BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046537
(382 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 140/314 (44%), Gaps = 19/314 (6%)
Query: 53 PINLSEIAMTLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAET--QAMVGRLFFKDCLPF 110
P + ++ + NI + FG+RF E T + +F+E A +F + P+
Sbjct: 150 PFDFKQLITNAVSNITNLIIFGERFTYEDTD-FQHMIELFSENVELAASASVFLYNAFPW 208
Query: 111 VGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTA-- 168
+G G +++L N + +LIE ++P++ + +D L EM
Sbjct: 209 IGILP---FGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQH--FVDAYLDEMDQGKN 263
Query: 169 DDHQTFDS---IKSTIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGF 225
D TF I S IA T+T L WA+ + +VQKE+ ++ G
Sbjct: 264 DPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGK 323
Query: 226 VDEDDLQRLEYLKAVVKETMRF---QPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAI 282
DD ++ Y +AV+ E +RF P G F T+E V+ GY IP TTV N+ ++
Sbjct: 324 PSWDDKCKMPYTEAVLHEVLRFCNIVPLGIF--HATSEDAVVRGYSIPKGTTVITNLYSV 381
Query: 283 GRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLL 342
D + W P+ F PERF+ S+ + +PF GRR C G +A + L LL
Sbjct: 382 HFDEKYWRDPEVFHPERFLDSSGYFAKKE-ALVPFSLGRRHCLGEHLARMEMFLFFTALL 440
Query: 343 YKFDWKMPHGMKID 356
+F PH + D
Sbjct: 441 QRFHLHFPHELVPD 454
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 140/314 (44%), Gaps = 19/314 (6%)
Query: 53 PINLSEIAMTLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAET--QAMVGRLFFKDCLPF 110
P + ++ + NI + FG+RF E T + +F+E A +F + P+
Sbjct: 150 PFDFKQLITNAVSNITNLIIFGERFTYEDTD-FQHMIELFSENVELAASASVFLYNAFPW 208
Query: 111 VGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTA-- 168
+G G +++L N + +LIE ++P++ + +D L EM
Sbjct: 209 IGILP---FGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQH--FVDAYLDEMDQGKN 263
Query: 169 DDHQTFDS---IKSTIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGF 225
D TF I S IA T+T L WA+ + +VQKE+ ++ G
Sbjct: 264 DPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGK 323
Query: 226 VDEDDLQRLEYLKAVVKETMRF---QPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAI 282
DD ++ Y +AV+ E +RF P G F T+E V+ GY IP TTV N+ ++
Sbjct: 324 PSWDDKCKMPYTEAVLHEVLRFCNIVPLGIF--HATSEDAVVRGYSIPKGTTVITNLYSV 381
Query: 283 GRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLL 342
D + W P+ F PERF+ S+ + +PF GRR C G +A + L LL
Sbjct: 382 HFDEKYWRDPEVFHPERFLDSSGYFAKKE-ALVPFSLGRRHCLGEHLARMEMFLFFTALL 440
Query: 343 YKFDWKMPHGMKID 356
+F PH + D
Sbjct: 441 QRFHLHFPHELVPD 454
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 135/300 (45%), Gaps = 21/300 (7%)
Query: 62 TLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRLFFKDCLPFVGCWLDSLTGW 121
++ NII + FGKRF + + L ++F +T +++ +F + F G +L G
Sbjct: 154 SITANIICSIVFGKRFHYQDQEFLKML-NLFYQTFSLISSVFGQLFELFSG-FLKHFPGA 211
Query: 122 NRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLAEMKT--ADDHQTFDS 176
+R++ N + + +E H LDP P+ DLID L M+ ++ H F
Sbjct: 212 HRQVYKNLQEINAYIGHSVEKHRETLDPSAPR-----DLIDTYLLHMEKEKSNAHSEFSH 266
Query: 177 IK---STIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQR 233
+T+ A T+T TL + ++K ++V +E+ V+ + D +
Sbjct: 267 QNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAK 326
Query: 234 LEYLKAVVKETMRFQ---PAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWD 290
+ Y +AV+ E RF P G + T+ GY IP T VF+ + D ++
Sbjct: 327 MPYTEAVIYEIQRFSDLLPMG--VPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFE 384
Query: 291 KPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMP 350
KPD F P+ F+ +N + FIPF G+RIC G IA + L +L F P
Sbjct: 385 KPDAFNPDHFLDANGALKKTE-AFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASP 443
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 137/294 (46%), Gaps = 21/294 (7%)
Query: 66 NIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRLFFKDCLPFVGCWLDSLTGWNRRL 125
N+I + F K F D RL +F E ++ + + F +L L G +R++
Sbjct: 157 NVIADILFRKHF-DYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPS-FLHYLPGSHRKV 214
Query: 126 RNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLAEMK----TADDHQTFDSIK 178
N ++ + + +++H LDP P+ DL D LL EM+ +A+ T D I
Sbjct: 215 IKNVAEVKEYVSERVKEHHQSLDPNCPR-----DLTDCLLVEMEKEKHSAERLYTMDGIT 269
Query: 179 STIME-NIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYL 237
T+ + A T+T TL + + LMK E +K+ +E+ V+ D Q + Y+
Sbjct: 270 VTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYM 329
Query: 238 KAVVKETMRF---QPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDE 294
AVV E RF P+ L E T + GY IP T V + ++ D Q + P++
Sbjct: 330 DAVVHEIQRFITLVPSN--LPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEK 387
Query: 295 FIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
F PE F+ N ++ F PF G+R+CAG +A + L L +L F+ K
Sbjct: 388 FKPEHFLNENGKFKYSDY-FKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLK 440
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 95/178 (53%), Gaps = 3/178 (1%)
Query: 170 DHQTFDSIKSTIME-NIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDE 228
DH + + + + E +AA +T +L W + NL +N +A +++ +EV+ V+ D
Sbjct: 277 DHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRA 336
Query: 229 DDLQRLEYLKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQV 288
+DL+ + YLKA +KE+MR P+ F R + V+ Y +P T + +N +G
Sbjct: 337 EDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDN 396
Query: 289 WDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFD 346
++ +F PER++ + F +PFG G+R+C G +A + LAL ++ K+D
Sbjct: 397 FEDSHKFRPERWLQKEKKINP--FAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYD 452
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 93/175 (53%), Gaps = 5/175 (2%)
Query: 186 AATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKETM 245
A DT+ + W++ L+ E +K+QKE+ V+ + D +L YL+A + ET
Sbjct: 293 AGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETF 352
Query: 246 RFQPAGQFLL-RETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFV--- 301
R F + TT ++G++IP K VFVN + D ++W+ P EF PERF+
Sbjct: 353 RHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTAD 412
Query: 302 GSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKID 356
G+ I+ + + FG G+R C G +A + L LA LL + ++ +P G+K+D
Sbjct: 413 GTAINKPLSE-KMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVD 466
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 134/298 (44%), Gaps = 17/298 (5%)
Query: 62 TLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRLFFKDCLPFVGCWLDSLTGW 121
++ NII + FGKRF D RL +F ++ +++ + F G +L G
Sbjct: 154 SITSNIICSIVFGKRF-DYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSG-FLKYFPGT 211
Query: 122 NRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLAEMKT--ADDHQTF-- 174
+R++ N + + Q +E H LDP P+ D IDV L M+ +D F
Sbjct: 212 HRQIYRNLQEINTFIGQSVEKHRATLDPSNPR-----DFIDVYLLRMEKDKSDPSSEFHH 266
Query: 175 -DSIKSTIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQR 233
+ I + + A T+T TL + ++K ++VQKE+ V+ DD +
Sbjct: 267 QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAK 326
Query: 234 LEYLKAVVKETMRFQPAGQFLLRET-TEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKP 292
+ Y AV+ E R F + T T+ GY IP T VF + + D + ++ P
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386
Query: 293 DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMP 350
+ F P F+ +N + +N F+PF G+RICAG IA + L +L F P
Sbjct: 387 NTFNPGHFLDANGALK-RNEGFMPFSLGKRICAGEGIARTELFLFFTTILQNFSIASP 443
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 12/243 (4%)
Query: 118 LTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQED-----LIDVLLAEMKTADDHQ 172
L G ++LR + + +Q+ D + +R + E+ L +L AE DD
Sbjct: 185 LPGKRKQLRE-VRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQDDEG 243
Query: 173 TFDSIKSTIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQ 232
D+ + IA +T L + + L + E + ++Q EV V+ K ++D +DL
Sbjct: 244 LLDNFVTFF---IAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLG 300
Query: 233 RLEYLKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKP 292
RL+YL V+KE++R P R E+ +IDG +P T + + +GR ++ P
Sbjct: 301 RLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDP 360
Query: 293 DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHG 352
F P+RF F + PF G R C G A V++ +A LL + ++++ G
Sbjct: 361 LTFNPDRF---GPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPG 417
Query: 353 MKI 355
+
Sbjct: 418 QRF 420
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 93/186 (50%), Gaps = 4/186 (2%)
Query: 166 KTADDHQTFDSIK---STIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKD 222
K + H+ ++ +I+ A +T L + M L + + +K+Q+E+ V+ +
Sbjct: 260 KETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPN 319
Query: 223 KGFVDEDDLQRLEYLKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAI 282
K D + ++EYL VV ET+R P L R + I+G IP V + A+
Sbjct: 320 KAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYAL 379
Query: 283 GRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLL 342
RD + W +P++F+PERF N D + + PFG+G R C G A+ ++LAL +L
Sbjct: 380 HRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVL 438
Query: 343 YKFDWK 348
F +K
Sbjct: 439 QNFSFK 444
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 93/186 (50%), Gaps = 4/186 (2%)
Query: 166 KTADDHQTFDSIK---STIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKD 222
K + H+ ++ +I+ A +T L + M L + + +K+Q+E+ V+ +
Sbjct: 261 KETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPN 320
Query: 223 KGFVDEDDLQRLEYLKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAI 282
K D + ++EYL VV ET+R P L R + I+G IP V + A+
Sbjct: 321 KAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYAL 380
Query: 283 GRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLL 342
RD + W +P++F+PERF N D + + PFG+G R C G A+ ++LAL +L
Sbjct: 381 HRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVL 439
Query: 343 YKFDWK 348
F +K
Sbjct: 440 QNFSFK 445
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 93/186 (50%), Gaps = 4/186 (2%)
Query: 166 KTADDHQTFDSIK---STIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKD 222
K + H+ ++ +I+ A +T L + M L + + +K+Q+E+ V+ +
Sbjct: 262 KETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPN 321
Query: 223 KGFVDEDDLQRLEYLKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAI 282
K D + ++EYL VV ET+R P L R + I+G IP V + A+
Sbjct: 322 KAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYAL 381
Query: 283 GRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLL 342
RD + W +P++F+PERF N D + + PFG+G R C G A+ ++LAL +L
Sbjct: 382 HRDPKYWTEPEKFLPERFSKKNKD-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVL 440
Query: 343 YKFDWK 348
F +K
Sbjct: 441 QNFSFK 446
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 155/341 (45%), Gaps = 27/341 (7%)
Query: 31 EKISKLSXXXXXXXDDYVSSEAPINLSEIAMTLIRNIIFRVGFGKRFED--EGTAAVSRL 88
E +SK + + ++ N + + N+I + FG+R++ + ++ L
Sbjct: 134 EHVSKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRYDHNHQELLSLVNL 193
Query: 89 HSVFAETQAMVGRLFFKDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVY----QQLIEDHL 144
++ F E +VG D +P + +L + + N F D ++ + Q+++++H
Sbjct: 194 NNNFGE---VVGSGNPADFIPILR-YLPNPS------LNAFKDLNEKFYSFMQKMVKEHY 243
Query: 145 DPKRPKVAEQEDLIDVLL--AEMKTADDHQTFDSIKSTIMENI-----AATDTIKVTLEW 197
K + D+ D L+ + K D++ I+ + A DT+ + W
Sbjct: 244 --KTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISW 301
Query: 198 AMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKETMRFQPAGQFLL-R 256
++ L+ N +K+Q+E+ V+ D L Y++A + ET R F +
Sbjct: 302 SLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPH 361
Query: 257 ETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFE-FI 315
TT + G++IP VFVN I D ++W P EF+PERF+ + + E I
Sbjct: 362 STTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVI 421
Query: 316 PFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKID 356
FG G+R C G IA V L LA LL + ++ +P G+K+D
Sbjct: 422 IFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKVD 462
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 133/298 (44%), Gaps = 17/298 (5%)
Query: 62 TLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRLFFKDCLPFVGCWLDSLTGW 121
++ NII + FGKRF D RL +F ++ +++ + F G +L G
Sbjct: 154 SITSNIICSIVFGKRF-DYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSG-FLKHFPGT 211
Query: 122 NRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLAEMKT--ADDHQTF-- 174
+R++ N + + Q +E H LDP P+ D IDV L M+ +D F
Sbjct: 212 HRQIYRNLQEINTFIGQSVEKHRATLDPSNPR-----DFIDVYLLRMEKDKSDPSSEFHH 266
Query: 175 -DSIKSTIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQR 233
+ I + + A T+T TL + ++K ++VQKE+ V+ DD +
Sbjct: 267 QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAK 326
Query: 234 LEYLKAVVKETMRFQPAGQFLLRET-TEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKP 292
+ Y AV+ E R F + T T+ GY IP T VF + + D + ++ P
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386
Query: 293 DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMP 350
+ F P F+ +N + +N F+PF G+RIC G IA + L +L F P
Sbjct: 387 NTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 123/264 (46%), Gaps = 26/264 (9%)
Query: 73 FGKRF----EDEGTAAVSRLHSVFAETQAMVGRLFFKDCL-----PFVGCWLDSLTGWNR 123
FG+R +A+++ LH++ ++ V +F L P V W + W+
Sbjct: 179 FGERLGLVGHSPSSASLNFLHALEVMFKSTVQLMFMPRSLSRWISPKV--WKEHFEAWDC 236
Query: 124 RLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIKSTIME 183
+ + K+YQ+L + VAE +L AE+ + ++IK+ ME
