Query         046539
Match_columns 484
No_of_seqs    192 out of 2522
Neff          10.8
Searched_HMMs 29240
Date          Mon Mar 25 23:12:48 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046539.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046539hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3nxu_A Cytochrome P450 3A4; al 100.0 3.7E-76 1.3E-80  585.8  34.8  425   36-484    11-474 (485)
  2 3k9v_A 1,25-dihydroxyvitamin D 100.0 3.7E-75 1.3E-79  578.4  37.7  426   20-484    13-482 (482)
  3 2ve3_A Putative cytochrome P45 100.0 4.6E-74 1.6E-78  563.1  32.3  421   21-484     2-443 (444)
  4 3tbg_A Cytochrome P450 2D6; mo 100.0 7.7E-74 2.6E-78  568.5  33.1  420   39-484    10-475 (479)
  5 3ld6_A Lanosterol 14-alpha dem 100.0 2.4E-74 8.2E-79  568.3  28.9  414   39-484    11-453 (461)
  6 3n9y_A Cholesterol SIDE-chain  100.0 5.9E-72   2E-76  555.8  35.2  418   40-484    10-474 (487)
  7 3s79_A Cytochrome P450 19A1; o 100.0 5.6E-72 1.9E-76  558.3  34.9  413   39-484    45-495 (503)
  8 3swz_A Steroid 17-alpha-hydrox 100.0 1.6E-72 5.5E-77  560.6  30.1  424   38-484     7-478 (494)
  9 3e6i_A CYPIIE1, P450-J, cytoch 100.0   1E-71 3.4E-76  552.7  33.6  421   38-484     9-471 (476)
 10 1po5_A Cytochrome P450 2B4; ox 100.0 6.1E-72 2.1E-76  553.5  31.8  420   39-484    10-472 (476)
 11 1r9o_A Cytochrome P450 2C9; mo 100.0 7.4E-72 2.5E-76  553.2  32.0  419   40-484    12-473 (477)
 12 2fdv_A Cytochrome P450 2A6; CY 100.0 9.4E-72 3.2E-76  552.1  31.4  419   40-484    11-472 (476)
 13 3pm0_A Cypib1, cytochrome P450 100.0 1.2E-71 4.3E-76  556.5  29.8  423   39-484     9-483 (507)
 14 3czh_A Cytochrome P450 2R1; vi 100.0 1.1E-70 3.9E-75  544.6  34.3  422   39-484    12-475 (481)
 15 2hi4_A Cytochrome P450 1A2; CY 100.0 2.6E-71 9.1E-76  551.4  29.3  422   40-484    17-487 (495)
 16 2ij2_A Cytochrome P450 BM3; mo 100.0 3.3E-71 1.1E-75  546.5  29.1  416   39-484     3-451 (470)
 17 2cib_A Cytochrome P450 51; hem 100.0 7.7E-71 2.6E-75  541.9  29.6  414   39-484     4-448 (455)
 18 3dbg_A Putative cytochrome P45 100.0 9.2E-71 3.2E-75  543.6  27.5  407   39-480    23-457 (467)
 19 3qz1_A Steroid 21-hydroxylase; 100.0   3E-71   1E-75  552.1  22.6  393   76-484    43-483 (496)
 20 3gw9_A Sterol 14alpha-demethyl 100.0 7.3E-70 2.5E-74  535.6  30.2  405   39-484     3-449 (450)
 21 3mdm_A Cholesterol 24-hydroxyl 100.0 4.4E-69 1.5E-73  530.5  34.1  392   77-484    11-441 (456)
 22 3i3k_A Lanosterol 14-alpha dem 100.0 2.3E-69   8E-74  533.1  28.3  411   38-480    10-450 (461)
 23 3dax_A Cytochrome P450 7A1; ch 100.0 6.1E-66 2.1E-70  513.1  26.7  419   40-483    14-484 (491)
 24 2cd8_A Cytochrome P450 monooxy 100.0 5.3E-65 1.8E-69  495.9  31.9  385   38-484    25-428 (436)
 25 3v8d_A Cholesterol 7-alpha-mon 100.0 2.2E-65 7.4E-70  508.7  24.8  417   39-482    13-483 (491)
 26 3b6h_A Prostacyclin synthase;  100.0   4E-64 1.4E-68  500.6  31.0  414   40-484    19-489 (498)
 27 3b98_A Prostaglandin I2 syntha 100.0 8.5E-65 2.9E-69  502.8  24.0  412   40-484    19-470 (475)
 28 1n97_A CYP175A1; electron tran 100.0 4.9E-65 1.7E-69  489.8  19.9  379   43-484     3-386 (389)
 29 1izo_A P450bsbeta, cytochrome  100.0 1.1E-62 3.7E-67  478.4  34.4  380   48-484     9-415 (417)
 30 3awm_A Fatty acid alpha-hydrox 100.0 2.2E-62 7.6E-67  475.9  33.0  383   40-483     3-412 (415)
 31 2jjn_A Cytochrome P450 113A1;  100.0 2.3E-62 7.9E-67  474.5  27.4  383   16-484     4-406 (411)
 32 1jfb_A Nitric-oxide reductase  100.0 5.1E-61 1.8E-65  464.7  33.0  374   41-480     3-403 (404)
 33 1ued_A P450 OXYC, P450 monooxy 100.0 1.4E-61 4.8E-66  468.0  28.0  371   40-481    11-406 (406)
 34 3ejb_B Biotin biosynthesis cyt 100.0 4.2E-61 1.4E-65  465.2  29.3  360   76-484    13-396 (404)
 35 3a4g_A Vitamin D hydroxylase;  100.0 1.3E-60 4.5E-65  461.3  31.8  364   75-484    19-401 (411)
 36 1s1f_A Putative cytochrome P45 100.0 2.6E-60 8.9E-65  459.1  33.2  376   39-482     8-405 (406)
 37 3aba_A Cytochrome P450; oxidor 100.0 2.1E-60   7E-65  459.3  32.0  366   76-484    19-402 (403)
 38 1cpt_A Cytochrome P450-TERP; o 100.0   5E-61 1.7E-65  467.7  27.2  364   77-484    26-428 (428)
 39 3dsk_A Cytochrome P450 74A, ch 100.0 1.1E-60 3.9E-65  475.4  29.6  396   40-460    29-472 (495)
