AmiGO: BLAST Results


BLAST match view associations BLAST with SPT42 SPT42 SPT42 SPT4 homolog 2	protein from Arabidopsis thaliana	7.8e-55
BLAST match view associations BLAST with AT5G08565 AT5G08565 AT5G08565	protein from Arabidopsis thaliana	5.5e-54
BLAST match view associations BLAST with SUPT4H1 SUPT4H1 SUPT4H1 Transcription elongation factor SPT4	protein from Bos taurus	4.4e-20
BLAST match view associations BLAST with SUPT4H1 SUPT4H1 SUPT4H1 Uncharacterized protein	protein from Canis lupus familiaris	4.4e-20
BLAST match view associations BLAST with SUPT4H1 SUPT4H1 SUPT4H1 Transcription elongation factor SPT4	protein from Homo sapiens	4.4e-20
BLAST match view associations BLAST with LOC100515097 LOC100515097 LOC100515097 Uncharacterized protein	protein from Sus scrofa	4.4e-20
BLAST match view associations BLAST with SUPT4H1 SUPT4H1 SUPT4H1 Transcription elongation factor SPT4	protein from Macaca fascicularis	4.4e-20
BLAST match view associations BLAST with Supt4a Supt4a Supt4a suppressor of Ty 4A	protein from Mus musculus	4.4e-20
BLAST match view associations BLAST with Supt4h1 Supt4h1 Supt4h1 suppressor of Ty 4 homolog 1 (S. cerevisiae)	gene from Rattus norvegicus	4.4e-20
BLAST match view associations BLAST with SUPT4H1 SUPT4H1 SUPT4H1 Transcription elongation factor SPT4	protein from Pongo abelii	5.7e-20
BLAST match view associations BLAST with supt4h1 supt4h1 supt4h1 suppressor of Ty 4 homolog 1 (S. cerevisiae)	gene_product from Danio rerio	7.2e-20
BLAST match view associations BLAST with SUPT4H1 SUPT4H1 SUPT4H1 Uncharacterized protein	protein from Gallus gallus	9.2e-20
BLAST match view associations BLAST with supt4h1 supt4h1 supt4h1 Transcription elongation factor SPT4	protein from Xenopus laevis	9.2e-20
BLAST match view associations BLAST with Supt4b Supt4b Supt4b suppressor of Ty 4B	protein from Mus musculus	2.5e-19
BLAST match view associations BLAST with spt4 spt4 spt4	protein from Drosophila melanogaster	3.1e-19
BLAST match view associations BLAST with PF10_0293 PF10_0293 PF10_0293 transcription factor, putative	gene from Plasmodium falciparum	1.1e-18
BLAST match view associations BLAST with PF10_0293 PF10_0293 PF10_0293 Transcription factor, putative	protein from Plasmodium falciparum 3D7	1.1e-18
BLAST match view associations BLAST with spt-4 spt-4 spt-4	gene from Caenorhabditis elegans	2.2e-18
BLAST match view associations BLAST with LOC100515097 LOC100515097 LOC100515097 Uncharacterized protein	protein from Sus scrofa	2.0e-15
BLAST match view associations BLAST with SUPT4H1 SUPT4H1 SUPT4H1 Transcription elongation factor SPT4	protein from Homo sapiens	8.8e-15
BLAST match view associations BLAST with SPT4 SPT4 SPT4 Component of the universally conserved Spt4/5 complex (DSIF complex)	gene from Saccharomyces cerevisiae	3.8e-14
BLAST match view associations BLAST with orf19.3947 orf19.3947 orf19.3947	gene_product from Candida albicans	4.9e-14
BLAST match view associations BLAST with spt4 spt4 spt4 transcription initiation factor Spt4	gene from Dictyostelium discoideum	1.6e-13
BLAST match view associations BLAST with SUPT4H1 SUPT4H1 SUPT4H1 Transcription elongation factor SPT4	protein from Homo sapiens	6.6e-10
BLAST match view associations BLAST with SUPT4H1 SUPT4H1 SUPT4H1 Transcription elongation factor SPT4	protein from Homo sapiens	1.1e-09

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046522
        (115 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2160579 - symbol:SPT42 "SPT4 homolog 2" specie...   566  7.8e-55   1
TAIR|locus:505006588 - symbol:AT5G08565 species:3702 "Ara...   558  5.5e-54   1
UNIPROTKB|Q3SYX6 - symbol:SUPT4H1 "Transcription elongati...   238  4.4e-20   1
UNIPROTKB|E2RAN9 - symbol:SUPT4H1 "Uncharacterized protei...   238  4.4e-20   1
UNIPROTKB|P63272 - symbol:SUPT4H1 "Transcription elongati...   238  4.4e-20   1
UNIPROTKB|K7GKT6 - symbol:LOC100515097 "Uncharacterized p...   238  4.4e-20   1
UNIPROTKB|Q4R941 - symbol:SUPT4H1 "Transcription elongati...   238  4.4e-20   1
MGI|MGI:107416 - symbol:Supt4a "suppressor of Ty 4A" spec...   238  4.4e-20   1
RGD|1306372 - symbol:Supt4h1 "suppressor of Ty 4 homolog ...   238  4.4e-20   1
UNIPROTKB|Q5RFH5 - symbol:SUPT4H1 "Transcription elongati...   237  5.7e-20   1
ZFIN|ZDB-GENE-040718-214 - symbol:supt4h1 "suppressor of ...   236  7.2e-20   1
UNIPROTKB|E1C4X4 - symbol:SUPT4H1 "Uncharacterized protei...   235  9.2e-20   1
UNIPROTKB|Q5HZ97 - symbol:supt4h1 "Transcription elongati...   235  9.2e-20   1
MGI|MGI:1335090 - symbol:Supt4b "suppressor of Ty 4B" spe...   231  2.5e-19   1
FB|FBgn0028683 - symbol:spt4 "spt4" species:7227 "Drosoph...   230  3.1e-19   1
GENEDB_PFALCIPARUM|PF10_0293 - symbol:PF10_0293 "transcri...   225  1.1e-18   1
UNIPROTKB|Q8IJA5 - symbol:PF10_0293 "Transcription factor...   225  1.1e-18   1
WB|WBGene00005014 - symbol:spt-4 species:6239 "Caenorhabd...   222  2.2e-18   1
ASPGD|ASPL0000049906 - symbol:AN10280 species:162425 "Eme...   211  3.2e-17   1
UNIPROTKB|F2Z535 - symbol:LOC100515097 "Uncharacterized p...   194  2.0e-15   1
UNIPROTKB|J3QSB9 - symbol:SUPT4H1 "Transcription elongati...   188  8.8e-15   1
SGD|S000003295 - symbol:SPT4 "Component of the universall...   182  3.8e-14   1
CGD|CAL0002982 - symbol:orf19.3947 species:5476 "Candida ...   181  4.9e-14   1
DICTYBASE|DDB_G0285293 - symbol:spt4 "transcription initi...   176  1.6e-13   1
POMBASE|SPBC21C3.16c - symbol:spt4 "transcription elongat...   160  8.2e-12   1
UNIPROTKB|D3DTZ5 - symbol:SUPT4H1 "Suppressor of Ty 4 hom...   142  6.6e-10   1
UNIPROTKB|J3QR04 - symbol:SUPT4H1 "Transcription elongati...   140  1.1e-09   1


