Query 046531
Match_columns 196
No_of_seqs 234 out of 1913
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 23:05:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046531.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046531hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 2.8E-35 9.6E-40 253.1 12.6 167 29-196 3-182 (356)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 9.2E-29 3.2E-33 209.0 9.3 130 65-196 4-144 (312)
3 1w9y_A 1-aminocyclopropane-1-c 99.9 3.1E-28 1E-32 206.5 8.1 123 66-196 2-127 (319)
4 1dcs_A Deacetoxycephalosporin 99.9 4E-28 1.4E-32 205.1 7.5 123 66-196 3-132 (311)
5 3on7_A Oxidoreductase, iron/as 99.9 7E-27 2.4E-31 194.8 10.5 115 66-196 2-119 (280)
6 1odm_A Isopenicillin N synthas 99.9 1E-25 3.5E-30 191.8 11.0 122 65-196 6-155 (331)
7 4ay7_A Methylcobalamin\: coenz 68.8 9.6 0.00033 31.4 6.1 43 80-122 302-348 (348)
8 1m5a_B Insulin B chain; alpha 64.9 6.1 0.00021 21.0 2.6 19 82-100 9-27 (30)
9 2opi_A L-fuculose-1-phosphate 59.9 3.1 0.00011 32.1 1.3 36 67-105 125-160 (212)
10 2fk5_A Fuculose-1-phosphate al 59.0 5.2 0.00018 30.6 2.4 36 67-105 117-153 (200)
11 2dbn_A Hypothetical protein YB 58.3 4.4 0.00015 35.3 2.0 57 63-123 96-152 (461)
12 2irp_A Putative aldolase class 54.9 7.8 0.00027 29.6 2.8 36 66-105 138-176 (208)
13 1e4c_P L-fuculose 1-phosphate 53.9 4.5 0.00015 31.3 1.3 37 66-105 121-157 (215)
14 1pvt_A Sugar-phosphate aldolas 49.5 6.5 0.00022 30.8 1.6 37 66-105 160-196 (238)
15 2v9l_A Rhamnulose-1-phosphate 48.0 6.7 0.00023 31.6 1.5 36 67-105 179-214 (274)
16 1otj_A Alpha-ketoglutarate-dep 38.3 40 0.0014 26.6 4.7 52 65-122 15-66 (283)
17 3ocr_A Class II aldolase/adduc 37.9 13 0.00044 30.0 1.6 37 67-105 156-192 (273)
18 3o2g_A Gamma-butyrobetaine dio 36.9 16 0.00054 30.8 2.2 52 67-123 122-173 (388)
19 2j01_J 50S ribosomal protein L 34.6 89 0.0031 23.0 5.9 39 81-119 6-46 (173)
20 4f21_A Carboxylesterase/phosph 33.7 78 0.0027 24.3 5.7 42 82-123 199-246 (246)
21 1oih_A Putative alkylsulfatase 33.0 55 0.0019 26.0 4.8 53 65-123 25-78 (301)
22 1zav_A 50S ribosomal protein L 32.2 88 0.003 23.2 5.5 40 81-120 8-48 (180)
23 2csf_A DNA-binding protein SAT 30.1 61 0.0021 22.0 3.7 26 107-133 67-92 (101)
24 2do1_A Nuclear protein HCC-1; 30.0 66 0.0023 19.3 3.6 39 70-118 7-45 (55)
25 3m4r_A Uncharacterized protein 29.4 18 0.00061 28.1 1.2 34 68-105 156-190 (222)
26 4f3y_A DHPR, dihydrodipicolina 28.8 31 0.0011 27.6 2.5 40 83-122 110-149 (272)
27 3qy9_A DHPR, dihydrodipicolina 28.1 33 0.0011 27.0 2.5 41 82-122 88-128 (243)
28 3ijp_A DHPR, dihydrodipicolina 27.9 40 0.0014 27.3 3.0 39 84-122 126-164 (288)
29 3jsy_A Acidic ribosomal protei 27.4 99 0.0034 23.7 5.1 39 81-119 5-44 (213)
30 3r1j_A Alpha-ketoglutarate-dep 26.2 95 0.0032 25.0 5.1 53 65-123 19-72 (301)
31 3pvj_A Alpha-ketoglutarate-dep 22.9 91 0.0031 24.7 4.3 53 65-123 13-65 (277)
32 2rdq_A 1-deoxypentalenic acid 22.7 1.1E+02 0.0037 23.8 4.7 36 86-122 22-57 (288)
33 3dd7_B PHD, prevent HOST death 22.4 82 0.0028 15.5 2.7 20 177-196 4-23 (23)
34 1zei_A Insulin, B28Asp-X-MCR; 20.5 78 0.0027 18.8 2.6 19 82-100 9-27 (53)
35 2wfu_B Probable insulin-like p 20.3 32 0.0011 17.5 0.6 15 82-97 8-22 (26)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=2.8e-35 Score=253.13 Aligned_cols=167 Identities=26% Similarity=0.454 Sum_probs=132.8
Q ss_pred ccccHHHHHHCCCCCCCCcccCCCCCchhhhc---cC--CCCCCcceeeCCCCCC-C--cHHHHHHHHHHHHHHcCceEE
Q 046531 29 TKAGVKGLVDAGIVNIPRIFIRPPEELVEELT---SH--QTNFQVPVIDLDGVRG-N--KLEEIVDQVRAAAETWGFFQV 100 (196)
Q Consensus 29 ~~~~v~~l~~~g~~~vP~~yv~p~~~~~~~~~---~~--~~~~~IPvIDls~~~~-~--~~~~~~~~l~~Ac~~~GFF~v 100 (196)
.+++||+|+++|+.+||++|++|+++++.... .. ....+||||||+.+.+ + .|.+++++|++||++||||||
