BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046522
(115 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449455785|ref|XP_004145631.1| PREDICTED: transcription elongation factor SPT4 homolog 2-like
[Cucumis sativus]
Length = 116
Score = 235 bits (600), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 110/115 (95%), Positives = 112/115 (97%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN 60
M SAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVV+CTTPNFN
Sbjct: 1 MASAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVECTTPNFN 60
Query: 61 GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
GIISVMDP RSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCE+ERVQY PPKR
Sbjct: 61 GIISVMDPARSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEEERVQYAPPKR 115
>gi|255544187|ref|XP_002513156.1| suppressor of ty, putative [Ricinus communis]
gi|223548167|gb|EEF49659.1| suppressor of ty, putative [Ricinus communis]
Length = 116
Score = 234 bits (598), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 111/115 (96%), Positives = 112/115 (97%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN 60
MGS PAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN
Sbjct: 1 MGSVPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN 60
Query: 61 GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQ LCE+ERVQY PPKR
Sbjct: 61 GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQALCEEERVQYNPPKR 115
>gi|224109936|ref|XP_002315361.1| predicted protein [Populus trichocarpa]
gi|118489920|gb|ABK96757.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222864401|gb|EEF01532.1| predicted protein [Populus trichocarpa]
Length = 116
Score = 234 bits (596), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 110/115 (95%), Positives = 112/115 (97%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN 60
MGSA AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNF
Sbjct: 1 MGSAAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFT 60
Query: 61 GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
GIISVMDP+RSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERV Y+PPKR
Sbjct: 61 GIISVMDPSRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVPYIPPKR 115
>gi|224097390|ref|XP_002310913.1| predicted protein [Populus trichocarpa]
gi|222850733|gb|EEE88280.1| predicted protein [Populus trichocarpa]
Length = 116
Score = 231 bits (590), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 109/115 (94%), Positives = 111/115 (96%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN 60
MGSA AQIPTSFGHELRACLRCRLVKTYDQFRESGCENC FFKMDEDHERVVDCTTPNF
Sbjct: 1 MGSAAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCSFFKMDEDHERVVDCTTPNFT 60
Query: 61 GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
GIISVMDP+RSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERV Y+PPKR
Sbjct: 61 GIISVMDPSRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVPYIPPKR 115
>gi|225463799|ref|XP_002270173.1| PREDICTED: transcription elongation factor SPT4 homolog 2 [Vitis
vinifera]
gi|297742714|emb|CBI35348.3| unnamed protein product [Vitis vinifera]
Length = 114
Score = 230 bits (586), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 108/113 (95%), Positives = 111/113 (98%)
Query: 3 SAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGI 62
S AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGI
Sbjct: 2 SNAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGI 61
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
IS+MDP+RSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCE+ERVQYVPPKR
Sbjct: 62 ISMMDPSRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEEERVQYVPPKR 114
>gi|351723565|ref|NP_001238307.1| uncharacterized protein LOC100306659 [Glycine max]
gi|255629207|gb|ACU14948.1| unknown [Glycine max]
Length = 116
Score = 225 bits (574), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/115 (89%), Positives = 110/115 (95%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN 60
M +APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC FFKM+EDHERVVDCTTPNFN
Sbjct: 1 MATAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCSFFKMEEDHERVVDCTTPNFN 60
Query: 61 GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
GIISVMDP RSWAARWLRIG+FVPG YTLAVSEALPE++Q +CEDERVQY+PPKR
Sbjct: 61 GIISVMDPNRSWAARWLRIGKFVPGVYTLAVSEALPEEMQAICEDERVQYIPPKR 115
>gi|193872584|gb|ACF23020.1| ST5-18-3 [Eutrema halophilum]
Length = 132
Score = 223 bits (568), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 99/115 (86%), Positives = 112/115 (97%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN 60
MGSAPAQIPTSFGHELRACLRCRLVKTYDQFR++GCENCPFFKM+EDHER+V+ TTPNFN
Sbjct: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRDAGCENCPFFKMEEDHERIVEVTTPNFN 60
Query: 61 GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
GIISVMDP+RSWAARWLRIG+F PGCYTLAVSE LPE++Q+LC++ERVQY+PPKR
Sbjct: 61 GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPLPEEMQHLCQEERVQYMPPKR 115
>gi|356522132|ref|XP_003529703.1| PREDICTED: transcription elongation factor SPT4 homolog 1-like
[Glycine max]
Length = 116
Score = 223 bits (567), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 102/115 (88%), Positives = 109/115 (94%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN 60
M +APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC FFKM+EDHE VVDCTTPNFN
Sbjct: 1 MATAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCSFFKMEEDHELVVDCTTPNFN 60
Query: 61 GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
GIISVMDP RSWAARWLRIG+FVPG YTLAVSEALPE++Q +CEDERVQY+PPKR
Sbjct: 61 GIISVMDPNRSWAARWLRIGKFVPGVYTLAVSEALPEEMQAICEDERVQYIPPKR 115
>gi|18424735|ref|NP_568976.1| transcription elongation factor SPT4-2 [Arabidopsis thaliana]
gi|297793953|ref|XP_002864861.1| hypothetical protein ARALYDRAFT_919663 [Arabidopsis lyrata subsp.
lyrata]
gi|75165197|sp|Q94C60.1|SPT42_ARATH RecName: Full=Transcription elongation factor SPT4 homolog 2
gi|14334976|gb|AAK59665.1| unknown protein [Arabidopsis thaliana]
gi|17104635|gb|AAL34206.1| unknown protein [Arabidopsis thaliana]
gi|21536759|gb|AAM61091.1| unknown [Arabidopsis thaliana]
gi|297310696|gb|EFH41120.1| hypothetical protein ARALYDRAFT_919663 [Arabidopsis lyrata subsp.
lyrata]
gi|332010400|gb|AED97783.1| transcription elongation factor SPT4-2 [Arabidopsis thaliana]
Length = 116
Score = 219 bits (557), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 99/115 (86%), Positives = 111/115 (96%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN 60
MGSAPAQIPTSFGHELRACLRCRLVKTYDQFR++GCENCPFFKM+EDHER+V+ TTPNFN
Sbjct: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRDAGCENCPFFKMEEDHERIVEVTTPNFN 60
Query: 61 GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
GIISVMDP+RSWAARWLRIG+F PGCYTLAVSE LPE++Q+LC++ERVQYV PKR
Sbjct: 61 GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPLPEEMQHLCQEERVQYVLPKR 115
>gi|297806927|ref|XP_002871347.1| positive transcription elongation factor/ zinc ion binding protein
[Arabidopsis lyrata subsp. lyrata]
gi|297317184|gb|EFH47606.1| positive transcription elongation factor/ zinc ion binding protein
[Arabidopsis lyrata subsp. lyrata]
Length = 116
Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 96/115 (83%), Positives = 109/115 (94%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN 60
MG APAQIPTSFGHELRACLRCRLVKTYDQFR+SGCENCPFFKM+++HER+VD TTPNFN
Sbjct: 1 MGEAPAQIPTSFGHELRACLRCRLVKTYDQFRDSGCENCPFFKMEDEHERIVDVTTPNFN 60
Query: 61 GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
GIIS+MDP +SWAARWLRIG+F PGCYTLAVSEALPE++Q++C+ RVQYVPPKR
Sbjct: 61 GIISMMDPRKSWAARWLRIGKFAPGCYTLAVSEALPEEMQSICQQVRVQYVPPKR 115
>gi|449484583|ref|XP_004156922.1| PREDICTED: uncharacterized LOC101210450 [Cucumis sativus]
Length = 1093
Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 97/100 (97%), Positives = 98/100 (98%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN 60
M SAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVV+CTTPNFN
Sbjct: 1 MASAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVECTTPNFN 60
Query: 61 GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQ 100
GIISVMDP RSWAARWLRIGRFVPGCYTLAVSEALPEDLQ
Sbjct: 61 GIISVMDPARSWAARWLRIGRFVPGCYTLAVSEALPEDLQ 100
>gi|18415875|ref|NP_568201.1| transcription elongation factor SPT4-1 [Arabidopsis thaliana]
gi|166899087|sp|Q8LCQ3.3|SPT41_ARATH RecName: Full=Transcription elongation factor SPT4 homolog 1
gi|89001067|gb|ABD59123.1| At5g08565 [Arabidopsis thaliana]
gi|110737080|dbj|BAF00493.1| hypothetical protein [Arabidopsis thaliana]
gi|332003939|gb|AED91322.1| transcription elongation factor SPT4-1 [Arabidopsis thaliana]
Length = 116
Score = 215 bits (547), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 97/115 (84%), Positives = 108/115 (93%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN 60
MG APAQIPTSFGHELRACLRCRLVKTYDQFR+SGCENCPFFK+++DHER+VD TTPNFN
Sbjct: 1 MGEAPAQIPTSFGHELRACLRCRLVKTYDQFRDSGCENCPFFKIEDDHERIVDVTTPNFN 60
Query: 61 GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
GIIS+MDP RSWAARWLRIG+F PGCYTLAVSEALPE++Q +C+ RVQYVPPKR
Sbjct: 61 GIISMMDPRRSWAARWLRIGKFAPGCYTLAVSEALPEEMQFICQQARVQYVPPKR 115
>gi|388507196|gb|AFK41664.1| unknown [Lotus japonicus]
Length = 115
Score = 215 bits (547), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 97/115 (84%), Positives = 106/115 (92%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN 60
M PAQIPTSFGHELRACLRCRLVKTYDQFR+SGCENC FFKM+EDHER+ DCTTPNFN
Sbjct: 1 MSREPAQIPTSFGHELRACLRCRLVKTYDQFRDSGCENCQFFKMEEDHERIADCTTPNFN 60
Query: 61 GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
GIISVMDP+RSWAARWLRIG+F PG YTLAVSEALPE++Q +CE+ERVQY PPKR
Sbjct: 61 GIISVMDPSRSWAARWLRIGKFAPGVYTLAVSEALPEEMQAICEEERVQYAPPKR 115
>gi|21554358|gb|AAM63465.1| unknown [Arabidopsis thaliana]
Length = 116
Score = 211 bits (538), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 95/115 (82%), Positives = 107/115 (93%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN 60
MG APAQIPTSFGHELRACLRCRLVKTYDQFR+SGCENCPFFK+++DHER+VD TTPNF+
Sbjct: 1 MGEAPAQIPTSFGHELRACLRCRLVKTYDQFRDSGCENCPFFKIEDDHERIVDVTTPNFD 60
Query: 61 GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
GIIS+MDP RSWAARWLRIG+F PGCYTLAVSE LPE++Q +C+ RVQYVPPKR
Sbjct: 61 GIISMMDPRRSWAARWLRIGKFAPGCYTLAVSETLPEEMQFICQQARVQYVPPKR 115
>gi|357464201|ref|XP_003602382.1| Transcription elongation factor SPT4-like protein [Medicago
truncatula]
gi|357464209|ref|XP_003602386.1| Transcription elongation factor SPT4-like protein [Medicago
truncatula]
gi|355491430|gb|AES72633.1| Transcription elongation factor SPT4-like protein [Medicago
truncatula]
gi|355491434|gb|AES72637.1| Transcription elongation factor SPT4-like protein [Medicago
truncatula]
gi|388513531|gb|AFK44827.1| unknown [Medicago truncatula]
Length = 116
Score = 211 bits (538), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 97/115 (84%), Positives = 105/115 (91%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN 60
M SAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPF +M+ED ER V+CTTPNFN
Sbjct: 1 MASAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFLQMEEDQERAVECTTPNFN 60
Query: 61 GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
GIISVMDPTRSWAARWLRIG+FVPG YTLAVSEALP+D+Q +CED+ V Y PKR
Sbjct: 61 GIISVMDPTRSWAARWLRIGKFVPGVYTLAVSEALPDDMQAICEDKHVPYTLPKR 115
>gi|116792175|gb|ABK26260.1| unknown [Picea sitchensis]
Length = 115
Score = 198 bits (503), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 89/112 (79%), Positives = 100/112 (89%)
Query: 3 SAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGI 62
+ AQ+PTSFG ELRACLRCRL+KTYDQFRE+GCENCP F MD+DH+RVVDCTT NF+GI
Sbjct: 2 ATTAQVPTSFGRELRACLRCRLIKTYDQFRETGCENCPAFNMDQDHDRVVDCTTSNFSGI 61
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPK 114
IS MDPTRSW+ARWLRI RFVPGCYTLAVSEAL E++Q +CED VQYVPPK
Sbjct: 62 ISCMDPTRSWSARWLRISRFVPGCYTLAVSEALSEEMQAVCEDNNVQYVPPK 113
>gi|226510456|ref|NP_001150575.1| transcription elongation factor SPT4 [Zea mays]
gi|195640310|gb|ACG39623.1| transcription elongation factor SPT4 [Zea mays]
gi|414590937|tpg|DAA41508.1| TPA: transcription elongation factor SPT4 [Zea mays]
Length = 129
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 88/110 (80%), Positives = 100/110 (90%)
Query: 6 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISV 65
A+IPTSFG ELRACLRCRLVKTYDQFRE+GCENCPF +MD +H+ VV+CTTPNF GIIS+
Sbjct: 19 AEIPTSFGPELRACLRCRLVKTYDQFRENGCENCPFLEMDREHDNVVNCTTPNFTGIISL 78
Query: 66 MDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
MDP+RSWAARWLRIGRF+PGCYTLAVSE LPE+ Q +C+D VQYVPPKR
Sbjct: 79 MDPSRSWAARWLRIGRFIPGCYTLAVSEELPEEYQGICQDNNVQYVPPKR 128
>gi|326522414|dbj|BAK07669.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 127
Score = 194 bits (493), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 88/110 (80%), Positives = 96/110 (87%)
Query: 6 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISV 65
AQIP SFGHELRACLRCRLVKTYDQFRE+GCENCPF MD+D + VV CTT NF GIIS+
Sbjct: 17 AQIPNSFGHELRACLRCRLVKTYDQFRENGCENCPFLDMDKDRDNVVSCTTANFTGIISL 76
Query: 66 MDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
MDPTRSWAARWLRIGRF+PGCYTLAVSE LPE+ Q +C+D VQY PPKR
Sbjct: 77 MDPTRSWAARWLRIGRFIPGCYTLAVSEELPEEYQGMCQDNNVQYFPPKR 126
>gi|22535674|dbj|BAC10848.1| unknown protein [Oryza sativa Japonica Group]
gi|218200050|gb|EEC82477.1| hypothetical protein OsI_26922 [Oryza sativa Indica Group]
gi|222637486|gb|EEE67618.1| hypothetical protein OsJ_25179 [Oryza sativa Japonica Group]
Length = 131
Score = 194 bits (493), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 87/110 (79%), Positives = 97/110 (88%)
Query: 6 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISV 65
AQIPTSFGHELRACLRCRLVKTYDQF E GCENCPF M+ DH+ VV+CTTPNF GIISV
Sbjct: 21 AQIPTSFGHELRACLRCRLVKTYDQFMEQGCENCPFLDMERDHDNVVNCTTPNFTGIISV 80
Query: 66 MDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
MDP RSWAARWLRIG+F+PGCYTLAV+E LPE+ Q++C+D VQY PPKR
Sbjct: 81 MDPGRSWAARWLRIGKFIPGCYTLAVAEELPEEYQSVCQDNNVQYFPPKR 130
>gi|242050924|ref|XP_002463206.1| hypothetical protein SORBIDRAFT_02g039750 [Sorghum bicolor]
gi|241926583|gb|EER99727.1| hypothetical protein SORBIDRAFT_02g039750 [Sorghum bicolor]
Length = 128
Score = 191 bits (486), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 85/110 (77%), Positives = 100/110 (90%)
Query: 6 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISV 65
A+IPTSFG ELRACLRCRLVKTYDQFR++GCENCPF +M+ +H+ VV+CTTPNF GIIS+
Sbjct: 18 AEIPTSFGPELRACLRCRLVKTYDQFRQNGCENCPFLEMEREHDNVVNCTTPNFTGIISL 77
Query: 66 MDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
MDP+RSWAARWLRIGRF+PGCYTLAVSE LPE+ Q +C++ VQYVPPKR
Sbjct: 78 MDPSRSWAARWLRIGRFIPGCYTLAVSEELPEEYQGICQENNVQYVPPKR 127
>gi|357121976|ref|XP_003562692.1| PREDICTED: transcription elongation factor SPT4 homolog 1-like
[Brachypodium distachyon]
Length = 131
Score = 181 bits (459), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 82/110 (74%), Positives = 97/110 (88%), Gaps = 1/110 (0%)
Query: 6 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISV 65
A+IPTSFGHELRACLRCRLVKT+DQFRE+GCENCPF +MD++ + V +CTT NF GIIS+
Sbjct: 23 AEIPTSFGHELRACLRCRLVKTFDQFRENGCENCPFLEMDKE-DNVPNCTTANFTGIISL 81
Query: 66 MDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
MDP+RSWAARWLRI +F+PGCYTLAVSE LPE+ Q +C+D V YVPPKR
Sbjct: 82 MDPSRSWAARWLRIAKFIPGCYTLAVSEELPEEYQGICQDNNVHYVPPKR 131
>gi|334187526|ref|NP_001190264.1| transcription elongation factor SPT4-1 [Arabidopsis thaliana]
gi|332003940|gb|AED91323.1| transcription elongation factor SPT4-1 [Arabidopsis thaliana]
Length = 116
Score = 178 bits (451), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 83/115 (72%), Positives = 94/115 (81%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN 60
MG APAQIPTSFGHELRACLRCRLVKTYDQFR+SGCENCPFFK+++DHER+VD TTPNFN
Sbjct: 1 MGEAPAQIPTSFGHELRACLRCRLVKTYDQFRDSGCENCPFFKIEDDHERIVDVTTPNFN 60
Query: 61 GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
G +S L G+F PGCYTLAVSEALPE++Q +C+ RVQYVPPKR
Sbjct: 61 GFVSDRREINLTHCNILFPGKFAPGCYTLAVSEALPEEMQFICQQARVQYVPPKR 115
>gi|302813002|ref|XP_002988187.1| hypothetical protein SELMODRAFT_235476 [Selaginella moellendorffii]
gi|300143919|gb|EFJ10606.1| hypothetical protein SELMODRAFT_235476 [Selaginella moellendorffii]
Length = 116
Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 73/108 (67%), Positives = 91/108 (84%)
Query: 5 PAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIIS 64
AQ+P S G +LRACLRCRLVKTYDQF ++GCENC FF M+++H+R+++CTT NF+G+IS
Sbjct: 8 AAQVPASLGRDLRACLRCRLVKTYDQFNKNGCENCKFFHMEQEHDRILECTTVNFSGLIS 67
Query: 65 VMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
MDPT SWAARWLRI +FVPGCY LAVS L ED+QN+CED ++YVP
Sbjct: 68 SMDPTGSWAARWLRISKFVPGCYALAVSGVLNEDMQNICEDNNIKYVP 115
>gi|168026051|ref|XP_001765546.1| transcription elongation factor SPT4 [Physcomitrella patens subsp.
patens]
gi|162683184|gb|EDQ69596.1| transcription elongation factor SPT4 [Physcomitrella patens subsp.
patens]
Length = 113
Score = 171 bits (432), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 72/110 (65%), Positives = 91/110 (82%)
Query: 3 SAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGI 62
+ AQ+PTSFG ELR CLRC L+KTYDQF+E+GCENC FF MD+DH+RV++CTTPNF G+
Sbjct: 2 AGAAQVPTSFGRELRVCLRCSLMKTYDQFKENGCENCLFFNMDKDHDRVLECTTPNFAGV 61
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
IS MDPT SWA+RWLRI +FVPGCY L V+ L E++Q +C+D ++YVP
Sbjct: 62 ISCMDPTSSWASRWLRISKFVPGCYALTVTGELSEEMQAICDDNNIRYVP 111
>gi|302760109|ref|XP_002963477.1| hypothetical protein SELMODRAFT_80011 [Selaginella moellendorffii]
gi|300168745|gb|EFJ35348.1| hypothetical protein SELMODRAFT_80011 [Selaginella moellendorffii]
Length = 117
Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 74/109 (67%), Positives = 92/109 (84%), Gaps = 1/109 (0%)
Query: 5 PAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIIS 64
AQ+P S G +LRACLRCRLVKTYDQF ++GCENC FF M+++H+R+++CTT NF+G+IS
Sbjct: 8 AAQVPASLGRDLRACLRCRLVKTYDQFNKNGCENCKFFHMEQEHDRILECTTVNFSGLIS 67
Query: 65 VMDPTRSWAARWLRI-GRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
MDPT SWAARWLRI G+FVPGCY LAVS L ED+QN+CED ++YVP
Sbjct: 68 SMDPTGSWAARWLRITGKFVPGCYALAVSGVLNEDMQNICEDNNIKYVP 116
>gi|334188606|ref|NP_001190609.1| transcription elongation factor SPT4-2 [Arabidopsis thaliana]
gi|332010401|gb|AED97784.1| transcription elongation factor SPT4-2 [Arabidopsis thaliana]
Length = 94
Score = 159 bits (402), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/79 (91%), Positives = 78/79 (98%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN 60
MGSAPAQIPTSFGHELRACLRCRLVKTYDQFR++GCENCPFFKM+EDHER+V+ TTPNFN
Sbjct: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRDAGCENCPFFKMEEDHERIVEVTTPNFN 60
Query: 61 GIISVMDPTRSWAARWLRI 79
GIISVMDP+RSWAARWLRI
Sbjct: 61 GIISVMDPSRSWAARWLRI 79
>gi|297607640|ref|NP_001060323.2| Os07g0623400 [Oryza sativa Japonica Group]
gi|255677982|dbj|BAF22237.2| Os07g0623400 [Oryza sativa Japonica Group]
Length = 101
Score = 144 bits (362), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 65/78 (83%), Positives = 69/78 (88%)
Query: 6 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISV 65
AQIPTSFGHELRACLRCRLVKTYDQF E GCENCPF M+ DH+ VV+CTTPNF GIISV
Sbjct: 21 AQIPTSFGHELRACLRCRLVKTYDQFMEQGCENCPFLDMERDHDNVVNCTTPNFTGIISV 80
Query: 66 MDPTRSWAARWLRIGRFV 83
MDP RSWAARWLRIG +V
Sbjct: 81 MDPGRSWAARWLRIGEYV 98
>gi|255072603|ref|XP_002499976.1| transcription elongation-nucleosome displacement protein
[Micromonas sp. RCC299]
gi|226515238|gb|ACO61234.1| transcription elongation-nucleosome displacement protein
[Micromonas sp. RCC299]
Length = 118
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 75/100 (75%)
Query: 6 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISV 65
AQ P F RAC RC+LVKTY+QF E GC+NC FF+M +D +RV +CTTP+++G++SV
Sbjct: 13 AQPPREFMKHTRACFRCKLVKTYEQFFEEGCDNCAFFQMIDDRDRVAECTTPSYSGVVSV 72
Query: 66 MDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCED 105
+DP SW A+WLR+G+ VPGCY L +++ +PE +Q E+
Sbjct: 73 IDPKSSWTAKWLRLGKMVPGCYALEINDDMPEGIQAEIEE 112
>gi|223973155|gb|ACN30765.1| unknown [Zea mays]
Length = 73
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 64/72 (88%)
Query: 44 MDEDHERVVDCTTPNFNGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLC 103
MD +H+ VV+CTTPNF GIIS+MDP+RSWAARWLRIGRF+PGCYTLAVSE LPE+ Q +C
Sbjct: 1 MDREHDNVVNCTTPNFTGIISLMDPSRSWAARWLRIGRFIPGCYTLAVSEELPEEYQGIC 60
Query: 104 EDERVQYVPPKR 115
+D VQYVPPKR
Sbjct: 61 QDNNVQYVPPKR 72
>gi|20218827|emb|CAC84498.1| hypothetical protein [Pinus pinaster]
Length = 73
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 63/72 (87%)
Query: 44 MDEDHERVVDCTTPNFNGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLC 103
MD+DH+RVVDCTT +F+GIIS MDPTRSWAARWLRI RFVPGCYTLAVSEAL E++Q +C
Sbjct: 1 MDQDHDRVVDCTTSSFSGIISCMDPTRSWAARWLRISRFVPGCYTLAVSEALSEEMQAVC 60
Query: 104 EDERVQYVPPKR 115
ED QYVPPK
Sbjct: 61 EDNNAQYVPPKH 72
>gi|307106455|gb|EFN54701.1| hypothetical protein CHLNCDRAFT_135349 [Chlorella variabilis]
Length = 124
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 76/113 (67%), Gaps = 5/113 (4%)
Query: 6 AQIPTSFGHELRACLRCRLVKTYDQFRES-----GCENCPFFKMDEDHERVVDCTTPNFN 60
AQ PT G LR C+ CRLVKT++QF E GCENCP+ M+ D ERV DCTT +F
Sbjct: 11 AQPPTELGKTLRCCVPCRLVKTFEQFYEQASRRLGCENCPYLDMENDRERVYDCTTSDFK 70
Query: 61 GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPP 113
G++SV+DP SW A+WL + +FVPGCY L+V LP ++++ E+ +++ P
Sbjct: 71 GMVSVVDPKTSWCAKWLHLRKFVPGCYALSVQAELPNHIEDILENRGIKWRLP 123
>gi|384249741|gb|EIE23222.1| transcription elongation factor SPT4 [Coccomyxa subellipsoidea
C-169]
Length = 115
Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 66/97 (68%)
Query: 6 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISV 65
A++PT FG L AC+ C LVKT DQF GCENC F M+ D +R ++CTT F G++SV
Sbjct: 7 AEVPTDFGKNLCACISCHLVKTLDQFAGGGCENCGFLGMEGDKDRCLECTTVAFQGMVSV 66
Query: 66 MDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNL 102
+DP SW A+WL + + VPGCY L+V +P D++ L
Sbjct: 67 IDPASSWCAKWLHLSKLVPGCYALSVQVEVPPDIKEL 103
>gi|301115087|ref|XP_002999313.1| transcription elongation factor SPT4 [Phytophthora infestans T30-4]
gi|262111407|gb|EEY69459.1| transcription elongation factor SPT4 [Phytophthora infestans T30-4]
Length = 126
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 71/105 (67%), Gaps = 1/105 (0%)
Query: 6 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISV 65
A IP +F ELRAC+ C LVKT+ QF ++GCENC F +M ++ +RV +CT+ F G+I++
Sbjct: 19 ADIPNTF-RELRACMTCSLVKTFTQFYDTGCENCAFLQMADNRQRVAECTSAYFEGMIAM 77
Query: 66 MDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
M P SW A+W RI R +PG Y ++VS LP+ ++ ED + Y
Sbjct: 78 MQPKESWVAKWQRIVRLIPGIYAVSVSGELPDSIKRFLEDRNIPY 122
>gi|303271649|ref|XP_003055186.1| transcription elongation-nucleosome displacement protein Spt4
[Micromonas pusilla CCMP1545]
gi|226463160|gb|EEH60438.1| transcription elongation-nucleosome displacement protein Spt4
[Micromonas pusilla CCMP1545]
Length = 125
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 73/104 (70%), Gaps = 2/104 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQ--FRESGCENCPFFKMDEDHERVVDCTTPNFNG 61
+ A P F RAC RC+LVKT++Q F E GC+NC FF+M++D +RV +CTTP ++G
Sbjct: 16 SAADPPLEFVKHTRACFRCKLVKTFEQARFFEKGCDNCAFFQMNDDRDRVAECTTPAYSG 75
Query: 62 IISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCED 105
I+SV+DP SW A+W+R+ + VPGCY L +++ +P+ + E+
Sbjct: 76 IVSVLDPKSSWCAKWMRLNKAVPGCYALEINDDVPDGIAGEIEE 119
>gi|348683757|gb|EGZ23572.1| putative transcription protein [Phytophthora sojae]
Length = 126
Score = 114 bits (285), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 71/105 (67%), Gaps = 1/105 (0%)
Query: 6 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISV 65
A IP +F ELRAC+ C L+KT+ QF ++GCENC F +M ++ +RV +CT+ F G+I++
Sbjct: 19 ADIPNTF-RELRACMTCSLIKTFTQFYDTGCENCAFLQMADNRQRVAECTSAYFEGMIAM 77
Query: 66 MDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
M P SW A+W RI R +PG Y ++VS LP+ ++ ED + Y
Sbjct: 78 MQPKESWVAKWQRIVRLIPGIYAVSVSGELPDSIKRFLEDRNIPY 122
>gi|10177048|dbj|BAB10460.1| unnamed protein product [Arabidopsis thaliana]
Length = 76
Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/67 (73%), Positives = 58/67 (86%)
Query: 44 MDEDHERVVDCTTPNFNGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLC 103
M+EDHER+V+ TTPNFNGIISVMDP+RSWAARWLRIG+F PGCYTLAVSE LPE++Q
Sbjct: 1 MEEDHERIVEVTTPNFNGIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPLPEEMQASR 60
Query: 104 EDERVQY 110
ED+ +
Sbjct: 61 EDQVFHF 67
>gi|71032843|ref|XP_766063.1| transcription factor [Theileria parva strain Muguga]
gi|68353020|gb|EAN33780.1| transcription factor, putative [Theileria parva]
Length = 140
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 65/91 (71%), Gaps = 4/91 (4%)
Query: 15 ELRACLRCRLVKTYDQ----FRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTR 70
+LRAC+ CRL+ + DQ F E+GC NC F +MD DH R +DCT+ NFNG IS+MDP +
Sbjct: 46 KLRACISCRLIMSEDQVSVTFYENGCGNCSFLQMDGDHRRTLDCTSANFNGFISIMDPQK 105
Query: 71 SWAARWLRIGRFVPGCYTLAVSEALPEDLQN 101
SW+AR+ + +PGCY ++V+ LPE +++
Sbjct: 106 SWSARYNNLSDLIPGCYAISVNGTLPESIKD 136
>gi|298713246|emb|CBJ33539.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 135
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGII 63
A A+IPTS LRAC RC LVK DQF GCENCPF +M+ D RV DCTT F+G+I
Sbjct: 21 AGAEIPTSL-KGLRACKRCSLVKGNDQFVNHGCENCPFLQMESDQARVQDCTTTYFSGLI 79
Query: 64 SVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
++MDP SW +W RI PG Y + V LP ++ E +R+ +
Sbjct: 80 AMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPF 126
>gi|403220868|dbj|BAM39001.1| transcription factor [Theileria orientalis strain Shintoku]
Length = 140
Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 64/89 (71%)
Query: 13 GHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSW 72
G +LRAC+RCRL+ T DQF E+GC NC +MD D R +DCT+ NF+G +S+MDP +SW
Sbjct: 48 GLKLRACIRCRLIMTEDQFYENGCGNCTHLQMDGDRRRTLDCTSSNFSGFLSIMDPEKSW 107
Query: 73 AARWLRIGRFVPGCYTLAVSEALPEDLQN 101
+A++ + +PGCY ++V+ LPE + +
Sbjct: 108 SAKYNNLINLIPGCYAISVNGTLPESIND 136
>gi|223995931|ref|XP_002287639.1| transcription initiation protein spt4-like protein [Thalassiosira
pseudonana CCMP1335]
gi|220976755|gb|EED95082.1| transcription initiation protein spt4-like protein [Thalassiosira
pseudonana CCMP1335]
Length = 117
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
Query: 6 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISV 65
A +PTS +RAC+RC ++KT DQF E GCENCPF M +HER CTT F G ++V
Sbjct: 1 ASVPTSL-KGVRACMRCGIIKTLDQFLEYGCENCPFLDMAGNHERCNLCTTAFFEGQVAV 59
Query: 66 MDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
MDP+ SW A+W+RI ++PG Y ++V+ D++ E+ ++
Sbjct: 60 MDPSESWTAKWIRIDAYLPGVYAISVTGQFDRDIEEELENRGCRW 104
>gi|429329074|gb|AFZ80833.1| transcription initiation protein Spt4 family member protein
[Babesia equi]
Length = 134
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 62/85 (72%)
Query: 13 GHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSW 72
G +LRAC+ CRL+ T QF E+GC NC F +MD D R +DCT+ NF+G+I++M+P +SW
Sbjct: 42 GLKLRACISCRLILTETQFYENGCGNCGFLQMDGDRRRTLDCTSANFSGLIAIMEPQKSW 101
Query: 73 AARWLRIGRFVPGCYTLAVSEALPE 97
+AR+ + +PGCY ++V+ LPE
Sbjct: 102 SARYNNLSDVIPGCYAISVTGVLPE 126
>gi|302850068|ref|XP_002956562.1| hypothetical protein VOLCADRAFT_107303 [Volvox carteri f.
