Query         046539
Match_columns 484
No_of_seqs    192 out of 2522
Neff          10.8
Searched_HMMs 46136
Date          Fri Mar 29 13:07:57 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046539.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046539hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PLN02290 cytokinin trans-hydro 100.0 2.5E-77 5.3E-82  595.5  48.7  469    9-484    12-514 (516)
  2 KOG0156 Cytochrome P450 CYP2 s 100.0 4.8E-78   1E-82  577.9  40.0  417   39-484    26-487 (489)
  3 KOG0158 Cytochrome P450 CYP3/C 100.0 4.3E-77 9.4E-82  562.1  42.3  425   38-484    30-498 (499)
  4 KOG0157 Cytochrome P450 CYP4/C 100.0 8.3E-75 1.8E-79  567.5  37.7  418   37-484    33-495 (497)
  5 PTZ00404 cytochrome P450; Prov 100.0 4.6E-73 9.9E-78  560.5  40.3  416   35-484    25-482 (482)
  6 PLN03234 cytochrome P450 83B1; 100.0   2E-72 4.4E-77  558.3  41.0  439   16-484    13-498 (499)
  7 PLN02183 ferulate 5-hydroxylas 100.0 1.7E-72 3.7E-77  559.2  40.3  421   39-484    36-511 (516)
  8 PLN02738 carotene beta-ring hy 100.0 3.1E-72 6.7E-77  560.6  41.2  430   28-484   104-594 (633)
  9 PLN02971 tryptophan N-hydroxyl 100.0 4.9E-72 1.1E-76  557.8  41.8  422   39-484    57-533 (543)
 10 PLN02500 cytochrome P450 90B1  100.0   2E-72 4.3E-77  556.2  38.0  410   39-483    38-488 (490)
 11 PLN02394 trans-cinnamate 4-mon 100.0 2.2E-71 4.8E-76  551.5  42.9  431   20-484    19-501 (503)
 12 PLN00110 flavonoid 3',5'-hydro 100.0 1.7E-71 3.7E-76  548.9  40.1  421   39-484    31-496 (504)
 13 PLN02687 flavonoid 3'-monooxyg 100.0 9.5E-72 2.1E-76  554.0  38.5  422   40-484    35-508 (517)
 14 PLN03112 cytochrome P450 famil 100.0 5.2E-71 1.1E-75  549.8  40.7  445    7-484     8-507 (514)
 15 PLN00168 Cytochrome P450; Prov 100.0   5E-71 1.1E-75  549.1  40.2  428   36-484    32-516 (519)
 16 PLN02966 cytochrome P450 83A1  100.0 6.9E-71 1.5E-75  546.4  39.8  399   40-461    30-471 (502)
 17 PLN03195 fatty acid omega-hydr 100.0 6.8E-71 1.5E-75  548.8  39.9  418   40-484    31-515 (516)
 18 PLN02774 brassinosteroid-6-oxi 100.0 6.4E-71 1.4E-75  541.1  39.1  405   40-483    32-462 (463)
 19 PLN02169 fatty acid (omega-1)- 100.0 1.7E-70 3.7E-75  540.7  40.6  424   37-484    29-499 (500)
 20 PLN02196 abscisic acid 8'-hydr 100.0 1.7E-69 3.7E-74  530.5  37.9  401   39-483    35-461 (463)
 21 PLN02655 ent-kaurene oxidase   100.0 2.2E-69 4.9E-74  530.6  37.9  415   41-484     1-463 (466)
 22 KOG0159 Cytochrome P450 CYP11/ 100.0 6.8E-69 1.5E-73  494.3  35.5  418   40-484    51-517 (519)
 23 PLN03141 3-epi-6-deoxocathaste 100.0 1.2E-68 2.5E-73  524.0  36.9  408   39-484     7-449 (452)
 24 PLN02302 ent-kaurenoic acid ox 100.0 8.6E-68 1.9E-72  525.5  42.9  413   39-484    42-487 (490)
 25 PLN03018 homomethionine N-hydr 100.0 4.3E-67 9.4E-72  518.3  42.7  420   40-484    41-523 (534)
 26 PF00067 p450:  Cytochrome P450 100.0 8.8E-69 1.9E-73  531.2  28.2  416   41-481     1-463 (463)
 27 PLN02987 Cytochrome P450, fami 100.0 8.9E-67 1.9E-71  509.4  38.1  410   40-484    31-468 (472)
 28 PLN02936 epsilon-ring hydroxyl 100.0 1.1E-66 2.4E-71  513.7  38.8  419   41-484    14-481 (489)
 29 PLN02426 cytochrome P450, fami 100.0 2.6E-65 5.6E-70  503.0  42.0  392   79-484    63-499 (502)
 30 KOG0684 Cytochrome P450 [Secon 100.0 1.3E-63 2.8E-68  447.9  30.0  415   40-484    32-484 (486)
 31 PLN02648 allene oxide synthase 100.0 2.2E-60 4.8E-65  460.7  31.1  392   40-461    18-463 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 3.6E-53 7.7E-58  405.9  31.0  362   81-483    27-409 (411)
 33 PF12554 MOZART1:  Mitotic-spin  62.0      31 0.00067   21.6   4.7   42  282-323     6-47  (48)
 34 PF08492 SRP72:  SRP72 RNA-bind  60.4     6.5 0.00014   25.8   1.6    8  403-410    44-51  (59)
 35 PF12508 DUF3714:  Protein of u  45.6      18 0.00038   30.9   2.4   44  339-383    51-94  (200)
 36 PHA02902 putative IMV membrane  45.4      61  0.0013   21.5   4.2    7   40-46     29-35  (70)
 37 PF05952 ComX:  Bacillus compet  39.7      29 0.00062   22.7   2.1   19  304-322     4-22  (57)
 38 PF13131 DUF3951:  Protein of u  37.4      61  0.0013   20.4   3.1   27    1-27      1-28  (53)
 39 PF07219 HemY_N:  HemY protein   36.6      72  0.0016   24.1   4.4   24    9-32     24-47  (108)
 40 COG2101 SPT15 TATA-box binding  36.1      13 0.00029   30.4   0.3   36  400-436    35-70  (185)
 41 PF11138 DUF2911:  Protein of u  36.0      40 0.00086   27.1   2.9   42  363-406    51-99  (145)
 42 KOG3506 40S ribosomal protein   34.7      18 0.00039   23.0   0.6   11  423-433    12-22  (56)
 43 PRK06789 flagellar motor switc  33.3      60  0.0013   22.6   3.0   38  347-384    22-62  (74)
 44 PF09201 SRX:  SRX;  InterPro:   32.3      35 0.00076   26.8   2.0   23  430-452    18-40  (148)
 45 PF15300 INT_SG_DDX_CT_C:  INTS  31.3      36 0.00078   22.9   1.7   15  340-354    40-54  (65)
 46 TIGR00589 ogt O-6-methylguanin  31.0   1E+02  0.0023   21.8   4.1   60  314-373     2-66  (80)
 47 PF15330 SIT:  SHP2-interacting  30.4      55  0.0012   24.8   2.7   10   47-56     46-55  (107)
 48 PF12444 Sox_N:  Sox developmen  29.8      35 0.00077   24.4   1.5   21  440-460    60-80  (84)
 49 PF11227 DUF3025:  Protein of u  25.9      38 0.00082   29.1   1.3   20  386-406   192-211 (212)
 50 PF13625 Helicase_C_3:  Helicas  22.9 1.4E+02   0.003   23.4   4.0   41   77-119    75-115 (129)
 51 PF08285 DPM3:  Dolichol-phosph  22.8 1.3E+02  0.0029   21.9   3.4   30  298-327    52-81  (91)
 52 PF08599 Nbs1_C:  DNA damage re  22.3      51  0.0011   21.8   1.1   25   32-56      3-28  (65)
 53 PF07886 BA14K:  BA14K-like pro  20.8      86  0.0019   17.6   1.6   14  420-433    18-31  (31)
 54 PRK00901 methylated-DNA--prote  20.6 1.6E+02  0.0034   24.1   3.9   62  313-374    72-138 (155)
 55 PF13893 RRM_5:  RNA recognitio  20.4 2.3E+02   0.005   17.8   4.0   34   83-116     2-39  (56)

No 1  
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=2.5e-77  Score=595.49  Aligned_cols=469  Identities=33%  Similarity=0.632  Sum_probs=371.7

Q ss_pred             HHHHHHHHHHHHHHHHHhcchHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhh-ccCCCCCCCCccccccchHHHHHH
Q 046539            9 FATIILAYCAWKILNWAWLKPKKLENFLRQQGFSGNSYKIFHGDTKDMSMMLKEA-KARPISLSDDIVPRILPYHHHIIS   87 (484)
Q Consensus         9 l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~Pgp~~~p~~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   87 (484)
                      +++..+.-+++..+..++.+|.+...+.++++||||+++|++||++++....... .......++++.++....+.+|++
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (516)
T PLN02290         12 IFLTLLLRVAYDTISCYFLTPRRIKKIMERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSK   91 (516)
T ss_pred             HHHHHHHHHHHHHHHHHhccHHHHHHHHHHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHH
Confidence            3333333456666777899999999999999999999999999999886432111 111111234444556667899999


Q ss_pred             HhCCceEEeeCCcCeEEeCCHHHHHHHHhhCCcccCCCCC-c--cccccccceeecCCcchhHHHhhhccCCChHHHhhh
Q 046539           88 KYGKKSFKWMGPRPSINVQDPKLIREILLKHDIFQKPKGN-S--LGKLVVNGMVTYEGEQWSKVRKIANPAFHQDKLKDM  164 (484)
Q Consensus        88 ~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~-~--~~~~~g~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~  164 (484)
                      +||++|++++|+.++|+++||+++++++.++..+..++.. .  ....+|.++++++|+.|+++|+++.+.|+.++++.+
T Consensus        92 ~yG~i~~~~~g~~~~vvv~dp~~v~~il~~~~~~~~r~~~~~~~~~~~~g~~l~~~~g~~Wk~~Rk~~~~~f~~~~l~~~  171 (516)
T PLN02290         92 QYGKRFIYWNGTEPRLCLTETELIKELLTKYNTVTGKSWLQQQGTKHFIGRGLLMANGADWYHQRHIAAPAFMGDRLKGY  171 (516)
T ss_pred             HhCCeEEEccCCccEEEECCHHHHHHHHhcCCCCCCCcchhhhHHHHHhcCCccccCchHHHHHHhhcccccCHHHHHHH
Confidence            9999999999999999999999999999876544333322 1  233567888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHHHHHHHhCCCccchhHHHHHHHHHHHHHHhhhc------c
Q 046539          165 LPKMYLSCNHMIRKLFEIAASDEESFELDIWPHIQALAADVISRTAFGSNYDDGRKIFELIREQSHLFIEVSQ------F  238 (484)
Q Consensus       165 ~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~------~  238 (484)
                      .+.+.++++.+++.|.+..+.  ++..+|+.+++..+++|+++.++||.+++..++.......+.........      .
T Consensus       172 ~~~i~~~~~~l~~~l~~~~~~--~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  249 (516)
T PLN02290        172 AGHMVECTKQMLQSLQKAVES--GQTEVEIGEYMTRLTADIISRTEFDSSYEKGKQIFHLLTVLQRLCAQATRHLCFPGS  249 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc--CCceEEhHHHHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHhhhhhcCchh
Confidence            999999999999999865432  23479999999999999999999999876554444444333322211110      1


Q ss_pred             cccchh-H------------------HHHHHh---c--cCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcc
Q 046539          239 DYIPGW-R------------------EEALRI---G--KASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAG  294 (484)
Q Consensus       239 ~~~p~~-~------------------~~~~~~---~--~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG  294 (484)
                      .++|.. .                  ++..+.   +  ....+|+++.++++..+.. +.+..++++++.+++.++++||
T Consensus       250 ~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~~~l~~~~i~~~~~~~~~AG  328 (516)
T PLN02290        250 RFFPSKYNREIKSLKGEVERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKR-SNGFNLNLQLIMDECKTFFFAG  328 (516)
T ss_pred             hhCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccC-CCCCCCCHHHHHHHHHHHHhhh
Confidence            122211 0                  011111   1  0124688998887543210 1123478999999999999999


Q ss_pred             cccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEE
Q 046539          295 QETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFI  374 (484)
Q Consensus       295 ~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~  374 (484)
                      +|||+++++|++++|++||++|+|+++|+++++++..++++++++|||++|||+||||++|+++.++|.+.+|++++||.
T Consensus       329 ~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~  408 (516)
T PLN02290        329 HETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGETPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLH  408 (516)
T ss_pred             HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEE
Confidence            99999999999999999999999999999999997788999999999999999999999999999999999999999999


Q ss_pred             eCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcE
Q 046539          375 LPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFS  454 (484)
Q Consensus       375 Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  454 (484)
                      |||||.|.++.+++||||++||+||++|+||||++.+.   . +...++|||.|+|.|+|++||++|++++++.|+++|+
T Consensus       409 IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~---~-~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~  484 (516)
T PLN02290        409 IPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF---A-PGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFS  484 (516)
T ss_pred             ECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCCC---C-CCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhce
Confidence            99999999999999999999966999999999995421   1 2257999999999999999999999999999999999


Q ss_pred             EEeCCCcccCCCCcceeccCCCcceeeecC
Q 046539          455 FQLSPTYVHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       455 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      ++++++....+..+.++.|+++++|++++|
T Consensus       485 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  514 (516)
T PLN02290        485 FTISDNYRHAPVVVLTIKPKYGVQVCLKPL  514 (516)
T ss_pred             EeeCCCcccCccceeeecCCCCCeEEEEeC
Confidence            999877544455578899999999999987


No 2  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4.8e-78  Score=577.92  Aligned_cols=417  Identities=24%  Similarity=0.396  Sum_probs=340.5

Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhC
Q 046539           39 QGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKH  118 (484)
Q Consensus        39 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~  118 (484)
                      +.||||+++|++||++++...                 .++..++++.++|||+|.+|+|..|+|||+|+++++|++.++
T Consensus        26 ~lPPGP~~lPiIGnl~~l~~~-----------------~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~   88 (489)
T KOG0156|consen   26 NLPPGPPPLPIIGNLHQLGSL-----------------PPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQ   88 (489)
T ss_pred             CCCcCCCCCCccccHHHcCCC-----------------chhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhC
Confidence            379999999999999998641                 368899999999999999999999999999999999999998


Q ss_pred             C-cccCCCCC-cc-cccc--ccceeec-CCcchhHHHhhhccC-CChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcc
Q 046539          119 D-IFQKPKGN-SL-GKLV--VNGMVTY-EGEQWSKVRKIANPA-FHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFE  191 (484)
Q Consensus       119 ~-~~~~~~~~-~~-~~~~--g~~~~~~-~~~~~~~~R~~~~~~-f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~  191 (484)
                      + .|+.++.. .. ..+.  +.+++++ +|+.|+.+||++... ++...+++....-.++++.+++.+.+ .+   .+.+
T Consensus        89 d~~fa~Rp~~~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~---~~~~  164 (489)
T KOG0156|consen   89 DLEFADRPDPTATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SK---KGEP  164 (489)
T ss_pred             CccccCCCCchhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cC---CCce
Confidence            8 78877752 23 3333  3467776 899999999999965 67777888877779999999999887 11   2278


Q ss_pred             cchHHHHHHHHHHHHHHHHhCCCccch-----hHHHHHHHHHHHHHHhhhcccccc-hhH--------------------
Q 046539          192 LDIWPHIQALAADVISRTAFGSNYDDG-----RKIFELIREQSHLFIEVSQFDYIP-GWR--------------------  245 (484)
Q Consensus       192 vdl~~~~~~~~~~~i~~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~p-~~~--------------------  245 (484)
                      +|+...+..++.++|++++||.++...     .++...+.+.....+.....+++| .+.                    
T Consensus       165 vdl~~~l~~~~~nvI~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~  244 (489)
T KOG0156|consen  165 VDLSELLDLLVGNVICRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLD  244 (489)
T ss_pred             eeHHHHHHHHHHHHHHHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHH
Confidence            999999999999999999999998753     124445555555554443344444 211                    


Q ss_pred             ---H----HHHHh-ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHH
Q 046539          246 ---E----EALRI-GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQE  317 (484)
Q Consensus       246 ---~----~~~~~-~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~  317 (484)
                         +    +..+. +....+|++|.+++...++.   ...++++++.+.+.++++||+|||++++.|++.+|++||++|+
T Consensus       245 ~~~~~~i~eh~~~~~~~~~~D~vD~lL~~~~~~~---~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~  321 (489)
T KOG0156|consen  245 EFLERIIDEHREKIGDEEGRDFVDALLKLMKEEK---AEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQK  321 (489)
T ss_pred             HHHHHHHHHHHhhhccCCCCcHHHHHHHhhcccc---cCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHH
Confidence               0    11111 11223799999998765431   1228999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCC-CCCChhhhccChhHHHHHHHhhcCCCCccc-ccccccccceecCEEeCCCCeEEechhhhhcCCCCc
Q 046539          318 RARQEVFQVLGN-KEPKFDELNRLKMVGKIIYEVFRIYSPAYL-IFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYW  395 (484)
Q Consensus       318 ~l~~Ei~~~~~~-~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~  395 (484)
                      |+++||++++|. +.++.+|+.++|||+|||+|++|++|++|. ++|.+++|+.|+||.|||||.|+++.|++||||++|
T Consensus       322 K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw  401 (489)
T KOG0156|consen  322 KLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVW  401 (489)
T ss_pred             HHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccC
Confidence            999999999994 449999999999999999999999999997 799999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCcc-hhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCc-ccCCCCcceecc
Q 046539          396 GDDAKAFNPDRFSEGV-SKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTY-VHAPSSGITVYP  473 (484)
Q Consensus       396 g~~p~~F~P~R~l~~~-~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~  473 (484)
                       +||++|+||||++.+ ...   ....++|||.|+|+|||..+|++++.+++++|+++|+|+++++. +.... +.++..
T Consensus       402 -~dP~eF~PERFl~~~d~~~---~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~~~d~~e~-~~~~~~  476 (489)
T KOG0156|consen  402 -EDPEEFKPERFLDSNDGKG---LDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGGKVDMEEA-GLTLKK  476 (489)
T ss_pred             -CCccccChhhhcCCccccC---CceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCCCCCCccc-ccceec
Confidence             899999999999974 322   33789999999999999999999999999999999999998761 11122 355556


Q ss_pred             CCCcceeeecC
Q 046539          474 QHGAHMILNKL  484 (484)
Q Consensus       474 ~~~~~v~~~~~  484 (484)
                      +.++.+...+|
T Consensus       477 ~~pl~~~~~~r  487 (489)
T KOG0156|consen  477 KKPLKAVPVPR  487 (489)
T ss_pred             CCcceeeeecC
Confidence            66666665554


No 3  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4.3e-77  Score=562.10  Aligned_cols=425  Identities=31%  Similarity=0.500  Sum_probs=339.4

Q ss_pred             hcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhh
Q 046539           38 QQGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLK  117 (484)
Q Consensus        38 ~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~  117 (484)
                      ++++|||++.|++||+..+.+...                +..+..+...+||+++.++.+.+|.++|+||++|++|+.+
T Consensus        30 rrGi~~~~p~p~~Gn~~~~~~~~~----------------~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik   93 (499)
T KOG0158|consen   30 RRGIPGPKPLPFLGNLPGMLKRER----------------PGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIK   93 (499)
T ss_pred             cCCCCCCCCCCcEecHHHHHhccC----------------cHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHH
Confidence            349999999999999999876321                1123333334449999999999999999999999999998


Q ss_pred             CC-cccC--CCCCc-cc-cccccceeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 046539          118 HD-IFQK--PKGNS-LG-KLVVNGMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFEL  192 (484)
Q Consensus       118 ~~-~~~~--~~~~~-~~-~~~g~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~v  192 (484)
                      .. .|..  ++... -. .+...+++...|++|+++|..++|.|+..+++++.+.+++.++++++.+++....   +..+
T Consensus        94 ~F~~F~~r~~~~~~d~~~~l~~~~Lf~~~g~~WK~lR~~lsP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~---~~~~  170 (499)
T KOG0158|consen   94 DFDNFYNRKRPIYGDPEDPLSALNLFFLRGERWKRLRTKLSPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEG---GQEG  170 (499)
T ss_pred             hCccCcCCCCCCcCCCCCcccccCchhccCchHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHHHHHhhcc---cCCc
Confidence            75 6766  33222 22 3444678899999999999999999999999999999999999999999986432   1468


Q ss_pred             chHHHHHHHHHHHHHHHHhCCCccchh----HHHHHHHHHHHHHHhh-----hcccccchhH------------------
Q 046539          193 DIWPHIQALAADVISRTAFGSNYDDGR----KIFELIREQSHLFIEV-----SQFDYIPGWR------------------  245 (484)
Q Consensus       193 dl~~~~~~~~~~~i~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~-----~~~~~~p~~~------------------  245 (484)
                      ++.+.+..++.|+|++++||.+.+...    ++..........+...     ......|.+.                  
T Consensus       171 ~~~dl~~~yT~DVI~~~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~  250 (499)
T KOG0158|consen  171 EIKDLCARYTTDVIGSCAFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLRVKLFPEDVTDFFRK  250 (499)
T ss_pred             cHHHHHHHHHHHHHhHhhcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhhcccChHHHHHHHHH
Confidence            888889999999999999999765432    2222111111110000     0001111111                  


Q ss_pred             --HHHH---HhccCCchhHHHHHHHhhhHhh-HHhhc-CCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHH
Q 046539          246 --EEAL---RIGKASNDDLLGLLMESNYKEI-QEKEA-GMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQER  318 (484)
Q Consensus       246 --~~~~---~~~~~~~~~~l~~ll~~~~~~~-~~~~~-~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~  318 (484)
                        ...+   +.....+.|+++.+++...++. ..+.. .++.+|+++++..|++||+||||+++++++|+||+|||+|+|
T Consensus       251 ~v~~~v~~R~~~~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~k  330 (499)
T KOG0158|consen  251 LVNSRVEQREKENIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDK  330 (499)
T ss_pred             HHHHHHHHHHhcCCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHH
Confidence              1112   2222357899999998775311 11222 599999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCC-CChhhhccChhHHHHHHHhhcCCCCcccccccccccceec-CEEeCCCCeEEechhhhhcCCCCcc
Q 046539          319 ARQEVFQVLGNKE-PKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLG-DFILPPGVLLSLPIILVHHDHEYWG  396 (484)
Q Consensus       319 l~~Ei~~~~~~~~-~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~-g~~Ip~G~~v~~~~~~~~~d~~~~g  396 (484)
                      ||+||++++.+.. ++++.+.+|+||++||+||||+||+++.+.|.+++|++++ ++.||||+.|.++++++||||++| 
T Consensus       331 LreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~-  409 (499)
T KOG0158|consen  331 LREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYW-  409 (499)
T ss_pred             HHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccccCCcccC-
Confidence            9999999977444 9999999999999999999999999999999999999999 999999999999999999999999 


Q ss_pred             CCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCCCC---cceecc
Q 046539          397 DDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAPSS---GITVYP  473 (484)
Q Consensus       397 ~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~---~~~~~~  473 (484)
                      |||++|+||||.++..+ ..++ .+|+|||.|+|+|+|++||.+|+|+++++||++|+++.++.....-..   ++++.|
T Consensus       410 p~Pe~F~PERF~~~~~~-~~~~-~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~~~~~~~~~~l~p  487 (499)
T KOG0158|consen  410 PEPEKFKPERFEEENNK-SRHP-GAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIPLEGDPKGFTLSP  487 (499)
T ss_pred             CCcccCCCccCCCCccc-ccCC-ccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCcccCCccceeeec
Confidence            99999999999987544 2334 899999999999999999999999999999999999988742222223   677899