 40 1gwi_A CYP154C1, cytochrome P4 100.0 4.9E-61 1.7E-65  464.6  25.8  368   76-484    17-409 (411)
 41 2uuq_A CYP130, cytochrome P450 100.0   1E-60 3.4E-65  462.6  27.1  367   75-484    24-413 (414)
 42 3nc3_A Cytochrome P450 CYPX; c 100.0 4.7E-61 1.6E-65  468.5  24.6  373   75-483    52-440 (441)
 43 2zwu_A Camphor 5-monooxygenase 100.0 6.6E-61 2.3E-65  463.7  24.6  378   38-484    10-410 (415)
 44 2zbx_A Cytochrome P450-SU1; be 100.0 9.4E-60 3.2E-64  456.1  32.2  382   40-482     6-407 (412)
 45 2xkr_A CYP142, putative cytoch 100.0 5.1E-60 1.7E-64  456.3  29.7  359   76-484    18-394 (398)
 46 2dkk_A Cytochrome P450; CYP158 100.0 3.7E-60 1.3E-64  457.9  28.7  363   77-484    28-410 (411)
 47 3abb_A CYP105D6, cytochrome P4 100.0   4E-60 1.4E-64  458.3  28.8  365   74-484    22-407 (408)
 48 1z8o_A 6-deoxyerythronolide B  100.0 9.3E-60 3.2E-64  455.2  30.6  357   74-482    12-403 (404)
 49 4fb2_A P450CIN; heme, monooxyg 100.0 1.3E-60 4.3E-65  460.5  24.3  367   73-484    16-393 (398)
 50 1odo_A Putative cytochrome P45 100.0   5E-60 1.7E-64  457.7  28.1  368   76-483    15-407 (408)
 51 3buj_A CALO2; heme, iron, meta 100.0 4.2E-60 1.4E-64  456.8  27.0  355   76-484    13-396 (397)
 52 2y5n_A MYCG, P-450-like protei 100.0   2E-59 6.8E-64  453.6  30.9  358   74-481    35-417 (417)
 53 3dan_A Cytochrome P450 74A2; A 100.0 8.5E-60 2.9E-64  466.7  28.1  396   40-460    10-454 (473)
 54 2z3t_A Cytochrome P450; monoxy 100.0 9.2E-60 3.2E-64  457.4  27.2  358   77-483    21-415 (425)
 55 1q5d_A P450 epoxidase; cytochr 100.0 1.1E-59 3.6E-64  456.7  27.6  362   74-484    24-416 (419)
 56 2z36_A MOXA, cytochrome P450 t 100.0 1.1E-58 3.6E-63  448.3  33.3  366   75-482    21-408 (413)
 57 2xbk_A PIMD protein; epoxidati 100.0 6.4E-59 2.2E-63  447.8  31.5  360   74-481    24-404 (404)
 58 3ivy_A Cytochrome P450 CYP125; 100.0 1.2E-59   4E-64  458.2  25.2  353   77-484    38-428 (433)
 59 3mgx_A Putative P450 monooxyge 100.0 1.5E-59 5.1E-64  453.9  25.4  356   76-484    37-415 (415)
 60 2wm5_A CYP124, putative cytoch 100.0 1.3E-58 4.4E-63  450.4  31.4  361   77-482    45-435 (435)
 61 1n40_A P450 MT2, cytochrome P4 100.0 3.6E-59 1.2E-63  449.6  27.1  357   74-481    14-396 (396)
 62 3tkt_A Cytochrome P450; aromat 100.0 1.5E-58 5.2E-63  452.3  29.2  362   78-483    47-449 (450)
 63 3oft_A Cytochrome P450, CYP101 100.0 3.1E-59 1.1E-63  450.9  24.1  366   73-482    21-395 (396)
 64 3r9b_A Cytochrome P450 164A2;  100.0 1.2E-58   4E-63  450.2  27.6  363   73-484    26-417 (418)
 65 3rwl_A Cytochrome P450 alkane  100.0 4.1E-58 1.4E-62  445.7  31.4  359   76-483    38-426 (426)
 66 3tyw_A Putative cytochrome P45 100.0 3.8E-58 1.3E-62  445.8  30.9  343   75-460    28-389 (417)
 67 3lxh_A Cytochrome P450; heme,  100.0 2.2E-58 7.5E-63  448.0  26.2  361   73-484    35-417 (421)
 68 3oo3_A OXY protein; cytochrome 100.0 1.9E-57 6.4E-62  436.7  31.4  361   73-481     9-384 (384)
 69 1lfk_A OXYB, P450 monooxygenas 100.0 5.6E-58 1.9E-62  441.8  24.1  360   77-481    14-398 (398)
 70 1io7_A Cytochrome P450 CYP119; 100.0 1.3E-57 4.4E-62  434.6  24.3  341   79-484     2-367 (368)
 71 3b4x_A 367AA long hypothetical 100.0 1.1E-56 3.6E-61  427.6  26.4  336   79-483     2-366 (367)
 72 2wiy_A XPLA-heme, cytochrome P 100.0 1.5E-56 5.2E-61  430.7  26.6  352   77-481    21-393 (394)
 73 3p3o_A Cytochrome P450; monoox 100.0   2E-56 6.9E-61  433.0  24.1  359   72-483    29-415 (416)
 74 4dnj_A Putative cytochrome P45 100.0 7.7E-56 2.6E-60  427.8  27.8  361   76-483    34-411 (412)
 75 2rfb_A Cytochrome P450; heme,  100.0 2.4E-56 8.3E-61  421.6  21.7  328   87-479     2-342 (343)
 76 4dxy_A Cytochrome P450, CYP101 100.0 2.7E-50 9.4E-55  388.1  24.8  356   76-482    37-414 (417)
 77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 7.4E-49 2.5E-53  369.6   5.2  335   40-481    35-381 (381)
 78 2l9u_A Receptor tyrosine-prote  52.8      15 0.00053   19.9   2.8   16    2-17      9-24  (40)
 79 1m46_B IQ4, IQ4 motif from MYO  22.9      62  0.0021   15.6   1.9   12  314-325     8-19  (26)
 80 3bej_E Nuclear receptor coacti  21.7      87   0.003   15.5   2.5   22  432-453     1-22  (26)