Sbjct: 237 IFQYGDNCIQKIYQELAFNRPQHYTGIVAEL-----LLKAEL-------SLEAIKANSME 284
Query: 184 NIAAT-DTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVK 242
A + DT L + L +N + + +++E + L L+A +K
Sbjct: 285 LTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKATTELPLLRAALK 344
Query: 243 ETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG 302
ET+R P G FL R + V+ YHIPA T V V + ++GR+ ++ +P+ + P+R++
Sbjct: 345 ETLRLYPVGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWL- 403
Query: 303 SNIDMGGQNFEFIPFGAGRRICAG 326
+I G+NF +PFG G R C G
Sbjct: 404 -DIRGSGRNFHHVPFGFGMRQCLG 426
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 24/229 (10%)
Query: 138 QLIEDH---LDPKRPKVAEQEDLIDVLLAEMKTA--DDHQTFD--SIKSTIMENIAA-TD 189
+L+ +H DP +P DL + LAEM+ A + +F+ +++ + + +A
Sbjct: 231 ELLTEHRMTWDPAQPP----RDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMV 286
Query: 190 TIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKETMRFQ- 248
T TL W + ++ + + ++VQ+E+ V+ + D + Y AV+ E RF
Sbjct: 287 TTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGD 346
Query: 249 --PAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNID 306
P G + T+ + G+ IP TT+ N+ ++ +D VW+KP F PE F +D
Sbjct: 347 IVPLG--MTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHF----LD 400
Query: 307 MGGQNFE---FIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHG 352
G + F+PF AGRR C G P+A + L +LL F + +P G
Sbjct: 401 AQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTG 449
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 133/298 (44%), Gaps = 17/298 (5%)
Query: 62 TLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRLFFKDCLPFVGCWLDSLTGW 121
++ NII + FGKRF D RL +F ++ +++ + F G +L G
Sbjct: 154 SITSNIICSIVFGKRF-DYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSG-FLKYFPGT 211
Query: 122 NRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLAEMKT--ADDHQTF-- 174
+R++ N + + Q +E H LDP P+ D IDV L M+ +D F
Sbjct: 212 HRQIYRNLQEINTFIGQSVEKHRATLDPSNPR-----DFIDVYLLRMEKDKSDPSSEFHH 266
Query: 175 -DSIKSTIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQR 233
+ I + + A T+T TL + ++K ++VQKE+ V+ DD +
Sbjct: 267 QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAK 326
Query: 234 LEYLKAVVKETMRFQPAGQFLLRET-TEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKP 292
+ Y AV+ E R F + T T+ GY IP T VF + + D + ++ P
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386
Query: 293 DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMP 350
+ F P F+ +N + +N F+PF G+RIC G IA + L +L F P
Sbjct: 387 NTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 133/298 (44%), Gaps = 17/298 (5%)
Query: 62 TLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRLFFKDCLPFVGCWLDSLTGW 121
++ NII + FGKRF D RL +F ++ +++ + F G +L G
Sbjct: 154 SITSNIICSIVFGKRF-DYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSG-FLKYFPGT 211
Query: 122 NRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLAEMKT--ADDHQTF-- 174
+R++ N + + Q +E H LDP P+ D IDV L M+ +D F
Sbjct: 212 HRQIYRNLQEINTFIGQSVEKHRATLDPSNPR-----DFIDVYLLRMEKDKSDPSSEFHH 266
Query: 175 -DSIKSTIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQR 233
+ I + + A T+T TL + ++K ++VQKE+ V+ DD +
Sbjct: 267 QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAK 326
Query: 234 LEYLKAVVKETMRFQPAGQFLLRET-TEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKP 292
+ Y AV+ E R F + T T+ GY IP T VF + + D + ++ P
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386
Query: 293 DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMP 350
+ F P F+ +N + +N F+PF G+RIC G IA + L +L F P
Sbjct: 387 NTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 24/229 (10%)
Query: 138 QLIEDH---LDPKRPKVAEQEDLIDVLLAEMKTA--DDHQTFD--SIKSTIMENIAA-TD 189
+L+ +H DP +P DL + LAEM+ A + +F+ +++ + + +A
Sbjct: 231 ELLTEHRMTWDPAQPP----RDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMV 286
Query: 190 TIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKETMRFQ- 248
T TL W + ++ + + ++VQ+E+ V+ + D + Y AV+ E RF
Sbjct: 287 TTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGD 346
Query: 249 --PAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNID 306
P G + T+ + G+ IP TT+ N+ ++ +D VW+KP F PE F +D
Sbjct: 347 IVPLG--VTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHF----LD 400
Query: 307 MGGQNFE---FIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHG 352
G + F+PF AGRR C G P+A + L +LL F + +P G
Sbjct: 401 AQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTG 449
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 135/298 (45%), Gaps = 17/298 (5%)
Query: 62 TLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRLFFKDCLPFVGCWLDSLTGW 121
++ NII + FGKRF D RL +F ++ +++ + F G +L G
Sbjct: 154 SITSNIICSIVFGKRF-DYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSG-FLKYFPGT 211
Query: 122 NRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLAEMKT--ADDHQTF-- 174
+R++ N + + Q +E H LDP P+ D IDV L M+ +D F
Sbjct: 212 HRQIYRNLQEINTFIGQSVEKHRATLDPSNPR-----DFIDVYLLRMEKDKSDPSSEFHH 266
Query: 175 DSIKSTIMENIAA-TDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQR 233
++ T++ AA T+T TL + ++K ++VQKE+ V+ DD +
Sbjct: 267 QNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAK 326
Query: 234 LEYLKAVVKETMRFQPAGQFLLRET-TEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKP 292
+ Y AV+ E R F + T T+ GY IP T VF + + D + ++ P
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386
Query: 293 DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMP 350
+ F P F+ +N + +N F+PF G+RIC G IA + L +L F P
Sbjct: 387 NTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 151/311 (48%), Gaps = 38/311 (12%)
Query: 60 AMTLIRNIIFRVG--FGKRFEDEGTAAVSRLHSVFAETQAMVGR--LFFKDCLPFVGCWL 115
+TL+R ++ R + +A V ++ F QA++ + +FFK
Sbjct: 187 VLTLLRRVMLDTSNTLFLRIPLDESAIVVKIQGYFDAWQALLIKPDIFFK---------- 236
Query: 116 DSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDL-------IDVLLAEMKTA 168
W L + K + IE + KR +++ +E L +++LAE K
Sbjct: 237 ---ISW---LYKKYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELILAE-KRG 289
Query: 169 DDHQTFDSIKSTIMEN-IAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVD 227
D T +++ I+E IAA DT+ V+L + + + K+ + + KE++ V+ ++ +
Sbjct: 290 D--LTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERD-IK 346
Query: 228 EDDLQRLEYLKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQ 287
DD+Q+L+ ++ + E+MR+QP ++R+ E VIDGY + T + +N+ + R +
Sbjct: 347 IDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHRL-E 405
Query: 288 VWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDW 347
+ KP+EF E F N+ F PFG G R CAG IAM +++ L LL +F
Sbjct: 406 FFPKPNEFTLENF-AKNVPYR----YFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHV 460
Query: 348 KMPHGMKIDDL 358
K G ++ +
Sbjct: 461 KTLQGQCVESI 471
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 143/314 (45%), Gaps = 26/314 (8%)
Query: 66 NIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRLFFKDCLPFVGCWLDSLTGWNRRL 125
N+I V F KRF+ + ++ L F E ++ + + C F +D G + ++
Sbjct: 158 NVICSVVFQKRFDYKDQNFLT-LMKRFNENFRILNSPWIQVCNNF-PLLIDCFPGTHNKV 215
Query: 126 RNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLAEMKTADDHQ----TFDSIK 178
N + ++ +++H LD P+ D ID L +M+ D+Q +++
Sbjct: 216 LKNVALTRSYIREKVKEHQASLDVNNPR-----DFIDCFLIKMEQEKDNQKSEFNIENLV 270
Query: 179 STIME-NIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYL 237
T+ + +A T+T TL + + L+K+ E KVQ+E+ +V+ D + Y
Sbjct: 271 GTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYT 330
Query: 238 KAVVKETMRFQ---PAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDE 294
AVV E R+ P G + T Y IP TT+ + ++ D + + P+
Sbjct: 331 DAVVHEIQRYSDLVPTG--VPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNI 388
Query: 295 FIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMK 354
F P F+ N + ++ F+PF AG+RICAG +A + L L +L F+ K
Sbjct: 389 FDPGHFLDKNGNFKKSDY-FMPFSAGKRICAGEGLARMELFLFLTTILQNFNLK-----S 442
Query: 355 IDDLDFEATPGLTQ 368
+DDL T +T+
Sbjct: 443 VDDLKNLNTTAVTK 456
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 112/248 (45%), Gaps = 17/248 (6%)
Query: 113 CWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQ 172
W D + W+ + YQ L + E + +L +K+ +
Sbjct: 224 TWRDHVAAWDTIFNKAEKYTEIFYQDLR---------RKTEFRNYPGILYCLLKS--EKM 272
Query: 173 TFDSIKSTIMENIAA-TDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDL 231
+ +K+ I E +A +T +TL+W + + ++ + +++EV + L
Sbjct: 273 LLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDISKML 332
Query: 232 QRLEYLKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDK 291
Q + LKA +KET+R P L R V+ Y IPAKT V V + A+GRD +
Sbjct: 333 QMVPLLKASIKETLRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSS 392
Query: 292 PDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPH 351
PD+F P R++ + D+ +F + FG G R C G IA + L L ++L F +M H
Sbjct: 393 PDKFDPTRWLSKDKDL--IHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVEMQH 450
Query: 352 GMKIDDLD 359
I D+D
Sbjct: 451 ---IGDVD 455
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 130/308 (42%), Gaps = 27/308 (8%)
Query: 59 IAMTLIRNIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRLFFKDCLPFVGCWLDSL 118
+ + + N++ V FG R+ + L S E VG D +P WL
Sbjct: 156 LTVVAVANVMSAVCFGCRYSHD-DPEFRELLSHNEEFGRTVGAGSLVDVMP----WLQYF 210
Query: 119 TGWNRRLRNNFSDCDKVYQQLIED----HLDPKRPKVAEQEDLID--VLLAEMKTADDHQ 172
R + F ++ + I D H + RP A + D++D +L AE K A D
Sbjct: 211 PNPVRTVFREFEQLNRNFSNFILDKFLRHCESLRPGAAPR-DMMDAFILSAEKKAAGDSH 269
Query: 173 T------FDSIKSTIMENIAAT-DTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGF 225
+++ +TI + A+ DT+ L+W + + + +VQ E+ VV
Sbjct: 270 GGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRL 329
Query: 226 VDEDDLQRLEYLKAVVKETMRFQPAGQFLL-RETTEKCVIDGYHIPAKTTVFVNVLAIGR 284
D L Y+ A + E MRF + TT + GYHIP T VFVN ++
Sbjct: 330 PCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNH 389
Query: 285 DGQVWDKPDEFIPERFVGS----NIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALAN 340
D W P+ F P RF+ N D+ + + F G+R C G ++ + L ++
Sbjct: 390 DPLKWPNPENFDPARFLDKDGLINKDLTSR---VMIFSVGKRRCIGEELSKMQLFLFISI 446
Query: 341 LLYKFDWK 348
L ++ D++
Sbjct: 447 LAHQCDFR 454
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 144/314 (45%), Gaps = 33/314 (10%)
Query: 66 NIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRLFFKDCLPFVGCWLDSLTGWNRRL 125
N+I + F KRF+ + ++ + + E ++ + + C F +D G + +L
Sbjct: 159 NVICSIIFHKRFDYKDQQFLNLMEKL-NENIKILSSPWIQICNNF-SPIIDYFPGTHNKL 216
Query: 126 RNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLAEMKTADDHQ----TFDSIK 178
N + + +++H +D P +D ID L +M+ +Q T +S++
Sbjct: 217 LKNVAFMKSYILEKVKEHQESMDMNNP-----QDFIDCFLMKMEKEKHNQPSEFTIESLE 271
Query: 179 STIMENIAA-TDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYL 237
+T ++ A T+T TL +A+ L+K+ E KVQ+E+ V+ D + Y
Sbjct: 272 NTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYT 331
Query: 238 KAVVKETMRF---QPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDE 294
AVV E R+ P L T Y IP TT+ +++ ++ D + + P+
Sbjct: 332 DAVVHEVQRYIDLLPTS--LPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEM 389
Query: 295 FIPERFVGSNIDMGGQNFE----FIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMP 350
F P F +D GG NF+ F+PF AG+RIC G +A + L L ++L F+ K
Sbjct: 390 FDPHHF----LDEGG-NFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLK-- 442
Query: 351 HGMKIDDLDFEATP 364
+D + + TP
Sbjct: 443 --SLVDPKNLDTTP 454
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 89/176 (50%), Gaps = 2/176 (1%)
Query: 186 AATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKETM 245
A +T ++W + L+ N + KK+ +E+ V D RL L+A ++E +
Sbjct: 284 AGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVL 343
Query: 246 RFQPAGQFLL-RETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG-S 303
R +P L+ + I + + T V +N+ A+ + + W +PD+F+PERF+ +
Sbjct: 344 RLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPA 403
Query: 304 NIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDDLD 359
+ + ++PFGAG R C G +A + L +A LL +FD ++P ++ L+
Sbjct: 404 GTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLE 459
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 123/265 (46%), Gaps = 31/265 (11%)
Query: 115 LDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLAEMKTADDH 171
LD G + +L N + + +++H +D P +D ID L +M+ +
Sbjct: 204 LDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNNP-----QDFIDCFLMKMEKEKHN 258
Query: 172 Q----TFDSIKSTIMENIAA-TDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFV 226
Q T +S+++T ++ A T+T TL +A+ L+K+ E KVQ+E+ V+
Sbjct: 259 QPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSP 318
Query: 227 DEDDLQRLEYLKAVVKETMRF---QPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIG 283
D + Y AVV E R+ P L T Y IP TT+ +++ ++
Sbjct: 319 CMQDRSHMPYTDAVVHEVQRYIDLLPTS--LPHAVTCDIKFRNYLIPKGTTILISLTSVL 376
Query: 284 RDGQVWDKPDEFIPERFVGSNIDMGGQNFE----FIPFGAGRRICAGSPIAMPIVELALA 339
D + + P+ F P F +D GG NF+ F+PF AG+RIC G +A + L L
Sbjct: 377 HDNKEFPNPEMFDPHHF----LDEGG-NFKKSKYFMPFSAGKRICVGEALAGMELFLFLT 431
Query: 340 NLLYKFDWKMPHGMKIDDLDFEATP 364
++L F+ K +D + + TP
Sbjct: 432 SILQNFNLK----SLVDPKNLDTTP 452
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 106/240 (44%), Gaps = 13/240 (5%)
Query: 113 CWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQ 172
W D + W+ FS D +Y Q L R K + D +L + D
Sbjct: 219 TWKDHVAAWDVI----FSKAD-IYTQNFYWEL---RQKGSVHHDYRGILYRLL--GDSKM 268