nagariensis]
gi|300258089|gb|EFJ42329.1| hypothetical protein VOLCADRAFT_107303 [Volvox carteri f.
nagariensis]
Length = 122
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 68/96 (70%), Gaps = 4/96 (4%)
Query: 15 ELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWA 73
L C CRL+K+ +QF +SGC+NC F E D TTPNF+G+IS+MDP SWA
Sbjct: 26 NLVCCYVCRLIKSRNQFHDSGCDNCKNLFGPSISFE---DYTTPNFSGMISIMDPKASWA 82
Query: 74 ARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQ 109
+WL +GR+VPGCY +AV++ +P+DLQ++ E++ ++
Sbjct: 83 CKWLHLGRYVPGCYAMAVNDDVPDDLQDILENKGIK 118
>gi|256072785|ref|XP_002572714.1| transcription elongation factor SPT4-like protein [Schistosoma
mansoni]
gi|108861877|gb|ABG21840.1| transcription elongation factor SPT4-like protein [Schistosoma
mansoni]
gi|353229081|emb|CCD75252.1| transcription elongation factor SPT4-like protein [Schistosoma
mansoni]
Length = 117
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
IP+ +LRACL C LVKT +QF+ +GCENC F KM D E+V +C++ NF+G++++M
Sbjct: 7 IPSEL-RQLRACLLCGLVKTLNQFQLNGCENCEDFLKMQGDREKVYECSSANFDGLLAMM 65
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
P SW ARW I + PG Y ++V +LP D+ + + + Y
Sbjct: 66 SPNDSWVARWQMIDKLTPGVYAISVYGSLPSDIVHYLRSKGISY 109
>gi|189502924|gb|ACE06843.1| unknown [Schistosoma japonicum]
Length = 117
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
IP+ +LRACL C LVKT +QF+ +GCENC F KM D E+V +C++ NF+G++++M
Sbjct: 7 IPSEL-RQLRACLLCGLVKTLNQFQLNGCENCEDFLKMQGDREKVYECSSANFDGLLAMM 65
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
P SW ARW I + PG Y ++V +LP D+ + + + Y
Sbjct: 66 SPNDSWVARWQMIDKLTPGVYAISVYGSLPSDVVHYLRSKGISY 109
>gi|452823014|gb|EME30028.1| transcription elongation factor SPT4-like protein [Galdieria
sulphuraria]
Length = 131
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 68/106 (64%), Gaps = 5/106 (4%)
Query: 13 GHELRACLRCRLVKTYDQFRESGCENCPFFKMD---EDHERVVDCTTPNFNGIISVMDPT 69
++LRAC+ C LVKT++QF GCENCP +D D ERV TT F+G++SV P
Sbjct: 19 ANKLRACMVCGLVKTFNQFVVFGCENCPSL-IDVRVADRERVATVTTSLFSGLVSVTRPL 77
Query: 70 RSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
SW A+W R+ R VPGCY +AV ALPED+ E++ +Q VP R
Sbjct: 78 DSWVAKWQRVSRLVPGCYAIAVRAALPEDILEELEEKGLQ-VPRTR 122
>gi|29841363|gb|AAP06395.1| similar to GenBank Accession Number BC002802 suppressor of Ty
[Schistosoma japonicum]
Length = 117
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
IP+ +LRACL C LVKT +QF+ +GCENC F KM D E+V +C++ NF+G++++M
Sbjct: 7 IPSEL-RQLRACLLCGLVKTLNQFQLNGCENCEDFLKMQGDREKVYECSSANFDGLLAMM 65
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
P SW ARW I + PG Y ++V +LP D+ + + + Y
Sbjct: 66 SPNDSWVARWQMIDKLTPGVYAISVYGSLPTDVVHYLRSKGISY 109
>gi|397648167|gb|EJK78022.1| hypothetical protein THAOC_00107 [Thalassiosira oceanica]
Length = 138
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGII 63
A A +P+S LRAC+RC +VKT++QF E GCENC +++ + ER CTT F G +
Sbjct: 23 AQASVPSSM-KGLRACMRCGIVKTFEQFIEQGCENCAILELEGNSERCNQCTTAFFEGQV 81
Query: 64 SVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQN 101
+V DP SW A+WLR+ RF+PG Y ++++ +D++
Sbjct: 82 AVADPQDSWTAKWLRVDRFLPGVYAISITGQFSKDVEG 119
>gi|405959295|gb|EKC25347.1| Transcription elongation factor SPT4 [Crassostrea gigas]
Length = 117
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C LVKT +QF GC+NC + ++ + ERV DCT+ NF+G+I++M P SW A
Sbjct: 13 LRACLLCSLVKTLEQFEYDGCDNCEEYLRLKNNRERVYDCTSSNFDGLIALMGPEDSWVA 72
Query: 75 RWLRIGRFVPGCYTLAVSEAL-PEDLQNL 102
+W RIGRFV GCY ++V+ L P +++L
Sbjct: 73 KWQRIGRFVKGCYAISVTGRLHPSTVRDL 101
>gi|390336126|ref|XP_796651.2| PREDICTED: transcription elongation factor SPT4-like
[Strongylocentrotus purpuratus]
Length = 147
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
+PT LRACL C L+KT DQF GC+NC F +M + + V DCT+P F+G+IS+M
Sbjct: 36 VPTGM-RGLRACLVCSLIKTADQFEVDGCDNCAEFLQMKNNRDMVFDCTSPTFDGLISLM 94
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
P SW A+W R+ R V GCY ++V+ LP+ ++ + V Y
Sbjct: 95 SPEDSWVAKWQRVNRCVKGCYAVSVTGELPKGMKQELKSRGVIY 138
>gi|221125661|ref|XP_002165435.1| PREDICTED: transcription elongation factor SPT4-like [Hydra
magnipapillata]
Length = 116
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 7 QIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISV 65
+P H LR+CL C +VKT +QF GC+NC + + DHE + CT+ NFNGIIS+
Sbjct: 5 SVPKELRH-LRSCLLCSMVKTLEQFERDGCDNCERYLHLKGDHENTLSCTSANFNGIISM 63
Query: 66 MDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDL 99
M P SW A+W RI + PGCY +V LP D+
Sbjct: 64 MTPEDSWVAKWQRIDKLRPGCYATSVYGKLPSDI 97
>gi|303390448|ref|XP_003073455.1| transcription elongation factor Spt4 [Encephalitozoon intestinalis
ATCC 50506]
gi|303302601|gb|ADM12095.1| transcription elongation factor Spt4 [Encephalitozoon intestinalis
ATCC 50506]
Length = 116
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Query: 7 QIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVM 66
+ + +LRACL C +KT + FR+ GCENCP +M + V +CTT NF G+++++
Sbjct: 4 KFKGTLSGKLRACLGCSQIKTLNGFRKDGCENCPMLEMKGNLSNVNECTTSNFRGVVALL 63
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPED-LQNLCEDERVQY 110
P+ SW +W RIG F G Y + V L ED ++++ +D R+ Y
Sbjct: 64 QPSNSWVGKWQRIGEFKKGLYAMVVEGVLSEDFVKDIEQDGRIYY 108
>gi|401406822|ref|XP_003882860.1| hypothetical protein NCLIV_026170 [Neospora caninum Liverpool]
gi|325117276|emb|CBZ52828.1| hypothetical protein NCLIV_026170 [Neospora caninum Liverpool]
Length = 145
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 57/86 (66%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAAR 75
LRAC+ CRL+ + QF + GC NC F +MD D RV DCTT NF G +++M PT SW AR
Sbjct: 50 LRACISCRLIMSEQQFYDEGCPNCGFLQMDGDRHRVWDCTTVNFAGFVAIMKPTSSWVAR 109
Query: 76 WLRIGRFVPGCYTLAVSEALPEDLQN 101
++ VPGCY ++V LPE +++
Sbjct: 110 HNKLTEVVPGCYAVSVVGELPESVKD 135
>gi|400596059|gb|EJP63843.1| transcription elongation factor SPT4 [Beauveria bassiana ARSEF
2860]
Length = 123
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 16 LRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRAC+ C +V TY +FR+ GC NC F + +++ CT+ F G+I++ DPT+SW A
Sbjct: 16 LRACMVCSVVMTYSRFRDEGCPNCDEFLHLAGSQDQIESCTSQVFEGLITLADPTKSWVA 75
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDE-RVQYVP 112
+W R+ +VPG Y + VS LP++++ EDE R+QY+P
Sbjct: 76 KWQRLDGYVPGVYAIKVSGQLPDEIRAALEDEYRIQYIP 114
>gi|70951910|ref|XP_745159.1| transcription factor [Plasmodium chabaudi chabaudi]
gi|56525394|emb|CAH77740.1| transcription factor, putative [Plasmodium chabaudi chabaudi]
Length = 126
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 60/88 (68%)
Query: 15 ELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
+LRACL CRL++T +F +SGC NC F +M D R+ DCTT NF+G I++ PT+SW A
Sbjct: 35 KLRACLSCRLLQTEAEFYQSGCSNCKFLQMTGDRHRIQDCTTENFSGFIAITTPTKSWIA 94
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNL 102
++ + +F PG Y L V LPE +++L
Sbjct: 95 QYNDLSKFNPGFYALQVVGELPESIRDL 122
>gi|358340221|dbj|GAA48164.1| transcription elongation factor SPT4 [Clonorchis sinensis]
Length = 117
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 68/104 (65%), Gaps = 2/104 (1%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
IP+ +LRACL C LVKT +QF+ +GCENC F KM D ++V +C++ NF+G++++M
Sbjct: 7 IPSEL-RQLRACLLCGLVKTLNQFQLNGCENCEDFLKMQGDRDKVYECSSANFDGLLAMM 65
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
PT SW ARW I + PG Y +V +LP+D+ + + + Y
Sbjct: 66 CPTESWVARWQMIDKLTPGVYAASVCGSLPDDIIHYLRSKGIPY 109
>gi|340379439|ref|XP_003388234.1| PREDICTED: transcription elongation factor SPT4-like [Amphimedon
queenslandica]
Length = 117
Score = 97.8 bits (242), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRAC C +VK++DQF +GC+NC + + + RV DCT+PNF+G+IS+M SW A
Sbjct: 13 LRACKLCSMVKSFDQFLYNGCDNCERYIHLKGNRGRVNDCTSPNFDGLISMMSNEDSWVA 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
+W RI +F GCY ++VS LPED+ + + V Y
Sbjct: 73 KWQRINKFTKGCYAVSVSGELPEDILDELRERGVVY 108
>gi|157113677|ref|XP_001652051.1| suppressor of ty [Aedes aegypti]
gi|108877633|gb|EAT41858.1| AAEL006566-PA [Aedes aegypti]
Length = 116
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C LVKT+DQF GCENC F +M + ++V DCT+ NF+G+I+VM P SW
Sbjct: 13 LRACLVCSLVKTFDQFEFDGCENCEEFLRMKNNKDQVYDCTSNNFDGLIAVMSPDDSWVC 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+W RI RF G Y ++VS LP + ++ + Y P
Sbjct: 73 KWQRINRFQKGVYAISVSGRLPNGIIRDMKNRGIPYRP 110
>gi|401827504|ref|XP_003887844.1| transcription elongation factor SPT4 [Encephalitozoon hellem ATCC
50504]
gi|392998851|gb|AFM98863.1| transcription elongation factor SPT4 [Encephalitozoon hellem ATCC
50504]
Length = 116
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 7 QIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVM 66
+ + +LRACL C +KT + FR+ GCENCP M + V +CT+ NF G+++++
Sbjct: 4 KFKATLSGKLRACLGCSQIKTQNGFRKDGCENCPMLAMKGNIANVNECTSSNFKGVVALL 63
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPED-LQNLCEDERVQY 110
P+ SW +W RIG F G Y + V LPED ++++ + RV Y
Sbjct: 64 QPSSSWVGKWQRIGEFKKGLYAMTVEGTLPEDFIKDVEQHGRVYY 108
>gi|242003564|ref|XP_002422775.1| transcription elongation factor SPT4, putative [Pediculus humanus
corporis]
gi|212505633|gb|EEB10037.1| transcription elongation factor SPT4, putative [Pediculus humanus
corporis]
Length = 116
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 15 ELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWA 73
LRACL C L+KT DQF GC+NC F +M + E + DCT+ NF+G+I++M P SW
Sbjct: 12 NLRACLVCSLIKTMDQFEYDGCDNCDEFLRMKNNRENIYDCTSSNFDGMIALMSPEDSWV 71
Query: 74 ARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
A+W RI RFV G Y ++V+ LP + ++ + Y P
Sbjct: 72 AKWQRINRFVKGVYAISVAGRLPPHIIRDMKNRGIIYRP 110
>gi|82540025|ref|XP_724359.1| transcription initiation protein Spt4 1-related [Plasmodium yoelii
yoelii 17XNL]
gi|23478976|gb|EAA15924.1| transcription initiation protein spt4 homolog 1-related [Plasmodium
yoelii yoelii]
Length = 131
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 60/88 (68%)
Query: 15 ELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
+LRACL CRL++T +F +SGC NC F +M D R+ DCTT NF+G I++ PT+SW A
Sbjct: 40 KLRACLSCRLLRTEAEFYQSGCTNCKFLQMTGDRHRIQDCTTENFSGFIAITTPTKSWIA 99
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNL 102
++ + ++ PG Y L V LPE +++L
Sbjct: 100 QYNDLSKYNPGFYALQVVGELPESIRDL 127
>gi|145342251|ref|XP_001416170.1| Transcription elongation factor SPT4 [Ostreococcus lucimarinus
CCE9901]
gi|144576395|gb|ABO94463.1| Transcription elongation factor SPT4 [Ostreococcus lucimarinus
CCE9901]
Length = 106
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 60/89 (67%)
Query: 6 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISV 65
A+ P +FG RACL C+LV+TY+QF ++GC NC M D +RV + TT N++G++S+
Sbjct: 14 AEAPLNFGKGSRACLYCKLVQTYEQFIDNGCGNCVTLNMKGDKDRVSELTTSNYSGMVSL 73
Query: 66 MDPTRSWAARWLRIGRFVPGCYTLAVSEA 94
+D SW +WLR+ VPGCY L++ +
Sbjct: 74 LDGRASWVGKWLRLDTCVPGCYALSLHSS 102
>gi|31212981|ref|XP_315434.1| AGAP005428-PA [Anopheles gambiae str. PEST]
gi|21299793|gb|EAA11938.1| AGAP005428-PA [Anopheles gambiae str. PEST]
Length = 116
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C ++K++DQF GC+NC F +M + E+V DCT+ NF+G+I+VM P SW
Sbjct: 13 LRACLVCSMIKSFDQFETDGCDNCEDFLRMKNNREQVYDCTSNNFDGMIAVMSPDDSWVC 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+W RI RF G Y ++VS LP + ++ + Y P
Sbjct: 73 KWQRISRFTKGIYAISVSGRLPNSIIREMKNRGIPYRP 110
>gi|167518548|ref|XP_001743614.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777576|gb|EDQ91192.1| predicted protein [Monosiga brevicollis MX1]
Length = 119
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Query: 9 PTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDP 68
P+S H LRACL C LVKT DQF E+GCENC + ++++++ + CTT F GI+SV+DP
Sbjct: 9 PSSNKH-LRACLSCGLVKTSDQFFETGCENCAYLDLNDNNDAIDSCTTARFYGIVSVIDP 67
Query: 69 TRSWAARWLRIGRFVPGCYTLAVSEALPED-LQNLCEDERVQY 110
+ SW A+W VPGCY L + LP D L + + R++Y
Sbjct: 68 SDSWVAKWQGNDACVPGCYALRLQGHLPSDKLDEMPPNLRLRY 110
>gi|260820940|ref|XP_002605792.1| hypothetical protein BRAFLDRAFT_114423 [Branchiostoma floridae]
gi|229291127|gb|EEN61802.1| hypothetical protein BRAFLDRAFT_114423 [Branchiostoma floridae]
Length = 117
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Query: 15 ELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWA 73
LRACL C L+KT DQF GC+NC P+ ++ + + V DCT+ NF+G++S+M P SW
Sbjct: 12 NLRACLLCSLIKTIDQFVFDGCDNCEPYLQLKGNKDLVYDCTSSNFDGVVSMMSPDDSWV 71
Query: 74 ARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
A+W RI RF PGCY ++ + LP + + + Y
Sbjct: 72 AKWQRINRFKPGCYAISTTGRLPPSIVRELKTHGITY 108
>gi|219117679|ref|XP_002179630.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408683|gb|EEC48616.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 133
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGII 63
A A +PT+ +RAC RC ++KT +QF + GCENCPF M +D ++V CTT + G
Sbjct: 21 ANASVPTNL-KAVRACKRCGILKTPEQFLDDGCENCPFLHMADDMQQVNKCTTAFYEGQA 79
Query: 64 SVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
+VMDP SWAA+W+R+ ++PG Y + V+ D++ E+ +++
Sbjct: 80 AVMDPRDSWAAKWIRVDAYLPGVYAITVTGNFDRDIEEDLENRGIRW 126
>gi|91088209|ref|XP_973275.1| PREDICTED: similar to suppressor of Ty 4 homolog 1 [Tribolium
castaneum]
gi|270012142|gb|EFA08590.1| hypothetical protein TcasGA2_TC006245 [Tribolium castaneum]
Length = 115
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 59/97 (60%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAAR 75
LRACL C L+K++DQF GC+NC F +M + + V DCT+ NF+G+I+ M P SW +
Sbjct: 13 LRACLVCSLIKSFDQFEYDGCDNCDFLRMKGNRDNVYDCTSSNFDGMIAAMSPDDSWVCK 72
Query: 76 WLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
W RI RF G Y ++VS LP + + + Y P
Sbjct: 73 WQRINRFCKGVYAISVSGRLPAGIIREMKSRGIVYRP 109
>gi|156081955|ref|XP_001608470.1| transcription factor [Plasmodium vivax Sal-1]
gi|148801041|gb|EDL42446.1| transcription factor, putative [Plasmodium vivax]
Length = 131
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 60/88 (68%)
Query: 15 ELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
++RACL CRL++T +F ++GC NC F +M D R+ DCTT NFNG +++ PT+SW A
Sbjct: 40 KMRACLSCRLLRTEAEFYQNGCSNCKFLQMAGDRHRIHDCTTENFNGFMAITTPTKSWMA 99
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNL 102
++ + ++ PG Y L V LPE +++L
Sbjct: 100 QYNDLSKYAPGFYALQVVGELPESIRDL 127
>gi|342875602|gb|EGU77343.1| hypothetical protein FOXB_12169 [Fusarium oxysporum Fo5176]
Length = 163
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 70/112 (62%), Gaps = 2/112 (1%)
Query: 3 SAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNG 61
S+ + T LRAC+ C +V TY +FR+ GC NC F + +++ CT+ F G
Sbjct: 42 SSSNYVSTGQARYLRACMVCSIVMTYARFRDEGCPNCEEFLHLQHSQDQIESCTSQVFEG 101
Query: 62 IISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDE-RVQYVP 112
+I++ +P +SW A++ R+ +VPG Y + VS LP+++++ EDE R+QY+P
Sbjct: 102 VITLANPAKSWIAKYQRLDNYVPGMYAIKVSGQLPDEIRSTLEDEYRIQYIP 153
>gi|170048885|ref|XP_001870822.1| transcription elongation factor SPT4 [Culex quinquefasciatus]
gi|167870821|gb|EDS34204.1| transcription elongation factor SPT4 [Culex quinquefasciatus]
Length = 116
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C +VKT+DQF GCENC F +M + ++V DCT+ NF+G+I+VM P SW
Sbjct: 13 LRACLVCSMVKTFDQFEYDGCENCEDFLRMKGNKDQVYDCTSNNFDGMIAVMSPDDSWVC 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+W RI RF G Y ++VS LP + ++ + Y P
Sbjct: 73 KWQRITRFTKGIYAISVSGRLPNGIIRDMKNRGIPYRP 110
>gi|237831935|ref|XP_002365265.1| transcription elongation factor SPT4, putative [Toxoplasma gondii
ME49]
gi|211962929|gb|EEA98124.1| transcription elongation factor SPT4, putative [Toxoplasma gondii
ME49]
gi|221486883|gb|EEE25129.1| transcription initiation protein, putative [Toxoplasma gondii GT1]
gi|221506574|gb|EEE32191.1| transcription initiation protein, putative [Toxoplasma gondii VEG]
Length = 146
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAAR 75
LRAC+ CRL+ + QF + GC NC F +MD D RV DCTT NF G ++VM P SW AR
Sbjct: 51 LRACISCRLIMSEQQFYDEGCPNCGFLQMDGDRHRVWDCTTVNFAGFVAVMKPMSSWVAR 110
Query: 76 WLRIGRFVPGCYTLAVSEALPEDLQN 101
++ VPGCY ++V LPE +++
Sbjct: 111 HNKLTEVVPGCYAVSVVGELPESVKD 136
>gi|221054141|ref|XP_002261818.1| transcription factor [Plasmodium knowlesi strain H]
gi|193808278|emb|CAQ38981.1| transcription factor, putative [Plasmodium knowlesi strain H]
Length = 131
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 60/88 (68%)
Query: 15 ELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
++RACL CRL++T +F ++GC NC F +M D R+ DCTT NFNG +++ PT+SW A
Sbjct: 40 KMRACLSCRLLRTEAEFYQNGCSNCKFLQMAGDRHRIHDCTTENFNGFMAITTPTKSWMA 99
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNL 102
++ + ++ PG Y L V LPE +++L
Sbjct: 100 QYNDLSKYAPGFYALQVVGELPESIRDL 127
>gi|340379469|ref|XP_003388249.1| PREDICTED: transcription elongation factor SPT4-like [Amphimedon
queenslandica]
Length = 107
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRAC C +VK++DQF +GC+NC + + + RV DCT+PNF+G+IS+M SW A
Sbjct: 13 LRACKLCSMVKSFDQFLYNGCDNCERYIHLKGNRGRVNDCTSPNFDGLISMMSNEDSWVA 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDL 99
+W RI +F GCY ++VS LPED+
Sbjct: 73 KWQRINKFTKGCYAVSVSGELPEDI 97
>gi|118344000|ref|NP_001071824.1| SPT4 protein [Ciona intestinalis]
gi|70571267|dbj|BAE06712.1| Ci-SPT4 [Ciona intestinalis]
Length = 122
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVM 66
+P S +RACL C L+KT DQF GC+NC + M + + V DCT+ +F+GIIS+M
Sbjct: 9 VPKSL-RNMRACLLCSLIKTMDQFEYDGCDNCDEYLHMRGNRDMVYDCTSSSFDGIISMM 67
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDL 99
P SW A+W RI +F PGCY ++V+ LP +
Sbjct: 68 APDESWVAKWQRIKKFSPGCYAISVTGRLPSSM 100
>gi|393246930|gb|EJD54438.1| transcription initiation protein spt4 [Auricularia delicata
TFB-10046 SS5]
Length = 120
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
+P++ LRACL C +++T +F+ GC NC +M +RV CT+ F GII+VM
Sbjct: 5 VPSTKTKGLRACLLCSVIQTVGEFKRKGCPNCENILQMQNSTDRVSTCTSKFFTGIIAVM 64
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQ 109
+P +SW ARW R +FVPG Y + V+ LPED+ EDE VQ
Sbjct: 65 NPDQSWVARWQRTAKFVPGMYAIQVNGRLPEDV----EDELVQ 103
>gi|346322909|gb|EGX92507.1| transcriptional elongation protein Spt4, putative [Cordyceps
militaris CM01]
Length = 123
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRAC+ C +V T+ +FR+ GC NC F + +++ CT+ F G+I++ DP +SW A
Sbjct: 16 LRACMVCSVVMTFSRFRDEGCPNCEEFLHLAGSQDQIESCTSQVFEGLITLADPAKSWVA 75
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDE-RVQYVP 112
+W R+ +VPG Y + VS LP+++++ EDE R+QY+P
Sbjct: 76 KWQRLDGYVPGVYAIKVSGQLPDEMRSALEDEYRIQYIP 114
>gi|389609939|dbj|BAM18581.1| suppressor of ty [Papilio xuthus]
Length = 116
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C L+KT++QF GC+NC F +M + + V DCT+ NF+G+I+VM P SW
Sbjct: 13 LRACLVCSLIKTFEQFEYYGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMSPEDSWVC 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+W RI RF PG Y ++VS LP + + + Y P
Sbjct: 73 KWQRISRFCPGVYAISVSGRLPAGVIREMKSRGIAYRP 110
>gi|195121895|ref|XP_002005448.1| GI20479 [Drosophila mojavensis]
gi|193910516|gb|EDW09383.1| GI20479 [Drosophila mojavensis]
Length = 116
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C LVKT+DQF GCENC F +M + + V D T+ NF+GII++ PT SW A
Sbjct: 13 LRACLVCSLVKTFDQFETDGCENCEEFLRMKNNKDNVYDHTSNNFDGIIALTTPTDSWVA 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
+W R+ RF G Y ++VS LP+ ++ + Y R
Sbjct: 73 KWQRLSRFTRGIYAISVSGTLPQSTIREMKNRGIAYKTRDR 113
>gi|302909010|ref|XP_003049978.1| transcription elongation factor SPT4 [Nectria haematococca mpVI
77-13-4]
gi|256730915|gb|EEU44265.1| transcription elongation factor SPT4 [Nectria haematococca mpVI
77-13-4]
Length = 123
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Query: 16 LRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRAC+ C +V TY++FR+ GC NC F + +++ CT+ F G+I++ +P RSW A
Sbjct: 15 LRACMVCSIVMTYNRFRDEGCPNCDEFLHLAGSQDQIESCTSQVFEGVITLANPARSWIA 74
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDE-RVQYVP 112
++ R+ +VPG Y + VS LP+D+++ EDE R+QY+P
Sbjct: 75 KYQRLDGYVPGMYAIKVSGQLPDDVRSTLEDEYRIQYIP 113
>gi|340514715|gb|EGR44975.1| transcription-elongation factor [Trichoderma reesei QM6a]
Length = 121
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRAC+ C +V TY +FR+ GC NC F + +++ CT+ F G+IS+ +P +SW A
Sbjct: 13 LRACMVCSIVMTYSRFRDEGCPNCEEFLHLIGSQDQIESCTSQVFEGLISLANPAKSWVA 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDE-RVQYVP 112
+W R+ +VPG Y + VS LP+++++ EDE R+QY+P
Sbjct: 73 KWQRLDGYVPGLYAIKVSGQLPDEIRSSLEDEYRIQYIP 111
>gi|357626150|gb|EHJ76345.1| hypothetical protein KGM_12908 [Danaus plexippus]
Length = 116
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C L+KT+DQF GC+NC F +M + + V DCT+ NF+G+I+VM P SW
Sbjct: 13 LRACLVCSLIKTFDQFEYDGCDNCDEFLRMKNNKDNVYDCTSNNFDGMIAVMSPVDSWVC 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+W RI RF G Y ++VS LP + + + Y P
Sbjct: 73 KWQRISRFCQGVYAISVSGRLPAGVIREMKSRGIAYRP 110
>gi|68075201|ref|XP_679517.1| transcription factor [Plasmodium berghei strain ANKA]
gi|56500282|emb|CAH98412.1| transcription factor, putative [Plasmodium berghei]
Length = 136
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 60/88 (68%)
Query: 15 ELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
+LRACL CRL++T +F ++GC NC F +M D R+ DCTT NF+G I++ PT+SW A
Sbjct: 45 KLRACLSCRLLRTEAEFYQNGCSNCKFLQMTGDRHRIQDCTTENFSGFIAITTPTKSWIA 104
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNL 102
++ + ++ PG Y L V LPE +++L
Sbjct: 105 QYNDLSKYNPGFYALQVVGELPESIRDL 132
>gi|307211608|gb|EFN87657.1| Transcription elongation factor SPT4 [Harpegnathos saltator]
Length = 116
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C L+KT+DQF GC+NC F +M + + V DCT+ NF+G+I+VM P SW
Sbjct: 13 LRACLVCSLIKTFDQFEFDGCDNCDEFLRMKNNKDNVFDCTSSNFDGMIAVMSPEDSWVC 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+W RI RF G Y ++VS LP + + + Y P
Sbjct: 73 KWQRINRFCKGVYAISVSGRLPAGVIRELKSRGIAYRP 110
>gi|332028343|gb|EGI68390.1| Transcription elongation factor SPT4 [Acromyrmex echinatior]
Length = 116
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C L+KT+DQF GC+NC F +M + + V DCT+ NF+G+I++M P SW +
Sbjct: 13 LRACLVCSLIKTFDQFEFDGCDNCDDFLRMKNNKDNVFDCTSSNFDGVIALMSPEDSWVS 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+W RI RF G Y ++VS LP + + + Y P
Sbjct: 73 KWQRINRFCKGVYAISVSGRLPAGVIREMKSRGIIYRP 110
>gi|322785847|gb|EFZ12466.1| hypothetical protein SINV_08881 [Solenopsis invicta]
Length = 136
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C LVKT+DQF GC+NC F +M + + V DCT+ NF+G+I+VM P SW
Sbjct: 11 LRACLVCSLVKTFDQFEFDGCDNCDDFLRMKNNKDNVFDCTSSNFDGMIAVMSPEDSWVC 70
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+W RI RF G Y ++VS LP + + + Y P
Sbjct: 71 KWQRINRFCKGVYAISVSGRLPAGVIREMKSRGIVYRP 108
>gi|358401253|gb|EHK50559.1| hypothetical protein TRIATDRAFT_53018 [Trichoderma atroviride IMI
206040]
Length = 121
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
+RAC+ C +V TY +FR+ GC NC F + +++ CT+ F G+I++ +P RSW A
Sbjct: 13 MRACMVCSIVMTYSRFRDEGCPNCEEFLHLIGSQDQIESCTSQVFEGLITLANPARSWVA 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDE-RVQYVP 112
+W R+ +VPG Y + VS LP+++++ EDE R+QY+P
Sbjct: 73 KWQRLDGYVPGVYAIKVSGQLPDEIRSSLEDEYRIQYIP 111
>gi|350538003|ref|NP_001232550.1| putative suppressor of Ty 4 [Taeniopygia guttata]
gi|197127518|gb|ACH44016.1| putative suppressor of Ty 4 [Taeniopygia guttata]
Length = 120
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVM 66
+P H LRACL C LVKT DQF GC+NC + +M + E V DCT+ +F+GII++M
Sbjct: 9 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCETYLQMKGNREMVYDCTSSSFDGIITMM 67
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
P SW ++W RI F PG Y ++V+ LP+ + + V Y
Sbjct: 68 SPEDSWVSKWQRISTFKPGVYAVSVTGRLPQGIVRELKSRGVAY 111
>gi|432899937|ref|XP_004076646.1| PREDICTED: transcription elongation factor SPT4-like [Oryzias
latipes]
Length = 117
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LVKT DQF GC+NC + +M + E V +CT+ +F+G+
Sbjct: 2 ALETVPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCEAYLQMKGNREMVYECTSSSFDGV 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
I++M P SW A+W RIG F PG Y ++V+ LP + + V Y
Sbjct: 61 IAMMSPEDSWVAKWQRIGNFKPGVYAVSVTGRLPPGVVRELKSRGVNY 108
>gi|358389837|gb|EHK27429.1| hypothetical protein TRIVIDRAFT_73317 [Trichoderma virens Gv29-8]
Length = 121
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRAC+ C +V TY +FR+ GC NC F + +++ CT+ F G+I++ +P +SW A
Sbjct: 13 LRACMVCSIVMTYSRFRDEGCPNCEEFLHLIGSQDQIESCTSQVFEGLITLANPAKSWVA 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDE-RVQYVP 112
+W R+ +VPG Y + VS LP+++++ EDE R+QY+P
Sbjct: 73 KWQRLDGYVPGVYAIKVSGQLPDEIRSSLEDEYRIQYIP 111
>gi|270346533|pdb|3H7H|A Chain A, Crystal Structure Of The Human Transcription Elongation
Factor Dsif, Hspt4HSPT5 (176-273)
Length = 120
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LVKT DQF GC+NC + +M + E V DCT+ +F+GI
Sbjct: 5 ALETVPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI 63
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
I++M P SW ++W R+ F PG Y ++V+ LP+ + + V Y
Sbjct: 64 IAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 111
>gi|441641402|ref|XP_004090373.1| PREDICTED: transcription elongation factor SPT4 isoform 2 [Nomascus
leucogenys]
Length = 134
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LVKT DQF GC+NC + +M + E V DCT+ +F+GI
Sbjct: 19 ALETVPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI 77
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
I++M P SW ++W R+ F PG Y ++V+ LP+ + + V Y
Sbjct: 78 IAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 125
>gi|354483320|ref|XP_003503842.1| PREDICTED: transcription elongation factor SPT4 1-like [Cricetulus
griseus]
gi|344240515|gb|EGV96618.1| Transcription elongation factor SPT4 [Cricetulus griseus]
Length = 117
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LVKT DQF GC+NC + +M + E V DCT+ +F+GI
Sbjct: 2 ALETVPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCEAYLQMKGNREMVYDCTSSSFDGI 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
I++M P SW ++W R+ F PG Y ++V+ LP+ + + V Y
Sbjct: 61 IAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108
>gi|19173491|ref|NP_597294.1| TRANSCRIPTION INITIATION PROTEIN [Encephalitozoon cuniculi GB-M1]
gi|19171080|emb|CAD26470.1| TRANSCRIPTION INITIATION PROTEIN [Encephalitozoon cuniculi GB-M1]