Q ss_pred             CCCcceeeecC
Q 046539          474 QHGAHMILNKL  484 (484)
Q Consensus       474 ~~~~~v~~~~~  484 (484)
                      ++++++++++|
T Consensus       488 k~gi~Lkl~~r  498 (499)
T KOG0158|consen  488 KGGIWLKLEPR  498 (499)
T ss_pred             CCceEEEEEeC
Confidence            99999999987


No 4  
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=8.3e-75  Score=567.52  Aligned_cols=418  Identities=30%  Similarity=0.546  Sum_probs=339.3

Q ss_pred             HhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHh
Q 046539           37 RQQGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILL  116 (484)
Q Consensus        37 ~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~  116 (484)
                      +.+.+|||+++|++|+..++.+..               .++..++.++..+||++|..|+|+.+.|+++||+.+++|+.
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~   97 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPL---------------EEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILK   97 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcch---------------hHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHh
Confidence            445789999999999999987521               24567899999999999999999999999999999999996


Q ss_pred             hCC-cccCCCCCc--cccccccceeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 046539          117 KHD-IFQKPKGNS--LGKLVVNGMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELD  193 (484)
Q Consensus       117 ~~~-~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vd  193 (484)
                      ++. ...+.+.+.  +..++|+|+++++|+.|+++|++++++|+.+.++.+...+.+++..+...+.....    +..+|
T Consensus        98 ~~~~~~~k~~~~~~~~~~~lG~gll~~~g~~W~~~Rk~~~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~----~~~vd  173 (497)
T KOG0157|consen   98 SSNENYPKGPDYPESLKPWLGDGLLFSDGEKWHKHRKLLTPAFHFEILKSFVPVFIESSLILLLLLELAAS----GEEVD  173 (497)
T ss_pred             cCcccCCCchhHHHHHHHHhcCccccCCchHHHHHHhhccHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc----CCeEc
Confidence            544 566665554  77899999999999999999999999999999999999999999888888776422    22299


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCc-c-ch---hHHHHHHHHHHHHHHhhhcccccc-hhH----------------------
Q 046539          194 IWPHIQALAADVISRTAFGSNY-D-DG---RKIFELIREQSHLFIEVSQFDYIP-GWR----------------------  245 (484)
Q Consensus       194 l~~~~~~~~~~~i~~~~fG~~~-~-~~---~~~~~~~~~~~~~~~~~~~~~~~p-~~~----------------------  245 (484)
                      +.+.++++++|+++..+||... . ..   .++...+..+...+..   ....| +..                      
T Consensus       174 ~~~~~~~~tld~i~~~~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~  250 (497)
T KOG0157|consen  174 LQDLLKRLTLDIICKTAMGPESLDAEGPELFEYVQAFDDLTELISK---RINLPLGTKFLYGLKSERKLKKARKILHDFL  250 (497)
T ss_pred             HHHHHHHHHHHHHHHHhcCCccccccCCcccHHHHHHHHHHHHHHH---HHcCchhhhHHhhcchHHHHHHHHHHHHHHH
Confidence            9999999999999999999322 1 22   2333333333222221   12222 110                      


Q ss_pred             ----HHHHH---hcc----CCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChH
Q 046539          246 ----EEALR---IGK----ASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPI  314 (484)
Q Consensus       246 ----~~~~~---~~~----~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~  314 (484)
                          .++.+   ...    ....|+++.+..+.       +..++++++++++.+|++||+|||+++++|+++.|+.||+
T Consensus       251 ~~iI~~rr~~~~~~~~~~~~~~~d~L~~~~~~~-------~~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~  323 (497)
T KOG0157|consen  251 EKIIRERREELEKEGSGEEKKRLDFLDTLLLEE-------DKPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPE  323 (497)
T ss_pred             HHHHHHHHHHHHhcCCcccchhhhHHHHHHHhc-------cCCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHH
Confidence                01111   011    22456666422221       1468999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCCChhh--hccChhHHHHHHHhhcCCCCcccccccccccceec-CEEeCCCCeEEechhhhhcC
Q 046539          315 WQERARQEVFQVLGNKEPKFDE--LNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLG-DFILPPGVLLSLPIILVHHD  391 (484)
Q Consensus       315 ~~~~l~~Ei~~~~~~~~~~~~~--~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~-g~~Ip~G~~v~~~~~~~~~d  391 (484)
                      +|+++++|++++++++...+++  .++|+|+++||+||||||||+|.+.|.+.+|++++ ||.||||+.|.++++++|||
T Consensus       324 vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~  403 (497)
T KOG0157|consen  324 VQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRD  403 (497)
T ss_pred             HHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccC
Confidence            9999999999999844443333  33599999999999999999999999999999995 89999999999999999999


Q ss_pred             CCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCCCCccee
Q 046539          392 HEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAPSSGITV  471 (484)
Q Consensus       392 ~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~  471 (484)
                      +++|++||++||||||+++......++ .+|+|||+|+|.|+|+.||++|++++++.++++|+|++..+....+....++
T Consensus       404 ~~~~~~dp~~F~PeRf~~~~~~~~~~~-~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~~~~~~~~~l  482 (497)
T KOG0157|consen  404 PRVWGEDPEEFDPERFLDGEEKAKRHP-FAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDKPKPVPELTL  482 (497)
T ss_pred             ccccCCChhhcCccccCCCCCcCCCCC-ccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCCceeeeEEEE
Confidence            999977999999999997644333334 8999999999999999999999999999999999999887754667888999


Q ss_pred             ccCCCcceeeecC
Q 046539          472 YPQHGAHMILNKL  484 (484)
Q Consensus       472 ~~~~~~~v~~~~~  484 (484)
                      +|++|++|+++||
T Consensus       483 ~~~~gl~v~~~~r  495 (497)
T KOG0157|consen  483 RPKNGLKVKLRPR  495 (497)
T ss_pred             EecCCeEEEEEeC
Confidence            9999999999997


No 5  
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=4.6e-73  Score=560.50  Aligned_cols=416  Identities=21%  Similarity=0.334  Sum_probs=333.0

Q ss_pred             HHHhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHH
Q 046539           35 FLRQQGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREI  114 (484)
Q Consensus        35 ~~~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~v  114 (484)
                      +.+.+.+|||+++|++||+..+..                  +++.++.+++++||++|++++|+.++|+++||++++++
T Consensus        25 ~~~~~~~pgp~~~p~~G~~~~~~~------------------~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~i   86 (482)
T PTZ00404         25 KIHKNELKGPIPIPILGNLHQLGN------------------LPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREM   86 (482)
T ss_pred             hccCCCCCCCCCCCeeccHhhhcc------------------cHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHH
Confidence            355678999999999999987743                  45678999999999999999999999999999999999


Q ss_pred             HhhCC-cccCCCCCc-c-ccccccceeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcc
Q 046539          115 LLKHD-IFQKPKGNS-L-GKLVVNGMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFE  191 (484)
Q Consensus       115 l~~~~-~~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~  191 (484)
                      +.++. .|.+++... . ...++.|+++.+|+.|+++|+++.+.|+.++++++.+.+.+.++.+++.|.+..+   .+..
T Consensus        87 l~~~~~~~~~r~~~~~~~~~~~~~~l~~~~g~~w~~~Rk~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~---~~~~  163 (482)
T PTZ00404         87 FVDNFDNFSDRPKIPSIKHGTFYHGIVTSSGEYWKRNREIVGKAMRKTNLKHIYDLLDDQVDVLIESMKKIES---SGET  163 (482)
T ss_pred             HHhcchhhcCCCCcceeeeeccCCceeccChHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHh---cCCc
Confidence            98764 566554332 2 2334788899999999999999999999999999999999999999999976432   3456


Q ss_pred             cchHHHHHHHHHHHHHHHHhCCCccch--------hHHHHHHHHHHHHHHhhhcccc----cc-------hhH-------
Q 046539          192 LDIWPHIQALAADVISRTAFGSNYDDG--------RKIFELIREQSHLFIEVSQFDY----IP-------GWR-------  245 (484)
Q Consensus       192 vdl~~~~~~~~~~~i~~~~fG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~----~p-------~~~-------  245 (484)
                      +|+.+++..+++|+++.++||.+....        .++.....++...........+    .|       .+.       
T Consensus       164 vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (482)
T PTZ00404        164 FEPRYYLTKFTMSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLEHTDKNFKKIK  243 (482)
T ss_pred             cCHHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHHHHHHHHHHHHHH
Confidence            999999999999999999999876431        1222223322221111000000    01       000       


Q ss_pred             ---HHHHH----h-ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHH
Q 046539          246 ---EEALR----I-GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQE  317 (484)
Q Consensus       246 ---~~~~~----~-~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~  317 (484)
                         .+.++    . .....+|+++.+++...+.     ...+.+++++++..+++||+|||+++++|++++|++||++|+
T Consensus       244 ~~~~~~i~~~~~~~~~~~~~dll~~ll~~~~~~-----~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~  318 (482)
T PTZ00404        244 KFIKEKYHEHLKTIDPEVPRDLLDLLIKEYGTN-----TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQE  318 (482)
T ss_pred             HHHHHHHHHHHHccCCCCcccHHHHHHHHhccC-----CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHH
Confidence               11111    1 1113568999988764211     122344588999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCC-CCCChhhhccChhHHHHHHHhhcCCCCccc-cccccccccee-cCEEeCCCCeEEechhhhhcCCCC
Q 046539          318 RARQEVFQVLGN-KEPKFDELNRLKMVGKIIYEVFRIYSPAYL-IFRTNVEETKL-GDFILPPGVLLSLPIILVHHDHEY  394 (484)
Q Consensus       318 ~l~~Ei~~~~~~-~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i-~g~~Ip~G~~v~~~~~~~~~d~~~  394 (484)
                      |+++|+++++++ ..++++++++|||++|||+||||++|+++. ++|.+.+|+++ +||.|||||.|.++.+++||||++
T Consensus       319 kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~  398 (482)
T PTZ00404        319 KAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKY  398 (482)
T ss_pred             HHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccc
Confidence            999999999984 567999999999999999999999999997 79999999999 999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccC--CCCcceec
Q 046539          395 WGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHA--PSSGITVY  472 (484)
Q Consensus       395 ~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~--~~~~~~~~  472 (484)
                      | +||++|+||||++..     .+ ..|+|||+|+|.|+|++||++|++++++.|+++|+|+++++.+..  ...+.++.
T Consensus       399 ~-~dP~~F~PeRwl~~~-----~~-~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  471 (482)
T PTZ00404        399 F-ENPEQFDPSRFLNPD-----SN-DAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK  471 (482)
T ss_pred             c-CCccccCccccCCCC-----CC-CceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec
Confidence            9 999999999999742     22 689999999999999999999999999999999999987664332  23355566


Q ss_pred             cCCCcceeeecC
Q 046539          473 PQHGAHMILNKL  484 (484)
Q Consensus       473 ~~~~~~v~~~~~  484 (484)
                       .++++|++++|
T Consensus       472 -~~~~~v~~~~R  482 (482)
T PTZ00404        472 -PNKFKVLLEKR  482 (482)
T ss_pred             -CCCceeeeecC
Confidence             56899999987


No 6  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=2e-72  Score=558.33  Aligned_cols=439  Identities=20%  Similarity=0.314  Sum_probs=340.2

Q ss_pred             HHHHHHHHHHhcchHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEE
Q 046539           16 YCAWKILNWAWLKPKKLENFLRQQGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFK   95 (484)
Q Consensus        16 ~~~~~~~~~~~~~p~~~~~~~~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~   95 (484)
                      .+++.++++.+.++.+        .||||+++|++||+.++..                 .++..++.+++++||++|++
T Consensus        13 ~~~~~~~~~~~~~~~~--------~pPgp~~~P~iG~~~~~~~-----------------~~~~~~~~~~~~~yG~~~~~   67 (499)
T PLN03234         13 AAAFFFLRSTTKKSLR--------LPPGPKGLPIIGNLHQMEK-----------------FNPQHFLFRLSKLYGPIFTM   67 (499)
T ss_pred             HHHHHHHHHhcCCCCC--------CCcCCCCCCeeccHHhcCC-----------------CCccHHHHHHHHHcCCeEEE
Confidence            3445566666666654        7899999999999887632                 14566899999999999999


Q ss_pred             eeCCcCeEEeCCHHHHHHHHhhCC-cccCCCCCccc---cccccce-eecCCcchhHHHhhh-ccCCChHHHhhhHHHHH
Q 046539           96 WMGPRPSINVQDPKLIREILLKHD-IFQKPKGNSLG---KLVVNGM-VTYEGEQWSKVRKIA-NPAFHQDKLKDMLPKMY  169 (484)
Q Consensus        96 ~~~~~~~vvv~dp~~i~~vl~~~~-~~~~~~~~~~~---~~~g~~~-~~~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~  169 (484)
                      ++|+.++|+++||+++++++.++. .|.+++.....   ...+..+ ....++.|+++|+.+ .+.|++++++++.+.+.
T Consensus        68 ~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~  147 (499)
T PLN03234         68 KIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVRE  147 (499)
T ss_pred             EecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHH
Confidence            999999999999999999998776 77777654311   2223332 234578999999985 68999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHHHHHHHhCCCccchh----HHHHHHHHHHHHHHhhhcccccch--
Q 046539          170 LSCNHMIRKLFEIAASDEESFELDIWPHIQALAADVISRTAFGSNYDDGR----KIFELIREQSHLFIEVSQFDYIPG--  243 (484)
Q Consensus       170 ~~~~~l~~~l~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~p~--  243 (484)
                      +.++++++.|.+...   +++.+|+.+.+..+++|++++++||.+++..+    ++.+...+.............+|.  
T Consensus       148 ~~~~~ll~~l~~~~~---~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  224 (499)
T PLN03234        148 EECQRMMDKIYKAAD---QSGTVDLSELLLSFTNCVVCRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFG  224 (499)
T ss_pred             HHHHHHHHHHHHhcc---CCCeEEHHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHH
Confidence            999999999976533   34579999999999999999999999876432    222222222211111101111111  


Q ss_pred             -------h-H-----------------HHHHHh--ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccc
Q 046539          244 -------W-R-----------------EEALRI--GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQE  296 (484)
Q Consensus       244 -------~-~-----------------~~~~~~--~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~  296 (484)
                             + .                 ++..+.  .+...+|+++.+++...++  +.+..++++++.+++.++++||+|
T Consensus       225 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~l~~~~~~~--~~~~~~~~~~i~~~~~~ll~AG~d  302 (499)
T PLN03234        225 FLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRPKQETESFIDLLMQIYKDQ--PFSIKFTHENVKAMILDIVVPGTD  302 (499)
T ss_pred             HhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCcccHHHHHHHHhhcc--CcCCCCCHHHHHHHHHHHHhcchh
Confidence                   1 1                 011111  1123467888887643221  112358999999999999999999


Q ss_pred             cHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCC-CCCChhhhccChhHHHHHHHhhcCCCCccc-ccccccccceecCEE
Q 046539          297 TTASLLVWVLIMLCMHPIWQERARQEVFQVLGN-KEPKFDELNRLKMVGKIIYEVFRIYSPAYL-IFRTNVEETKLGDFI  374 (484)
Q Consensus       297 tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~-~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~  374 (484)
                      ||+++++|++++|++||++|+++++|+++++++ +.++++++++|||++|||+|+||++|+++. ++|.+.+|++++||.
T Consensus       303 TTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~  382 (499)
T PLN03234        303 TAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYD  382 (499)
T ss_pred             hHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEE
Confidence            999999999999999999999999999999984 567999999999999999999999999998 579999999999999


Q ss_pred             eCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhh-hcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhc
Q 046539          375 LPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKA-AKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNF  453 (484)
Q Consensus       375 Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~-~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f  453 (484)
                      |||||.|.++.+++||||++||+||++|+||||+++.+.. .......++|||+|+|.|+|+++|++|++++++.|+++|
T Consensus       383 IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f  462 (499)
T PLN03234        383 IPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKF  462 (499)
T ss_pred             ECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHhe
Confidence            9999999999999999999997799999999999753321 111236799999999999999999999999999999999


Q ss_pred             EEEeCCCccc---C--CCCcceeccCCCcceeeecC
Q 046539          454 SFQLSPTYVH---A--PSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       454 ~~~~~~~~~~---~--~~~~~~~~~~~~~~v~~~~~  484 (484)
                      +|+++++..+   .  ...+.+..|++.+++.+++|
T Consensus       463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        463 DWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             eeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence            9999876321   1  13356666888888888776


No 7  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=1.7e-72  Score=559.23  Aligned_cols=421  Identities=21%  Similarity=0.343  Sum_probs=325.1

Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhC
Q 046539           39 QGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKH  118 (484)
Q Consensus        39 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~  118 (484)
                      +.||||+++|++|+++++..                  .++.++.+|+++||++|++++|+.++|+++||+++++++.++
T Consensus        36 ~~ppgp~~~Pl~G~l~~~~~------------------~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~   97 (516)
T PLN02183         36 PYPPGPKGLPIIGNMLMMDQ------------------LTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQ   97 (516)
T ss_pred             CCCcCCCCCCeeccHHhcCC------------------cchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhh
Confidence            37899999999999877632                  234578999999999999999999999999999999999876


Q ss_pred             C-cccCCCCCc-ccccc---ccceeecCCcchhHHHhh-hccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 046539          119 D-IFQKPKGNS-LGKLV---VNGMVTYEGEQWSKVRKI-ANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFEL  192 (484)
Q Consensus       119 ~-~~~~~~~~~-~~~~~---g~~~~~~~~~~~~~~R~~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~v  192 (484)
                      . .|+.++... ...+.   +.+++..+|+.|+++|++ +.+.|+.+.++.+.+. .++++.+++.|.+.     .+.++
T Consensus        98 ~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~-----~~~~v  171 (516)
T PLN02183         98 DSVFSNRPANIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSN-----IGKPV  171 (516)
T ss_pred             hhhhcCCCcccchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhc-----CCCcE
Confidence            5 676655332 22222   345777889999999998 5789999999888885 46789999988642     34579


Q ss_pred             chHHHHHHHHHHHHHHHHhCCCccch-hHHHHHHHHHHHHHHhhhccc------cc-ch--hH-----------------
Q 046539          193 DIWPHIQALAADVISRTAFGSNYDDG-RKIFELIREQSHLFIEVSQFD------YI-PG--WR-----------------  245 (484)
Q Consensus       193 dl~~~~~~~~~~~i~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~------~~-p~--~~-----------------  245 (484)
                      |+.+++..+++|+++.++||...+.. +++.+....+...+.......      ++ |.  +.                 
T Consensus       172 ~~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  251 (516)
T PLN02183        172 NIGELIFTLTRNITYRAAFGSSSNEGQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDII  251 (516)
T ss_pred             eHHHHHHHHHHHHHHhHhhcCcccchHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999876543 233333333322211110001      11 11  11                 


Q ss_pred             HHHHHh---c------cCCchhHHHHHHHhhhHhh-------HHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHH
Q 046539          246 EEALRI---G------KASNDDLLGLLMESNYKEI-------QEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIML  309 (484)
Q Consensus       246 ~~~~~~---~------~~~~~~~l~~ll~~~~~~~-------~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L  309 (484)
                      .+..+.   .      ....+|+++.+++...++.       ......++++++..++.++++||+|||+++++|++++|
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L  331 (516)
T PLN02183        252 DDHIQKRKNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAEL  331 (516)
T ss_pred             HHHHHhhcccccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHH
Confidence            111111   1      0123578999887543211       00123589999999999999999999999999999999


Q ss_pred             hcChHHHHHHHHHHHHHhC-CCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCCeEEechhhh
Q 046539          310 CMHPIWQERARQEVFQVLG-NKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLSLPIILV  388 (484)
Q Consensus       310 ~~~p~~~~~l~~Ei~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~  388 (484)
                      ++||++|+|+++|++++++ ++.++++++++|||++|||+||||++|++|...|++.+|++++||.|||||.|.++.+++
T Consensus       332 a~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~  411 (516)
T PLN02183        332 MKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAI  411 (516)
T ss_pred             HhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEehhhh
Confidence            9999999999999999998 556899999999999999999999999999988999999999999999999999999999


Q ss_pred             hcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCC---
Q 046539          389 HHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAP---  465 (484)
Q Consensus       389 ~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~---  465 (484)
                      ||||++| +||++|+||||++++..........|+|||.|+|+|+|++||++|+++++++|+++|++++.++....+   
T Consensus       412 hrd~~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~  490 (516)
T PLN02183        412 GRDKNSW-EDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDM  490 (516)
T ss_pred             cCCcccc-CCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCCh
Confidence            9999999 999999999999754322112226899999999999999999999999999999999999877642211   


Q ss_pred             --CCcceeccCCCcceeeecC
Q 046539          466 --SSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       466 --~~~~~~~~~~~~~v~~~~~  484 (484)
                        ..+.+..+...+.+.+++|
T Consensus       491 ~~~~~~~~~~~~~~~~~~~~r  511 (516)
T PLN02183        491 NDVFGLTAPRATRLVAVPTYR  511 (516)
T ss_pred             hhccccccccCCCcEEEeecC
Confidence              1133333344667777665


No 8  
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=3.1e-72  Score=560.58  Aligned_cols=430  Identities=24%  Similarity=0.435  Sum_probs=340.0

Q ss_pred             chHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCC------------Ccc--ccccchHHHHHHHhCCce
Q 046539           28 KPKKLENFLRQQGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSD------------DIV--PRILPYHHHIISKYGKKS   93 (484)
Q Consensus        28 ~p~~~~~~~~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~------------~~~--~~~~~~~~~~~~~yG~vf   93 (484)
                      .|....+.++++++|||+.               ++.+.++++||            +.+  |+.+..+.+++++|||||
T Consensus       104 ~~~~~~~~~~~~~~pgp~l---------------aa~t~~ye~y~~~~~~~~~~G~l~~i~~g~~~~~l~~lh~kYGpI~  168 (633)
T PLN02738        104 FPATLRNGLAKLGPPGELL---------------AFLFTWVEAGEGYPKIPEAKGSISAVRGEAFFIPLYELFLTYGGIF  168 (633)
T ss_pred             chHHHHhhhhhCCCCCchH---------------HHHHcccccccccccCccccCcHHHhcCchHHHHHHHHHHHhCCEE
Confidence            3556667788899999986               22333444444            323  456788999999999999


Q ss_pred             EEeeCCcCeEEeCCHHHHHHHHhhCC-cccCCCCCc-cccccccceeecCCcchhHHHhhhccCCChHHHhhhHHHHHHH
Q 046539           94 FKWMGPRPSINVQDPKLIREILLKHD-IFQKPKGNS-LGKLVVNGMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLS  171 (484)
Q Consensus        94 ~~~~~~~~~vvv~dp~~i~~vl~~~~-~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~  171 (484)
                      ++++|+.++++|+||+++++++.++. .|++..... ...+.+.++++.+++.|+.+|+++.+.|+..+++.+++.+.+.
T Consensus       169 ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g~~l~~~dge~wr~rRr~l~p~Fs~~~v~~l~~~i~~~  248 (633)
T PLN02738        169 RLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMISLFGQA  248 (633)
T ss_pred             EEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccCCceecCCcHHHHHHHHhccHhhhHHHHHHHHHHHHHH
Confidence            99999999999999999999998765 677764433 2234567888899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHHHHHHHhCCCccc---hhHHHHHHHHHHHHHHhh----hc------c
Q 046539          172 CNHMIRKLFEIAASDEESFELDIWPHIQALAADVISRTAFGSNYDD---GRKIFELIREQSHLFIEV----SQ------F  238 (484)
Q Consensus       172 ~~~l~~~l~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~---~~~~~~~~~~~~~~~~~~----~~------~  238 (484)
                      ++++++.|.+...   .+..+|+.+.+..+++|+|+.++||.+++.   .+++...+..........    ..      .
T Consensus       249 v~~L~~~L~~~~~---~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  325 (633)
T PLN02738        249 SDRLCQKLDAAAS---DGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYTVLREAEDRSVSPIPVWEIPIW  325 (633)
T ss_pred             HHHHHHHHHHHhc---CCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHHHHHHHHHHhhcchhhhhhhHH
Confidence            9999999986533   355799999999999999999999998753   223322222222111100    00      0