Query: 173 TFDSIKSTIMENIAA-TDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDL 231
+F+ IK+ + E +A DT +TL+W + + +N + ++ EV L
Sbjct: 269 SFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATML 328
Query: 232 QRLEYLKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDK 291
Q + LKA +KET+R P L R V+ Y IPAKT V V + A+GR+ +
Sbjct: 329 QLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFD 388
Query: 292 PDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPH 351
P+ F P R++ D F + FG G R C G IA + + L N+L F ++ H
Sbjct: 389 PENFDPTRWLSK--DKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQH 446
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 106/240 (44%), Gaps = 13/240 (5%)
Query: 113 CWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQ 172
W D + W+ FS D +Y Q L R K + D +L + D
Sbjct: 222 TWKDHVAAWDVI----FSKAD-IYTQNFYWEL---RQKGSVHHDYRGILYRLL--GDSKM 271
Query: 173 TFDSIKSTIMENIAA-TDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDL 231
+F+ IK+ + E +A DT +TL+W + + +N + ++ EV L
Sbjct: 272 SFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATML 331
Query: 232 QRLEYLKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDK 291
Q + LKA +KET+R P L R V+ Y IPAKT V V + A+GR+ +
Sbjct: 332 QLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFD 391
Query: 292 PDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPH 351
P+ F P R++ D F + FG G R C G IA + + L N+L F ++ H
Sbjct: 392 PENFDPTRWLSK--DKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQH 449
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 134/313 (42%), Gaps = 35/313 (11%)
Query: 64 IRNIIFRVGFGKRFEDEGTAAVSRLHSV---FAETQAMVGRLFFKDCLPFVGCWLDSLTG 120
+ N+I + FG RF+ E +S L + F T G+L+ + L G
Sbjct: 156 VSNVISSIVFGDRFDYEDKEFLSLLRMMLGSFQFTATSTGQLY-----EMFSSVMKHLPG 210
Query: 121 WNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLAEMKTADDHQTFD-S 176
++ + + +E + LDP P+ D ID L M+ + + +
Sbjct: 211 PQQQAFKELQGLEDFIAKKVEHNQRTLDPNSPR-----DFIDSFLIRMQEEEKNPNTEFY 265
Query: 177 IKSTIMENI----AATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQ 232
+K+ +M + A T+T+ TL + LMK+ E KV +E+ V+ +D
Sbjct: 266 LKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA 325
Query: 233 RLEYLKAVVKETMRFQ---PAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVW 289
++ Y +AV+ E RF P G L + + +P T VF + ++ RD + +
Sbjct: 326 KMPYTEAVIHEIQRFGDMLPMG--LAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFF 383
Query: 290 DKPDEFIPERFVGSNIDMGGQ---NFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFD 346
P +F P+ F +D GQ + F+PF G+R C G +A + L ++ F
Sbjct: 384 SNPRDFNPQHF----LDKKGQFKKSDAFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFR 439
Query: 347 WKMPHGMKIDDLD 359
+K P K D+D
Sbjct: 440 FKSPQSPK--DID 450
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 138/310 (44%), Gaps = 25/310 (8%)
Query: 66 NIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRLFFKDCLPFVGCWLDSLTGWNRRL 125
N+I + F KRF+ + ++ + + E +V + + C F +D G + +L
Sbjct: 159 NVICSIIFQKRFDYKDQQFLNLMEKL-NENIRIVSTPWIQICNNF-PTIIDYFPGTHNKL 216
Query: 126 RNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLAEM-KTADDHQTFDSIKSTI 181
N + + + +++H +D P+ D ID L +M K + Q+ +I++ +
Sbjct: 217 LKNLAFMESDILEKVKEHQESMDINNPR-----DFIDCFLIKMEKEKQNQQSEFTIENLV 271
Query: 182 MENI----AATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYL 237
+ A T+T TL +A+ L+K+ E KVQ+E+ VV D + Y
Sbjct: 272 ITAADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYT 331
Query: 238 KAVVKETMRF---QPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDE 294
AVV E R+ P L T Y IP TT+ ++ ++ D + + P+
Sbjct: 332 DAVVHEVQRYIDLIPTS--LPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEM 389
Query: 295 FIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMK 354
F P F+ + N+ F+PF AG+RIC G +A + L L +L F+ K
Sbjct: 390 FDPRHFLDEGGNFKKSNY-FMPFSAGKRICVGEGLARMELFLFLTFILQNFNLK----SL 444
Query: 355 IDDLDFEATP 364
ID D + TP
Sbjct: 445 IDPKDLDTTP 454
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Query: 185 IAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGF---VDEDDLQRLEYLKAVV 241
I T+T TL WA+ L+ + E +++Q+E+ + V D RL L A +
Sbjct: 289 IGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNATI 348
Query: 242 KETMRFQPAGQFLL-RETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERF 300
E +R +P L TT I GY IP V N+ D VW++P EF P+RF
Sbjct: 349 AEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRF 408
Query: 301 VGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKF 345
+ G N + FG G R+C G +A + + LA LL F
Sbjct: 409 LEP-----GANPSALAFGCGARVCLGESLARLELFVVLARLLQAF 448
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 17/230 (7%)
Query: 122 NRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIKSTI 181
NRR + +D + ++I + +R + +DL+ LL D I +
Sbjct: 213 NRRFNDALADLHLLVDEIIAE----RRASGQKPDDLLTALLEAKDDNGDPIGEQEIHDQV 268
Query: 182 MENIA-ATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAV 240
+ + ++TI T+ W + L + E +++ EV V + ED +++L + V
Sbjct: 269 VAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGRPVAFED-VRKLRHTGNV 327
Query: 241 VKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWD-----KPDEF 295
+ E MR +PA L R + + GY IPA + + AI RD + +D PD +
Sbjct: 328 IVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRW 387
Query: 296 IPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKF 345
+PER +N+ + PF AG+R C +M + L A L K+
Sbjct: 388 LPER--AANV----PKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKY 431
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 126/299 (42%), Gaps = 27/299 (9%)
Query: 64 IRNIIFRVGFGKRFEDEGTAAVSRLHSV---FAETQAMVGRLFFKDCLPFVGCWLDSLTG 120
+ N+I + FG RF+ + +S L + F T G+L+ + L G
Sbjct: 156 VSNVISSIVFGDRFDYKDKEFLSLLRMMLGSFQFTSTSTGQLY-----EMFSSVMKHLPG 210
Query: 121 WNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLAEMKTADDHQTFD-S 176
++ + + +E + LDP P+ D ID L M+ + + +
Sbjct: 211 PQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPR-----DFIDSFLIRMQEEEKNPNTEFY 265
Query: 177 IKSTIMENI----AATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQ 232
+K+ +M + A T+T+ TL + LMK+ E KV +E+ V+ +D
Sbjct: 266 LKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA 325
Query: 233 RLEYLKAVVKETMRFQ---PAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVW 289
++ Y++AV+ E RF P G L R + + +P T V+ + ++ RD +
Sbjct: 326 KMPYMEAVIHEIQRFGDVIPMG--LARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFF 383
Query: 290 DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
P +F P+ F+ + F+PF G+R C G +A + L ++ F K
Sbjct: 384 SNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLK 441
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 2/218 (0%)
Query: 140 IEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIKSTIMENI-AATDTIKVTLEWA 198
+E + ++ + +ED + +LLA + + +K I+ + A +T+ L
Sbjct: 207 LEKIIKARQQQPPSEEDALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSF 266
Query: 199 MTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKETMRFQPAGQFLLRET 258
L ++ + ++V++E + + E L+++ YL V++E +R P RE
Sbjct: 267 CLLLGQHSDIRERVRQEQNKLQLSQELTAET-LKKMPYLDQVLQEVLRLIPPVGGGFREL 325
Query: 259 TEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFG 318
+ C G+H P V + D ++ P++F PERF F +PFG
Sbjct: 326 IQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFG 385
Query: 319 AGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKID 356
G R C G A ++L L+ +FDW + G ++
Sbjct: 386 GGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLE 423
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 124/299 (41%), Gaps = 27/299 (9%)
Query: 64 IRNIIFRVGFGKRFEDEGTAAVSRLH---SVFAETQAMVGRLFFKDCLPFVGCWLDSLTG 120
+ N+I + FG RF+ + +S L +F T G+L+ + L G
Sbjct: 156 VSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLY-----EMFSSVMKHLPG 210
Query: 121 WNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLAEMKTADDHQTFD-S 176
++ + + +E + LDP P+ D ID L M+ + + +
Sbjct: 211 PQQQAFQCLQGLEDFIAKKVEHNQRTLDPNSPR-----DFIDSFLIRMQEEEKNPNTEFY 265
Query: 177 IKSTIMEN----IAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQ 232
+K+ +M I T+T+ TL + LMK+ E KV +E+ V+ +D
Sbjct: 266 LKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA 325
Query: 233 RLEYLKAVVKETMRFQ---PAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVW 289
++ Y++AV+ E RF P L R + + +P T V+ + ++ RD +
Sbjct: 326 KMPYMEAVIHEIQRFGDVIPMS--LARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFF 383
Query: 290 DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
P +F P+ F+ + F+PF G+R C G +A + L ++ F K
Sbjct: 384 SNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLK 441
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 124/299 (41%), Gaps = 27/299 (9%)
Query: 64 IRNIIFRVGFGKRFEDEGTAAVSRLH---SVFAETQAMVGRLFFKDCLPFVGCWLDSLTG 120
+ N+I + FG RF+ + +S L +F T G+L+ + L G
Sbjct: 156 VSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLY-----EMFSSVMKHLPG 210
Query: 121 WNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLAEMKTADDHQTFD-S 176
++ + + +E + LDP P+ D ID L M+ + + +
Sbjct: 211 PQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPR-----DFIDSFLIRMQEEEKNPNTEFY 265
Query: 177 IKSTIMEN----IAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQ 232
+K+ +M I T+T+ TL + LMK+ E KV +E+ V+ +D
Sbjct: 266 LKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA 325
Query: 233 RLEYLKAVVKETMRFQ---PAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVW 289
++ Y++AV+ E RF P L R + + +P T V+ + ++ RD +
Sbjct: 326 KMPYMEAVIHEIQRFGDVIPMS--LARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFF 383
Query: 290 DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
P +F P+ F+ + F+PF G+R C G +A + L ++ F K
Sbjct: 384 SNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLK 441
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 124/299 (41%), Gaps = 27/299 (9%)
Query: 64 IRNIIFRVGFGKRFEDEGTAAVSRLH---SVFAETQAMVGRLFFKDCLPFVGCWLDSLTG 120
+ N+I + FG RF+ + +S L +F T G+L+ + L G
Sbjct: 156 VSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLY-----EMFSSVMKHLPG 210
Query: 121 WNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLAEMKTADDHQTFD-S 176
++ + + +E + LDP P+ D ID L M+ + + +
Sbjct: 211 PQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPR-----DFIDSFLIRMQEEEKNPNTEFY 265
Query: 177 IKSTIMEN----IAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQ 232
+K+ +M I T+T+ TL + LMK+ E KV +E+ V+ +D
Sbjct: 266 LKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA 325
Query: 233 RLEYLKAVVKETMRFQ---PAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVW 289
++ Y++AV+ E RF P L R + + +P T V+ + ++ RD +
Sbjct: 326 KMPYMEAVIHEIQRFGDVIPMS--LARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFF 383
Query: 290 DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
P +F P+ F+ + F+PF G+R C G +A + L ++ F K
Sbjct: 384 SNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLK 441
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 136/305 (44%), Gaps = 20/305 (6%)
Query: 66 NIIFRVGFGKRFEDEGTAAVSRLHSVFAETQAMVGRLFFKDCLPFVGCWLDSLTGWNRRL 125
N+I V F RF+ + + + S+ E ++G + + F LD G ++ L
Sbjct: 158 NVICSVIFHNRFDYKDEEFLKLMESL-HENVELLGTPWLQVYNNFPA-LLDYFPGIHKTL 215
Query: 126 RNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLAEMKTADDHQ-TFDSIKSTI 181
N + +++H LD P+ D ID L +M+ ++ + T +S+ +
Sbjct: 216 LKNADYIKNFIMEKVKEHQKLLDVNNPR-----DFIDCFLIKMEQENNLEFTLESLVIAV 270
Query: 182 MENIAA-TDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAV 240
+ A T+T TL +++ L+K+ E +VQ+E+ V+ D R+ Y AV
Sbjct: 271 SDLFGAGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAV 330
Query: 241 VKETMRF---QPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIP 297
+ E RF P L T Y IP T + ++ ++ D + + P F P
Sbjct: 331 IHEIQRFIDLLPTN--LPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDP 388
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKIDD 357
F+ + + ++ F+PF AG+R+C G +A + L L ++L F K+ ++ D
Sbjct: 389 GHFLDESGNFKKSDY-FMPFSAGKRMCVGEGLARMELFLFLTSILQNF--KLQSLVEPKD 445
Query: 358 LDFEA 362
LD A
Sbjct: 446 LDITA 450
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 124/299 (41%), Gaps = 27/299 (9%)
Query: 64 IRNIIFRVGFGKRFEDEGTAAVSRLH---SVFAETQAMVGRLFFKDCLPFVGCWLDSLTG 120
+ N+I + FG RF+ + +S L +F T G+L+ + L G
Sbjct: 156 VSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLY-----EMFSSVMKHLPG 210
Query: 121 WNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLAEMKTADDHQTFD-S 176
++ + + +E + LDP P+ D ID L M+ + + +
Sbjct: 211 PQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPR-----DFIDSFLIRMQEEEKNPNTEFY 265
Query: 177 IKSTIMEN----IAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQ 232
+K+ +M + T+T+ TL + LMK+ E KV +E+ V+ +D
Sbjct: 266 LKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA 325
Query: 233 RLEYLKAVVKETMRFQ---PAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVW 289
++ Y++AV+ E RF P L R + + +P T V+ + ++ RD +
Sbjct: 326 KMPYMEAVIHEIQRFGDVIPMS--LARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFF 383
Query: 290 DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
P +F P+ F+ + F+PF G+R C G +A + L ++ F K
Sbjct: 384 SNPQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLK 441
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 149 PKVAEQEDLIDVLLA-EMKTADDHQTFDSIKSTIMENI-AATDTIKVTLEWAMTNLMKNR 206
P D++DVL+A + +T + D I + + A T T W + LM++R
Sbjct: 217 PTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHR 276
