gF~ 248 (932)
++.|.|++.+.+++++.|.+||..=+.|.+ |-.. +=||.+|. -..+.++.++++.| ||+
T Consensus 67 DGRPGv~il~f~~~~~~L~~~l~~RigQcVLT~PttA---~f~gl~~~--------------~~~i~~g~~lr~FGDG~q 129 (144)
T PF01913_consen 67 DGRPGVSILIFAMSKKKLEKQLLERIGQCVLTCPTTA---CFNGLPDA--------------EKRIDLGKKLRFFGDGYQ 129 (144)
T ss_dssp TSS-EEEEEEEESSHHHHHHHHHHHHHHHTTTSTT-E---EEESSTT---------------SEEE-HHHHHHGGGTT--
T ss_pred CCCCcEEEEEEeCCHHHHHHHHHHHccCcccCChhHH---HhcCCCCc--------------CceeecCccccCccCCce
Confidence 378899999999999999999888888954 3332 33555443 24678888888666 888
Q ss_pred hhhhcCCcEEE
Q 046508 249 MALQTEADLVY 259 (932)
Q Consensus 249 ~a~~~~~dyVw 259 (932)
...+..+.=+|
T Consensus 130 ~sk~~~grr~w 140 (144)
T PF01913_consen 130 ISKEIGGRRYW 140 (144)
T ss_dssp EEEEETTEEEE
T ss_pred EEEEECCEEEE
Confidence 77666655555
No 211
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=20.00 E-value=5.5e+02 Score=28.99 Aligned_cols=114 Identities=16% Similarity=0.148 Sum_probs=69.2
Q ss_pred cccCCcccccCcCCCceeEEEEecCCchhHHHHHHHHHhccCCCCCccEEEEeCCCC--CH---HHHHHHHhcC------
Q 046508 583 MADLRSAALPNWNRMRISVNIVTQNRVHSLTRLLKSLSNAYYLGDEVPISFNMDSKV--DE---ATIKLVSTFD------ 651 (932)
Q Consensus 583 ia~Ld~~sL~aWnk~~i~IvIfaynRp~sL~RLL~SL~~AdY~gd~~~LtI~lD~~~--D~---~~~~~l~~f~------ 651 (932)
|.++.+++-++=|+.+|-|+.-.-|....+.+-+.-|.+-+|+-..+.|-+-++... |. .+.+.+...+
T Consensus 11 ln~~~~~~~~~~~~e~VLILtplrna~~~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~~~~~q~~~~~~ 90 (269)
T PF03452_consen 11 LNKLTSTSDAARNKESVLILTPLRNAASFLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAALKKLQSHGPES 90 (269)
T ss_pred CCcccCCCcccccCCeEEEEEecCCchHHHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHHHHHHhccCccc
Confidence 345556666667788777655555777889999999999999988788877666554 32 2333333332
Q ss_pred CCCCCcEEEEe---------------ccccchh-------hh-hhhhcccCC-CCceEEEEcCCcccChHH
Q 046508 652 WPHGPKTLRRR---------------IIQGGLI-------RA-VSESWYPAS-DDDFGLLLEDDIEVSPYF 698 (932)
Q Consensus 652 WP~g~vtlr~R---------------i~n~GLi-------r~-VlEsf~P~~-~~s~vIVLEDDlevSP~F 698 (932)
=+|+.++|-+. ....+.. |. ++-+ -.. .+++|+-|+-|++-+|-=
T Consensus 91 ~~F~~itIl~~df~~~~~~~~~~RH~~~~Q~~RR~~mAraRN~LL~~--aL~p~~swVlWlDaDIv~~P~~ 159 (269)
T PF03452_consen 91 KRFRSITILRKDFGQQLSQDRSERHAFEVQRPRRRAMARARNFLLSS--ALGPWHSWVLWLDADIVETPPT 159 (269)
T ss_pred CCcceEEEEcCCCcccccCchhhccchhhHHHHHHHHHHHHHHHHHh--hcCCcccEEEEEecCcccCChH
Confidence 24566665433 1111221 11 1111 122 468999999999877753
Done!