No 1  
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00  E-value=3.7e-76  Score=585.80  Aligned_cols=425  Identities=25%  Similarity=0.437  Sum_probs=342.6

Q ss_pred             HHhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHH
Q 046539           36 LRQQGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREIL  115 (484)
Q Consensus        36 ~~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl  115 (484)
                      .|+++||||+++|++||++++.+                  +++.++.+|+++||+||++++|+.++|+++||+++++++
T Consensus        11 ~k~~~~PGP~~~PliGn~~~~~~------------------~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il   72 (485)
T 3nxu_A           11 FKKLGIPGPTPLPFLGNILSYHK------------------GFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVL   72 (485)
T ss_dssp             HHHHTCCCCCCBTTTBTGGGGGG------------------CHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHH
T ss_pred             HhhCCCCCCCCcCeecCcHHhhc------------------ChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHH
Confidence            45568999999999999998743                  466788999999999999999999999999999999999


Q ss_pred             hhC-C-cccCCCCCccccccccceeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 046539          116 LKH-D-IFQKPKGNSLGKLVVNGMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELD  193 (484)
Q Consensus       116 ~~~-~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vd  193 (484)
                      .++ . .|..++.......++.++++.+|+.|+++|+++++.|+.++++.+++.+.+.++.+++.+.+...   .+.++|
T Consensus        73 ~~~~~~~f~~r~~~~~~~~~~~~l~~~~g~~w~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~---~g~~~d  149 (485)
T 3nxu_A           73 VKECYSVFTNRRPFGPVGFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAE---TGKPVT  149 (485)
T ss_dssp             TTTTTTTCCCCCCCSCCGGGGGSTTTCCHHHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HTCCEE
T ss_pred             hccchhhccCCcccccccccccCccccCCcHHHHHHhhcChhcCHHHHHHHHHHHHHHHHHHHHHHHHHhc---cCCcCc
Confidence            876 3 56655544434466788888999999999999999999999999999999999999999986543   345799


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCccch----hHHHHHHHHHHHHHHh---hhcccccchh----------------H-----
Q 046539          194 IWPHIQALAADVISRTAFGSNYDDG----RKIFELIREQSHLFIE---VSQFDYIPGW----------------R-----  245 (484)
Q Consensus       194 l~~~~~~~~~~~i~~~~fG~~~~~~----~~~~~~~~~~~~~~~~---~~~~~~~p~~----------------~-----  245 (484)
                      +.+++..+++|+++.++||.+++..    +.+.............   ......+|.+                .     
T Consensus       150 ~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~  229 (485)
T 3nxu_A          150 LKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRK  229 (485)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCCCCGGGCTTCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhchHHHHHHHHH
Confidence            9999999999999999999987642    2222222111100000   0000001110                0     


Q ss_pred             --HHHH----HhccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHH
Q 046539          246 --EEAL----RIGKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERA  319 (484)
Q Consensus       246 --~~~~----~~~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l  319 (484)
                        .+..    +.......|+++.+++...++..+.+..++++++.+++..+++||+|||+++++|++++|++||++|+++
T Consensus       230 ~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl  309 (485)
T 3nxu_A          230 SVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKL  309 (485)
T ss_dssp             HHHHHHHHHHHCC---CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred             HHHHHHHHHHhccCCCcccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHH
Confidence              1111    1122245689999987654332223456999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhC-CCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCCeEEechhhhhcCCCCccCC
Q 046539          320 RQEVFQVLG-NKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDD  398 (484)
Q Consensus       320 ~~Ei~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~  398 (484)
                      ++|++++++ ++.++++++++|||++|||+|+||++|+++.++|++++|++++||.|||||.|.++.+++||||++| +|
T Consensus       310 ~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~Gt~V~~~~~~~~~d~~~~-~d  388 (485)
T 3nxu_A          310 QEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYW-TE  388 (485)
T ss_dssp             HHHHHHHSTTTCCCCHHHHHHCHHHHHHHHHHHHHSCSCSCEEEECCSCEEETTEEECTTCEEEECHHHHHTCTTTC-SS
T ss_pred             HHHHHHHhccCCCCCHHHHhcChHHHHHHHHHHhcCCCccCcceeeCCCeeECCEEECCCCEEEEchHHhcCChhhc-CC
Confidence            999999998 5678999999999999999999999999999999999999999999999999999999999999999 99


Q ss_pred             CCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcc--cCCCCcceeccCCC
Q 046539          399 AKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYV--HAPSSGITVYPQHG  476 (484)
Q Consensus       399 p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~  476 (484)
                      |++|+||||+++++.. .++ ..++|||.|+|.|+|++||++|++++++.|+++|+|+++++..  .....+.++.|+.+
T Consensus       389 p~~F~PeR~l~~~~~~-~~~-~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~  466 (485)
T 3nxu_A          389 PEKFLPERFSKKNKDN-IDP-YIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKP  466 (485)
T ss_dssp             TTSCCGGGGSHHHHTT-SCT-TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCCSSCCBCSSSSCCBSSC
T ss_pred             ccCcCccccCCCcccc-CCC-CCccCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCCcccCCCeeccCCCC
Confidence            9999999999754322 223 6799999999999999999999999999999999999886532  22344667889999


Q ss_pred             cceeeecC
Q 046539          477 AHMILNKL  484 (484)
Q Consensus       477 ~~v~~~~~  484 (484)
                      ++|++++|
T Consensus       467 ~~~~~~~r  474 (485)
T 3nxu_A          467 VVLKVESR  474 (485)
T ss_dssp             CEEEEEEC
T ss_pred             eEEEEEEc
Confidence            99999987


No 2  
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00  E-value=3.7e-75  Score=578.39  Aligned_cols=426  Identities=19%  Similarity=0.294  Sum_probs=344.7

Q ss_pred             HHHHHHhcchHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCC
Q 046539           20 KILNWAWLKPKKLENFLRQQGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGP   99 (484)
Q Consensus        20 ~~~~~~~~~p~~~~~~~~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~   99 (484)
                      .++++.+.+|++        .+|||+++|++||++++...             ...++++.++.+|+++||+||++++|+
T Consensus        13 ~~~~~~~~~pl~--------~~PGP~~~p~iG~~~~~~~~-------------~~~~~~~~~~~~l~~~YG~i~~~~~g~   71 (482)
T 3k9v_A           13 PLMTDGETRNVT--------DLPGPTNWPLLGSLLEIFWK-------------GGLKKQHDTLAEYHKKYGQIFRMKLGS   71 (482)
T ss_dssp             ------CCEEGG--------GCCCSCCCTTTBTHHHHHHT-------------TCGGGHHHHHHHHHHHHCSEEEEEETT
T ss_pred             ccccccccCCCC--------CCCCCCCCCccccHHHHhcc-------------CCcccHHHHHHHHHHHcCCEEEEccCC
Confidence            445778899998        89999999999999988641             112356789999999999999999999