gi|449328907|gb|AGE95183.1| transcription initiation protein [Encephalitozoon cuniculi]
Length = 116
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Query: 7 QIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVM 66
+ + +LRACL C +KT + FR+ GCENCP M + V +CT+ F G+++++
Sbjct: 4 KFKGTLSGKLRACLGCSQIKTLNGFRKDGCENCPMLNMKGNVTNVSECTSSKFKGVVALL 63
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPED-LQNLCEDERVQY 110
P+ SW +W RIG F G Y + V AL ED +++L + R+ Y
Sbjct: 64 QPSNSWVGKWQRIGEFRKGLYAMVVEGALSEDFIKDLEQHGRIYY 108
>gi|410927121|ref|XP_003977013.1| PREDICTED: transcription elongation factor SPT4-like [Takifugu
rubripes]
Length = 117
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVM 66
+P H LRACL C LVKT DQF GC+NC + +M + E V +CT+ +F+G+I++M
Sbjct: 6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCESYLQMKGNREMVYECTSSSFDGVIAMM 64
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALP 96
P SW A+W RIG F PG Y ++V+ LP
Sbjct: 65 SPEESWVAKWQRIGNFKPGVYAVSVTGRLP 94
>gi|351706630|gb|EHB09549.1| Transcription elongation factor SPT4 [Heterocephalus glaber]
Length = 117
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LVKT DQF GC+NC + +M + E V DCT+ +F+GI
Sbjct: 2 ALETVPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDSYLQMKGNREMVYDCTSSSFDGI 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
I++M P SW ++W R+ F PG Y ++V+ LP+ + + V Y
Sbjct: 61 IAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108
>gi|301788061|ref|XP_002929444.1| PREDICTED: transcription elongation factor SPT4-like [Ailuropoda
melanoleuca]
Length = 117
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LVKT DQF GC+NC + +M + E V DCT+ +F+GI
Sbjct: 2 ALETVPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
I++M P SW ++W R+ F PG Y ++V+ LP+ + + V Y
Sbjct: 61 IAMMSPEDSWVSKWQRVSSFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108
>gi|207079853|ref|NP_001129015.1| transcription elongation factor SPT4 [Pongo abelii]
gi|75042647|sp|Q5RFH5.1|SPT4H_PONAB RecName: Full=Transcription elongation factor SPT4; AltName:
Full=DRB sensitivity-inducing factor small subunit;
Short=DSIF small subunit
gi|55725233|emb|CAH89482.1| hypothetical protein [Pongo abelii]
Length = 117
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LVKT DQF GC+NC + +M + E V DCT+ +F+GI
Sbjct: 2 ALETVPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
I++M P SW ++W R+ F PG Y ++V+ LP+ + + V Y
Sbjct: 61 IAMMSPGDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108
>gi|4507311|ref|NP_003159.1| transcription elongation factor SPT4 [Homo sapiens]
gi|6678181|ref|NP_033322.1| transcription elongation factor SPT4 1 [Mus musculus]
gi|77736564|ref|NP_001029964.1| transcription elongation factor SPT4 [Bos taurus]
gi|205361137|ref|NP_001099298.2| suppressor of Ty 4 homolog 1 [Rattus norvegicus]
gi|386781195|ref|NP_001247588.1| suppressor of Ty 4 homolog 1 [Macaca mulatta]
gi|73966584|ref|XP_853156.1| PREDICTED: transcription elongation factor SPT4 isoform 1 [Canis
lupus familiaris]
gi|114669545|ref|XP_523811.2| PREDICTED: transcription elongation factor SPT4 isoform 4 [Pan
troglodytes]
gi|114669547|ref|XP_001172685.1| PREDICTED: transcription elongation factor SPT4 isoform 2 [Pan
troglodytes]
gi|149723988|ref|XP_001503750.1| PREDICTED: transcription elongation factor SPT4-like [Equus
caballus]
gi|291405713|ref|XP_002719312.1| PREDICTED: suppressor of Ty 4 homolog 1 [Oryctolagus cuniculus]
gi|296238113|ref|XP_002764029.1| PREDICTED: transcription elongation factor SPT4-like [Callithrix
jacchus]
gi|311267707|ref|XP_003131694.1| PREDICTED: transcription elongation factor SPT4-like isoform 1 [Sus
scrofa]
gi|332246429|ref|XP_003272356.1| PREDICTED: transcription elongation factor SPT4 isoform 1 [Nomascus
leucogenys]
gi|344285793|ref|XP_003414644.1| PREDICTED: transcription elongation factor SPT4-like [Loxodonta
africana]
gi|348562117|ref|XP_003466857.1| PREDICTED: transcription elongation factor SPT4 1-like [Cavia
porcellus]
gi|395845831|ref|XP_003795623.1| PREDICTED: transcription elongation factor SPT4 [Otolemur
garnettii]
gi|397493063|ref|XP_003817433.1| PREDICTED: transcription elongation factor SPT4 isoform 1 [Pan
paniscus]
gi|397493065|ref|XP_003817434.1| PREDICTED: transcription elongation factor SPT4 isoform 2 [Pan
paniscus]
gi|403274810|ref|XP_003929154.1| PREDICTED: transcription elongation factor SPT4 [Saimiri
boliviensis boliviensis]
gi|426236995|ref|XP_004012447.1| PREDICTED: transcription elongation factor SPT4 [Ovis aries]
gi|426347366|ref|XP_004041324.1| PREDICTED: transcription elongation factor SPT4 isoform 1 [Gorilla
gorilla gorilla]
gi|426347368|ref|XP_004041325.1| PREDICTED: transcription elongation factor SPT4 isoform 2 [Gorilla
gorilla gorilla]
gi|54039623|sp|P63271.1|SPT41_MOUSE RecName: Full=Transcription elongation factor SPT4 1; AltName:
Full=DRB sensitivity-inducing factor small subunit 1;
Short=DSIF small subunit 1
gi|54039624|sp|P63272.1|SPT4H_HUMAN RecName: Full=Transcription elongation factor SPT4; Short=hSPT4;
AltName: Full=DRB sensitivity-inducing factor 14 kDa
subunit; Short=DSIF p14; AltName: Full=DRB
sensitivity-inducing factor small subunit; Short=DSIF
small subunit
gi|75077266|sp|Q4R941.1|SPT4H_MACFA RecName: Full=Transcription elongation factor SPT4; AltName:
Full=DRB sensitivity-inducing factor small subunit;
Short=DSIF small subunit
gi|110287970|sp|Q3SYX6.1|SPT4H_BOVIN RecName: Full=Transcription elongation factor SPT4; AltName:
Full=DRB sensitivity-inducing factor small subunit;
Short=DSIF small subunit
gi|1209779|gb|AAB07814.1| similar to Saccharomyces cerevisiae Spt4; protein has potential
N-terminal zinc-finger [Homo sapiens]
gi|1401053|gb|AAB18674.1| SUPT4H [Homo sapiens]
gi|1401055|gb|AAB18675.1| SUPT4H [Homo sapiens]
gi|1401066|gb|AAB18730.1| Supt4h [Mus musculus]
gi|3779194|gb|AAC71659.1| chromatin structural protein homolog [Mus musculus]
gi|12803911|gb|AAH02802.1| Suppressor of Ty 4 homolog 1 (S. cerevisiae) [Homo sapiens]
gi|19353442|gb|AAH24391.1| Suppressor of Ty 4 homolog 1 (S. cerevisiae) [Mus musculus]
gi|38511709|gb|AAH61174.1| Suppressor of Ty 4 homolog 1 (S. cerevisiae) [Mus musculus]
gi|47115263|emb|CAG28591.1| SUPT4H1 [Homo sapiens]
gi|56972238|gb|AAH87923.1| Suppressor of Ty 4 homolog 1 (S. cerevisiae) [Mus musculus]
gi|67967796|dbj|BAE00380.1| unnamed protein product [Macaca fascicularis]
gi|74268191|gb|AAI03341.1| Suppressor of Ty 4 homolog 1 (S. cerevisiae) [Bos taurus]
gi|95769216|gb|ABF57417.1| suppressor of Ty 4 homolog 1 [Bos taurus]
gi|119614870|gb|EAW94464.1| suppressor of Ty 4 homolog 1 (S. cerevisiae), isoform CRA_a [Homo
sapiens]
gi|119614872|gb|EAW94466.1| suppressor of Ty 4 homolog 1 (S. cerevisiae), isoform CRA_a [Homo
sapiens]
gi|148683883|gb|EDL15830.1| mCG7669, isoform CRA_c [Mus musculus]
gi|149053789|gb|EDM05606.1| rCG33054, isoform CRA_c [Rattus norvegicus]
gi|167773609|gb|ABZ92239.1| suppressor of Ty 4 homolog 1 (S. cerevisiae) [synthetic construct]
gi|187957092|gb|AAI41093.1| Suppressor of Ty 4 homolog 1 (S. cerevisiae) [Mus musculus]
gi|189065202|dbj|BAG34925.1| unnamed protein product [Homo sapiens]
gi|197246386|gb|AAI68730.1| Supt4h1 protein [Rattus norvegicus]
gi|261859092|dbj|BAI46068.1| suppressor of Ty 4 homolog 1 [synthetic construct]
gi|296477063|tpg|DAA19178.1| TPA: transcription elongation factor SPT4 [Bos taurus]
gi|355568571|gb|EHH24852.1| hypothetical protein EGK_08579 [Macaca mulatta]
gi|380815954|gb|AFE79851.1| transcription elongation factor SPT4 [Macaca mulatta]
gi|384942638|gb|AFI34924.1| transcription elongation factor SPT4 [Macaca mulatta]
gi|410256042|gb|JAA15988.1| suppressor of Ty 4 homolog 1 [Pan troglodytes]
gi|431890838|gb|ELK01717.1| Transcription elongation factor SPT4 [Pteropus alecto]
gi|432113640|gb|ELK35922.1| Transcription elongation factor SPT4 [Myotis davidii]
Length = 117
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LVKT DQF GC+NC + +M + E V DCT+ +F+GI
Sbjct: 2 ALETVPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
I++M P SW ++W R+ F PG Y ++V+ LP+ + + V Y
Sbjct: 61 IAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108
>gi|74204382|dbj|BAE39944.1| unnamed protein product [Mus musculus]
Length = 117
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LVKT DQF GC+NC + +M + E V DCT+ +F+GI
Sbjct: 2 ALETVPKDLLH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
I++M P SW ++W R+ F PG Y ++V+ LP+ + + V Y
Sbjct: 61 IAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108
>gi|402899779|ref|XP_003912865.1| PREDICTED: transcription elongation factor SPT4 [Papio anubis]
Length = 157
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVM 66
+P H LRACL C LVKT DQF GC+NC + +M + E V DCT+ +F+GII++M
Sbjct: 46 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMM 104
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
P SW ++W R+ F PG Y ++V+ LP+ + + V Y
Sbjct: 105 SPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 148
>gi|156544017|ref|XP_001608015.1| PREDICTED: transcription elongation factor SPT4-like [Nasonia
vitripennis]
Length = 114
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C L+KT+DQF GCENC F +M + + V DCT+ NF+G+I+ M P SW
Sbjct: 11 LRACLVCSLIKTFDQFEFDGCENCDEFLRMKNNKDNVFDCTSSNFDGMIAAMSPEDSWVC 70
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDL 99
+W RI RF G Y ++VS +P ++
Sbjct: 71 KWQRISRFTKGVYAISVSGRVPANI 95
>gi|47223757|emb|CAF98527.1| unnamed protein product [Tetraodon nigroviridis]
Length = 117
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LVKT DQF GC+NC + +M + E V +CT+ +F+G+
Sbjct: 2 ALETVPKDLRH-LRACLLCSLVKTIDQFDYDGCDNCESYLQMKGNREMVYECTSSSFDGV 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALP 96
I++M P SW A+W RIG F PG Y ++V+ LP
Sbjct: 61 IAMMSPEESWVAKWQRIGNFKPGVYAVSVTGRLP 94
>gi|348537377|ref|XP_003456171.1| PREDICTED: transcription elongation factor SPT4-like [Oreochromis
niloticus]
gi|229367174|gb|ACQ58567.1| Transcription elongation factor SPT4 [Anoplopoma fimbria]
Length = 117
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LVKT DQF GC+NC + +M + E V +CT+ +F+G+
Sbjct: 2 ALETVPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCESYLQMKGNREMVYECTSSSFDGV 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALP 96
I++M P SW A+W RIG F PG Y ++V+ LP
Sbjct: 61 IAMMSPEDSWVAKWQRIGNFKPGVYAVSVTGRLP 94
>gi|440902010|gb|ELR52859.1| Transcription elongation factor SPT4, partial [Bos grunniens mutus]
Length = 120
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LVKT DQF GC+NC + +M + E V DCT+ +F+GI
Sbjct: 5 ALETVPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI 63
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
I++M P SW ++W R+ F PG Y ++V+ LP+ + + V Y
Sbjct: 64 IAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 111
>gi|195485265|ref|XP_002091020.1| GE12484 [Drosophila yakuba]
gi|194177121|gb|EDW90732.1| GE12484 [Drosophila yakuba]
Length = 116
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 60/91 (65%), Gaps = 5/91 (5%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C LVK++DQF GCENC F +M + + V D T+ NF+GII++ PT SW A
Sbjct: 13 LRACLVCSLVKSFDQFETDGCENCEEFLRMKNNKDNVYDHTSNNFDGIIALTTPTDSWVA 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPE----DLQN 101
+W R+ RF G Y ++VS LP+ D++N
Sbjct: 73 KWQRLARFTRGIYAISVSGTLPQSTLRDMKN 103
>gi|387015684|gb|AFJ49961.1| Transcription elongation factor SPT4 [Crotalus adamanteus]
Length = 117
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LVKT DQF GC+NC + +M + E V DCT+ +F+GI
Sbjct: 2 ALETVPKDLRH-LRACLLCSLVKTIDQFEFDGCDNCDSYLQMKGNREMVYDCTSSSFDGI 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
I++M P SW ++W RI F PG Y ++V+ LP+ + + V Y
Sbjct: 61 IAMMSPEDSWVSKWQRISNFKPGVYAVSVTGRLPQGIVRELKSRGVVY 108
>gi|195333834|ref|XP_002033591.1| GM21413 [Drosophila sechellia]
gi|195582821|ref|XP_002081224.1| GD10908 [Drosophila simulans]
gi|194125561|gb|EDW47604.1| GM21413 [Drosophila sechellia]
gi|194193233|gb|EDX06809.1| GD10908 [Drosophila simulans]
Length = 116
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 60/91 (65%), Gaps = 5/91 (5%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C LVK++DQF GCENC F +M + + V D T+ NF+GII++ PT SW A
Sbjct: 13 LRACLVCSLVKSFDQFETDGCENCEEFLRMKNNKDNVYDHTSNNFDGIIALTTPTDSWVA 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPE----DLQN 101
+W R+ RF G Y ++VS LP+ D++N
Sbjct: 73 KWQRLSRFTRGIYAISVSGTLPQSTLRDMKN 103
>gi|19922116|ref|NP_610802.1| spt4 [Drosophila melanogaster]
gi|74866859|sp|Q9TVQ5.1|SPT4H_DROME RecName: Full=Transcription elongation factor SPT4; AltName:
Full=DRB sensitivity-inducing factor small subunit;
Short=DSIF small subunit; AltName: Full=dSpt4
gi|6492226|gb|AAF14223.1|AF108353_1 chromatin protein SPT4 [Drosophila melanogaster]
gi|6492228|gb|AAF14224.1| chromatin protein SPT4 [Drosophila melanogaster]
gi|10727597|gb|AAF58482.2| spt4 [Drosophila melanogaster]
gi|18447349|gb|AAL68240.1| LD44495p [Drosophila melanogaster]
gi|220951916|gb|ACL88501.1| spt4-PA [synthetic construct]
Length = 116
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 60/91 (65%), Gaps = 5/91 (5%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C LVK++DQF GCENC F +M + + V D T+ NF+GII++ PT SW A
Sbjct: 13 LRACLVCSLVKSFDQFETDGCENCEEFLRMKNNKDNVYDHTSNNFDGIIALTTPTDSWVA 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPE----DLQN 101
+W R+ RF G Y ++VS LP+ D++N
Sbjct: 73 KWQRLSRFTRGIYAISVSGTLPQSTLRDMKN 103
>gi|336274979|ref|XP_003352243.1| hypothetical protein SMAC_02678 [Sordaria macrospora k-hell]
gi|380092323|emb|CCC10099.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 120
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRAC+ C +V TY +FR+ GC NC F + +++ CT+ F GII++ +P RSW A
Sbjct: 14 LRACMVCSIVMTYARFRDEGCPNCEDFLHLQGSPDQIDSCTSQVFEGIITIANPQRSWVA 73
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+W R+ +V G Y VS LP+D++ ED+ +QY+P
Sbjct: 74 KWQRLDGYVKGVYATKVSGQLPDDVRTTLEDDGIQYIP 111
>gi|126307442|ref|XP_001363034.1| PREDICTED: transcription elongation factor SPT4-like [Monodelphis
domestica]
gi|395531852|ref|XP_003767987.1| PREDICTED: transcription elongation factor SPT4 [Sarcophilus
harrisii]
Length = 117
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LVKT DQF GC+NC + +M + E V DCT+ +F+GI
Sbjct: 2 ALETVPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDSYLQMKGNREMVYDCTSSSFDGI 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
I++M P SW ++W R+ F PG Y ++V+ LP+ + + V Y
Sbjct: 61 IAMMSPEDSWVSKWQRVSTFKPGVYAVSVTGRLPQGIVRELKSRGVVY 108
>gi|126321080|ref|XP_001368309.1| PREDICTED: transcription elongation factor SPT4-like [Monodelphis
domestica]
Length = 117
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LVKT DQF GC+NC + +M + E V DCT+ +F+GI
Sbjct: 2 ALETVPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDSYLQMKGNREMVYDCTSSSFDGI 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
I++M P SW ++W R+ F PG Y ++V+ LP+ + + V Y
Sbjct: 61 IAMMSPEDSWVSKWQRVSTFKPGVYAVSVTGRLPQGIVRELKSRGVVY 108
>gi|410980697|ref|XP_003996712.1| PREDICTED: transcription elongation factor SPT4 [Felis catus]
Length = 151
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVM 66
+P H LRACL C LVKT DQF GC+NC + +M + E V DCT+ +F+GII++M
Sbjct: 40 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMM 98
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
P SW ++W R+ F PG Y ++V+ LP+ + + V Y
Sbjct: 99 SPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 142
>gi|340711990|ref|XP_003394548.1| PREDICTED: transcription elongation factor SPT4-like isoform 1
[Bombus terrestris]
gi|340711992|ref|XP_003394549.1| PREDICTED: transcription elongation factor SPT4-like isoform 2
[Bombus terrestris]
Length = 114
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Query: 14 HELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSW 72
LRACL C L+KT+DQF GC+NC F +M + + V DCT+ NF+G+I+ M P SW
Sbjct: 9 RNLRACLVCSLIKTFDQFEFDGCDNCDEFLRMKNNKDNVFDCTSSNFDGMIAAMSPEDSW 68
Query: 73 AARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+W RI RF G Y ++VS LP + + + Y P
Sbjct: 69 VCKWQRINRFCKGVYAISVSGRLPAGVIREMKSRGIAYRP 108
>gi|383861308|ref|XP_003706128.1| PREDICTED: transcription elongation factor SPT4-like [Megachile
rotundata]
Length = 114
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C LVKT+DQF GC+NC F +M + + V DCT+ NF+G+I+ M P SW
Sbjct: 11 LRACLVCSLVKTFDQFEFDGCDNCDEFLRMKNNKDNVFDCTSSNFDGMIAAMSPEDSWVC 70
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+W RI RF G Y ++VS LP + + + Y P
Sbjct: 71 KWQRINRFCKGVYAISVSGRLPAGVIREMKSRGIAYRP 108
>gi|350402496|ref|XP_003486507.1| PREDICTED: transcription elongation factor SPT4-like [Bombus
impatiens]
Length = 114
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C L+KT+DQF GC+NC F +M + + V DCT+ NF+G+I+ M P SW
Sbjct: 11 LRACLVCSLIKTFDQFEFDGCDNCDEFLRMKNNKDNVFDCTSSNFDGMIAAMSPEDSWVC 70
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+W RI RF G Y ++VS LP + + + Y P
Sbjct: 71 KWQRINRFCKGVYAISVSGRLPAGVIREMKSRGIAYRP 108
>gi|396081968|gb|AFN83582.1| transcription elongation factor Spt4 [Encephalitozoon romaleae
SJ-2008]
Length = 116
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Query: 6 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISV 65
+ + +LRACL C +KT + FR+ GCENCP M + V +CT+ NF G++++
Sbjct: 3 GKFRGTLSGKLRACLGCSQIKTLNGFRKDGCENCPMLGMKGNIANVNECTSSNFKGVVAL 62
Query: 66 MDPTRSWAARWLRIGRFVPGCYTLAVSEALPED-LQNLCEDERVQY 110
+ P+ SW +W RIG F G Y + + L ED ++++ + RV Y
Sbjct: 63 LQPSNSWIGKWQRIGEFKKGLYAMVIEGVLSEDFIKDIEQHGRVYY 108
>gi|66513379|ref|XP_624457.1| PREDICTED: transcription elongation factor SPT4 isoform 2 [Apis
mellifera]
gi|380030199|ref|XP_003698741.1| PREDICTED: transcription elongation factor SPT4-like [Apis florea]
Length = 116
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C LVKT+DQF GC+NC F +M + + V DCT+ NF+G+I+ M P SW
Sbjct: 13 LRACLVCSLVKTFDQFEFDGCDNCDEFLRMKNNKDNVFDCTSSNFDGMIAAMSPEDSWVC 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+W RI RF G Y ++VS LP + + + Y P
Sbjct: 73 KWQRINRFCKGVYAISVSGRLPAGVIREMKSRGIVYRP 110
>gi|381214366|ref|NP_001244215.1| RING finger protein 43 [Gallus gallus]
Length = 117
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LVKT +QF GC+NC + +M + E V DCT+ +F+GI
Sbjct: 2 ALETVPKDLRH-LRACLLCSLVKTLEQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
I++M P SW ++W RI F PG Y ++V+ LP+ + + V Y
Sbjct: 61 IAMMSPEDSWVSKWQRISNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108
>gi|148232180|ref|NP_001089206.1| transcription elongation factor SPT4 [Xenopus laevis]
gi|82179143|sp|Q5HZ97.1|SPT4H_XENLA RecName: Full=Transcription elongation factor SPT4; AltName:
Full=DRB sensitivity-inducing factor small subunit;
Short=DSIF small subunit
gi|57920929|gb|AAH89123.1| MGC84906 protein [Xenopus laevis]
Length = 117
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LVKT DQF GC+NC + +M + E V DCT+ +F+GI
Sbjct: 2 ALETVPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
+++M P SW ++W RI F PG Y ++V+ LP+ + + V Y
Sbjct: 61 VAMMSPDDSWVSKWQRITNFKPGVYAVSVTGRLPQGIVRELKSRGVVY 108
>gi|62859879|ref|NP_001016679.1| suppressor of Ty 4 homolog 1 [Xenopus (Silurana) tropicalis]
Length = 117
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LVKT DQF GC+NC + +M + E V DCT+ +F+GI
Sbjct: 2 ALETVPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
+++M P SW ++W RI F PG Y ++V+ LP+ + + V Y
Sbjct: 61 VAMMSPDDSWVSKWQRITNFKPGVYAVSVTGRLPQGIVRELKSRGVLY 108
>gi|50540088|ref|NP_001002509.1| transcription elongation factor SPT4 [Danio rerio]
gi|82183088|sp|Q6DGQ0.1|SPT4H_DANRE RecName: Full=Transcription elongation factor SPT4; AltName:
Full=DRB sensitivity-inducing factor small subunit;
Short=DSIF small subunit
gi|49904576|gb|AAH76290.1| Zgc:92824 protein [Danio rerio]
Length = 117
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVM 66
+P H LRACL C LVKT DQF GC+NC + +M + E V +CT+ +F+G+I++M
Sbjct: 6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCESYLQMKGNREMVYECTSSSFDGVIAMM 64
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALP 96
P SW A+W RIG F PG Y + V+ LP
Sbjct: 65 SPEDSWVAKWQRIGNFKPGVYAVTVTGRLP 94
>gi|156386550|ref|XP_001633975.1| predicted protein [Nematostella vectensis]
gi|156221052|gb|EDO41912.1| predicted protein [Nematostella vectensis]
Length = 116
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A IP LRACL C L+KT +QF GCENC + ++ + E ++ CT+PNF+G+
Sbjct: 2 AMETIPKEL-RNLRACLLCSLIKTLEQFEYDGCENCEKYLRLKNNKENILSCTSPNFDGV 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
IS++ SW ARW RI V GCY ++V+ LP + + + Y R
Sbjct: 61 ISIISTEDSWVARWQRIESKVKGCYAVSVTGKLPSHIVRELKSRGITYTSRDR 113
>gi|389744292|gb|EIM85475.1| transcription initiation protein spt4 [Stereum hirsutum FP-91666
SS1]
Length = 122
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Query: 2 GSAPAQIPTSFGH-ELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNF 59
S A IPT H +LRACL C +++T FR GC NC +M +R+ CTT F
Sbjct: 3 ASGTAAIPTQARHKQLRACLLCSVIQTPSDFRRVGCPNCEEIMQMKGSPDRIQVCTTTYF 62
Query: 60 NGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+GIISV+DP SW ARW R ++V G Y + V +PED++ E ++Y P
Sbjct: 63 DGIISVIDPETSWVARWQRTSKYVRGMYAVRVKGRVPEDVEAELESRGIKYRP 115
>gi|196010607|ref|XP_002115168.1| hypothetical protein TRIADDRAFT_28457 [Trichoplax adhaerens]
gi|190582551|gb|EDV22624.1| hypothetical protein TRIADDRAFT_28457 [Trichoplax adhaerens]
Length = 119
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Query: 15 ELRACLRCRLVK--TYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRS 71
LRACL C LVK T DQF GCENC + + D + V +CT+PNF+G+IS+ DP S
Sbjct: 10 NLRACLVCSLVKASTIDQFELDGCENCDKYLHLKGDRQSVYECTSPNFSGMISLTDPKNS 69
Query: 72 WAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
W ARW I F GCY ++V+ LP+ + +D + Y
Sbjct: 70 WVARWQGIDSFTRGCYAISVTGRLPQHVLEELQDANITY 108
>gi|396478156|ref|XP_003840467.1| similar to transcription elongation factor spt4 [Leptosphaeria
maculans JN3]
gi|312217039|emb|CBX96988.1| similar to transcription elongation factor spt4 [Leptosphaeria
maculans JN3]
Length = 280
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNF 59
M + + IP S +RAC+ C +V+T+ QF + GC NC ++ + E++ DCT+ F
Sbjct: 156 MAAGNSYIPPSQQRHMRACMVCSIVRTHQQFLQQGCPNCEDILELIGNPEQINDCTSQVF 215
Query: 60 NGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
G+I+V D RSW AR+ R+ +VPG Y V LPED+ E+ + YVP
Sbjct: 216 EGLITVADTKRSWVARYQRLEGYVPGVYATQVEGILPEDVIGAVENAGINYVP 268
>gi|85098333|ref|XP_960597.1| hypothetical protein NCU03838 [Neurospora crassa OR74A]
gi|74616285|sp|Q7S743.1|SPT4_NEUCR RecName: Full=Transcription elongation factor spt-4; AltName:
Full=Chromatin elongation factor spt-4
gi|28922101|gb|EAA31361.1| hypothetical protein NCU03838 [Neurospora crassa OR74A]
gi|336472923|gb|EGO61083.1| hypothetical protein NEUTE1DRAFT_127799 [Neurospora tetrasperma
FGSC 2508]
gi|350293827|gb|EGZ74912.1| transcription elongation factor spt-4 [Neurospora tetrasperma FGSC
2509]
Length = 120
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRAC+ C +V TY +FR+ GC NC F + +++ CT+ F GII++ +P +SW A
Sbjct: 14 LRACMVCSIVMTYARFRDEGCPNCEDFLHLQGSPDQIDSCTSQVFEGIITIANPQKSWVA 73
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+W R+ +V G Y VS LP+D++ ED+ +QY+P
Sbjct: 74 KWQRLDGYVKGVYATKVSGQLPDDVRTTLEDDGIQYIP 111
>gi|195025841|ref|XP_001986127.1| GH21192 [Drosophila grimshawi]
gi|193902127|gb|EDW00994.1| GH21192 [Drosophila grimshawi]
Length = 116
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 5/91 (5%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C LVKT+DQF GCENC F +M + + V D T+ NF+G+I++ PT SW A
Sbjct: 13 LRACLVCSLVKTFDQFETDGCENCEEFLRMKNNKDNVYDHTSNNFDGMIALTTPTDSWVA 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPE----DLQN 101
+W R+ RF G Y ++VS LP D++N
Sbjct: 73 KWQRLARFTRGIYAISVSGNLPHSTLRDMKN 103
>gi|410516928|sp|Q4I5W5.2|SPT4_GIBZE RecName: Full=Transcription elongation factor SPT4; AltName:
Full=Chromatin elongation factor SPT4
gi|408392989|gb|EKJ72262.1| hypothetical protein FPSE_07556 [Fusarium pseudograminearum CS3096]
Length = 123
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 69/112 (61%), Gaps = 2/112 (1%)
Query: 3 SAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNG 61
S+ + T LRAC+ C +V T +F+ GC NC F + +++ CT+ F G
Sbjct: 2 SSSNYVTTGQARNLRACMICSIVMTSQRFQNEGCPNCEEFLHLQHSPDQIESCTSQVFEG 61
Query: 62 IISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDE-RVQYVP 112
+I++ +PT+SW A++ R+ +VPG Y + VS LP+D+++ EDE R+QY+P
Sbjct: 62 VITLANPTKSWIAKYQRLDSYVPGMYAIKVSGQLPDDVRSTLEDEYRIQYIP 113
>gi|308800240|ref|XP_003074901.1| Spt4 Transcription elongation factor SPT4 (IC) [Ostreococcus tauri]
gi|119358825|emb|CAL52169.2| Spt4 Transcription elongation factor SPT4 (IC) [Ostreococcus tauri]
Length = 115
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 9 PTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVM-D 67
PT RAC+ C+LVKT+DQF E GCENC + +D ERV +CTT +++G++S++ D
Sbjct: 17 PTHSDKRSRACIGCKLVKTFDQFIEDGCENCQHLALKDDRERVSECTTTSYSGVVSLLSD 76
Query: 68 PTRSWAARWLRIGRFVPGCYTLAVSEAL 95
SW +WL +G++ GCY L + +L
Sbjct: 77 ENASWVGKWLHLGKYACGCYALQLQGSL 104
>gi|383412081|gb|AFH29254.1| transcription elongation factor SPT4 [Macaca mulatta]
gi|410298192|gb|JAA27696.1| suppressor of Ty 4 homolog 1 [Pan troglodytes]
gi|410330275|gb|JAA34084.1| suppressor of Ty 4 homolog 1 [Pan troglodytes]
Length = 117
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LV T DQF GC+NC + +M + E V DCT+ +F+GI
Sbjct: 2 ALETVPKDLRH-LRACLLCSLVNTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
I++M P SW ++W R+ F PG Y ++V+ LP+ + + V Y
Sbjct: 61 IAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108
>gi|125807053|ref|XP_001360248.1| GA11588 [Drosophila pseudoobscura pseudoobscura]
gi|195149423|ref|XP_002015657.1| GL10908 [Drosophila persimilis]
gi|54635420|gb|EAL24823.1| GA11588 [Drosophila pseudoobscura pseudoobscura]
gi|194109504|gb|EDW31547.1| GL10908 [Drosophila persimilis]
Length = 116
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 5/91 (5%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C LVK++DQF GCENC F +M + + V D T+ NF+G+I++ PT SW A
Sbjct: 13 LRACLVCSLVKSFDQFETDGCENCEEFLRMKGNKDNVYDHTSNNFDGLIALTTPTDSWVA 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPE----DLQN 101