T Consensus 3 ~~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v 82 (356)
T 1gp6_A 3 AVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHL 82 (356)
T ss_dssp CCCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred CcccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEE
Confidence 35689999999999999999999877664211 00 0124699999999864 3 467899999999999999999
Q ss_pred eecCCCHHHHHHHHHHHHHHhcCCHHHHhhhhhcCC-CCcccccCCCCcccccCcChhhhhccccccCCC-CCCCCCc--
Q 046531 101 VNHGIPLNVLEEMIEGIRKFNEQDVELKKEFYTRDR-TRNVRFNSNFDLHYSRTANWRDTLTISALASTD-LDPNEYP-- 176 (196)
Q Consensus 101 ~nHGI~~~li~~~~~~~~~FF~LP~eeK~~~~~~~~-~~~~GY~~~~~~~~~~~~d~~E~f~~~~~~p~~-~~~~~~P-- 176 (196)
+||||+.++++++++.+++||+||.|+|+++..... ....||+........+..||+|+|+++ ..|.. ..++.||
T Consensus 83 ~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~-~~p~~~~~~~~wP~~ 161 (356)
T 1gp6_A 83 INHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHL-AYPEEKRDLSIWPKT 161 (356)
T ss_dssp ESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEE-EESGGGCCGGGSCCS
T ss_pred eCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeee-cCCccccccccCCCc
Confidence 999999999999999999999999999999864432 346799876554456678999999988 55531 1123344
Q ss_pred -hHHHHHHHHHHHHHHHhhhC
Q 046531 177 -EVCRDAVREYIKNVTKLAET 196 (196)
Q Consensus 177 -~~fr~~~~~Y~~~~~~La~r 196 (196)
++||+++++|+++|.+|+.+
T Consensus 162 ~~~fr~~~~~y~~~~~~l~~~ 182 (356)
T 1gp6_A 162 PSDYIEATSEYAKCLRLLATK 182 (356)
T ss_dssp STTHHHHHHHHHHHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHHHHH
Confidence 58999999999999999863
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=99.95 E-value=9.2e-29 Score=209.05 Aligned_cols=130 Identities=9% Similarity=0.136 Sum_probs=102.6
Q ss_pred CCCcceeeCCCCCCCcHHHHHHHHHHHHHHcCceEEeecCCCHHHHHHHHHHHHHHhcCCHHHHhhhhhcCCCCcccccC
Q 046531 65 NFQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKEFYTRDRTRNVRFNS 144 (196)
Q Consensus 65 ~~~IPvIDls~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~GY~~ 144 (196)
..+||||||+.+.+ .+.+++++|++||++||||||+||||+.++++++++.+++||+||.|+|+++... .....||..
T Consensus 4 ~~~iPvIDls~~~~-~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~~Gy~~ 81 (312)
T 3oox_A 4 TSAIDPVSFSLYAK-DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV-KGGARGYIP 81 (312)
T ss_dssp CCSSCCEETHHHHH-CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS-GGGTSEEEC
T ss_pred CCCCCeEEChHhcc-cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC-CCCcccccc
Confidence 45799999987643 4788999999999999999999999999999999999999999999999998643 344678965
Q ss_pred CCCc--ccccCcChhhhhccccccCC-C-----CCCCCCc---hHHHHHHHHHHHHHHHhhhC
Q 046531 145 NFDL--HYSRTANWRDTLTISALAST-D-----LDPNEYP---EVCRDAVREYIKNVTKLAET 196 (196)
Q Consensus 145 ~~~~--~~~~~~d~~E~f~~~~~~p~-~-----~~~~~~P---~~fr~~~~~Y~~~~~~La~r 196 (196)
.... ......||+|+|+++...|. . ..++.|| ++||+++++|+++|.+|+.+
T Consensus 82 ~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ 144 (312)
T 3oox_A 82 FGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGK 144 (312)
T ss_dssp CCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred ccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 4322 23356899999988621121 1 1134555 57999999999999999863
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=99.95 E-value=3.1e-28 Score=206.48 Aligned_cols=123 Identities=25% Similarity=0.459 Sum_probs=100.5
Q ss_pred CCcceeeCCCCCCCcHHHHHHHHHHHHHHcCceEEeecCCCHHHHHHHHHHHHHHhcCCHHHHhhhhhcCCCCcccccCC
Q 046531 66 FQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKEFYTRDRTRNVRFNSN 145 (196)
Q Consensus 66 ~~IPvIDls~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~GY~~~ 145 (196)
.+||||||+.+....+..++++|++||++||||||+||||+.++++++++.+++||+||.|+|+++... ..||+..