Query: 207 EAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKETMRFQPAGQFLLRETTEKCVIDG 266
+A V E+ + D V L+++ L+ V+KET+R P L+R + + G
Sbjct: 277 DAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQG 336
Query: 267 YHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAG 326
+ I V + R + + P +F+P R+ + + +IPFGAGR C G
Sbjct: 337 HRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVG 396
Query: 327 SPIAMPIVELALANLLYKFDWKM 349
+ A+ ++ + LL +++++M
Sbjct: 397 AAFAIMQIKAIFSVLLREYEFEM 419
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 149 PKVAEQEDLIDVLLA-EMKTADDHQTFDSIKSTIMENI-AATDTIKVTLEWAMTNLMKNR 206
P D++DVL+A + +T + D I + + A T T W + LM++R
Sbjct: 217 PTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHR 276
Query: 207 EAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKETMRFQPAGQFLLRETTEKCVIDG 266
+A V E+ + D V L+++ L+ V+KET+R P L+R + + G
Sbjct: 277 DAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQG 336
Query: 267 YHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAG 326
+ I V + R + + P +F+P R+ + + +IPFGAGR C G
Sbjct: 337 HRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVG 396
Query: 327 SPIAMPIVELALANLLYKFDWKM 349
+ A+ ++ + LL +++++M
Sbjct: 397 AAFAIMQIKAIFSVLLREYEFEM 419
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 149 PKVAEQEDLIDVLLA-EMKTADDHQTFDSIKSTIMENI-AATDTIKVTLEWAMTNLMKNR 206
P D++DVL+A + +T + D I + + A T T W + LM++R
Sbjct: 217 PTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHR 276
Query: 207 EAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKETMRFQPAGQFLLRETTEKCVIDG 266
+A V E+ + D V L+++ L+ V+KET+R P L+R + + G
Sbjct: 277 DAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQG 336
Query: 267 YHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAG 326
+ I V + R + + P +F+P R+ + + +IPFGAGR C G
Sbjct: 337 HRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVG 396
Query: 327 SPIAMPIVELALANLLYKFDWKM 349
+ A+ ++ + LL +++++M
Sbjct: 397 AAFAIMQIKAIFSVLLREYEFEM 419
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 149 PKVAEQEDLIDVLLA-EMKTADDHQTFDSIKSTIMENI-AATDTIKVTLEWAMTNLMKNR 206
P D++DVL+A + +T + D I + + A T T W + LM++R
Sbjct: 217 PTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHR 276
Query: 207 EAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKETMRFQPAGQFLLRETTEKCVIDG 266
+A V E+ + D V L+++ L+ V+KET+R P L+R + + G
Sbjct: 277 DAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQG 336
Query: 267 YHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAG 326
+ I V + R + + P +F+P R+ + + +IPFGAGR C G
Sbjct: 337 HRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVG 396
Query: 327 SPIAMPIVELALANLLYKFDWKM 349
+ A+ ++ + LL +++++M
Sbjct: 397 AAFAIMQIKAIFSVLLREYEFEM 419
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 99/231 (42%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL +M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTQMLNGKDPETGEPLDDGNISYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA +T L +A+ L+KN ++KV +E V+ D +++L+Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + V V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 98/231 (42%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I E IA +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 4/165 (2%)
Query: 185 IAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDK-GFVDEDDLQRLEYLKAVVKE 243
+A T T W L +++ KK E + V + + D L+ L L +KE
Sbjct: 262 LAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKE 321
Query: 244 TMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGS 303
T+R +P ++R + GY IP V V+ R W + +F P+R++
Sbjct: 322 TLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQD 381
Query: 304 NIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANL--LYKFD 346
N G+ F ++PFGAGR C G A ++ + + LY+FD
Sbjct: 382 N-PASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFD 425
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 101/231 (43%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFD-----SIKST 180
+ F + KV L+ D + R EQ D LL M D +T + +I+
Sbjct: 203 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 258
Query: 181 IMENIAAT-DTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I+ +AA + L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 259 IITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 317
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P G E V+ G Y + + V + + RD +W D +EF P
Sbjct: 318 VLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 377
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 378 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 101/231 (43%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFD-----SIKST 180
+ F + KV L+ D + R EQ D LL M D +T + +I+
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 181 IMENIAAT-DTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I+ +AA + L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P G E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACEGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 203 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 258
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 259 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 317
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 318 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 377
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 378 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 205 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 260
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 261 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 319
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 320 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 379
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 380 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 205 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 260
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 261 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 319
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 320 VLNEALRLWPTSPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 379
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 380 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 203 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 258
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 259 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 317
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 318 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 377
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 378 ERFENPS---AIPQHAFKPFGNGQRACPGQQFALHEATLVLGMMLKHFDFE 425
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACIGKQFALHEATLVLGMMLKHFDFE 424
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 203 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 258
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 259 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 317
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 318 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 377
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 378 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFD-----SIKST 180
+ F + KV L+ D + R EQ D LL M D +T + +I+
Sbjct: 203 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 258
Query: 181 IMENIAAT-DTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I+ +AA + L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 259 IITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDP-VPSHKQVKQLKYVGM 317
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD VW D +EF P
Sbjct: 318 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRP 377
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 378 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 203 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 258
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 259 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 317
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 318 VLNEALRLWPTAPPFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 377
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 378 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA ++ L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 203 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 258
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA ++ L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 259 IITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 317
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 318 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 377
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 378 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA ++ L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F P+G G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPYGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 6/166 (3%)
Query: 185 IAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKET 244
IA +T L + + L+KN ++K +E V+ D +++L+Y+ V+ E
Sbjct: 269 IAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 327
Query: 245 MRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 302
+R P E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 328 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFEN 387
Query: 303 SNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
+ F PFG G+R C G A+ L L +L FD++
Sbjct: 388 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 430
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 205 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 260
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 261 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 319
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 320 VLNEALRLWPTVPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 379
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 380 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 427
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I I +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA + L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 6/166 (3%)
Query: 185 IAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKET 244
IA +T L +A+ L+KN ++K +E V+ D +++L+Y+ V+ E
Sbjct: 264 IAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 322
Query: 245 MRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 302
+R P E ++ G Y + + V + + RD VW D +EF PERF
Sbjct: 323 LRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFEN 382
Query: 303 SNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
+ F PFG G+R C G A+ L L +L FD++
Sbjct: 383 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 425
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFD-----SIKST 180
+ F + KV L+ D + R EQ D LL M D +T + +I+
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 181 IMENIAAT-DTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I+ +AA + L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA + L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA + L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA + L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I I +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I I +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 97/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F P+G G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPWGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I I +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I I +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I I +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F PFG G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F P G G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPHGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 16/231 (6%)
Query: 126 RNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIK------S 179
+ F + KV L+ D + R EQ D LL M D +T + +
Sbjct: 202 KRQFQEDIKVMNDLV-DKIIADRKASGEQSD---DLLTHMLNGKDPETGEPLDDENIRYQ 257
Query: 180 TIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKA 239
I IA +T L +A+ L+KN ++K +E V+ D +++L+Y+
Sbjct: 258 IITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGM 316
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIP 297
V+ E +R P E V+ G Y + + V + + RD +W D +EF P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWK 348
ERF + F P G G+R C G A+ L L +L FD++
Sbjct: 377 ERFENPS---AIPQHAFKPAGNGQRACIGQQFALHEATLVLGMMLKHFDFE 424
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 237 LKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFI 296
+ A+V+E +R++P + R TT+ + G IPA V VL+ RD D PD F
Sbjct: 274 IPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFD 333
Query: 297 PERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKF 345
P R G + FG G C G+P+A +AL ++ +F
Sbjct: 334 PSRKSGGAAQLS--------FGHGVHFCLGAPLARLENRVALEEIIARF 374
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 237 LKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFI 296
+ A+V+E +R++P + R TT+ + G IPA V VL+ RD D PD F
Sbjct: 294 IPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFD 353
Query: 297 PERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKF 345
P R G + FG G C G+P+A +AL ++ +F