>TAIR|locus:2160579 [details] [associations]
            symbol:SPT42 "SPT4 homolog 2" species:3702 "Arabidopsis
            thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0032786 "positive
            regulation of DNA-dependent transcription, elongation"
            evidence=IEA] [GO:0000394 "RNA splicing, via endonucleolytic
            cleavage and ligation" evidence=RCA] [GO:0006366 "transcription
            from RNA polymerase II promoter" evidence=RCA] InterPro:IPR009287
            PIRSF:PIRSF025023 GO:GO:0005634 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
            EMBL:AB005234 GO:GO:0032786 KO:K15171 eggNOG:COG5204
            HOGENOM:HOG000172685 ProtClustDB:CLSN2689546 InterPro:IPR016046
            InterPro:IPR022800 PANTHER:PTHR12882 Pfam:PF06093 EMBL:AY035161
            EMBL:AY063032 EMBL:AY084523 IPI:IPI00546821 RefSeq:NP_568976.1
            UniGene:At.19652 ProteinModelPortal:Q94C60 SMR:Q94C60 STRING:Q94C60
            PaxDb:Q94C60 PRIDE:Q94C60 EnsemblPlants:AT5G63670.1 GeneID:836487
            KEGG:ath:AT5G63670 TAIR:At5g63670 InParanoid:Q94C60 OMA:YEADETY
            PhylomeDB:Q94C60 Genevestigator:Q94C60 GermOnline:AT5G63670
            Uniprot:Q94C60
        Length = 116

 Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
 Identities = 99/115 (86%), Positives = 111/115 (96%)

Query:     1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN 60
             MGSAPAQIPTSFGHELRACLRCRLVKTYDQFR++GCENCPFFKM+EDHER+V+ TTPNFN
Sbjct:     1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRDAGCENCPFFKMEEDHERIVEVTTPNFN 60

Query:    61 GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
             GIISVMDP+RSWAARWLRIG+F PGCYTLAVSE LPE++Q+LC++ERVQYV PKR
Sbjct:    61 GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPLPEEMQHLCQEERVQYVLPKR 115


>TAIR|locus:505006588 [details] [associations]
            symbol:AT5G08565 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0032786 "positive regulation of
            DNA-dependent transcription, elongation" evidence=IEA] [GO:0000394
            "RNA splicing, via endonucleolytic cleavage and ligation"
            evidence=RCA] [GO:0006366 "transcription from RNA polymerase II
            promoter" evidence=RCA] InterPro:IPR009287 PIRSF:PIRSF025023
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
            GO:GO:0008270 GO:GO:0006351 GO:GO:0032786 EMBL:AB006697 KO:K15171
            EMBL:BT024785 EMBL:AK228575 EMBL:AY086462 IPI:IPI00526116
            RefSeq:NP_568201.1 UniGene:At.32557 ProteinModelPortal:Q8LCQ3
            SMR:Q8LCQ3 STRING:Q8LCQ3 PRIDE:Q8LCQ3 EnsemblPlants:AT5G08565.1
            GeneID:830757 KEGG:ath:AT5G08565 TAIR:At5g08565 eggNOG:COG5204
            HOGENOM:HOG000172685 InParanoid:Q8LCQ3 OMA:SWVAKWQ PhylomeDB:Q8LCQ3
            ProtClustDB:CLSN2689546 Genevestigator:Q8LCQ3 GermOnline:AT5G08565
            InterPro:IPR016046 InterPro:IPR022800 PANTHER:PTHR12882
            Pfam:PF06093 Uniprot:Q8LCQ3
        Length = 116

 Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
 Identities = 97/115 (84%), Positives = 108/115 (93%)

Query:     1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN 60
             MG APAQIPTSFGHELRACLRCRLVKTYDQFR+SGCENCPFFK+++DHER+VD TTPNFN
Sbjct:     1 MGEAPAQIPTSFGHELRACLRCRLVKTYDQFRDSGCENCPFFKIEDDHERIVDVTTPNFN 60

Query:    61 GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
             GIIS+MDP RSWAARWLRIG+F PGCYTLAVSEALPE++Q +C+  RVQYVPPKR
Sbjct:    61 GIISMMDPRRSWAARWLRIGKFAPGCYTLAVSEALPEEMQFICQQARVQYVPPKR 115


>UNIPROTKB|Q3SYX6 [details] [associations]
            symbol:SUPT4H1 "Transcription elongation factor SPT4"
            species:9913 "Bos taurus" [GO:0032044 "DSIF complex" evidence=ISS]
            [GO:0046982 "protein heterodimerization activity" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0034244 "negative
            regulation of transcription elongation from RNA polymerase II
            promoter" evidence=IEA] [GO:0032786 "positive regulation of
            DNA-dependent transcription, elongation" evidence=IEA] [GO:0006368
            "transcription elongation from RNA polymerase II promoter"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] InterPro:IPR009287 PIRSF:PIRSF025023
            GO:GO:0046872 GO:GO:0008270 GO:GO:0045944 GO:GO:0000122
            GO:GO:0006368 GO:GO:0034244 GO:GO:0032786 KO:K15171 eggNOG:COG5204
            HOGENOM:HOG000172685 OMA:SWVAKWQ InterPro:IPR016046
            InterPro:IPR022800 PANTHER:PTHR12882 Pfam:PF06093
            GeneTree:ENSGT00390000018559 HOVERGEN:HBG055988 OrthoDB:EOG4P2Q3R
            GO:GO:0032044 EMBL:BT025461 EMBL:BC103340 IPI:IPI00692284
            RefSeq:NP_001029964.1 UniGene:Bt.49115 ProteinModelPortal:Q3SYX6
            SMR:Q3SYX6 STRING:Q3SYX6 Ensembl:ENSBTAT00000004389 GeneID:616425
            KEGG:bta:616425 CTD:6827 InParanoid:Q3SYX6 NextBio:20900127
            Uniprot:Q3SYX6
        Length = 117

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 44/104 (42%), Positives = 63/104 (60%)

Query:     8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
             +P    H LRACL C LVKT DQF   GC+NC  + +M  + E V DCT+ +F+GII++M
Sbjct:     6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMM 64

Query:    67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
              P  SW ++W R+  F PG Y ++V+  LP+ +    +   V Y
Sbjct:    65 SPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108


>UNIPROTKB|E2RAN9 [details] [associations]
            symbol:SUPT4H1 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0046982 "protein heterodimerization
            activity" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0034244 "negative regulation of transcription elongation from
            RNA polymerase II promoter" evidence=IEA] [GO:0032786 "positive
            regulation of DNA-dependent transcription, elongation"
            evidence=IEA] [GO:0032044 "DSIF complex" evidence=IEA] [GO:0006368
            "transcription elongation from RNA polymerase II promoter"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] InterPro:IPR009287 PIRSF:PIRSF025023
            GO:GO:0008270 GO:GO:0045944 GO:GO:0000122 GO:GO:0006368
            GO:GO:0034244 GO:GO:0032786 KO:K15171 OMA:SWVAKWQ
            InterPro:IPR016046 InterPro:IPR022800 PANTHER:PTHR12882
            Pfam:PF06093 GeneTree:ENSGT00390000018559 GO:GO:0032044 CTD:6827
            EMBL:AAEX03006574 RefSeq:XP_853156.1 ProteinModelPortal:E2RAN9
            SMR:E2RAN9 Ensembl:ENSCAFT00000027758 GeneID:609757 KEGG:cfa:609757
            NextBio:20895343 Uniprot:E2RAN9
        Length = 117

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 44/104 (42%), Positives = 63/104 (60%)

Query:     8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
             +P    H LRACL C LVKT DQF   GC+NC  + +M  + E V DCT+ +F+GII++M
Sbjct:     6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMM 64

Query:    67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
              P  SW ++W R+  F PG Y ++V+  LP+ +    +   V Y
Sbjct:    65 SPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108