Q ss_pred             cccchh-H--------------------HHHHHhc---------cCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHH
Q 046539          239 DYIPGW-R--------------------EEALRIG---------KASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECK  288 (484)
Q Consensus       239 ~~~p~~-~--------------------~~~~~~~---------~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~  288 (484)
                      ..+|.+ +                    ++..++.         .....++++.+++..        ..++++++.+++.
T Consensus       326 ~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~--------~~ls~~~L~~e~~  397 (633)
T PLN02738        326 KDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASG--------DDVSSKQLRDDLM  397 (633)
T ss_pred             hhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcC--------CCCCHHHHHHHHH
Confidence            011111 0                    0000000         012346777776542        2478999999999


Q ss_pred             HHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccc
Q 046539          289 LFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEET  368 (484)
Q Consensus       289 ~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~  368 (484)
                      .+++||+|||+++++|++++|++||++|+|+++|++++++++.++++++++||||+|||+|+||++|+++.++|++.+|.
T Consensus       398 ~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~~R~a~~d~  477 (633)
T PLN02738        398 TMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGDRFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLEND  477 (633)
T ss_pred             HHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCCCHHHHccCHHHHHHHHHHHhcCCCccccceeeccCc
Confidence            99999999999999999999999999999999999999987778999999999999999999999999999889999999


Q ss_pred             eecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchh-hhcCCCCcccccCCCCCCccchHHHHHHHHHHHH
Q 046539          369 KLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSK-AAKNNEVSFFPFGGGPRICIGQNFALMEVKLALA  447 (484)
Q Consensus       369 ~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~-~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~  447 (484)
                      +++||.|||||.|.++.+.+||||++| +||++|+||||+.+... ........++|||.|+|.|+|++||++|++++++
T Consensus       478 ~i~gy~IPkGT~V~~s~~~ihrdp~if-pdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA  556 (633)
T PLN02738        478 MLGGYPIKRGEDIFISVWNLHRSPKHW-DDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATA  556 (633)
T ss_pred             eECCEEECCCCEEEecHHHHhCCcccc-CCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHH
Confidence            999999999999999999999999999 99999999999853211 1112236899999999999999999999999999


Q ss_pred             HHHHhcEEEeCCCcc-cCCCCcceeccCCCcceeeecC
Q 046539          448 MILQNFSFQLSPTYV-HAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       448 ~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      .|+++|+|++.++.. .....+.++.|+++++|++++|
T Consensus       557 ~Llr~F~~el~~~~~~~~~~~~~~~~p~~~l~v~l~~R  594 (633)
T PLN02738        557 MLVRRFDFQLAPGAPPVKMTTGATIHTTEGLKMTVTRR  594 (633)
T ss_pred             HHHHhCeeEeCCCCCCcccccceEEeeCCCcEEEEEEC
Confidence            999999999986642 2223457788999999999987


No 9  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=4.9e-72  Score=557.77  Aligned_cols=422  Identities=20%  Similarity=0.308  Sum_probs=327.9

Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhC-CceEEeeCCcCeEEeCCHHHHHHHHhh
Q 046539           39 QGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYG-KKSFKWMGPRPSINVQDPKLIREILLK  117 (484)
Q Consensus        39 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG-~vf~~~~~~~~~vvv~dp~~i~~vl~~  117 (484)
                      +.||||+++|++||++++...                ...+.++.++.++|| ++|.+++|+.++|+++||++++++|.+
T Consensus        57 ~lPPGP~~lPiiGnl~~l~~~----------------~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~  120 (543)
T PLN02971         57 PLPPGPTGFPIVGMIPAMLKN----------------RPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQ  120 (543)
T ss_pred             CCCcCCCCCCcccchHHhccC----------------CcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHh
Confidence            468999999999999887420                012457899999999 799999999999999999999999998


Q ss_pred             CC-cccCCCCCccccccccc----eeecCCcchhHHHhhhccC-CChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcc
Q 046539          118 HD-IFQKPKGNSLGKLVVNG----MVTYEGEQWSKVRKIANPA-FHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFE  191 (484)
Q Consensus       118 ~~-~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~R~~~~~~-f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~  191 (484)
                      ++ .|+.++.......++++    ++..+|+.|+++|+++.+. +++..++.+.+.+.++++.+++.+.+...   .+.+
T Consensus       121 ~~~~f~~rp~~~~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~  197 (543)
T PLN02971        121 QDALFASRPLTYAQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVK---NSEP  197 (543)
T ss_pred             cchhhcCCCcccchhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCCc
Confidence            76 67777654444455554    6678899999999999754 55666677888888888888887765432   2346


Q ss_pred             cchHHHHHHHHHHHHHHHHhCCCccc------hh---HHHHHHHHHHHHHHhh---hcccccch---------hH-----
Q 046539          192 LDIWPHIQALAADVISRTAFGSNYDD------GR---KIFELIREQSHLFIEV---SQFDYIPG---------WR-----  245 (484)
Q Consensus       192 vdl~~~~~~~~~~~i~~~~fG~~~~~------~~---~~~~~~~~~~~~~~~~---~~~~~~p~---------~~-----  245 (484)
                      +|+.+.+..++++++++++||.+...      ++   +......++.......   ....++|.         ..     
T Consensus       198 vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~  277 (543)
T PLN02971        198 VDLRFVTRHYCGNAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRES  277 (543)
T ss_pred             eehHHHHHHHHHHHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHH
Confidence            99999999999999999999987521      11   1222233322211110   01112221         11     


Q ss_pred             ------------HHHHH---hcc-CCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHH
Q 046539          246 ------------EEALR---IGK-ASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIML  309 (484)
Q Consensus       246 ------------~~~~~---~~~-~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L  309 (484)
                                  ++..+   .+. ....|+++.+++...++   ....++++++.+++.++++||+|||+++++|++++|
T Consensus       278 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~~~---~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~L  354 (543)
T PLN02971        278 SAIMDKYHDPIIDERIKMWREGKRTQIEDFLDIFISIKDEA---GQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEM  354 (543)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCCCCcCHHHHHHhhhccc---CCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHH
Confidence                        01111   111 12468999998754221   112489999999999999999999999999999999


Q ss_pred             hcChHHHHHHHHHHHHHhC-CCCCChhhhccChhHHHHHHHhhcCCCCccc-ccccccccceecCEEeCCCCeEEechhh
Q 046539          310 CMHPIWQERARQEVFQVLG-NKEPKFDELNRLKMVGKIIYEVFRIYSPAYL-IFRTNVEETKLGDFILPPGVLLSLPIIL  387 (484)
Q Consensus       310 ~~~p~~~~~l~~Ei~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~G~~v~~~~~~  387 (484)
                      ++||++|+|+++||+++++ ++.++++++++|||++|||+|+||++|++|. ++|.+.+|++++||.|||||.|++++|+
T Consensus       355 a~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~  434 (543)
T PLN02971        355 INKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYG  434 (543)
T ss_pred             HhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHH
Confidence            9999999999999999998 5778999999999999999999999999998 7899999999999999999999999999


Q ss_pred             hhcCCCCccCCCCCCCCCCCCCcchhh-hcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccC--
Q 046539          388 VHHDHEYWGDDAKAFNPDRFSEGVSKA-AKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHA--  464 (484)
Q Consensus       388 ~~~d~~~~g~~p~~F~P~R~l~~~~~~-~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~--  464 (484)
                      +||||++| +||++|+||||+++.++. .......|+|||+|+|+|+|++||++|+++++++|+++|+|+++++....  
T Consensus       435 ~~~d~~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~  513 (543)
T PLN02971        435 LGRNPKVW-SDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVEL  513 (543)
T ss_pred             hcCChhhC-CCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcch
Confidence            99999999 999999999999753221 11122689999999999999999999999999999999999987643222  


Q ss_pred             -CCCcceeccCCCcceeeecC
Q 046539          465 -PSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       465 -~~~~~~~~~~~~~~v~~~~~  484 (484)
                       ...+ ++..++++.|.++||
T Consensus       514 ~~~~~-~~~~~~~~~~~~~~~  533 (543)
T PLN02971        514 MESSH-DMFLSKPLVMVGELR  533 (543)
T ss_pred             hhhcC-cccccccceeeeeec
Confidence             1223 554555888988887


No 10 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=2e-72  Score=556.18  Aligned_cols=410  Identities=20%  Similarity=0.324  Sum_probs=320.7

Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhC
Q 046539           39 QGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKH  118 (484)
Q Consensus        39 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~  118 (484)
                      +.||||+++|++||+..+.....          +   ..++.++.++.++||++|++++|++++|+++||+++++++.++
T Consensus        38 ~~PPgp~~~PiiGn~~~~~~~~~----------~---~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~  104 (490)
T PLN02500         38 NLPPGNMGWPFLGETIGYLKPYS----------A---TSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNE  104 (490)
T ss_pred             CCCCCCcCCCchhhHHHHHhhcc----------c---CChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCC
Confidence            36789999999999876542100          0   1456688999999999999999999999999999999999876


Q ss_pred             C-cccCCCCCcccccccc-ceeecCCcchhHHHhhhccCCChHHHhh-hHHHHHHHHHHHHHHHHHHHhcCCCCcccchH
Q 046539          119 D-IFQKPKGNSLGKLVVN-GMVTYEGEQWSKVRKIANPAFHQDKLKD-MLPKMYLSCNHMIRKLFEIAASDEESFELDIW  195 (484)
Q Consensus       119 ~-~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~R~~~~~~f~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~  195 (484)
                      + .|+.+.......++|. ++++.+|+.|+++|+++++.|+..+++. +.+.+.+.+..+++.|.       .+..+|+.
T Consensus       105 ~~~f~~~~~~~~~~~~g~~~~~~~~g~~wr~~Rk~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~-------~~~~vd~~  177 (490)
T PLN02500        105 GRLFECSYPRSIGGILGKWSMLVLVGDMHRDMRSISLNFLSHARLRTHLLKEVERHTLLVLDSWK-------ENSTFSAQ  177 (490)
T ss_pred             CCeEEeeCchHHHHHhCcccccccCCHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhC-------CCCCEEeh
Confidence            6 5643322222334454 6788899999999999999999998876 56777777777777764       23468999


Q ss_pred             HHHHHHHHHHHHHHHhCCCccch--hHHHHHHHHHHHHHHhhhcccccchh--H-----------------HHHHHh---
Q 046539          196 PHIQALAADVISRTAFGSNYDDG--RKIFELIREQSHLFIEVSQFDYIPGW--R-----------------EEALRI---  251 (484)
Q Consensus       196 ~~~~~~~~~~i~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~--~-----------------~~~~~~---  251 (484)
                      +.++.+++|++++++||.+.+..  +++...+.+.......  ....+|..  .                 ++..+.   
T Consensus       178 ~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  255 (490)
T PLN02500        178 DEAKKFTFNLMAKHIMSMDPGEEETEQLKKEYVTFMKGVVS--APLNFPGTAYRKALKSRATILKFIERKMEERIEKLKE  255 (490)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHhhhhc--chhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            99999999999999999875432  2222222222221111  11123321  1                 111110   


Q ss_pred             cc--CCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhC-
Q 046539          252 GK--ASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLG-  328 (484)
Q Consensus       252 ~~--~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~-  328 (484)
                      +.  ...+|+++.+++.         ..++++++++++.++++||+|||+++++|++++|++||++|+|+++|++++++ 
T Consensus       256 ~~~~~~~~d~l~~ll~~---------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~  326 (490)
T PLN02500        256 EDESVEEDDLLGWVLKH---------SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARA  326 (490)
T ss_pred             ccCCCCcchHHHHHHhc---------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhc
Confidence            11  1245788887763         14899999999999999999999999999999999999999999999999863 


Q ss_pred             -----CCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCC
Q 046539          329 -----NKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFN  403 (484)
Q Consensus       329 -----~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~  403 (484)
                           +..++++++++|||++|||+|+||++|+++.++|.+++|++++||.|||||.|+++++++||||++| +||++|+
T Consensus       327 ~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~-~dP~~F~  405 (490)
T PLN02500        327 KKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLY-DQPQLFN  405 (490)
T ss_pred             cccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCcccC-CCccccC
Confidence                 3457999999999999999999999999999889999999999999999999999999999999999 9999999


Q ss_pred             CCCCCCcchhhh------cCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCCCCcceeccCCCc
Q 046539          404 PDRFSEGVSKAA------KNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAPSSGITVYPQHGA  477 (484)
Q Consensus       404 P~R~l~~~~~~~------~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  477 (484)
                      ||||+++++...      .++ ..|+|||.|+|.|+|++||++|+++++++|+++|+|+++++....+..  ...+.+++
T Consensus       406 PeRfl~~~~~~~~~~~~~~~~-~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~~~~~--~~~~~~~l  482 (490)
T PLN02500        406 PWRWQQNNNRGGSSGSSSATT-NNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQAFAFP--FVDFPKGL  482 (490)
T ss_pred             hhhccCCCcccccccccCCCC-CCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCcceecc--cccCCCCc
Confidence            999997532211      122 679999999999999999999999999999999999987764433322  23556799


Q ss_pred             ceeeec
Q 046539          478 HMILNK  483 (484)
Q Consensus       478 ~v~~~~  483 (484)
                      +|++++
T Consensus       483 ~~~~~~  488 (490)
T PLN02500        483 PIRVRR  488 (490)
T ss_pred             eEEEEe
Confidence            999876


No 11 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=2.2e-71  Score=551.45  Aligned_cols=431  Identities=21%  Similarity=0.336  Sum_probs=333.6

Q ss_pred             HHHHHHhcchHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCC
Q 046539           20 KILNWAWLKPKKLENFLRQQGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGP   99 (484)
Q Consensus        20 ~~~~~~~~~p~~~~~~~~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~   99 (484)
                      .++++++.+|+.        .+|||+++|++|++..+.+                 +..+..+.+++++||++|++++|+
T Consensus        19 ~~~~~~~~~~~~--------~pPgp~~~p~~g~l~~~~~-----------------~~~~~~~~~~~~~yG~v~~i~~g~   73 (503)
T PLN02394         19 LLVSKLRGKKLK--------LPPGPAAVPIFGNWLQVGD-----------------DLNHRNLAEMAKKYGDVFLLRMGQ   73 (503)
T ss_pred             HHHHHHhcCcCC--------CCcCCCCCCeeeeHHhcCC-----------------CchhHHHHHHHHHhCCeEEEEcCC
Confidence            335666676665        7899999999999987632                 113568899999999999999999


Q ss_pred             cCeEEeCCHHHHHHHHhhCC-cccCCCCCc-cccccccc---eeecCCcchhHHHhhhc-cCCChHHHhhhHHHHHHHHH
Q 046539          100 RPSINVQDPKLIREILLKHD-IFQKPKGNS-LGKLVVNG---MVTYEGEQWSKVRKIAN-PAFHQDKLKDMLPKMYLSCN  173 (484)
Q Consensus       100 ~~~vvv~dp~~i~~vl~~~~-~~~~~~~~~-~~~~~g~~---~~~~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~  173 (484)
                      .++|+++||+.+++++.+++ .|.+++... ...+.|.+   ++..+|+.|+++|+.+. +.|+.+.++++.+.++++++
T Consensus        74 ~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~  153 (503)
T PLN02394         74 RNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAD  153 (503)
T ss_pred             eeEEEeCCHHHHHHHHHhCCccccCCCCcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHH
Confidence            99999999999999998765 566554322 22333333   66678999999999996 88999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCcccchHHHHHHHHHHHHHHHHhCCCccchhH-HHHHHHHH----HHHHHh--hhcccccc----
Q 046539          174 HMIRKLFEIAASDEESFELDIWPHIQALAADVISRTAFGSNYDDGRK-IFELIREQ----SHLFIE--VSQFDYIP----  242 (484)
Q Consensus       174 ~l~~~l~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~-~~~~~~~~----~~~~~~--~~~~~~~p----  242 (484)
                      ++++.|.+....  ++..+|+.++++.+++|+++.++||.+++..++ ....+...    ......  .....++|    
T Consensus       154 ~lv~~l~~~~~~--~~~~v~~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (503)
T PLN02394        154 LVVEDVRANPEA--ATEGVVIRRRLQLMMYNIMYRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRP  231 (503)
T ss_pred             HHHHHHHHhhhc--cCCcEecHHHHHHHHHHHHHHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHH
Confidence            999999865322  234589999999999999999999998753221 11111111    111000  00001111    


Q ss_pred             ---hhH-------------------HHHHHh------ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcc
Q 046539          243 ---GWR-------------------EEALRI------GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAG  294 (484)
Q Consensus       243 ---~~~-------------------~~~~~~------~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG  294 (484)
                         .+.                   ++..+.      ......|+++.+++...+      +.++++++..++.++++||
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~------~~l~~~~i~~~~~~~~~AG  305 (503)
T PLN02394        232 FLRGYLKICQDVKERRLALFKDYFVDERKKLMSAKGMDKEGLKCAIDHILEAQKK------GEINEDNVLYIVENINVAA  305 (503)
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcchhhhHHHHHHhcccc------CCCCHHHHHHHHHHHHHhc
Confidence               100                   000110      011235788888875432      3489999999999999999


Q ss_pred             cccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhC-CCCCChhhhccChhHHHHHHHhhcCCCCccc-ccccccccceecC
Q 046539          295 QETTASLLVWVLIMLCMHPIWQERARQEVFQVLG-NKEPKFDELNRLKMVGKIIYEVFRIYSPAYL-IFRTNVEETKLGD  372 (484)
Q Consensus       295 ~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g  372 (484)
                      +|||+++++|++++|++||++|+|+++||+++++ ++.++++++++|||++|||+|+||++|++|. .+|.+.+|++++|
T Consensus       306 ~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g  385 (503)
T PLN02394        306 IETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGG  385 (503)
T ss_pred             hhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCC
Confidence            9999999999999999999999999999999998 4567899999999999999999999999998 5799999999999


Q ss_pred             EEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhh-hcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHH
Q 046539          373 FILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKA-AKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQ  451 (484)
Q Consensus       373 ~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~-~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~  451 (484)
                      |.||+||.|.++++++||||++| +||++|+||||++.++.. ......+++|||.|+|+|+|++||++|+++++++|++
T Consensus       386 ~~IP~Gt~V~~~~~~~~rd~~~~-~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~  464 (503)
T PLN02394        386 YDIPAESKILVNAWWLANNPELW-KNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQ  464 (503)
T ss_pred             EEeCCCCEEEEchHHHhCCcccC-CCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999 999999999999753211 1112368999999999999999999999999999999


Q ss_pred             hcEEEeCCCcc-cCC--CCc-ceeccCCCcceeeecC
Q 046539          452 NFSFQLSPTYV-HAP--SSG-ITVYPQHGAHMILNKL  484 (484)
Q Consensus       452 ~f~~~~~~~~~-~~~--~~~-~~~~~~~~~~v~~~~~  484 (484)
                      +|++++.++.+ ..+  ..+ +++..+.++.|+++||
T Consensus       465 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  501 (503)
T PLN02394        465 NFELLPPPGQSKIDVSEKGGQFSLHIAKHSTVVFKPR  501 (503)
T ss_pred             HceeEeCCCCCcCccccccCceeeccCCCceEEeecC
Confidence            99999877642 322  232 5564556899999998


No 12 
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=1.7e-71  Score=548.88  Aligned_cols=421  Identities=20%  Similarity=0.318  Sum_probs=334.0

Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhC
Q 046539           39 QGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKH  118 (484)
Q Consensus        39 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~  118 (484)
                      +.||||+++|++||++.+..                  +++.++.+++++||++|++++|+.++|+++||+++++++.+.
T Consensus        31 ~~pPgp~~~Pl~G~l~~~~~------------------~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~   92 (504)
T PLN00110         31 KLPPGPRGWPLLGALPLLGN------------------MPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTL   92 (504)
T ss_pred             CCcccCCCCCeeechhhcCC------------------chHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhc
Confidence            46899999999999876531                  356789999999999999999999999999999999999876


Q ss_pred             C-cccCCCCCc-cc-cccc--cceeecCCcchhHHHhhhcc-CCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 046539          119 D-IFQKPKGNS-LG-KLVV--NGMVTYEGEQWSKVRKIANP-AFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFEL  192 (484)
Q Consensus       119 ~-~~~~~~~~~-~~-~~~g--~~~~~~~~~~~~~~R~~~~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~v  192 (484)
                      . .|++++... .. ...+  +++++.+|+.|+++|+++++ .|+.++++.+.+.+.++++.+++.+.+...   ++..+
T Consensus        93 ~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~---~g~~~  169 (504)
T PLN00110         93 DINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQ---RGEPV  169 (504)
T ss_pred             chhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhcc---CCCcE
Confidence            6 677765432 11 2233  35667789999999999984 799999999999999999999999876432   34578


Q ss_pred             chHHHHHHHHHHHHHHHHhCCCc-cc----hhHHHHHHHHHHHHHHhhhcccccc--------hhH--------------
Q 046539          193 DIWPHIQALAADVISRTAFGSNY-DD----GRKIFELIREQSHLFIEVSQFDYIP--------GWR--------------  245 (484)
Q Consensus       193 dl~~~~~~~~~~~i~~~~fG~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~p--------~~~--------------  245 (484)
                      |+.+++..++.|+++.++||.+. ..    .+++..................++|        .+.              
T Consensus       170 ~~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~  249 (504)
T PLN00110        170 VVPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLL  249 (504)
T ss_pred             eHHHHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHH
Confidence            99999999999999999999875 11    1223333333322111110001111        110              


Q ss_pred             ----HHHHHhcc--CCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHH
Q 046539          246 ----EEALRIGK--ASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERA  319 (484)
Q Consensus       246 ----~~~~~~~~--~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l  319 (484)
                          .+..+...  ....|+++.+++.....   .+..++++++.+++.++++||+|||+++++|++++|++||++|+|+
T Consensus       250 ~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~---~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl  326 (504)
T PLN00110        250 TRMIEEHTASAHERKGNPDFLDVVMANQENS---TGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRA  326 (504)
T ss_pred             HHHHHHHHhhccccccCCChhhHHhhccccc---CCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHH
Confidence                00011111  12458999888653221   2346899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhC-CCCCChhhhccChhHHHHHHHhhcCCCCccc-ccccccccceecCEEeCCCCeEEechhhhhcCCCCccC
Q 046539          320 RQEVFQVLG-NKEPKFDELNRLKMVGKIIYEVFRIYSPAYL-IFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGD  397 (484)
Q Consensus       320 ~~Ei~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~  397 (484)
                      ++|++++++ .+.++++++++|||++|||+||||++|+++. ++|.+.+|++++||.|||||.|.++.+++||||++| +
T Consensus       327 ~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~-~  405 (504)
T PLN00110        327 HEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVW-E  405 (504)
T ss_pred             HHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhc-C
Confidence            999999988 4568999999999999999999999999998 789999999999999999999999999999999999 9


Q ss_pred             CCCCCCCCCCCCcchhhhcC--CCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccC--CCCcceecc
Q 046539          398 DAKAFNPDRFSEGVSKAAKN--NEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHA--PSSGITVYP  473 (484)
Q Consensus       398 ~p~~F~P~R~l~~~~~~~~~--~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~--~~~~~~~~~  473 (484)
                      ||++|+||||+++.......  ....++|||.|+|.|+|++||++|+++++++|+++|+|++.++....  ...+.++.|
T Consensus       406 dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  485 (504)
T PLN00110        406 NPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLALQK  485 (504)
T ss_pred             CcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCccccccccccc
Confidence            99999999999753221111  11479999999999999999999999999999999999988764332  234677789