+W R+ RF G Y ++VS LP+ D++N
Sbjct: 73 KWQRLARFTRGIYAISVSGTLPQSTLRDMKN 103
>gi|34526369|dbj|BAC85230.1| unnamed protein product [Homo sapiens]
Length = 135
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LVKT DQF GC+NC + +M + E V DCT+ +F+GI
Sbjct: 2 ALETVPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPE 97
I++M P SW ++W R+ F PG Y ++V+ LP
Sbjct: 61 IAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPH 95
>gi|291227840|ref|XP_002733888.1| PREDICTED: suppressor of Ty 4 homolog 1-like [Saccoglossus
kowalevskii]
Length = 117
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 14 HELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSW 72
+RACL C L+KT++QF GC+NC + +M + + V DCT+ +F+GI+S+M P SW
Sbjct: 11 RNMRACLLCSLIKTFEQFEMDGCDNCDMYLQMKGNRDMVYDCTSSSFDGIVSLMSPEDSW 70
Query: 73 AARWLRIGRFVPGCYTLAVSEALPEDL 99
A+W RI R+ GCY ++V+ LP +
Sbjct: 71 VAKWQRINRYTKGCYAVSVTGRLPAGI 97
>gi|195384080|ref|XP_002050746.1| GJ22329 [Drosophila virilis]
gi|194145543|gb|EDW61939.1| GJ22329 [Drosophila virilis]
Length = 116
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 5/91 (5%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C LVKT+DQF GCENC F +M + + V D T+ NF+GII++ P SW A
Sbjct: 13 LRACLVCSLVKTFDQFETDGCENCEEFLRMKNNKDNVYDHTSNNFDGIIALTTPNDSWVA 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPE----DLQN 101
+W R+ RF G Y ++VS LP+ D++N
Sbjct: 73 KWQRLVRFTRGIYAISVSGTLPQSTLRDMKN 103
>gi|124802730|ref|XP_001347577.1| transcription factor, putative [Plasmodium falciparum 3D7]
gi|23495159|gb|AAN35490.1|AE014833_61 transcription factor, putative [Plasmodium falciparum 3D7]
Length = 133
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 59/88 (67%)
Query: 15 ELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
+LRACL CR++K+ +F ++GC NC F ++ D R+ DCTT NFNG +++ P +SW A
Sbjct: 42 KLRACLSCRMLKSESEFYQNGCINCKFLQLAGDRHRIHDCTTENFNGFMAITTPNKSWMA 101
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNL 102
++ + ++ PG Y L V LPE +++L
Sbjct: 102 QYNDLSKYAPGFYALQVIGELPESIRDL 129
>gi|358055806|dbj|GAA98151.1| hypothetical protein E5Q_04834 [Mixia osmundae IAM 14324]
Length = 110
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 58/98 (59%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMD 67
+P + RACL C L+ T F++SGC NCPF M D ERV+ CTT F G+++ +
Sbjct: 1 MPARGTGKQRACLSCSLILTASDFKKSGCPNCPFLAMKSDGERVLQCTTGTFEGVVASVK 60
Query: 68 PTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCED 105
P SW A++ RI F+PG Y L ++ L ++ Q E+
Sbjct: 61 PQESWVAKFSRIENFIPGAYALRMTGQLDQETQEALEE 98
>gi|380476979|emb|CCF44402.1| transcription elongation factor spt-4 [Colletotrichum higginsianum]
Length = 123
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 64/99 (64%), Gaps = 2/99 (2%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRAC+ C +V TY +FR+ GC NC F M +++ CT+ F G+I++ +P RSW A
Sbjct: 15 LRACMVCSIVMTYARFRDEGCPNCEEFLHMAGSQDQIESCTSQVFEGLITLANPKRSWVA 74
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDE-RVQYVP 112
+W R+ +V G Y + VS LP++++N E+E R+ Y+P
Sbjct: 75 KWQRLDGYVRGVYAIKVSGQLPDEIRNTLEEEYRIHYIP 113
>gi|116198229|ref|XP_001224926.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88178549|gb|EAQ86017.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 112
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 64/99 (64%), Gaps = 2/99 (2%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRAC+ C +V TY +FR+ GC NC F + +++ CT+ F G+I+V DPT+SW A
Sbjct: 14 LRACMVCSIVMTYARFRDEGCPNCEEFLHLQGSPDQIDSCTSQVFEGLITVADPTKSWVA 73
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDE-RVQYVP 112
+W R+ ++V G Y VS LP+D++ E+E R+ Y+P
Sbjct: 74 KWQRLDKYVRGVYATKVSGQLPDDVRTTLEEEYRITYIP 112
>gi|194756510|ref|XP_001960520.1| GF13399 [Drosophila ananassae]
gi|190621818|gb|EDV37342.1| GF13399 [Drosophila ananassae]
Length = 116
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C LVK++DQF GCENC F +M + + V D T+ NF+GII++ PT SW A
Sbjct: 13 LRACLVCSLVKSFDQFETDGCENCEEFLRMKNNKDNVYDHTSNNFDGIIALTTPTDSWVA 72
Query: 75 RWLRIGRFVPGCYTLAVSEALP 96
+W R+ RF G Y ++VS LP
Sbjct: 73 KWQRLARFNRGIYAISVSGTLP 94
>gi|325184703|emb|CCA19194.1| transcription elongation factor SPT4 putative [Albugo laibachii
Nc14]
Length = 91
Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Query: 6 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISV 65
A IP +F ELRACL C LVKT+ QF ++GCENC F +M ++ +RV +CTT +++G+I++
Sbjct: 16 ADIPNTF-RELRACLTCSLVKTFTQFYDTGCENCAFLQMADNRQRVAECTTAHYDGMIAL 74
Query: 66 MDPTRSWAARWLRIG 80
M P SW A+W R+G
Sbjct: 75 MRPKESWVAKWQRLG 89
>gi|195426361|ref|XP_002061303.1| GK20849 [Drosophila willistoni]
gi|194157388|gb|EDW72289.1| GK20849 [Drosophila willistoni]
Length = 116
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 5/91 (5%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C L+K++DQF GCENC F +M + + V D T+ NF+GII++ P+ SW A
Sbjct: 13 LRACLVCSLIKSFDQFETDGCENCEEFLRMKNNKDNVYDHTSNNFDGIIALTTPSDSWVA 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPE----DLQN 101
+W R+ RF G Y ++VS LP+ D++N
Sbjct: 73 KWQRLTRFTRGIYAISVSGTLPQSTLRDMKN 103
>gi|310792565|gb|EFQ28092.1| transcription elongation protein Spt4 [Glomerella graminicola
M1.001]
Length = 123
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 64/99 (64%), Gaps = 2/99 (2%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRAC+ C +V TY +FR+ GC NC F M +++ CT+ F G+I++ +P RSW A
Sbjct: 15 LRACMVCSIVMTYARFRDEGCPNCEEFLHMAGSQDQIESCTSQVFEGLITLANPKRSWVA 74
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDE-RVQYVP 112
+W R+ +V G Y + VS LP++++N E+E R+ Y+P
Sbjct: 75 KWQRLDGYVRGVYAIKVSGQLPDEIRNTLEEEYRIHYIP 113
>gi|333449405|gb|AEF33389.1| transcription elongation factor SPT4, partial [Crassostrea
ariakensis]
Length = 112
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
Query: 15 ELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWA 73
E++ C LVKT +QF GC+NC + ++ + ERV DCT+ NF+G+I++M P SW
Sbjct: 7 EIKGLSLCSLVKTLEQFEYDGCDNCEEYLRLKNNRERVYDCTSSNFDGLIALMGPEDSWV 66
Query: 74 ARWLRIGRFVPGCYTLAVSEAL-PEDLQNL 102
A+W RIGRFV GCY ++V+ L P +++L
Sbjct: 67 AKWQRIGRFVKGCYAISVTGRLHPSTVRDL 96
>gi|324521006|gb|ADY47762.1| Transcription elongation factor SPT4 [Ascaris suum]
Length = 190
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
Query: 15 ELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWA 73
LRACL C ++KT DQF + GC+NC F M D E+V +CT+ NF+G+I+V+ P SW
Sbjct: 83 NLRACLLCSMIKTLDQFEQDGCDNCERFLGMKGDEEKVSECTSSNFDGMIAVIIPEDSWV 142
Query: 74 ARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
+W +I R G Y ++VS LP + + + ++Y P R
Sbjct: 143 CKWQKISRKARGMYAISVSGTLPSHIVQELKAQNIRYKPNMR 184
>gi|7949148|ref|NP_035639.1| transcription elongation factor SPT4 2 [Mus musculus]
gi|22257063|sp|Q9Z199.1|SPT42_MOUSE RecName: Full=Transcription elongation factor SPT4 2; AltName:
Full=DRB sensitivity-inducing factor small subunit 2;
Short=DSIF small subunit 2
gi|3845625|gb|AAC71660.1| unknown [Mus musculus]
Length = 117
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LVKT DQF GC+NC + +M + E V DCT+ +F+GI
Sbjct: 2 ALETVPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
++M P SW ++W R+ F PG Y ++V+ LP+ + + V Y
Sbjct: 61 NAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108
>gi|194883580|ref|XP_001975879.1| GG20325 [Drosophila erecta]
gi|190659066|gb|EDV56279.1| GG20325 [Drosophila erecta]
Length = 116
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 5/91 (5%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C LVK++DQF GCENC F M + + V D T+ NF+GII++ PT SW A
Sbjct: 13 LRACLVCSLVKSFDQFETDGCENCEEFLCMKNNKDNVYDHTSNNFDGIIALTTPTDSWVA 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPE----DLQN 101
+W R+ RF G Y ++VS LP+ D++N
Sbjct: 73 KWQRLARFTRGIYAISVSGTLPQSTLRDMKN 103
>gi|322701464|gb|EFY93213.1| transcriptional elongation protein Spt4, putative [Metarhizium
acridum CQMa 102]
gi|322705752|gb|EFY97336.1| transcriptional elongation protein Spt4, putative [Metarhizium
anisopliae ARSEF 23]
Length = 121
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRAC+ C +V TY +FR+ GC NC F + +++ CT+ F G+I++ +P +SW A
Sbjct: 13 LRACMVCSIVMTYSRFRDEGCPNCEEFLHLAGSQDQIESCTSQVFEGLITLANPAKSWVA 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDE-RVQYVP 112
+W R+ +V G Y + VS LP+++++ E+E R+QY+P
Sbjct: 73 KWQRLDGYVAGVYAIKVSGQLPDEMRSTLEEEYRIQYIP 111
>gi|429864003|gb|ELA38393.1| transcriptional elongation protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 123
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 64/99 (64%), Gaps = 2/99 (2%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRAC+ C +V TY +FR+ GC NC F + +++ CT+ F G+IS+ DP RSW A
Sbjct: 15 LRACMVCSIVLTYSKFRDEGCPNCEEFLHLAGSQDQIESCTSQVFEGLISLKDPGRSWVA 74
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDE-RVQYVP 112
+W R+ +V G Y + VS LP++++ E+E R++Y+P
Sbjct: 75 KWQRLDNYVRGVYAIKVSGQLPDEIRTTLEEEYRIRYIP 113
>gi|321460428|gb|EFX71470.1| hypothetical protein DAPPUDRAFT_308814 [Daphnia pulex]
Length = 117
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 14 HELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSW 72
+RACL C LVKT++QF GC+NC F +M + + + DCT+ NF+G++++M P SW
Sbjct: 11 RNIRACLVCSLVKTFEQFEFDGCDNCDEFLRMKNNKDNIYDCTSNNFDGMVALMSPEDSW 70
Query: 73 AARWLRIGRFVPGCYTLAVSEALPE 97
A+W RI R V G Y ++VS LP+
Sbjct: 71 VAKWQRINRKVKGVYAISVSGRLPD 95
>gi|391344956|ref|XP_003746760.1| PREDICTED: transcription elongation factor SPT4-like [Metaseiulus
occidentalis]
Length = 116
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNF 59
M ++ IP F LRAC+ C LVK+ DQF + GCENC + +M + E+V CT+ F
Sbjct: 1 MAASMDNIPKDF-RNLRACMLCSLVKSVDQFEDMGCENCDKYLQMKGNREQVYHCTSTRF 59
Query: 60 NGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDL 99
+GII++M P SW A+W R+ +PG Y ++VS +P +
Sbjct: 60 DGIIALMQPEDSWVAKWQRLTHRLPGMYAISVSGRMPNGM 99
>gi|225713666|gb|ACO12679.1| Transcription elongation factor SPT4 1 [Lepeophtheirus salmonis]
Length = 117
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Query: 3 SAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNG 61
S + IP +LRACL C LVKT++QF GC+NC F + + E V DCT+ NF+G
Sbjct: 2 SDASIIPKDL-RQLRACLVCSLVKTFEQFENDGCDNCDRFLNLKHNRENVYDCTSSNFDG 60
Query: 62 IISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALP----EDLQNL 102
+I P SW +W RIGRF G Y ++VS LP +D+Q L
Sbjct: 61 MIGSRKPEDSWVCKWQRIGRFKRGVYAISVSGRLPPPVIKDMQAL 105
>gi|402081084|gb|EJT76229.1| transcription elongation factor spt-4 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 122
Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 64/99 (64%), Gaps = 2/99 (2%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRAC+ C +V T +FR+ GC NC F ++ E++ CT+ F G+I++ DP++SW A
Sbjct: 14 LRACMVCSIVMTLTRFRDEGCPNCEDFLRLQNSPEQIESCTSQVFEGLITLADPSKSWVA 73
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDER-VQYVP 112
+W R+ +V G Y + VS LP+D++ EDE +QY+P
Sbjct: 74 KWQRLDGYVKGVYAIKVSGQLPDDIRAAIEDETGMQYIP 112
>gi|443692641|gb|ELT94209.1| hypothetical protein CAPTEDRAFT_157886 [Capitella teleta]
Length = 117
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C LVKT DQF GCENC + + + + V +CT+ +F GI+S+M P SW A
Sbjct: 13 LRACLLCSLVKTIDQFEYEGCENCDEYLHLKGNRDAVYECTSSSFEGIVSLMSPDDSWVA 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
+W RI R V GCY ++V+ LP + + + V Y
Sbjct: 73 KWQRINRCVKGCYAVSVTGKLPPGIVRELKSKGVHY 108
>gi|226372924|gb|ACO52087.1| Transcription elongation factor SPT4 [Rana catesbeiana]
Length = 117
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LVKT DQF GC+NC + +M + E V DCT+ +F+GI
Sbjct: 2 ALETVPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
+++M SW ++W RI F PG Y ++V+ LP+ + + V Y
Sbjct: 61 VAMMSSDDSWVSKWQRITNFKPGVYAVSVTGRLPQGIVRELKSRGVVY 108
>gi|451994917|gb|EMD87386.1| hypothetical protein COCHEDRAFT_1144948 [Cochliobolus
heterostrophus C5]
Length = 124
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 3 SAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNG 61
+ A IP + +RAC+ C +V+T QF GC NC F ++ + E++ DCT+ F G
Sbjct: 2 AGGAYIPPNQQRNMRACMVCSIVRTQQQFLSQGCPNCEEFLELTGNPEQINDCTSQVFEG 61
Query: 62 IISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+I+V D T+SW AR+ R+ + PG Y V LP+D+ L E V YVP
Sbjct: 62 LITVADTTKSWVARYQRLEGYQPGVYATQVEGILPDDIIGLIESAGVNYVP 112
>gi|341891910|gb|EGT47845.1| hypothetical protein CAEBREN_00124 [Caenorhabditis brenneri]
Length = 120
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Query: 5 PAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGII 63
A +P LRACL C L+K+ D F++ GCENC + D E+V DCT+ N++G+I
Sbjct: 2 AASVPADL-RNLRACLLCSLIKSVDSFQKDGCENCEEVLHLKGDEEKVYDCTSANYDGMI 60
Query: 64 SVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
+ M SW +W ++ R V G Y ++VS +LP ++ + + ++Y P +R
Sbjct: 61 AAMSNDESWVCKWQKMQRKVKGMYAISVSGSLPSNVVSDLKSVGIRYKPNQR 112
>gi|427786237|gb|JAA58570.1| Putative transcription elongation factor spt4 [Rhipicephalus
pulchellus]
Length = 118
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNF 59
M ++ IP LRACL C ++KT++QF GC+NC + M + + V DCT+ NF
Sbjct: 1 MAASLESIPKDL-RNLRACLLCSMIKTFEQFEFDGCDNCDEYLHMKNNRDMVYDCTSSNF 59
Query: 60 NGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALP 96
+G+I++M+P SW A+W RI R G Y ++VS LP
Sbjct: 60 DGMIALMNPEDSWVAKWQRISRKAKGIYAISVSGRLP 96
>gi|290562173|gb|ADD38483.1| Transcription elongation factor SPT4 1 [Lepeophtheirus salmonis]
Length = 117
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Query: 3 SAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNG 61
S + IP +LRACL C LVKT++QF GC+NC F + + E V DCT+ NF+G
Sbjct: 2 SDASIIPKDL-RQLRACLVCSLVKTFEQFENDGCDNCDRFLNLKHNRENVYDCTSSNFDG 60
Query: 62 IISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALP----EDLQNL 102
+I P SW +W RIGRF G Y ++VS LP +D+Q L
Sbjct: 61 MIGSCKPEDSWVCKWQRIGRFKRGVYAISVSGRLPPPVIKDMQAL 105
>gi|169597995|ref|XP_001792421.1| hypothetical protein SNOG_01795 [Phaeosphaeria nodorum SN15]
gi|111070324|gb|EAT91444.1| hypothetical protein SNOG_01795 [Phaeosphaeria nodorum SN15]
Length = 332
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNF 59
M A IP + +RAC+ C +V+T QF GC NC ++ + E+V DCT+ F
Sbjct: 208 MAQQGAYIPPNQQRHMRACMICSIVRTQQQFTTQGCPNCEEILELAGNPEQVNDCTSQVF 267
Query: 60 NGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
G+ISV D RSW AR+ R+ +VPG Y V LPED+ E+ + YVP
Sbjct: 268 EGLISVADTNRSWVARYQRLEGYVPGVYATQVEGILPEDILMAVENAGINYVP 320
>gi|451846107|gb|EMD59418.1| hypothetical protein COCSADRAFT_41270 [Cochliobolus sativus ND90Pr]
Length = 124
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 3 SAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNG 61
+ A IP + +RAC+ C +V+T QF GC NC F ++ + E++ DCT+ F G
Sbjct: 2 AGGAYIPPNQQRNMRACMVCSIVRTQQQFLSQGCPNCEEFLELTGNPEQINDCTSQVFEG 61
Query: 62 IISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+I+V D T+SW AR+ R+ + PG Y V LP+D+ L E + YVP
Sbjct: 62 LITVADTTKSWVARYQRLEGYQPGVYATQVEGILPDDIIGLIESAGINYVP 112
>gi|320588738|gb|EFX01206.1| transcriptional elongation protein [Grosmannia clavigera kw1407]
Length = 121
Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 64/99 (64%), Gaps = 2/99 (2%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRAC+ C +V T+ +FRE GC NC F + E++ CT+ F G+I++ +P +SW A
Sbjct: 14 LRACMVCSIVMTFQRFREEGCPNCEEFLHLAGSPEQIDICTSQVFEGLITLANPNKSWVA 73
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDE-RVQYVP 112
RW R+ +V G Y + VS LP+D++ E+E R+QY+P
Sbjct: 74 RWQRLDGYVRGVYAIKVSGQLPDDVRTQLEEEHRIQYIP 112
>gi|308477370|ref|XP_003100899.1| CRE-SPT-4 protein [Caenorhabditis remanei]
gi|308264473|gb|EFP08426.1| CRE-SPT-4 protein [Caenorhabditis remanei]
Length = 120
Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Query: 5 PAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGII 63
A +P LRACL C L+K+ D F++ GCENC + D E+V DCT+ N++G+I
Sbjct: 2 SASVPADL-RNLRACLLCSLIKSVDAFQKDGCENCDGVLHLKGDEEKVYDCTSANYDGMI 60
Query: 64 SVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
+ M SW +W ++ R V G Y ++VS +LP ++ + + ++Y P +R
Sbjct: 61 AAMSNDDSWVCKWQKMQRKVKGMYAISVSGSLPSNVVSDLKSVGIRYKPNQR 112
>gi|339241097|ref|XP_003376474.1| transcription elongation factor SPT4 [Trichinella spiralis]
gi|316974808|gb|EFV58281.1| transcription elongation factor SPT4 [Trichinella spiralis]
Length = 199
Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 7 QIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISV 65
IP F LRACL C ++K+ DQF GC+NC F M D ++V DCT+ NF+G+I +
Sbjct: 8 NIPKDF-RNLRACLVCSMIKSIDQFESQGCDNCEQFLSMKHDRDKVYDCTSANFDGMIFL 66
Query: 66 MDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
DP SW RW I + G Y ++VS LP + + + Y P R
Sbjct: 67 TDPDDSWVGRWQMISKKKIGIYAISVSGTLPNAVVSEIRAMGMHYKPYMR 116
>gi|17554810|ref|NP_497135.1| Protein SPT-4 [Caenorhabditis elegans]
gi|75025048|sp|Q9TZ93.1|SPT4H_CAEEL RecName: Full=Transcription elongation factor SPT4; AltName:
Full=DRB sensitivity-inducing factor small subunit;
Short=DSIF small subunit
gi|351058600|emb|CCD66087.1| Protein SPT-4 [Caenorhabditis elegans]
Length = 120
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Query: 5 PAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGII 63
A +P LRACL C LVK+ + F++ GCENC + D E+V DCT+ N++G+I
Sbjct: 2 SASVPADL-RNLRACLLCSLVKSVESFQKEGCENCEDVLHLKGDEEKVYDCTSANYDGMI 60
Query: 64 SVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
+ M SW +W ++ R V G Y ++VS LP ++ + + V+Y P +R
Sbjct: 61 AAMSNNESWVCKWQKMQRKVKGMYAISVSGVLPNNIVSELKSLGVRYKPNQR 112
>gi|349805673|gb|AEQ18309.1| putative suppressor of ty 4 1 [Hymenochirus curtipes]
Length = 112
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMD 67
+P H LRACL C LVKT DQF GC+NC + + R+VDCT+ +F+GI+++M
Sbjct: 3 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAY-LQMKGNRMVDCTSSSFDGIVAMMS 60
Query: 68 PTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
P SW ++W RI F PG Y ++V+ LP+ + + V Y
Sbjct: 61 PDDSWVSKWQRITNFKPGVYAVSVTGRLPQGIVRELKSRGVLY 103
>gi|367025503|ref|XP_003662036.1| hypothetical protein MYCTH_2302098 [Myceliophthora thermophila ATCC
42464]
gi|347009304|gb|AEO56791.1| hypothetical protein MYCTH_2302098 [Myceliophthora thermophila ATCC
42464]
Length = 112
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 67/111 (60%), Gaps = 7/111 (6%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGI 62
APAQ LRAC+ C +V TY +FR+ GC NC F + +++ CT+ F G+
Sbjct: 7 APAQ-----QRYLRACMVCSIVMTYARFRDEGCPNCEEFLHLQGSPDQIESCTSQVFEGL 61
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDE-RVQYVP 112
IS+ DP +SW A+W R+ ++V G Y VS LP+D++ E+E R+ Y+P
Sbjct: 62 ISLADPGKSWVAKWQRLDKYVRGVYATKVSGQLPDDVRTTLEEEYRITYIP 112
>gi|159483651|ref|XP_001699874.1| transcription initiation factor [Chlamydomonas reinhardtii]
gi|158281816|gb|EDP07570.1| transcription initiation factor [Chlamydomonas reinhardtii]
Length = 122
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 65/99 (65%), Gaps = 12/99 (12%)
Query: 16 LRACLRCRLVKTYDQFRESGCENC-----PFFKMDEDHERVVDCTTPNFNGIISVMDPTR 70
L C CRL+K+ +QF + GC+NC P + D TTPNF+G+IS+MDP
Sbjct: 27 LVCCYVCRLIKSRNQFADQGCDNCRNIMGPSISFE-------DFTTPNFSGMISIMDPKS 79
Query: 71 SWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQ 109
SWA +WL +G++VPG Y +AV++ P++LQ++ E++ ++
Sbjct: 80 SWACKWLHLGKYVPGSYAMAVNDDPPDELQDILENKGIK 118
>gi|406861793|gb|EKD14846.1| transcriptional elongation protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 121
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
+P + LRAC+ C +V T ++F + GC NC F ++ + ++DCT+ F G+I++
Sbjct: 6 VPPNQQRNLRACMVCSIVMTQNRFLKEGCPNCEEFLHLEGSMDAIIDCTSQVFEGLITLA 65
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDE-RVQYVP 112
DP++SW A+W R+ +V G Y VS LP+++ + EDE R++Y+P
Sbjct: 66 DPSKSWVAKWQRLDGYVRGVYATKVSGQLPDEVVAVMEDEARIKYIP 112
>gi|193613262|ref|XP_001952282.1| PREDICTED: transcription elongation factor SPT4-like [Acyrthosiphon
pisum]
Length = 116
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 17 RACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAAR 75
RACL C L+K++DQF GC+NC F ++ + + V DCT+ NF+G++++M P SW AR
Sbjct: 14 RACLVCSLIKSFDQFEIDGCDNCDEFLRLKNNRDHVYDCTSSNFDGMVALMSPEDSWVAR 73
Query: 76 WLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
W +I RF G Y ++V+ LP + + + Y P
Sbjct: 74 WQKINRFTKGIYAISVAGRLPPNFVREMKARGIPYRP 110
>gi|241680460|ref|XP_002400900.1| transcription elongation factor SPT4, putative [Ixodes
scapularis]
gi|215504294|gb|EEC13788.1| transcription elongation factor SPT4, putative [Ixodes
scapularis]
Length = 118
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNF 59
M ++ IP LRACL C ++KT++QF GC+NC + M + + V DCT+ NF
Sbjct: 1 MTASLESIPKDL-RNLRACLLCSMIKTFEQFEFDGCDNCDEYLHMKNNRDMVYDCTSSNF 59
Query: 60 NGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALP 96
+G+I++M+P SW A+W RI R G Y ++VS LP
Sbjct: 60 DGMIALMNPEDSWVAKWQRINRKAKGIYAISVSGRLP 96
>gi|345565719|gb|EGX48667.1| hypothetical protein AOL_s00079g306 [Arthrobotrys oligospora ATCC
24927]
Length = 127
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVM 66
+PT+ LRAC+ C +V T D+F GC NC P + CT+P + G IS+
Sbjct: 13 VPTNHFRYLRACMVCAVVLTLDEFTRKGCPNCHPVLDYTTGSDLAQMCTSPIYEGCISID 72
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
PT SW A+WLR+ ++VPG Y V LPED + E ++Y+P
Sbjct: 73 KPTESWIAKWLRLDKYVPGVYATKVVGDLPEDAMDYLNAENIEYIP 118
>gi|154311505|ref|XP_001555082.1| hypothetical protein BC1G_06605 [Botryotinia fuckeliana B05.10]
gi|347829219|emb|CCD44916.1| similar to transcription elongation factor spt4 [Botryotinia
fuckeliana]
Length = 121
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 2/107 (1%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
+P + LRAC+ C +V T ++F GC NC F + E ++DCT+ F G+I++
Sbjct: 6 VPPNQQRNLRACMVCSIVMTQNRFMREGCPNCEDFLHLQGSMEAIIDCTSQVFEGLITLA 65
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDE-RVQYVP 112
DP++SW A+W R+ +V G Y V+ LPE++ + E+E RV+Y+P
Sbjct: 66 DPSKSWVAKWQRLDGYVRGVYATKVNGQLPEEIVSTMEEEARVKYIP 112
>gi|403416880|emb|CCM03580.1| predicted protein [Fibroporia radiculosa]
Length = 121
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
Query: 1 MGSAPAQIPTS-FGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPN 58
M A A IP +LRACL C +++T FR+ GC NC +M +R+ CTT +
Sbjct: 1 MSGAQAAIPPQPRAKQLRACLLCSIIQTPADFRKHGCPNCEELMQMKGYTDRIQACTTTH 60
Query: 59 FNGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
F+G+I V+DP +SW ARW R ++V G Y + V +P+D++ E ++Y P
Sbjct: 61 FDGVIGVIDPEQSWVARWQRTSKYVRGMYAVRVKGRIPDDVEAELESRGIKYRP 114
>gi|442747457|gb|JAA65888.1| Putative transcription elongation factor spt4 [Ixodes ricinus]
Length = 118
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNF 59
M ++ IP LRACL C ++KT++QF GC+NC + M + + V DCT+ NF
Sbjct: 1 MTASLESIPKDL-RNLRACLLCSMIKTFEQFEFDGCDNCDEYLHMKNNRDMVYDCTSSNF 59
Query: 60 NGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALP 96
+G+I++M+P SW A+W RI R G Y ++VS LP
Sbjct: 60 DGMIALMNPEDSWVAKWQRITRKAKGIYAISVSGRLP 96
>gi|225718054|gb|ACO14873.1| Transcription elongation factor SPT4 1 [Caligus clemensi]
Length = 117
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 6/105 (5%)
Query: 3 SAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNG 61
S + IP +LRACL C L+KT+DQF GC+NC F + + E V DCT+ NF+G
Sbjct: 2 SDASVIPKDL-RQLRACLVCSLIKTFDQFESDGCDNCDRFLNLKHNRENVYDCTSSNFDG 60
Query: 62 IISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALP----EDLQNL 102
+I P SW +W RI RF G Y ++VS LP +D+Q +
Sbjct: 61 MIGSCKPDDSWVCKWQRINRFKRGIYAISVSGRLPPPVIKDMQAM 105
>gi|390600752|gb|EIN10146.1| transcription initiation protein spt4 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 117
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Query: 6 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIIS 64
A IP + LRACL C L++T FR++GC NC +M +R+ CTT F+G+I+
Sbjct: 3 AAIPPAKAKSLRACLLCSLIQTPVDFRKNGCPNCEELMQMRGSPDRISVCTTTYFDGVIA 62
Query: 65 VMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
V+DP SW A+W R ++V G Y + V +PED++ E ++Y P
Sbjct: 63 VIDPETSWVAKWQRTSKYVRGMYAVRVKGRVPEDVEAELEARGIRYRP 110
>gi|268571021|ref|XP_002640905.1| C. briggsae CBR-SPT-4 protein [Caenorhabditis briggsae]
gi|74788615|sp|Q628A6.1|SPT4H_CAEBR RecName: Full=Transcription elongation factor SPT4; AltName:
Full=DRB sensitivity-inducing factor small subunit;
Short=DSIF small subunit
Length = 120
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Query: 5 PAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGII 63
A IP+ LRACL C L+K+ D F+ GCENC + D E+V DCT+ N++G+I
Sbjct: 2 AASIPSDL-RNLRACLLCSLIKSVDAFQTDGCENCDEVLHLKGDEEKVYDCTSANYDGMI 60
Query: 64 SVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
+ M SW +W ++ R V G Y ++VS +LP ++ + + V+Y +R
Sbjct: 61 AAMSNDDSWVCKWQKMQRRVKGIYAISVSGSLPSNVVSDLKSMGVRYKANQR 112
>gi|387915734|gb|AFK11476.1| transcription elongation factor SPT4 [Callorhinchus milii]
Length = 118
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 14 HELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSW 72
LR CL C LVKT DQF GC+NC + +M + E V DCT+ +F+GII++M P SW
Sbjct: 12 RNLRVCLLCSLVKTIDQFDYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMMSPDDSW 71
Query: 73 AARWLRIGRFVPGCYTLAVSEALPEDL 99
++W R F PG Y ++V+ LP+ +
Sbjct: 72 VSKWQRTSNFKPGIYAVSVTGRLPQGI 98
>gi|389582773|dbj|GAB65510.1| transcription factor [Plasmodium cynomolgi strain B]
Length = 143
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 61/100 (61%), Gaps = 12/100 (12%)
Query: 15 ELRACLRCRLVKT-----------YDQ-FRESGCENCPFFKMDEDHERVVDCTTPNFNGI 62
+LRACL CRL++T DQ F ++GC NC F +M D R+ DCTT NFNG
Sbjct: 40 KLRACLSCRLLRTEAEVSTGAANRRDQAFYQNGCSNCKFLQMAGDRHRIHDCTTENFNGF 99
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNL 102
+++ PT+SW A++ + ++ PG Y L V LPE +++L
Sbjct: 100 MAITTPTKSWMAQYNDLSKYAPGFYALQVVGELPESIRDL 139
>gi|126322720|ref|XP_001381619.1| PREDICTED: transcription elongation factor SPT4-like [Monodelphis
domestica]
Length = 117
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LVKT QF GC+NC + +M + V DCT+P+F+GI
Sbjct: 2 ALETVPKDLRH-LRACLLCSLVKTIGQFEYDGCDNCDSYLQMKGNRGMVYDCTSPSFDGI 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDL 99
I++M P SW ++W + F PG Y ++V+ LP+ +
Sbjct: 61 IAMMSPGDSWVSKWQGLSTFKPGVYAISVTGCLPQGI 97
>gi|328851577|gb|EGG00730.1| hypothetical protein MELLADRAFT_39532 [Melampsora larici-populina
98AG31]
Length = 107
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 64/106 (60%), Gaps = 4/106 (3%)