>UNIPROTKB|P63272 [details] [associations]
            symbol:SUPT4H1 "Transcription elongation factor SPT4"
            species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0034244 "negative regulation of transcription
            elongation from RNA polymerase II promoter" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0032785 "negative
            regulation of DNA-dependent transcription, elongation"
            evidence=IDA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0006368
            "transcription elongation from RNA polymerase II promoter"
            evidence=IDA;TAS] [GO:0046982 "protein heterodimerization activity"
            evidence=IPI] [GO:0032786 "positive regulation of DNA-dependent
            transcription, elongation" evidence=IDA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IDA] [GO:0032044 "DSIF complex" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=TAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=TAS] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=TAS] [GO:0005654 "nucleoplasm"
            evidence=TAS] [GO:0006366 "transcription from RNA polymerase II
            promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
            [GO:0016032 "viral reproduction" evidence=TAS] [GO:0050434
            "positive regulation of viral transcription" evidence=TAS]
            [GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_71
            InterPro:IPR009287 PIRSF:PIRSF025023 Reactome:REACT_116125
            GO:GO:0016032 GO:GO:0046872 GO:GO:0008270 GO:GO:0045944
            GO:GO:0003700 GO:GO:0006338 GO:GO:0000122 EMBL:CH471109
            GO:GO:0006368 GO:GO:0034244 Reactome:REACT_1788 GO:GO:0050434
            Reactome:REACT_1892 GO:GO:0032786 KO:K15171 eggNOG:COG5204
            HOGENOM:HOG000172685 OMA:SWVAKWQ InterPro:IPR016046
            InterPro:IPR022800 PANTHER:PTHR12882 Pfam:PF06093
            HOVERGEN:HBG055988 OrthoDB:EOG4P2Q3R GO:GO:0032044 CTD:6827
            GO:GO:0032785 EMBL:U38818 EMBL:U38817 EMBL:U43923 EMBL:AK129758
            EMBL:AK311986 EMBL:CR407663 EMBL:BC002802 IPI:IPI00002895
            RefSeq:NP_003159.1 UniGene:Hs.439481 PDB:3H7H PDBsum:3H7H
            ProteinModelPortal:P63272 SMR:P63272 IntAct:P63272
            MINT:MINT-1382313 STRING:P63272 PhosphoSite:P63272 DMDM:54039624
            PaxDb:P63272 PeptideAtlas:P63272 PRIDE:P63272 DNASU:6827
            Ensembl:ENST00000225504 Ensembl:ENST00000580947 GeneID:6827
            KEGG:hsa:6827 UCSC:uc002iwe.1 GeneCards:GC17M056422
            H-InvDB:HIX0014028 HGNC:HGNC:11467 MIM:603555 neXtProt:NX_P63272
            PharmGKB:PA36253 InParanoid:P63272 PhylomeDB:P63272
            EvolutionaryTrace:P63272 GenomeRNAi:6827 NextBio:26657
            ArrayExpress:P63272 Bgee:P63272 CleanEx:HS_SUPT4H1
            Genevestigator:P63272 GermOnline:ENSG00000108375 Uniprot:P63272
        Length = 117

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 44/104 (42%), Positives = 63/104 (60%)

Query:     8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
             +P    H LRACL C LVKT DQF   GC+NC  + +M  + E V DCT+ +F+GII++M
Sbjct:     6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMM 64

Query:    67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
              P  SW ++W R+  F PG Y ++V+  LP+ +    +   V Y
Sbjct:    65 SPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108


>UNIPROTKB|K7GKT6 [details] [associations]
            symbol:LOC100515097 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0032786 "positive regulation of DNA-dependent
            transcription, elongation" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR009287 PIRSF:PIRSF025023 InterPro:IPR016046
            InterPro:IPR022800 PANTHER:PTHR12882 Pfam:PF06093
            GeneTree:ENSGT00390000018559 EMBL:CU681830 RefSeq:XP_003131694.1
            Ensembl:ENSSSCT00000033569 GeneID:100515097 Uniprot:K7GKT6
        Length = 117

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 44/104 (42%), Positives = 63/104 (60%)

Query:     8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
             +P    H LRACL C LVKT DQF   GC+NC  + +M  + E V DCT+ +F+GII++M
Sbjct:     6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMM 64

Query:    67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
              P  SW ++W R+  F PG Y ++V+  LP+ +    +   V Y
Sbjct:    65 SPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108


>UNIPROTKB|Q4R941 [details] [associations]
            symbol:SUPT4H1 "Transcription elongation factor SPT4"
            species:9541 "Macaca fascicularis" [GO:0032044 "DSIF complex"
            evidence=ISS] InterPro:IPR009287 PIRSF:PIRSF025023 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006351 GO:GO:0032786 InterPro:IPR016046
            InterPro:IPR022800 PANTHER:PTHR12882 Pfam:PF06093
            HOVERGEN:HBG055988 GO:GO:0032044 EMBL:AB168256
            ProteinModelPortal:Q4R941 SMR:Q4R941 Uniprot:Q4R941
        Length = 117

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 44/104 (42%), Positives = 63/104 (60%)

Query:     8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
             +P    H LRACL C LVKT DQF   GC+NC  + +M  + E V DCT+ +F+GII++M
Sbjct:     6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMM 64

Query:    67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
              P  SW ++W R+  F PG Y ++V+  LP+ +    +   V Y
Sbjct:    65 SPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108


>MGI|MGI:107416 [details] [associations]
            symbol:Supt4a "suppressor of Ty 4A" species:10090 "Mus
            musculus" [GO:0000122 "negative regulation of transcription from
            RNA polymerase II promoter" evidence=ISO] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006368 "transcription elongation
            from RNA polymerase II promoter" evidence=ISO] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0032044 "DSIF complex" evidence=ISO]
            [GO:0032785 "negative regulation of DNA-dependent transcription,
            elongation" evidence=ISO] [GO:0032786 "positive regulation of
            DNA-dependent transcription, elongation" evidence=ISO] [GO:0034244
            "negative regulation of transcription elongation from RNA
            polymerase II promoter" evidence=IMP] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0046982 "protein heterodimerization activity" evidence=ISO]
            InterPro:IPR009287 PIRSF:PIRSF025023 MGI:MGI:107416 GO:GO:0046872
            GO:GO:0008270 GO:GO:0045944 GO:GO:0000122 EMBL:CH466556
            GO:GO:0006368 GO:GO:0034244 GO:GO:0032786 EMBL:CU393486 KO:K15171
            EMBL:AL604022 eggNOG:COG5204 OMA:SWVAKWQ InterPro:IPR016046
            InterPro:IPR022800 PANTHER:PTHR12882 Pfam:PF06093 EMBL:U43154
            EMBL:U96809 EMBL:AK167941 EMBL:BC024391 EMBL:BC061174 EMBL:BC087923
            EMBL:BC141092 IPI:IPI00124000 RefSeq:NP_033322.1 UniGene:Mm.622
            ProteinModelPortal:P63271 SMR:P63271 STRING:P63271
            PhosphoSite:P63271 PaxDb:P63271 PRIDE:P63271
            Ensembl:ENSMUST00000093955 GeneID:20922 KEGG:mmu:20922
            UCSC:uc007kuj.1 CTD:20922 GeneTree:ENSGT00390000018559
            HOVERGEN:HBG055988 InParanoid:B2KGH6 OrthoDB:EOG4P2Q3R
            ChiTaRS:SUPT4H1 NextBio:299829 Bgee:P63271 CleanEx:MM_SUPT4H1
            Genevestigator:P63271 GermOnline:ENSMUSG00000020485 GO:GO:0032044
            Uniprot:P63271
        Length = 117

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 44/104 (42%), Positives = 63/104 (60%)

Query:     8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
             +P    H LRACL C LVKT DQF   GC+NC  + +M  + E V DCT+ +F+GII++M
Sbjct:     6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMM 64

Query:    67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
              P  SW ++W R+  F PG Y ++V+  LP+ +    +   V Y
Sbjct:    65 SPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108