Sbjct: 354 PSRKSGGAAQLS--------FGHGVHFCLGAPLARLENRVALEEIIARF 394
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 241 VKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERF 300
V+E R+ P G FL + V + T+V +++ D ++WD PDEF PERF
Sbjct: 280 VQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERF 339
Query: 301 VGSNIDMGGQNFEFIPFGAGR----RICAGSPIAMPIVELALANLLYKFDWKMP 350
++ F+ IP G G C G I + +++ +L L+++ ++ +P
Sbjct: 340 AEREENL----FDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVP 389
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 9/139 (6%)
Query: 231 LQRLEYLKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWD 290
+Q+ +Y + V+E RF P G ++ ++ +G P V +++ D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFGPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 327
Query: 291 KPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI----CAGSPIAMPIVELALANLLYKFD 346
P EF PERF + D +F FIP G G C G I + I+++A L+
Sbjct: 328 DPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMR 383
Query: 347 WKMP-HGMKIDDLDFEATP 364
+ +P + ID A P
Sbjct: 384 YDVPDQDLSIDFARLPALP 402
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 97/229 (42%), Gaps = 12/229 (5%)
Query: 124 RLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIKSTIME 183
R R ++ K+ ++I + K DL+ LL + + + I+
Sbjct: 205 RCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVA 264
Query: 184 NI-AATDTIKVTLEWAMTNLM--KNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAV 240
+ A T +T W+M +LM KN++ + K+ KE+ + ++ + + + +
Sbjct: 265 AMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLNY--DNVMDEMPFAERC 322
Query: 241 VKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERF 300
V+E++R P ++R + + Y +P + + L D + + P + PER
Sbjct: 323 VRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER- 381
Query: 301 VGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKM 349
+D FI FGAG C G A+ V+ LA ++D+++
Sbjct: 382 -DEKVDGA-----FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQL 424
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 21/159 (13%)
Query: 185 IAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKET 244
+AAT+ TL + +L+ N E M V + D+ V + ET
Sbjct: 268 LAATEPADKTLALMIYHLLNNPEQMNDV-------LADRSLVPR-----------AIAET 309
Query: 245 MRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEF-IPERFVGS 303
+R++P Q + R+ ++ V+ G I T VF + A RD + +++PD F I +G
Sbjct: 310 LRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGI 369
Query: 304 NIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLL 342
G + FG+G C G+ A +E+ +AN++
Sbjct: 370 KSAFSGAA-RHLAFGSGIHNCVGTAFAKNEIEI-VANIV 406
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 97/229 (42%), Gaps = 12/229 (5%)
Query: 124 RLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIKSTIME 183
R R ++ K+ ++I + K DL+ LL + + + I+
Sbjct: 199 RCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVA 258
Query: 184 NI-AATDTIKVTLEWAMTNLM--KNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAV 240
+ A T +T W+M +LM KN++ + K+ KE+ + ++ + + + +
Sbjct: 259 AMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLNY--DNVMDEMPFAERC 316
Query: 241 VKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERF 300
V+E++R P ++R + + Y +P + + L D + + P + PER
Sbjct: 317 VRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER- 375
Query: 301 VGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKM 349
+D FI FGAG C G A+ V+ LA ++D+++
Sbjct: 376 -DEKVDGA-----FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQL 418
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 77/166 (46%), Gaps = 10/166 (6%)
Query: 186 AATDTIKVTLEWAMTNLM--KNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKE 243
A T +T W++ +LM +N+ + K+ +E+ + ++ ++ + + + +E
Sbjct: 263 AGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEIDEFPAQLNY--DNVMEEMPFAEQCARE 320
Query: 244 TMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGS 303
++R P L+R+ + + Y +P + + L +D + + P E+ PER
Sbjct: 321 SIRRDPPLVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPER---- 376
Query: 304 NIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKM 349
+M + F FGAG C G + V+ LA +L +D+++
Sbjct: 377 --NMKLVDGAFCGFGAGVHKCIGEKFGLLQVKTVLATVLRDYDFEL 420
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 97/229 (42%), Gaps = 12/229 (5%)
Query: 124 RLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIKSTIME 183
R R ++ K+ ++I + K DL+ LL + + + I+
Sbjct: 214 RCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVA 273
Query: 184 NI-AATDTIKVTLEWAMTNLM--KNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAV 240
+ A T +T W+M +LM KN++ + K+ KE+ + ++ + + + +
Sbjct: 274 AMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLNY--DNVMDEMPFAERC 331
Query: 241 VKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERF 300
V+E++R P ++R + + Y +P + + L D + + P + PER
Sbjct: 332 VRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER- 390
Query: 301 VGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKM 349
+D FI FGAG C G A+ V+ LA ++D+++
Sbjct: 391 -DEKVDGA-----FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQL 433
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Query: 238 KAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIP 297
AV++ETMR+ P Q + R + I + +P T+ + + A RD + PD F P
Sbjct: 290 SAVIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDP 349
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKF 345
+R + FG G C G+P+A +AL L +F
Sbjct: 350 DR----------AQIRHLGFGKGAHFCLGAPLARLEATVALPALAARF 387
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 116/268 (43%), Gaps = 44/268 (16%)
Query: 127 NNFSDCDKVYQQLIED---HL----DPKRPKVAE---------QEDLIDVLLAEMKTADD 170
+NF DKV+ L+ H+ R K+AE +E + +++ M D
Sbjct: 190 DNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRESISELISLRMFLNDT 249
Query: 171 HQTFDSIKSTIMENI----AATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKG-- 224
TFD ++ + + +TI T W++ +++N EAMK +EV+ +++ G
Sbjct: 250 LSTFDDLEKAKTHLVVLWASQANTIPATF-WSLFQMIRNPEAMKAATEEVKRTLENAGQK 308
Query: 225 --------FVDEDDLQRLEYLKAVVKETMRFQPAGQFLLRETTEKCVI---DG-YHIPAK 272
+ + +L L L +++KE++R A +R E + DG Y+I
Sbjct: 309 VSLEGNPICLSQAELNDLPVLDSIIKESLRLSSAS-LNIRTAKEDFTLHLEDGSYNIRKD 367
Query: 273 TTVFVNVLAIGRDGQVWDKPDEFIPERFVGSN--------IDMGGQNFEFIPFGAGRRIC 324
+ + + D +++ P F +R++ N + + ++PFG+G IC
Sbjct: 368 DIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATIC 427
Query: 325 AGSPIAMPIVELALANLLYKFDWKMPHG 352
G A+ ++ L +L F+ ++ G
Sbjct: 428 PGRLFAIHEIKQFLILMLSYFELELIEG 455
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 116/268 (43%), Gaps = 44/268 (16%)
Query: 127 NNFSDCDKVYQQLIED---HL----DPKRPKVAE---------QEDLIDVLLAEMKTADD 170
+NF DKV+ L+ H+ R K+AE +E + +++ M D
Sbjct: 190 DNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRESISELISLRMFLNDT 249
Query: 171 HQTFDSIKSTIMENI----AATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKG-- 224
TFD ++ + + +TI T W++ +++N EAMK +EV+ +++ G
Sbjct: 250 LSTFDDLEKAKTHLVVLWASQANTIPATF-WSLFQMIRNPEAMKAATEEVKRTLENAGQK 308
Query: 225 --------FVDEDDLQRLEYLKAVVKETMRFQPAGQFLLRETTEKCVI---DG-YHIPAK 272
+ + +L L L +++KE++R A +R E + DG Y+I
Sbjct: 309 VSLEGNPICLSQAELNDLPVLDSIIKESLRLSSAS-LNIRTAKEDFTLHLEDGSYNIRKD 367
Query: 273 TTVFVNVLAIGRDGQVWDKPDEFIPERFVGSN--------IDMGGQNFEFIPFGAGRRIC 324
+ + + D +++ P F +R++ N + + ++PFG+G IC
Sbjct: 368 DIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATIC 427
Query: 325 AGSPIAMPIVELALANLLYKFDWKMPHG 352
G A+ ++ L +L F+ ++ G
Sbjct: 428 PGRLFAIHEIKQFLILMLSYFELELIEG 455
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 237 LKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFI 296
LKAV +E +RF P +R T EK I I V V + + RD +V+ PD FI
Sbjct: 241 LKAV-EEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFI 299
Query: 297 PERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKF 345
P+R ++ FG+G +C G+P+A +AL KF
Sbjct: 300 PDRTPNPHLS----------FGSGIHLCLGAPLARLEARIALEEFAKKF 338
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 231 LQRLEYLKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWD 290
+Q+ +Y + V+E RF P ++ ++ +G P V +++ D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 319
Query: 291 KPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI----CAGSPIAMPIVELALANLLYKFD 346
P EF PERF + D +F FIP G G C G I + I+++A L+
Sbjct: 320 DPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMR 375
Query: 347 WKMP-HGMKIDDLDFEATP 364
+ +P + ID A P
Sbjct: 376 YDVPDQDLSIDFARLPALP 394
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 231 LQRLEYLKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWD 290
+Q+ +Y + V+E RF P ++ ++ +G P V +++ D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 327
Query: 291 KPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI----CAGSPIAMPIVELALANLLYKFD 346
P EF PERF + D +F FIP G G C G I + I+++A L+
Sbjct: 328 DPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMR 383
Query: 347 WKMP-HGMKIDDLDFEATP 364
+ +P + ID A P
Sbjct: 384 YDVPDQDLSIDFARLPALP 402
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 231 LQRLEYLKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWD 290
+Q+ +Y + V+E RF P ++ ++ +G P V +++ D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 319
Query: 291 KPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI----CAGSPIAMPIVELALANLLYKFD 346
P EF PERF + D +F FIP G G C G I + I+++A L+
Sbjct: 320 DPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMR 375
Query: 347 WKMP-HGMKIDDLDFEATP 364
+ +P + ID A P
Sbjct: 376 YDVPDQDLSIDFARLPALP 394
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 231 LQRLEYLKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWD 290
+Q+ +Y + V+E RF P ++ ++ +G P V +++ D W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 319
Query: 291 KPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI----CAGSPIAMPIVELALANLLYKFD 346
P EF PERF + D +F FIP G G C G I + I+++A L+
Sbjct: 320 DPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMR 375
Query: 347 WKMP-HGMKIDDLDFEATP 364
+ +P + ID A P
Sbjct: 376 YDVPDQDLSIDFARLPALP 394
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 231 LQRLEYLKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWD 290
+Q+ +Y + V+E RF P ++ ++ +G P V +++ D W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 327
Query: 291 KPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI----CAGSPIAMPIVELALANLLYKFD 346
P EF PERF + D +F FIP G G C G I + I+++A L+
Sbjct: 328 DPQEFRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMR 383
Query: 347 WKMP-HGMKIDDLDFEATP 364
+ +P + ID A P
Sbjct: 384 YDVPDQDLSIDFARLPALP 402
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 97/232 (41%), Gaps = 18/232 (7%)
Query: 124 RLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIKSTIME 183
R ++ K+ ++I + + K + DL+ LL+ + + + I+
Sbjct: 202 RCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVA 261
Query: 184 NI-AATDTIKVTLEWAMTNLM-----KNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYL 237
+ A T +T W+M +LM K+ EA++K +E + +DE + +
Sbjct: 262 AMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFA 316
Query: 238 KAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIP 297
+ +E++R P L+R+ + Y +P + + L D + + +P + P
Sbjct: 317 ERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDP 376
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKM 349
ER + + G FI FGAG C G + V+ LA +D+++
Sbjct: 377 ER----DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 421
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 97/232 (41%), Gaps = 18/232 (7%)
Query: 124 RLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIKSTIME 183
R ++ K+ ++I + + K + DL+ LL+ + + + I+
Sbjct: 201 RCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVA 260
Query: 184 NI-AATDTIKVTLEWAMTNLM-----KNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYL 237
+ A T +T W+M +LM K+ EA++K +E + +DE + +
Sbjct: 261 AMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFA 315
Query: 238 KAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIP 297
+ +E++R P L+R+ + Y +P + + L D + + +P + P
Sbjct: 316 ERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDP 375
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKM 349
ER + + G FI FGAG C G + V+ LA +D+++
Sbjct: 376 ER----DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 420
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 97/232 (41%), Gaps = 18/232 (7%)
Query: 124 RLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIKSTIME 183
R ++ K+ ++I + + K + DL+ LL+ + + + I+
Sbjct: 214 RCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVA 273
Query: 184 NI-AATDTIKVTLEWAMTNLM-----KNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYL 237
+ A T +T W+M +LM K+ EA++K +E + +DE + +
Sbjct: 274 AMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFA 328
Query: 238 KAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIP 297
+ +E++R P L+R+ + Y +P + + L D + + +P + P
Sbjct: 329 ERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDP 388
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKM 349
ER + + G FI FGAG C G + V+ LA +D+++
Sbjct: 389 ER----DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 433
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 97/232 (41%), Gaps = 18/232 (7%)
Query: 124 RLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIKSTIME 183
R ++ K+ ++I + + K + DL+ LL+ + + + I+