Query: 11 SFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPT 69
S +LRAC+ C V+T QF+ GC NC +M + E+V++CT F+G +++DP
Sbjct: 2 SSKSKLRACMLCSFVQTAQQFKNKGCPNCDDLLQMKGNSEKVLECTAGTFDGTAAILDPD 61
Query: 70 RSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
+SW A+W RI R+ PG Y + ++ +LPE + N D + V P+R
Sbjct: 62 QSWVAKWQRINRYEPGVYAIRITGSLPEHILN---DLEHRGVTPRR 104
>gi|449016798|dbj|BAM80200.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 118
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 5 PAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP--FFKMDEDHERVVDCTTPNFNGI 62
P+++ +S +LRACL C LVK+ QF GCENCP F D ERV+ TT F+G+
Sbjct: 12 PSEVQSS---KLRACLSCGLVKSVAQFLAYGCENCPGLFEAGTGDRERVLTFTTAEFSGL 68
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDL 99
+++ P SW A+W R+ R VPGCY + + LP+D+
Sbjct: 69 VALYRPKVSWVAKWQRLSRKVPGCYAIGILAELPDDV 105
>gi|189195228|ref|XP_001933952.1| transcription elongation factor spt4 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979831|gb|EDU46457.1| transcription elongation factor spt4 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 279
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Query: 6 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIIS 64
A IP + +RAC+ C +V+T QF GC NC ++ + E++ DCT+ F+G+IS
Sbjct: 160 AYIPPNQQRNMRACMVCSVVRTQQQFLTEGCPNCEDVLELAGNPEQINDCTSQVFDGLIS 219
Query: 65 VMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
V D +RSW AR+ R+ + PG Y V LPED+ L E + YVP
Sbjct: 220 VSDTSRSWVARYQRLEGYRPGVYATQVEGILPEDVIGLVESAGINYVP 267
>gi|209731282|gb|ACI66510.1| Transcription elongation factor SPT4 [Salmo salar]
Length = 117
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 9 PTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMD 67
P H LRACL C LVKT DQF GC+NC + +M + E V +CT+ +F+G+I+ M
Sbjct: 7 PKDLRH-LRACLLCSLVKTIDQFEYDGCDNCESYLQMKGNREMVYECTSSSFDGVIAQMS 65
Query: 68 PTRSWAARWLRIGRFVPGCYTLAVSEALP 96
P SW A+W RI F PG Y + V+ LP
Sbjct: 66 PEDSWVAKWQRISNFKPGVYAVTVTGRLP 94
>gi|452846356|gb|EME48289.1| hypothetical protein DOTSEDRAFT_60608 [Dothistroma septosporum
NZE10]
Length = 115
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C V+T +F +SGC NC PF +M + V DCT+ F G+I+V D T SW A
Sbjct: 8 LRACLVCSFVQTQSKFVKSGCPNCEPFLEMRGSTDVVGDCTSETFEGLITVNDTTTSWVA 67
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
RW R+ +VPG Y + V+ L E+ E+ V Y P
Sbjct: 68 RWQRVVGYVPGIYAVQVTGDLGEEYITAAENYGVTYQP 105
>gi|317574759|ref|NP_001187801.1| transcription elongation factor spt4 [Ictalurus punctatus]
gi|308324005|gb|ADO29138.1| transcription elongation factor spt4 [Ictalurus punctatus]
Length = 117
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCPF-FKMDEDHERVVDCTTPNFNGIISVM 66
+P H LRACL C LVKT DQF GC+NC +M + E V +CT+ +F+G+I++M
Sbjct: 6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCESCLQMKGNREMVYECTSSSFDGVIAMM 64
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALP 96
P SW A+W RIG F G Y + V+ LP
Sbjct: 65 SPEDSWVAKWQRIGNFKAGVYAVTVTGRLP 94
>gi|402594662|gb|EJW88588.1| transcription elongation factor SPT4 [Wuchereria bancrofti]
Length = 119
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C ++K+ +QF GC+NC + M D E+V +CT+ NF+G+I+ P SW
Sbjct: 13 LRACLLCSMIKSVEQFELDGCDNCERYLGMKGDEEKVSECTSSNFDGMIAATVPEESWVC 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
+W +I R V G Y ++VS LP + + + ++Y P R
Sbjct: 73 KWQKINRKVKGIYAVSVSGTLPSHIVQELKAQNIRYKPSMR 113
>gi|225715734|gb|ACO13713.1| Transcription elongation factor SPT4 [Esox lucius]
Length = 117
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 9 PTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMD 67
P H LRACL C LVKT DQF GC+NC + +M + E V +CT+ +F+G+I++M
Sbjct: 7 PKDLRH-LRACLLCSLVKTIDQFEYDGCDNCESYLQMRGNREMVYECTSSSFDGVIAMMS 65
Query: 68 PTRSWAARWLRIGRFVPGCYTLAVSEALP 96
P SW A+W RI F PG Y + V+ LP
Sbjct: 66 PEDSWVAKWRRISNFRPGVYAVTVTGRLP 94
>gi|367038441|ref|XP_003649601.1| hypothetical protein THITE_2108277 [Thielavia terrestris NRRL 8126]
gi|346996862|gb|AEO63265.1| hypothetical protein THITE_2108277 [Thielavia terrestris NRRL 8126]
Length = 121
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRAC+ C +V TY +FR+ GC NC F + +++ CT+ F G+I+++DP +SW A
Sbjct: 14 LRACMVCSIVMTYARFRDEGCPNCEEFLHLQGSPDQIDSCTSQVFEGLITLVDPAKSWVA 73
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDE-RVQYVP 112
+W R+ +V G Y VS LP+D++ E+E R+ Y+P
Sbjct: 74 KWQRLDGYVRGVYATKVSGQLPDDVRTTLEEEYRITYIP 112
>gi|213513934|ref|NP_001135343.1| Transcription elongation factor SPT4 [Salmo salar]
gi|209734712|gb|ACI68225.1| Transcription elongation factor SPT4 [Salmo salar]
Length = 117
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 9 PTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMD 67
P H LRACL C LVKT DQF GC+NC + +M + E V +CT+ +F+G+I+ M
Sbjct: 7 PKDLRH-LRACLLCSLVKTIDQFEYDGCDNCESYLQMKGNREMVYECTSSSFDGVIAQMG 65
Query: 68 PTRSWAARWLRIGRFVPGCYTLAVSEALP 96
P SW A+W RI F PG Y + V+ LP
Sbjct: 66 PEDSWVAKWQRISNFKPGVYAVTVTGRLP 94
>gi|389624059|ref|XP_003709683.1| transcription elongation factor spt-4 [Magnaporthe oryzae 70-15]
gi|351649212|gb|EHA57071.1| transcription elongation factor spt-4 [Magnaporthe oryzae 70-15]
gi|440466605|gb|ELQ35864.1| transcription elongation factor spt-4 [Magnaporthe oryzae Y34]
gi|440482588|gb|ELQ63063.1| transcription elongation factor spt-4 [Magnaporthe oryzae P131]
Length = 122
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Query: 15 ELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWA 73
LRAC+ C +V +F + GC NC F + +++ CT+ F G+IS+ DPT+SW
Sbjct: 13 HLRACMVCSIVVHQKRFYDEGCPNCEDFLHLQGSTDQIESCTSQVFEGLISLADPTKSWV 72
Query: 74 ARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDE-RVQYVP 112
A+W R+ +V G Y + VS LP+D++ EDE R+QY+P
Sbjct: 73 AKWQRLDGYVRGVYAIKVSGQLPDDVRATIEDEYRIQYIP 112
>gi|255956063|ref|XP_002568784.1| Pc21g17890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590495|emb|CAP96686.1| Pc21g17890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 120
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRAC+ C +V+ +++F GC NC ++ +++ + +CT+ F G+I+V DP SW A
Sbjct: 13 LRACMVCSVVQIHNKFMREGCPNCESTLQLRGNNDAIQECTSQVFEGLIAVRDPAASWVA 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
RW R+ +VPG Y V+ LPE + N ED ++YVP
Sbjct: 73 RWQRLDNYVPGTYATKVTGTLPEYIINSLEDSGIKYVP 110
>gi|317036912|ref|XP_001398319.2| transcription elongation factor spt4 [Aspergillus niger CBS 513.88]
gi|358373211|dbj|GAA89810.1| transcriptional elongation protein Spt4 [Aspergillus kawachii IFO
4308]
Length = 120
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 68/110 (61%), Gaps = 6/110 (5%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGI 62
AP+Q T LRAC+ C LV+ + +F GC NC + +++ + +CT+ F G+
Sbjct: 6 APSQQRT-----LRACMVCSLVQLHSKFMREGCPNCDNVLGLRGNNDAIQECTSQVFEGL 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+++ DPT SW ARW R+ +VPG Y + V+ +LP+++ + ED V+Y+P
Sbjct: 61 VTLRDPTTSWVARWQRLDSYVPGTYAVKVTGSLPDEIISSLEDSGVKYIP 110
>gi|340905081|gb|EGS17449.1| hypothetical protein CTHT_0067760 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 121
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRAC+ C +V TY +FR+ GC NC F + +++ CT+ F G+I++ DP +SW A
Sbjct: 14 LRACMVCSIVMTYARFRDEGCPNCEEFLHLQGSPDQIDSCTSQVFEGLIALSDPKKSWVA 73
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDE-RVQYVP 112
+W R+ +V G Y VS LP+D++ EDE R+ Y+P
Sbjct: 74 KWQRLDGYVRGVYATKVSGQLPDDVRAQLEDEYRITYIP 112
>gi|312074143|ref|XP_003139838.1| transcription elongation factor SPT4 [Loa loa]
gi|307764997|gb|EFO24231.1| transcription elongation factor SPT4 [Loa loa]
Length = 119
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C ++K+ +QF GC+NC + M D E+V +CT+ NF+G+I+ P SW
Sbjct: 13 LRACLLCSMIKSVEQFELDGCDNCERYLGMKGDEEKVSECTSSNFDGMIAATVPEESWVC 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
+W +I R V G Y ++VS LP + + + ++Y P R
Sbjct: 73 KWQKINRKVKGIYAVSVSGTLPSHIVQELKAQNIRYKPNMR 113
>gi|225710614|gb|ACO11153.1| Transcription elongation factor SPT4 1 [Caligus rogercresseyi]
Length = 117
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 6/105 (5%)
Query: 3 SAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNG 61
S + IP +LRACL C L+KT++QF GC+NC F + + E V DCT+ N++G
Sbjct: 2 SDASIIPKDM-RQLRACLVCSLIKTFEQFENDGCDNCDRFLNLKHNRENVYDCTSSNYDG 60
Query: 62 IISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALP----EDLQNL 102
+I P SW +W RI RF G Y ++VS LP +D+Q L
Sbjct: 61 MIGSCKPDDSWVCKWQRINRFKKGVYAISVSGRLPTPVIKDMQAL 105
>gi|378755037|gb|EHY65064.1| hypothetical protein NERG_01510 [Nematocida sp. 1 ERTm2]
Length = 114
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%)
Query: 7 QIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVM 66
+P S LRACL C L+ T QF+E GC NC M + + V+DCTT + G+I +
Sbjct: 2 SLPPSINKRLRACLGCSLIMTQAQFKEEGCGNCTALNMKHNTDNVIDCTTDRYTGVIGLC 61
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPED 98
+ SW A+W + FVPG Y + + LPE
Sbjct: 62 NTKSSWVAKWQHMDTFVPGLYAMTMEGELPES 93
>gi|170106125|ref|XP_001884274.1| transcription elongation factor SPT4 [Laccaria bicolor S238N-H82]
gi|164640620|gb|EDR04884.1| transcription elongation factor SPT4 [Laccaria bicolor S238N-H82]
Length = 121
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 13 GHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRS 71
+LRACL C +++ FR++GC NC +M + +R+ CTT F+G+ISV+DP +S
Sbjct: 14 SKQLRACLLCSIIQLPVDFRKNGCPNCEDVVQMKHNPDRISSCTTTYFDGVISVIDPDKS 73
Query: 72 WAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
W ARW R ++V G Y + V +PED++ E+ ++Y P
Sbjct: 74 WVARWQRTSKYVRGMYAVRVKGRIPEDVEAELENRGLKYRP 114
>gi|430812295|emb|CCJ30235.1| unnamed protein product [Pneumocystis jirovecii]
Length = 119
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C +V Y F GC NC ++ + V +CT+P + GI++VM PT SW A
Sbjct: 15 LRACLLCGIVLPYKHFLSEGCPNCESLLQISASEDLVQECTSPIYEGILAVMQPTESWVA 74
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+W RI RFV G Y + V LPE++ VQY P
Sbjct: 75 KWQRINRFVGGIYAVRVQGQLPEEIVEQLNHRGVQYRP 112
>gi|395330749|gb|EJF63132.1| transcription initiation protein spt4 [Dichomitus squalens LYAD-421
SS1]
Length = 124
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Query: 6 AQIPTS-FGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGII 63
A IP+ +LRACL C +++T FR+ GC NC +M +R+ CTT +F G+I
Sbjct: 9 ASIPSQPRAKQLRACLLCSIIQTPADFRKHGCPNCEELMQMKGYPDRIQACTTTHFEGVI 68
Query: 64 SVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+V+DP SW ARW R ++V G Y + V +PED++ E ++Y P
Sbjct: 69 AVIDPDNSWVARWQRTSKYVRGMYAVRVKGRVPEDVEAELESRNIRYRP 117
>gi|330928238|ref|XP_003302180.1| hypothetical protein PTT_13907 [Pyrenophora teres f. teres 0-1]
gi|311322604|gb|EFQ89723.1| hypothetical protein PTT_13907 [Pyrenophora teres f. teres 0-1]
Length = 289
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Query: 6 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIIS 64
A IP + +RAC+ C +V+T QF GC NC ++ + E++ DCT+ F+G+IS
Sbjct: 170 AYIPPNQQRNMRACMVCSVVRTQQQFLTEGCPNCEDVLELAGNPEQINDCTSQVFDGLIS 229
Query: 65 VMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
V D +RSW AR+ R+ + PG Y V LP+D+ L E + YVP
Sbjct: 230 VSDTSRSWVARYQRLEGYRPGVYATQVEGILPDDVIGLVESAGINYVP 277
>gi|440640480|gb|ELR10399.1| transcription elongation factor spt-4 [Geomyces destructans
20631-21]
Length = 120
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
IP +RAC+ C +V+T F + GC NC F ++ + + DCT+ F G+I++
Sbjct: 6 IPPGQQRNMRACMVCSIVQTQSTFHKEGCPNCEEFLRLQGSMDAIADCTSQVFEGLITLA 65
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDE-RVQYVP 112
+P++SW A+W R+ +V G Y VS LPE++ + E+E R++Y+P
Sbjct: 66 EPSKSWVAKWQRLDGYVRGVYATKVSGILPEEVVDTMENEARIRYIP 112
>gi|336373139|gb|EGO01477.1| hypothetical protein SERLA73DRAFT_48788 [Serpula lacrymans var.
lacrymans S7.3]
gi|336385992|gb|EGO27138.1| hypothetical protein SERLADRAFT_366664 [Serpula lacrymans var.
lacrymans S7.9]
Length = 117
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 4/113 (3%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNF 59
M S P+Q + +LRACL C +V+ FR++GC NC +M +R+ CTT F
Sbjct: 1 MASIPSQAKS---KQLRACLLCSIVQHPMDFRKNGCPNCEELMQMKGSPDRIGVCTTTYF 57
Query: 60 NGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+GII+V+DP SW ARW R ++V G Y V +PED++ E ++Y P
Sbjct: 58 DGIIAVIDPESSWVARWQRTSKYVRGMYAARVKGRIPEDVEAELESRGIKYRP 110
>gi|387593439|gb|EIJ88463.1| hypothetical protein NEQG_01153 [Nematocida parisii ERTm3]
gi|387597096|gb|EIJ94716.1| hypothetical protein NEPG_00239 [Nematocida parisii ERTm1]
Length = 114
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%)
Query: 7 QIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVM 66
+P S +LRACL C L+ T QF+E GC NC M + V+DCTT F G+I +
Sbjct: 2 SLPPSISKKLRACLGCSLIMTQAQFKEEGCGNCVALGMKNSTDNVLDCTTDRFTGMIGMH 61
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPED 98
+ SW A+W + F+PG Y + + LPE
Sbjct: 62 NAKSSWVAKWQHMDSFIPGLYAMTMEGELPES 93
>gi|328766829|gb|EGF76881.1| hypothetical protein BATDEDRAFT_92161 [Batrachochytrium
dendrobatidis JAM81]
Length = 116
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Query: 6 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIIS 64
A+ S +LRACL C L+KT +F+ GC+NC + ER+++CT+ N++G+I+
Sbjct: 2 AETLQSEKRKLRACLLCSLLKTQQRFKMEGCDNCEEVLLFKNNTERMLECTSANYDGVIA 61
Query: 65 VMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
M P SW ARW R+ +F G Y + V LP +++ D+ ++Y P
Sbjct: 62 QMKPEVSWVARWQRVDKFSKGLYAIRVGGQLPYEVEEELIDKGIKYRP 109
>gi|392592821|gb|EIW82147.1| transcription elongation factor SPT4 [Coniophora puteana RWD-64-598
SS2]
Length = 117
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNF 59
M P+Q + +LRACL C +V+ FR++GC NC +M +R+ CTT F
Sbjct: 1 MSVIPSQAKS---KQLRACLLCSIVQHPMDFRKNGCPNCEELMQMKGSPDRINICTTTYF 57
Query: 60 NGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+GII+V+DP SW ARW R ++V G Y + V +PED++ E+ ++Y P
Sbjct: 58 DGIIAVIDPESSWVARWQRTSKYVRGMYAVRVKGRVPEDIETELENRGIKYRP 110
>gi|171694237|ref|XP_001912043.1| hypothetical protein [Podospora anserina S mat+]
gi|170947067|emb|CAP73872.1| unnamed protein product [Podospora anserina S mat+]
Length = 121
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 64/99 (64%), Gaps = 2/99 (2%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRAC+ C +V T+ +FR+ GC NC F + E++ CT+ F G+I++ DPT+SW A
Sbjct: 14 LRACMVCSIVMTHQRFRDEGCPNCEEFLHLQGSSEQIESCTSSVFEGLIAIADPTKSWIA 73
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDE-RVQYVP 112
++ R+ +V G Y V LP++++ + E+E R+QY+P
Sbjct: 74 KYNRLDGYVRGTYANKVLGQLPDEIRTMLEEEYRIQYIP 112
>gi|412990338|emb|CCO19656.1| predicted protein [Bathycoccus prasinos]
Length = 117
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 19/102 (18%)
Query: 9 PTSFGHELRACLRCRLVKTYDQ-------------------FRESGCENCPFFKMDEDHE 49
P F RACLRC+LVKT+DQ F GCENC + + E
Sbjct: 8 PQEFNKHTRACLRCKLVKTFDQVSRSRSTFSITFHPFDHYQFLTDGCENCDTLNLKNNTE 67
Query: 50 RVVDCTTPNFNGIISVMDPTRSWAARWLRIGRFVPGCYTLAV 91
V TT ++G+IS++DP SWA++WLR+G+ PGCY L +
Sbjct: 68 LVSQSTTNEYSGVISLIDPKASWASKWLRLGQSKPGCYALEI 109
>gi|388857621|emb|CCF48770.1| probable SPT4-transcription elongation protein [Ustilago hordei]
Length = 94
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 14 HELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSW 72
+LRACLRC+ V++ F GC NC P +M +RV +CTT NF+G+IS++ P +SW
Sbjct: 6 EKLRACLRCQFVQSPRDFHLKGCPNCEPVLEMQGSQDRVAECTTSNFDGMISMLRPEQSW 65
Query: 73 AARWLRIGRFVPGCYTLAVSEALPEDLQN 101
A+W RI + +PG Y + V LPE +++
Sbjct: 66 VAKWQRIEKRLPGLYAVKVIGRLPEGIES 94
>gi|323453241|gb|EGB09113.1| hypothetical protein AURANDRAFT_25503, partial [Aureococcus
anophagefferens]
Length = 87
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 53/79 (67%)
Query: 30 QFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARWLRIGRFVPGCYTL 89
+F + GCENCPF ++ E +RV CTT +F+G++++M P SW ARW I R +PGCY +
Sbjct: 1 RFFQDGCENCPFLELAERQDRVASCTTASFDGVVAMMKPEESWIARWEGINRSLPGCYAM 60
Query: 90 AVSEALPEDLQNLCEDERV 108
++ +PE ++ D+R+
Sbjct: 61 KLTGEMPEQIRQFLHDKRI 79
>gi|392569154|gb|EIW62328.1| transcription initiation protein spt4 [Trametes versicolor
FP-101664 SS1]
Length = 121
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Query: 1 MGSAPAQIPTS-FGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPN 58
M A IP+ +LRACL C +V+T FR+ GC NC +M +R+ CTT +
Sbjct: 1 MSQIHASIPSQPRAKQLRACLLCSIVQTPADFRKHGCPNCEELMQMKGYPDRIQACTTTH 60
Query: 59 FNGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
F G I+V++P SW ARW R ++V G Y + V +PED++ E+ ++Y P
Sbjct: 61 FEGAIAVINPEDSWVARWQRTSKYVRGMYAVRVKGRVPEDVEAELENRNIKYRP 114
>gi|238494352|ref|XP_002378412.1| transcriptional elongation protein Spt4, putative [Aspergillus
flavus NRRL3357]
gi|317149029|ref|XP_003190270.1| transcription elongation factor spt4 [Aspergillus oryzae RIB40]
gi|220695062|gb|EED51405.1| transcriptional elongation protein Spt4, putative [Aspergillus
flavus NRRL3357]
Length = 120
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 67/110 (60%), Gaps = 6/110 (5%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGI 62
AP+Q T LRAC+ C LV+ + +F GC NC + +++ + +CT+ F G+
Sbjct: 6 APSQQRT-----LRACMVCSLVQLHSKFMREGCPNCDNVLGLRGNNDAIQECTSQVFEGL 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+++ DP SW ARW R+ +VPG Y + V+ +LP+++ + ED V+Y+P
Sbjct: 61 VTLRDPNTSWVARWQRLDSYVPGTYAVKVTGSLPDEIISSLEDSGVKYIP 110
>gi|121712786|ref|XP_001274004.1| transcriptional elongation protein Spt4, putative [Aspergillus
clavatus NRRL 1]
gi|119402157|gb|EAW12578.1| transcriptional elongation protein Spt4, putative [Aspergillus
clavatus NRRL 1]
Length = 120
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 66/110 (60%), Gaps = 6/110 (5%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
AP+Q T LRAC+ C LV+ + +F GC NC + +++ + +CT+ F G+
Sbjct: 6 APSQQRT-----LRACMVCTLVQLHSKFMREGCPNCDSILGLRGNNDAIQECTSQVFEGL 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+++ DPT SW ARW R+ +V G Y + V+ +LP+D+ ED V+Y+P
Sbjct: 61 VTLRDPTTSWVARWQRLDGYVAGTYAVKVTGSLPDDVITNLEDSGVKYIP 110
>gi|119498419|ref|XP_001265967.1| transcriptional elongation protein Spt4, putative [Neosartorya
fischeri NRRL 181]
gi|119414131|gb|EAW24070.1| transcriptional elongation protein Spt4, putative [Neosartorya
fischeri NRRL 181]
Length = 122
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 66/110 (60%), Gaps = 6/110 (5%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGI 62
AP+Q T LRAC+ C LV+ + +F GC NC + +++ + +CT+ F G+
Sbjct: 8 APSQQRT-----LRACMVCSLVQLHSKFMREGCPNCDNVLGLRGNNDAIQECTSQVFEGL 62
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
I++ DPT SW ARW R+ +V G Y + V+ +LP+D+ ED V+Y+P
Sbjct: 63 ITLRDPTTSWVARWQRLEGYVAGTYAVKVTGSLPDDVITNLEDSGVKYIP 112
>gi|170584884|ref|XP_001897221.1| Transcription initiation protein SPT4 homolog 1 [Brugia malayi]
gi|158595375|gb|EDP33934.1| Transcription initiation protein SPT4 homolog 1, putative [Brugia
malayi]
Length = 119
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C ++K+ +QF GC+NC + M D E+V +CT+ NF+G+I+ P SW
Sbjct: 13 LRACLLCSMIKSVEQFELDGCDNCERYLGMKGDEEKVSECTSSNFDGMIAATVPEESWVC 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVPPKR 115
+W +I R G Y ++VS LP + + + ++Y P R
Sbjct: 73 KWQKINRKXKGIYAVSVSGTLPSHIVQELKAQNIRYKPSMR 113
>gi|452986021|gb|EME85777.1| hypothetical protein MYCFIDRAFT_90435 [Pseudocercospora fijiensis
CIRAD86]
Length = 114
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 15 ELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWA 73
+LRACL C + +F++SGC NC F +M + + V DCT+ F G+++V D SW
Sbjct: 7 QLRACLVCSFTQQASKFQKSGCPNCEGFLEMRNNTDAVADCTSEVFEGLVTVNDTNTSWV 66
Query: 74 ARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
A+WLRI +V G Y + V+ L E+ E+ ++Y+P
Sbjct: 67 AKWLRIQGYVAGIYAVKVNGLLAEEYTAAAENAGIRYIP 105
>gi|393215327|gb|EJD00818.1| transcription elongation factor SPT4 [Fomitiporia mediterranea
MF3/22]
Length = 123
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 4/116 (3%)
Query: 1 MGSAP--AQIPTSF-GHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTT 56
M AP A IP++ +LRACL C ++++ FR +GC NC +M + +RV+ CTT
Sbjct: 1 MTDAPPTASIPSNARARQLRACLLCSIIQSPVDFRRNGCPNCEEIMQMKQSQDRVLACTT 60
Query: 57 PNFNGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+F G+I+ +D SW ARW R ++V G Y + V +P+D+ ++ ++Y P
Sbjct: 61 THFEGVIAAIDSEASWVARWQRTSKYVRGMYAVRVKGRIPDDVDQELQERGIRYRP 116
>gi|343427954|emb|CBQ71479.1| probable SPT4-transcription elongation protein [Sporisorium
reilianum SRZ2]
Length = 94
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 14 HELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSW 72
+LRACLRC+ V++ F GC NC P +M +RV +CTT NF+G+IS++ P SW
Sbjct: 6 EKLRACLRCQFVQSPRDFHLKGCPNCEPVLEMQGSQDRVAECTTSNFDGMISMLRPEESW 65
Query: 73 AARWLRIGRFVPGCYTLAVSEALPEDLQ 100
A+W RI + +PG Y + V LPE ++
Sbjct: 66 VAKWQRIEKRLPGLYAVKVVGRLPEGIE 93
>gi|259487638|tpe|CBF86460.1| TPA: transcriptional elongation protein Spt4, putative
(AFU_orthologue; AFUA_5G06690) [Aspergillus nidulans
FGSC A4]
Length = 120
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 65/110 (59%), Gaps = 6/110 (5%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGI 62
AP+Q T LRAC+ C LV+ + +F GC NC + +++ + +CT+ F G+
Sbjct: 6 APSQQRT-----LRACMVCSLVQLHSKFMREGCPNCDNVLGLRGNNDNIQECTSQVFEGL 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
++V DP SW ARW R+ +VPG Y + V+ +LP ++ ED ++Y+P
Sbjct: 61 VTVNDPATSWVARWQRLDGYVPGTYAVKVTGSLPTEVIGHLEDAGIKYIP 110
>gi|331250169|ref|XP_003337696.1| hypothetical protein PGTG_19324 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309316686|gb|EFP93277.1| hypothetical protein PGTG_19324 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 110
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 15 ELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWA 73
+LRAC+ C V++ QFR+ GC NC F +M ERVV+CT+ F+G +++M+P SW
Sbjct: 6 KLRACMVCSFVQSAAQFRKIGCPNCEEFLEMKGSVERVVECTSGTFDGTVAMMNPKESWV 65
Query: 74 ARWLRIGRFVPGCYTLAVSEALPEDL 99
A+W RI PG Y + ++ +LPE +
Sbjct: 66 AKWQRISSHCPGLYAIRITGSLPEHV 91
>gi|453087384|gb|EMF15425.1| transcription initiation Spt4 [Mycosphaerella populorum SO2202]
Length = 115
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 6 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIIS 64
+Q+P LRACL C V+ +++ ++GC NC F ++ + + DCT+ F G+++
Sbjct: 2 SQVP----RGLRACLVCSFVQAANKWSKTGCPNCEDFLELRNSSDAIGDCTSEVFEGLVT 57
Query: 65 VMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
V D + W +RWLRI +VPG Y V+ LPED E+ ++Y+P
Sbjct: 58 VNDTSTGWVSRWLRIQGYVPGVYATKVNGLLPEDYVAAAENAGIRYIP 105
>gi|154271482|ref|XP_001536594.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150409264|gb|EDN04714.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 204
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
+PT LRAC+ C +V+ + +F GC NC + + E++ CT+ F G+I++
Sbjct: 89 VPTGQQRSLRACMVCSIVQVHSKFMREGCPNCDHILGLAGNGEKIQQCTSQVFEGLITLA 148
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
D SW ARW R+ +VPG Y + V+ LP + ED ++Y+P
Sbjct: 149 DQQASWVARWQRLEGYVPGTYAVKVTGTLPPGVLGDLEDSGIRYIP 194
>gi|308322361|gb|ADO28318.1| transcription elongation factor spt4 [Ictalurus furcatus]
Length = 117
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVM 66
+P H LRACL C LVKT DQF G +NC + +M + E V +CT+ +F+ +I++M
Sbjct: 6 VPKDLRH-LRACLLCSLVKTIDQFEYDGYDNCESYLQMKGNREMVYECTSSSFDDVIAMM 64
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALP 96
P SW A+W RIG F G Y + V+ LP
Sbjct: 65 SPEDSWVAKWQRIGNFKAGVYAVTVTGRLP 94
>gi|402225940|gb|EJU06000.1| transcription initiation protein spt4 [Dacryopinax sp. DJM-731 SS1]
Length = 121
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C +V+T +FR+SGC NC + + ++V +CTT F+GII++++P SW A
Sbjct: 18 LRACLLCSIVQTAAEFRKSGCPNCEELLGLRGNVDKVSECTTTAFDGIIAMINPDESWVA 77
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
RW R ++V G Y + VS +P ++++ + + Y P
Sbjct: 78 RWQRTEKYVKGVYAIRVSGRIPHEVEDELVERGINYRP 115
>gi|402467448|gb|EJW02748.1| hypothetical protein EDEG_02857 [Edhazardia aedis USNM 41457]
Length = 117
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 61/105 (58%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMD 67
PT+ + RACL C +++T QFR+ GC NCP ++ + + V+D T+ G+I +++
Sbjct: 6 FPTTITKKHRACLSCGILRTNVQFRKDGCPNCPALQLKNNPDNVLDGTSETHRGLIGLVN 65
Query: 68 PTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
P +SW A+W R G Y + V LP++L + E+ +YVP
Sbjct: 66 PEKSWVAKWQRWSNKTSGAYCMIVEGELPDELISRLEESGKEYVP 110
>gi|169853541|ref|XP_001833450.1| transcription initiation protein spt4 [Coprinopsis cinerea
okayama7#130]
gi|116505489|gb|EAU88384.1| transcription initiation protein spt4 [Coprinopsis cinerea
okayama7#130]
Length = 117
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 9 PTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMD 67
P + +LRACL C +++ FR +GC NC ++ + +R+ CTT F G+I+V+D
Sbjct: 6 PQARSKQLRACLLCSIIQLPADFRRNGCPNCEEILQLKGNTDRISTCTTTYFEGVIAVID 65
Query: 68 PTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
P SW ARW R ++ G Y + V +PED++ E ++Y P
Sbjct: 66 PDNSWVARWQRTSKYARGMYAVRVKGRVPEDVEAELEARDIKYRP 110
>gi|313230235|emb|CBY07939.1| unnamed protein product [Oikopleura dioica]
Length = 119
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 15 ELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWA 73
LRACL C ++KT + F GC+NC + + + +++CT+ +F G+I +M P +SW
Sbjct: 12 NLRACLICSMIKTTEDFERQGCDNCKHYLHFQGNRDLMIECTSSSFTGMIGMMTPDQSWV 71
Query: 74 ARWLRIGRFVPGCYTLAVSEALPEDLQN 101
A+W RI +F PG Y ++V+ LP+ + N
Sbjct: 72 AKWQRIDKFTPGMYAISVNGRLPQSILN 99
>gi|225557873|gb|EEH06158.1| transcription elongation factor spt4 [Ajellomyces capsulatus
G186AR]
gi|240274013|gb|EER37531.1| transcription elongation factor spt-4 [Ajellomyces capsulatus H143]
gi|325095604|gb|EGC48914.1| transcription elongation factor spt-4 [Ajellomyces capsulatus H88]
Length = 121
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
+PT LRAC+ C +V+ + +F GC NC + + E++ CT+ F G+I++
Sbjct: 6 VPTGQQRSLRACMVCSIVQVHSKFMREGCPNCDHILGLAGNGEKIQQCTSQVFEGLITLA 65
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
D SW ARW R+ +VPG Y + V+ LP + ED ++Y+P
Sbjct: 66 DQQASWVARWQRLEGYVPGTYAVKVTGTLPPGVLGDLEDSGIRYIP 111
>gi|409075364|gb|EKM75745.1| hypothetical protein AGABI1DRAFT_79504 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426198014|gb|EKV47940.1| hypothetical protein AGABI2DRAFT_191648 [Agaricus bisporus var.