>RGD|1306372 [details] [associations]
            symbol:Supt4h1 "suppressor of Ty 4 homolog 1 (S. cerevisiae)"
            species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0006368 "transcription
            elongation from RNA polymerase II promoter" evidence=IEA;ISO]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0032044 "DSIF
            complex" evidence=IEA;ISO] [GO:0032785 "negative regulation of
            DNA-dependent transcription, elongation" evidence=ISO] [GO:0032786
            "positive regulation of DNA-dependent transcription, elongation"
            evidence=IEA;ISO] [GO:0034244 "negative regulation of transcription
            elongation from RNA polymerase II promoter" evidence=IEA;ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA;ISO] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA;ISO] InterPro:IPR009287
            PIRSF:PIRSF025023 RGD:1306372 GO:GO:0008270 GO:GO:0045944
            GO:GO:0000122 GO:GO:0006368 EMBL:CH473948 GO:GO:0034244
            GO:GO:0032786 KO:K15171 eggNOG:COG5204 HOGENOM:HOG000172685
            OMA:SWVAKWQ InterPro:IPR016046 InterPro:IPR022800 PANTHER:PTHR12882
            Pfam:PF06093 GeneTree:ENSGT00390000018559 HOVERGEN:HBG055988
            OrthoDB:EOG4P2Q3R GO:GO:0032044 CTD:6827 EMBL:BC168730
            IPI:IPI00369934 RefSeq:NP_001099298.2 UniGene:Rn.7906 SMR:B5DEM7
            STRING:B5DEM7 Ensembl:ENSRNOT00000010448 GeneID:287608
            KEGG:rno:287608 NextBio:626600 Genevestigator:B5DEM7 Uniprot:B5DEM7
        Length = 117

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 44/104 (42%), Positives = 63/104 (60%)

Query:     8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
             +P    H LRACL C LVKT DQF   GC+NC  + +M  + E V DCT+ +F+GII++M
Sbjct:     6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMM 64

Query:    67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
              P  SW ++W R+  F PG Y ++V+  LP+ +    +   V Y
Sbjct:    65 SPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108


>UNIPROTKB|Q5RFH5 [details] [associations]
            symbol:SUPT4H1 "Transcription elongation factor SPT4"
            species:9601 "Pongo abelii" [GO:0032044 "DSIF complex"
            evidence=ISS] InterPro:IPR009287 PIRSF:PIRSF025023 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006351 GO:GO:0032786 KO:K15171
            InterPro:IPR016046 InterPro:IPR022800 PANTHER:PTHR12882
            Pfam:PF06093 HOVERGEN:HBG055988 GO:GO:0032044 CTD:6827
            EMBL:CR857182 RefSeq:NP_001129015.1 UniGene:Pab.19873
            ProteinModelPortal:Q5RFH5 GeneID:100190855 KEGG:pon:100190855
            InParanoid:Q5RFH5 Uniprot:Q5RFH5
        Length = 117

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 44/104 (42%), Positives = 63/104 (60%)

Query:     8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
             +P    H LRACL C LVKT DQF   GC+NC  + +M  + E V DCT+ +F+GII++M
Sbjct:     6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMM 64

Query:    67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
              P  SW ++W R+  F PG Y ++V+  LP+ +    +   V Y
Sbjct:    65 SPGDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108


>ZFIN|ZDB-GENE-040718-214 [details] [associations]
            symbol:supt4h1 "suppressor of Ty 4 homolog 1 (S.
            cerevisiae)" species:7955 "Danio rerio" [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0032786 "positive regulation of
            DNA-dependent transcription, elongation" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0032044 "DSIF complex"
            evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR009287 PIRSF:PIRSF025023 ZFIN:ZDB-GENE-040718-214
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0032786 KO:K15171
            eggNOG:COG5204 HOGENOM:HOG000172685 OMA:SWVAKWQ InterPro:IPR016046
            InterPro:IPR022800 PANTHER:PTHR12882 Pfam:PF06093
            GeneTree:ENSGT00390000018559 HOVERGEN:HBG055988 OrthoDB:EOG4P2Q3R
            GO:GO:0032044 CTD:6827 EMBL:BC076290 IPI:IPI00492271
            RefSeq:NP_001002509.1 UniGene:Dr.79365 ProteinModelPortal:Q6DGQ0
            STRING:Q6DGQ0 PRIDE:Q6DGQ0 Ensembl:ENSDART00000048843 GeneID:436782
            KEGG:dre:436782 InParanoid:Q6DGQ0 NextBio:20831217 Bgee:Q6DGQ0
            Uniprot:Q6DGQ0
        Length = 117

 Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 43/90 (47%), Positives = 58/90 (64%)

Query:     8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
             +P    H LRACL C LVKT DQF   GC+NC  + +M  + E V +CT+ +F+G+I++M
Sbjct:     6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCESYLQMKGNREMVYECTSSSFDGVIAMM 64

Query:    67 DPTRSWAARWLRIGRFVPGCYTLAVSEALP 96
              P  SW A+W RIG F PG Y + V+  LP
Sbjct:    65 SPEDSWVAKWQRIGNFKPGVYAVTVTGRLP 94


>UNIPROTKB|E1C4X4 [details] [associations]
            symbol:SUPT4H1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0006368 "transcription
            elongation from RNA polymerase II promoter" evidence=IEA]
            [GO:0032044 "DSIF complex" evidence=IEA] [GO:0032786 "positive
            regulation of DNA-dependent transcription, elongation"
            evidence=IEA] [GO:0034244 "negative regulation of transcription
            elongation from RNA polymerase II promoter" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA] InterPro:IPR009287
            PIRSF:PIRSF025023 GO:GO:0008270 GO:GO:0045944 GO:GO:0000122
            GO:GO:0006368 GO:GO:0034244 GO:GO:0032786 KO:K15694 OMA:SWVAKWQ
            InterPro:IPR016046 InterPro:IPR022800 PANTHER:PTHR12882
            Pfam:PF06093 GeneTree:ENSGT00390000018559 GO:GO:0032044 CTD:6827
            EMBL:AADN02026094 IPI:IPI00578781 RefSeq:NP_001244215.1
            UniGene:Gga.7978 Ensembl:ENSGALT00000001394 GeneID:417470
            KEGG:gga:417470 NextBio:20921033 Uniprot:E1C4X4
        Length = 117

 Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 44/104 (42%), Positives = 63/104 (60%)

Query:     8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
             +P    H LRACL C LVKT +QF   GC+NC  + +M  + E V DCT+ +F+GII++M
Sbjct:     6 VPKDLRH-LRACLLCSLVKTLEQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMM 64

Query:    67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
              P  SW ++W RI  F PG Y ++V+  LP+ +    +   V Y
Sbjct:    65 SPEDSWVSKWQRISNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108


>UNIPROTKB|Q5HZ97 [details] [associations]
            symbol:supt4h1 "Transcription elongation factor SPT4"
            species:8355 "Xenopus laevis" [GO:0032044 "DSIF complex"
            evidence=ISS] InterPro:IPR009287 PIRSF:PIRSF025023 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006351 GO:GO:0032786 KO:K15171
            InterPro:IPR016046 InterPro:IPR022800 PANTHER:PTHR12882
            Pfam:PF06093 HOVERGEN:HBG055988 GO:GO:0032044 CTD:6827
            EMBL:BC089123 RefSeq:NP_001089206.1 UniGene:Xl.23755
            ProteinModelPortal:Q5HZ97 GeneID:734253 KEGG:xla:734253
            Xenbase:XB-GENE-977396 Uniprot:Q5HZ97
        Length = 117

 Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 44/104 (42%), Positives = 63/104 (60%)

Query:     8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
             +P    H LRACL C LVKT DQF   GC+NC  + +M  + E V DCT+ +F+GI+++M
Sbjct:     6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIVAMM 64

Query:    67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
              P  SW ++W RI  F PG Y ++V+  LP+ +    +   V Y
Sbjct:    65 SPDDSWVSKWQRITNFKPGVYAVSVTGRLPQGIVRELKSRGVVY 108