Q ss_pred             cCeEEeCCHHHHHHHHhhCCcccCCCCCc----cccc--cccceeecCCcchhHHHhhhccCC-ChHHHhhhHHHHHHHH
Q 046539          100 RPSINVQDPKLIREILLKHDIFQKPKGNS----LGKL--VVNGMVTYEGEQWSKVRKIANPAF-HQDKLKDMLPKMYLSC  172 (484)
Q Consensus       100 ~~~vvv~dp~~i~~vl~~~~~~~~~~~~~----~~~~--~g~~~~~~~~~~~~~~R~~~~~~f-~~~~l~~~~~~i~~~~  172 (484)
                      .+.|+++||+++++|+.++..|.+++...    ....  .+.++++.+|+.|+++|+++.+.| +...++.+++.+.+++
T Consensus        72 ~~~vvv~dp~~~~~il~~~~~~~~r~~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~i~~~~  151 (482)
T 3k9v_A           72 FDSVHLGSPSLLEALYRTESAHPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVL  151 (482)
T ss_dssp             EEEEEECSHHHHHHHHHTCCSSCCCCCCHHHHHHHHHHTCCCCTTTCCHHHHHHHHHHHHHHHTCHHHHGGGHHHHHHHH
T ss_pred             CCEEEEcCHHHHHHHHHhcCCCCCCCCchHHHHHHHhcCCCCCceeCCCchHHHHHHHhhHHhcChHHHHHHHHHHHHHH
Confidence            99999999999999998866777665432    1111  356788889999999999999986 7888999999999999


Q ss_pred             HHHHHHHHHHHhcCCCCcccchHHHHHHHHHHHHHHHHhCCCccc--------hhHHHHHHHHHHHHHHhhhcccccchh
Q 046539          173 NHMIRKLFEIAASDEESFELDIWPHIQALAADVISRTAFGSNYDD--------GRKIFELIREQSHLFIEVSQFDYIPGW  244 (484)
Q Consensus       173 ~~l~~~l~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~p~~  244 (484)
                      +.+++.+.+..++  ++..+|+.+++..+++|+++.++||.+++.        ..++......+......   ...+|.+
T Consensus       152 ~~l~~~l~~~~~~--~g~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~  226 (482)
T 3k9v_A          152 ADFLERMDELCDE--RGRIPDLYSELNKWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGK---MMVTPVE  226 (482)
T ss_dssp             HHHHHHHHHHCCT--TSCCTTHHHHHHHHHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGG---GSSSCHH
T ss_pred             HHHHHHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHH---HHhhhHH
Confidence            9999999875432  345799999999999999999999987732        12333333333222211   1122210


Q ss_pred             ----------H-----------------HHHHHh-ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccc
Q 046539          245 ----------R-----------------EEALRI-GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQE  296 (484)
Q Consensus       245 ----------~-----------------~~~~~~-~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~  296 (484)
                                .                 ++..+. ......|++..++..         ..++++++.+++.++++||+|
T Consensus       227 ~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d~l~~ll~~---------~~l~~~ei~~~~~~~~~AG~d  297 (482)
T 3k9v_A          227 LHKRLNTKVWQAHTLAWDTIFKSVKPCIDNRLQRYSQQPGADFLCDIYQQ---------DHLSKKELYAAVTELQLAAVE  297 (482)
T ss_dssp             HHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTSCHHHHHHHH---------TCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHhc---------cCCCHHHHHHHHHHHHHhhhh
Confidence                      0                 000111 111234566555542         258999999999999999999


Q ss_pred             cHHHHHHHHHHHHhcChHHHHHHHHHHHHHhC-CCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEe
Q 046539          297 TTASLLVWVLIMLCMHPIWQERARQEVFQVLG-NKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFIL  375 (484)
Q Consensus       297 tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~I  375 (484)
                      ||+++++|++++|++||++|+|+++||+++++ ++.++++++++|||++|||+|+||++|+++.++|++.+|++++||.|
T Consensus       298 Tta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~~g~~i  377 (482)
T 3k9v_A          298 TTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYAL  377 (482)
T ss_dssp             HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCTTCCCCGGGGGGCHHHHHHHHHHHHHSCSCCEEEEECSSCEEETTEEE
T ss_pred             hHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhhCHHHHHHHHHHhhcCCCCcCcccccCCceeeCCEEE
Confidence            99999999999999999999999999999998 56789999999999999999999999999998999999999999999


Q ss_pred             CCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEE
Q 046539          376 PPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSF  455 (484)
Q Consensus       376 p~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~  455 (484)
                      ||||.|.++.+++||||++| +||++|+||||++.++.  . ....++|||.|+|.|+|++||++|++++++.|+++|++
T Consensus       378 p~Gt~v~~~~~~~~~d~~~~-~~p~~F~PeRfl~~~~~--~-~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~  453 (482)
T 3k9v_A          378 PKGTVLTLNTQVLGSSEDNF-EDSHKFRPERWLQKEKK--I-NPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDI  453 (482)
T ss_dssp             CTTCEEEEECSGGGGCTTTC-SSTTSCCGGGGTCTTSC--C-CGGGCCTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEE
T ss_pred             CCCCEEEEccccccCCCccC-CCcCccCccccCCCCCC--C-CCccccCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEE
Confidence            99999999999999999999 99999999999986432  2 23789999999999999999999999999999999999


Q ss_pred             EeCCCcccCCCCcceeccCCCcceeeecC
Q 046539          456 QLSPTYVHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       456 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      ++.++.+......++..|+.+++|++++|
T Consensus       454 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~R  482 (482)
T 3k9v_A          454 VATDNEPVEMLHLGILVPSRELPIAFRPR  482 (482)
T ss_dssp             EESCCCCCCEEESSSEEESSSCCEEEEEC
T ss_pred             eccCCCCcccccceeecCCCCcceEEeeC
Confidence            98876555445567889999999999998


No 3  
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00  E-value=4.6e-74  Score=563.06  Aligned_cols=421  Identities=23%  Similarity=0.308  Sum_probs=338.1

Q ss_pred             HHHHHhcchHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCc
Q 046539           21 ILNWAWLKPKKLENFLRQQGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPR  100 (484)
Q Consensus        21 ~~~~~~~~p~~~~~~~~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~  100 (484)
                      ++|..|+++.+        .+|||+++|++||+..+..                  +++ ++.+++++||+||++++++.
T Consensus         2 ~~yp~~~~~~~--------~pPgp~~~P~iG~~~~~~~------------------~~~-~~~~~~~~yg~v~~~~~~g~   54 (444)
T 2ve3_A            2 ITSPTNLNSLP--------IPPGDFGLPWLGETLNFLN------------------DGD-FGKKRQQQFGPIFKTRLFGK   54 (444)
T ss_dssp             -------CCCC--------CCCCCCCBTTTBTHHHHHH------------------CTT-HHHHHHHHHCSSEEEEETTE
T ss_pred             ccCCCCCCCCC--------CCCCCCCCCccccHHHHhc------------------CcH-HHHHHHHHcCCeEEEeeCCC
Confidence            35666777665        7999999999999998864                  445 78899999999999998888