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~----~~Gy~~~ 77 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA----SKALEGV 77 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHTTC
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC----CCCCCcc
Confidence 369999999875335888999999999999999999999999999999999999999999999997532 3478654
Q ss_pred CCcccccCcChhhhhccccccCCCCCCCCC---chHHHHHHHHHHHHHHHhhhC
Q 046531 146 FDLHYSRTANWRDTLTISALASTDLDPNEY---PEVCRDAVREYIKNVTKLAET 196 (196)
Q Consensus 146 ~~~~~~~~~d~~E~f~~~~~~p~~~~~~~~---P~~fr~~~~~Y~~~~~~La~r 196 (196)
.. ..+..||+|+|++. ..|.. .++.| |++||+++++|+++|.+|+.+
T Consensus 78 ~~--e~~~~d~ke~~~~~-~~p~~-~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ 127 (319)
T 1w9y_A 78 QA--EVTDMDWESTFFLK-HLPIS-NISEVPDLDEEYREVMRDFAKRLEKLAEE 127 (319)
T ss_dssp CC--CGGGCCCCEEEEEE-EESCC-GGGGCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cc--cCCCCChhhheeee-cCCcc-cccccccchhHHHHHHHHHHHHHHHHHHH
Confidence 22 23578999999988 55531 12234 368999999999999999863
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=99.95 E-value=4e-28 Score=205.09 Aligned_cols=123 Identities=15% Similarity=0.159 Sum_probs=93.1
Q ss_pred CCcceeeCCCCCCCcHHHHHHHHHHHHHHcCceEEeecCCCHHHHHHHHHHHHHHhcCC-HHHHhhhhhcCCCCcccccC
Q 046531 66 FQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQD-VELKKEFYTRDRTRNVRFNS 144 (196)
Q Consensus 66 ~~IPvIDls~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP-~eeK~~~~~~~~~~~~GY~~ 144 (196)
..||||||+.+.++.. .++|++||++||||||+||||+.++++++++.+++||+|| .|+|+++.........||+.
T Consensus 3 ~~iPvIDls~l~~~~~---~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~ 79 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLH---QDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTG 79 (311)
T ss_dssp CCCCEEEHHHHHTTCS---HHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEE
T ss_pred CCCcEEEchhhcCCCH---HHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceee
Confidence 4699999987643211 1399999999999999999999999999999999999999 99999986543345689986
Q ss_pred CCCc------ccccCcChhhhhccccccCCCCCCCCCchHHHHHHHHHHHHHHHhhhC
Q 046531 145 NFDL------HYSRTANWRDTLTISALASTDLDPNEYPEVCRDAVREYIKNVTKLAET 196 (196)
Q Consensus 145 ~~~~------~~~~~~d~~E~f~~~~~~p~~~~~~~~P~~fr~~~~~Y~~~~~~La~r 196 (196)
.... ...+..||+|+|+++ ..|+ .|| |++||+++++|+++|.+|+.+
T Consensus 80 ~~~e~~~~~~~~~~~~d~~E~~~~~-~~~n-~wP---~~~fr~~~~~y~~~~~~l~~~ 132 (311)
T 1dcs_A 80 LESESTAQITNTGSYSDYSMCYSMG-TADN-LFP---SGDFERIWTQYFDRQYTASRA 132 (311)
T ss_dssp C-----------------CEEEEEC-SSSC-CCS---CHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCCCCcceeeecc-CCCC-CCC---ChHHHHHHHHHHHHHHHHHHH
Confidence 5432 224678999999998 5543 244 478999999999999999863
No 5
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=99.94 E-value=7e-27 Score=194.84 Aligned_cols=115 Identities=17% Similarity=0.244 Sum_probs=92.1
Q ss_pred CCcceeeCCCCCCCcHHHHHHHHHHHHHHcCceEEeecCCCHHHHHHHHHHHHHHhcCCHHHHhhhhhcCCCCcccccCC
Q 046531 66 FQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQDVELKKEFYTRDRTRNVRFNSN 145 (196)
Q Consensus 66 ~~IPvIDls~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~~~~~~~~~~~~GY~~~ 145 (196)
.+||||||+.. ..+++|.+||++||||||+||||+.++++++++.+++||+| |+|+++.. .+....||+..
T Consensus 2 ~~IPvIDls~~------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~-~~~~~~GY~~~ 72 (280)
T 3on7_A 2 MKLETIDYRAA------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMF-NRETHDGFFPA 72 (280)
T ss_dssp --CCEEETTST------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBC-CTTTCCEEECC
T ss_pred CCCCEEECCCh------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhcc-CCCCCCccccC
Confidence 36999999874 35799999999999999999999999999999999999998 89999753 34557899764
Q ss_pred C---CcccccCcChhhhhccccccCCCCCCCCCchHHHHHHHHHHHHHHHhhhC
Q 046531 146 F---DLHYSRTANWRDTLTISALASTDLDPNEYPEVCRDAVREYIKNVTKLAET 196 (196)
Q Consensus 146 ~---~~~~~~~~d~~E~f~~~~~~p~~~~~~~~P~~fr~~~~~Y~~~~~~La~r 196 (196)
. ........||+|+|++. | |+ .+|++||+++++|+++|.+|+++
T Consensus 73 ~~~e~~~~~~~~D~kE~~~~~---p---~~-~~p~~fr~~~~~y~~~~~~l~~~ 119 (280)
T 3on7_A 73 SISETAKGHTVKDIKEYYHVY---P---WG-RIPDSLRANILAYYEKANTLASE 119 (280)
T ss_dssp C--------CCCCSCEEEEEC---T---TS-CCCGGGHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCcccHHHHHhcC---C---CC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 3 12233468999999875 2 22 46779999999999999999863
No 6
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=99.93 E-value=1e-25 Score=191.78 Aligned_cols=122 Identities=21% Similarity=0.288 Sum_probs=95.4
Q ss_pred CCCcceeeCCCCCC-C--cHHHHHHHHHHHHHHcCceEEeecCCCHHHHHHHHHHHHHH-hcCCHHHHhhhhhcCCCCcc
Q 046531 65 NFQVPVIDLDGVRG-N--KLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKF-NEQDVELKKEFYTRDRTRNV 140 (196)
Q Consensus 65 ~~~IPvIDls~~~~-~--~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~F-F~LP~eeK~~~~~~~~~~~~ 140 (196)
..+||||||+.+.+ + .+.+++++|++||++||||||+|||| +++++++.+++| |+||.|+|+++.. .
T Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~------~ 76 (331)
T 1odm_A 6 KANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI------R 76 (331)
T ss_dssp BCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC------T
T ss_pred CCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh------c
Confidence 45799999998854 2 56789999999999999999999999 999999999999 9999999999853 4
Q ss_pred cccCCCCc--cc------ccCcChhhhhccccccC--C---------CCCCCCCc-----hHHHHHHHHHHHHHHHhhhC
Q 046531 141 RFNSNFDL--HY------SRTANWRDTLTISALAS--T---------DLDPNEYP-----EVCRDAVREYIKNVTKLAET 196 (196)
Q Consensus 141 GY~~~~~~--~~------~~~~d~~E~f~~~~~~p--~---------~~~~~~~P-----~~fr~~~~~Y~~~~~~La~r 196 (196)
||...... .. .+..||+|.|+++ ..+ . ...++.|| ++||+++++|+++|.+|+.+
T Consensus 77 Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~-~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ 155 (331)
T 1odm_A 77 AYNKEHQDQVRAGYYLSIPGKKAVESFCYLN-PNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSA 155 (331)
T ss_dssp TTCTTCTTCSSSEEECCBTTTBCCEEEEECC-TTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCccccccccccccCCCCChhheEecc-cCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 66543211 11 2578999999987 321 0 01133444 47999999999999999863
No 7
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=68.84 E-value=9.6 Score=31.45 Aligned_cols=43 Identities=16% Similarity=0.198 Sum_probs=35.5
Q ss_pred cHHHHHHHHHHHHHHcCceEEeecCCC----HHHHHHHHHHHHHHhc
Q 046531 80 KLEEIVDQVRAAAETWGFFQVVNHGIP----LNVLEEMIEGIRKFNE 122 (196)
Q Consensus 80 ~~~~~~~~l~~Ac~~~GFF~v~nHGI~----~~li~~~~~~~~~FF~ 122 (196)
..+++.+++.+.++.-||..=.+|||+ .+-+..+.+++++|++
T Consensus 302 ~~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 302 PVDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 466777888888888888777789974 6789999999999985
No 8
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=64.91 E-value=6.1 Score=20.97 Aligned_cols=19 Identities=21% Similarity=0.441 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHcCceEE
Q 046531 82 EEIVDQVRAAAETWGFFQV 100 (196)
Q Consensus 82 ~~~~~~l~~Ac~~~GFF~v 100 (196)
.++++.|.-.|.+-|||+.
T Consensus 9 s~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHHhccCccccC
Confidence 5788999999999999983
No 9
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=59.88 E-value=3.1 Score=32.10 Aligned_cols=36 Identities=25% Similarity=0.267 Sum_probs=28.3
Q ss_pred CcceeeCCCCCCCcHHHHHHHHHHHHHHcCceEEeecCC
Q 046531 67 QVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGI 105 (196)
Q Consensus 67 ~IPvIDls~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI 105 (196)
.||+++..... ..++++.+.++..+.-.+.+.|||+
T Consensus 125 ~v~~~~y~~~g---~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPG---SPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTT---CHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCC---cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 69999876542 2467888888888877888899996
No 10
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=58.97 E-value=5.2 Score=30.64 Aligned_cols=36 Identities=25% Similarity=0.209 Sum_probs=28.2
Q ss_pred Cccee-eCCCCCCCcHHHHHHHHHHHHHHcCceEEeecCC
Q 046531 67 QVPVI-DLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGI 105 (196)
Q Consensus 67 ~IPvI-Dls~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI 105 (196)
.||++ +..... ..++++.+.++..+.-.+.+.|||+
T Consensus 117 ~ip~~~~y~~~g---~~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVSA---TEEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCCSS---SHHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCCCC---cHHHHHHHHHHhCcCCEEEECCCCc
Confidence 69999 665442 3467888888888888888999996
No 11
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=58.26 E-value=4.4 Score=35.33 Aligned_cols=57 Identities=12% Similarity=0.228 Sum_probs=41.5
Q ss_pred CCCCCcceeeCCCCCCCcHHHHHHHHHHHHHHcCceEEeecCCCHHHHHHHHHHHHHHhcC
Q 046531 63 QTNFQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQ 123 (196)
Q Consensus 63 ~~~~~IPvIDls~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~L 123 (196)
.++..||.||++.+.+ ..+..+..+..++.|++.|.|+ ||.+......+...+|.+.