>MGI|MGI:1335090 [details] [associations]
            symbol:Supt4b "suppressor of Ty 4B" species:10090 "Mus
            musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0032786 "positive regulation of DNA-dependent transcription,
            elongation" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] InterPro:IPR009287 PIRSF:PIRSF025023 MGI:MGI:1335090
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0032786 KO:K15171
            InterPro:IPR016046 InterPro:IPR022800 PANTHER:PTHR12882
            Pfam:PF06093 HOVERGEN:HBG055988 GO:GO:0032044 EMBL:U96810
            IPI:IPI00129709 RefSeq:NP_035639.1 UniGene:Mm.7821
            ProteinModelPortal:Q9Z199 SMR:Q9Z199 STRING:Q9Z199 GeneID:100041294
            KEGG:mmu:100041294 UCSC:uc011xck.1 InParanoid:Q9Z199 NextBio:450899
            Genevestigator:Q9Z199 GermOnline:ENSMUSG00000075260 Uniprot:Q9Z199
        Length = 117

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 43/104 (41%), Positives = 62/104 (59%)

Query:     8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
             +P    H LRACL C LVKT DQF   GC+NC  + +M  + E V DCT+ +F+GI ++M
Sbjct:     6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGINAMM 64

Query:    67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
              P  SW ++W R+  F PG Y ++V+  LP+ +    +   V Y
Sbjct:    65 SPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108


>FB|FBgn0028683 [details] [associations]
            symbol:spt4 "spt4" species:7227 "Drosophila melanogaster"
            [GO:0016582 "non-covalent chromatin modification" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0003682 "chromatin
            binding" evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0032786 "positive regulation of DNA-dependent transcription,
            elongation" evidence=IEA] [GO:0008023 "transcription elongation
            factor complex" evidence=IDA] InterPro:IPR009287 PIRSF:PIRSF025023
            EMBL:AE013599 GO:GO:0046872 GO:GO:0008270 GO:GO:0045944
            GO:GO:0000122 GO:GO:0046982 GO:GO:0006368 GO:GO:0008023
            GO:GO:0005703 GO:GO:0005705 GO:GO:0032786 KO:K15171 eggNOG:COG5204
            OMA:SWVAKWQ InterPro:IPR016046 InterPro:IPR022800 PANTHER:PTHR12882
            Pfam:PF06093 GeneTree:ENSGT00390000018559 EMBL:AF108353
            EMBL:AF109133 EMBL:AY075424 RefSeq:NP_610802.1 UniGene:Dm.19918
            ProteinModelPortal:Q9TVQ5 SMR:Q9TVQ5 MINT:MINT-813567 STRING:Q9TVQ5
            PaxDb:Q9TVQ5 PRIDE:Q9TVQ5 EnsemblMetazoa:FBtr0087840 GeneID:36387
            KEGG:dme:Dmel_CG12372 UCSC:CG12372-RA CTD:36387 FlyBase:FBgn0028683
            InParanoid:Q9TVQ5 OrthoDB:EOG4BCC4G PhylomeDB:Q9TVQ5
            GenomeRNAi:36387 NextBio:798282 Bgee:Q9TVQ5 GermOnline:CG12372
            GO:GO:0032785 Uniprot:Q9TVQ5
        Length = 116

 Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 42/83 (50%), Positives = 56/83 (67%)

Query:    16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
             LRACL C LVK++DQF   GCENC  F +M  + + V D T+ NF+GII++  PT SW A
Sbjct:    13 LRACLVCSLVKSFDQFETDGCENCEEFLRMKNNKDNVYDHTSNNFDGIIALTTPTDSWVA 72

Query:    75 RWLRIGRFVPGCYTLAVSEALPE 97
             +W R+ RF  G Y ++VS  LP+
Sbjct:    73 KWQRLSRFTRGIYAISVSGTLPQ 95


>GENEDB_PFALCIPARUM|PF10_0293 [details] [associations]
            symbol:PF10_0293 "transcription factor,
            putative" species:5833 "Plasmodium falciparum" [GO:0003682
            "chromatin binding" evidence=ISS] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISS]
            InterPro:IPR009287 PIRSF:PIRSF025023 GO:GO:0005634 GO:GO:0008270
            GO:GO:0003682 EMBL:AE014185 GO:GO:0032786 KO:K15171
            HOGENOM:HOG000172685 OMA:SWVAKWQ InterPro:IPR016046
            InterPro:IPR022800 PANTHER:PTHR12882 Pfam:PF06093
            RefSeq:XP_001347577.1 ProteinModelPortal:Q8IJA5 PRIDE:Q8IJA5
            EnsemblProtists:PF10_0293:mRNA GeneID:810450 KEGG:pfa:PF10_0293
            EuPathDB:PlasmoDB:PF3D7_1030000 ProtClustDB:CLSZ2433182
            Uniprot:Q8IJA5
        Length = 133

 Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 37/88 (42%), Positives = 59/88 (67%)

Query:    15 ELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
             +LRACL CR++K+  +F ++GC NC F ++  D  R+ DCTT NFNG +++  P +SW A
Sbjct:    42 KLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMA 101

Query:    75 RWLRIGRFVPGCYTLAVSEALPEDLQNL 102
             ++  + ++ PG Y L V   LPE +++L
Sbjct:   102 QYNDLSKYAPGFYALQVIGELPESIRDL 129


>UNIPROTKB|Q8IJA5 [details] [associations]
            symbol:PF10_0293 "Transcription factor, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0003682 "chromatin
            binding" evidence=ISS] InterPro:IPR009287 PIRSF:PIRSF025023
            GO:GO:0005634 GO:GO:0008270 GO:GO:0003682 EMBL:AE014185
            GO:GO:0032786 KO:K15171 HOGENOM:HOG000172685 OMA:SWVAKWQ
            InterPro:IPR016046 InterPro:IPR022800 PANTHER:PTHR12882
            Pfam:PF06093 RefSeq:XP_001347577.1 ProteinModelPortal:Q8IJA5
            PRIDE:Q8IJA5 EnsemblProtists:PF10_0293:mRNA GeneID:810450
            KEGG:pfa:PF10_0293 EuPathDB:PlasmoDB:PF3D7_1030000
            ProtClustDB:CLSZ2433182 Uniprot:Q8IJA5
        Length = 133

 Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 37/88 (42%), Positives = 59/88 (67%)

Query:    15 ELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
             +LRACL CR++K+  +F ++GC NC F ++  D  R+ DCTT NFNG +++  P +SW A
Sbjct:    42 KLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMA 101

Query:    75 RWLRIGRFVPGCYTLAVSEALPEDLQNL 102
             ++  + ++ PG Y L V   LPE +++L
Sbjct:   102 QYNDLSKYAPGFYALQVIGELPESIRDL 129


>WB|WBGene00005014 [details] [associations]
            symbol:spt-4 species:6239 "Caenorhabditis elegans"
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0032786 "positive regulation of
            DNA-dependent transcription, elongation" evidence=IEA] [GO:0008340
            "determination of adult lifespan" evidence=IMP] InterPro:IPR009287
            PIRSF:PIRSF025023 GO:GO:0005634 GO:GO:0008340 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006351 GO:GO:0032786 KO:K15171 eggNOG:COG5204
            HOGENOM:HOG000172685 OMA:SWVAKWQ InterPro:IPR016046
            InterPro:IPR022800 PANTHER:PTHR12882 Pfam:PF06093
            GeneTree:ENSGT00390000018559 EMBL:FO080712 PIR:T33605
            RefSeq:NP_497135.1 ProteinModelPortal:Q9TZ93 SMR:Q9TZ93
            DIP:DIP-25841N MINT:MINT-1067406 STRING:Q9TZ93 PaxDb:Q9TZ93
            EnsemblMetazoa:F54C4.2 GeneID:175172 KEGG:cel:CELE_F54C4.2
            UCSC:F54C4.2 CTD:175172 WormBase:F54C4.2 InParanoid:Q9TZ93
            NextBio:887062 Uniprot:Q9TZ93
        Length = 120