Q ss_pred             CeEEeCCHHHHHHHHhhCC-cccCCCCCcccccccc-ceeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHH
Q 046539          101 PSINVQDPKLIREILLKHD-IFQKPKGNSLGKLVVN-GMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRK  178 (484)
Q Consensus       101 ~~vvv~dp~~i~~vl~~~~-~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~  178 (484)
                      +.++++||+++++++.++. .|+.........++|. ++++.+|+.|+++|+++.+.|++++++.+.+.+.++++++++.
T Consensus        55 ~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~~~g~~~l~~~~g~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~  134 (444)
T 2ve3_A           55 NVIFISGALANRFLFTKEQETFQATWPLSTRILLGPNALATQMGEIHRSRRKILYQAFLPRTLDSYLPKMDGIVQGYLEQ  134 (444)
T ss_dssp             EEEEECSHHHHHHHTSSCTTTEEEECCHHHHHHHCTTSGGGCCHHHHHHHHHHHHGGGCHHHHHTTHHHHHHHHHHHHHH
T ss_pred             CEEEEcCHHHHHHHHhCCCcccccchhHHHHHHhCccccccCCchHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHH
Confidence            8999999999999998775 4653221123344565 7888899999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCcccchHHHHHHHHHHHHHHHHhCCCccc-hhHHHHHHHHHHHHHHhhhcccccchh--H----------
Q 046539          179 LFEIAASDEESFELDIWPHIQALAADVISRTAFGSNYDD-GRKIFELIREQSHLFIEVSQFDYIPGW--R----------  245 (484)
Q Consensus       179 l~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~--~----------  245 (484)
                      |.+       ++.+|+.+++..+++++++.++|| .... ..++...+.........  ....+|..  .          
T Consensus       135 l~~-------~~~vd~~~~~~~~~~~vi~~~~fG-~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~~~~~~~  204 (444)
T 2ve3_A          135 WGK-------ANEVIWYPQLRRMTFDVAATLFMG-EKVSQNPQLFPWFETYIQGLFS--LPIPLPNTLFGKSQRARALLL  204 (444)
T ss_dssp             HHH-------SSEEEHHHHHHHHHHHHHHHHHTC-HHHHSCTTHHHHHHHHHHHHSS--CCCCSTTSHHHHHHHHHHHHH
T ss_pred             hcC-------CCcEeHHHHHHHHHHHHHHHHHcC-CCcccHHHHHHHHHHHHHHHhc--CCccCCCcHHHHHHHHHHHHH
Confidence            852       347999999999999999999999 2211 13333333332221111  11223321  1          


Q ss_pred             ---HHHHHh---ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHH
Q 046539          246 ---EEALRI---GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERA  319 (484)
Q Consensus       246 ---~~~~~~---~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l  319 (484)
                         .+.+++   .....+|+++.+++...++    +..++++++.+++..+++||+|||+++++|++++|++||++|+++
T Consensus       205 ~~~~~~i~~r~~~~~~~~d~l~~ll~~~~~~----~~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l  280 (444)
T 2ve3_A          205 AELEKIIKARQQQPPSEEDALGILLAARDDN----NQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERV  280 (444)
T ss_dssp             HHHHHHHHHHHTSCCCCSSHHHHHHHCBCTT----SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCccCHHHHHHhccccC----CCCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHH
Confidence               111111   1124578999998764321    345899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCC
Q 046539          320 RQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDA  399 (484)
Q Consensus       320 ~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p  399 (484)
                      ++|+++++++..++++++++||||+|||+|+||++|+++.++|.+++|++++||.||||+.|.++.+++||||++| +||
T Consensus       281 ~~Ei~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP  359 (444)
T 2ve3_A          281 RQEQNKLQLSQELTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLY-PDP  359 (444)
T ss_dssp             HHHHHSSCCSSCCCHHHHTTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTS-SST
T ss_pred             HHHHHHhccCCCCChhhhhcChHHHHHHHHHHhcCCCccCccceeCCCeeECCEEECCCCEEEechHHhcCChhhc-CCc
Confidence            9999999987789999999999999999999999999999889999999999999999999999999999999999 999


Q ss_pred             CCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCCCCcceeccCCCcce
Q 046539          400 KAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAPSSGITVYPQHGAHM  479 (484)
Q Consensus       400 ~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v  479 (484)
                      ++|+||||++....... ....++|||.|+|.|+|++||++|++++++.|+++|++++.++.......+.+++|.++++|
T Consensus       360 ~~F~PeR~l~~~~~~~~-~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~l~v  438 (444)
T 2ve3_A          360 EKFDPERFTPDGSATHN-PPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLELVVTPSPRPKDNLRV  438 (444)
T ss_dssp             TSCCGGGSSTTSTTTTS-CTTSCCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEEECSSCCCCEEESSSEEETTCCEE
T ss_pred             CccCccccCCCCcccCC-CCceeeCCCCCCccCccHHHHHHHHHHHHHHHHHhCEEEeCCCCCcceeccccccCCCCceE
Confidence            99999999975332112 22569999999999999999999999999999999999998764433344567889999999


Q ss_pred             eeecC
Q 046539          480 ILNKL  484 (484)
Q Consensus       480 ~~~~~  484 (484)
                      ++++|
T Consensus       439 ~~~~r  443 (444)
T 2ve3_A          439 KLHSL  443 (444)
T ss_dssp             EEEEC
T ss_pred             EEEeC
Confidence            99987


No 4  
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00  E-value=7.7e-74  Score=568.45  Aligned_cols=420  Identities=18%  Similarity=0.260  Sum_probs=323.8

Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhC
Q 046539           39 QGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKH  118 (484)
Q Consensus        39 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~  118 (484)
                      +.||||+++|++||++++..                 ++++..+.+|+++|||||++++|+.++|+|+||++++++|.++
T Consensus        10 kLPPGP~~lP~iGn~~~~~~-----------------~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~   72 (479)
T 3tbg_A           10 KLPPGPLPLPGLGNLLHVDF-----------------QNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTH   72 (479)
T ss_dssp             CCCCCSCCBTTTBTGGGCCT-----------------TSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTT
T ss_pred             CCCCCCCCcCcccchHhhcC-----------------CCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhC
Confidence            46899999999999987632                 2567789999999999999999999999999999999999876