Sbjct: 201 RCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVA 260
Query: 184 NI-AATDTIKVTLEWAMTNLM-----KNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYL 237
+ A T +T W+M +LM K+ EA++K +E + +DE + +
Sbjct: 261 AMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFA 315
Query: 238 KAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIP 297
+ +E++R P L+R+ + Y +P + + L D + + +P + P
Sbjct: 316 ERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDP 375
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKM 349
ER + + G FI FGAG C G + V+ LA +D+++
Sbjct: 376 ER----DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 420
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 97/232 (41%), Gaps = 18/232 (7%)
Query: 124 RLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIKSTIME 183
R ++ K+ ++I + + K + DL+ LL+ + + + I+
Sbjct: 200 RCHEARTELQKILSEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVA 259
Query: 184 NI-AATDTIKVTLEWAMTNLM-----KNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYL 237
+ A T +T W+M +LM K+ EA++K +E + +DE + +
Sbjct: 260 AMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFA 314
Query: 238 KAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIP 297
+ +E++R P L+R+ + Y +P + + L D + + +P + P
Sbjct: 315 ERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDP 374
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKM 349
ER + + G FI FGAG C G + V+ LA +D+++
Sbjct: 375 ER----DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQL 419
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPER 299
VV+E +R+ +LR TT I+G +P+ T V + A RD +D PD F+P R
Sbjct: 290 VVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGR 349
Query: 300 FVGSNIDMGGQNFEFIPFGAGRRICAGSPIA---MPIVELALANLLYKFD 346
+ I FG G C GS +A + +V LA + + D
Sbjct: 350 ----------KPNRHITFGHGMHHCLGSALARIELSVVLRVLAERVSRVD 389
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 18/206 (8%)
Query: 150 KVAEQEDLIDVLLAEMKTADDHQTFDSIKSTIMENI-AATDTIKVTLEWAMTNLM----- 203
K + DL+ LL+ + + + I+ + A T +T W+M +LM
Sbjct: 240 KDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANV 299
Query: 204 KNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKETMRFQPAGQFLLRETTEKCV 263
K+ EA++K +E + +DE + + + +E++R P L+R+
Sbjct: 300 KHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERCARESIRRDPPLLMLMRKVMADVK 354
Query: 264 IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRI 323
+ Y +P + + L D + + +P + PER + + G FI FGAG
Sbjct: 355 VGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER----DEKVEGA---FIGFGAGVHK 407
Query: 324 CAGSPIAMPIVELALANLLYKFDWKM 349
C G + V+ LA +D+++
Sbjct: 408 CIGQKFGLLQVKTILATAFRSYDFQL 433
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 11/153 (7%)
Query: 205 NREAMKKVQKEVRYVVKDKGF-VDEDDLQRLEYLKAVVKETMRFQPAGQFLLRETTEKCV 263
+ ++ +E+R V+K G + ++++E K+VV E +RF+P + V
Sbjct: 314 GHQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLV 373
Query: 264 ID----GYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNID------MGGQNFE 313
I+ + + A ++ RD +++D+ DEF+PERFVG + + E
Sbjct: 374 IESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPE 433
Query: 314 FIPFGAGRRICAGSPIAMPIVELALANLLYKFD 346
G + CAG + + L + + ++D
Sbjct: 434 TETPTVGNKQCAGKDFVVLVARLFVIEIFRRYD 466
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 11/153 (7%)
Query: 205 NREAMKKVQKEVRYVVKDKGF-VDEDDLQRLEYLKAVVKETMRFQPAGQFLLRETTEKCV 263
+ ++ +E+R V+K G + ++++E K+VV E +RF+P + V
Sbjct: 314 GHQVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLV 373
Query: 264 ID----GYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNID------MGGQNFE 313
I+ + + A ++ RD +++D+ DEF+PERFVG + + E
Sbjct: 374 IESHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPE 433
Query: 314 FIPFGAGRRICAGSPIAMPIVELALANLLYKFD 346
G + CAG + + L + + ++D
Sbjct: 434 TETPTVGNKQCAGKDFVVLVARLFVIEIFRRYD 466
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 79/197 (40%), Gaps = 29/197 (14%)
Query: 150 KVAEQED-LIDVLLAEMKTADDHQTFDSIKSTIMENIAATDTIKVTLEWAMTNLMKNREA 208
K AE ED L+D L+A D + + ++ +A +T + L+++ E
Sbjct: 206 KQAEPEDGLLDELIARQLEEGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPE- 264
Query: 209 MKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKETMRFQPAGQFLLRETTEKCVIDGYH 268
++ +++D G V VV+E +RF ++R E + G
Sbjct: 265 ------QIDVLLRDPGAV-----------SGVVEELLRFTSVSDHIVRMAKEDIEVGGAT 307
Query: 269 IPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSP 328
I A V V++ + RD + ++ PD F R ++ FG G C G
Sbjct: 308 IKAGDAVLVSITLMNRDAKAYENPDIFDARRNARHHVG----------FGHGIHQCLGQN 357
Query: 329 IAMPIVELALANLLYKF 345
+A +E+AL L +
Sbjct: 358 LARAELEIALGGLFARI 374
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 20/143 (13%)
Query: 236 YLKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEF 295
YLKA+ +E +R+ P +R+T E+ + I V V + + RD +V+ ++F
Sbjct: 240 YLKAI-EEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKF 298
Query: 296 IPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKI 355
IP+R ++ FG+G +C G+P+A +A+ +F I
Sbjct: 299 IPDRNPNPHLS----------FGSGIHLCLGAPLARLEARIAIEEFSKRF-------RHI 341
Query: 356 DDLDFEATPG--LTQHKKKPLKL 376
+ LD E P L +K+ ++L
Sbjct: 342 EILDTEKVPNEVLNGYKRLVVRL 364
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 18/130 (13%)
Query: 236 YLKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEF 295
YLKA+ +E +R+ P +R+T E+ + I V V + + RD +V+ ++F
Sbjct: 240 YLKAI-EEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKF 298
Query: 296 IPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKI 355
IP+R ++ FG+G +C G+P+A +A+ +F I
Sbjct: 299 IPDRNPNPHLS----------FGSGIHLCLGAPLARLEARIAIEEFSKRF-------RHI 341
Query: 356 DDLDFEATPG 365
+ LD E P
Sbjct: 342 EILDTEKVPN 351
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 88/223 (39%), Gaps = 34/223 (15%)
Query: 150 KVAEQEDLIDVLLAEMKTADDHQTFDSIKSTIMENIAATDTIKVTLEWAMTNLMKNREAM 209
+ A +DL L+ + D H T I ST+ +AA ++L + N + N
Sbjct: 206 RAAPGDDLTSALIQASENGD-HLTDAEIVSTLQLMVAAGHETTISL---IVNAVVN---- 257
Query: 210 KKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKETMRFQ-PAGQFLLRETTEKCVIDGYH 268
E R +V L AVV+ET+RF P L+R E +
Sbjct: 258 LSTHPEQRALV----------LSGEAEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRV 307
Query: 269 IPAKTTVFVNVLAIGRDGQVWDK-PDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGS 327
IPA + V+ A+GRD + D F R G+ I FG G +C G+
Sbjct: 308 IPAGDALIVSYGALGRDERAHGPTADRFDLTRTSGNR---------HISFGHGPHVCPGA 358
Query: 328 PIAMPIVELALANLLYKFDWKMPH-GMKIDDLDFEATPGLTQH 369
++ +AL L +F PH + + + P +TQ+
Sbjct: 359 ALSRMEAGVALPALYARF----PHLDLAVPAAELRNKPVVTQN 397
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 85/203 (41%), Gaps = 37/203 (18%)
Query: 154 QEDLIDVLLAEMKTADDHQTFDSIKSTIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQ 213
Q+D+I +LL + + D ++ + I+ IA +T + ++ L+++ E + K++
Sbjct: 203 QQDMISMLL-KGREKDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLR 261
Query: 214 KEVRYVVKDKGFVDEDDLQRLEYLKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKT 273
+ DL + V+E +R++ Q R +E I G I
Sbjct: 262 -------------ENPDL-----IGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGE 303
Query: 274 TVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPI 333
V++ + A RD ++ PD F D+ + FG G +C GS +A
Sbjct: 304 QVYLLLGAANRDPSIFTNPDVF----------DITRSPNPHLSFGHGHHVCLGSSLARLE 353
Query: 334 VELALANLLYK--------FDWK 348
++A+ LL + F+W+
Sbjct: 354 AQIAINTLLQRMPSLNLADFEWR 376
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 31/162 (19%)
Query: 186 AATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDE--DDLQRLEYLKAVVKE 243
A TDT + +A+ NL+++ EA++ V+ E G + D++ R E + +
Sbjct: 254 AGTDTTIYLIAFAVLNLLRSPEALELVKAE-------PGLMRNALDEVLRFENILRI--G 304
Query: 244 TMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGS 303
T+RF R+ E C G I VF+ + + RDG V+ +PD F R +
Sbjct: 305 TVRFA-------RQDLEYC---GASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDTSA 354
Query: 304 NIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKF 345
+ + +G G +C G +A E+A+ + +F
Sbjct: 355 S----------LAYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 17/185 (9%)
Query: 162 LAEMKTADDHQTFDSIKSTIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVK 221
L E+ +D H + + + ++N T K+ ++ M ++ E + + V+
Sbjct: 148 LLEIFKSDSHGIINVLAGSSLKNRKLTMDEKI--KYIMLLIIGGNETTTNLIGNMIRVID 205
Query: 222 DKGFVDEDDLQRLEYLKAVVKETMRFQPAGQFL-LRETTEKCVIDGYHIPAKTTVFVNVL 280
+ + +D L+ V+ET+R+ QFL R E I+ I V V +
Sbjct: 206 ENPDIIDDALKNRS---GFVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLG 262
Query: 281 AIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALAN 340
+ RD +D+PD F G+ + FG G +C G+P+A +AL +
Sbjct: 263 SANRDETFFDEPDLF-----------KIGRREMHLAFGIGIHMCLGAPLARLEASIALND 311
Query: 341 LLYKF 345
+L F
Sbjct: 312 ILNHF 316
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 35/164 (21%)
Query: 186 AATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDE----DDLQRLEYLKAVV 241
A TDT + +A+ NL+++ EA++ V+ E + + +DE D++ R+
Sbjct: 254 AGTDTTIYLIAFAVLNLLRSPEALELVKAEPGLM---RNALDEVLRFDNILRI------- 303
Query: 242 KETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFV 301
T+RF R+ E C G I VF+ + + RDG V+ +PD F R
Sbjct: 304 -GTVRFA-------RQDLEYC---GASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDT 352
Query: 302 GSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKF 345
++ + +G G +C G +A E+A+ + +F
Sbjct: 353 SAS----------LAYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 237 LKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFI 296
L V+E +R+ + R E+ I G IP +TV V A RD + + PD
Sbjct: 273 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQF--PD--- 327
Query: 297 PERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKID 356
P RF D+ + FG G C G P+A E+AL L +F + G+ D
Sbjct: 328 PHRF-----DVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFP-ALSLGIDAD 381
Query: 357 DL 358
D+
Sbjct: 382 DV 383
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 237 LKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFI 296
L V+E +R+ + R E+ I G IP +TV V A RD + + PD
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQF--PD--- 328
Query: 297 PERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKID 356
P RF D+ + FG G C G P+A E+AL L +F + G+ D
Sbjct: 329 PHRF-----DVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFP-ALSLGIDAD 382
Query: 357 DL 358
D+
Sbjct: 383 DV 384
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 237 LKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFI 296
L V+E +R+ + R E+ I G IP +TV V A RD + + PD
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQF--PD--- 328
Query: 297 PERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKID 356
P RF D+ + FG G C G P+A E+AL L +F + G+ D
Sbjct: 329 PHRF-----DVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFP-ALSLGIDAD 382
Query: 357 DL 358
D+
Sbjct: 383 DV 384
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 237 LKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFI 296
L V+E +R+ + R E+ I G IP +TV V A RD + + PD
Sbjct: 273 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQF--PD--- 327
Query: 297 PERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKID 356
P RF D+ + FG G C G P+A E+AL L +F + G+ D
Sbjct: 328 PHRF-----DVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFP-ALSLGIDAD 381
Query: 357 DL 358
D+
Sbjct: 382 DV 383
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 237 LKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFI 296
L V+E +R+ + R E+ I G IP +TV V A RD + + PD
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQF--PD--- 328
Query: 297 PERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKID 356
P RF D+ + FG G C G P+A E+AL L +F + G+ D
Sbjct: 329 PHRF-----DVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFP-ALSLGIDAD 382
Query: 357 DL 358
D+
Sbjct: 383 DV 384
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 52/123 (42%), Gaps = 13/123 (10%)
Query: 237 LKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFI 296
L V+E +R+ + R E+ I G IP +TV V A RD P +F
Sbjct: 273 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRD------PSQFP 326
Query: 297 -PERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPHGMKI 355
P RF D+ + FG G C G P+A E+AL L +F + G+
Sbjct: 327 DPHRF-----DVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFP-ALSLGIDA 380
Query: 356 DDL 358
DD+
Sbjct: 381 DDV 383
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 242 KETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFV 301
+E +R P L R ++ +P TT+ ++ R + + + F PERF+
Sbjct: 259 QEALRLYPPAWILTRRLERPLLLGEDRLPQGTTLVLSPYVTQR--LYFPEGEAFQPERFL 316
Query: 302 GSNIDMGGQNFEFIPFGAGRRICAGSPIAM---PIV 334
G+ F PFG G+R+C G A+ PIV
Sbjct: 317 AERGTPSGRYF---PFGLGQRLCLGRDFALLEGPIV 349
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 16/100 (16%)
Query: 242 KETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGR----DGQVWDKPDEFIP 297
+E +R P L R ++ +P TT+ ++ R DG+ F P
Sbjct: 259 QEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRLHFPDGEA------FRP 312
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAM---PIV 334
ERF+ G+ F PFG G+R+C G A+ PIV
Sbjct: 313 ERFLEERGTPSGRYF---PFGLGQRLCLGRDFALLEGPIV 349
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 239 AVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPE 298
A++ E +R P LR TE I G I A + + + A RD +V+D PD F