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 42/111 (37%), Positives = 65/111 (58%)

Query:     6 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIIS 64
             A +P      LRACL C LVK+ + F++ GCENC     +  D E+V DCT+ N++G+I+
Sbjct:     3 ASVPADL-RNLRACLLCSLVKSVESFQKEGCENCEDVLHLKGDEEKVYDCTSANYDGMIA 61

Query:    65 VMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
              M    SW  +W ++ R V G Y ++VS  LP ++ +  +   V+Y P +R
Sbjct:    62 AMSNNESWVCKWQKMQRKVKGMYAISVSGVLPNNIVSELKSLGVRYKPNQR 112


>ASPGD|ASPL0000049906 [details] [associations]
            symbol:AN10280 species:162425 "Emericella nidulans"
            [GO:0032044 "DSIF complex" evidence=IEA] [GO:0033553 "rDNA
            heterochromatin" evidence=IEA] [GO:0005724 "nuclear telomeric
            heterochromatin" evidence=IEA] [GO:0031934 "mating-type region
            heterochromatin" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0000776 "kinetochore" evidence=IEA] [GO:0000182 "rDNA binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006342 "chromatin silencing" evidence=IEA]
            [GO:0007059 "chromosome segregation" evidence=IEA] [GO:0000398
            "mRNA splicing, via spliceosome" evidence=IEA] [GO:0008298
            "intracellular mRNA localization" evidence=IEA] [GO:0006370
            "7-methylguanosine mRNA capping" evidence=IEA] [GO:0090262
            "regulation of transcription-coupled nucleotide-excision repair"
            evidence=IEA] [GO:0034244 "negative regulation of transcription
            elongation from RNA polymerase II promoter" evidence=IEA]
            [GO:2001208 "negative regulation of transcription elongation from
            RNA polymerase I promoter" evidence=IEA] [GO:0032968 "positive
            regulation of transcription elongation from RNA polymerase II
            promoter" evidence=IEA] [GO:0006325 "chromatin organization"
            evidence=IEA] [GO:2000232 "regulation of rRNA processing"
            evidence=IEA] [GO:2001209 "positive regulation of transcription
            elongation from RNA polymerase I promoter" evidence=IEA]
            InterPro:IPR009287 PIRSF:PIRSF025023 GO:GO:0005634 EMBL:BN001307
            GO:GO:0008270 GO:GO:0032786 HOGENOM:HOG000172685 OMA:SWVAKWQ
            InterPro:IPR016046 InterPro:IPR022800 PANTHER:PTHR12882
            Pfam:PF06093 EnsemblFungi:CADANIAT00008937 Uniprot:C8VMU3
        Length = 120

 Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 36/98 (36%), Positives = 60/98 (61%)

Query:    16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
             LRAC+ C LV+ + +F   GC NC     +  +++ + +CT+  F G+++V DP  SW A
Sbjct:    13 LRACMVCSLVQLHSKFMREGCPNCDNVLGLRGNNDNIQECTSQVFEGLVTVNDPATSWVA 72

Query:    75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
             RW R+  +VPG Y + V+ +LP ++    ED  ++Y+P
Sbjct:    73 RWQRLDGYVPGTYAVKVTGSLPTEVIGHLEDAGIKYIP 110


>UNIPROTKB|F2Z535 [details] [associations]
            symbol:LOC100515097 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0046982 "protein heterodimerization activity"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0034244
            "negative regulation of transcription elongation from RNA
            polymerase II promoter" evidence=IEA] [GO:0032786 "positive
            regulation of DNA-dependent transcription, elongation"
            evidence=IEA] [GO:0032044 "DSIF complex" evidence=IEA] [GO:0006368
            "transcription elongation from RNA polymerase II promoter"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] InterPro:IPR009287 PIRSF:PIRSF025023
            GO:GO:0008270 GO:GO:0045944 GO:GO:0000122 GO:GO:0006368
            GO:GO:0034244 GO:GO:0032786 KO:K15171 OMA:SWVAKWQ
            InterPro:IPR016046 InterPro:IPR022800 PANTHER:PTHR12882
            Pfam:PF06093 GO:GO:0032044 EMBL:CU681830 UniGene:Ssc.5976
            ProteinModelPortal:F2Z535 SMR:F2Z535 Ensembl:ENSSSCT00000019201
            KEGG:ssc:100515097 Uniprot:F2Z535
        Length = 96

 Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
 Identities = 35/73 (47%), Positives = 48/73 (65%)

Query:     8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
             +P    H LRACL C LVKT DQF   GC+NC  + +M  + E V DCT+ +F+GII++M
Sbjct:     3 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMM 61

Query:    67 DPTRSWAARWLRI 79
              P  SW ++W R+
Sbjct:    62 SPEDSWVSKWQRV 74


>UNIPROTKB|J3QSB9 [details] [associations]
            symbol:SUPT4H1 "Transcription elongation factor SPT4"
            species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0032786 "positive
            regulation of DNA-dependent transcription, elongation"
            evidence=IEA] InterPro:IPR009287 PIRSF:PIRSF025023 GO:GO:0005634
            GO:GO:0008270 GO:GO:0032786 EMBL:AC004687 InterPro:IPR016046
            InterPro:IPR022800 PANTHER:PTHR12882 Pfam:PF06093 HGNC:HGNC:11467
            ProteinModelPortal:J3QSB9 Ensembl:ENST00000581540 Uniprot:J3QSB9
        Length = 108

 Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
 Identities = 33/86 (38%), Positives = 52/86 (60%)

Query:    26 KTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARWLRIGRFVP 84
             +T DQF   GC+NC  + +M  + E V DCT+ +F+GII++M P  SW ++W R+  F P
Sbjct:    14 QTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMMSPEDSWVSKWQRVSNFKP 73

Query:    85 GCYTLAVSEALPEDLQNLCEDERVQY 110
             G Y ++V+  LP+ +    +   V Y
Sbjct:    74 GVYAVSVTGRLPQGIVRELKSRGVAY 99


>SGD|S000003295 [details] [associations]
            symbol:SPT4 "Component of the universally conserved Spt4/5
            complex (DSIF complex)" species:4932 "Saccharomyces cerevisiae"
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA;IMP] [GO:0000991 "core RNA polymerase II binding
            transcription factor activity" evidence=IC] [GO:0032044 "DSIF
            complex" evidence=IPI] [GO:0007059 "chromosome segregation"
            evidence=IMP] [GO:0000182 "rDNA binding" evidence=IDA] [GO:0000775
            "chromosome, centromeric region" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0032786 "positive regulation of DNA-dependent
            transcription, elongation" evidence=IEA] [GO:0005694 "chromosome"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0033553 "rDNA
            heterochromatin" evidence=IDA] [GO:0006325 "chromatin organization"
            evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA] [GO:2000232
            "regulation of rRNA processing" evidence=IMP] [GO:2001209 "positive
            regulation of transcription elongation from RNA polymerase I
            promoter" evidence=IMP] [GO:0032968 "positive regulation of
            transcription elongation from RNA polymerase II promoter"
            evidence=IMP] [GO:0006370 "7-methylguanosine mRNA capping"
            evidence=IGI] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=IMP] [GO:0090262 "regulation of transcription-coupled
            nucleotide-excision repair" evidence=IGI] [GO:0008298
            "intracellular mRNA localization" evidence=IMP] [GO:2001208
            "negative regulation of transcription elongation from RNA
            polymerase I promoter" evidence=IGI] [GO:0005724 "nuclear telomeric
            heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
            heterochromatin" evidence=IDA] [GO:0001181 "core RNA polymerase I
            binding transcription factor activity" evidence=IC] [GO:0006342
            "chromatin silencing" evidence=IMP] InterPro:IPR009287
            PIRSF:PIRSF025023 SGD:S000003295 GO:GO:0007059 GO:GO:0000775
            EMBL:BK006941 GO:GO:0046872 GO:GO:0008270 GO:GO:0006342
            GO:GO:0008298 GO:GO:0000398 GO:GO:0006325 GO:GO:0000991
            GO:GO:0032968 GO:GO:0006370 GO:GO:2001209 GO:GO:0090262
            GO:GO:0000182 EMBL:DQ115391 RefSeq:NP_011585.3 GeneID:852962
            KEGG:sce:YGR071C RefSeq:NP_011577.3 GeneID:852955 KEGG:sce:YGR063C
            KO:K15171 GO:GO:0001181 GO:GO:2000232 eggNOG:COG5204
            HOGENOM:HOG000172685 OMA:SWVAKWQ InterPro:IPR016046
            InterPro:IPR022800 PANTHER:PTHR12882 Pfam:PF06093
            GeneTree:ENSGT00390000018559 GO:GO:0032044 OrthoDB:EOG4VQDZW
            EMBL:M83672 EMBL:AM296426 EMBL:AM296427 EMBL:AM296428 EMBL:AM296429
            EMBL:AM296430 EMBL:AM296431 EMBL:AM296432 EMBL:AM296433
            EMBL:AM296434 EMBL:AM296435 EMBL:AM296436 EMBL:AM296437
            EMBL:AM296438 EMBL:Z72848 EMBL:AY693090 PIR:S31176 PDB:2EXU
            PDBsum:2EXU ProteinModelPortal:P32914 SMR:P32914 DIP:DIP-2078N
            IntAct:P32914 MINT:MINT-531590 STRING:P32914 PaxDb:P32914
            PeptideAtlas:P32914 EnsemblFungi:YGR063C CYGD:YGR063c
            EvolutionaryTrace:P32914 NextBio:972717 Genevestigator:P32914
            GermOnline:YGR063C GO:GO:2001208 Uniprot:P32914
        Length = 102