Q ss_pred             C-cccCCCCCcccccc-----ccce-eecCCcchhHHHhhhccCCChHHHh--hhHHHHHHHHHHHHHHHHHHHhcCCCC
Q 046539          119 D-IFQKPKGNSLGKLV-----VNGM-VTYEGEQWSKVRKIANPAFHQDKLK--DMLPKMYLSCNHMIRKLFEIAASDEES  189 (484)
Q Consensus       119 ~-~~~~~~~~~~~~~~-----g~~~-~~~~~~~~~~~R~~~~~~f~~~~l~--~~~~~i~~~~~~l~~~l~~~~~~~~~~  189 (484)
                      + .|+.++.......+     +.++ +..+|+.|+++|+++.+.|+...+.  .+++.+......+...+...     .+
T Consensus        73 ~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~  147 (479)
T 3tbg_A           73 GEDTADRPPVPITQILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANH-----SG  147 (479)
T ss_dssp             GGGSCBCCCCGGGGGGTCBTTBCCSTTCCSSHHHHHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHHHHHHTT-----TT
T ss_pred             ChhhcCCCchHHHHHhccCCCCCceeeCCCCHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHhc-----cC
Confidence            6 67655543322222     3344 4467999999999999988776653  34555666666665555432     45


Q ss_pred             cccchHHHHHHHHHHHHHHHHhCCCccchhHHHH-HHHHHHHHHHhh-----------hcccccchhH------------
Q 046539          190 FELDIWPHIQALAADVISRTAFGSNYDDGRKIFE-LIREQSHLFIEV-----------SQFDYIPGWR------------  245 (484)
Q Consensus       190 ~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~-~~~~~~~~~~~~-----------~~~~~~p~~~------------  245 (484)
                      ..+|+..++..+++++++.++||..+...+.... ............           .....++.+.            
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (479)
T 3tbg_A          148 RPFRPNGLLDKAVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIPALAGKVLRFQKAFLT  227 (479)
T ss_dssp             CCBCTHHHHHHHHHHHHHHHHHSCCCCTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGSHHHHHHHTHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHHHhhcCCcccccchhhhhhhhhhhhhhhhhhhhhhhhhcccchhccchhhHHHHHHHHHHHHH
Confidence            6799999999999999999999998765432211 111111111000           0001111111            


Q ss_pred             --HH----HHHh--ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHH
Q 046539          246 --EE----ALRI--GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQE  317 (484)
Q Consensus       246 --~~----~~~~--~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~  317 (484)
                        .+    ..+.  ......|+++.++........+....++++++.+++.++++||+|||+++++|++++|++||++|+
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~  307 (479)
T 3tbg_A          228 QLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQR  307 (479)
T ss_dssp             HHHHHHHHHHHHCCTTSCCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred             HHHHHHHHHHHhhhcccccchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHH
Confidence              00    1111  112345666666544333222345579999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhC-CCCCChhhhccChhHHHHHHHhhcCCCCccc-ccccccccceecCEEeCCCCeEEechhhhhcCCCCc
Q 046539          318 RARQEVFQVLG-NKEPKFDELNRLKMVGKIIYEVFRIYSPAYL-IFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYW  395 (484)
Q Consensus       318 ~l~~Ei~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~  395 (484)
                      |+++|++++++ ++.++.+++++|||++|||+||||++|+++. ..|.+.+|++++||.|||||.|.++.+++||||++|
T Consensus       308 kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~  387 (479)
T 3tbg_A          308 RVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVW  387 (479)
T ss_dssp             HHHHHHHHHTCSSSCCCHHHHTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTS
T ss_pred             HHHHHHHHHHhhccccchhhhccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhC
Confidence            99999999987 6788999999999999999999999999998 555678999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCC---CCcceec
Q 046539          396 GDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAP---SSGITVY  472 (484)
Q Consensus       396 g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~---~~~~~~~  472 (484)
                       +||++|+||||++.++.. .++ .+|+|||+|+|.|+|++||++|++++++.||++|+|+++++.+...   ..+++..
T Consensus       388 -~dP~~F~PeRfl~~~~~~-~~~-~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  464 (479)
T 3tbg_A          388 -EKPFRFHPEHFLDAQGHF-VKP-EAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVS  464 (479)
T ss_dssp             -SSTTSCCGGGGBCTTCCB-CCC-TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSCCCCSCEEESSSEE
T ss_pred             -CCccccCccccCCCCccc-CCC-CceecCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCCCccccccceeeec
Confidence             999999999999865432 223 7899999999999999999999999999999999999987643322   2356667


Q ss_pred             cCCCcceeeecC
Q 046539          473 PQHGAHMILNKL  484 (484)
Q Consensus       473 ~~~~~~v~~~~~  484 (484)
                      |+ +++|+++||
T Consensus       465 P~-~~~v~~~pR  475 (479)
T 3tbg_A          465 PS-PYELCAVPR  475 (479)
T ss_dssp             EC-CCCBEEEEC
T ss_pred             CC-CeEEEEEEC
Confidence            75 799999998


No 5  
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00  E-value=2.4e-74  Score=568.31  Aligned_cols=414  Identities=18%  Similarity=0.292  Sum_probs=339.7

Q ss_pred             cCCCCCCC-CCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhh
Q 046539           39 QGFSGNSY-KIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLK  117 (484)
Q Consensus        39 ~~~Pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~  117 (484)
                      +.||||++ +|++||++++.+                  +++.++.++++||||||++++++.++|+|+||+++++++.+
T Consensus        11 ~~PP~~~~~lP~iG~~~~~~~------------------~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~   72 (461)
T 3ld6_A           11 KSPPYIFSPIPFLGHAIAFGK------------------SPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNS   72 (461)
T ss_dssp             CCCCBCCCSSTTTBTHHHHHH------------------CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHC
T ss_pred             CCCCCCCCCcCeeeeHHHhhh------------------CHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhC
Confidence            35677765 899999999875                  67889999999999999999999999999999999999987


Q ss_pred             CC-cccCCCCCc--ccccccccee-ecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 046539          118 HD-IFQKPKGNS--LGKLVVNGMV-TYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELD  193 (484)
Q Consensus       118 ~~-~~~~~~~~~--~~~~~g~~~~-~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vd  193 (484)
                      ++ .+++++...  ...++|.+++ ..+|+.|+++|+++.+.|+...++++.+.+.+.++++++.|.       ....+|
T Consensus        73 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~~~~~~~-------~~~~~~  145 (461)
T 3ld6_A           73 KNEDLNAEDVYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEYFESWG-------ESGEKN  145 (461)
T ss_dssp             CTTTEESHHHHHHHHHHHHCTTSGGGSCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHGGGGC-------SEEEEE
T ss_pred             CccccCCCcchhhhhhccCCCccccCCCcHHHHHHHHhccccccHHHHhhhhHHHHHHHHHHHHHHh-------hcCCcc
Confidence            66 666655433  4456677765 468999999999999999999999999999999999988875       445789