T Consensus 96 ~G~~~iP~i~f~di~~---~~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~~ 152 (461)
T 2dbn_A 96 QGDAVWPVLSYADIKA---GHVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLDR 152 (461)
T ss_dssp TTCCSSCEEEHHHHHH---TCCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcceecHHHhcC---CCCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHHh
Confidence 4566799999987621 1233566778899999866554 8998888888888887643
No 12
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=54.87 E-value=7.8 Score=29.64 Aligned_cols=36 Identities=17% Similarity=0.334 Sum_probs=27.7
Q ss_pred CCcceeeCCCCCCCcHHHHHHHHHHHHHHcC---ceEEeecCC
Q 046531 66 FQVPVIDLDGVRGNKLEEIVDQVRAAAETWG---FFQVVNHGI 105 (196)
Q Consensus 66 ~~IPvIDls~~~~~~~~~~~~~l~~Ac~~~G---FF~v~nHGI 105 (196)
..||+++.. . ...++++.+.++..+.+ .+.+.|||+
T Consensus 138 ~~vp~~~~~-~---g~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 138 IKIPIFPNE-Q---NIPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp CEEEEECCC-S---CHHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred cceeeecCC-C---CHHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 368888763 2 45678889999998865 788899996
No 13
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=53.86 E-value=4.5 Score=31.26 Aligned_cols=37 Identities=16% Similarity=0.227 Sum_probs=28.4
Q ss_pred CCcceeeCCCCCCCcHHHHHHHHHHHHHHcCceEEeecCC
Q 046531 66 FQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGI 105 (196)
Q Consensus 66 ~~IPvIDls~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI 105 (196)
..||+++..... -.++++.+.++..+.-.+.+.|||+
T Consensus 121 ~~ip~~~y~~~g---~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 121 NSIPCAPYATFG---TRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp SCBCEECCCCTT---CHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CCcceeeCCCCC---cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 369999876542 2467788888888777888889996
No 14
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=49.46 E-value=6.5 Score=30.81 Aligned_cols=37 Identities=14% Similarity=0.106 Sum_probs=28.6
Q ss_pred CCcceeeCCCCCCCcHHHHHHHHHHHHHHcCceEEeecCC
Q 046531 66 FQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGI 105 (196)
Q Consensus 66 ~~IPvIDls~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI 105 (196)
..||+++..... ..++++.+.++..+.-.+.+.|||+
T Consensus 160 ~~v~~~~y~~~g---~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKPG---SVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCSTT---CHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCCC---cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 369999886542 2467788888888878888899997
No 15
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=48.02 E-value=6.7 Score=31.57 Aligned_cols=36 Identities=11% Similarity=0.073 Sum_probs=28.7
Q ss_pred CcceeeCCCCCCCcHHHHHHHHHHHHHHcCceEEeecCC
Q 046531 67 QVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGI 105 (196)
Q Consensus 67 ~IPvIDls~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI 105 (196)
.||+++..... -.++++.+.+++.+.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~g---~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVPG---TDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCSS---SHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCCC---CHHHHHHHHHHHccCCEEEEcCCCc
Confidence 69999875442 2467888999998888888999996
No 16
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=38.30 E-value=40 Score=26.55 Aligned_cols=52 Identities=15% Similarity=0.113 Sum_probs=37.6
Q ss_pred CCCcceeeCCCCCCCcHHHHHHHHHHHHHHcCceEEeecCCCHHHHHHHHHHHHHHhc
Q 046531 65 NFQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNE 122 (196)
Q Consensus 65 ~~~IPvIDls~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~ 122 (196)
..+|+-||++...+ .+...+|.+++.++|+..+.|-.++.+. ..+.++.|-.
T Consensus 15 Gaei~gvdl~~~l~---~~~~~~l~~~l~~~Gvv~frg~~~~~~~---~~~~~~~~G~ 66 (283)
T 1otj_A 15 GAQISGADLTRPLS---DNQFEQLYHAVLRHQVVFLRDQAITPQQ---QRALAQRFGE 66 (283)
T ss_dssp CEEEESCCSSSCCC---HHHHHHHHHHHHHHSEEEECSCCCCHHH---HHHHHHTTSC
T ss_pred eEEEECCCcCccCC---HHHHHHHHHHHHHCCEEEECCCCCCHHH---HHHHHHHhCC
Confidence 45688889987432 3457899999999999999988887643 3445566543
No 17
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=37.93 E-value=13 Score=29.97 Aligned_cols=37 Identities=16% Similarity=0.163 Sum_probs=28.5
Q ss_pred CcceeeCCCCCCCcHHHHHHHHHHHHHHcCceEEeecCC
Q 046531 67 QVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGI 105 (196)
Q Consensus 67 ~IPvIDls~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI 105 (196)
.||++|+..+.. ..++++.|.+++.+.-.+.|.|||+
T Consensus 156 ~v~~~~y~~~~~--~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 156 RVAYHGYEGIAL--DLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TEEEECCCCSSC--CHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CEEEECCCCCCC--CHHHHHHHHHHhCcCCEEEEcCCce
Confidence 589988865421 2456788888888888999999996