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 30/86 (34%), Positives = 50/86 (58%)

Query:    17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
             RAC+ C +V+T ++F   GC NC     +E     ++CT+P+F G++ +  PT+SW A+W
Sbjct:     5 RACMLCGIVQTTNEFNRDGCPNCQGI-FEEAGVSTMECTSPSFEGLVGMCKPTKSWVAKW 63

Query:    77 LRIGRFVPGCYTLAVSEALPEDLQNL 102
             L +   + G Y + V   LP ++  L
Sbjct:    64 LSVDHSIAGMYAIKVDGRLPAEVVEL 89


>CGD|CAL0002982 [details] [associations]
            symbol:orf19.3947 species:5476 "Candida albicans" [GO:0000182
            "rDNA binding" evidence=IEA] [GO:0032044 "DSIF complex"
            evidence=IEA] [GO:0005724 "nuclear telomeric heterochromatin"
            evidence=IEA] [GO:0033553 "rDNA heterochromatin" evidence=IEA]
            [GO:0031934 "mating-type region heterochromatin" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0000776 "kinetochore"
            evidence=IEA] [GO:0006342 "chromatin silencing" evidence=IEA]
            [GO:0007059 "chromosome segregation" evidence=IEA] [GO:0000398
            "mRNA splicing, via spliceosome" evidence=IEA] [GO:0008298
            "intracellular mRNA localization" evidence=IEA] [GO:0006370
            "7-methylguanosine mRNA capping" evidence=IEA] [GO:0090262
            "regulation of transcription-coupled nucleotide-excision repair"
            evidence=IEA] [GO:0034244 "negative regulation of transcription
            elongation from RNA polymerase II promoter" evidence=IEA]
            [GO:2001208 "negative regulation of transcription elongation from
            RNA polymerase I promoter" evidence=IEA] [GO:0032968 "positive
            regulation of transcription elongation from RNA polymerase II
            promoter" evidence=IEA] [GO:0006325 "chromatin organization"
            evidence=IEA] [GO:2000232 "regulation of rRNA processing"
            evidence=IEA] [GO:2001209 "positive regulation of transcription
            elongation from RNA polymerase I promoter" evidence=IEA]
            InterPro:IPR009287 PIRSF:PIRSF025023 CGD:CAL0002982 GO:GO:0005634
            GO:GO:0000775 GO:GO:0046872 GO:GO:0008270 GO:GO:0006397
            GO:GO:0006351 EMBL:AACQ01000012 GO:GO:0032786 EMBL:AACQ01000011
            KO:K15171 eggNOG:COG5204 InterPro:IPR016046 InterPro:IPR022800
            PANTHER:PTHR12882 Pfam:PF06093 RefSeq:XP_721856.1
            RefSeq:XP_722016.1 ProteinModelPortal:Q5AK73 STRING:Q5AK73
            GeneID:3636300 GeneID:3636395 KEGG:cal:CaO19.11429
            KEGG:cal:CaO19.3947 Uniprot:Q5AK73
        Length = 112

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 35/99 (35%), Positives = 56/99 (56%)

Query:    17 RACLRCRLVKTYDQFRESGCENCP--FFKMDEDHERVVDCTTPNFNGIISVMDPTR-SWA 73
             RAC+ C +++    F + GC NC         D+++V DCT+P+F G++++ +  + SW 
Sbjct:     7 RACMLCGIIQPMKSFIDYGCPNCESLLHYQYNDNKQVQDCTSPSFEGLVALGEDNKGSWV 66

Query:    74 ARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
             ARWLRI  F  G Y + V+  LP  +    E++ V Y P
Sbjct:    67 ARWLRIDSFTAGLYAVKVNGKLPPSIIAELEEQNVIYRP 105


>DICTYBASE|DDB_G0285293 [details] [associations]
            symbol:spt4 "transcription initiation factor Spt4"
            species:44689 "Dictyostelium discoideum" [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISS]
            [GO:0006413 "translational initiation" evidence=IEA] [GO:0003743
            "translation initiation factor activity" evidence=IEA] [GO:0044351
            "macropinocytosis" evidence=RCA] dictyBase:DDB_G0285293
            GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0003700 GO:GO:0006357
            GO:GO:0003743 EMBL:AAFI02000077 KO:K15171 InterPro:IPR016046
            InterPro:IPR022800 PANTHER:PTHR12882 Pfam:PF06093
            RefSeq:XP_638317.1 ProteinModelPortal:Q54NF2 STRING:Q54NF2
            EnsemblProtists:DDB0238499 GeneID:8625035 KEGG:ddi:DDB_G0285293
            eggNOG:NOG278371 OMA:STTQNFE ProtClustDB:CLSZ2728931 Uniprot:Q54NF2
        Length = 91

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 38/84 (45%), Positives = 49/84 (58%)

Query:     8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMD 67
             +P+SF H  RAC  C LVK+  QF ++GCENC               TT NF GII++M+
Sbjct:    12 VPSSFKHA-RACTECGLVKSAQQFEDNGCENCSSSSSS---------TTQNFEGIIAIMN 61

Query:    68 PTRSWAARWLRIGRFVPGCYTLAV 91
             P  SW AR L+  R VPG Y L++
Sbjct:    62 PKESWIARRLQFERRVPGLYALSM 85


>POMBASE|SPBC21C3.16c [details] [associations]
            symbol:spt4 "transcription elongation factor complex
            subunit Spt4" species:4896 "Schizosaccharomyces pombe" [GO:0000775
            "chromosome, centromeric region" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=ISS]
            [GO:0006397 "mRNA processing" evidence=IPI] [GO:0008270 "zinc ion
            binding" evidence=ISO] [GO:0032044 "DSIF complex" evidence=IDA]
            [GO:0032786 "positive regulation of DNA-dependent transcription,
            elongation" evidence=IEA] [GO:0034244 "negative regulation of
            transcription elongation from RNA polymerase II promoter"
            evidence=IGI] InterPro:IPR009287 PIRSF:PIRSF025023
            PomBase:SPBC21C3.16c GO:GO:0005829 GO:GO:0000775 EMBL:CU329671
            GO:GO:0008270 GO:GO:0006397 GO:GO:0006351 GenomeReviews:CU329671_GR
            GO:GO:0006338 GO:GO:0000790 GO:GO:0034244 GO:GO:0032786 KO:K15171
            eggNOG:COG5204 HOGENOM:HOG000172685 InterPro:IPR016046
            InterPro:IPR022800 PANTHER:PTHR12882 Pfam:PF06093 GO:GO:0032044
            PIR:T50360 RefSeq:NP_596596.1 ProteinModelPortal:Q9P7K8
            STRING:Q9P7K8 EnsemblFungi:SPBC21C3.16c.1 GeneID:2540700
            KEGG:spo:SPBC21C3.16c OMA:MMSSEDS OrthoDB:EOG4VQDZW
            NextBio:20801823 Uniprot:Q9P7K8
        Length = 105

 Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
 Identities = 36/96 (37%), Positives = 46/96 (47%)

Query:    17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
             RACL C +V  +  F   GC N       +  + V   T+P F GI+++M PT SW ARW
Sbjct:    10 RACLICGIVLPHSVFANKGCPN-------DGVDDVETFTSPVFEGIMAMMSPTESWVARW 62

Query:    77 LRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
              RI  F PG Y   V   L ED+        + Y P
Sbjct:    63 QRIDTFTPGIYATRVQGVLNEDVVESLRRRGINYRP 98


>UNIPROTKB|D3DTZ5 [details] [associations]
            symbol:SUPT4H1 "Suppressor of Ty 4 homolog 1 (S.
            cerevisiae), isoform CRA_b" species:9606 "Homo sapiens" [GO:0034244
            "negative regulation of transcription elongation from RNA
            polymerase II promoter" evidence=IEA] EMBL:CH471109 GO:GO:0034244
            EMBL:AC004687 InterPro:IPR016046 InterPro:IPR022800
            PANTHER:PTHR12882 Pfam:PF06093 IPI:IPI00002895 UniGene:Hs.439481
            HGNC:HGNC:11467 ProteinModelPortal:D3DTZ5 Ensembl:ENST00000577396
            ArrayExpress:D3DTZ5 Bgee:D3DTZ5 Uniprot:D3DTZ5
        Length = 76

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 25/67 (37%), Positives = 40/67 (59%)

Query:    44 MDEDHERVVDCTTPNFNGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLC 103
             M  + E V DCT+ +F+GII++M P  SW ++W R+  F PG Y ++V+  LP+ +    
Sbjct:     1 MKGNREMVYDCTSSSFDGIIAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVREL 60

Query:   104 EDERVQY 110
             +   V Y
Sbjct:    61 KSRGVAY 67


>UNIPROTKB|J3QR04 [details] [associations]
            symbol:SUPT4H1 "Transcription elongation factor SPT4"
            species:9606 "Homo sapiens" [GO:0034244 "negative regulation of
            transcription elongation from RNA polymerase II promoter"
            evidence=IEA] EMBL:AC004687 InterPro:IPR016046 InterPro:IPR022800
            PANTHER:PTHR12882 Pfam:PF06093 HGNC:HGNC:11467
            ProteinModelPortal:J3QR04 Ensembl:ENST00000581166 Uniprot:J3QR04
        Length = 59

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 27/55 (49%), Positives = 35/55 (63%)

Query:     8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNG 61
             +P    H LRACL C LVKT DQF   GC+NC  + +M  + E V DCT+ +F+G
Sbjct:     6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDG 59


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.139   0.460    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      115       115   0.00091  102 3  11 22  0.44    30
                                                     29  0.45    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  27
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  155 KB (2093 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.44u 0.12s 12.56t   Elapsed:  00:00:01
  Total cpu time:  12.44u 0.12s 12.56t   Elapsed:  00:00:01
  Start:  Sat May 11 15:41:32 2013   End:  Sat May 11 15:41:33 2013

the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with SPT42 SPT42 SPT42 SPT4 homolog 2	protein from Arabidopsis thaliana	7.8e-55
BLAST match view associations BLAST with AT5G08565 AT5G08565 AT5G08565	protein from Arabidopsis thaliana	5.5e-54
BLAST match view associations BLAST with SUPT4H1 SUPT4H1 SUPT4H1 Transcription elongation factor SPT4	protein from Bos taurus	4.4e-20
BLAST match view associations BLAST with SUPT4H1 SUPT4H1 SUPT4H1 Uncharacterized protein	protein from Canis lupus familiaris	4.4e-20
BLAST match view associations BLAST with SUPT4H1 SUPT4H1 SUPT4H1 Transcription elongation factor SPT4	protein from Homo sapiens	4.4e-20
BLAST match view associations BLAST with LOC100515097 LOC100515097 LOC100515097 Uncharacterized protein	protein from Sus scrofa	4.4e-20
BLAST match view associations BLAST with SUPT4H1 SUPT4H1 SUPT4H1 Transcription elongation factor SPT4	protein from Macaca fascicularis	4.4e-20
BLAST match view associations BLAST with Supt4a Supt4a Supt4a suppressor of Ty 4A	protein from Mus musculus	4.4e-20
BLAST match view associations BLAST with Supt4h1 Supt4h1 Supt4h1 suppressor of Ty 4 homolog 1 (S. cerevisiae)	gene from Rattus norvegicus	4.4e-20
BLAST match view associations BLAST with SUPT4H1 SUPT4H1 SUPT4H1 Transcription elongation factor SPT4	protein from Pongo abelii	5.7e-20
BLAST match view associations BLAST with supt4h1 supt4h1 supt4h1 suppressor of Ty 4 homolog 1 (S. cerevisiae)	gene_product from Danio rerio	7.2e-20
BLAST match view associations BLAST with SUPT4H1 SUPT4H1 SUPT4H1 Uncharacterized protein	protein from Gallus gallus	9.2e-20
BLAST match view associations BLAST with supt4h1 supt4h1 supt4h1 Transcription elongation factor SPT4	protein from Xenopus laevis	9.2e-20
BLAST match view associations BLAST with Supt4b Supt4b Supt4b suppressor of Ty 4B	protein from Mus musculus	2.5e-19
BLAST match view associations BLAST with spt4 spt4 spt4	protein from Drosophila melanogaster	3.1e-19
BLAST match view associations BLAST with PF10_0293 PF10_0293 PF10_0293 transcription factor, putative	gene from Plasmodium falciparum	1.1e-18
BLAST match view associations BLAST with PF10_0293 PF10_0293 PF10_0293 Transcription factor, putative	protein from Plasmodium falciparum 3D7	1.1e-18
BLAST match view associations BLAST with spt-4 spt-4 spt-4	gene from Caenorhabditis elegans	2.2e-18
BLAST match view associations BLAST with LOC100515097 LOC100515097 LOC100515097 Uncharacterized protein	protein from Sus scrofa	2.0e-15
BLAST match view associations BLAST with SUPT4H1 SUPT4H1 SUPT4H1 Transcription elongation factor SPT4	protein from Homo sapiens	8.8e-15
BLAST match view associations BLAST with SPT4 SPT4 SPT4 Component of the universally conserved Spt4/5 complex (DSIF complex)	gene from Saccharomyces cerevisiae	3.8e-14
BLAST match view associations BLAST with orf19.3947 orf19.3947 orf19.3947	gene_product from Candida albicans	4.9e-14
BLAST match view associations BLAST with spt4 spt4 spt4 transcription initiation factor Spt4	gene from Dictyostelium discoideum	1.6e-13
BLAST match view associations BLAST with SUPT4H1 SUPT4H1 SUPT4H1 Transcription elongation factor SPT4	protein from Homo sapiens	6.6e-10
BLAST match view associations BLAST with SUPT4H1 SUPT4H1 SUPT4H1 Transcription elongation factor SPT4	protein from Homo sapiens	1.1e-09