Q ss_pred             CCCcceeeecC
Q 046539          474 QHGAHMILNKL  484 (484)
Q Consensus       474 ~~~~~v~~~~~  484 (484)
                      ..+++|++++|
T Consensus       486 ~~~~~~~~~~r  496 (504)
T PLN00110        486 AVPLSAMVTPR  496 (504)
T ss_pred             CCCceEeeccC
Confidence            99999999987


No 13 
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=9.5e-72  Score=554.03  Aligned_cols=422  Identities=22%  Similarity=0.320  Sum_probs=331.6

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCC
Q 046539           40 GFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHD  119 (484)
Q Consensus        40 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~  119 (484)
                      .||||+++|++||++.+..                  +++.++.++.++||++|++++|+.++|+++||+++++++.++.
T Consensus        35 ~pPgp~~~P~iG~~~~~~~------------------~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~   96 (517)
T PLN02687         35 LPPGPRGWPVLGNLPQLGP------------------KPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHD   96 (517)
T ss_pred             CCccCCCCCccccHHhcCC------------------chhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcc
Confidence            5789999999999887632                  4567899999999999999999999999999999999998765


Q ss_pred             -cccCCCCCcccccc---c-cceeecCCcchhHHHhhhc-cCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 046539          120 -IFQKPKGNSLGKLV---V-NGMVTYEGEQWSKVRKIAN-PAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELD  193 (484)
Q Consensus       120 -~~~~~~~~~~~~~~---g-~~~~~~~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vd  193 (484)
                       .|++++.......+   + .+++..+|+.|+++|+++. +.|+.++++++.+.+.++++++++.|.+..    ++..+|
T Consensus        97 ~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~----~~~~vd  172 (517)
T PLN02687         97 ANFSNRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQH----GTAPVN  172 (517)
T ss_pred             hhhhcCCCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhc----CCCcee
Confidence             67776543322222   2 3355567999999999998 789999999999999999999999997641    335799


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCccc---h---hHHHHHHHHHHHHHHhhhcccccc--------hh-H-------------
Q 046539          194 IWPHIQALAADVISRTAFGSNYDD---G---RKIFELIREQSHLFIEVSQFDYIP--------GW-R-------------  245 (484)
Q Consensus       194 l~~~~~~~~~~~i~~~~fG~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~p--------~~-~-------------  245 (484)
                      +.+++..+++|+++.++||.++..   .   +++...+..+...........++|        .. .             
T Consensus       173 ~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~  252 (517)
T PLN02687        173 LGQLVNVCTTNALGRAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMM  252 (517)
T ss_pred             HHHHHHHHHHHHHHHHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHH
Confidence            999999999999999999987531   1   223333333322211110001111        10 0             


Q ss_pred             ----HHHHHhc---cCCchhHHHHHHHhhhHhh-HHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHH
Q 046539          246 ----EEALRIG---KASNDDLLGLLMESNYKEI-QEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQE  317 (484)
Q Consensus       246 ----~~~~~~~---~~~~~~~l~~ll~~~~~~~-~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~  317 (484)
                          ++..+..   ....+|+++.+++...++. .+.+..++++++.+++..+++||+|||+++++|++++|++||++|+
T Consensus       253 ~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~  332 (517)
T PLN02687        253 NGIIEEHKAAGQTGSEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILK  332 (517)
T ss_pred             HHHHHHHHHhccccCcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHH
Confidence                1111111   1234689999987643210 0123358999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhC-CCCCChhhhccChhHHHHHHHhhcCCCCccc-ccccccccceecCEEeCCCCeEEechhhhhcCCCCc
Q 046539          318 RARQEVFQVLG-NKEPKFDELNRLKMVGKIIYEVFRIYSPAYL-IFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYW  395 (484)
Q Consensus       318 ~l~~Ei~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~  395 (484)
                      ++++|++++++ ++.++.+++++|||++|||+|+||++|+++. ++|.+.+|++++||.||+||.|.++.+++||||++|
T Consensus       333 kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~  412 (517)
T PLN02687        333 KAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQW  412 (517)
T ss_pred             HHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccC
Confidence            99999999987 5678999999999999999999999999997 799999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCcchhh---hcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCC-----CC
Q 046539          396 GDDAKAFNPDRFSEGVSKA---AKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAP-----SS  467 (484)
Q Consensus       396 g~~p~~F~P~R~l~~~~~~---~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~-----~~  467 (484)
                       +||++|+||||+++....   .......++|||.|+|.|+|++||++|+++++++|+++|++++.++....+     ..
T Consensus       413 -~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  491 (517)
T PLN02687        413 -PDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAY  491 (517)
T ss_pred             -CCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCccccc
Confidence             999999999999753211   011225799999999999999999999999999999999999886643211     22


Q ss_pred             cceeccCCCcceeeecC
Q 046539          468 GITVYPQHGAHMILNKL  484 (484)
Q Consensus       468 ~~~~~~~~~~~v~~~~~  484 (484)
                      +.++.+..+++|+++||
T Consensus       492 ~~~~~~~~~~~~~~~~R  508 (517)
T PLN02687        492 GLTLQRAVPLMVHPRPR  508 (517)
T ss_pred             ceeeecCCCeEEeeccC
Confidence            34445667788888877


No 14 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=5.2e-71  Score=549.80  Aligned_cols=445  Identities=20%  Similarity=0.334  Sum_probs=341.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHH
Q 046539            7 SAFATIILAYCAWKILNWAWLKPKKLENFLRQQGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHII   86 (484)
Q Consensus         7 ~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (484)
                      +.++++++++++++++.+...++..        .+|||+++|++||+.++..                  +++.++.+++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~ppgp~~~pl~G~~~~~~~------------------~~~~~~~~~~   61 (514)
T PLN03112          8 LLFSVLIFNVLIWRWLNASMRKSLR--------LPPGPPRWPIVGNLLQLGP------------------LPHRDLASLC   61 (514)
T ss_pred             HHHHHHHHHHHHHHHccccccCCCC--------CccCCCCCCeeeeHHhcCC------------------chHHHHHHHH
Confidence            3444555555666655543333333        6899999999999987632                  3567899999


Q ss_pred             HHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCC-cccCCCCCc--cccccccc--eeecCCcchhHHHhhhc-cCCChHH
Q 046539           87 SKYGKKSFKWMGPRPSINVQDPKLIREILLKHD-IFQKPKGNS--LGKLVVNG--MVTYEGEQWSKVRKIAN-PAFHQDK  160 (484)
Q Consensus        87 ~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~-~~~~~~~~~--~~~~~g~~--~~~~~~~~~~~~R~~~~-~~f~~~~  160 (484)
                      ++||++|++++++.++++++||+++++++.++. .|++++...  ....+|.+  ++..+|+.|+.+|+++. +.|+.++
T Consensus        62 ~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~  141 (514)
T PLN03112         62 KKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKR  141 (514)
T ss_pred             HHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHH
Confidence            999999999999999999999999999997665 777765432  22234433  45678999999999965 6899999


Q ss_pred             HhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHHHHHHHhCCCccch--------hHHHHHHHHHHHHH
Q 046539          161 LKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHIQALAADVISRTAFGSNYDDG--------RKIFELIREQSHLF  232 (484)
Q Consensus       161 l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~--------~~~~~~~~~~~~~~  232 (484)
                      ++.+.+.+.++++.+++.+.+...   .+..+|+.+.++.+++++++.++||.++...        .++......+....
T Consensus       142 l~~~~~~~~~~~~~lv~~l~~~~~---~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (514)
T PLN03112        142 LESFAKHRAEEARHLIQDVWEAAQ---TGKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLL  218 (514)
T ss_pred             HHHhhHHHHHHHHHHHHHHHHhhc---cCCeeeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHc
Confidence            999999999999999998765432   3457999999999999999999999875211        12222223222211


Q ss_pred             Hhhhcccccchh---------H-----------------HHHHHh--c---cCCchhHHHHHHHhhhHhhHHhhcCCCHH
Q 046539          233 IEVSQFDYIPGW---------R-----------------EEALRI--G---KASNDDLLGLLMESNYKEIQEKEAGMSIE  281 (484)
Q Consensus       233 ~~~~~~~~~p~~---------~-----------------~~~~~~--~---~~~~~~~l~~ll~~~~~~~~~~~~~l~~~  281 (484)
                      .......++|.+         .                 .+..+.  .   .....|+++.++++..++   ....++++
T Consensus       219 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~---~~~~l~~~  295 (514)
T PLN03112        219 GVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRARSGKLPGGKDMDFVDVLLSLPGEN---GKEHMDDV  295 (514)
T ss_pred             CCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCccchHHHHHHHhhccc---cccCCCHH
Confidence            110111111110         1                 001111  1   112358999988754321   12358999


Q ss_pred             HHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhC-CCCCChhhhccChhHHHHHHHhhcCCCCccc-
Q 046539          282 EVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLG-NKEPKFDELNRLKMVGKIIYEVFRIYSPAYL-  359 (484)
Q Consensus       282 ~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-  359 (484)
                      ++.+++..+++||+|||+++++|++++|++||++|+++++|++++++ ++.++++++++|||++|||+|++|++|+++. 
T Consensus       296 ~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~  375 (514)
T PLN03112        296 EIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFL  375 (514)
T ss_pred             HHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccc
Confidence            99999999999999999999999999999999999999999999988 4568999999999999999999999999997 


Q ss_pred             ccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchh--h-hcCCCCcccccCCCCCCccchH
Q 046539          360 IFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSK--A-AKNNEVSFFPFGGGPRICIGQN  436 (484)
Q Consensus       360 ~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~--~-~~~~~~~~~~Fg~G~r~C~G~~  436 (484)
                      ++|.+.+|++++||.|||||.|.++++++||||++| +||++|+||||..+.+.  . ......+++|||.|+|.|+|++
T Consensus       376 ~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~-~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~  454 (514)
T PLN03112        376 IPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIW-DDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAP  454 (514)
T ss_pred             cccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccC-CChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHH
Confidence            689999999999999999999999999999999999 99999999998654221  1 1112257999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcEEEeCCCcccCC-----CCcceeccCCCcceeeecC
Q 046539          437 FALMEVKLALAMILQNFSFQLSPTYVHAP-----SSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       437 la~~~~~~~l~~ll~~f~~~~~~~~~~~~-----~~~~~~~~~~~~~v~~~~~  484 (484)
                      ||++|+++++++|+++|+|++.++.....     ..+.++.+.++++|+++||
T Consensus       455 ~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  507 (514)
T PLN03112        455 LGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVATPR  507 (514)
T ss_pred             HHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEeecC
Confidence            99999999999999999999875532111     2245556678999999998


No 15 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=5e-71  Score=549.13  Aligned_cols=428  Identities=18%  Similarity=0.330  Sum_probs=332.1

Q ss_pred             HHhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHH
Q 046539           36 LRQQGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREIL  115 (484)
Q Consensus        36 ~~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl  115 (484)
                      .+.+.+|||+++|++||+..+...               ..+++.++.+++++||++|++++|+.++|+++||+++++++
T Consensus        32 ~~~~lpPgp~~~pl~G~l~~~~~~---------------~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il   96 (519)
T PLN00168         32 KGRRLPPGPPAVPLLGSLVWLTNS---------------SADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAAL   96 (519)
T ss_pred             CCCCCCcCCCCCcccccHHhhccc---------------cccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHH
Confidence            344568899999999998765310               01356789999999999999999999999999999999999


Q ss_pred             hhCC-cccCCCCCcccccccc--ceee--cCCcchhHHHh-hhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCC
Q 046539          116 LKHD-IFQKPKGNSLGKLVVN--GMVT--YEGEQWSKVRK-IANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEES  189 (484)
Q Consensus       116 ~~~~-~~~~~~~~~~~~~~g~--~~~~--~~~~~~~~~R~-~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~  189 (484)
                      .++. .|+.++......+++.  +++.  .+|+.|+++|| ++.+.|+.++++++.+.+.++++.+++.|.+...   .+
T Consensus        97 ~~~~~~f~~rp~~~~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~---~~  173 (519)
T PLN00168         97 VERGAALADRPAVASSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAE---DA  173 (519)
T ss_pred             HhcCCccccCCcccchhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcC---CC
Confidence            8766 6776554333344443  3443  67999999986 7889999999999999999999999999986432   23


Q ss_pred             cccchHHHHHHHHHHHHHHHHhCCCccchh--HHHHHHHHHHHHHHh-hhcccccchh---------H------------
Q 046539          190 FELDIWPHIQALAADVISRTAFGSNYDDGR--KIFELIREQSHLFIE-VSQFDYIPGW---------R------------  245 (484)
Q Consensus       190 ~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~p~~---------~------------  245 (484)
                      ..+|+.+.+..++.++++.++||.++++..  .+............. .....++|.+         .            
T Consensus       174 ~~v~~~~~~~~~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~  253 (519)
T PLN00168        174 AAPRVVETFQYAMFCLLVLMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKEL  253 (519)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHH
Confidence            358899999999999999999999875321  111211111110100 0001112211         0            


Q ss_pred             -----HHHHHhc------cC-------CchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHH
Q 046539          246 -----EEALRIG------KA-------SNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLI  307 (484)
Q Consensus       246 -----~~~~~~~------~~-------~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~  307 (484)
                           ++..+..      ..       ...|+++.+++....+  +.+..++++++.+++.++++||+|||+++++|+++
T Consensus       254 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~  331 (519)
T PLN00168        254 FVPLIDARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPE--DGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMA  331 (519)
T ss_pred             HHHHHHHHHHHhhhccccCccccccccccccHHHHHHhhhccc--cccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence                 1111110      00       1357889888654321  12245999999999999999999999999999999


Q ss_pred             HHhcChHHHHHHHHHHHHHhCC--CCCChhhhccChhHHHHHHHhhcCCCCccc-ccccccccceecCEEeCCCCeEEec
Q 046539          308 MLCMHPIWQERARQEVFQVLGN--KEPKFDELNRLKMVGKIIYEVFRIYSPAYL-IFRTNVEETKLGDFILPPGVLLSLP  384 (484)
Q Consensus       308 ~L~~~p~~~~~l~~Ei~~~~~~--~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~G~~v~~~  384 (484)
                      +|++||++|+|+++||++++++  +.++++++++|||++|||+|+||++|+++. ++|.+.+|++++||.|||||.|.++
T Consensus       332 ~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~  411 (519)
T PLN00168        332 ELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFM  411 (519)
T ss_pred             HHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEC
Confidence            9999999999999999999973  568999999999999999999999999987 5899999999999999999999999


Q ss_pred             hhhhhcCCCCccCCCCCCCCCCCCCcchhh----hcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCC
Q 046539          385 IILVHHDHEYWGDDAKAFNPDRFSEGVSKA----AKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPT  460 (484)
Q Consensus       385 ~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~----~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~  460 (484)
                      ++++||||++| +||++|+||||++.....    .......++|||.|+|+|+|++||++|++++++.|+++|+|++.++
T Consensus       412 ~~~~~~d~~~~-~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~  490 (519)
T PLN00168        412 VAEMGRDEREW-ERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPG  490 (519)
T ss_pred             hHHHhcCcccc-CCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCC
Confidence            99999999999 999999999999742210    1112257999999999999999999999999999999999998765


Q ss_pred             cccCC--CCcceeccCCCcceeeecC
Q 046539          461 YVHAP--SSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       461 ~~~~~--~~~~~~~~~~~~~v~~~~~  484 (484)
                      ....+  ..+++..+.++++|++++|
T Consensus       491 ~~~~~~~~~~~~~~~~~~~~~~~~~R  516 (519)
T PLN00168        491 DEVDFAEKREFTTVMAKPLRARLVPR  516 (519)
T ss_pred             CcCChhhhceeEEeecCCcEEEEEec
Confidence            33322  2346677888999999987


No 16 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=6.9e-71  Score=546.39  Aligned_cols=399  Identities=22%  Similarity=0.351  Sum_probs=316.3

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCC
Q 046539           40 GFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHD  119 (484)
Q Consensus        40 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~  119 (484)
                      .||||+++|++||+.++..                 .+++.++.+|+++||++|++++++.++|+++||+++++++.++.
T Consensus        30 ~ppgp~~~p~~G~l~~l~~-----------------~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~   92 (502)
T PLN02966         30 LPPGPSPLPVIGNLLQLQK-----------------LNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQD   92 (502)
T ss_pred             CCcCCCCCCeeccHHhcCC-----------------CChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCc
Confidence            6899999999999987631                 14667899999999999999999999999999999999998765


Q ss_pred             -cccCCCCCcccccc--ccc-e-eecCCcchhHHHhh-hccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 046539          120 -IFQKPKGNSLGKLV--VNG-M-VTYEGEQWSKVRKI-ANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELD  193 (484)
Q Consensus       120 -~~~~~~~~~~~~~~--g~~-~-~~~~~~~~~~~R~~-~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vd  193 (484)
                       .|.+++........  |.+ + +..+|+.|+.+|++ +.+.|+.++++.+.+.+.++++++++.|.+...   +++.+|
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~---~~~~vd  169 (502)
T PLN02966         93 VNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAAD---KSEVVD  169 (502)
T ss_pred             ccccCCCCCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCCcee
Confidence             67655433222222  222 2 44579999999998 778999999999999999999999999976432   345799


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCccchh-H---HHHHHHHHHHHHHhhhccccc---------chhH--------------H
Q 046539          194 IWPHIQALAADVISRTAFGSNYDDGR-K---IFELIREQSHLFIEVSQFDYI---------PGWR--------------E  246 (484)
Q Consensus       194 l~~~~~~~~~~~i~~~~fG~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~---------p~~~--------------~  246 (484)
                      +.+++..+++|+++.++||.+++..+ +   +.+.+..............++         +.+.              .
T Consensus       170 l~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (502)
T PLN02966        170 ISELMLTFTNSVVCRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQ  249 (502)
T ss_pred             HHHHHHHHHHHHHHHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999875322 2   222222211111110000111         1111              0


Q ss_pred             HHH----Hhc--cCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHH
Q 046539          247 EAL----RIG--KASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERAR  320 (484)
Q Consensus       247 ~~~----~~~--~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~  320 (484)
                      ...    ...  ....+++++.+++...++  ..+..++++++.+++.++++||+|||+++++|++++|++||++|+|++
T Consensus       250 ~~i~~~~~~~~~~~~~~~~l~~l~~~~~~~--~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~  327 (502)
T PLN02966        250 EVVNETLDPKRVKPETESMIDLLMEIYKEQ--PFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQ  327 (502)
T ss_pred             HHHHHHHhccccccccccHHHHHHHHHhcc--CcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHH
Confidence            000    101  112457888888654321  112358999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhCC---CCCChhhhccChhHHHHHHHhhcCCCCccc-ccccccccceecCEEeCCCCeEEechhhhhcCCCCcc
Q 046539          321 QEVFQVLGN---KEPKFDELNRLKMVGKIIYEVFRIYSPAYL-IFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWG  396 (484)
Q Consensus       321 ~Ei~~~~~~---~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g  396 (484)
                      +|++++++.   +.++++++++|||++|||+|+||++|+++. ++|.+.+|++++||.|||||.|.++++++||||++||
T Consensus       328 ~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g  407 (502)
T PLN02966        328 AEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWG  407 (502)
T ss_pred             HHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCccccc
Confidence            999999862   357999999999999999999999999998 6899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCc
Q 046539          397 DDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTY  461 (484)
Q Consensus       397 ~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~  461 (484)
                      +||++|+||||+++..+. ......|+|||.|+|.|+|++||++|+++++++|+++|+|++.++.
T Consensus       408 ~dP~~F~PeRwl~~~~~~-~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~  471 (502)
T PLN02966        408 PNPDEFRPERFLEKEVDF-KGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGM  471 (502)
T ss_pred             CChhhCChhhhcCCCCCc-CCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCC
Confidence            999999999999753321 1123689999999999999999999999999999999999988764


No 17 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=6.8e-71  Score=548.78  Aligned_cols=418  Identities=19%  Similarity=0.282  Sum_probs=325.1

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHh---CCceEEeeCCcCeEEeCCHHHHHHHHh
Q 046539           40 GFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKY---GKKSFKWMGPRPSINVQDPKLIREILL  116 (484)
Q Consensus        40 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y---G~vf~~~~~~~~~vvv~dp~~i~~vl~  116 (484)
                      ++|||+++|++||+..+..                  + +..+.+|.++|   |++|.+++|+.+.++++||+++++++.
T Consensus        31 ~~pgp~~~p~~G~~~~~~~------------------~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~   91 (516)
T PLN03195         31 NRKGPKSWPIIGAALEQLK------------------N-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLK   91 (516)
T ss_pred             ccCCCCCCCeecchHHHHh------------------c-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHh
Confidence            6899999999999876543                  1 12456777777   899999999999999999999999998


Q ss_pred             hCC-cccCCCCCc--cccccccceeecCCcchhHHHhhhccCCChHHHhhhHHHH-HHHHHHHHHHHHHHHhcCCCCccc
Q 046539          117 KHD-IFQKPKGNS--LGKLVVNGMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKM-YLSCNHMIRKLFEIAASDEESFEL  192 (484)
Q Consensus       117 ~~~-~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i-~~~~~~l~~~l~~~~~~~~~~~~v  192 (484)
                      ++. .|.+...+.  ...++|.++++.+|+.|+++|+++++.|+.++++.+.+.+ .+.++.+++.+.+...   .+..+
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~g~~w~~~Rr~l~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~---~~~~v  168 (516)
T PLN03195         92 TNFANYPKGEVYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTVVFREYSLKLSSILSQASF---ANQVV  168 (516)
T ss_pred             hCccccCCcHhHHHHHHHHhcCeeeccCcHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCeE
Confidence            753 566654332  2345678888899999999999999999999999999876 6667777777765322   34579


Q ss_pred             chHHHHHHHHHHHHHHHHhCCCccch------hHHHHHHHHHHHHHH-hhh-c----ccccc--hh---H----------
Q 046539          193 DIWPHIQALAADVISRTAFGSNYDDG------RKIFELIREQSHLFI-EVS-Q----FDYIP--GW---R----------  245 (484)
Q Consensus       193 dl~~~~~~~~~~~i~~~~fG~~~~~~------~~~~~~~~~~~~~~~-~~~-~----~~~~p--~~---~----------  245 (484)
                      |+.++++.+++|+++.++||.+++..      ..+.+.......... ... .    ..+++  ..   .          
T Consensus       169 d~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (516)
T PLN03195        169 DMQDLFMRMTLDSICKVGFGVEIGTLSPSLPENPFAQAFDTANIIVTLRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFT  248 (516)
T ss_pred             cHHHHHHHHHHHHHHHHHhCCCccccccCCCccHHHHHHHHHHHHHHHHHhcchhhHHHhcccchHHHHHHHHHHHHHHH
Confidence            99999999999999999999876431      123222222211110 000 0    00011  00   0          


Q ss_pred             ----HHHHHh---c----cCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChH
Q 046539          246 ----EEALRI---G----KASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPI  314 (484)
Q Consensus       246 ----~~~~~~---~----~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~  314 (484)
                          ++..+.   .    ....+|+++.+++...+    .+..++++++.+++.++++||+|||+++++|++++|++||+
T Consensus       249 ~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~----~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~  324 (516)
T PLN03195        249 YSVIRRRKAEMDEARKSGKKVKHDILSRFIELGED----PDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPH  324 (516)
T ss_pred             HHHHHHHHHHHhccccccccccccHHHHHHhccCC----CCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHH
Confidence                111111   0    01245788888865322    13358999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC---------------------CCCChhhhccChhHHHHHHHhhcCCCCccccccccccccee-cC
Q 046539          315 WQERARQEVFQVLGN---------------------KEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKL-GD  372 (484)
Q Consensus       315 ~~~~l~~Ei~~~~~~---------------------~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i-~g  372 (484)
                      +|+|+++|+++++++                     +.++++++++|||++|||+||||++|++|...|.+.+|.++ +|
T Consensus       325 vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G  404 (516)
T PLN03195        325 VAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDG  404 (516)
T ss_pred             HHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCC
Confidence            999999999987642                     35789999999999999999999999999988888887766 99