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCccch--hHHHHHHHHHHHHHHhhh--cccccc--hhH-------------HHHHH---h
Q 046539          194 IWPHIQALAADVISRTAFGSNYDDG--RKIFELIREQSHLFIEVS--QFDYIP--GWR-------------EEALR---I  251 (484)
Q Consensus       194 l~~~~~~~~~~~i~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~p--~~~-------------~~~~~---~  251 (484)
                      +.+.+..+++++++.++||.++.+.  ++.......+...+....  ...++|  .+.             .+.++   .
T Consensus       146 ~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~  225 (461)
T 3ld6_A          146 VFEALSELIILTASHCLHGKEIRSQLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQ  225 (461)
T ss_dssp             HHHHHHHHHHHHHHHHHTCHHHHHTCCHHHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHcCcchhhhhhhhhhhhhhhhhhhhhhHHHhhhhhccCcHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999865432  233333332222211111  111222  111             11111   1


Q ss_pred             ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCC--
Q 046539          252 GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGN--  329 (484)
Q Consensus       252 ~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~--  329 (484)
                      .....+|+++.+++...++    +..++++++++++..+++||+|||+++++|++++|++||++|+++++|+++++++  
T Consensus       226 ~~~~~~d~l~~ll~~~~~~----~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~  301 (461)
T 3ld6_A          226 SQEKIDDILQTLLDATYKD----GRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENL  301 (461)
T ss_dssp             CCCCCCSHHHHHHTCBCTT----SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTC
T ss_pred             cCCCCcchhhhhHHhhhcc----cCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhcccc
Confidence            2234678999998765543    4469999999999999999999999999999999999999999999999999983  


Q ss_pred             CCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCC
Q 046539          330 KEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSE  409 (484)
Q Consensus       330 ~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~  409 (484)
                      ...+.+++++||||+|||+|+||++|+++...|++++|++++||.||||+.|+++.+++||||++| +||++|+||||++
T Consensus       302 ~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dP~~F~PeRfl~  380 (461)
T 3ld6_A          302 PPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSW-VERLDFNPDRYLQ  380 (461)
T ss_dssp             CCCCHHHHHTCHHHHHHHHHHHHHSCSCCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTC-TTTTSCCGGGGGS
T ss_pred             cchhHHHHHHHhhhhheeeeccccCCchhccccccccceeeCCcccCCCCeeeechHhhcCCcccc-CCccccCccccCC
Confidence            456889999999999999999999999999999999999999999999999999999999999999 8999999999998


Q ss_pred             cchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCCCCcceeccCCCcceeeecC
Q 046539          410 GVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       410 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      +++... ++ .+|+|||+|+|.|+|++||++|++++++.|+++|+|+++++..+......++.+.++++|++++|
T Consensus       381 ~~~~~~-~~-~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~l~~~~~~~~~~~~~~~~p~~~~v~~~~R  453 (461)
T 3ld6_A          381 DNPASG-EK-FAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPENPVIRYKRR  453 (461)
T ss_dssp             CCHHHH-SS-SSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSSCEEEEEEC
T ss_pred             CCcccC-CC-CccccCCCcCcCChhHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcccccceEEcCCceEEEEEEC
Confidence            755432 23 68999999999999999999999999999999999999887554443344455556899999998


No 6  
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00  E-value=5.9e-72  Score=555.84  Aligned_cols=418  Identities=17%  Similarity=0.213  Sum_probs=334.8

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCC
Q 046539           40 GFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHD  119 (484)
Q Consensus        40 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~  119 (484)
                      .+|||++.++. +++.+...             ...++++.++.+|+++|||||++++|+.+.|+++||+++++++.+++
T Consensus        10 ~~PGP~~~~~~-~~~~~~~~-------------~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~~   75 (487)
T 3n9y_A           10 EIPSPGDNGWL-NLYHFWRE-------------TGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEG   75 (487)
T ss_dssp             GSCCSCSCHHH-HHHHHHHH-------------TCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTCC
T ss_pred             hCCCCCCCChh-hHHHHHhc-------------CCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhCC
Confidence            79999988765 66665431             01235678899999999999999999999999999999999998766


Q ss_pred             cccCCCCCc-c-----ccccccceeecCCcchhHHHhhhccC-CChHHHhhhHHHHHHHHHHHHHHHHHHHhc-CCCCcc
Q 046539          120 IFQKPKGNS-L-----GKLVVNGMVTYEGEQWSKVRKIANPA-FHQDKLKDMLPKMYLSCNHMIRKLFEIAAS-DEESFE  191 (484)
Q Consensus       120 ~~~~~~~~~-~-----~~~~g~~~~~~~~~~~~~~R~~~~~~-f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~-~~~~~~  191 (484)
                      .|++++... .     ....+.++++.+|+.|+++|+++.+. |+.++++.+.+.+.++++++++.|.+...+ ++++..
T Consensus        76 ~f~~r~~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~  155 (487)
T 3n9y_A           76 PNPERFLIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYS  155 (487)
T ss_dssp             SSCCCCCCHHHHHHHHHTTCCCCGGGCCHHHHHHHHHHHHHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEE
T ss_pred             CCCCCCCCcHHHHHHHHccccCCCccCCcHHHHHHHHhcCcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCC
Confidence            676655332 1     11235678889999999999999995 999999999999999999999999875432 113457


Q ss_pred             cchHHHHHHHHHHHHHHHHhCCCccch-----hHHHHHHHHHHHHHHhhhcccccchh----------H-----------
Q 046539          192 LDIWPHIQALAADVISRTAFGSNYDDG-----RKIFELIREQSHLFIEVSQFDYIPGW----------R-----------  245 (484)
Q Consensus       192 vdl~~~~~~~~~~~i~~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~p~~----------~-----------  245 (484)
                      +|+.+++..+++|+++.++||.+++..     .........+...+........+|.+          .           
T Consensus       156 vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~  235 (487)
T 3n9y_A          156 GDISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFS  235 (487)
T ss_dssp             ECCHHHHHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHGGGTTSCHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHHHHHhcCHHHHhhcccHHHHHHHHHHHHHHH
Confidence            999999999999999999999987421     11111222222222111112223321          0           