Sbjct: 266 AIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHT 325
Query: 299 RFVGSNIDMGGQNFEFIPFGAGRRICAGSPIA 330
R ++ ++ FG G CAG I+
Sbjct: 326 RPPAASRNLS--------FGLGPHSCAGQIIS 349
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 239 AVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPE 298
A++ E +R P LR TE I G I A + + + A RD +V+D PD F
Sbjct: 268 AIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHT 327
Query: 299 RFVGSNIDMGGQNFEFIPFGAGRRICAGSPIA 330
R ++ ++ FG G CAG I+
Sbjct: 328 RPPAASRNLS--------FGLGPHSCAGQIIS 351
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 12/108 (11%)
Query: 240 VVKETMRFQPAGQFL-LR-ETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIP 297
VV+ET+R +PA + L LR T+ + DG I + + A R + D F
Sbjct: 278 VVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDA 337
Query: 298 ERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKF 345
R V E + FG G C G+P+A V LAL +L +F
Sbjct: 338 TRTVK----------EHLAFGHGVHFCLGAPLARMEVTLALESLFGRF 375
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 11/95 (11%)
Query: 237 LKAVVKETMRF-QPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEF 295
+ + V+E +RF P Q +R T E G IPA V + + A RD +PD
Sbjct: 269 ISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRL 328
Query: 296 IPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIA 330
R D G F FG G C G+ +A
Sbjct: 329 DITR------DASGGVF----FGHGIHFCLGAQLA 353
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 11/95 (11%)
Query: 237 LKAVVKETMRF-QPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEF 295
+ + V+E +RF P Q +R T E G IPA V + + A RD +PD
Sbjct: 269 ISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRL 328
Query: 296 IPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIA 330
R D G F FG G C G+ +A
Sbjct: 329 DITR------DASGGVF----FGHGIHFCLGAQLA 353
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 76/164 (46%), Gaps = 18/164 (10%)
Query: 197 WAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKETMRFQPAGQFLLR 256
W M L+ + EA++ V++E++ K E+ + +V+ ET+R A + R
Sbjct: 275 WVMGYLLTHPEALRAVREEIQ---GGKHLRLEERQKNTPVFDSVLWETLRLT-AAALITR 330
Query: 257 ETTEK---CVIDG--YHIPAKTTVFV-NVLAIGRDGQVWDKPDEFIPERFVGSN------ 304
+ T+ C+ +G YH+ + V ++ D Q+ +P+ F +RF+ ++
Sbjct: 331 DVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKD 390
Query: 305 -IDMGGQ-NFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFD 346
G + + +P+G +C G A+ ++ + +L +FD
Sbjct: 391 FFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFD 434
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 73/168 (43%), Gaps = 22/168 (13%)
Query: 194 TLEWAMTNLMKNREAMKKVQKEVRYVVKDKG--FVDEDDLQRLEYLKAVVKETMRFQPAG 251
TL+W + ++ +E+R +K G V + ++++ K+VV E++R +P
Sbjct: 288 TLKWIG---LAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPV 344
Query: 252 QFLLRETTEKCVIDG----YHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDM 307
+ I+ + + +F +D +V+D+P+E++P+RFVG
Sbjct: 345 PPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGD---- 400
Query: 308 GGQNFEFIPFGAG---------RRICAGSPIAMPIVELALANLLYKFD 346
G +++ + G + CAG + I L + L ++D
Sbjct: 401 GEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYD 448
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 10/103 (9%)
Query: 242 KETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFV 301
+E +RF+ Q R TT + G I V + + + RD + WD PD +
Sbjct: 289 EEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRY------ 342
Query: 302 GSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYK 344
D+ + + FG+G +C G +A E+ LA L K
Sbjct: 343 ----DITRKTSGHVGFGSGVHMCVGQLVARLEGEVVLAALARK 381
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 232 QRLEYLKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDK 291
+R + L V+E +R+ P+ Q R+ + G + V V A RD + +D+
Sbjct: 261 RRPDLLAQAVEECLRYDPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDR 320
Query: 292 PDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIA 330
PD+F ER + FGAG R C GS +A
Sbjct: 321 PDDFDIER----------DPVPSMSFGAGMRYCLGSYLA 349
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 54/134 (40%), Gaps = 23/134 (17%)
Query: 234 LEYLKAVVKETMRFQ-PAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKP 292
+ L V+E +R++ P R E +DG IPA TV V VLA P
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLV-VLA-----DAHRTP 346
Query: 293 DEFI-PERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPH 351
+ F P RF D+ + FG G C G+P+A +A+ LL
Sbjct: 347 ERFPDPHRF-----DIRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLE-------- 393
Query: 352 GMKIDDLDFEATPG 365
+ DL + +PG
Sbjct: 394 --RCPDLALDVSPG 405
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 54/134 (40%), Gaps = 23/134 (17%)
Query: 234 LEYLKAVVKETMRFQ-PAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKP 292
+ L V+E +R++ P R E +DG IPA TV V VLA P
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLV-VLA-----DAHRTP 346
Query: 293 DEFI-PERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPH 351
+ F P RF D+ + FG G C G+P+A +A+ LL
Sbjct: 347 ERFPDPHRF-----DIRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLE-------- 393
Query: 352 GMKIDDLDFEATPG 365
+ DL + +PG
Sbjct: 394 --RCPDLALDVSPG 405
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 54/134 (40%), Gaps = 23/134 (17%)
Query: 234 LEYLKAVVKETMRFQ-PAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKP 292
+ L V+E +R++ P R E +DG IPA TV V VLA P
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLV-VLA-----DAHRTP 346
Query: 293 DEFI-PERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFDWKMPH 351
+ F P RF D+ + FG G C G+P+A +A+ LL
Sbjct: 347 ERFPDPHRF-----DIRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLE-------- 393
Query: 352 GMKIDDLDFEATPG 365
+ DL + +PG
Sbjct: 394 --RCPDLALDVSPG 405
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 45/112 (40%), Gaps = 11/112 (9%)
Query: 235 EYLKAVVKETMRF-QPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPD 293
E + VV E +R+ P R + VIDG I A V ++L RD + PD
Sbjct: 276 EKAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPD 335
Query: 294 EFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKF 345
R S++ FG G C G+ +A ++ +A L +F
Sbjct: 336 VLDANRAAVSDVG----------FGHGIHYCVGAALARSMLRMAYQTLWRRF 377
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 62/153 (40%), Gaps = 12/153 (7%)
Query: 195 LEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKETMRFQP--AGQ 252
L+ A+ L+ E+ + Y++ + + L R E + + V+E R+ P G
Sbjct: 245 LDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPELIPSAVEELTRWVPLGVGT 304
Query: 253 FLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNF 312
+ R E + G I A V + A RD + D ID+
Sbjct: 305 AVPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDAD----------RIDVDRTPN 354
Query: 313 EFIPFGAGRRICAGSPIAMPIVELALANLLYKF 345
+ + FG G C G+P+A +++AL LL +
Sbjct: 355 QHLGFGHGVHHCLGAPLARVELQVALEVLLQRL 387
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 12/153 (7%)
Query: 195 LEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKETMRFQP--AGQ 252
L+ A+ L+ E+ + Y++ + + L R E + + V+E R+ P G
Sbjct: 245 LDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPELIPSAVEELTRWVPLGVGT 304
Query: 253 FLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNF 312
R E + G I A V + A RD + D ID+
Sbjct: 305 AFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDAD----------RIDVDRTPN 354
Query: 313 EFIPFGAGRRICAGSPIAMPIVELALANLLYKF 345
+ + FG G C G+P+A +++AL LL +
Sbjct: 355 QHLGFGHGVHHCLGAPLARVELQVALEVLLQRL 387
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 14/119 (11%)
Query: 230 DLQRLE----YLKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRD 285
+LQRL + +E +RF+ Q R TT + + G I V + + + RD
Sbjct: 271 ELQRLRSDPTLARNAFEEAVRFESPVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRD 330
Query: 286 GQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYK 344
+ W PD + D+ + + FG+G +C G +A E+ L+ L K
Sbjct: 331 PRRWSDPDLY----------DITRKTSGHVGFGSGVHMCVGQLVARLEGEVMLSALARK 379
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 10/92 (10%)
Query: 254 LLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFE 313
L R E + G I A V+V+ LA RD V+ PD ID+
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPD----------RIDLDRDPNP 345
Query: 314 FIPFGAGRRICAGSPIAMPIVELALANLLYKF 345
+ +G G C G+ +A EL + LL +
Sbjct: 346 HLAYGNGHHFCTGAVLARMQTELLVDTLLERL 377
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 12/153 (7%)
Query: 195 LEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKETMRFQP--AGQ 252
L+ A+ L+ E+ + Y++ + + L R E + + V+E R+ P G
Sbjct: 245 LDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPELIPSAVEELTRWVPLGVGT 304
Query: 253 FLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNF 312
R E + G I A V + A RD + D ID+
Sbjct: 305 AAPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDAD----------RIDVDRTPN 354
Query: 313 EFIPFGAGRRICAGSPIAMPIVELALANLLYKF 345
+ + FG G C G+P+A +++AL LL +
Sbjct: 355 QHLGFGHGVHHCLGAPLARVELQVALEVLLQRL 387
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 10/92 (10%)
Query: 254 LLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFE 313
L R E + G I A V+V+ LA RD V+ PD ID+
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPD----------RIDLDRDPNP 345
Query: 314 FIPFGAGRRICAGSPIAMPIVELALANLLYKF 345
+ +G G C G+ +A EL + LL +
Sbjct: 346 HLAYGNGHHFCTGAVLARMQTELLVDTLLERL 377
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 43/112 (38%), Gaps = 18/112 (16%)
Query: 235 EYLKAVVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDE 294
E A V+E MR+ P Q + R E + + IP + V + + RD + PD
Sbjct: 285 ESTPAAVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDV 344
Query: 295 F----IPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLL 342
ER VG FG G C G+ +A E+ L LL
Sbjct: 345 LDVHRAAERQVG--------------FGLGIHYCLGATLARAEAEIGLRALL 382
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 78/194 (40%), Gaps = 32/194 (16%)
Query: 162 LAEMKTADDHQTFDSIKSTIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYV-- 219
L EM +++ Q ++ +++ A + W + L+KN EA+ V+ E+ +
Sbjct: 241 LEEMGVSEEMQA----RALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILW 296
Query: 220 -----VKDKGFVDEDDLQRLEYLKAVVKETMRFQPAGQFLLRETTEKCVI---DGYHIPA 271
V + + L L +V+ E++R A F+ RE + DG
Sbjct: 297 QAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLT-AAPFITREVVVDLAMPMADGREFNL 355
Query: 272 K---TTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEF-----------IPF 317
+ + L+ RD +++ P+ F RF+ + G + +F +P+
Sbjct: 356 RRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPD---GSEKKDFYKDGKRLKNYNMPW 412
Query: 318 GAGRRICAGSPIAM 331
GAG C G A+
Sbjct: 413 GAGHNHCLGRSYAV 426
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 78/194 (40%), Gaps = 32/194 (16%)
Query: 162 LAEMKTADDHQTFDSIKSTIMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYV-- 219
L EM +++ Q ++ +++ A + W + L+KN EA+ V+ E+ +
Sbjct: 253 LEEMGVSEEMQA----RALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILW 308
Query: 220 -----VKDKGFVDEDDLQRLEYLKAVVKETMRFQPAGQFLLRETTEKCVI---DGYHIPA 271
V + + L L +V+ E++R A F+ RE + DG
Sbjct: 309 QAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLT-AAPFITREVVVDLAMPMADGREFNL 367
Query: 272 K---TTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEF-----------IPF 317
+ + L+ RD +++ P+ F RF+ + G + +F +P+
Sbjct: 368 RRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPD---GSEKKDFYKDGKRLKNYNMPW 424
Query: 318 GAGRRICAGSPIAM 331
GAG C G A+
Sbjct: 425 GAGHNHCLGRSYAV 438
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 88/225 (39%), Gaps = 34/225 (15%)
Query: 121 WNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLAEMKTADDHQTFDSIKST 180
W++R + +C +Q L + ++ K P DLI +LA + + + +
Sbjct: 207 WDQR-KTELLECAAYFQVLWNERVN-KDPG----NDLIS-MLAHSPATRNMTPEEYLGNV 259
Query: 181 IMENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAV 240
++ + DT + ++ + L KN + K++ V + +
Sbjct: 260 LLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANPALV------------------ETM 301
Query: 241 VKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERF 300
V E +R+Q + R + G I V + + RD +V D+P+EFI +R
Sbjct: 302 VPEIIRWQTPLAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDR- 360
Query: 301 VGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKF 345
+ + + FG G C G+ +A + + +L +F
Sbjct: 361 --------PRPRQHLSFGFGIHRCVGNRLAEMQLRILWEEILTRF 397
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Query: 235 EYLKAVVKETMRFQPAGQFL-LRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPD 293
E V+E +R+ P R E ++G IP T VF+ RD +V+ D
Sbjct: 284 ELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADAD 343
Query: 294 EFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFD 346
F +I + + I FG G C G+ +A + A+A L + D
Sbjct: 344 RF--------DITV-KREAPSIAFGGGPHFCLGTALARLELTEAVAALATRLD 387
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Query: 235 EYLKAVVKETMRFQPAGQFL-LRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPD 293
E V+E +R+ P R E ++G IP T VF+ RD +V+ D
Sbjct: 274 ELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADAD 333
Query: 294 EFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKFD 346
F +I + + I FG G C G+ +A + A+A L + D
Sbjct: 334 RF--------DITV-KREAPSIAFGGGPHFCLGTALARLELTEAVAALATRLD 377
>pdb|2OJL|A Chain A, Crystal Structure Of Q7waf1_borpa From Bordetella
Parapertussis. Northeast Structural Genomics Target
Bpr68.