bisporus H97]
Length = 118
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 9 PTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMD 67
P + G LRACL C +V T FR+ GC NC ++ +R++ CTT NF+G+I++
Sbjct: 7 PQAKGKNLRACLLCSVVLTPTDFRKIGCPNCEEIMQLKGSPDRILSCTTTNFDGVIALFA 66
Query: 68 PTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
P SW ARW R + G Y + V +P+D++ E+ ++Y P
Sbjct: 67 PDTSWVARWQRTTNYARGIYAVHVKGRVPDDVEAELENRGIKYRP 111
>gi|70998484|ref|XP_753964.1| transcriptional elongation protein Spt4 [Aspergillus fumigatus
Af293]
gi|74672993|sp|Q4WU00.1|SPT4_ASPFU RecName: Full=Transcription elongation factor spt4; AltName:
Full=Chromatin elongation factor spt4
gi|66851600|gb|EAL91926.1| transcriptional elongation protein Spt4, putative [Aspergillus
fumigatus Af293]
gi|159126303|gb|EDP51419.1| transcriptional elongation protein Spt4, putative [Aspergillus
fumigatus A1163]
Length = 156
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 3 SAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNG 61
S+ + S LRAC+ C LV+ + +F GC NC + +++ + +CT+ F G
Sbjct: 2 SSSYYVTPSQQRTLRACMVCSLVQLHSKFMRDGCPNCDNVLGLRGNNDAIQECTSQVFEG 61
Query: 62 IISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+I++ DP+ SW ARW R+ +V G Y + V+ +LP+D+ ED V+Y+P
Sbjct: 62 LITLRDPSTSWVARWQRLEGYVAGTYAVKVTGSLPDDVITNLEDSGVRYIP 112
>gi|429962293|gb|ELA41837.1| hypothetical protein VICG_01189 [Vittaforma corneae ATCC 50505]
Length = 119
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Query: 13 GHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSW 72
G + RACL C L++T +FRE GC NCPF ++++ + T+P+F G+I + DP SW
Sbjct: 13 GKKTRACLNCSLIQTVQEFREQGCPNCPFLNVNKNRN-IGYTTSPSFKGMIFLKDPRSSW 71
Query: 73 AARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYV 111
A+W R+ ++ PG Y + V L + + E + YV
Sbjct: 72 VAKWQRVNQYRPGVYAMTVEGVLSDKFIDDIERDGRVYV 110
>gi|385302958|gb|EIF47061.1| transcription elongation factor spt4 [Dekkera bruxellensis
AWRI1499]
Length = 117
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVV-DCTTPNFNGIISVMDPTRSWAAR 75
RAC+ C +V++ +FR GC NC D+E ++ +CT+P F G+++ SW AR
Sbjct: 14 RACMLCGVVQSMTEFRNDGCPNCESVLHFTDNEDMIRECTSPTFEGLVAYKGEKTSWVAR 73
Query: 76 WLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
WLRI FVPG Y + VS LPED+ + ++Y P
Sbjct: 74 WLRIENFVPGMYAVRVSGKLPEDISGDLYSQGIEYRP 110
>gi|327300671|ref|XP_003235028.1| transcriptional elongation protein Spt4 [Trichophyton rubrum CBS
118892]
gi|326462380|gb|EGD87833.1| transcriptional elongation protein Spt4 [Trichophyton rubrum CBS
118892]
Length = 123
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNF 59
M S + + LRAC+ C +V+ +++F GC NC + + E + DCT+ F
Sbjct: 1 MASGSFYVSANQQRSLRACMVCSIVQLHNKFMNEGCPNCEAVLNLRGNSEAIQDCTSQVF 60
Query: 60 NGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
G++++ D SW ARW R+ +VPG Y + V +LP ++ + ED + Y+P
Sbjct: 61 EGLVALADERASWVARWQRLDGYVPGTYAVKVVGSLPPEVLSDLEDAGITYIP 113
>gi|326468589|gb|EGD92598.1| hypothetical protein TESG_00171 [Trichophyton tonsurans CBS 112818]
gi|326479930|gb|EGE03940.1| transcription elongation factor spt4 [Trichophyton equinum CBS
127.97]
Length = 123
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNF 59
M S + + LRAC+ C +V+ +++F GC NC + + E + DCT+ F
Sbjct: 1 MASGSFYVSANQQRSLRACMVCSIVQLHNKFMNEGCPNCEAVLNLRGNSEAIQDCTSQVF 60
Query: 60 NGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
G++++ D SW ARW R+ +VPG Y + V +LP ++ + ED + Y+P
Sbjct: 61 EGLVALADERTSWVARWQRLDGYVPGTYAVKVVGSLPPEVLSDLEDAGITYIP 113
>gi|209881023|ref|XP_002141950.1| transcription elongation factor SPT4 [Cryptosporidium muris RN66]
gi|209557556|gb|EEA07601.1| transcription elongation factor SPT4, putative [Cryptosporidium
muris RN66]
Length = 128
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAAR 75
LR+CL CR++ + QF E GC NC M+ D +V CTT ++ G+IS++ P SW AR
Sbjct: 38 LRSCLSCRIILSDQQFYEKGCPNCTHLAMEFDRHKVNSCTTTSYKGMISMLKPELSWVAR 97
Query: 76 WLRIGRFVPGCYTLAVSEALPEDLQNLCEDE 106
+ RI PGCY ++VS L D + EDE
Sbjct: 98 YNRITDVTPGCYAVSVSGDLMYDNRGY-EDE 127
>gi|261198505|ref|XP_002625654.1| transcriptional elongation protein Spt4 [Ajellomyces dermatitidis
SLH14081]
gi|239594806|gb|EEQ77387.1| transcriptional elongation protein Spt4 [Ajellomyces dermatitidis
SLH14081]
gi|239610073|gb|EEQ87060.1| transcriptional elongation protein Spt4 [Ajellomyces dermatitidis
ER-3]
Length = 121
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
+PT LRAC+ C +V+ + +F GC NC + + E++ CT+ F G+I++
Sbjct: 6 VPTGQQRSLRACMVCSIVQVHSKFMREGCPNCDHILGLAGNGEKIQQCTSQVFEGLITLA 65
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
D SW ARW R+ +V G Y + V+ LP + ED V+YVP
Sbjct: 66 DQRASWVARWQRLEGYVSGTYAVKVTGTLPPGVLGDLEDSGVRYVP 111
>gi|156082922|ref|XP_001608945.1| transcription factor [Babesia bovis T2Bo]
gi|154796195|gb|EDO05377.1| transcription factor, putative [Babesia bovis]
Length = 136
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 13/87 (14%)
Query: 15 ELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
+LRACL CRL+ + DQ MD D R +DCTT NF+G++S+MDP +SWAA
Sbjct: 59 KLRACLSCRLIMSEDQ-------------MDGDRRRTLDCTTANFSGLLSIMDPQKSWAA 105
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQN 101
R+ + +PGCY ++V LPE + +
Sbjct: 106 RYNSLVDVIPGCYAISVVGELPESVHD 132
>gi|407926290|gb|EKG19257.1| Transcription initiation Spt4-like protein [Macrophomina
phaseolina MS6]
Length = 101
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 2 GSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMD-EDHERVVDCTTPNFN 60
G++ + + S LRAC+ C V+ +FR+ GC NC F +M D + DCT+ F
Sbjct: 3 GTSRSYVTPSQQRHLRACMVCSFVQPASKFRQLGCPNCEFLEMQGADEAHIADCTSAVFE 62
Query: 61 GIISVMDPTRSWAARWLRIGRFVPGCYTLAVS 92
G+I++ DP++SW A+W R+ +VPG Y VS
Sbjct: 63 GLIALADPSQSWVAKWQRLDAYVPGMYATKVS 94
>gi|315048367|ref|XP_003173558.1| transcription elongation factor spt4 [Arthroderma gypseum CBS
118893]
gi|311341525|gb|EFR00728.1| transcription elongation factor spt4 [Arthroderma gypseum CBS
118893]
Length = 123
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNF 59
M S + S LRAC+ C +V+ +++F GC NC + + E + DCT+ F
Sbjct: 1 MASGSFYVSASQQRSLRACMVCSIVQLHNKFMNEGCPNCEAVLNLRGNTEAIQDCTSQVF 60
Query: 60 NGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
G++++ D SW ARW R+ +VPG Y + V +LP ++ + E+ + Y+P
Sbjct: 61 EGLVALADERTSWVARWQRLDGYVPGTYAVKVVGSLPPEVLSDLEEAGITYIP 113
>gi|296809147|ref|XP_002844912.1| transcription elongation factor spt4 [Arthroderma otae CBS 113480]
gi|238844395|gb|EEQ34057.1| transcription elongation factor spt4 [Arthroderma otae CBS 113480]
Length = 123
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNF 59
M S + S LRAC+ C +V+ +++F GC NC + + E + DCT+ F
Sbjct: 1 MASGSFYVTASQQRSLRACMVCSIVQLHNKFMNEGCPNCESVLNLRGNTEAIQDCTSQVF 60
Query: 60 NGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
G++++ D SW ARW R+ +VPG Y + V +LP ++ + E+ + Y+P
Sbjct: 61 EGLVALADERTSWVARWQRLDGYVPGTYAVKVVGSLPPEVLSDLEEAGITYIP 113
>gi|226290579|gb|EEH46063.1| transcription elongation factor spt4 [Paracoccidioides brasiliensis
Pb18]
Length = 122
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
+P+ LRAC+ C +V+ + +F GC NC + + E++ CT+ F G+I++
Sbjct: 7 VPSGQQRSLRACMVCSIVQVHSKFMREGCPNCDHILGLAGNGEKIQQCTSQVFEGLITLA 66
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
D SW ARW R+ +VPG Y + V+ LP + ED +Y+P
Sbjct: 67 DQRASWVARWQRLDGYVPGTYAVKVTGTLPPGVLGDLEDAGFRYIP 112
>gi|295674769|ref|XP_002797930.1| transcription elongation factor spt4 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|225678365|gb|EEH16649.1| transcription elongation factor spt4 [Paracoccidioides brasiliensis
Pb03]
gi|226280580|gb|EEH36146.1| transcription elongation factor spt4 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 121
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
+P+ LRAC+ C +V+ + +F GC NC + + E++ CT+ F G+I++
Sbjct: 6 VPSGQQRSLRACMVCSIVQVHSKFMREGCPNCDHILGLAGNGEKIQQCTSQVFEGLITLA 65
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
D SW ARW R+ +VPG Y + V+ LP + ED +Y+P
Sbjct: 66 DQRASWVARWQRLDGYVPGTYAVKVTGTLPPGVLGDLEDAGFRYIP 111
>gi|344234638|gb|EGV66506.1| transcription initiation Spt4 [Candida tenuis ATCC 10573]
Length = 112
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 17 RACLRCRLVKTYDQFRESGCENCP--FFKMDEDHERVVDCTTPNFNGIISVMDPTR-SWA 73
RAC+ C +++TY +F + GC NC D D ++ DCT+P+F G++++ D + SW
Sbjct: 7 RACMLCGIIQTYRKFVDEGCPNCESVLHYQDNDDNQIQDCTSPSFEGLVALGDDNKQSWV 66
Query: 74 ARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
ARWLRI FVP Y + ++ LP + + ++ V Y P
Sbjct: 67 ARWLRIDSFVPALYAVKINGKLPPHIVSDLLEQNVNYRP 105
>gi|242793589|ref|XP_002482195.1| transcriptional elongation protein Spt4, putative [Talaromyces
stipitatus ATCC 10500]
gi|218718783|gb|EED18203.1| transcriptional elongation protein Spt4, putative [Talaromyces
stipitatus ATCC 10500]
Length = 121
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 5 PAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGII 63
P QI T LRAC+ C +V +F GC NC ++ +++ + +CT+ F G+I
Sbjct: 8 PGQIRT-----LRACMVCSVVMPQSKFAREGCPNCEHVLQLRGNNDAIQECTSQVFEGLI 62
Query: 64 SVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
S++D +SW ARW R+ +VPG Y + V+ LP + ED ++Y+P
Sbjct: 63 SIIDERQSWVARWQRLEGYVPGTYAIKVTGTLPTETIASLEDAGIKYIP 111
>gi|212535630|ref|XP_002147971.1| transcriptional elongation protein Spt4, putative [Talaromyces
marneffei ATCC 18224]
gi|210070370|gb|EEA24460.1| transcriptional elongation protein Spt4, putative [Talaromyces
marneffei ATCC 18224]
Length = 120
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 5 PAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGII 63
P Q+ T LRAC+ C +V +F GC NC ++ +++ + +CT+ F G+I
Sbjct: 8 PGQVRT-----LRACMVCSVVMPQSKFAREGCPNCEHVLQLRGNNDAIQECTSQVFEGLI 62
Query: 64 SVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
S++D +SW ARW R+ +VPG Y + V+ LP + ED ++Y+P
Sbjct: 63 SIIDERQSWVARWQRLEGYVPGTYAMKVTGTLPTETVASLEDAGIKYIP 111
>gi|353242137|emb|CCA73805.1| related to SPT4-transcription elongation protein [Piriformospora
indica DSM 11827]
Length = 116
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNF 59
M + P P+ LRACL C +++T FR+ GC NC F +M + +RV CTT F
Sbjct: 1 MAAVP---PSGRAKNLRACLVCTIIQTSMDFRKKGCPNCEHFLEMRGNTDRVNTCTTAQF 57
Query: 60 NGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQ 100
+G+ ++M+P SW ARW R+ V G Y + +S +P+ L+
Sbjct: 58 DGMTAIMNPKESWVARWKRVDISVRGIYAVRLSAKIPDVLR 98
>gi|210076027|ref|XP_002143111.1| YALI0F13354p [Yarrowia lipolytica]
gi|199424956|emb|CAR65201.1| YALI0F13354p [Yarrowia lipolytica CLIB122]
Length = 110
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Query: 17 RACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAAR 75
RAC+ C +V+ F GC NC M D DCT+P+F G +++ DP+ SW ++
Sbjct: 7 RACMLCGIVQPLKAFISKGCPNCDSVLDMKADDSLTQDCTSPSFEGQVALCDPSSSWVSK 66
Query: 76 WLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
WLRI F PG Y + V+ LP+D+ + + + V Y P
Sbjct: 67 WLRIDGFQPGLYAVKVNGKLPQDIVDDLKSKGVVYRP 103
>gi|326931144|ref|XP_003211694.1| PREDICTED: transcription elongation factor SPT4 1-like [Meleagris
gallopavo]
Length = 149
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 19 CLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARWL 77
CL C L KT +QF GC+NC + +M + E V DCT+ +F+GII++M P SW ++W
Sbjct: 49 CLVCSL-KTLEQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMMSPEDSWVSKWQ 107
Query: 78 RIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
RI F PG Y ++V+ LP+ + + V Y
Sbjct: 108 RISNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 140
>gi|126644177|ref|XP_001388224.1| transcription factor [Cryptosporidium parvum Iowa II]
gi|126117297|gb|EAZ51397.1| transcription factor, putative [Cryptosporidium parvum Iowa II]
Length = 124
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAAR 75
LRACL CR++ + QF E GC NC M+ D ++V CT+ +F G+IS++ P SW AR
Sbjct: 32 LRACLSCRIILSDQQFYEGGCPNCTHLAMEFDRQKVNSCTSMSFKGMISMLKPNESWVAR 91
Query: 76 WLRIG-RFVPGCYTLAVSEALPED 98
+ ++ VPGCY ++VS + D
Sbjct: 92 YNKLLPNIVPGCYAVSVSGDMVSD 115
>gi|294949442|ref|XP_002786199.1| suppressor of ty, putative [Perkinsus marinus ATCC 50983]
gi|239900356|gb|EER17995.1| suppressor of ty, putative [Perkinsus marinus ATCC 50983]
Length = 471
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 6 AQIPTSFG-HELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIIS 64
+ IP + H+LR CLRC ++ + QF GC NC M+ D V D TT NF+G +S
Sbjct: 21 SMIPDTLNNHQLRCCLRCHIILSVSQFVRHGCPNCQDIDMEGDKTLVEDYTTKNFSGGVS 80
Query: 65 VMDPTRSWAARWLRIGRFVPGCYTLAV 91
VM+P+RSW AR L++ F G Y +A
Sbjct: 81 VMNPSRSWVARQLKLSTFCAGMYAVAA 107
>gi|346974577|gb|EGY18029.1| transcription elongation factor spt-4 [Verticillium dahliae
VdLs.17]
Length = 112
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRAC+ C +V T +FR+ GC NC + E++ CT+ F G+I++ DP+RSW A
Sbjct: 14 LRACMVCSIVMTTARFRDEGCPNCEEVLHLAGSQEQIESCTSQVFEGLITLADPSRSWVA 73
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERV-QYVP 112
+W R+ +V G Y VS LP++++ E+E +Y+P
Sbjct: 74 KWQRLDGYVKGVYATKVSGQLPDEVRMQLEEEYGRRYIP 112
>gi|156065111|ref|XP_001598477.1| hypothetical protein SS1G_00566 [Sclerotinia sclerotiorum 1980]
gi|154691425|gb|EDN91163.1| hypothetical protein SS1G_00566 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 117
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Query: 27 TYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARWLRIGRFVPG 85
T ++F GC NC F + E ++DCT+ F G+I++ DP++SW A+W R+ +V G
Sbjct: 2 TQNRFMREGCPNCEDFLHLQGSMEAIIDCTSQVFEGLITLADPSKSWVAKWQRLDGYVRG 61
Query: 86 CYTLAVSEALPEDLQNLCEDE-RVQYVPP 113
Y VS LPE++ + E+E RV+Y+PP
Sbjct: 62 VYATKVSGQLPEEIVSTMEEEARVKYIPP 90
>gi|344300768|gb|EGW31089.1| hypothetical protein SPAPADRAFT_63016 [Spathaspora passalidarum
NRRL Y-27907]
Length = 112
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHE--RVVDCTTPNFNGIISV-MDPTRSWA 73
RAC+ C +++ + +F +GC NC +D+E ++ DCT+P+F G +++ D SW
Sbjct: 7 RACMLCGIIQPFKKFYSAGCPNCESLLHYQDNEDGQIQDCTSPSFEGTVALGADNKESWV 66
Query: 74 ARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
ARWLRI F PG Y + V+ LP D+ E++ V Y P
Sbjct: 67 ARWLRIDSFAPGLYAVKVNGKLPPDIIRDLEEQNVIYRP 105
>gi|378730250|gb|EHY56709.1| hypothetical protein HMPREF1120_04779 [Exophiala dermatitidis
NIH/UT8656]
Length = 117
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 13 GHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRS 71
G RAC+ C +V +F ++GC NC + + + +CT+ F G+I + DP S
Sbjct: 5 GSRQRACMVCSIVLNASEFYKNGCPNCESILGLRNSQDAIQECTSQVFEGLIMLGDPKAS 64
Query: 72 WAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
W A+W R+ +VPG Y + V LP+++ + ED ++Y+P
Sbjct: 65 WVAKWQRLTNYVPGIYAVKVVGQLPQEIIDTMEDNGMRYIP 105
>gi|290983088|ref|XP_002674261.1| predicted protein [Naegleria gruberi]
gi|284087850|gb|EFC41517.1| predicted protein [Naegleria gruberi]
Length = 129
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 7/84 (8%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMD 67
IPT F +LRACL C LVKT DQF+++GCENCP D D + TT +F G+I++M+
Sbjct: 48 IPTHF-RQLRACLTCGLVKTTDQFKQNGCENCP---KDND---TLSNTTTSFEGLITLMN 100
Query: 68 PTRSWAARWLRIGRFVPGCYTLAV 91
P +SW AR+ + V G Y + V
Sbjct: 101 PQKSWVARYQNLQDKVEGVYAITV 124
>gi|84999014|ref|XP_954228.1| possible transcription initiation protein spt4-like, putatve
[Theileria annulata]
gi|65305226|emb|CAI73551.1| possible transcription initiation protein spt4-like, putatve
[Theileria annulata]
Length = 230
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 40/130 (30%)
Query: 10 TSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPT 69
T + H + + R L F E+GC NC F +MD DH R++DCT+ NFNG IS++DP
Sbjct: 111 TLYTHRISSLSRGYL------FYENGCGNCSFLQMDGDHRRILDCTSSNFNGFISIIDPQ 164
Query: 70 RSWAARWLRI------------------------------GRFVPGCYTLAVSEALPEDL 99
+SW+AR+ + +PGCY ++V+ LPE +
Sbjct: 165 KSWSARYNNLSIPVTVLVHTSPERGFLTPERASFSYTVIYNDLIPGCYAISVNGTLPESI 224
Query: 100 QNLCEDERVQ 109
+ DE +Q
Sbjct: 225 K----DELLQ 230
>gi|296416963|ref|XP_002838138.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634045|emb|CAZ82329.1| unnamed protein product [Tuber melanosporum]
Length = 122
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNF 59
M S +PT+ LRAC+ C +V+T +F + GC NC + + DCT+P F
Sbjct: 1 MSSGSNFVPTNQYRHLRACMVCSVVQTQQKFIKDGCPNCEDYLNFRGQPDFADDCTSPVF 60
Query: 60 NGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
G+I++ DP SW A+W R+ + G Y + VS LP + ++ ++Y P
Sbjct: 61 EGLITLRDPKNSWVAKWQRLDGYRKGVYAVKVSGNLPIEALDMLASHNIEYRP 113
>gi|328873524|gb|EGG21891.1| transcription initiation factor Spt4 [Dictyostelium fasciculatum]
Length = 131
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 6 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISV 65
+ +P S LRACL C LVKT +QF + GCENC + + TT NF G+IS+
Sbjct: 42 STVPNSL-KNLRACLSCGLVKTINQFEDKGCENCDRSSRTYRRDDALASTTANFEGLISM 100
Query: 66 MDPTRSWAARWLRIGRFVPGCYTLAV 91
M P SW AR I VPGCY L++
Sbjct: 101 MKPNESWVARKQHIEGKVPGCYALSI 126
>gi|149238231|ref|XP_001524992.1| transcription elongation factor SPT4 [Lodderomyces elongisporus
NRRL YB-4239]
gi|146451589|gb|EDK45845.1| transcription elongation factor SPT4 [Lodderomyces elongisporus
NRRL YB-4239]
Length = 111
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Query: 17 RACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISV-MDPTRSWAA 74
RAC+ C +++ +F+ GC NC D ++ +CT+P+F G++++ D SW A
Sbjct: 7 RACMLCGIIQPMKKFKAIGCPNCESLLHFASDSAQIAECTSPSFEGLVALGQDNKGSWVA 66
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
RWLRI FVPG Y + V+ LP D+ + E V Y P
Sbjct: 67 RWLRIDSFVPGLYAVKVNGKLPLDVVDSLERADVYYRP 104
>gi|119181933|ref|XP_001242133.1| hypothetical protein CIMG_06029 [Coccidioides immitis RS]
gi|320034562|gb|EFW16506.1| transcriptional elongation protein Spt4 [Coccidioides posadasii
str. Silveira]
gi|392865024|gb|EAS30764.2| transcription elongation factor spt4 [Coccidioides immitis RS]
Length = 120
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRAC+ C +V+ + +F GC NC PF + + + + +CT+ F G+I++ + SW A
Sbjct: 13 LRACMVCSIVQLHSKFMRDGCPNCEPFLNLRNNADSIQECTSQVFEGLIALANERLSWVA 72
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
RW R+ +V G Y + V LP ++ ED V+Y P
Sbjct: 73 RWQRLDGYVSGTYAVKVVGTLPPEVLATLEDAGVKYFP 110
>gi|443919743|gb|ELU39820.1| Spt4 domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 133
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 15 ELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWA 73
LRACL C +++T F+ GC NC ++ E V T+ F+G+I++M+P SW
Sbjct: 12 NLRACLLCSIIQTAQDFKRVGCPNCDEILQLKGSSENVQHRTSATFDGVIALMNPEDSWV 71
Query: 74 ARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
RW R+ ++V G Y + VS +PED+ + + Y P
Sbjct: 72 GRWQRVHKYVKGMYAVRVSGRVPEDVIDDLHSRGITYRP 110
>gi|448515840|ref|XP_003867426.1| hypothetical protein CORT_0B02730 [Candida orthopsilosis Co 90-125]
gi|380351765|emb|CCG21988.1| hypothetical protein CORT_0B02730 [Candida orthopsilosis]
Length = 154
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 17 RACLRCRLVKTYDQFRESGCENCP----FFKMDEDHERVVDCTTPNFNGIISV-MDPTRS 71
RAC+ C +++ F+ GC NC F D+D + DCT+P+F G++++ D S
Sbjct: 47 RACMLCGIIQPVKAFKTEGCPNCESLLQFRNPDQDFNPITDCTSPSFEGLVALGEDHKES 106
Query: 72 WAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
W ARWLRI FVPG Y + ++ LP + E + V Y P
Sbjct: 107 WVARWLRIDNFVPGLYAVKINGKLPPIVIEHLESQNVIYRP 147
>gi|398391368|ref|XP_003849144.1| transcription elongation factor SPT4 [Zymoseptoria tritici IPO323]
gi|339469020|gb|EGP84120.1| transcription elongation factor SPT4 [Zymoseptoria tritici IPO323]
Length = 115
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
LRACL C V+ + +F ++GC NC F +M + V +CT+ F G++ V D SW A
Sbjct: 8 LRACLICSFVQPHSRFIKNGCPNCEHFLEMRNSSDVVAECTSEVFEGVMEVNDTNTSWVA 67
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+W R+ +VPG Y + V+ L +D E V Y+P
Sbjct: 68 KWQRLEGYVPGMYAVKVNGVLSDDYIVAAESAGVTYMP 105
>gi|46126031|ref|XP_387569.1| hypothetical protein FG07393.1 [Gibberella zeae PH-1]
Length = 99
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 27 TYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARWLRIGRFVPG 85
T +F+ GC NC F + +++ CT+ F G+I++ +PT+SW A++ R+ +VPG
Sbjct: 2 TSQRFQNEGCPNCEEFLHLQHSPDQIESCTSQVFEGVITLANPTKSWIAKYQRLDSYVPG 61
Query: 86 CYTLAVSEALPEDLQNLCEDE-RVQYVP 112
Y + VS LP+D+++ EDE R+QY+P
Sbjct: 62 MYAIKVSGQLPDDVRSTLEDEYRIQYIP 89
>gi|215259569|gb|ACJ64276.1| transcription elongation factor SPT4 [Culex tarsalis]
Length = 91
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 29 DQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARWLRIGRFVPGCY 87
DQF GCENC F +M + ++V DCT+ NF+G+++VM P SW +W RI RF G Y
Sbjct: 1 DQFEYDGCENCEDFLRMKGNKDQVYDCTSNNFDGMVAVMSPDDSWVCKWQRINRFTKGIY 60
Query: 88 TLAVSEALPEDLQNLCEDERVQYVP 112
++VS LP + ++ + Y P
Sbjct: 61 AISVSGRLPNGIIRDMKNRGIPYRP 85
>gi|146418709|ref|XP_001485320.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
gi|146390793|gb|EDK38951.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 112
Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHE--RVVDCTTPNFNGIISVMDPTR-SWA 73
RAC+ C +++ + F + GC NC +D+E +V DCT+P+F G++++ D + SW
Sbjct: 7 RACMLCGIIQPFRHFIDRGCPNCESVLHYQDNEDNQVQDCTSPSFEGLVALGDDNKKSWV 66
Query: 74 ARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
ARWLRI FVPG Y + V+ LP + + ++ V Y P
Sbjct: 67 ARWLRIDSFVPGLYAVKVTGKLPPHIISDLAEQNVIYRP 105
>gi|58271468|ref|XP_572890.1| transcription initiation protein spt4 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134115156|ref|XP_773876.1| hypothetical protein CNBH3280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321262238|ref|XP_003195838.1| transcription initiation protein spt4 [Cryptococcus gattii WM276]
gi|338819502|sp|P0CR69.1|SPT4_CRYNB RecName: Full=Transcription elongation factor SPT4; AltName:
Full=Chromatin elongation factor SPT4
gi|338819503|sp|P0CR68.1|SPT4_CRYNJ RecName: Full=Transcription elongation factor SPT4; AltName:
Full=Chromatin elongation factor SPT4
gi|50256504|gb|EAL19229.1| hypothetical protein CNBH3280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229149|gb|AAW45583.1| transcription initiation protein spt4, putative [Cryptococcus
neoformans var. neoformans JEC21]
gi|317462312|gb|ADV24051.1| transcription initiation protein spt4, putative [Cryptococcus
gattii WM276]
gi|405122169|gb|AFR96936.1| transcription initiation protein spt4 [Cryptococcus neoformans var.