No 18
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=36.94 E-value=16 Score=30.80 Aligned_cols=52 Identities=13% Similarity=0.157 Sum_probs=39.3
Q ss_pred CcceeeCCCCCCCcHHHHHHHHHHHHHHcCceEEeecCCCHHHHHHHHHHHHHHhcC
Q 046531 67 QVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQ 123 (196)
Q Consensus 67 ~IPvIDls~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~L 123 (196)
++|-||++.+.. ..+...++..|+.++|+..+.|-.++.+ ...+.++.|-.+
T Consensus 122 ~~~~~~~~~~l~--~d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLR--YDEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHH--CHHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHhc--CHHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 689999876532 2467789999999999999999888754 444667777554
No 19
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=34.64 E-value=89 Score=23.00 Aligned_cols=39 Identities=18% Similarity=0.343 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHcC-ceEEee-cCCCHHHHHHHHHHHHH
Q 046531 81 LEEIVDQVRAAAETWG-FFQVVN-HGIPLNVLEEMIEGIRK 119 (196)
Q Consensus 81 ~~~~~~~l~~Ac~~~G-FF~v~n-HGI~~~li~~~~~~~~~ 119 (196)
+..++++|.+.+++.. .++|++ +|++...+.+++...++
T Consensus 6 K~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr~ 46 (173)
T 2j01_J 6 NVELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALKQ 46 (173)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHHH
Confidence 5667888888888888 666665 57888888888777664
No 20
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=33.71 E-value=78 Score=24.30 Aligned_cols=42 Identities=14% Similarity=0.260 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHcCc---eEE---eecCCCHHHHHHHHHHHHHHhcC
Q 046531 82 EEIVDQVRAAAETWGF---FQV---VNHGIPLNVLEEMIEGIRKFNEQ 123 (196)
Q Consensus 82 ~~~~~~l~~Ac~~~GF---F~v---~nHGI~~~li~~~~~~~~~FF~L 123 (196)
.+.++++.+.+++.|+ |.. .+|+|+.+.++++.+..++-|+|
T Consensus 199 ~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~~~~l~~~~~fL~k~l~l 246 (246)
T 4f21_A 199 EVLGHDLSDKLKVSGFANEYKHYVGMQHSVCMEEIKDISNFIAKTFKI 246 (246)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEESSCCSSCCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHCCCCeEEEEECCCCCccCHHHHHHHHHHHHHHhCC
Confidence 3556777888888886 333 37999999888887776665543
No 21
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=32.96 E-value=55 Score=26.04 Aligned_cols=53 Identities=9% Similarity=0.020 Sum_probs=38.6
Q ss_pred CCCcceeeCCCCCCCcHHHHHHHHHHHHHHcCceEEeecC-CCHHHHHHHHHHHHHHhcC
Q 046531 65 NFQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHG-IPLNVLEEMIEGIRKFNEQ 123 (196)
Q Consensus 65 ~~~IPvIDls~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHG-I~~~li~~~~~~~~~FF~L 123 (196)
..+|+-|||+...+ .+..++|.+++.++|+..+.|-. ++. +...+.++.|-.+
T Consensus 25 Gaei~gvdl~~~l~---~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~l 78 (301)
T 1oih_A 25 GAEIRGVKLSPDLD---AATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGEP 78 (301)
T ss_dssp CEEEESCCCCTTCC---HHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSCB
T ss_pred ceEEeCCCccccCC---HHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCCC
Confidence 44677789887432 34678999999999999998877 774 4555666666543
No 22
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=32.15 E-value=88 Score=23.20 Aligned_cols=40 Identities=18% Similarity=0.214 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHcCceEEee-cCCCHHHHHHHHHHHHHH
Q 046531 81 LEEIVDQVRAAAETWGFFQVVN-HGIPLNVLEEMIEGIRKF 120 (196)
Q Consensus 81 ~~~~~~~l~~Ac~~~GFF~v~n-HGI~~~li~~~~~~~~~F 120 (196)
+..++++|.+.+++...++|++ +|++...+.+++...++-
T Consensus 8 K~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~~ 48 (180)
T 1zav_A 8 KELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLREK 48 (180)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 5678888999999888888886 489988888888877653
No 23
>2csf_A DNA-binding protein SATB2; CUT domain, special AT-rich sequence-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.35.1.7
Probab=30.07 E-value=61 Score=22.02 Aligned_cols=26 Identities=19% Similarity=0.317 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHhhhhh
Q 046531 107 LNVLEEMIEGIRKFNEQDVELKKEFYT 133 (196)
Q Consensus 107 ~~li~~~~~~~~~FF~LP~eeK~~~~~ 133 (196)
..|.+++. ..+.|..||.++++.++.
T Consensus 67 ~~lW~~Lk-~m~nWL~Lpe~eR~~I~~ 92 (101)
T 2csf_A 67 RTLWENLC-TIRRFLNLPQHERDVIYE 92 (101)
T ss_dssp HHHHHHHH-HHHHHHTSCHHHHHHHHH
T ss_pred hhHHHHHH-HHHHHHcCCHHHHHHHHH
Confidence 44555554 677999999999999764
No 24
>2do1_A Nuclear protein HCC-1; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=30.01 E-value=66 Score=19.29 Aligned_cols=39 Identities=10% Similarity=0.289 Sum_probs=28.3
Q ss_pred eeeCCCCCCCcHHHHHHHHHHHHHHcCceEEeecCCCHHHHHHHHHHHH
Q 046531 70 VIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIR 118 (196)
Q Consensus 70 vIDls~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~ 118 (196)
++|++.+ .+.+|...|+.+|. ---|--.+|++++.+...