pdb|2OJL|B Chain B, Crystal Structure Of Q7waf1_borpa From Bordetella
Parapertussis. Northeast Structural Genomics Target
Bpr68
Length = 108
Score = 32.7 bits (73), Expect = 0.39, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 121 WNRRLRNNFSDCDKVYQQLIEDHLDPKRP 149
W+R + F + KV +Q + DHLDP RP
Sbjct: 63 WDREVDGGFPEA-KVLKQRVRDHLDPGRP 90
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 11/111 (9%)
Query: 235 EYLKAVVKETMR-FQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPD 293
+ + A V E +R A LR E + G +PA V + D + +D P+
Sbjct: 280 DLMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPE 339
Query: 294 EFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYK 344
+D + + FG G C G +A +E+AL LL +
Sbjct: 340 ----------RVDFHRTDNHHVAFGYGVHQCVGQHLARLELEVALETLLRR 380
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 31.6 bits (70), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 10/106 (9%)
Query: 240 VVKETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPER 299
+V E +R+ + +R + G +I + ++ + RD +V+ PDEF R
Sbjct: 303 LVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITR 362
Query: 300 FVGSNIDMGGQNFEFIPFGAGRRICAGSPIAMPIVELALANLLYKF 345
F N +G FG G +C G +A +++ LL K
Sbjct: 363 F--PNRHLG--------FGWGAHMCLGQHLAKLEMKIFFEELLPKL 398
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 10/77 (12%)
Query: 254 LLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFE 313
L R E I G I A V+V+ LA RD +V+ PD ID
Sbjct: 293 LSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----------RIDFERSPNP 342
Query: 314 FIPFGAGRRICAGSPIA 330
+ FG G C G +A
Sbjct: 343 HVSFGFGPHYCPGGMLA 359
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 12/92 (13%)
Query: 241 VKETMRFQPA--GQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPE 298
+ E +R+ P L R E I G I A V+V+ LA RD +V+ PD
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----- 332
Query: 299 RFVGSNIDMGGQNFEFIPFGAGRRICAGSPIA 330
ID + FG G C G +A
Sbjct: 333 -----RIDFERSPNPHVSFGFGPHYCPGGMLA 359
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 10/77 (12%)
Query: 254 LLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFE 313
L R E I G I A V+V+ LA RD +V+ PD ID
Sbjct: 293 LSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----------RIDFERSPNP 342
Query: 314 FIPFGAGRRICAGSPIA 330
+ FG G C G +A
Sbjct: 343 HVSFGFGPHYCPGGMLA 359
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 10/77 (12%)
Query: 254 LLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFE 313
L R E I G I A V+V+ LA RD +V+ PD ID
Sbjct: 293 LSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----------RIDFERSPNP 342
Query: 314 FIPFGAGRRICAGSPIA 330
+ FG G C G +A
Sbjct: 343 HVSFGFGPHYCPGGMLA 359
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 10/77 (12%)
Query: 254 LLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFE 313
L R E I G I A V+V+ LA RD +V+ PD ID
Sbjct: 293 LSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----------RIDFERSPNP 342
Query: 314 FIPFGAGRRICAGSPIA 330
+ FG G C G +A
Sbjct: 343 HVSFGFGPHYCPGGMLA 359
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 10/77 (12%)
Query: 254 LLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFE 313
L R E I G I A V+V+ LA RD +V+ PD ID
Sbjct: 293 LSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----------RIDFERSPNP 342
Query: 314 FIPFGAGRRICAGSPIA 330
+ FG G C G +A
Sbjct: 343 HVSFGFGPHYCPGGMLA 359
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 10/77 (12%)
Query: 254 LLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFE 313
L R E I G I A V+V+ LA RD +V+ PD ID
Sbjct: 293 LSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----------RIDFERSPNP 342
Query: 314 FIPFGAGRRICAGSPIA 330
+ FG G C G +A
Sbjct: 343 HVSFGFGPHYCPGGMLA 359
>pdb|2DMA|A Chain A, Crystal Structure Of Ph1978 From Pyrococcus Horikoshii Ot3
(Form Ii)
Length = 198
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 143 HLDPKRPKVAEQEDLIDVLLAEMK----TADDHQTFDSIKSTIMENIAATDTIKV 193
L+ +R ++A QE++I +L E+K T + + F+S+K+ + E I + KV
Sbjct: 68 RLEVRRKRLAIQEEIISSVLEEVKRRLETXSEDEYFESVKALLKEAIKELNEKKV 122
>pdb|2DM9|A Chain A, Crystal Structure Of Ph1978 From Pyrococcus Horikoshii Ot3
pdb|2DM9|B Chain B, Crystal Structure Of Ph1978 From Pyrococcus Horikoshii Ot3
Length = 198
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Query: 143 HLDPKRPKVAEQEDLIDVLLAEMK----TADDHQTFDSIKSTIMENIAATDTIKVTLEWA 198
L+ +R ++A QE++I +L E+K T + + F+S+K+ + E I + KV +
Sbjct: 68 RLEVRRKRLAIQEEIISSVLEEVKRRLETMSEDEYFESVKALLKEAIKELNEKKVRV--- 124
Query: 199 MTN 201
M+N
Sbjct: 125 MSN 127
>pdb|4DT0|A Chain A, The Structure Of The Peripheral Stalk Subunit E From
Pyrococcus Horikoshii
Length = 208
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Query: 143 HLDPKRPKVAEQEDLIDVLLAEMK----TADDHQTFDSIKSTIMENIAATDTIKVTLEWA 198
L+ +R ++A QE++I +L E+K T + + F+S+K+ + E I + KV +
Sbjct: 78 RLEVRRKRLAIQEEIISSVLEEVKRRLETMSEDEYFESVKALLKEAIKELNEKKVRV--- 134
Query: 199 MTN 201
M+N
Sbjct: 135 MSN 137
>pdb|1ZAK|A Chain A, Adenylate Kinase From Maize In Complex With The Inhibitor
P1,P5-Bis(Adenosine-5'-)pentaphosphate (Ap5a)
pdb|1ZAK|B Chain B, Adenylate Kinase From Maize In Complex With The Inhibitor
P1,P5-Bis(Adenosine-5'-)pentaphosphate (Ap5a)
Length = 222
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 25/126 (19%)
Query: 182 MENIAATDTIKVTLEWAMTNLMKNREAMKKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVV 241
+ +I+A D ++ + N + +E M+K Q +V D+ V+ +V
Sbjct: 31 LAHISAGDLLRAEIAAGSENGKRAKEFMEKGQ-----LVPDEIVVN------------MV 73
Query: 242 KETMRFQPAGQFLLRETTEKCVIDGYHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERF 300
KE +R QP Q ++DGY + + L I D + D PDE + ER
Sbjct: 74 KERLR-QPDAQ------ENGWLLDGYPRSYSQAMALETLEIRPDTFILLDVPDELLVERV 126
Query: 301 VGSNID 306
VG +D
Sbjct: 127 VGRRLD 132
>pdb|3A2J|A Chain A, Crystal Structure Of The Human Vitamin D Receptor
(H305fH397F) LIGAND Binding Domain Complexed With
Tei-9647
Length = 263
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Query: 143 HLDPKRPKVA-EQEDLIDVLL-AEMKTAD-DHQTFDSIKSTIMENIAATDTIKVTLEWAM 199
H+D RPK++ EQ+ +I +LL A KT D + F + + N VTLE +
Sbjct: 3 HMDSLRPKLSEEQQRIIAILLDAHHKTYDPTYSDFCQFRPPVRVNDGGG---SVTLELSQ 59
Query: 200 TNLMKNREAM--KKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKETMRFQPAGQFLLRE 257
+++ + + +QK + + GF D ++ LK+ E + + F + +
Sbjct: 60 LSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSEDQIVLLKSSAIEVIMLRSNESFTMDD 119
Query: 258 TTEKC 262
+ C
Sbjct: 120 MSWTC 124
>pdb|3P8X|A Chain A, Synthesis, Structure, And Biological Activity Of Des-Side
Chain Analogues Of 1alpha,25-Dihydroxyvitamin D3 With
Substituents At C-18
Length = 280
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Query: 143 HLDPKRPKVA-EQEDLIDVLL-AEMKTAD-DHQTFDSIKSTIMENIAATDTIKVTLEWAM 199
H+D RPK++ EQ+ +I +LL A KT D + F + + N VTLE +
Sbjct: 20 HMDSLRPKLSEEQQRIIAILLDAHHKTYDPTYSDFCQFRPPVRVNDGGG---SVTLELSQ 76
Query: 200 TNLMKNREAM--KKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKETMRFQPAGQFLLRE 257
+++ + + +QK + + GF D ++ LK+ E + + F + +
Sbjct: 77 LSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSEDQIVLLKSSAIEVIMLRSNESFTMDD 136
Query: 258 TTEKC 262
+ C
Sbjct: 137 MSWTC 141
>pdb|2XR1|A Chain A, Dimeric Archaeal Cleavage And Polyadenylation Specificity
Factor With N-Terminal Kh Domains (Kh-Cpsf) From
Methanosarcina Mazei
pdb|2XR1|B Chain B, Dimeric Archaeal Cleavage And Polyadenylation Specificity
Factor With N-Terminal Kh Domains (Kh-Cpsf) From
Methanosarcina Mazei
Length = 640
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 331 MPIVELALANLLYKFDWKMPHGMKIDDLDFEATPGLTQHKKKPLKL 376
MPI E L +L +K + +P G+ I D++FE P L + ++P K
Sbjct: 4 MPI-EDVLLDLKHKIEKNLPAGVTITDVEFEG-PQLVLYTEEPRKF 47
>pdb|3A2I|A Chain A, Crystal Structure Of The Human Vitamin D Receptor (H305f)
Ligand Binding Domain Complexed With Tei-9647
Length = 263
Score = 28.5 bits (62), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Query: 143 HLDPKRPKVA-EQEDLIDVLL-AEMKTAD-DHQTFDSIKSTIMENIAATDTIKVTLEWAM 199
H+D RPK++ EQ+ +I +LL A KT D + F + + N VTLE +
Sbjct: 3 HMDSLRPKLSEEQQRIIAILLDAHHKTYDPTYSDFCQFRPPVRVNDGGG---SVTLELSQ 59
Query: 200 TNLMKNREAM--KKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKETMRFQPAGQFLLRE 257
+++ + + +QK + + GF D ++ LK+ E + + F + +
Sbjct: 60 LSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSEDQIVLLKSSAIEVIMLRSNESFTMDD 119
Query: 258 TTEKC 262
+ C
Sbjct: 120 MSWTC 124
>pdb|1S0Z|A Chain A, Crystal Structure Of The Vdr Lbd Complexed To Seocalcitol.
pdb|1S19|A Chain A, Crystal Structure Of Vdr Ligand Binding Domain Complexed
To Calcipotriol.
pdb|1TXI|A Chain A, Crystal Structure Of The Vdr Ligand Binding Domain
Complexed To Tx522
pdb|2HAM|A Chain A, Crystal Structure Of Vdr Lbd Complexed To 2alpha-Propyl-
Calcitriol
pdb|2HAR|A Chain A, Crystal Structure Of Vdr Lbd In Complex With 2 Alpha-(3-
Hydroxy-1-Propoxy) Calcitriol
pdb|2HAS|A Chain A, Crystal Structure Of Vdr Lbd In Complex With 2alpha-(1-
Propoxy) Calcitriol
pdb|2HB7|A Chain A, Crystal Structure Of Vdr Lbd In Complex With 2alpha(3-
Hydroxy-1-Propyl) Calcitriol
pdb|2HB8|A Chain A, Crystal Structure Of Vdr Lbd In Complex With 2alpha-Methyl
Calcitriol
pdb|3CS4|A Chain A, Structure-Based Design Of A Superagonist Ligand For The
Vitamin D Nuclear Receptor
pdb|3CS6|A Chain A, Structure-Based Design Of A Superagonist Ligand For The
Vitamin D Nuclear Receptor
pdb|3A3Z|X Chain X, Crystal Structure Of The Human Vdr Ligand Binding Domain
Bound To The Synthetic Agonist Compound 2alpha-Methyl-
Amcr277a(C23s)
pdb|3A40|X Chain X, Crystal Structure Of The Human Vdr Ligand Binding Domain
Bound To The Synthetic Agonist Compound 2alpha-Methyl-
Amcr277b(C23r)
pdb|3A78|A Chain A, Crystal Structure Of The Human Vdr Ligand Binding Domain
Bound To The Natural Metabolite
1alpha,25-Dihydroxy-3-Epi-Vitamin D3
pdb|3AUQ|A Chain A, Crystal Structure Of The Human Vitamin D Receptor Ligand
Binding Domain Complexed With Yne-Diene Type Analog Of
Active 14-Epi-2alpha- Methyl-19-Norvitamin D3
pdb|3AUR|A Chain A, Crystal Structure Of The Human Vitamin D Receptor Ligand
Binding Domain Complexed With Yne-Diene Type Analog Of
Active 14-Epi-2beta- Methyl-19-Norvitamin D3
pdb|3AX8|A Chain A, Crystal Structure Of The Human Vitamin D Receptor Ligand
Binding Domain Complexed With
15alpha-Methoxy-1alpha,25-Dihydroxyvitamin D3
Length = 263
Score = 28.1 bits (61), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Query: 143 HLDPKRPKVA-EQEDLIDVLL-AEMKTAD-DHQTFDSIKSTIMENIAATDTIKVTLEWAM 199
H+D RPK++ EQ+ +I +LL A KT D + F + + N VTLE +
Sbjct: 3 HMDSLRPKLSEEQQRIIAILLDAHHKTYDPTYSDFCQFRPPVRVNDGGG---SVTLELSQ 59
Query: 200 TNLMKNREAM--KKVQKEVRYVVKDKGFVDEDDLQRLEYLKAVVKETMRFQPAGQFLLRE 257
+++ + + +QK + + GF D ++ LK+ E + + F + +
Sbjct: 60 LSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSEDQIVLLKSSAIEVIMLRSNESFTMDD 119
Query: 258 TTEKC 262
+ C
Sbjct: 120 MSWTC 124
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,596,467
Number of Sequences: 62578
Number of extensions: 436009
Number of successful extensions: 1361
Number of sequences better than 100.0: 188
Number of HSP's better than 100.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 1145
Number of HSP's gapped (non-prelim): 190
length of query: 382
length of database: 14,973,337
effective HSP length: 101
effective length of query: 281
effective length of database: 8,652,959
effective search space: 2431481479
effective search space used: 2431481479
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)