grubii H99]
Length = 113
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 9 PTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMD 67
P S ELRACL C ++++ + F GC NC +M ERV +CT+ ++G+I++++
Sbjct: 3 PKSGRAELRACLVCSILQSTNDFLTQGCPNCEDILEMRGSAERVAECTSLLYDGMIAMIE 62
Query: 68 PTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
P+ SW ARW RI + + G Y + V+ P+D+ + E Y P
Sbjct: 63 PSESWVARWQRIDKRMRGIYAVRVTGRAPQDVIDAIEARGGVYRP 107
>gi|164658774|ref|XP_001730512.1| hypothetical protein MGL_2308 [Malassezia globosa CBS 7966]
gi|159104408|gb|EDP43298.1| hypothetical protein MGL_2308 [Malassezia globosa CBS 7966]
Length = 92
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 15 ELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWA 73
+LRACLRC +T +F GC NC M ERV D TT NF+G+I ++ P SW
Sbjct: 6 KLRACLRCHFAQTAAEFHAKGCPNCQDMLDMQGSQERVADFTTSNFDGLICMLRPEESWV 65
Query: 74 ARWLRIGRFVPGCYTLAVSEALPE 97
A+W RI + + G Y + V LPE
Sbjct: 66 AKWQRIEKRMVGLYAVKVVGRLPE 89
>gi|354547294|emb|CCE44028.1| hypothetical protein CPAR2_502530 [Candida parapsilosis]
Length = 114
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 17 RACLRCRLVKTYDQFRESGCENCP----FFKMDEDHERVVDCTTPNFNGIISV-MDPTRS 71
RAC+ C +++ F++ GC NC F D+D + DCT+P+F G++++ D S
Sbjct: 7 RACMLCGIIQPVKTFKQDGCPNCEGLLHFQNNDQDFNPITDCTSPSFEGLVAMGEDDKES 66
Query: 72 WAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
W ARWLRI FVPG Y + ++ LP + E V Y P
Sbjct: 67 WVARWLRIDSFVPGLYAVKINGKLPPIVIEHLEASDVIYRP 107
>gi|260948074|ref|XP_002618334.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238848206|gb|EEQ37670.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 101
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 17 RACLRCRLVKTYDQFRESGCENCP--FFKMDEDHERVVDCTTPNFNGIISVMDPTR-SWA 73
RAC+ C +++TY +F E GC NC D + ++ DCT+P+F G++++ D + SW
Sbjct: 7 RACMLCGIIQTYRRFLEQGCPNCESVLHYADNEDGQIQDCTSPSFEGLVALGDDNKASWV 66
Query: 74 ARWLRIGRFVPGCYTLAVSEALP 96
ARWLRI FV G Y + V+ LP
Sbjct: 67 ARWLRIDSFVAGLYAVKVNGKLP 89
>gi|444720812|gb|ELW61581.1| Transcription elongation factor SPT4 [Tupaia chinensis]
Length = 120
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 26 KTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARWLRIGRFVP 84
+T DQF GC+NC + +M + E V DCT+ +F+GII++M P SW ++W R+ F P
Sbjct: 26 RTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMMSPEDSWVSKWQRVSNFKP 85
Query: 85 GCYTLAVSEALPEDLQNLCEDERVQY 110
G Y ++V+ LP+ + + V Y
Sbjct: 86 GVYAVSVTGRLPQGIVRELKSRGVAY 111
>gi|448121607|ref|XP_004204251.1| Piso0_000082 [Millerozyma farinosa CBS 7064]
gi|448123981|ref|XP_004204804.1| Piso0_000082 [Millerozyma farinosa CBS 7064]
gi|358249437|emb|CCE72503.1| Piso0_000082 [Millerozyma farinosa CBS 7064]
gi|358349790|emb|CCE73069.1| Piso0_000082 [Millerozyma farinosa CBS 7064]
Length = 112
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHE--RVVDCTTPNFNGIISV-MDPTRSWA 73
RAC+ C +++ Y +F + GC NC +D+E +V DCT+P+F G++++ D SW
Sbjct: 7 RACMLCGIIQPYRKFVDKGCPNCESVLHYQDNEDNQVQDCTSPSFEGLVALGEDSKESWV 66
Query: 74 ARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
ARWLRI FV G Y + + LP + +++ V Y P
Sbjct: 67 ARWLRIDSFVAGLYAVKIHGKLPPHIIEDLQEQNVHYRP 105
>gi|45199094|ref|NP_986123.1| AFR576Cp [Ashbya gossypii ATCC 10895]
gi|74692456|sp|Q752J8.1|SPT4_ASHGO RecName: Full=Transcription elongation factor SPT4; AltName:
Full=Chromatin elongation factor SPT4
gi|44985169|gb|AAS53947.1| AFR576Cp [Ashbya gossypii ATCC 10895]
gi|374109354|gb|AEY98260.1| FAFR576Cp [Ashbya gossypii FDAG1]
Length = 102
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
RAC+ C +V+T ++F GC NC +E ++CT+P+F G++ + PT+SW A+W
Sbjct: 5 RACMLCGIVQTTNEFTRDGCPNCQGI-FEEASVSAIECTSPSFEGLVGMCKPTKSWVAKW 63
Query: 77 LRIGRFVPGCYTLAVSEALPEDLQNL 102
+ + ++VPG Y + V LP ++ +L
Sbjct: 64 ISVEQYVPGMYAIKVDGRLPVEVVDL 89
>gi|254568280|ref|XP_002491250.1| Protein that forms a complex with Spt5p and mediates both
activation and inhibition of transcription [Komagataella
pastoris GS115]
gi|238031047|emb|CAY68970.1| Protein that forms a complex with Spt5p and mediates both
activation and inhibition of transcription [Komagataella
pastoris GS115]
gi|328352231|emb|CCA38630.1| Transcription elongation factor SPT4 [Komagataella pastoris CBS
7435]
Length = 114
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP--FFKMDEDHERVVDCTTPNFNGIISV 65
+ T+ G RAC+ C +V F ++GC NC D D V +CT+ +F G+++V
Sbjct: 1 MSTNKGVRERACMLCGIVLPGRVFMQNGCPNCDSVLNLRDSDQATVNECTSSSFEGLVAV 60
Query: 66 MDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
D SW A+WLR+ RF PG Y + V LP D+ E V Y P
Sbjct: 61 GDNEHSWVAKWLRVDRFQPGLYAVRVDGRLPSDIVAALEQYGVYYRP 107
>gi|302673012|ref|XP_003026193.1| hypothetical protein SCHCODRAFT_62522 [Schizophyllum commune H4-8]
gi|300099874|gb|EFI91290.1| hypothetical protein SCHCODRAFT_62522 [Schizophyllum commune H4-8]
Length = 124
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 2 GSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFN 60
G A P + H LRAC+ C L++T F+ GC NC ++ +RV TT F
Sbjct: 7 GQASIPGPKTTRH-LRACMLCSLIQTSADFKRHGCPNCDEVLQLRGSLDRVQMYTTNQFE 65
Query: 61 GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
G+I+V+DP +SW ARW R + V G Y + V + ++++ E ++Y P
Sbjct: 66 GVIAVIDPEQSWVARWQRTAKQVRGMYAVRVKGRIGQEMEETLEARGIKYRP 117
>gi|363754511|ref|XP_003647471.1| hypothetical protein Ecym_6273 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891108|gb|AET40654.1| hypothetical protein Ecym_6273 [Eremothecium cymbalariae
DBVPG#7215]
Length = 102
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
RAC+ C +V++ +F GC NC +E ++CT+P+F G++ + PT+SW A+W
Sbjct: 5 RACMLCGIVQSTSEFTRDGCPNCQGI-FEEASVSAIECTSPSFEGLVGMCKPTKSWVAKW 63
Query: 77 LRIGRFVPGCYTLAVSEALPEDLQNL 102
+ + ++VPG Y + V LP ++ +L
Sbjct: 64 ISVDQYVPGMYAIKVDGRLPAEVVDL 89
>gi|50303877|ref|XP_451886.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|3122867|sp|P81205.1|SPT4_KLULA RecName: Full=Transcription elongation factor SPT4; AltName:
Full=Chromatin elongation factor SPT4
gi|49641018|emb|CAH02279.1| KLLA0B07997p [Kluyveromyces lactis]
Length = 102
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
RAC+ C LV++ +F +GC NC +E V+CT+P+F G++ + P+RSW ARW
Sbjct: 5 RACMLCGLVQSTAEFNRNGCPNCQSI-FEEAGVSAVECTSPSFEGLVGMCKPSRSWVARW 63
Query: 77 LRIGRFVPGCYTLAVSEALPEDLQNL 102
+ I ++PG Y + + LP ++ L
Sbjct: 64 MSIDSYIPGMYAVKIDGRLPIEVTEL 89
>gi|366986821|ref|XP_003673177.1| hypothetical protein NCAS_0A02280 [Naumovozyma castellii CBS 4309]
gi|342299040|emb|CCC66786.1| hypothetical protein NCAS_0A02280 [Naumovozyma castellii CBS 4309]
Length = 102
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
RAC+ C +V+T ++F GC NC +E ++CT+P+F G++ + PT+SW A+W
Sbjct: 5 RACMLCGIVQTTNEFSRDGCPNCQGI-FEEAGVSTMECTSPSFEGLVGMCKPTKSWVAKW 63
Query: 77 LRIGRFVPGCYTLAVSEALPEDLQNL 102
L + ++PG Y + V LP ++ L
Sbjct: 64 LSVDPYIPGMYAIKVDGRLPAEVVEL 89
>gi|388579003|gb|EIM19333.1| transcription initiation protein spt4 [Wallemia sebi CBS 633.66]
Length = 111
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%)
Query: 15 ELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
+ RACL C ++ +F+ GC NCPF +M E V DCT+ ++GI+++ P SW
Sbjct: 8 KFRACLMCSYLQEGKEFKLKGCPNCPFLEMKGSSESVTDCTSGQYDGIVALTQPKGSWVG 67
Query: 75 RWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
+W R+ G Y + V+ L +++ + + + Y P
Sbjct: 68 KWQRVNTCEKGLYAVRVTGRLADNIVDNLQAHGIPYRP 105
>gi|326438060|gb|EGD83630.1| transcription elongation factor SPT4 [Salpingoeca sp. ATCC 50818]
Length = 114
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 5 PAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGII 63
P I + +LRAC+ C LVKT QF E+GCENC F + + E V CT+ NF+GII
Sbjct: 8 PMDICPAQTKKLRACIACGLVKTSQQFVENGCENCEEFLGLKGNPEGVETCTSGNFHGII 67
Query: 64 SVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPE 97
++++P SW AR R+G AV E LPE
Sbjct: 68 ALIEPGDSWVARAKRLGEVTGSLADDAVKE-LPE 100
>gi|254578592|ref|XP_002495282.1| ZYRO0B07656p [Zygosaccharomyces rouxii]
gi|238938172|emb|CAR26349.1| ZYRO0B07656p [Zygosaccharomyces rouxii]
Length = 102
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
RAC+ C +V+T ++F GC NC +E ++CT+P+F G+I + P +SW A+W
Sbjct: 5 RACMLCGIVQTTNEFTNDGCPNCQGI-FEEAGVSTIECTSPSFEGLIGMCKPNKSWVAKW 63
Query: 77 LRIGRFVPGCYTLAVSEALPEDLQNL 102
+ + +++PG Y + V LP ++ +L
Sbjct: 64 MSVDQYIPGMYAVKVDGRLPIEVVDL 89
>gi|281202779|gb|EFA76981.1| transcription initiation factor Spt4 [Polysphondylium pallidum
PN500]
Length = 88
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN 60
M S PT+F +AC C LVKT QF E+GCENC R TTPNF
Sbjct: 1 MSSRKTIAPTNF-KSAKACTGCGLVKTQQQFDENGCENC-----GGGRRRASTTTTPNFE 54
Query: 61 GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSE 93
G+I+V+ P SW AR + VPGCY L +++
Sbjct: 55 GVIAVLKPNESWIARKQGLDSRVPGCYALNMTD 87
>gi|406696106|gb|EKC99402.1| transcription initiation protein spt4 [Trichosporon asahii var.
asahii CBS 8904]
Length = 199
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 15 ELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWA 73
+LRACL C ++++ F + GC NC M ERVV+CT+ ++G+I++M+P SW
Sbjct: 94 QLRACLVCSILQSQKDFVDYGCPNCEEVMDMRGSAERVVECTSTIYDGMIAMMEPEESWV 153
Query: 74 ARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
ARW RI + G Y + V+ P+D+ + E Y P
Sbjct: 154 ARWQRIDKKKRGLYAVRVTGRPPQDVIDAIESRGGVYRP 192
>gi|367002596|ref|XP_003686032.1| hypothetical protein TPHA_0F01130 [Tetrapisispora phaffii CBS 4417]
gi|357524332|emb|CCE63598.1| hypothetical protein TPHA_0F01130 [Tetrapisispora phaffii CBS 4417]
Length = 103
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
RAC+ C +V+T ++F GC NC +E ++CT+P+F G++ + P++SW A+W
Sbjct: 6 RACMLCGIVQTTNEFSREGCPNCQGI-FEEAGVSSIECTSPSFEGLVGMCKPSKSWVAKW 64
Query: 77 LRIGRFVPGCYTLAVSEALPEDLQNL 102
L + ++PG Y + V LP ++ +L
Sbjct: 65 LNVDSYIPGMYAVKVDGRLPIEVVDL 90
>gi|255723311|ref|XP_002546589.1| transcription elongation factor SPT4 [Candida tropicalis MYA-3404]
gi|240130720|gb|EER30283.1| transcription elongation factor SPT4 [Candida tropicalis MYA-3404]
Length = 112
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 17 RACLRCRLVKTYDQFRESGCENCP--FFKMDEDHERVVDCTTPNFNGIISV-MDPTRSWA 73
RAC+ C +++ F + GC NC D+ +V DCT+P+F G++++ D SW
Sbjct: 7 RACMLCGIIQPMKTFIDEGCPNCESILHYQYNDNRQVQDCTSPSFEGLVALGQDNKGSWV 66
Query: 74 ARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
ARWLRI F PG Y + V+ LP + ED V Y P
Sbjct: 67 ARWLRIESFQPGLYAVKVNGKLPPAIVQELEDSNVIYRP 105
>gi|255714020|ref|XP_002553292.1| KLTH0D13398p [Lachancea thermotolerans]
gi|238934672|emb|CAR22854.1| KLTH0D13398p [Lachancea thermotolerans CBS 6340]
Length = 101
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
RAC+ C +V+T +F + GC NC DE ++CT+P+F G++ + P++SW A+W
Sbjct: 4 RACMLCGIVQTTAEFTKDGCPNCQGV-FDEAGVSSMECTSPSFEGLVGMCKPSKSWVAKW 62
Query: 77 LRIGRFVPGCYTLAVSEALPEDLQNL 102
+ + +++PG Y + V LP ++ +L
Sbjct: 63 ISVDQYIPGMYAIKVDGRLPVEVFDL 88
>gi|126132836|ref|XP_001382943.1| hypothetical protein PICST_40336 [Scheffersomyces stipitis CBS
6054]
gi|126094768|gb|ABN64914.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 112
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHE--RVVDCTTPNFNGIISV-MDPTRSWA 73
RAC+ C +V+ +F + GC NC +D+E +V DCT+P+F G++++ D SW
Sbjct: 7 RACMLCGIVQPMKRFVDYGCPNCESLLHFQDNEEGQVQDCTSPSFEGLVALGQDNRNSWV 66
Query: 74 ARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
ARWLRI F PG Y + V+ LP + + E + V Y P
Sbjct: 67 ARWLRIDSFNPGLYAVKVNGKLPPHIISDLEAQDVIYRP 105
>gi|401884062|gb|EJT48239.1| transcription initiation protein spt4 [Trichosporon asahii var.
asahii CBS 2479]
Length = 115
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 15 ELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWA 73
+LRACL C ++++ F + GC NC M ERVV+CT+ ++G+I++M+P SW
Sbjct: 10 QLRACLVCSILQSQKDFVDYGCPNCEEVMDMRGSAERVVECTSTIYDGMIAMMEPEESWV 69
Query: 74 ARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
ARW RI + G Y + V+ P+D+ + E Y P
Sbjct: 70 ARWQRIDKKKRGLYAVRVTGRPPQDVIDAIESRGGVYRP 108
>gi|66809189|ref|XP_638317.1| transcription initiation factor Spt4 [Dictyostelium discoideum
AX4]
gi|60466761|gb|EAL64810.1| transcription initiation factor Spt4 [Dictyostelium discoideum
AX4]
Length = 91
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 10/90 (11%)
Query: 2 GSAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNG 61
G + +P+SF H RAC C LVK+ QF ++GCENC TT NF G
Sbjct: 6 GRDESIVPSSFKH-ARACTECGLVKSAQQFEDNGCENCSSSSSS---------TTQNFEG 55
Query: 62 IISVMDPTRSWAARWLRIGRFVPGCYTLAV 91
II++M+P SW AR L+ R VPG Y L++
Sbjct: 56 IIAIMNPKESWIARRLQFERRVPGLYALSM 85
>gi|327350996|gb|EGE79853.1| transcription elongation factor spt4 [Ajellomyces dermatitidis ATCC
18188]
Length = 110
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGIISVM 66
+PT LRAC+ C +V+ + +F GC NC + + E++ CT+ F G+I++
Sbjct: 6 VPTGQQRSLRACMVCSIVQVHSKFMREGCPNCDHILGLAGNGEKIQQCTSQVFEGLITLA 65
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNL 102
D SW ARW R+ +V G Y + V+ + D+ ++
Sbjct: 66 DQRASWVARWQRLEGYVSGTYAVKVTGTVSRDVNHI 101
>gi|449300710|gb|EMC96722.1| hypothetical protein BAUCODRAFT_34113 [Baudoinia compniacensis
UAMH 10762]
Length = 92
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 11 SFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPT 69
S LRAC+ C +V +F GC NC F ++ + ++DCT+P F G+I++ DP
Sbjct: 2 SSSRSLRACMVCSIVLPQAKFNREGCPNCEGFLELRGSSDAIMDCTSPVFEGLITLADPE 61
Query: 70 RSWAARWLRIGRFVPGCYTLAV 91
SW A+W R+ +VPG Y + V
Sbjct: 62 ASWVAKWQRLQGYVPGTYAVKV 83
>gi|156839293|ref|XP_001643339.1| hypothetical protein Kpol_472p12 [Vanderwaltozyma polyspora DSM
70294]
gi|156113945|gb|EDO15481.1| hypothetical protein Kpol_472p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 103
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
RAC+ C +V+T ++F GC NC +E ++CT+P+F G++ + P++SW A+W
Sbjct: 6 RACMLCGIVQTTNEFSREGCPNCQGI-FEEAGVSTMECTSPSFEGLVGMCKPSKSWVAKW 64
Query: 77 LRIGRFVPGCYTLAVSEALPEDLQNL 102
L + + +PG Y + V LP ++ +L
Sbjct: 65 LNVDQNIPGMYAVKVDGRLPIEVVDL 90
>gi|443899752|dbj|GAC77081.1| hypothetical protein PANT_24d00032 [Pseudozyma antarctica T-34]
Length = 122
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 29/117 (24%)
Query: 14 HELRACLRCRLVKTYDQFRESGCENC-PFF----------------------------KM 44
+LRACLRC+ V++ F GC NC P +M
Sbjct: 6 EKLRACLRCQFVQSPRDFHLKGCPNCEPVLEVSAAMLVAPCGPGVHSTTFLLFTLCRQQM 65
Query: 45 DEDHERVVDCTTPNFNGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQN 101
+RV +CTT NF+G+IS++ P SW A+W RI + +PG Y + V LPE L++
Sbjct: 66 QGSQDRVAECTTSNFDGMISMLRPDESWVAKWQRIEKRLPGLYAVKVVGRLPEGLES 122
>gi|134083888|emb|CAK48792.1| unnamed protein product [Aspergillus niger]
Length = 100
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 6/93 (6%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGI 62
AP+Q T LRAC+ C LV+ + +F GC NC + +++ + +CT+ F G+
Sbjct: 6 APSQQRT-----LRACMVCSLVQLHSKFMREGCPNCDNVLGLRGNNDAIQECTSQVFEGL 60
Query: 63 ISVMDPTRSWAARWLRIGRFVPGCYTLAVSEAL 95
+++ DPT SW ARW R+ +VPG Y + V+ ++
Sbjct: 61 VTLRDPTTSWVARWQRLDSYVPGTYAVKVTGSV 93
>gi|50291981|ref|XP_448423.1| hypothetical protein [Candida glabrata CBS 138]
gi|74609036|sp|Q6FMX1.1|SPT4_CANGA RecName: Full=Transcription elongation factor SPT4; AltName:
Full=Chromatin elongation factor SPT4
gi|49527735|emb|CAG61384.1| unnamed protein product [Candida glabrata]
Length = 102
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
RAC+ C +V+T ++F GC NC +E ++CT+P+F G++ + PT+SW A+W
Sbjct: 5 RACMLCGIVQTTNEFGRVGCPNCQGI-FEEAGVSTMECTSPSFEGLVGMCKPTKSWVAKW 63
Query: 77 LRIGRFVPGCYTLAVSEALPEDLQNL 102
L + +PG Y + V LP ++ L
Sbjct: 64 LSVDANIPGMYAVKVDGRLPPEVVEL 89
>gi|302421124|ref|XP_003008392.1| transcription elongation factor spt-4 [Verticillium albo-atrum
VaMs.102]
gi|261351538|gb|EEY13966.1| transcription elongation factor spt-4 [Verticillium albo-atrum
VaMs.102]
Length = 95
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 22 CRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARWLRIG 80
C +V T +FR+ GC NC + E++ CT+ F G+I++ DP+RSW A+W R+
Sbjct: 3 CSIVMTTARFRDEGCPNCEEVLHLAGSQEQIESCTSQVFEGLITLADPSRSWVAKWQRLD 62
Query: 81 RFVPGCYTLAVSEALPEDLQNLCEDERV-QYVP 112
+V G Y VS LP++++ E+E +Y+P
Sbjct: 63 GYVKGVYATKVSGQLPDEVRMQLEEEYGRRYIP 95
>gi|330844588|ref|XP_003294202.1| hypothetical protein DICPUDRAFT_13929 [Dictyostelium purpureum]
gi|325075369|gb|EGC29265.1| hypothetical protein DICPUDRAFT_13929 [Dictyostelium purpureum]
Length = 73
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 11/84 (13%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMD 67
+P SF + RAC+ C LVKT QF E+GCENC + TT NF G+I++M+
Sbjct: 1 VPPSF-KQSRACVDCGLVKTAQQFDENGCENC----------EGTNSTTQNFEGVIAIMN 49
Query: 68 PTRSWAARWLRIGRFVPGCYTLAV 91
P +SW AR +R + VPG Y L++
Sbjct: 50 PGQSWIARRMRSEKKVPGLYALSM 73
>gi|410081114|ref|XP_003958137.1| hypothetical protein KAFR_0F04070 [Kazachstania africana CBS 2517]
gi|372464724|emb|CCF59002.1| hypothetical protein KAFR_0F04070 [Kazachstania africana CBS 2517]
Length = 102
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
RAC+ C +V+T ++F GC NC +E ++CT+P++ G++ + P++SW A+W
Sbjct: 5 RACMLCGIVQTTNEFSRDGCPNCQGI-FEEAGVSTMECTSPSYEGLVGMCKPSKSWVAKW 63
Query: 77 LRIGRFVPGCYTLAVSEALPEDLQNL 102
L + + +PG Y + V LP ++ +L
Sbjct: 64 LSVDQNIPGMYAIKVDGRLPVEVIDL 89
>gi|112362840|emb|CAL35893.1| SPT4 protein [Saccharomyces bayanus]
gi|112362842|emb|CAL35866.1| SPT4 protein [Saccharomyces bayanus]
gi|112362844|emb|CAL36073.1| SPT4 protein [Saccharomyces bayanus]
gi|112362846|emb|CAL35888.1| SPT4 protein [Saccharomyces bayanus]
Length = 102
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
RAC+ C +V+T ++F GC NC +E ++CT+P+F G++ + PT+SW A+W
Sbjct: 5 RACMLCGIVQTTNEFNREGCPNCQGI-FEEAGVSTMECTSPSFEGLVGMCKPTKSWVAKW 63
Query: 77 LRIGRFVPGCYTLAVSEALPEDLQNL 102
L + V G Y + V LP ++ L
Sbjct: 64 LSVDHNVAGMYAIKVDGRLPAEVVEL 89
>gi|68467715|ref|XP_722016.1| hypothetical protein CaO19.11429 [Candida albicans SC5314]
gi|68468034|ref|XP_721856.1| hypothetical protein CaO19.3947 [Candida albicans SC5314]
gi|74587492|sp|Q5AK73.1|SPT4_CANAL RecName: Full=Transcription elongation factor SPT4; AltName:
Full=Chromatin elongation factor SPT4
gi|46443798|gb|EAL03077.1| hypothetical protein CaO19.3947 [Candida albicans SC5314]
gi|46443963|gb|EAL03241.1| hypothetical protein CaO19.11429 [Candida albicans SC5314]
gi|238882838|gb|EEQ46476.1| transcription elongation factor SPT4 [Candida albicans WO-1]
Length = 112
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 17 RACLRCRLVKTYDQFRESGCENCP--FFKMDEDHERVVDCTTPNFNGIISVMDPTR-SWA 73
RAC+ C +++ F + GC NC D+++V DCT+P+F G++++ + + SW
Sbjct: 7 RACMLCGIIQPMKSFIDYGCPNCESLLHYQYNDNKQVQDCTSPSFEGLVALGEDNKGSWV 66
Query: 74 ARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
ARWLRI F G Y + V+ LP + E++ V Y P
Sbjct: 67 ARWLRIDSFTAGLYAVKVNGKLPPSIIAELEEQNVIYRP 105
>gi|398365457|ref|NP_011577.3| Spt4p [Saccharomyces cerevisiae S288c]
gi|417803|sp|P32914.1|SPT4_YEAST RecName: Full=Transcription elongation factor SPT4; AltName:
Full=Chromatin elongation factor SPT4
gi|295667|gb|AAA35084.1| zinc finger protein [Saccharomyces cerevisiae]
gi|1323083|emb|CAA97065.1| SPT4 [Saccharomyces cerevisiae]
gi|51013631|gb|AAT93109.1| YGR063C [Saccharomyces cerevisiae]
gi|71064049|gb|AAZ22476.1| Spt4p [Saccharomyces cerevisiae]
gi|112362848|emb|CAL35887.1| SPT4 protein [Saccharomyces cerevisiae]
gi|112362850|emb|CAL35886.1| SPT4 protein [Saccharomyces cerevisiae]
gi|112362852|emb|CAL35885.1| SPT4 protein [Saccharomyces cerevisiae]
gi|112362854|emb|CAL36074.1| SPT4 protein [Saccharomyces cerevisiae]
gi|112362856|emb|CAL35884.1| SPT4 protein [Saccharomyces cerevisiae]
gi|112362858|emb|CAL35883.1| SPT4 protein [Saccharomyces cerevisiae]
gi|112362860|emb|CAL35882.1| SPT4 protein [Saccharomyces cerevisiae]
gi|112362862|emb|CAL35881.1| SPT4 protein [Saccharomyces cerevisiae]
gi|112362864|emb|CAL35880.1| SPT4 protein [Saccharomyces cerevisiae]
gi|112362866|emb|CAL35879.1| SPT4 protein [Saccharomyces cerevisiae]
gi|112362868|emb|CAL35878.1| SPT4 protein [Saccharomyces cerevisiae]
gi|112362870|emb|CAL36075.1| SPT4 protein [Saccharomyces cerevisiae]
gi|112362872|emb|CAL35877.1| SPT4 protein [Saccharomyces cerevisiae]
gi|112362888|emb|CAL35869.1| SPT4 protein [Saccharomyces paradoxus]
gi|151943343|gb|EDN61656.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae
YJM789]
gi|190406914|gb|EDV10181.1| transcription elongation factor SPT4 [Saccharomyces cerevisiae
RM11-1a]
gi|256269084|gb|EEU04420.1| Spt4p [Saccharomyces cerevisiae JAY291]
gi|259146566|emb|CAY79823.1| Spt4p [Saccharomyces cerevisiae EC1118]
gi|285812259|tpg|DAA08159.1| TPA: Spt4p [Saccharomyces cerevisiae S288c]
gi|323304837|gb|EGA58595.1| Spt4p [Saccharomyces cerevisiae FostersB]
gi|323309031|gb|EGA62260.1| Spt4p [Saccharomyces cerevisiae FostersO]
gi|323333511|gb|EGA74905.1| Spt4p [Saccharomyces cerevisiae AWRI796]
gi|323348590|gb|EGA82834.1| Spt4p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355024|gb|EGA86855.1| Spt4p [Saccharomyces cerevisiae VL3]
gi|349578277|dbj|GAA23443.1| K7_Spt4p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765665|gb|EHN07172.1| Spt4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299318|gb|EIW10412.1| Spt4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 102
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
RAC+ C +V+T ++F GC NC +E ++CT+P+F G++ + PT+SW A+W
Sbjct: 5 RACMLCGIVQTTNEFNRDGCPNCQGI-FEEAGVSTMECTSPSFEGLVGMCKPTKSWVAKW 63
Query: 77 LRIGRFVPGCYTLAVSEALPEDLQNL 102
L + + G Y + V LP ++ L
Sbjct: 64 LSVDHSIAGMYAIKVDGRLPAEVVEL 89
>gi|112362874|emb|CAL36076.1| SPT4 protein [Saccharomyces kudriavzevii]
gi|112362876|emb|CAL35874.1| SPT4 protein [Saccharomyces kudriavzevii]
gi|112362878|emb|CAL36077.1| SPT4 protein [Saccharomyces kudriavzevii]
gi|365760651|gb|EHN02357.1| Spt4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 102
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
RAC+ C +V+T ++F GC NC +E ++CT+P+F G++ + PT+SW A+W
Sbjct: 5 RACMLCGIVQTTNEFNRDGCPNCQGI-FEEAGVSTMECTSPSFEGLVGMCKPTKSWVAKW 63
Query: 77 LRIGRFVPGCYTLAVSEALPEDLQNL 102
L + + G Y + V LP ++ L
Sbjct: 64 LSVDHNIAGMYAIKVDGRLPSEVVEL 89
>gi|401625658|gb|EJS43656.1| spt4p [Saccharomyces arboricola H-6]
Length = 102
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
RAC+ C +V+T ++F GC NC +E ++CT+P+F G++ + PT+SW A+W
Sbjct: 5 RACMLCGIVQTTNEFNREGCPNCQGI-FEEAGVSTMECTSPSFEGLVGMCKPTKSWVAKW 63
Query: 77 LRIGRFVPGCYTLAVSEALPEDLQNL 102
L + + G Y + V LP ++ L
Sbjct: 64 LSVDHNIAGMYAIKVDGRLPAEVVEL 89
>gi|119389383|pdb|2EXU|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Transcription Elongation Factors Spt4-Spt5ngn Domain
Length = 200
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
RAC+ C +V+T ++F GC NC +E ++CT+P+F G++ + PT+SW A+W
Sbjct: 5 RACMLCGIVQTTNEFNRDGCPNCQGI-FEEAGVSTMECTSPSFEGLVGMCKPTKSWVAKW 63
Query: 77 LRIGRFVPGCYTLAVSEALPEDLQNL 102
L + + G Y + V LP ++ L
Sbjct: 64 LSVDHSIAGMYAIKVDGRLPAEVVEL 89
>gi|241955999|ref|XP_002420720.1| RNA polymerase II elongation factor, putative; transcription
elongation factor, putative [Candida dubliniensis CD36]
gi|223644062|emb|CAX41805.1| RNA polymerase II elongation factor, putative [Candida dubliniensis
CD36]
Length = 112
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 17 RACLRCRLVKTYDQFRESGCENCP--FFKMDEDHERVVDCTTPNFNGIISVMDPTR-SWA 73
RAC+ C +++ F + GC NC D+++V DCT+P+F G++++ + + SW
Sbjct: 7 RACMLCGIIQPMKAFIDYGCPNCESLLHYQYNDNKQVQDCTSPSFEGLVALGEDNKGSWV 66
Query: 74 ARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
ARWLRI F G Y + V+ LP + E++ V Y P
Sbjct: 67 ARWLRIDSFTAGLYAVKVNGKLPPSIIAELEEQNVIYRP 105
>gi|112362880|emb|CAL35873.1| SPT4 protein [Saccharomyces mikatae]
gi|112362882|emb|CAL35872.1| SPT4 protein [Saccharomyces mikatae]
gi|112362884|emb|CAL35871.1| SPT4 protein [Saccharomyces mikatae]
gi|112362886|emb|CAL35870.1| SPT4 protein [Saccharomyces mikatae]
Length = 102
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
RAC+ C +V+T ++F GC NC +E ++CT+P+F G++ + PT+SW A+W
Sbjct: 5 RACMLCGIVQTTNEFNRDGCPNCQGI-FEEAGVSTMECTSPSFEGLVGMCKPTKSWVAKW 63
Query: 77 LRIGRFVPGCYTLAVSEALPEDLQNL 102
L + + G Y + V LP ++ L
Sbjct: 64 LSVDHNIAGMYAIKVDGRLPAEVVEL 89
>gi|444323605|ref|XP_004182443.1| hypothetical protein TBLA_0I02680 [Tetrapisispora blattae CBS 6284]
gi|387515490|emb|CCH62924.1| hypothetical protein TBLA_0I02680 [Tetrapisispora blattae CBS 6284]
Length = 102
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
RAC+ C +V++ ++ +GC NC +E ++CT+P+F G++ + PT+SW A+W
Sbjct: 5 RACMLCGIVQSTNEISRNGCPNCQGV-FEEAGVSAMECTSPSFEGLVGMCKPTKSWVAKW 63
Query: 77 LRIGRFVPGCYTLAVSEALPEDLQNL 102
L + + +PG Y + V LP ++ +L
Sbjct: 64 LSVDQNIPGLYAVKVDGRLPIEVVDL 89
>gi|320168463|gb|EFW45362.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 259
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 14 HELRACLRCRLVKTYDQFRESGCENCP--FFKMDEDHERVVDCTTPNFNGIISVMDPTRS 71
+L AC+ C L+K +QF +GCENC ++ D E TT NF G++++M P S
Sbjct: 155 KDLVACMICSLLKNANQFEANGCENCSQVLEELGIDQENTA-LTTKNFEGMVALMKPDVS 213
Query: 72 WAARWLRIGRFVPGCYTLAVSEALPEDL 99
W RW I +F PG Y + V + P+++
Sbjct: 214 WTGRWQSISKFQPGLYAVGVFDRPPKEV 241
>gi|112362890|emb|CAL35868.1| SPT4 protein [Saccharomyces paradoxus]
gi|112362892|emb|CAL35867.1| SPT4 protein [Saccharomyces paradoxus]
Length = 102