T Consensus 7 ~~~l~kl-------kV~eLK~~L~~rGL---~~~G~KaeLieRL~~~l~ 45 (55)
T 2do1_A 7 GVELHKL-------KLAELKQECLARGL---ETKGIKQDLIHRLQAYLE 45 (55)
T ss_dssp CCCTTTS-------CHHHHHHHHHHHTC---CCCSCHHHHHHHHHHHHH
T ss_pred ccCHHHC-------cHHHHHHHHHHcCC---CCCCcHHHHHHHHHHHHh
Confidence 3456555 36789999999993 456777889988876544
No 25
>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=29.44 E-value=18 Score=28.06 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=25.9
Q ss_pred cceeeCCCCCCCcHHHHHHHHHHHHHHc-CceEEeecCC
Q 046531 68 VPVIDLDGVRGNKLEEIVDQVRAAAETW-GFFQVVNHGI 105 (196)
Q Consensus 68 IPvIDls~~~~~~~~~~~~~l~~Ac~~~-GFF~v~nHGI 105 (196)
||++++... .- ++++.|.+++.+. -.+.|.|||+
T Consensus 156 v~~~~y~~~---g~-ela~~i~~~l~~~~~avlL~nHG~ 190 (222)
T 3m4r_A 156 VVVLPYIPP---GF-TLAKEVMNCFKKGIDGIVLRKHGL 190 (222)
T ss_dssp EEEECCCCS---SH-HHHHHHHHHCCTTCSEEEETTTEE
T ss_pred ceecCCcCC---cH-HHHHHHHHHHhcCCCEEEECCCCC
Confidence 888887654 23 6788888888754 5677899996
No 26
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=28.76 E-value=31 Score=27.63 Aligned_cols=40 Identities=25% Similarity=0.189 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHcCceEEeecCCCHHHHHHHHHHHHHHhc
Q 046531 83 EIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNE 122 (196)
Q Consensus 83 ~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~ 122 (196)
+..++|.++|++.+.++.-|-.+...++.++.+.+.++|.
T Consensus 110 ~~~~~L~~aa~~~~vv~a~N~s~Gv~l~~~~~~~aa~~l~ 149 (272)
T 4f3y_A 110 PQKAQLRAAGEKIALVFSANMSVGVNVTMKLLEFAAKQFA 149 (272)
T ss_dssp HHHHHHHHHTTTSEEEECSCCCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHhccCCEEEECCCCHHHHHHHHHHHHHHHhcC
Confidence 3467899999999999999999988999999888888884
No 27
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=28.06 E-value=33 Score=26.95 Aligned_cols=41 Identities=10% Similarity=0.250 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHcCceEEeecCCCHHHHHHHHHHHHHHhc
Q 046531 82 EEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNE 122 (196)
Q Consensus 82 ~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~ 122 (196)
.+..++|.++|++.++++--|-.|-..++.++.+.+.++|.
T Consensus 88 ~e~~~~l~~aa~~~~v~~a~N~S~Gv~l~~~~~~~aa~~l~ 128 (243)
T 3qy9_A 88 EKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLLD 128 (243)
T ss_dssp HHHHHHHHHHTTTSEEEECSSCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCEEEECCccHHHHHHHHHHHHHHHhcC
Confidence 44578999999999999999999999999999998888874
No 28
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=27.87 E-value=40 Score=27.34 Aligned_cols=39 Identities=15% Similarity=0.129 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHcCceEEeecCCCHHHHHHHHHHHHHHhc
Q 046531 84 IVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNE 122 (196)
Q Consensus 84 ~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~ 122 (196)
..++|.++|++.++|+.-|-.|...++.++.+.+.++|.
T Consensus 126 ~~~~L~~aa~~~~~~~a~N~SiGv~ll~~l~~~aa~~l~ 164 (288)
T 3ijp_A 126 EEAQIADFAKYTTIVKSGNMSLGVNLLANLVKRAAKALD 164 (288)
T ss_dssp HHHHHHHHHTTSEEEECSCCCHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhCcCCEEEECCCcHHHHHHHHHHHHHHHhcC
Confidence 456788889998988888988888888888888888775
No 29
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=27.42 E-value=99 Score=23.71 Aligned_cols=39 Identities=21% Similarity=0.304 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHcCceEEee-cCCCHHHHHHHHHHHHH
Q 046531 81 LEEIVDQVRAAAETWGFFQVVN-HGIPLNVLEEMIEGIRK 119 (196)
Q Consensus 81 ~~~~~~~l~~Ac~~~GFF~v~n-HGI~~~li~~~~~~~~~ 119 (196)
+.+.+++|.+.+.++..++|++ +|++...+.++++..|+
T Consensus 5 K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr~ 44 (213)
T 3jsy_A 5 KIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRD 44 (213)
T ss_dssp HHHHHHHHHHHHHHSSEEEEEECCSCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHhC
Confidence 4556777777777777666665 57777777777766653
No 30
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=26.23 E-value=95 Score=24.98 Aligned_cols=53 Identities=19% Similarity=0.164 Sum_probs=38.9