Q ss_pred             EEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHh
Q 046539          373 FILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQN  452 (484)
Q Consensus       373 ~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~  452 (484)
                      |.|||||.|.++.+++||||++||+||++|+||||+++.......+ ..++|||+|+|.|+|++||++|++++++.|+++
T Consensus       405 ~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~-~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~  483 (516)
T PLN03195        405 TKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASP-FKFTAFQAGPRICLGKDSAYLQMKMALALLCRF  483 (516)
T ss_pred             cEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCcCCCCC-ceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999996422111222 679999999999999999999999999999999


Q ss_pred             cEEEeCCCcccCCCCcceeccCCCcceeeecC
Q 046539          453 FSFQLSPTYVHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       453 f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      |++++.++.+.......+..|+++++|++++|
T Consensus       484 f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~r  515 (516)
T PLN03195        484 FKFQLVPGHPVKYRMMTILSMANGLKVTVSRR  515 (516)
T ss_pred             ceeEecCCCcceeeeeeEEecCCCEEEEEEeC
Confidence            99998766443333345678999999999987


No 18 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=6.4e-71  Score=541.07  Aligned_cols=405  Identities=18%  Similarity=0.255  Sum_probs=323.2

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCC
Q 046539           40 GFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHD  119 (484)
Q Consensus        40 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~  119 (484)
                      .+|||+++|++||+..+.+                  ++..++++++++||++|++++|+.++++++||+++++++.++.
T Consensus        32 ~ppgp~~~P~~G~~~~~~~------------------~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~   93 (463)
T PLN02774         32 LPPGTMGWPLFGETTEFLK------------------QGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEG   93 (463)
T ss_pred             CCCCCCCCCchhhHHHHHH------------------hhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCC
Confidence            4689999999999988754                  3345889999999999999999999999999999999998765


Q ss_pred             -cccCCCCCcccccccc-ceeecCCcchhHHHhhhccCCChHHHhh-hHHHHHHHHHHHHHHHHHHHhcCCCCcccchHH
Q 046539          120 -IFQKPKGNSLGKLVVN-GMVTYEGEQWSKVRKIANPAFHQDKLKD-MLPKMYLSCNHMIRKLFEIAASDEESFELDIWP  196 (484)
Q Consensus       120 -~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~R~~~~~~f~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~  196 (484)
                       .|.++.......++|. +++..+|+.|+++|+++.+.|++..++. +.+.+.+.++++++.|.       .++++|+.+
T Consensus        94 ~~~~~~~~~~~~~~lg~~~~~~~~g~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~  166 (463)
T PLN02774         94 KGLVPGYPQSMLDILGTCNIAAVHGSTHRYMRGSLLSLISPTMIRDHLLPKIDEFMRSHLSGWD-------GLKTIDIQE  166 (463)
T ss_pred             CeEEecCCHHHHHHhCccchhhcCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhC-------CCCCEEeeH
Confidence             5544332233345554 5777899999999999999999998875 78888888888888774       234689999


Q ss_pred             HHHHHHHHHHHHHHhCCCccchhHHHHHHHHHHHHHH-hhhcccccchh--H-------------HHHHH---hccCCch
Q 046539          197 HIQALAADVISRTAFGSNYDDGRKIFELIREQSHLFI-EVSQFDYIPGW--R-------------EEALR---IGKASND  257 (484)
Q Consensus       197 ~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~--~-------------~~~~~---~~~~~~~  257 (484)
                      .+..+++++++.++||.......+  .....+..... ......++|..  .             .+.++   ......+
T Consensus       167 ~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~  244 (463)
T PLN02774        167 KTKEMALLSALKQIAGTLSKPISE--EFKTEFFKLVLGTLSLPIDLPGTNYRSGVQARKNIVRMLRQLIQERRASGETHT  244 (463)
T ss_pred             HHHHHHHHHHHHHHcCCCChHHHH--HHHHHHHHHhcccccCCcCCCChhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence            999999999999999976432211  11112211111 11111234432  1             11111   1112346


Q ss_pred             hHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCC----CCCC
Q 046539          258 DLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGN----KEPK  333 (484)
Q Consensus       258 ~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~----~~~~  333 (484)
                      |+++.+++...+     +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++.    ..++
T Consensus       245 d~l~~ll~~~~~-----~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~  319 (463)
T PLN02774        245 DMLGYLMRKEGN-----RYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPID  319 (463)
T ss_pred             cHHHHHHhCccC-----CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCC
Confidence            899988863221     2358999999999999999999999999999999999999999999999999862    4578


Q ss_pred             hhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchh
Q 046539          334 FDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSK  413 (484)
Q Consensus       334 ~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~  413 (484)
                      +++++++||++|||+|+||++|+++.+.|++.+|++++||.||||+.|+++.+++||||++| +||++|+||||++++..
T Consensus       320 ~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~-~dP~~F~PeRfl~~~~~  398 (463)
T PLN02774        320 WNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLY-PDPMTFNPWRWLDKSLE  398 (463)
T ss_pred             HHHHhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeECCEEECCCCEEEEehHHhcCCcccC-CChhccCchhcCCCCcC
Confidence            99999999999999999999999998889999999999999999999999999999999999 99999999999975321


Q ss_pred             hhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCCCCcceeccCCCcceeeec
Q 046539          414 AAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAPSSGITVYPQHGAHMILNK  483 (484)
Q Consensus       414 ~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  483 (484)
                        . . ..++|||+|+|.|+|+++|++|++++++.|+++|+|++.++....+.  .+..|+++++|+++|
T Consensus       399 --~-~-~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~~~--~~~~p~~g~~~~~~~  462 (463)
T PLN02774        399 --S-H-NYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLMKF--PRVEAPNGLHIRVSP  462 (463)
T ss_pred             --C-C-ccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCccccC--CCCCCCCCceEEeee
Confidence              1 2 46999999999999999999999999999999999999776433222  345689999999976


No 19 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.7e-70  Score=540.68  Aligned_cols=424  Identities=19%  Similarity=0.267  Sum_probs=324.6

Q ss_pred             HhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceE---EeeCCcCeEEeCCHHHHHH
Q 046539           37 RQQGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSF---KWMGPRPSINVQDPKLIRE  113 (484)
Q Consensus        37 ~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~---~~~~~~~~vvv~dp~~i~~  113 (484)
                      |++++|||+++|++||+..+....               ...+.++.+...+||..+.   .++|+.++++++||+++++
T Consensus        29 ~~~~~p~p~~~pl~G~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~   93 (500)
T PLN02169         29 KPHGQPILKNWPFLGMLPGMLHQI---------------PRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHH   93 (500)
T ss_pred             ccCCCCCCCCCCcccchHHHHHcc---------------CcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHH
Confidence            345899999999999998775410               0123355555556886655   5789999999999999999


Q ss_pred             HHhhCC-cccCCCCCc-cccccccceeecCCcchhHHHhhhccCCChHHHhh--hHHHHHHHHHHHHHHHHHHHhcCCCC
Q 046539          114 ILLKHD-IFQKPKGNS-LGKLVVNGMVTYEGEQWSKVRKIANPAFHQDKLKD--MLPKMYLSCNHMIRKLFEIAASDEES  189 (484)
Q Consensus       114 vl~~~~-~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~R~~~~~~f~~~~l~~--~~~~i~~~~~~l~~~l~~~~~~~~~~  189 (484)
                      ||.++. .|+++.... ...++|+|+++++|+.|+++|+++++.|+..+++.  +.+.+.+.++.+++.+.+...   ++
T Consensus        94 il~~~~~~~~k~~~~~~~~~~~g~gl~~~~g~~Wr~~Rk~l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~  170 (500)
T PLN02169         94 ILSSNFGNYPKGPEFKKIFDVLGEGILTVDFELWEDLRKSNHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAH---EN  170 (500)
T ss_pred             HHhhCcccCCCcHHHHHHHHhhcCcccccCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cC
Confidence            998765 677765332 44567899999999999999999999999887764  346677788888888875433   34


Q ss_pred             cccchHHHHHHHHHHHHHHHHhCCCccch------hHHHHHHHHHHHHHHh-hh-c------ccccc--hhH--------
Q 046539          190 FELDIWPHIQALAADVISRTAFGSNYDDG------RKIFELIREQSHLFIE-VS-Q------FDYIP--GWR--------  245 (484)
Q Consensus       190 ~~vdl~~~~~~~~~~~i~~~~fG~~~~~~------~~~~~~~~~~~~~~~~-~~-~------~~~~p--~~~--------  245 (484)
                      ..+|+.+.+..+++|+++.++||.+.+..      .++............. .. .      ..+++  ..+        
T Consensus       171 ~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  250 (500)
T PLN02169        171 IIIDLQDVFMRFMFDTSSILMTGYDPMSLSIEMLEVEFGEAADIGEEAIYYRHFKPVILWRLQNWIGIGLERKMRTALAT  250 (500)
T ss_pred             CeEeHHHHHHHHHHHHHHhheeCCCccccCCCCCCCHHHHHHHHHHHHHHhHHhccHHHHHHHHHhCCchhhHHHHHHHH
Confidence            57999999999999999999999865321      1222222222111100 00 0      00111  111        


Q ss_pred             ---------HHHHHh-c-c----CCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHh
Q 046539          246 ---------EEALRI-G-K----ASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLC  310 (484)
Q Consensus       246 ---------~~~~~~-~-~----~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~  310 (484)
                               .++.+. . .    ...+|+++.+++....+ .+.+..++++++.+++.++++||+|||+++++|++++|+
T Consensus       251 ~~~~~~~~I~~r~~~~~~~~~~~~~~~d~l~~ll~~~~~~-~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La  329 (500)
T PLN02169        251 VNRMFAKIISSRRKEEISRAETEPYSKDALTYYMNVDTSK-YKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLS  329 (500)
T ss_pred             HHHHHHHHHHHHHHHhhccccccCCCcCHHHHHHhccccc-cccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHH
Confidence                     111111 0 0    11368888888653211 001124788999999999999999999999999999999


Q ss_pred             cChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCccccccccccccee-cCEEeCCCCeEEechhhhh
Q 046539          311 MHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKL-GDFILPPGVLLSLPIILVH  389 (484)
Q Consensus       311 ~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i-~g~~Ip~G~~v~~~~~~~~  389 (484)
                      +||++|+|+++||+++     ++.+++++|||++|||+||||++|++|.+.|.+.+|.++ +||.|||||.|.+++|++|
T Consensus       330 ~~Pevq~kl~~Ei~~v-----~~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ih  404 (500)
T PLN02169        330 KHPQVMAKIRHEINTK-----FDNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALG  404 (500)
T ss_pred             CCHHHHHHHHHHHHhh-----CCHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhh
Confidence            9999999999999987     367899999999999999999999999988888777665 9999999999999999999


Q ss_pred             cCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCCCCcc
Q 046539          390 HDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAPSSGI  469 (484)
Q Consensus       390 ~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~  469 (484)
                      |||++||+||++|+||||+++++.....+..+|+|||+|+|+|+|++||++|+++++++|+++|+|+++++.......+.
T Consensus       405 rd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~~~~~~~  484 (500)
T PLN02169        405 RMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKIEAIPSI  484 (500)
T ss_pred             CCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCcccccce
Confidence            99999988999999999997533221112378999999999999999999999999999999999998766444445567


Q ss_pred             eeccCCCcceeeecC
Q 046539          470 TVYPQHGAHMILNKL  484 (484)
Q Consensus       470 ~~~~~~~~~v~~~~~  484 (484)
                      +++|+++++|+++||
T Consensus       485 ~l~~~~gl~l~l~~~  499 (500)
T PLN02169        485 LLRMKHGLKVTVTKK  499 (500)
T ss_pred             EEecCCCEEEEEEeC
Confidence            889999999999987


No 20 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=1.7e-69  Score=530.52  Aligned_cols=401  Identities=19%  Similarity=0.342  Sum_probs=322.8

Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhC
Q 046539           39 QGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKH  118 (484)
Q Consensus        39 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~  118 (484)
                      ..||||+++|++||+.++..                 ++++.++.+++++||++|++++++.++|+++||+++++++.++
T Consensus        35 ~~Ppgp~~~P~iG~~~~~~~-----------------~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~   97 (463)
T PLN02196         35 PLPPGTMGWPYVGETFQLYS-----------------QDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTK   97 (463)
T ss_pred             CCCCCCCCCCccchHHHHHh-----------------cCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCC
Confidence            36777878999999987643                 2567789999999999999999999999999999999999876


Q ss_pred             C-cccCCCCCc-ccccccc-ceeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchH
Q 046539          119 D-IFQKPKGNS-LGKLVVN-GMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIW  195 (484)
Q Consensus       119 ~-~~~~~~~~~-~~~~~g~-~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~  195 (484)
                      . .| ++.... ....+|. ++++.+|+.|+++|+++.+.|++++++.+.+.+.+.++++++.|.        +..+|+.
T Consensus        98 ~~~~-~~~~~~~~~~~~g~~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~i~~~~~~~~~~~~--------~~~v~~~  168 (463)
T PLN02196         98 SHLF-KPTFPASKERMLGKQAIFFHQGDYHAKLRKLVLRAFMPDAIRNMVPDIESIAQESLNSWE--------GTQINTY  168 (463)
T ss_pred             CCcc-cccCchHHHHHcCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHcCC--------CCeEEeH
Confidence            5 45 322222 2334554 678889999999999999999999999999999999999998874        2368999


Q ss_pred             HHHHHHHHHHHHHHHhCCCccch-hHHHHHHHHHHHHHHhhhcccccchh--H-------------HHHHHh---ccCCc
Q 046539          196 PHIQALAADVISRTAFGSNYDDG-RKIFELIREQSHLFIEVSQFDYIPGW--R-------------EEALRI---GKASN  256 (484)
Q Consensus       196 ~~~~~~~~~~i~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~--~-------------~~~~~~---~~~~~  256 (484)
                      ++++.+++++++.++||.+.... .++.............  ....+|..  .             .+.+..   .....
T Consensus       169 ~~~~~~~~~v~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~~~~  246 (463)
T PLN02196        169 QEMKTYTFNVALLSIFGKDEVLYREDLKRCYYILEKGYNS--MPINLPGTLFHKSMKARKELAQILAKILSKRRQNGSSH  246 (463)
T ss_pred             HHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhcchhc--ccccCCCccchHHHHHHHHHHHHHHHHHHHHhhcCCCc
Confidence            99999999999999999875322 2222211111111000  11122321  1             111111   11134


Q ss_pred             hhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhC----CCCC
Q 046539          257 DDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLG----NKEP  332 (484)
Q Consensus       257 ~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~----~~~~  332 (484)
                      .|+++.+++.        ..+++++++.++++++++||+|||+++++|++++|++||++|+++++|++++.+    ++.+
T Consensus       247 ~d~l~~ll~~--------~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~  318 (463)
T PLN02196        247 NDLLGSFMGD--------KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESL  318 (463)
T ss_pred             ccHHHHHHhc--------CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCC
Confidence            5777777642        135899999999999999999999999999999999999999999999999886    2457


Q ss_pred             ChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcch
Q 046539          333 KFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVS  412 (484)
Q Consensus       333 ~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~  412 (484)
                      ++++++++||++|||+|+||++|+++...|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||++.. 
T Consensus       319 ~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~-~dP~~F~PeRfl~~~-  396 (463)
T PLN02196        319 TWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIF-SDPGKFDPSRFEVAP-  396 (463)
T ss_pred             CHHHHhcChHHHHHHHHHHhcCCCccccceeeccccccCCEEeCCCCEEEeeHHHhcCCchhc-CCcCccChhhhcCCC-
Confidence            899999999999999999999999999889999999999999999999999999999999999 999999999999631 


Q ss_pred             hhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCCCCcceeccCCCcceeeec
Q 046539          413 KAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAPSSGITVYPQHGAHMILNK  483 (484)
Q Consensus       413 ~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  483 (484)
                          .+ ..++|||.|+|.|+|+++|++|++++++.|+++|+|++.+++.. .....+..|+++++|+++.
T Consensus       397 ----~~-~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~  461 (463)
T PLN02196        397 ----KP-NTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTSNG-IQYGPFALPQNGLPIALSR  461 (463)
T ss_pred             ----CC-CcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCCCc-eEEcccccCCCCceEEEec
Confidence                22 68999999999999999999999999999999999998876432 2334456799999999875


No 21 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=2.2e-69  Score=530.59  Aligned_cols=415  Identities=18%  Similarity=0.247  Sum_probs=328.6

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCC-
Q 046539           41 FSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHD-  119 (484)
Q Consensus        41 ~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~-  119 (484)
                      ||||+++|++||++++..                 .+++.++.+|+++||++|++++|+.++|+|+||+++++++.++. 
T Consensus         1 ppgp~~lP~iG~l~~~~~-----------------~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~   63 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKE-----------------KKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFS   63 (466)
T ss_pred             CcCCCCCCccccHHHcCC-----------------CchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCc
Confidence            589999999999988742                 14677999999999999999999999999999999999998766 


Q ss_pred             cccCCCCCc-cccccccc--eeec-CCcchhHHHhhhc-cCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccch
Q 046539          120 IFQKPKGNS-LGKLVVNG--MVTY-EGEQWSKVRKIAN-PAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDI  194 (484)
Q Consensus       120 ~~~~~~~~~-~~~~~g~~--~~~~-~~~~~~~~R~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl  194 (484)
                      .|+.++... ...+.+++  +++. +|+.|+++|+.+. +.|+...++.+.+.+.+.++.+++.+.+...++ .++.+|+
T Consensus        64 ~f~~r~~~~~~~~~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~vd~  142 (466)
T PLN02655         64 SISTRKLSKALTVLTRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDD-PHSPVNF  142 (466)
T ss_pred             hhcCCChhhHHHHHhcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhcccc-CCCceeH
Confidence            676655333 33344433  4454 4899999998665 557777788899999999999999987654432 3457999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCccchh--H----------HHHHHHHHHHHHHhhhccccc------chh--H---------
Q 046539          195 WPHIQALAADVISRTAFGSNYDDGR--K----------IFELIREQSHLFIEVSQFDYI------PGW--R---------  245 (484)
Q Consensus       195 ~~~~~~~~~~~i~~~~fG~~~~~~~--~----------~~~~~~~~~~~~~~~~~~~~~------p~~--~---------  245 (484)
                      .+++..+++|+++.++||.+.+...  +          +.....++...........++      |..  .         
T Consensus       143 ~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~  222 (466)
T PLN02655        143 RDVFENELFGLSLIQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFR  222 (466)
T ss_pred             HHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHH
Confidence            9999999999999999998754311  1          111112221111111111122      211  0         


Q ss_pred             ---------HHHHHh--ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChH
Q 046539          246 ---------EEALRI--GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPI  314 (484)
Q Consensus       246 ---------~~~~~~--~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~  314 (484)
                               .+..+.  ......|+++.+++..        ..++++++.+++.++++||+|||+++++|++++|++||+
T Consensus       223 ~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~--------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~  294 (466)
T PLN02655        223 RTAVMKALIKQQKKRIARGEERDCYLDFLLSEA--------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPD  294 (466)
T ss_pred             HHHHHHHHHHHHHHhhcCCCCcccHHHHHHhcc--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH
Confidence                     000111  1112357888887653        248999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCccc-ccccccccceecCEEeCCCCeEEechhhhhcCCC
Q 046539          315 WQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYL-IFRTNVEETKLGDFILPPGVLLSLPIILVHHDHE  393 (484)
Q Consensus       315 ~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~  393 (484)
                      +|+++++||+++.++..+++++++++||++|||+||||++|+++. .+|++.+|++++||.|||||.|+++.+++||||+
T Consensus       295 ~~~~l~~Ei~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~  374 (466)
T PLN02655        295 KQERLYREIREVCGDERVTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKK  374 (466)
T ss_pred             HHHHHHHHHHHHhCCCCCCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcc
Confidence            999999999999986669999999999999999999999999998 4799999999999999999999999999999999


Q ss_pred             CccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcc-cCCCCcceec
Q 046539          394 YWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYV-HAPSSGITVY  472 (484)
Q Consensus       394 ~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~  472 (484)
                      +| +||++|+||||++..... ... ..++|||.|+|.|+|++||+.|+++++++|+++|+|++.++.. .....++++.
T Consensus       375 ~~-~~p~~F~PeR~~~~~~~~-~~~-~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  451 (466)
T PLN02655        375 RW-ENPEEWDPERFLGEKYES-ADM-YKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEEKEDTVQLTTQ  451 (466)
T ss_pred             cC-CChhccCccccCCCCccc-CCc-ccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCccccchhheeEe
Confidence            99 999999999999753221 122 6899999999999999999999999999999999999976532 2334567788


Q ss_pred             cCCCcceeeecC
Q 046539          473 PQHGAHMILNKL  484 (484)
Q Consensus       473 ~~~~~~v~~~~~  484 (484)
                      +++++.|++++|
T Consensus       452 ~~~~~~~~~~~r  463 (466)
T PLN02655        452 KLHPLHAHLKPR  463 (466)
T ss_pred             ecCCcEEEEeec
Confidence            999999999887


No 22 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=6.8e-69  Score=494.31  Aligned_cols=418  Identities=20%  Similarity=0.319  Sum_probs=339.6

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEe-eCCcCeEEeCCHHHHHHHHhhC
Q 046539           40 GFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKW-MGPRPSINVQDPKLIREILLKH  118 (484)
Q Consensus        40 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~-~~~~~~vvv~dp~~i~~vl~~~  118 (484)
                      .||||+++|++|.+..+...              ...+.++.....+++|||||+.. +|+...|.+.+|++++.+++++
T Consensus        51 ~IP~p~~~~~l~~l~~~~~~--------------~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~E  116 (519)
T KOG0159|consen   51 EIPGPKGLPFLGLLWIWRAG--------------GATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNE  116 (519)
T ss_pred             hcCCCCCccHHHHHHHHHhh--------------hhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcC
Confidence            68999999999988874321              12366788999999999999999 7888999999999999999998


Q ss_pred             CcccCCC-CCc----cccccc--cceeecCCcchhHHHhhhccC-CChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 046539          119 DIFQKPK-GNS----LGKLVV--NGMVTYEGEQWSKVRKIANPA-FHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESF  190 (484)
Q Consensus       119 ~~~~~~~-~~~----~~~~~g--~~~~~~~~~~~~~~R~~~~~~-f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~  190 (484)
                      +.+..++ .+.    -.++++  .|++..+|+.|.+.|..+++. +.+++++.|.+.++..+++++..+++..+.+.+..
T Consensus       117 G~~P~Rp~~~~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~  196 (519)
T KOG0159|consen  117 GKYPFRPLLIEPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGEL  196 (519)
T ss_pred             CCCCCcccccchhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhccccccc
Confidence            8666664 221    233443  479999999999999999977 67899999999999999999999999877533566


Q ss_pred             ccchHHHHHHHHHHHHHHHHhCCCccch--------hHHHHHHHHHHHHHHhhh----ccccc--chhH-----------
Q 046539          191 ELDIWPHIQALAADVISRTAFGSNYDDG--------RKIFELIREQSHLFIEVS----QFDYI--PGWR-----------  245 (484)
Q Consensus       191 ~vdl~~~~~~~~~~~i~~~~fG~~~~~~--------~~~~~~~~~~~~~~~~~~----~~~~~--p~~~-----------  245 (484)
                      ..|+.+.+.+++++.||.++||.+.+..        +.+.+.+..+........    ...++  |.|.           
T Consensus       197 ~~D~~~~l~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p~l~r~~~t~~wk~~~~~~D~i~~  276 (519)
T KOG0159|consen  197 VPDFAQELYRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMPSLWRYFPTKVWKDFVRAWDQIFD  276 (519)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcchHHHhCCChHHHHHHHHHHHHHH
Confidence            7899999999999999999999976531        233444444333222211    11111  2222           