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
RAC+ C +V+T ++F GC NC +E ++CT+P+F G++ + P++SW A+W
Sbjct: 5 RACMLCGIVQTTNEFNRDGCPNCQGI-FEEAGVSTMECTSPSFEGLVGMCKPSKSWVAKW 63
Query: 77 LRIGRFVPGCYTLAVSEALPEDLQNL 102
L + + G Y + V LP ++ L
Sbjct: 64 LSVDHSIAGMYAIKVDGRLPAEVVEL 89
>gi|392579108|gb|EIW72235.1| hypothetical protein TREMEDRAFT_26002 [Tremella mesenterica DSM
1558]
Length = 115
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 17 RACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAAR 75
RACL C +++T ++F GC NC + + +RV +CT+ ++G+I++M P SW A+
Sbjct: 13 RACLVCGILQTPNEFLNDGCPNCEEILNLKGNADRVAECTSALYDGVIAMMQPEESWVAK 72
Query: 76 WLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
W RI + G Y + V+ P+D+ + E+ Y P
Sbjct: 73 WQRIDKKRRGLYAVRVTGRPPQDVIDAIEERGGVYRP 109
>gi|367014237|ref|XP_003681618.1| hypothetical protein TDEL_0E01640 [Torulaspora delbrueckii]
gi|359749279|emb|CCE92407.1| hypothetical protein TDEL_0E01640 [Torulaspora delbrueckii]
Length = 102
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
RAC+ C +V T + F GC NC +E ++CT+P+F G++ + P++SW A+W
Sbjct: 5 RACMLCGIVLTTNDFSNDGCPNCQGI-FEEAGVSAIECTSPSFEGLVGMCKPSKSWVAKW 63
Query: 77 LRIGRFVPGCYTLAVSEALPEDL 99
L + + +PG Y + V LP ++
Sbjct: 64 LSVDQNIPGMYAVKVDGRLPVEV 86
>gi|294659965|ref|XP_002770676.1| DEHA2G20086p [Debaryomyces hansenii CBS767]
gi|218511834|sp|Q6BHA5.2|SPT4_DEBHA RecName: Full=Transcription elongation factor SPT4; AltName:
Full=Chromatin elongation factor SPT4
gi|199434366|emb|CAR66008.1| DEHA2G20086p [Debaryomyces hansenii CBS767]
Length = 111
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 17 RACLRCRLVKTYDQFRESGCENCP---FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWA 73
RAC+ C +++ + +F + GC NC F+ +ED++ V DCT+P+F G++++ D T+S
Sbjct: 7 RACMLCGIIQPFRKFVDFGCPNCESVLHFQDNEDNQ-VQDCTSPSFEGLVALGDETKSPG 65
Query: 74 ARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
LRI FV G Y + ++ LP + D+ + Y P
Sbjct: 66 GERLRIDSFVAGLYAVKINGKLPPHIIGDLADQNISYRP 104
>gi|403215663|emb|CCK70162.1| hypothetical protein KNAG_0D04160 [Kazachstania naganishii CBS
8797]
Length = 101
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
RAC+ C +V++ ++F GC NC +E ++CT+P+F G++ + P +SW A+W
Sbjct: 4 RACMLCGIVQSTNEFNRDGCPNCQGI-FEEAGVSAMECTSPSFEGLVGMCKPRKSWVAKW 62
Query: 77 LRIGRFVPGCYTLAVSEALPEDLQNL 102
L + +PG Y + V LP ++ L
Sbjct: 63 LSVDMNIPGLYAIKVDGRLPAEVVEL 88
>gi|365986292|ref|XP_003669978.1| hypothetical protein NDAI_0D04210 [Naumovozyma dairenensis CBS 421]
gi|343768747|emb|CCD24735.1| hypothetical protein NDAI_0D04210 [Naumovozyma dairenensis CBS 421]
Length = 95
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 20 LRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARWLRI 79
+ C +V+T ++F +GC NC +E ++CT+P+F G++ + P +SW A+WL +
Sbjct: 1 MLCGIVQTTNEFNTNGCPNCQGI-FEEAGVGTMECTSPSFEGLVGMCKPGKSWVAKWLSV 59
Query: 80 GRFVPGCYTLAVSEALPEDLQNL 102
++PG Y + V LP ++ L
Sbjct: 60 DPYIPGMYAIKVDGRLPGEVVEL 82
>gi|401838671|gb|EJT42164.1| SPT4-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 95
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 20 LRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARWLRI 79
+ C +V+T ++F GC NC +E ++CT+P+F G++ + PT+SW A+WL +
Sbjct: 1 MLCGIVQTTNEFNRDGCPNCQGI-FEEAGVSTMECTSPSFEGLVGMCKPTKSWVAKWLSV 59
Query: 80 GRFVPGCYTLAVSEALPEDLQNL 102
+ G Y + V LP ++ L
Sbjct: 60 DHNIAGMYAIKVDGRLPSEVVEL 82
>gi|19113388|ref|NP_596596.1| transcription elongation factor complex subunit Spt4
[Schizosaccharomyces pombe 972h-]
gi|74625407|sp|Q9P7K8.1|SPT4_SCHPO RecName: Full=Transcription elongation factor spt4; AltName:
Full=Chromatin elongation factor spt4
gi|7106081|emb|CAB76052.1| transcription elongation factor complex subunit Spt4
[Schizosaccharomyces pombe]
Length = 105
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
RACL C +V + F GC N + + V T+P F GI+++M PT SW ARW
Sbjct: 10 RACLICGIVLPHSVFANKGCPN-------DGVDDVETFTSPVFEGIMAMMSPTESWVARW 62
Query: 77 LRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
RI F PG Y V L ED+ + Y P
Sbjct: 63 QRIDTFTPGIYATRVQGVLNEDVVESLRRRGINYRP 98
>gi|213401977|ref|XP_002171761.1| transcription elongation factor complex subunit Spt4
[Schizosaccharomyces japonicus yFS275]
gi|211999808|gb|EEB05468.1| transcription elongation factor complex subunit Spt4
[Schizosaccharomyces japonicus yFS275]
Length = 105
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
RACL C ++ Y+ F GC N + + V T+P F G+++++ PT SW ARW
Sbjct: 10 RACLVCGIILPYNTFAAKGCPN-------DGLDDVETYTSPVFEGVMAMVAPTESWVARW 62
Query: 77 LRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQYVP 112
RI F PG Y V +L +++ + + Y P
Sbjct: 63 QRIDAFTPGMYATRVQGSLSDEMIDSLRQRGIHYRP 98
>gi|119614871|gb|EAW94465.1| suppressor of Ty 4 homolog 1 (S. cerevisiae), isoform CRA_b [Homo
sapiens]
gi|119614873|gb|EAW94467.1| suppressor of Ty 4 homolog 1 (S. cerevisiae), isoform CRA_b [Homo
sapiens]
Length = 76
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 44 MDEDHERVVDCTTPNFNGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLC 103
M + E V DCT+ +F+GII++M P SW ++W R+ F PG Y ++V+ LP+ +
Sbjct: 1 MKGNREMVYDCTSSSFDGIIAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVREL 60
Query: 104 EDERVQY 110
+ V Y
Sbjct: 61 KSRGVAY 67
>gi|428178255|gb|EKX47131.1| hypothetical protein GUITHDRAFT_152167 [Guillardia theta
CCMP2712]
Length = 110
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 6 AQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISV 65
A +P +LRACL+C LV QF GC NC + D + T NF GI ++
Sbjct: 17 AAVPNDV-RQLRACLKCHLVLPARQFDRQGCANCGTRENYAD-----EYCTVNFTGISAI 70
Query: 66 MDPTRSWAARWLRIGRFVPGCYTLAV 91
P SW +RWL PGCY L V
Sbjct: 71 TQPQHSWVSRWLDKQDLKPGCYALEV 96
>gi|269859274|ref|XP_002649362.1| transcription initiation protein SPT4 [Enterocytozoon bieneusi
H348]
gi|220067125|gb|EED44592.1| transcription initiation protein SPT4 [Enterocytozoon bieneusi
H348]
Length = 100
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPN-FNGIISVMDPTRSWAAR 75
+AC+ CR++ + DQF +SGC NC +D R +C T + + G I ++ +SW AR
Sbjct: 12 KACVNCRILLSKDQFIKSGCPNCS--SIDNTDGRNYECNTSSYYKGQIIYLNTKKSWIAR 69
Query: 76 WLRIGRFVPGCYTLAVSEALPEDL 99
W + + G Y ++V++ L +DL
Sbjct: 70 WQKNTECINGFYAISVNDELTDDL 93
>gi|403362791|gb|EJY81130.1| Transcription initiation factor Spt4 [Oxytricha trifallax]
Length = 107
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 17 RACLRCRLVKTYDQFRESG-CENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAAR 75
+AC C L+ T Q++E+G C NC DE H TT +F G++++M P SW A+
Sbjct: 22 QACTGCGLILTSSQWKENGSCPNCK----DEAHLE----TTNDFGGVVALMHPKESWVAK 73
Query: 76 WLRIGRFVPGCYTLAVSEA---LPEDLQNLCEDE 106
W +FVPG Y + E PE+ + +DE
Sbjct: 74 WNNFTKFVPGLYAIQFQEHNQYNPENEYEMNDDE 107
>gi|403372650|gb|EJY86225.1| Transcription elongation factor SPT4 [Oxytricha trifallax]
Length = 143
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 8/85 (9%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRE-SGCENCPFFKMDEDHERVVDCTTPNFNGIISVM 66
+P+S ++LRAC+ C+LV +++ + C NCP + +D TT N+ +IS++
Sbjct: 62 LPSSM-NKLRACIYCKLVLNQEKWSKLKQCPNCP------ESSASLDETTDNYESLISLV 114
Query: 67 DPTRSWAARWLRIGRFVPGCYTLAV 91
P +SW A+W ++ +PG Y +AV
Sbjct: 115 LPLKSWVAQWQQMRNCIPGIYAMAV 139
>gi|406607901|emb|CCH40749.1| Transcription elongation factor [Wickerhamomyces ciferrii]
Length = 96
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 30 QFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARWLRIGRFVPGCYTL 89
+F++ GC NC + + + T+P F G++++ +P +SW A+WLR+ ++PG Y +
Sbjct: 16 RFQDEGCPNCV-----DLLDVGLSTTSPTFEGLVAIGEPDKSWVAKWLRVNTYLPGLYAV 70
Query: 90 AVSEALPEDL 99
V LP+D+
Sbjct: 71 KVMGRLPQDI 80
>gi|384483844|gb|EIE76024.1| hypothetical protein RO3G_00728 [Rhizopus delemar RA 99-880]
Length = 76
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 44 MDEDHERVVDCTTPNFNGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLC 103
M +RV++CT+ F G I++M+P SW RW RI +F G Y + V +PED+++
Sbjct: 1 MRGSMDRVMECTSSKFEGCIAMMNPKESWVGRWQRIDKFTRGIYAIRVYGRIPEDVEDDL 60
Query: 104 EDERVQYVP 112
+ Y P
Sbjct: 61 ARRGIPYRP 69
>gi|149053788|gb|EDM05605.1| rCG33054, isoform CRA_b [Rattus norvegicus]
Length = 89
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNG 61
A +P H LRACL C LVKT DQF GC+NC + +M + E V DCT+ +F+G
Sbjct: 2 ALETVPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDG 59
>gi|148683881|gb|EDL15828.1| mCG7669, isoform CRA_a [Mus musculus]
Length = 87
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LVKT DQF GC+NC + +M + E V DCT+ +F+G
Sbjct: 2 ALETVPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGC 60
Query: 63 IS 64
++
Sbjct: 61 LA 62
>gi|149053787|gb|EDM05604.1| rCG33054, isoform CRA_a [Rattus norvegicus]
Length = 81
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNGI 62
A +P H LRACL C LVKT DQF GC+NC + +M + E V DCT+ +F+G
Sbjct: 2 ALETVPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGH 60
Query: 63 ISVM 66
+M
Sbjct: 61 SRLM 64
>gi|148683882|gb|EDL15829.1| mCG7669, isoform CRA_b [Mus musculus]
Length = 104
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNG 61
+P H LRACL C LVKT DQF GC+NC + +M + E V DCT+ +F+G
Sbjct: 6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDG 59
>gi|307189969|gb|EFN74205.1| Transcription elongation factor SPT4 [Camponotus floridanus]
Length = 59
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 16 LRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNG 61
LRACL C LVKT++QF GC+NC F +M + + V DCT+ NF+G
Sbjct: 13 LRACLVCSLVKTFEQFEFDGCDNCDEFLRMKNNKDNVFDCTSSNFDG 59
>gi|413944107|gb|AFW76756.1| putative bZIP transcription factor superfamily protein [Zea mays]
Length = 70
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 29/34 (85%)
Query: 26 KTYDQFRESGCENCPFFKMDEDHERVVDCTTPNF 59
+ +D+FR++GCEN PF +MD +H+ +++CTTPNF
Sbjct: 35 QVFDRFRQNGCENYPFLEMDREHDNIINCTTPNF 68
>gi|407035181|gb|EKE37583.1| transcription initiation protein SPT4, putative [Entamoeba nuttalli
P19]
Length = 128
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
IP++F + LR C C L+K+ +QF+ GC+NC +F ED+ + NF G++S++
Sbjct: 26 IPSNF-NSLRCCKICGLIKSQEQFQRDGCDNCKRYFDNWEDY------VSSNFTGMLSLL 78
Query: 67 DPTRSWAARWLRI-GRFVPGCYTLAVSEALPEDLQNLCEDERVQ 109
P RS+ + L + +V G Y + +++ ++++ +Q
Sbjct: 79 RPDRSFIGKVLGMKDTYVCGLYAASCEDSVSPEIESTAAVNDIQ 122
>gi|67484570|ref|XP_657505.1| transcription initiation protein SPT4 [Entamoeba histolytica
HM-1:IMSS]
gi|56474758|gb|EAL52115.1| transcription initiation protein SPT4, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449702144|gb|EMD42838.1| transcription initiation protein SPT4, putative [Entamoeba
histolytica KU27]
Length = 128
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
IP++F + LR C C L+K+ +QF+ GC+NC +F ED+ + NF G++S++
Sbjct: 26 IPSNF-NTLRCCKICGLIKSQEQFQRDGCDNCKRYFDNWEDY------VSSNFTGMLSLL 78
Query: 67 DPTRSWAARWLRI-GRFVPGCYTLAVSEALPEDLQNLCEDERVQ 109
P RS+ + L + +V G Y + +++ ++++ +Q
Sbjct: 79 RPDRSFIGKVLGMKDTYVCGLYAASCEDSVSPEIESTATVNDIQ 122
>gi|414590936|tpg|DAA41507.1| TPA: hypothetical protein ZEAMMB73_313685 [Zea mays]
Length = 73
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/30 (80%), Positives = 25/30 (83%)
Query: 6 AQIPTSFGHELRACLRCRLVKTYDQFRESG 35
A+IPTSFG ELRACLRCRLVKTYDQ G
Sbjct: 19 AEIPTSFGPELRACLRCRLVKTYDQVPSCG 48
>gi|413943870|gb|AFW76519.1| hypothetical protein ZEAMMB73_606321 [Zea mays]
Length = 253
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 18 ACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN 60
AC+RC ++ D ++GCEN PF +MD +H+ +V+CTTP+F
Sbjct: 120 ACVRCLVLSVLDS-GQNGCENYPFLEMDREHDDIVNCTTPSFT 161
>gi|167389203|ref|XP_001738860.1| suppressor of ty [Entamoeba dispar SAW760]
gi|165897688|gb|EDR24770.1| suppressor of ty, putative [Entamoeba dispar SAW760]
Length = 179
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCP-FFKMDEDHERVVDCTTPNFNGIISVM 66
IP++F + LR C C L+K+ +QF+ GC+NC +F ED+ + NF G++S++
Sbjct: 77 IPSNF-NTLRCCKICGLIKSQEQFQRDGCDNCKRYFDNWEDY------VSSNFTGMLSLL 129
Query: 67 DPTRSWAARWLRI-GRFVPGCYTLAVSEALPEDLQNLCEDERVQ 109
P RS+ + L + +V G Y + +++ ++++ +Q
Sbjct: 130 RPDRSFIGKVLGMKDTYVCGLYAASCEDSVSPEIESTAAVNDIQ 173
>gi|123417536|ref|XP_001305133.1| transcription initiation protein [Trichomonas vaginalis G3]
gi|121886633|gb|EAX92203.1| transcription initiation protein, putative [Trichomonas vaginalis
G3]
Length = 123
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 16 LRACLRCRLVKTYDQFR-ESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAA 74
+ AC+ C L++ D ++ E+ C NC + + D + +FNGI+++ P +SW +
Sbjct: 16 MAACIGCGLIQDRDVWKHETTCPNCGWTATEID-----SWVSNSFNGILALFQPQKSWCS 70
Query: 75 RWLRIGRFVPGCYTL 89
WL+ + VPG Y +
Sbjct: 71 SWLKYNKNVPGIYCI 85
>gi|115438088|ref|XP_001217976.1| hypothetical protein ATEG_09354 [Aspergillus terreus NIH2624]
gi|114188791|gb|EAU30491.1| hypothetical protein ATEG_09354 [Aspergillus terreus NIH2624]
Length = 70
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 35 GCENCP-FFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSE 93
GC NC +++ + + T+ F G+I++ DP SW ARW R+ +VPG Y + V+
Sbjct: 4 GCPNCDNVLNFRGNNDAIQEGTSQVFEGLITLRDPATSWVARWQRLDSYVPGTYAVKVTG 63
Query: 94 AL 95
++
Sbjct: 64 SV 65
>gi|413924552|gb|AFW64484.1| hypothetical protein ZEAMMB73_128588 [Zea mays]
Length = 473
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 31 FRESGCENCPFFKMDEDHERVVDCTTPNF 59
FR++G EN PF +MD +H+ +V+CTTPNF
Sbjct: 321 FRQNGYENYPFLEMDREHDNIVNCTTPNF 349
>gi|402891849|ref|XP_003909145.1| PREDICTED: transcription elongation factor SPT4-like [Papio
anubis]
Length = 69
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 51 VVDCTTPNFNGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDL 99
V D T+ +F+ II +M P SW ++W R+ F PG Y ++V+ LP+ +
Sbjct: 2 VYDSTSSSFDEIIVMMSPEDSWVSKWQRVSNFKPGIYAVSVTGCLPQGI 50
>gi|261331772|emb|CBH14766.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 254
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 5 PAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIIS 64
P Q+P H AC RCRL+ T QF GC+ C + E ++D T F+ I
Sbjct: 110 PPQLPVG-DHGYLACRRCRLIITEQQFLHEGCQVCGTGPV--SREELLDVATAEFSNFIG 166
Query: 65 VMDPTRSWAARWLR 78
++ P +SW R +
Sbjct: 167 LIAPEKSWVGRLIN 180
>gi|71745878|ref|XP_827569.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831734|gb|EAN77239.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 271
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 5 PAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIIS 64
P Q+P H AC RCRL+ T QF GC+ C + E ++D T F+ I
Sbjct: 127 PPQLPVG-DHGYLACRRCRLIITEQQFLHEGCQVCGTGPV--SREELLDVATAEFSNFIG 183
Query: 65 VMDPTRSWAARWLR 78
++ P +SW R +
Sbjct: 184 LIAPEKSWVGRLIN 197
>gi|146173281|ref|XP_001471396.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|146144872|gb|EDK31595.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 125
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 9 PTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDP 68
P F +L AC C + T +Q+R+ +NCP + ++ + T F GI + DP
Sbjct: 33 PNDFKRKLLACTNCYFILTQEQWRDY--QNCPNCDVSSNNPK----PTAKFTGITCITDP 86
Query: 69 TRSWAARWLRIGR----FVPGCYTLAVSE 93
+SW +RI + VPG Y + ++E
Sbjct: 87 AKSWQTNRMRIVKRKDVKVPGAYAVNINE 115
>gi|414590935|tpg|DAA41506.1| TPA: hypothetical protein ZEAMMB73_313685 [Zea mays]
Length = 102
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 24/29 (82%)
Query: 62 IISVMDPTRSWAARWLRIGRFVPGCYTLA 90
IIS+MDP+RSWAARWLRIG F+ + L+
Sbjct: 33 IISLMDPSRSWAARWLRIGSFLGAIHLLS 61
>gi|414870016|tpg|DAA48573.1| TPA: hypothetical protein ZEAMMB73_864700 [Zea mays]
Length = 237
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 31 FRESGCENCPFFKMDEDHERVVDCTTPNFNG 61
FR++ CEN PF +MD +H+ +V+CT PNF
Sbjct: 169 FRQNRCENYPFLEMDREHDNIVNCTAPNFTS 199
>gi|440299606|gb|ELP92158.1| transcription elongation factor SPT4, putative [Entamoeba invadens
IP1]
Length = 128
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 8 IPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMD 67
IP +F +LR C C L+K+ QF CENC M+ D D + F+G+ +++
Sbjct: 26 IPDNF-DKLRCCKICGLIKSEGQFESHKCENCRRM-MEYDK----DFYSAKFSGMTALLR 79
Query: 68 PTRSWAARWLRIGR-FVPGCYTLAVSEALPEDLQNLCEDERVQYV 111
P RS+ ++ + +V G Y + +P +++ L + VQ +
Sbjct: 80 PDRSYISKVKGMREDYVVGLYATSCEGTVPPEIERLAAENGVQIL 124
>gi|149053790|gb|EDM05607.1| rCG33054, isoform CRA_d [Rattus norvegicus]
Length = 89
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 55 TTPNFNGIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
++ + + II++M P SW ++W R+ F PG Y ++V+ LP+ + + V Y
Sbjct: 25 SSSSLSRIIAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 80
>gi|449276520|gb|EMC84992.1| Transcription elongation factor SPT4, partial [Columba livia]
Length = 58
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 62 IISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVQY 110
II++M P SW ++W RI F PG Y ++V+ LP+ + + V Y
Sbjct: 1 IIAMMSPEDSWVSKWQRISNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 49
>gi|71416110|ref|XP_810098.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70874580|gb|EAN88247.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 218
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 5 PAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIIS 64
P Q+P L AC +CRL+ T QF GC C + D + D TT +F+ +
Sbjct: 69 PPQLPIGDRGYL-ACRQCRLILTETQFIRDGCSVCGTGPVSRD--ELHDVTTADFSNFVG 125
Query: 65 VMDPTRSWAARWLRIGR 81
++ P +SW AR IGR
Sbjct: 126 LIAPEKSWVARM--IGR 140
>gi|71649066|ref|XP_813291.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70878161|gb|EAN91440.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 218
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 5 PAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIIS 64
P Q+P L AC +CRL+ T QF GC C + D + D TT +F+ +
Sbjct: 69 PPQLPIGDRGYL-ACRQCRLILTETQFIRDGCSVCGTGPVSRD--ELHDVTTADFSNFVG 125
Query: 65 VMDPTRSWAARWLRIGR 81
++ P +SW AR IGR
Sbjct: 126 LIAPEKSWVARM--IGR 140
>gi|440493710|gb|ELQ76146.1| Transcription elongation factor SPT4 [Trachipleistophora hominis]
Length = 105
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 17 RACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARW 76
+AC+ C + + ++ GC+NC + + T+ N+ G+I V+ W +W
Sbjct: 14 KACMLCSALIPVQELKKEGCKNC----------KNANSTSYNYKGLIGVLKKG-GWVEKW 62
Query: 77 LRIGRFVPGCYTLAV 91
RI + G Y + V
Sbjct: 63 QRIDEYGEGLYAMTV 77
>gi|342183681|emb|CCC93161.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 208
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGII 63
P Q+P L AC +CRL+ T QF GC C + E + D T F+ I
Sbjct: 75 VPPQLPIGDRGYL-ACRQCRLIITEQQFLRDGCSICGTGPV--SREELPDVATAEFSNFI 131
Query: 64 SVMDPTRSWAARWLR 78
++ P +SW R ++
Sbjct: 132 GLIAPEKSWVGRLIQ 146
>gi|429327697|gb|AFZ79457.1| hypothetical protein BEWA_023050 [Babesia equi]
Length = 38
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 66 MDPTRSWAARWLRIGRFVPGCYTLAVSEALPE 97
M+P +SW+AR+ +G +PGCY ++V+ PE
Sbjct: 1 MEPQKSWSARYNNLGDVIPGCYAISVTGVFPE 32
>gi|340056515|emb|CCC50848.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 149
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 5 PAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIIS 64
P Q+P L AC +CRLV T QF GC C + + + D TT F +
Sbjct: 8 PPQLPVGERGYL-ACRQCRLVLTEKQFLLEGCGVCGTGPV--SRQELPDVTTAEFANFVG 64
Query: 65 VMDPTRSWAARWL 77
++ P +SW AR +
Sbjct: 65 LIAPEKSWIARLI 77
>gi|429964995|gb|ELA46992.1| hypothetical protein VCUG_01523 [Vavraia culicis 'floridensis']
Length = 105
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 15/95 (15%)
Query: 18 ACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWAARWL 77
AC+ C + + ++ GC+NC + + T+ ++ G+I V+ W +W
Sbjct: 15 ACMLCSALIPIQELKKEGCKNC----------KNANSTSYSYKGLIGVLKKG-GWVEKWQ 63
Query: 78 RIGRFVPGCYTLAVSEALPEDLQNLC--EDERVQY 110
RI + G Y + V E P D +++C EDE Y
Sbjct: 64 RIDEYGEGLYAMTV-EGDP-DEEDVCAIEDEGRAY 96
>gi|401429508|ref|XP_003879236.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495486|emb|CBZ30791.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 152
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGII 63
AP Q+P S G R++ Q+ +GC C D + ++D TP+F+ I
Sbjct: 18 APPQLPLSDGRCYACRRCRRILSEV-QWYATGCVECSATMGVPDRDSLLDFATPHFHNFI 76
Query: 64 SVMDPTRSWAARWLRIGR 81
++ P +SW AR + R
Sbjct: 77 GLIAPGQSWVARLIMKSR 94
>gi|389594821|ref|XP_003722633.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|323363861|emb|CBZ12867.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 152
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGII 63
AP Q+P + G R++ Q+ +GC C D + ++D TP+F+ I
Sbjct: 18 APPQLPLTDGRCYACRRCRRILSEV-QWYATGCVECSATMGVPDRDSLLDFATPHFHNFI 76
Query: 64 SVMDPTRSWAARWLRIGR 81
++ P +SW AR + R
Sbjct: 77 GLIAPGQSWVARLIMKSR 94
>gi|154344803|ref|XP_001568343.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065680|emb|CAM43451.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 152
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 4 APAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGII 63
AP Q+P + G R++ Q+ +GC C D + ++D TP+F+ I
Sbjct: 18 APPQLPLTDGRYYACRRCRRILSEA-QWYATGCVECSAAMGIPDRDNLLDFATPHFHNFI 76
Query: 64 SVMDPTRSWAARWLRIGR 81
++ P +SW AR + R
Sbjct: 77 GLIAPGQSWVARLIMKNR 94
>gi|88857428|ref|ZP_01132071.1| hypothetical protein PTD2_02671 [Pseudoalteromonas tunicata D2]
gi|88820625|gb|EAR30437.1| hypothetical protein PTD2_02671 [Pseudoalteromonas tunicata D2]
Length = 966
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 11/82 (13%)
Query: 15 ELRAC--LRCRLVK--------TYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIIS 64
EL C RC+L K TY QF + C F K + H V CT N +++
Sbjct: 761 ELTQCSFTRCQLPKLNFIELQLTYTQFNQCDLSECNFIKPNLTHSAFVACTFKGTNFVMA 820
Query: 65 VMDPTRSWAARWLRIGRFVPGC 86
+ P S+ L RFV GC
Sbjct: 821 QL-PHVSFKQSKLENARFVGGC 841
>gi|281347971|gb|EFB23555.1| hypothetical protein PANDA_019623 [Ailuropoda melanoleuca]
Length = 42
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 26 KTYDQFRESGCENC-PFFKMDEDHERVVDCTTPNFNG 61
+T DQF GC+NC + +M + E V DCT+ +F+G
Sbjct: 6 QTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDG 42
>gi|352681822|ref|YP_004892346.1| transcription elongation factor Spt4/RpoE2, zinc finger protein
[Thermoproteus tenax Kra 1]
gi|350274621|emb|CCC81266.1| Transcription elongation factor Spt4/RpoE2, zinc finger protein
[Thermoproteus tenax Kra 1]
Length = 73
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 23 RLVKTYDQFRESGCENCPFFKMDEDHERVVDCT----TPNFNGIISVMDPTRSWAARWLR 78
R KT ++ C+NC + ED + +C T N+ G+I+V+DP +S A+ R
Sbjct: 3 RAKKTLSGYK--ACKNCKLI-IPEDATQCPNCGSTEFTNNWRGMIAVIDPEKSCIAK--R 57
Query: 79 IGRFVPGCYTLAVSE 93
+G PG Y L + E
Sbjct: 58 LGITKPGVYALELVE 72
>gi|146101249|ref|XP_001469068.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134073437|emb|CAM72167.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 152
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 7 QIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVM 66
Q+P S G R++ Q+ +GC C D + ++D TP+F+ I ++
Sbjct: 21 QLPLSDGRCYACRRCRRILSEV-QWYATGCVECSATMGVPDRDSLLDFATPHFHNFIGLI 79
Query: 67 DPTRSWAARWLRIGR 81
P +SW AR + R
Sbjct: 80 APGQSWVARLIMKSR 94
>gi|398023323|ref|XP_003864823.1| hypothetical protein, conserved [Leishmania donovani]
gi|322503059|emb|CBZ38143.1| hypothetical protein, conserved [Leishmania donovani]
Length = 152
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 7 QIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGIISVM 66
Q+P S G R++ Q+ +GC C D + ++D TP+F+ I ++
Sbjct: 21 QLPLSDGRCYACRRCRRILSEV-QWYATGCVVCSATMGVPDRDSLLDFATPHFHNFIGLI 79
Query: 67 DPTRSWAARWLRIGR 81
P +SW AR + R
Sbjct: 80 APGQSWVARLIMKSR 94
>gi|145544821|ref|XP_001458095.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425914|emb|CAK90698.1| unnamed protein product [Paramecium tetraurelia]
Length = 93
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 13/79 (16%)
Query: 15 ELRACLRCRLVKTYDQF-RESGCENCPFFKMDEDHERVVDCTTPNFNGIISVMDPTRSWA 73
+L+AC +C +V T +Q+ RE C N T F+G+I V+ P++SW
Sbjct: 23 DLKACQQCGMVLTVEQWNREVECPN-----------SCNASQTKLFSGMICVLKPSQSWV 71
Query: 74 ARWLRIGRFV-PGCYTLAV 91
R L + + PG Y + V
Sbjct: 72 IRKLGNPKSIHPGLYAIDV 90
>gi|145474347|ref|XP_001423196.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124390256|emb|CAK55798.1| unnamed protein product [Paramecium tetraurelia]
Length = 87
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 35 GCENCPFFKMDEDHERVVDC-------TTPNFNGIISVMDPTRSWAARWLRIGRFV-PGC 86
C+ C E R V+C T F+G+I V+ P++SW R L R + PG
Sbjct: 20 ACQQCGVILTVEQWNRAVECPNSCNASQTKLFSGMICVLKPSQSWVMRKLGNPRSIHPGL 79
Query: 87 YTLAV 91
Y + V
Sbjct: 80 YAIDV 84
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.139 0.460
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,995,644,261
Number of Sequences: 23463169
Number of extensions: 72215850
Number of successful extensions: 168971
Number of sequences better than 100.0: 365
Number of HSP's better than 100.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 168338
Number of HSP's gapped (non-prelim): 370
length of query: 115
length of database: 8,064,228,071
effective HSP length: 82
effective length of query: 33
effective length of database: 6,140,248,213
effective search space: 202628191029
effective search space used: 202628191029
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 69 (31.2 bits)