Q ss_pred CCCcceeeCCCCCCCcHHHHHHHHHHHHHHcCceEEeec-CCCHHHHHHHHHHHHHHhcC
Q 046531 65 NFQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNH-GIPLNVLEEMIEGIRKFNEQ 123 (196)
Q Consensus 65 ~~~IPvIDls~~~~~~~~~~~~~l~~Ac~~~GFF~v~nH-GI~~~li~~~~~~~~~FF~L 123 (196)
+.+|+=|||+...+ .+..++|+.|+.++|+..+.|- .++.+ +..+.++.|=.+
T Consensus 19 Gaei~gvdl~~~L~---d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 19 GARVDGVRLGGDLD---DATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp CEEEESCCCSTTCC---HHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred cceEeCCCccccCC---HHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 45677789984322 4567899999999999999988 78764 445667777554
No 31
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=22.95 E-value=91 Score=24.66 Aligned_cols=53 Identities=13% Similarity=0.110 Sum_probs=38.7
Q ss_pred CCCcceeeCCCCCCCcHHHHHHHHHHHHHHcCceEEeecCCCHHHHHHHHHHHHHHhcC
Q 046531 65 NFQVPVIDLDGVRGNKLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNEQ 123 (196)
Q Consensus 65 ~~~IPvIDls~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~L 123 (196)
+.+|.=|||+...+ .+..++|..|+.++|+..+.|-.++.+ +..+.++.|=.+
T Consensus 13 Gaei~gvdl~~~l~---~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG~l 65 (277)
T 3pvj_A 13 GAQISGVDISRDIS---AEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFGDL 65 (277)
T ss_dssp CEEEESCCTTSCCC---HHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGSCE
T ss_pred eEEEeCCCccccCC---HHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCCC
Confidence 45677789987432 356789999999999999998888754 344566666543
No 32
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=22.74 E-value=1.1e+02 Score=23.82 Aligned_cols=36 Identities=14% Similarity=0.189 Sum_probs=29.2
Q ss_pred HHHHHHHHHcCceEEeecCCCHHHHHHHHHHHHHHhc
Q 046531 86 DQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIRKFNE 122 (196)
Q Consensus 86 ~~l~~Ac~~~GFF~v~nHGI~~~li~~~~~~~~~FF~ 122 (196)
+++.+.+++.||+.|.| =++.+.++++.+...+.++
T Consensus 22 ~~~~~~f~~dGyvvl~~-~l~~e~v~~l~~~~~~~~~ 57 (288)
T 2rdq_A 22 AALDSFYEEHGYLFLRN-VLDRDLVKTVAEQMREGLV 57 (288)
T ss_dssp HHHHHHHHHHSEEEECS-CSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEeC-CCCHHHHHHHHHHHHHHHH
Confidence 45778899999988775 3899999999998887753
No 33
>3dd7_B PHD, prevent HOST death protein; all alpha, ribosome inhibitor; HET: MSE; 1.70A {Enterobacteria phage P1}
Probab=22.43 E-value=82 Score=15.47 Aligned_cols=20 Identities=0% Similarity=-0.077 Sum_probs=17.3
Q ss_pred hHHHHHHHHHHHHHHHhhhC...
Q 046531 177 EVCRDAVREYIKNVTKLAET... 196 (196)
Q Consensus 177 ~~fr~~~~~Y~~~~~~La~r... 196 (196)
.+|-..|..+..++++|+.|
T Consensus 4 aEFaaIm~~hg~t~~~L~dR... 23 (23)
T 3dd7_B 4 AEFASLFDTLDSTNKEMVNRxxx 26 (26)
T ss_pred hHHHHHHHHHhHHHHHHhcC...
Confidence 46888999999999999876
No 34
>1zei_A Insulin, B28Asp-X-MCR; hormone, metabolic role, chemical activity, insulin mutant, cross-LINK, glucose metabolism, diabetes; 1.90A {Sus scrofa} SCOP: g.1.1.1 PDB: 6ins_E 1sju_A 2jzq_A
Probab=20.50 E-value=78 Score=18.81 Aligned_cols=19 Identities=21% Similarity=0.441 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHcCceEE
Q 046531 82 EEIVDQVRAAAETWGFFQV 100 (196)
Q Consensus 82 ~~~~~~l~~Ac~~~GFF~v 100 (196)
.++++.|...|.+-||++-
T Consensus 9 ~~L~daL~~vC~~rgf~~~ 27 (53)
T 1zei_A 9 SHLVEALYLVCGERGFFYT 27 (53)
T ss_dssp HHHHHHHHHHHGGGCEEEE
T ss_pred HHHHHHHHHHHcccCeecC
Confidence 4678888889999999875
No 35
>2wfu_B Probable insulin-like peptide 5 B chain; cleavage on PAIR of basic residues, signaling protein; 1.85A {Drosophila melanogaster} PDB: 2wfv_B
Probab=20.33 E-value=32 Score=17.50 Aligned_cols=15 Identities=33% Similarity=0.682 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHcCc
Q 046531 82 EEIVDQVRAAAETWGF 97 (196)
Q Consensus 82 ~~~~~~l~~Ac~~~GF 97 (196)
.++.+.|...|.+ ||
T Consensus 8 ~~L~eaL~~vC~~-GF 22 (26)
T 2wfu_B 8 PALMDMLRVACPN-GF 22 (26)
T ss_dssp HHHHHHHHHHCSS-CC
T ss_pred HHHHHHHHHHHhc-cC
Confidence 4577888888887 87
Done!