Q ss_pred             ------HHHHH---hccC---C-chhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcC
Q 046539          246 ------EEALR---IGKA---S-NDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMH  312 (484)
Q Consensus       246 ------~~~~~---~~~~---~-~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~  312 (484)
                            ....+   ....   . ...++..+..          +.++.+++..+++++++||.|||+.++.|+||+|++|
T Consensus       277 ~~~~~Id~~l~~l~~~~~~~~~~~~~l~~~L~~----------~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~Larn  346 (519)
T KOG0159|consen  277 VGDKYIDNALEELEKQDSAGSEYTGSLLELLLR----------KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARN  346 (519)
T ss_pred             HHHHHHHHHHHHHHhccccccchhHHHHHHHHH----------ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcC
Confidence                  01111   1110   1 1112222221          2478999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHhC--CCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCCeEEechhhhhc
Q 046539          313 PIWQERARQEVFQVLG--NKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLSLPIILVHH  390 (484)
Q Consensus       313 p~~~~~l~~Ei~~~~~--~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~  390 (484)
                      |++|+++++|+.++..  +..++.+++.++|||.||||||+||||.+|+..|...+|.+++||.|||||.|.++.+.+.+
T Consensus       347 P~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r  426 (519)
T KOG0159|consen  347 PEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGR  426 (519)
T ss_pred             hHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhhcc
Confidence            9999999999999987  36788999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCCCCcce
Q 046539          391 DHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAPSSGIT  470 (484)
Q Consensus       391 d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~  470 (484)
                      ||++| ++|.+|+||||++++. ...++ ..++|||.|+|+|+|+.+|++|+-+++++|+++|+++..+..+.+....++
T Consensus       427 ~~~~F-~~p~~F~PeRWL~~~~-~~~~p-F~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~pv~~~~~~i  503 (519)
T KOG0159|consen  427 NPAYF-PDPEEFLPERWLKPST-KTIHP-FASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEPVEYVYRFI  503 (519)
T ss_pred             ChhhC-CCccccChhhhccccc-CCCCC-ceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCCccceeEEE
Confidence            99999 9999999999999863 22445 899999999999999999999999999999999999988765666677888


Q ss_pred             eccCCCcceeeecC
Q 046539          471 VYPQHGAHMILNKL  484 (484)
Q Consensus       471 ~~~~~~~~v~~~~~  484 (484)
                      ..|..++...|++|
T Consensus       504 l~P~~~l~f~f~~r  517 (519)
T KOG0159|consen  504 LVPNRPLRFKFRPR  517 (519)
T ss_pred             EcCCCCcceeeeeC
Confidence            99999999999886


No 23 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=1.2e-68  Score=523.96  Aligned_cols=408  Identities=18%  Similarity=0.250  Sum_probs=322.9

Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhC
Q 046539           39 QGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKH  118 (484)
Q Consensus        39 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~  118 (484)
                      +.||||+++|++||++.+...             .+..+++.++.++.++||+||++++|+.++||++||+++++++.++
T Consensus         7 ~~Ppg~~~~P~iG~~~~l~~~-------------~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~   73 (452)
T PLN03141          7 RLPKGSLGWPVIGETLDFISC-------------AYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSD   73 (452)
T ss_pred             CCCCCCCCCCchhhHHHHHhh-------------cccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCC
Confidence            357899999999999987531             0112467799999999999999999999999999999999999877


Q ss_pred             C-cccCCCCCcccccccc-ceeecCCcchhHHHhhhccCCChHHHhh-hHHHHHHHHHHHHHHHHHHHhcCCCCcccchH
Q 046539          119 D-IFQKPKGNSLGKLVVN-GMVTYEGEQWSKVRKIANPAFHQDKLKD-MLPKMYLSCNHMIRKLFEIAASDEESFELDIW  195 (484)
Q Consensus       119 ~-~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~R~~~~~~f~~~~l~~-~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~  195 (484)
                      + .|+.........++|. +++..+|+.|+++|+++.+.|+..++.. +.+.+.+.++++++.|.       .+..+|+.
T Consensus        74 ~~~~~~~~~~~~~~l~g~~~~~~~~g~~wr~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~  146 (452)
T PLN03141         74 GNAFVPAYPKSLTELMGKSSILLINGSLQRRVHGLIGAFLKSPHLKAQITRDMERYVSESLDSWR-------DDPPVLVQ  146 (452)
T ss_pred             CCeeeccCchhHHHHhCcccccccCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhcc-------CCCCEEhH
Confidence            6 5554322223445665 5788899999999999999998777755 35566666666665553       23468999


Q ss_pred             HHHHHHHHHHHHHHHhCCCccch-hHHHHHHHHHHHHHHhhhcccccchhH-------------------HHHHHhccC-
Q 046539          196 PHIQALAADVISRTAFGSNYDDG-RKIFELIREQSHLFIEVSQFDYIPGWR-------------------EEALRIGKA-  254 (484)
Q Consensus       196 ~~~~~~~~~~i~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~-------------------~~~~~~~~~-  254 (484)
                      +.+..+++++++.++||.+.... +++.....++......  ...++|.+.                   ++..+..+. 
T Consensus       147 ~~~~~~~~~vi~~~~~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  224 (452)
T PLN03141        147 DETKKIAFEVLVKALISLEPGEEMEFLKKEFQEFIKGLMS--LPIKLPGTRLYRSLQAKKRMVKLVKKIIEEKRRAMKNK  224 (452)
T ss_pred             HHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHhhhHHh--CccCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999865332 2222222322221111  112334321                   011111100 


Q ss_pred             ------CchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhC
Q 046539          255 ------SNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLG  328 (484)
Q Consensus       255 ------~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~  328 (484)
                            ...|+++.++++.       +..+++++++.+++.+++||+|||+++++|++++|++||++|+++++|++++.+
T Consensus       225 ~~~~~~~~~d~l~~ll~~~-------~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~  297 (452)
T PLN03141        225 EEDETGIPKDVVDVLLRDG-------SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKR  297 (452)
T ss_pred             CccccCChhhHHHHHHhcC-------CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHh
Confidence                  1357888887653       235899999999999999999999999999999999999999999999998753


Q ss_pred             -----CCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCC
Q 046539          329 -----NKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFN  403 (484)
Q Consensus       329 -----~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~  403 (484)
                           ++.++.+++.++||++|||+|++|++|+++.++|.+.+|++++||.||||+.|+++.+++|||+++| +||++|+
T Consensus       298 ~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~-~dP~~F~  376 (452)
T PLN03141        298 LKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENY-DNPYQFN  376 (452)
T ss_pred             ccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCchhc-CCccccC
Confidence                 3457899999999999999999999999988899999999999999999999999999999999999 9999999


Q ss_pred             CCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCCCCcceeccCCCcceeeec
Q 046539          404 PDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAPSSGITVYPQHGAHMILNK  483 (484)
Q Consensus       404 P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  483 (484)
                      ||||++++.    .+ ..|+|||+|+|.|+|++||++|++++++.|+++|+|++.++...   ...++.|+++++|+++|
T Consensus       377 PeRfl~~~~----~~-~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~---~~~~~~~~~~~~~~~~~  448 (452)
T PLN03141        377 PWRWQEKDM----NN-SSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTIV---NFPTVRMKRKLPIWVTR  448 (452)
T ss_pred             cccccCCCC----CC-CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCee---ecccccCCCCceEEEEe
Confidence            999997522    13 68999999999999999999999999999999999998765321   23478999999999998


Q ss_pred             C
Q 046539          484 L  484 (484)
Q Consensus       484 ~  484 (484)
                      |
T Consensus       449 ~  449 (452)
T PLN03141        449 I  449 (452)
T ss_pred             C
Confidence            7


No 24 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=8.6e-68  Score=525.48  Aligned_cols=413  Identities=19%  Similarity=0.308  Sum_probs=327.8

Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCC--ceEEeeCCcCeEEeCCHHHHHHHHh
Q 046539           39 QGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGK--KSFKWMGPRPSINVQDPKLIREILL  116 (484)
Q Consensus        39 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~--vf~~~~~~~~~vvv~dp~~i~~vl~  116 (484)
                      +.+|||+++|++|+++++.....             .++++.++.+++++||+  +|++++++.++|+++||+++++++.
T Consensus        42 ~lpPgp~~~PilG~l~~~~~~~~-------------~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~  108 (490)
T PLN02302         42 PLPPGDLGWPVIGNMWSFLRAFK-------------SSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLT  108 (490)
T ss_pred             CCcCCCCCCCccccHHHHHHhcc-------------cCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHc
Confidence            45799999999999998764211             13567789999999997  7899999999999999999999998


Q ss_pred             hCCcccCCCCCccccccccc-eeecCCcchhHHHhhhccCCC-hHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccch
Q 046539          117 KHDIFQKPKGNSLGKLVVNG-MVTYEGEQWSKVRKIANPAFH-QDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDI  194 (484)
Q Consensus       117 ~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~R~~~~~~f~-~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl  194 (484)
                      +++.|.+.........+|.+ ++..+|+.|+++|+++.+.|+ +++++.+.+.+.+.++++++.|..       ++.+|+
T Consensus       109 ~~~~f~~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~-------~~~v~~  181 (490)
T PLN02302        109 DDDAFEPGWPESTVELIGRKSFVGITGEEHKRLRRLTAAPVNGPEALSTYIPYIEENVKSCLEKWSK-------MGEIEF  181 (490)
T ss_pred             CCCccccCCchhHHHHhccccccccCcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHhcC-------CCCEeh
Confidence            76656554332222345544 566789999999999999995 778999999999999999998852       236999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCccch-hHHHHHHHHHHHHHHhhhcccccchhH-------------------HHHHHhcc-
Q 046539          195 WPHIQALAADVISRTAFGSNYDDG-RKIFELIREQSHLFIEVSQFDYIPGWR-------------------EEALRIGK-  253 (484)
Q Consensus       195 ~~~~~~~~~~~i~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~-------------------~~~~~~~~-  253 (484)
                      .++++.+++++++.++||.+.... +++..........+..  ....+|...                   .+..+... 
T Consensus       182 ~~~~~~~~~~vi~~~~~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~  259 (490)
T PLN02302        182 LTELRKLTFKIIMYIFLSSESELVMEALEREYTTLNYGVRA--MAINLPGFAYHRALKARKKLVALFQSIVDERRNSRKQ  259 (490)
T ss_pred             HHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHhhh--CCcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            999999999999999999876432 1221211111111111  011223211                   11111110 


Q ss_pred             ---CCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCC
Q 046539          254 ---ASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNK  330 (484)
Q Consensus       254 ---~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~  330 (484)
                         ....|+++.+++...++    +..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++.++.
T Consensus       260 ~~~~~~~d~l~~ll~~~~~~----~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~  335 (490)
T PLN02302        260 NISPRKKDMLDLLLDAEDEN----GRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKR  335 (490)
T ss_pred             cCCCCcCCHHHHHHhhhccC----CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC
Confidence               13568999998764321    33589999999999999999999999999999999999999999999999998632


Q ss_pred             -----CCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCC
Q 046539          331 -----EPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPD  405 (484)
Q Consensus       331 -----~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~  405 (484)
                           .+++++++++||++|||+|++|++|+++..+|.+.+|++++||.||||+.|.++.+++||||++| +||++|+||
T Consensus       336 ~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~-~dP~~F~Pe  414 (490)
T PLN02302        336 PPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVY-PNPKEFDPS  414 (490)
T ss_pred             CCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccC-CCccccChh
Confidence                 26899999999999999999999999999889999999999999999999999999999999999 999999999


Q ss_pred             CCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCCCCcceeccCCCcceeeecC
Q 046539          406 RFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       406 R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      ||++..    . ....++|||.|+|.|+|++||.+|++++++.|+++|+|++.++.. ......++.|.+++++++++|
T Consensus       415 R~~~~~----~-~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~  487 (490)
T PLN02302        415 RWDNYT----P-KAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPGC-KVMYLPHPRPKDNCLARITKV  487 (490)
T ss_pred             hcCCCC----C-CCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCCC-cceeCCCCCCCCCceEEEEec
Confidence            999752    1 226899999999999999999999999999999999999875421 112223478999999999886


No 25 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=4.3e-67  Score=518.25  Aligned_cols=420  Identities=18%  Similarity=0.273  Sum_probs=317.7

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccc-cchHHHHHHHh-CCceEEeeCCcCeEEeCCHHHHHHHHhh
Q 046539           40 GFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRI-LPYHHHIISKY-GKKSFKWMGPRPSINVQDPKLIREILLK  117 (484)
Q Consensus        40 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~y-G~vf~~~~~~~~~vvv~dp~~i~~vl~~  117 (484)
                      .||||+++|++||++++...                 ++ ..+++++.++| |+||++++|+.++|+|+||+++++++.+
T Consensus        41 ~PPgp~~~P~iGnl~~l~~~-----------------~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~  103 (534)
T PLN03018         41 LPPGPPGWPILGNLPELIMT-----------------RPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRE  103 (534)
T ss_pred             CCcCCCCCCeeccHHHhccC-----------------CCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHh
Confidence            58999999999999887420                 11 12466667776 7999999999999999999999999987


Q ss_pred             CC-cccCCCCCcccccccc---ceeec-CCcchhHHHhhhccCCChHH-HhhhHHHHHHHHHHHHHHHHHHHhcCCCCcc
Q 046539          118 HD-IFQKPKGNSLGKLVVN---GMVTY-EGEQWSKVRKIANPAFHQDK-LKDMLPKMYLSCNHMIRKLFEIAASDEESFE  191 (484)
Q Consensus       118 ~~-~~~~~~~~~~~~~~g~---~~~~~-~~~~~~~~R~~~~~~f~~~~-l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~  191 (484)
                      ++ .|+.++.......++.   ++++. +|+.|+++|+++++.|.... .+.+.+.+..+++++++.+.+...   .+.+
T Consensus       104 ~~~~f~~rp~~~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~  180 (534)
T PLN03018        104 RDADLADRPQLSIMETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQ---RSET  180 (534)
T ss_pred             CcHhhcCCCCchhhhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCCc
Confidence            66 6877765443333443   36655 59999999999999875444 455556666788999999886432   2346


Q ss_pred             cchHHHHHHHHHHHHHHHHhCCCccc-------hhHHHH----HHHHHHHHHHhh---hccc----ccc-----hhH---
Q 046539          192 LDIWPHIQALAADVISRTAFGSNYDD-------GRKIFE----LIREQSHLFIEV---SQFD----YIP-----GWR---  245 (484)
Q Consensus       192 vdl~~~~~~~~~~~i~~~~fG~~~~~-------~~~~~~----~~~~~~~~~~~~---~~~~----~~p-----~~~---  245 (484)
                      +|+.+.+..+++|++++++||.++..       ..+...    ............   ...+    +++     ...   
T Consensus       181 vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  260 (534)
T PLN03018        181 VDVRELSRVYGYAVTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERA  260 (534)
T ss_pred             eeHHHHHHHHHHHHHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHH
Confidence            99999999999999999999987532       111111    111111111100   0001    111     100   


Q ss_pred             ---------------HHHHHh---c-c-CCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHH
Q 046539          246 ---------------EEALRI---G-K-ASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWV  305 (484)
Q Consensus       246 ---------------~~~~~~---~-~-~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~  305 (484)
                                     ++..+.   . . ....|+++.+++...++   ....++++++++++.++++||+|||+++++|+
T Consensus       261 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~---~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~  337 (534)
T PLN03018        261 KVNVNLVRSYNNPIIDERVELWREKGGKAAVEDWLDTFITLKDQN---GKYLVTPDEIKAQCVEFCIAAIDNPANNMEWT  337 (534)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhccCCCCcccHHHHHHHhhccc---CCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence                           011110   1 1 12358999888754321   11138999999999999999999999999999


Q ss_pred             HHHHhcChHHHHHHHHHHHHHhC-CCCCChhhhccChhHHHHHHHhhcCCCCcccc-cccccccceecCEEeCCCCeEEe
Q 046539          306 LIMLCMHPIWQERARQEVFQVLG-NKEPKFDELNRLKMVGKIIYEVFRIYSPAYLI-FRTNVEETKLGDFILPPGVLLSL  383 (484)
Q Consensus       306 l~~L~~~p~~~~~l~~Ei~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~-~R~~~~d~~i~g~~Ip~G~~v~~  383 (484)
                      +++|+.||++|+++++||+++++ ++.++.+++++|||++|||+|+||++|+++.. +|.+.+|++++||.||||+.|.+
T Consensus       338 l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~  417 (534)
T PLN03018        338 LGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHV  417 (534)
T ss_pred             HHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEE
Confidence            99999999999999999999998 46688999999999999999999999999985 79999999999999999999999


Q ss_pred             chhhhhcCCCCccCCCCCCCCCCCCCcchhhh----cCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCC
Q 046539          384 PIILVHHDHEYWGDDAKAFNPDRFSEGVSKAA----KNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSP  459 (484)
Q Consensus       384 ~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~----~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~  459 (484)
                      +.+++||||++| +||++|+||||++.++...    ......++|||.|+|.|+|++||++|+++++++|+++|+|++.+
T Consensus       418 ~~~~~~~dp~~~-~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~  496 (534)
T PLN03018        418 CRPGLGRNPKIW-KDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQ  496 (534)
T ss_pred             ChHHhcCCcccC-CCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCC
Confidence            999999999999 9999999999997533210    11226799999999999999999999999999999999999876


Q ss_pred             Cc-ccCC--CCcceeccCCCcceeeecC
Q 046539          460 TY-VHAP--SSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       460 ~~-~~~~--~~~~~~~~~~~~~v~~~~~  484 (484)
                      +. ....  ..+ +...+++++|+++||
T Consensus       497 ~~~~~~~~~~~~-~~~~p~~~~v~~~~R  523 (534)
T PLN03018        497 DFGPLSLEEDDA-SLLMAKPLLLSVEPR  523 (534)
T ss_pred             CCCCCCcccccc-ceecCCCeEEEEEec
Confidence            53 2111  223 344457999999997


No 26 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=8.8e-69  Score=531.22  Aligned_cols=416  Identities=30%  Similarity=0.523  Sum_probs=333.2

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCC-
Q 046539           41 FSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHD-  119 (484)
Q Consensus        41 ~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~-  119 (484)
                      ||||+++|++||+..+.+                .++++.++.+++++||+||++++++++.++|+||+++++++.+++ 
T Consensus         1 Ppgp~~~p~~G~~~~~~~----------------~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~   64 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRR----------------KGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSK   64 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHT----------------THHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTT
T ss_pred             CcCCCCcCceeEHHHhcC----------------CCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccc
Confidence            699999999999999973                025677899999999999999999999999999999999999876 


Q ss_pred             cccCCCCCc-c----ccccccceeecCCcchhHHHhhhccCCChH-HHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 046539          120 IFQKPKGNS-L----GKLVVNGMVTYEGEQWSKVRKIANPAFHQD-KLKDMLPKMYLSCNHMIRKLFEIAASDEESFELD  193 (484)
Q Consensus       120 ~~~~~~~~~-~----~~~~g~~~~~~~~~~~~~~R~~~~~~f~~~-~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vd  193 (484)
                      .++..+... +    ....+.++++.+++.|+.+|+++.+.|+.. .+ ++.+.+.+.++.+++.|.+....   ...+|
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~---~~~vd  140 (463)
T PF00067_consen   65 YFSFRPRPPWFEIFRGPFGGKGLFFSDGERWRRQRRLLAPAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGS---SGPVD  140 (463)
T ss_dssp             TEEEEHCHHHHHHHHHHHTTTSSTTSSHHHHHHHHHHHHHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTS---ESEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccc---cceee
Confidence            555543222 2    245577888899999999999999999988 66 99999999999999999986432   23699


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCccc---h--hHHHHHHHHHHHHHHhhh--------cccccchhH---------------
Q 046539          194 IWPHIQALAADVISRTAFGSNYDD---G--RKIFELIREQSHLFIEVS--------QFDYIPGWR---------------  245 (484)
Q Consensus       194 l~~~~~~~~~~~i~~~~fG~~~~~---~--~~~~~~~~~~~~~~~~~~--------~~~~~p~~~---------------  245 (484)
                      +.++++.+++|+++.++||.+++.   .  .++.+....+...+....        ...++|...               
T Consensus       141 ~~~~~~~~~~d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  220 (463)
T PF00067_consen  141 LFDWLRRFALDVIGRVLFGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPTPLFRRFKRARDRLRKYI  220 (463)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHH
T ss_pred             eecccccccccccccccccceeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999999999999997652   1  123333444333221100        111222211               


Q ss_pred             ----HHHHHhcc---CCchhHHHHHHHhh-hHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHH
Q 046539          246 ----EEALRIGK---ASNDDLLGLLMESN-YKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQE  317 (484)
Q Consensus       246 ----~~~~~~~~---~~~~~~l~~ll~~~-~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~  317 (484)
                          ++..+...   ....|+++.+++.. ..+   .+.+++++++.+++..+++||+|||+.+++|++++|++||++|+
T Consensus       221 ~~~i~~~~~~~~~~~~~~~d~l~~ll~~~~~~~---~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~  297 (463)
T PF00067_consen  221 KEIIEERREELDDGDESRRDLLDSLLQASSDSD---GPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQE  297 (463)
T ss_dssp             HHHHHHHHHSHHSSSSSCSSHHHHHHHHHHTTT---TTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccccccc
Confidence                11111111   24678999999876 221   11379999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCC-CCCChhhhccChhHHHHHHHhhcCCCCcc-cccccccccceecCEEeCCCCeEEechhhhhcCCCCc
Q 046539          318 RARQEVFQVLGN-KEPKFDELNRLKMVGKIIYEVFRIYSPAY-LIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYW  395 (484)
Q Consensus       318 ~l~~Ei~~~~~~-~~~~~~~~~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~  395 (484)
                      ++++||+++.++ +.++.+++++||||+|||+||+|++|+++ .++|++.+|++++||.|||||.|.++.+++|+||++|
T Consensus       298 kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~  377 (463)
T PF00067_consen  298 KLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYF  377 (463)
T ss_dssp             HHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999873 46789999999999999999999999999 6899999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCCCCc--ceecc
Q 046539          396 GDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAPSSG--ITVYP  473 (484)
Q Consensus       396 g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~--~~~~~  473 (484)
                       +||++|+||||++....... ....++|||.|+|.|+|++||++|++++++.|+++|+|+++++....+...  ....|
T Consensus       378 -~dp~~F~P~R~~~~~~~~~~-~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  455 (463)
T PF00067_consen  378 -PDPDEFDPERFLDERGISNR-PSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLP  455 (463)
T ss_dssp             -SSTTS--TTGGBTTTSTBCS-SSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEE
T ss_pred             -cccccccccccccccccccc-ccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEee
Confidence             99999999999997551112 337899999999999999999999999999999999999976543332221  45677


Q ss_pred             CCCcceee
Q 046539          474 QHGAHMIL  481 (484)
Q Consensus       474 ~~~~~v~~  481 (484)
                      +.+++|.|
T Consensus       456 ~~~~~~~~  463 (463)
T PF00067_consen  456 PKPLKVKF  463 (463)
T ss_dssp             ESSSEEEE
T ss_pred             CCCcEEeC
Confidence            77888875


No 27 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=8.9e-67  Score=509.41  Aligned_cols=410  Identities=19%  Similarity=0.273  Sum_probs=314.0

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCC
Q 046539           40 GFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHD  119 (484)
Q Consensus        40 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~  119 (484)
                      .+|||.++|++||++++.....             ..+++.++.++.++||++|++++++.++|+++||+++++++.++.
T Consensus        31 lppgp~~~P~iG~~~~~~~~~~-------------~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~   97 (472)
T PLN02987         31 LPPGSLGLPLVGETLQLISAYK-------------TENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEG   97 (472)
T ss_pred             CcCCCcCCCchhhHHHHHhhcc-------------cCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCC
Confidence            5789999999999998753100             014667889999999999999999999999999999999998766


Q ss_pred             -cccCCCCCccccccc-cceeecCCcchhHHHhhhccCCChHHHhhhHH-HHHHHHHHHHHHHHHHHhcCCCCcccchHH
Q 046539          120 -IFQKPKGNSLGKLVV-NGMVTYEGEQWSKVRKIANPAFHQDKLKDMLP-KMYLSCNHMIRKLFEIAASDEESFELDIWP  196 (484)
Q Consensus       120 -~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~-~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~  196 (484)
                       .|+++.......++| .++++.+|+.|+++|+++...++.+.++.+.. .+.+.++..++.|.         ..+++.+
T Consensus        98 ~~f~~~~~~~~~~~lg~~~l~~~~g~~wr~~R~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~~~  168 (472)
T PLN02987         98 KLFECSYPGSISNLLGKHSLLLMKGNLHKKMHSLTMSFANSSIIKDHLLLDIDRLIRFNLDSWS---------SRVLLME  168 (472)
T ss_pred             ceEEecCcHHHHHHhCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhhc---------cceehHH
Confidence             676554333445556 47888899999999999876444444444321 12222333333331         2589999


Q ss_pred             HHHHHHHHHHHHHHhCCCccch-hHHHHHHHHHHHHHHhhhcccccchhH-----------------HHHHHh---ccCC
Q 046539          197 HIQALAADVISRTAFGSNYDDG-RKIFELIREQSHLFIEVSQFDYIPGWR-----------------EEALRI---GKAS  255 (484)
Q Consensus       197 ~~~~~~~~~i~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~-----------------~~~~~~---~~~~  255 (484)
                      .+..++++++++++||.+.+.. +.+...+......+.......+.+.++                 .+..+.   +...
T Consensus       169 ~~~~~t~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~  248 (472)
T PLN02987        169 EAKKITFELTVKQLMSFDPGEWTESLRKEYVLVIEGFFSVPLPLFSTTYRRAIQARTKVAEALTLVVMKRRKEEEEGAEK  248 (472)
T ss_pred             HHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhhhhcCCCcCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhccCcc
Confidence            9999999999999999865432 222222222211111100001112121                 011111   1112


Q ss_pred             chhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhC----CCC
Q 046539          256 NDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLG----NKE  331 (484)
Q Consensus       256 ~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~----~~~  331 (484)
                      .+|+++.+++..        .+++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++++.+    +..
T Consensus       249 ~~d~l~~ll~~~--------~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~  320 (472)
T PLN02987        249 KKDMLAALLASD--------DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYS  320 (472)
T ss_pred             cccHHHHHHhcC--------CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCC
Confidence            468888888652        14899999999999999999999999999999999999999999999999874    245


Q ss_pred             CChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcc
Q 046539          332 PKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGV  411 (484)
Q Consensus       332 ~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~  411 (484)
                      +++++++++||++||++|+||++|+++.++|++.+|++++||.||||+.|+++.+.+|+||++| +||++|+||||++++
T Consensus       321 ~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~-~~p~~F~PeRfl~~~  399 (472)
T PLN02987        321 LEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYF-KDARTFNPWRWQSNS  399 (472)
T ss_pred             CCHHHHhcChHHHHHHHHHHHccCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCcccC-CCccccCcccCCCCC
Confidence            7889999999999999999999999998889999999999999999999999999999999999 999999999999753


Q ss_pred             hhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCCCCcceeccCCCcceeeecC
Q 046539          412 SKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       412 ~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      ... . ....++|||+|+|.|+|++||++|++++++.|+++|+|++.++....+  ..+++|.+++++++++|
T Consensus       400 ~~~-~-~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~--~~~~~p~~~~~~~~~~r  468 (472)
T PLN02987        400 GTT-V-PSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDKLVF--FPTTRTQKRYPINVKRR  468 (472)
T ss_pred             CCC-C-CCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCceee--cccccCCCCceEEEEec
Confidence            321 1 226799999999999999999999999999999999999987654333  34789999999999987


No 28 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1.1e-66  Score=513.74  Aligned_cols=419  Identities=23%  Similarity=0.395  Sum_probs=331.5

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCC-
Q 046539           41 FSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHD-  119 (484)
Q Consensus        41 ~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~-  119 (484)
                      --|-.|+|++|+.+++.....             -++++..+.+|+++||++|++++|+.+.++++||+++++++.+.+ 
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~   80 (489)
T PLN02936         14 WGDDSGIPVADAKLEDVTDLL-------------GGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGS   80 (489)
T ss_pred             CCCCCCCccHHhHHhhHHHHh-------------ccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccc
Confidence            357889999999999886322             135678999999999999999999999999999999999998764 


Q ss_pred             cccCCCCCc-cccccccceeecCCcchhHHHhhhccCCChHHHhhhHH-HHHHHHHHHHHHHHHHHhcCCCCcccchHHH
Q 046539          120 IFQKPKGNS-LGKLVVNGMVTYEGEQWSKVRKIANPAFHQDKLKDMLP-KMYLSCNHMIRKLFEIAASDEESFELDIWPH  197 (484)
Q Consensus       120 ~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~-~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~  197 (484)
                      .|.++.... ...+++.++++.+|+.|+++|+++++.|+..+++.+.+ .+.++++.+++.|.+...   ++..+|+.++
T Consensus        81 ~f~~~~~~~~~~~~~~~~i~~~~g~~wk~~Rk~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~---~g~~vd~~~~  157 (489)
T PLN02936         81 KYAKGLVAEVSEFLFGSGFAIAEGELWTARRRAVVPSLHRRYLSVMVDRVFCKCAERLVEKLEPVAL---SGEAVNMEAK  157 (489)
T ss_pred             cccCcchhhhhHHHhcCccccCCchHHHHHHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCceeHHHH
Confidence            777765433 23346778888999999999999999999888887654 788899999999986532   3457999999


Q ss_pred             HHHHHHHHHHHHHhCCCccch---hHHHHHHHHHHHHHHh----hhc-------ccccchhH-----------------H
Q 046539          198 IQALAADVISRTAFGSNYDDG---RKIFELIREQSHLFIE----VSQ-------FDYIPGWR-----------------E  246 (484)
Q Consensus       198 ~~~~~~~~i~~~~fG~~~~~~---~~~~~~~~~~~~~~~~----~~~-------~~~~p~~~-----------------~  246 (484)
                      ++.+++|+++.++||.+++..   .++...+.........    ...       ....|.+.                 +
T Consensus       158 ~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~  237 (489)
T PLN02936        158 FSQLTLDVIGLSVFNYNFDSLTTDSPVIQAVYTALKEAETRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVD  237 (489)
T ss_pred             HHHHHHHHHHHHHcCCCccccccCcHHHHHHHHHHHHHHHhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999987532   2222222221111100    000       00122221                 0


Q ss_pred             HHHH---hcc----------CCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcCh
Q 046539          247 EALR---IGK----------ASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHP  313 (484)
Q Consensus       247 ~~~~---~~~----------~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p  313 (484)
                      +..+   ...          ....++++.++...        ..++++++.+++..+++||+|||+++++|++++|++||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~--------~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p  309 (489)
T PLN02936        238 KCKEIVEAEGEVIEGEEYVNDSDPSVLRFLLASR--------EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNP  309 (489)
T ss_pred             HHHHHHhhcccccccccccccCchHHHHHHHhcc--------ccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCH
Confidence            0000   000          12356777776542        13789999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCccccc-ccccccceecCEEeCCCCeEEechhhhhcCC
Q 046539          314 IWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIF-RTNVEETKLGDFILPPGVLLSLPIILVHHDH  392 (484)
Q Consensus       314 ~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~-R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~  392 (484)
                      ++|+++++|+++++++..++++++++|||++|||+||||++||++... |.+.+|+.++||.||+|+.|+++.+++||||
T Consensus       310 ~~~~kl~~Ei~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~  389 (489)
T PLN02936        310 EALRKAQEELDRVLQGRPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSP  389 (489)
T ss_pred             HHHHHHHHHHHHHhcCCCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCCh
Confidence            999999999999998767899999999999999999999999998844 5556777789999999999999999999999


Q ss_pred             CCccCCCCCCCCCCCCCcchhh-hcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCCCCccee
Q 046539          393 EYWGDDAKAFNPDRFSEGVSKA-AKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAPSSGITV  471 (484)
Q Consensus       393 ~~~g~~p~~F~P~R~l~~~~~~-~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~  471 (484)
                      ++| +||++|+||||+.++... .......++|||.|+|.|+|++||++|++++++.|+++|+++++++.......++++
T Consensus       390 ~~~-~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~  468 (489)
T PLN02936        390 EVW-ERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVMTTGATI  468 (489)
T ss_pred             hhC-CCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccceecceEE
Confidence            999 899999999999753211 111125799999999999999999999999999999999999987654333445677


Q ss_pred             ccCCCcceeeecC
Q 046539          472 YPQHGAHMILNKL  484 (484)
Q Consensus       472 ~~~~~~~v~~~~~  484 (484)
                      .|+++++|+++||
T Consensus       469 ~~~~~~~v~~~~R  481 (489)
T PLN02936        469 HTTNGLYMTVSRR  481 (489)
T ss_pred             eeCCCeEEEEEee
Confidence            8999999999987


No 29 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=2.6e-65  Score=503.00  Aligned_cols=392  Identities=20%  Similarity=0.300  Sum_probs=306.0

Q ss_pred             cchHHHHHHHhC-CceEEeeCCcCeEEeCCHHHHHHHHhhCC-cccCCCCCc--cccccccceeecCCcchhHHHhhhcc
Q 046539           79 LPYHHHIISKYG-KKSFKWMGPRPSINVQDPKLIREILLKHD-IFQKPKGNS--LGKLVVNGMVTYEGEQWSKVRKIANP  154 (484)
Q Consensus        79 ~~~~~~~~~~yG-~vf~~~~~~~~~vvv~dp~~i~~vl~~~~-~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~R~~~~~  154 (484)
                      ..++..+.++++ .+++++.++.  ++++||+++++++..+. .|.++..+.  +..++|+|+++.+|+.|+++|+++++
T Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g~gi~~~~g~~wk~~Rk~l~~  140 (502)
T PLN02426         63 CDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLGRGIFNVDGDSWRFQRKMASL  140 (502)
T ss_pred             HHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcCCceeecCcHHHHHHHHHhHh
Confidence            446666777877 4677766554  89999999999998764 677766442  44667899999999999999999999


Q ss_pred             CCChHHHhhhH--HHHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHHHHHHHhCCCccch------hHHHHHHH
Q 046539          155 AFHQDKLKDML--PKMYLSCNHMIRKLFEIAASDEESFELDIWPHIQALAADVISRTAFGSNYDDG------RKIFELIR  226 (484)
Q Consensus       155 ~f~~~~l~~~~--~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~------~~~~~~~~  226 (484)
                      .|+.++++.+.  +.+.+.++.+++.+.+..+.+ .+..+|+.++++.+++|+++.++||.+++..      .++...+.
T Consensus       141 ~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~l~~~~~~~~~~~~~~  219 (502)
T PLN02426        141 ELGSVSIRSYAFEIVASEIESRLLPLLSSAADDG-EGAVLDLQDVFRRFSFDNICKFSFGLDPGCLELSLPISEFADAFD  219 (502)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCceEcHHHHHHHHHHHHHHHHHhCCCCcccCCCCCccHHHHHHH
Confidence            99999888764  677777888888887653321 2357999999999999999999999876422      22333333


Q ss_pred             HHHHHHHhh--h-------ccccc--chhH-------------HH----HHHhccCCchhHHHHHHHhhhHhhHHhhcCC
Q 046539          227 EQSHLFIEV--S-------QFDYI--PGWR-------------EE----ALRIGKASNDDLLGLLMESNYKEIQEKEAGM  278 (484)
Q Consensus       227 ~~~~~~~~~--~-------~~~~~--p~~~-------------~~----~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~l  278 (484)
                      .+.......  .       ...++  |...             .+    ..+.+.....|+++.+++..          .
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~~dll~~ll~~~----------~  289 (502)
T PLN02426        220 TASKLSAERAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGFSASKDLLSRFMASI----------N  289 (502)
T ss_pred             HHHHHHHHHHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcccCCcchHHHHHHhcC----------C
Confidence            222111100  0       00011  1111             01    11111113457777777542          3


Q ss_pred             CHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCC--CCCChhhhccChhHHHHHHHhhcCCCC
Q 046539          279 SIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGN--KEPKFDELNRLKMVGKIIYEVFRIYSP  356 (484)
Q Consensus       279 ~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~--~~~~~~~~~~lp~l~a~i~E~lRl~p~  356 (484)
                      +++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++++.  ..++++++++|||++|||+|+||++||
T Consensus       290 ~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~  369 (502)
T PLN02426        290 DDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPP  369 (502)
T ss_pred             CHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCC
Confidence            678999999999999999999999999999999999999999999999873  367999999999999999999999999


Q ss_pred             ccccccccccccee-cCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccch
Q 046539          357 AYLIFRTNVEETKL-GDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQ  435 (484)
Q Consensus       357 ~~~~~R~~~~d~~i-~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~  435 (484)
                      ++...|.+.+|.++ +||.|||||.|.++.+++||||++||+||++|+||||+++.......+ ..++|||+|+|.|+|+
T Consensus       370 v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~~-~~~~pFg~G~R~CiG~  448 (502)
T PLN02426        370 VQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPENP-FKYPVFQAGLRVCLGK  448 (502)
T ss_pred             CCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCCCCC-cccCCCCCCCCCCccH
Confidence            99988999999887 999999999999999999999999999999999999997421111122 6799999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcEEEeCCCcc--cCCCCcceeccCCCcceeeecC
Q 046539          436 NFALMEVKLALAMILQNFSFQLSPTYV--HAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       436 ~la~~~~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      ++|++|++++++.|+++|++++.++..  .....+.+++|+++++|++++|
T Consensus       449 ~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r  499 (502)
T PLN02426        449 EMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRER  499 (502)
T ss_pred             HHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEc
Confidence            999999999999999999999864322  2334567889999999999987


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.3e-63  Score=447.86  Aligned_cols=415  Identities=20%  Similarity=0.269  Sum_probs=331.8

Q ss_pred             CCCCCCC-CCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhC
Q 046539           40 GFSGNSY-KIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKH  118 (484)
Q Consensus        40 ~~Pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~  118 (484)
                      .||--.+ .||+|+...|.+                  +|..|+++..+|||+||++.++|+.+.++.||+....++...
T Consensus        32 ~PPli~gwiP~lG~a~~fgk------------------~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~   93 (486)
T KOG0684|consen   32 EPPLIKGWIPWLGSALAFGK------------------DPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAK   93 (486)
T ss_pred             CCcccccCcchhhHHHHhcc------------------CHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCc
Confidence            4676666 689999999976                  789999999999999999999999999999999999999876


Q ss_pred             C-cccCCCCCc--cccccccceee-cCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHH-HHHHHhcCCCCcccc
Q 046539          119 D-IFQKPKGNS--LGKLVVNGMVT-YEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRK-LFEIAASDEESFELD  193 (484)
Q Consensus       119 ~-~~~~~~~~~--~~~~~g~~~~~-~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~-l~~~~~~~~~~~~vd  193 (484)
                      . .++....+.  ..+.+|.|+.. .++..+.++.+++...+...+++++.+.|.++..+.++. |.+      ++....
T Consensus        94 ~~~ld~~~~~~~l~~~vFg~~v~~d~~~~~~~e~~~~~k~~L~~~~lk~~~e~m~~el~~~f~~~~~~------s~~~d~  167 (486)
T KOG0684|consen   94 LADLDFEEAYSKLTTPVFGKGVVYDVPNHVMMEQKKFFKSALGGVALKSLVELMLEELHAYFETSLGE------SGETDG  167 (486)
T ss_pred             ccccCHHHHHHHhhhhhcCCCccccCCCchHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhccccc------ccchhH
Confidence            3 455444332  67788988665 678889999999999999999999999999999998887 442      344555


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCccc-hhHHHHHHHHHHHHHHh---hhc-ccccchhH-----------------HHHHHh
Q 046539          194 IWPHIQALAADVISRTAFGSNYDD-GRKIFELIREQSHLFIE---VSQ-FDYIPGWR-----------------EEALRI  251 (484)
Q Consensus       194 l~~~~~~~~~~~i~~~~fG~~~~~-~~~~~~~~~~~~~~~~~---~~~-~~~~p~~~-----------------~~~~~~  251 (484)
                      +........+.+.....||..... +++....+.++...+..   .+. ...+|..+                 .++.+.
T Consensus       168 l~~~~~~ii~tAs~~ll~~e~r~~~d~~~a~l~~dLd~~F~~~d~~FP~~LP~~~~r~~~ra~~~i~k~f~~~i~~rr~s  247 (486)
T KOG0684|consen  168 LYTFCRLIIFTASRLLLGGEVRDQLDADVAKLYHDLDQGFQPFDFLFPYNLPIPLLRRRDRARKKISKIFSKIILDRRAS  247 (486)
T ss_pred             hhhhhHHHhhhhHHHhhhhhhhhhhcchHHHHHHHHhccccchHhhcccCCCcchhhhHHHHHHHHHHHHHHHHHHHHhc
Confidence            666666666777666667764433 22333333333332222   111 12223322                 011112


Q ss_pred             ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCC--
Q 046539          252 GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGN--  329 (484)
Q Consensus       252 ~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~--  329 (484)
                      ..+...|+++.+++ ..+    .+...+++|+.+..+.+++||+.||+.+.+|++++|++|||+++.+++|+.+++|.  
T Consensus       248 ~s~~~~dmlq~l~~-~y~----dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~  322 (486)
T KOG0684|consen  248 ISKWDNDMLQSLME-KYK----DGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKK  322 (486)
T ss_pred             cccccHHHHHHHHH-Hhh----cCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccC
Confidence            22345688888887 222    24568999999999999999999999999999999999999999999999999983  


Q ss_pred             CCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecC----EEeCCCCeEEechhhhhcCCCCccCCCCCCCCC
Q 046539          330 KEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGD----FILPPGVLLSLPIILVHHDHEYWGDDAKAFNPD  405 (484)
Q Consensus       330 ~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g----~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~  405 (484)
                      ...+.+.+++||.|+.||+|||||+||.+.+.|.+.+|.++.+    |.||+|..|.+++..+|+||++| +||+.|+|+
T Consensus       323 ~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif-~dp~~Fk~d  401 (486)
T KOG0684|consen  323 EKLTYDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIF-PDPEDFKPD  401 (486)
T ss_pred             CCCCHHHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCcccc-CChhhCChh
Confidence            3479999999999999999999999999999999999999966    99999999999999999999999 999999999


Q ss_pred             CCCCcchhhh---cCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCC-CCcceeccCCCcceee
Q 046539          406 RFSEGVSKAA---KNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAP-SSGITVYPQHGAHMIL  481 (484)
Q Consensus       406 R~l~~~~~~~---~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~-~~~~~~~~~~~~~v~~  481 (484)
                      ||++++++..   ..-++.+||||+|+|.|||+.||.+|++.++..+|+.||+++.++..++. .+..++.|.++++|+.
T Consensus       402 Rf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~s~~v~~P~g~v~irY  481 (486)
T KOG0684|consen  402 RFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDYSRMVMQPEGDVRIRY  481 (486)
T ss_pred             hccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCHHHhhcCCCCCceEEE
Confidence            9998655441   22235679999999999999999999999999999999999998643332 4456888999999999


Q ss_pred             ecC
Q 046539          482 NKL  484 (484)
Q Consensus       482 ~~~  484 (484)
                      +.|
T Consensus       482 K~R  484 (486)
T KOG0684|consen  482 KRR  484 (486)
T ss_pred             eec
Confidence            876


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=2.2e-60  Score=460.72  Aligned_cols=392  Identities=16%  Similarity=0.205  Sum_probs=299.6

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCC-ceEEeeCCcCe-------EEeCCHHHH
Q 046539           40 GFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGK-KSFKWMGPRPS-------INVQDPKLI  111 (484)
Q Consensus        40 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~-vf~~~~~~~~~-------vvv~dp~~i  111 (484)
                      .|||+.++|++|+..++.+..             ...++..|+.+.++|||+ ||+++++|.|+       |+++||+++
T Consensus        18 ~PPg~~g~P~iG~~~~~~~~~-------------~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~   84 (480)
T PLN02648         18 EIPGSYGLPFLGAIKDRLDYF-------------YFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSF   84 (480)
T ss_pred             CCCCCCCCcCcchhhhhhhHH-------------HhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCce
Confidence            689999999999999876521             123567899999999999 99999999766       999999999


Q ss_pred             HHHHhh----CC-cccCCCCCcccccccc----ceeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHH
Q 046539          112 REILLK----HD-IFQKPKGNSLGKLVVN----GMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEI  182 (484)
Q Consensus       112 ~~vl~~----~~-~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~  182 (484)
                      +.+|.+    ++ .+......... ++|.    +++..+|+.|+++|+++.+.|+ ..++.+.+.|.+.++++++.|...
T Consensus        85 ~~v~~~~~~~~~~~~~~~~~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~  162 (480)
T PLN02648         85 PVLFDVSKVDKRDVFTGTYMPSTA-FTGGYRVLSYLDPSEPKHAKLKSFLFELLK-SRHRRFIPEFRAAFAELFDTWEAE  162 (480)
T ss_pred             eeeecchhccccccceeeeccCcc-ccCCceeeeecCCCCchHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHHHHHHHHH
Confidence            999975    33 34443333344 7775    5667889999999999999999 577889999999999999999654


Q ss_pred             HhcCCCCcccchHHHHHHHHHHHHHHHHhCCCccchhHHHHHHHHHHHHHHh----hhcccccchhHHHHHHhc------
Q 046539          183 AASDEESFELDIWPHIQALAADVISRTAFGSNYDDGRKIFELIREQSHLFIE----VSQFDYIPGWREEALRIG------  252 (484)
Q Consensus       183 ~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~p~~~~~~~~~~------  252 (484)
                      ..   .+.++|+.+.++.+++|++++++||.+.+. +++......+......    ......++.+.++.+...      
T Consensus       163 ~~---~~~~vdv~~~~~~lt~~vi~~~lfG~~~~~-~~l~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~i~~~~~~~~~  238 (480)
T PLN02648        163 LA---KKGKAEFNDPLDQMAFNFLCKALTGKDPSE-TALGSDGPALIQKWLALQLAPLASTGLPHVLEELLLHTFPLPFF  238 (480)
T ss_pred             Hh---hCCCccccchHHHHHHHHHHHHHcCCCcch-hhhccchhHHHHHHHHHHhhHHHHcCchHHHHHHhhcccCCchh
Confidence            22   234699999999999999999999987654 1121111111110000    000112222211111100      


Q ss_pred             --cCCchhHHH-------HHHHhhhHhhHHhhcCCCHHHHHHHHHH-HHhcccccHHHHHHHHHHHHhcChH-HHHHHHH
Q 046539          253 --KASNDDLLG-------LLMESNYKEIQEKEAGMSIEEVIEECKL-FYLAGQETTASLLVWVLIMLCMHPI-WQERARQ  321 (484)
Q Consensus       253 --~~~~~~~l~-------~ll~~~~~~~~~~~~~l~~~~i~~~~~~-~~~aG~~tt~~~l~~~l~~L~~~p~-~~~~l~~  321 (484)
                        ....+++++       .+++...      ..+++++|++++++. +.+++++||+++++|++++|++||+ +|+++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~ll~~~~------~~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~  312 (480)
T PLN02648        239 LVKSDYDKLYDFFRASATEALDLAE------KFGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAE  312 (480)
T ss_pred             hhhccHHHHHHHHHHHHHHHHHHHH------hcCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence              112223333       3333221      135999999999875 4456777788899999999999995 9999999


Q ss_pred             HHHHHhC--CCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceec----CEEeCCCCeEEechhhhhcCCCCc
Q 046539          322 EVFQVLG--NKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLG----DFILPPGVLLSLPIILVHHDHEYW  395 (484)
Q Consensus       322 Ei~~~~~--~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~----g~~Ip~G~~v~~~~~~~~~d~~~~  395 (484)
                      |++++.+  +..++++++++|||+++||+|+||++|+++.+.|++.+|++++    ||.||||+.|+++.+.+||||++|
T Consensus       313 Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~  392 (480)
T PLN02648        313 EVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVF  392 (480)
T ss_pred             HHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccC
Confidence            9999986  3468999999999999999999999999999889999999996    799999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCcchhhhcCCCCccccc---------CCCCCCccchHHHHHHHHHHHHHHHHhcE-EEeCCCc
Q 046539          396 GDDAKAFNPDRFSEGVSKAAKNNEVSFFPF---------GGGPRICIGQNFALMEVKLALAMILQNFS-FQLSPTY  461 (484)
Q Consensus       396 g~~p~~F~P~R~l~~~~~~~~~~~~~~~~F---------g~G~r~C~G~~la~~~~~~~l~~ll~~f~-~~~~~~~  461 (484)
                       +||++|+|+||++.++..   . ..+++|         |.|+|.|+|++||++|++++++.|+++|+ |++.++.
T Consensus       393 -~dP~~F~PeRf~~~~~~~---~-~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~  463 (480)
T PLN02648        393 -DRPEEFVPDRFMGEEGEK---L-LKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDT  463 (480)
T ss_pred             -CCcceeCCCCCCCCCccc---c-ccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCc
Confidence             999999999998743211   1 234444         67789999999999999999999999998 9988764


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=3.6e-53  Score=405.92  Aligned_cols=362  Identities=25%  Similarity=0.404  Sum_probs=286.1

Q ss_pred             hHHHHHHHhCCceEEeeCCcC--eEEeCCHHHHHHHHhhCCcccCCCCCc-----cccccccc-eeecCCcchhHHHhhh
Q 046539           81 YHHHIISKYGKKSFKWMGPRP--SINVQDPKLIREILLKHDIFQKPKGNS-----LGKLVVNG-MVTYEGEQWSKVRKIA  152 (484)
Q Consensus        81 ~~~~~~~~yG~vf~~~~~~~~--~vvv~dp~~i~~vl~~~~~~~~~~~~~-----~~~~~g~~-~~~~~~~~~~~~R~~~  152 (484)
                      +...+.+.||.++..+..+.-  .++++++++++++++++..+++.....     ....+|.+ +++.||+.|+++|+++
T Consensus        27 ~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~Rkl~  106 (411)
T COG2124          27 FLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPRFFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLRKLL  106 (411)
T ss_pred             hHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcccccccccccccccchhhhccccceeecCCHHHHHHHHHh
Confidence            445666778888887776543  799999999999998875333332211     34566766 8889999999999999


Q ss_pred             ccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHHHHHHHhCCCccchhHHHHHHHHHHHHH
Q 046539          153 NPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHIQALAADVISRTAFGSNYDDGRKIFELIREQSHLF  232 (484)
Q Consensus       153 ~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~  232 (484)
                      +++|+++.++++.+.|.+.++++++.+ .      .+..+++.+.+..++.++++ .+||.+.++......+........
T Consensus       107 ~~~F~~~~~~~~~~~i~~~~~~~~~~~-~------~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~~~~~~~~~~~~~~  178 (411)
T COG2124         107 APAFTPRALRGYRPLIREIADRLLDDL-W------QGGADLVLDFAAELTLRVIA-ELLGVPLEDRPQLLRWSDALLLRL  178 (411)
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHHhc-c------cCCchhHHHHhhhhhHHHHH-HHhCCCHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999998 3      22567888999999999999 899998876655554444333221


Q ss_pred             HhhhcccccchhH------------HHHHHh-ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHH
Q 046539          233 IEVSQFDYIPGWR------------EEALRI-GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTA  299 (484)
Q Consensus       233 ~~~~~~~~~p~~~------------~~~~~~-~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~  299 (484)
                      . .......+.+.            ...++. .....+|+++.++....++    +..++++|++++++++++||+|||+
T Consensus       179 ~-~~~~~~~~~~~~~~a~~~~~~~~~~li~~rR~~~~~dlls~l~~a~~~~----~~~lsd~Ei~~~~~~ll~AGheTTa  253 (411)
T COG2124         179 D-PDLGPEEPWRRARAARRELDAYLRALIAERRAAPRDDLLSLLLSAEDDG----GGRLSDDEIRDELITLLVAGHETTA  253 (411)
T ss_pred             C-cccCCcccHHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHhhCC----CCcCCHHHHHHHHHHHHHhhhHHHH
Confidence            0 00000111111            122222 2346788999998776543    2259999999999999999999999


Q ss_pred             HHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCC
Q 046539          300 SLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGV  379 (484)
Q Consensus       300 ~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~  379 (484)
                      ++++|+++.|++||++++++++|.+.               ||+.++|+|+||++||++.+.|.+++|++++|+.||||+
T Consensus       254 ~~l~~a~~~L~~~P~~~~~l~~e~~~---------------~~~~~~v~E~LR~~ppv~~~~R~~~~d~~igg~~Ip~G~  318 (411)
T COG2124         254 NALAWALYALLRHPDQLAKLRAEPDR---------------PLLEAVVEETLRLYPPVPLARRVATEDVELGGYRIPAGT  318 (411)
T ss_pred             HHHHHHHHHHHHCchHHHHHHhCcch---------------HHHHHHHHHHHHhCCchhccceeccCCEeeCCEEeCCCC
Confidence            99999999999999999999998433               899999999999999999988999999999999999999


Q ss_pred             eEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCC
Q 046539          380 LLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSP  459 (484)
Q Consensus       380 ~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~  459 (484)
                      .|+++++.+||||+.| +||++|+|+||.           ..|+|||+|+|.|+|.+||++|++++++.++++|++....
T Consensus       319 ~V~~~~~~anrDp~~f-~~P~~F~p~R~~-----------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~  386 (411)
T COG2124         319 VVLLSIGAANRDPEVF-PDPDEFDPERFN-----------NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLA  386 (411)
T ss_pred             EEEecHhhhcCChhhC-CChhhcCCCCCC-----------CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcC
Confidence            9999999999999999 999999999988           4689999999999999999999999999999999977655


Q ss_pred             CcccCCCCcceeccCCCcceeeec
Q 046539          460 TYVHAPSSGITVYPQHGAHMILNK  483 (484)
Q Consensus       460 ~~~~~~~~~~~~~~~~~~~v~~~~  483 (484)
                      ++ .......+..+.....+.++.
T Consensus       387 ~~-~~~~~~~~~~~~g~~~l~v~~  409 (411)
T COG2124         387 EP-PPLVRRPTLVPRGGERLPVRR  409 (411)
T ss_pred             CC-CCccccccccCCCcceeeeec
Confidence            52 222333344555455555443


No 33 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=61.96  E-value=31  Score=21.63  Aligned_cols=42  Identities=14%  Similarity=0.104  Sum_probs=34.3

Q ss_pred             HHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHH
Q 046539          282 EVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEV  323 (484)
Q Consensus       282 ~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  323 (484)
                      ++...+..++-.|-|..+-.++-.+.+.--||+....+.+|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            456666677778888888888888888889999998888875


No 34 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=60.40  E-value=6.5  Score=25.83  Aligned_cols=8  Identities=25%  Similarity=0.713  Sum_probs=6.6

Q ss_pred             CCCCCCCc
Q 046539          403 NPDRFSEG  410 (484)
Q Consensus       403 ~P~R~l~~  410 (484)
                      ||||||+-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            69999975


No 35 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=45.64  E-value=18  Score=30.90  Aligned_cols=44  Identities=11%  Similarity=0.234  Sum_probs=32.1

Q ss_pred             cChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCCeEEe
Q 046539          339 RLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLSL  383 (484)
Q Consensus       339 ~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~~  383 (484)
                      .-....|||.|+.-..... .+.=+..+|+.++|..|||||.++-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs-~vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGS-RVRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCC-EEEEEEcCceEECCEEeCCCCEEEE
Confidence            3456788999998765422 2323457999999999999998774


No 36 
>PHA02902 putative IMV membrane protein; Provisional
Probab=45.42  E-value=61  Score=21.47  Aligned_cols=7  Identities=0%  Similarity=-0.159  Sum_probs=3.7

Q ss_pred             CCCCCCC
Q 046539           40 GFSGNSY   46 (484)
Q Consensus        40 ~~Pgp~~   46 (484)
                      .+|.|..
T Consensus        29 ci~sP~~   35 (70)
T PHA02902         29 CIPSPDD   35 (70)
T ss_pred             CCCCCCC
Confidence            5665543


No 37 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=39.66  E-value=29  Score=22.66  Aligned_cols=19  Identities=16%  Similarity=0.198  Sum_probs=16.3

Q ss_pred             HHHHHHhcChHHHHHHHHH
Q 046539          304 WVLIMLCMHPIWQERARQE  322 (484)
Q Consensus       304 ~~l~~L~~~p~~~~~l~~E  322 (484)
                      -++-+|.+||++.+++.+.
T Consensus         4 ~iV~YLv~nPevl~kl~~g   22 (57)
T PF05952_consen    4 EIVNYLVQNPEVLEKLKEG   22 (57)
T ss_pred             HHHHHHHHChHHHHHHHcC
Confidence            4677999999999999864


No 38 
>PF13131 DUF3951:  Protein of unknown function (DUF3951)
Probab=37.42  E-value=61  Score=20.36  Aligned_cols=27  Identities=19%  Similarity=0.118  Sum_probs=12.2

Q ss_pred             CchhhHHH-HHHHHHHHHHHHHHHHHhc
Q 046539            1 MSLAFFSA-FATIILAYCAWKILNWAWL   27 (484)
Q Consensus         1 ~~~~~~~~-l~~~~~~~~~~~~~~~~~~   27 (484)
                      |.|..+.+ ++.++++.++..+.+.++.
T Consensus         1 miL~tiG~~~~~~~I~~lIgfity~mfV   28 (53)
T PF13131_consen    1 MILLTIGIILFTIFIFFLIGFITYKMFV   28 (53)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHhhe
Confidence            55555553 3333333344444454444


No 39 
>PF07219 HemY_N:  HemY protein N-terminus;  InterPro: IPR010817 This entry represents the N terminus (approximately 150 residues) of bacterial HemY porphyrin biosynthesis proteins. These are membrane protein involved in a late step of protoheme IX synthesis [].
Probab=36.63  E-value=72  Score=24.09  Aligned_cols=24  Identities=13%  Similarity=0.320  Sum_probs=14.3

Q ss_pred             HHHHHHHHHHHHHHHHHhcchHHH
Q 046539            9 FATIILAYCAWKILNWAWLKPKKL   32 (484)
Q Consensus         9 l~~~~~~~~~~~~~~~~~~~p~~~   32 (484)
                      +.++++++++++++...+..|...
T Consensus        24 ~~~~~~l~ll~~ll~~~~~~p~~~   47 (108)
T PF07219_consen   24 LLLFVVLYLLLRLLRRLLSLPSRV   47 (108)
T ss_pred             HHHHHHHHHHHHHHHHHHhChHHH
Confidence            344444556677777777766543


No 40 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=36.11  E-value=13  Score=30.37  Aligned_cols=36  Identities=22%  Similarity=0.535  Sum_probs=24.6

Q ss_pred             CCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchH
Q 046539          400 KAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQN  436 (484)
Q Consensus       400 ~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~  436 (484)
                      .+|||++|-.--=. ...|+.+.+-|..|+-.|-|..
T Consensus        35 aeYnP~qFpGlv~R-l~ePk~a~LIF~SGK~VcTGaK   70 (185)
T COG2101          35 AEYNPEQFPGLVYR-LEEPKTAALIFRSGKVVCTGAK   70 (185)
T ss_pred             CccCHhHCCeeEEE-ecCCcceEEEEecCcEEEeccC
Confidence            46778887531000 1235578999999999999854


No 41 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=35.97  E-value=40  Score=27.10  Aligned_cols=42  Identities=21%  Similarity=0.496  Sum_probs=30.4

Q ss_pred             cccccceecCEEeCCCCeEEechh-------hhhcCCCCccCCCCCCCCCC
Q 046539          363 TNVEETKLGDFILPPGVLLSLPII-------LVHHDHEYWGDDAKAFNPDR  406 (484)
Q Consensus       363 ~~~~d~~i~g~~Ip~G~~v~~~~~-------~~~~d~~~~g~~p~~F~P~R  406 (484)
                      ...+|+.++|..||+|+--+..+.       .+|++...||.  ..++|+.
T Consensus        51 ~f~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~--~~Y~~~~   99 (145)
T PF11138_consen   51 TFSKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA--YNYDPSK   99 (145)
T ss_pred             EECCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc--cccCchh
Confidence            346899999999999986665544       35778888873  5566554


No 42 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=34.73  E-value=18  Score=23.04  Aligned_cols=11  Identities=45%  Similarity=0.842  Sum_probs=9.3

Q ss_pred             cccCCCCCCcc
Q 046539          423 FPFGGGPRICI  433 (484)
Q Consensus       423 ~~Fg~G~r~C~  433 (484)
                      -+||-|.|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            46999999985


No 43 
>PRK06789 flagellar motor switch protein; Validated
Probab=33.27  E-value=60  Score=22.60  Aligned_cols=38  Identities=13%  Similarity=0.167  Sum_probs=30.0

Q ss_pred             HHHhhcCCCCccc-ccccccccc--eecCEEeCCCCeEEec
Q 046539          347 IYEVFRIYSPAYL-IFRTNVEET--KLGDFILPPGVLLSLP  384 (484)
Q Consensus       347 i~E~lRl~p~~~~-~~R~~~~d~--~i~g~~Ip~G~~v~~~  384 (484)
                      ++|.+.+.+..-. +-|.+.+++  .++|..|.+|..|.++
T Consensus        22 i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         22 IEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             HHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            7888999886655 667776655  5589999999999876


No 44 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=32.28  E-value=35  Score=26.75  Aligned_cols=23  Identities=13%  Similarity=0.501  Sum_probs=17.0

Q ss_pred             CCccchHHHHHHHHHHHHHHHHh
Q 046539          430 RICIGQNFALMEVKLALAMILQN  452 (484)
Q Consensus       430 r~C~G~~la~~~~~~~l~~ll~~  452 (484)
                      -+|.|+.||+.++-.+++.|+..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            48999999999999999999864


No 45 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=31.30  E-value=36  Score=22.94  Aligned_cols=15  Identities=33%  Similarity=0.293  Sum_probs=12.6

Q ss_pred             ChhHHHHHHHhhcCC
Q 046539          340 LKMVGKIIYEVFRIY  354 (484)
Q Consensus       340 lp~l~a~i~E~lRl~  354 (484)
                      ..++..+|+|++|+-
T Consensus        40 ~~fv~~~IkEA~RFk   54 (65)
T PF15300_consen   40 KQFVEMIIKEAARFK   54 (65)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            457999999999974


No 46 
>TIGR00589 ogt O-6-methylguanine DNA methyltransferase. All proteins in this family for which functions are known are involved alkyl-DNA transferases which remove alkyl groups from DNA as part of alkylation DNA repair. Some of the proteins in this family are also transcription regulators and have a distinct transcription regulatory domain. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=31.03  E-value=1e+02  Score=21.79  Aligned_cols=60  Identities=13%  Similarity=0.073  Sum_probs=40.4

Q ss_pred             HHHHHHHHHHHHHhCCCCCChhhhcc---ChhHHHHHHHhhcCCCCccccc--ccccccceecCE
Q 046539          314 IWQERARQEVFQVLGNKEPKFDELNR---LKMVGKIIYEVFRIYSPAYLIF--RTNVEETKLGDF  373 (484)
Q Consensus       314 ~~~~~l~~Ei~~~~~~~~~~~~~~~~---lp~l~a~i~E~lRl~p~~~~~~--R~~~~d~~i~g~  373 (484)
                      +.|+++.+.+.++--+...|+.++.+   .|--...+--+++-+|....+|  |++..+-.++||
T Consensus         2 ~f~~~V~~~l~~IP~G~v~TYg~iA~~~g~p~~~RaVg~al~~np~~~~iPcHRVv~s~G~l~~y   66 (80)
T TIGR00589         2 PFQQRVWQALRTIPYGETKSYGQLAARIGNPKAVRAVGGANGRNPLAILVPCHRVIGKNGSLTGY   66 (80)
T ss_pred             hHHHHHHHHHhCCCCCCcCCHHHHHHHhCCCChHHHHHHHHHhCCCCCCCCCceeECCCCCCCCC
Confidence            56788888887765477778877753   3444455666777776544444  777778778776


No 47 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=30.41  E-value=55  Score=24.76  Aligned_cols=10  Identities=10%  Similarity=-0.044  Sum_probs=7.1

Q ss_pred             CCCCCCHHHH
Q 046539           47 KIFHGDTKDM   56 (484)
Q Consensus        47 ~p~~G~~~~~   56 (484)
                      -|+.||+...
T Consensus        46 ~p~YgNL~~~   55 (107)
T PF15330_consen   46 DPCYGNLELQ   55 (107)
T ss_pred             Cccccccccc
Confidence            5778887654


No 48 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=29.76  E-value=35  Score=24.36  Aligned_cols=21  Identities=19%  Similarity=0.523  Sum_probs=18.0

Q ss_pred             HHHHHHHHHHHHhcEEEeCCC
Q 046539          440 MEVKLALAMILQNFSFQLSPT  460 (484)
Q Consensus       440 ~~~~~~l~~ll~~f~~~~~~~  460 (484)
                      .-|+.++..+|+-|||+|.+-
T Consensus        60 ~~IrdAVsqVLkGYDWtLVPm   80 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVPM   80 (84)
T ss_pred             HHHHHHHHHHhccCCceeeec
Confidence            457889999999999998764


No 49 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=25.87  E-value=38  Score=29.05  Aligned_cols=20  Identities=30%  Similarity=0.629  Sum_probs=17.9

Q ss_pred             hhhhcCCCCccCCCCCCCCCC
Q 046539          386 ILVHHDHEYWGDDAKAFNPDR  406 (484)
Q Consensus       386 ~~~~~d~~~~g~~p~~F~P~R  406 (484)
                      +.-|.|+.+| .|...|+|.|
T Consensus       192 ~~~n~~~~FY-~d~~~FRp~R  211 (212)
T PF11227_consen  192 WPDNEDPAFY-DDTDVFRPGR  211 (212)
T ss_pred             CCCCCCcccc-cCccccCCCC
Confidence            4558999999 9999999988


No 50 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=22.93  E-value=1.4e+02  Score=23.35  Aligned_cols=41  Identities=17%  Similarity=0.373  Sum_probs=30.0

Q ss_pred             cccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCC
Q 046539           77 RILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHD  119 (484)
Q Consensus        77 ~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~  119 (484)
                      +....+++|.++||.+-. . .+...+...|++.++++...+.
T Consensus        75 ~v~~~i~~w~~~~g~v~l-~-~~~~~l~~~d~~~l~~l~~~~~  115 (129)
T PF13625_consen   75 NVEQSIEDWARRYGRVRL-Y-KGAYLLECDDPELLDELLADPE  115 (129)
T ss_pred             HHHHHHHHHHHhcCCEEE-e-cCeEEEEECCHHHHHHHHhChh
Confidence            445588999999998422 1 1355777889999999987654


No 51 
>PF08285 DPM3:  Dolichol-phosphate mannosyltransferase subunit 3 (DPM3);  InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=22.80  E-value=1.3e+02  Score=21.92  Aligned_cols=30  Identities=10%  Similarity=0.020  Sum_probs=24.5

Q ss_pred             HHHHHHHHHHHHhcChHHHHHHHHHHHHHh
Q 046539          298 TASLLVWVLIMLCMHPIWQERARQEVFQVL  327 (484)
Q Consensus       298 t~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  327 (484)
                      ...++.|.++..-..||..+.+++||+++-
T Consensus        52 sl~~lgy~v~tFnDcpeA~~eL~~eI~eAK   81 (91)
T PF08285_consen   52 SLFTLGYGVATFNDCPEAAKELQKEIKEAK   81 (91)
T ss_pred             HHHHHHHhhhccCCCHHHHHHHHHHHHHHH
Confidence            345677888888888999999999998873


No 52 
>PF08599 Nbs1_C:  DNA damage repair protein Nbs1;  InterPro: IPR013908  This C-terminal region of the DNA damage repair protein Nbs1 has been identified to be necessary for the binding of Mre11 and Tel1 []. 
Probab=22.34  E-value=51  Score=21.76  Aligned_cols=25  Identities=8%  Similarity=0.073  Sum_probs=18.2

Q ss_pred             HHHHHHhcCCCCCCCCC-CCCCHHHH
Q 046539           32 LENFLRQQGFSGNSYKI-FHGDTKDM   56 (484)
Q Consensus        32 ~~~~~~~~~~Pgp~~~p-~~G~~~~~   56 (484)
                      +.+++|+...||-.++| +||-.-.+
T Consensus         3 NFKkFkKv~~pGa~~lP~IIGGSDLi   28 (65)
T PF08599_consen    3 NFKKFKKVAYPGAGGLPHIIGGSDLI   28 (65)
T ss_pred             chhhhcccccCCCCCCCeeecchhhh
Confidence            45667777889998899 78755444


No 53 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=20.79  E-value=86  Score=17.57  Aligned_cols=14  Identities=29%  Similarity=0.797  Sum_probs=12.2

Q ss_pred             CcccccCCCCCCcc
Q 046539          420 VSFFPFGGGPRICI  433 (484)
Q Consensus       420 ~~~~~Fg~G~r~C~  433 (484)
                      ..|+++.+..|.|.
T Consensus        18 ~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   18 NTYQPYDGPRRFCR   31 (31)
T ss_pred             CcEeCCCCccccCc
Confidence            78999998899984


No 54 
>PRK00901 methylated-DNA--protein-cysteine methyltransferase; Provisional
Probab=20.57  E-value=1.6e+02  Score=24.08  Aligned_cols=62  Identities=10%  Similarity=0.041  Sum_probs=45.0

Q ss_pred             hHHHHHHHHHHHHHhCCCCCChhhhcc---ChhHHHHHHHhhcCCCCccccc--ccccccceecCEE
Q 046539          313 PIWQERARQEVFQVLGNKEPKFDELNR---LKMVGKIIYEVFRIYSPAYLIF--RTNVEETKLGDFI  374 (484)
Q Consensus       313 p~~~~~l~~Ei~~~~~~~~~~~~~~~~---lp~l~a~i~E~lRl~p~~~~~~--R~~~~d~~i~g~~  374 (484)
                      .+.|.++.+++.++--+...++.++.+   .|-....|--++.-+|....+|  |+...|-.++||.
T Consensus        72 t~fq~~Vw~~l~~Ip~G~t~tY~~lA~~~g~p~a~RAVg~A~~~NP~~iiIPCHRVv~~~G~lggy~  138 (155)
T PRK00901         72 TEFQKKVWKALQEIPYGETRSYKEIAVNIGNPKACRAVGLANNKNPIPIFIPCHRVIGANGKLVGYA  138 (155)
T ss_pred             ChHHHHHHHHHccCCCCCcCCHHHHHHHHCCCchHHHHHHHHHhCCCCCccCCceEECCCCCCCCCC
Confidence            578999999998775577788877753   3545567777888886544444  7777888888873


No 55 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=20.41  E-value=2.3e+02  Score=17.83  Aligned_cols=34  Identities=9%  Similarity=0.070  Sum_probs=23.2

Q ss_pred             HHHHHHhCCceEEeeCCcC----eEEeCCHHHHHHHHh
Q 046539           83 HHIISKYGKKSFKWMGPRP----SINVQDPKLIREILL  116 (484)
Q Consensus        83 ~~~~~~yG~vf~~~~~~~~----~vvv~dp~~i~~vl~  116 (484)
                      .+..++||+|-.+.+....    .|-..+++.++....
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            4567899998888775532    344568888887775


Done!