Q ss_pred             --HHHH-------Hhcc---CCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcCh
Q 046539          246 --EEAL-------RIGK---ASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHP  313 (484)
Q Consensus       246 --~~~~-------~~~~---~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p  313 (484)
                        .+.+       ....   ....|+++.+++.         +.++++++.+++..+++||+|||+++++|++++|++||
T Consensus       236 ~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~---------~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P  306 (487)
T 3n9y_A          236 KADIYTQNFYWELRQKGSVHHDYRGILYRLLGD---------SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNL  306 (487)
T ss_dssp             HHHHHHHHHHHHHHHHCCCCSSCCCHHHHHHHS---------CSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCH
T ss_pred             HHHHHHHHHHHHHHhcCCcccchHHHHHHHHhc---------CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCh
Confidence              0000       0010   1235677777643         24899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhC-CCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCCeEEechhhhhcCC
Q 046539          314 IWQERARQEVFQVLG-NKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLSLPIILVHHDH  392 (484)
Q Consensus       314 ~~~~~l~~Ei~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~  392 (484)
                      ++|+++++|++++++ .+.++++++++||||+|||+|+||++|+++.++|.+++|++++||.|||||.|.++.+++||||
T Consensus       307 ~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~  386 (487)
T 3n9y_A          307 KVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREP  386 (487)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCHHHHTTSCHHHHHHHHHHHHHSCSSSEEEEECSSCEEETTEEECTTCEEEEEHHHHHTCT
T ss_pred             HHHHHHHHHHHHhhcccccchhhhhhhCHHHHHHHHHHhhhCCcccccceeecCceeeCCEEECCCCEEEeCcHHhcCCc
Confidence            999999999999987 5566799999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCCCCcceec
Q 046539          393 EYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAPSSGITVY  472 (484)
Q Consensus       393 ~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~  472 (484)
                      ++| +||++|+||||++++..  ..+ ..++|||.|+|.|+|++||++|++++++.|+++|+|+++++.+.....+.++.
T Consensus       387 ~~~-~dp~~F~PeR~l~~~~~--~~~-~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  462 (487)
T 3n9y_A          387 TFF-FDPENFDPTRWLSKDKN--ITY-FRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLSDVGTTFNLILM  462 (487)
T ss_dssp             TTS-SSTTSCCGGGGTCSCTT--SST-TTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCCCCCEEESSSEE
T ss_pred             ccC-CCcccCChhhcCCCCCC--CCC-CCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCCcccccceeeeec
Confidence            999 99999999999985432  122 68999999999999999999999999999999999999877544445567889


Q ss_pred             cCCCcceeeecC
Q 046539          473 PQHGAHMILNKL  484 (484)
Q Consensus       473 ~~~~~~v~~~~~  484 (484)
                      |+.+++|+++||
T Consensus       463 p~~~~~~~~~~r  474 (487)
T 3n9y_A          463 PEKPISFTFWPF  474 (487)
T ss_dssp             ESSCCCEEEEEC
T ss_pred             CCCCceeEEEEC
Confidence            999999999987


No 7  
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00  E-value=5.6e-72  Score=558.28  Aligned_cols=413  Identities=20%  Similarity=0.275  Sum_probs=332.7

Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhC
Q 046539           39 QGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKH  118 (484)
Q Consensus        39 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~  118 (484)
                      +.||||+++|++||++++.+...              .+++..+.+|+++||+||++++|+.++|+++||++++++++++
T Consensus        45 ~~pPGP~~~P~iGnl~~~~~~~~--------------~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~~  110 (503)
T 3s79_A           45 SSIPGPGYCMGIGPLISHGRFLW--------------MGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKHN  110 (503)
T ss_dssp             CCCCSCCCCSSSHHHHHHHHHHH--------------HCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHSG
T ss_pred             CCCCCCCCCceeeehhccccccc--------------cchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhcC
Confidence            48999999999999999865321              1344578899999999999999999999999999999999653


Q ss_pred             CcccCCCCCc-cc---ccccccee-ecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 046539          119 DIFQKPKGNS-LG---KLVVNGMV-TYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELD  193 (484)
Q Consensus       119 ~~~~~~~~~~-~~---~~~g~~~~-~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vd  193 (484)
                       .|+.++... ..   ...+.+++ ..+|+.|+++|+++.+.|+..+++++.+.+.++++++++.|.+..+   ++..+|
T Consensus       111 -~~~~r~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~---~~~~vd  186 (503)
T 3s79_A          111 -HYSSRFGSKLGLQCIGMHEKGIIFNNNPELWKTTRPFFMKALSGPGLVRMVTVCAESLKTHLDRLEEVTN---ESGYVD  186 (503)
T ss_dssp             -GGCCCCCCHHHHHHHTCTTSSSTTCCCHHHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHTTGGGTBC---TTSCBC
T ss_pred             -CCCCcchhhhhhhhhccCCCceeeCCCccHHHHHHHhhhHhhChHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCeEc
Confidence             455443322 11   23355654 4679999999999999999999999999999999999988765322   345799


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCccchhHHHHHHHHHHHHHHhhhc----ccccchhH------------------HHHHHh
Q 046539          194 IWPHIQALAADVISRTAFGSNYDDGRKIFELIREQSHLFIEVSQ----FDYIPGWR------------------EEALRI  251 (484)
Q Consensus       194 l~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~p~~~------------------~~~~~~  251 (484)
                      +.+++..+++++++.++||.++++. +......+..........    ...+|+..                  ++..+.
T Consensus       187 l~~~~~~~~~~vi~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  265 (503)
T 3s79_A          187 VLTLLRRVMLDTSNTLFLRIPLDES-AIVVKIQGYFDAWQALLIKPDIFFKISWLYKKYEKSVKDLKDAIEVLIAEKRRR  265 (503)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCCCHH-HHHHHHHHHHHHHHHHTTCCHHHHHSGGGTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCcccCch-hHHHHHHHHHHHHHHHhcCcHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999987643 222222222222111110    01122211                  111111


Q ss_pred             ---cc--CCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 046539          252 ---GK--ASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQV  326 (484)
Q Consensus       252 ---~~--~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~  326 (484)
                         +.  ....|+++.+++...      +++++++++.+++..+++||+|||+++++|++++|++||++|+|+++||+++
T Consensus       266 ~~~~~~~~~~~d~l~~ll~~~~------~~~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~v  339 (503)
T 3s79_A          266 ISTEEKLEECMDFATELILAEK------RGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTV  339 (503)
T ss_dssp             HHTCTTTTTTCCHHHHHHHHHH------TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             hhcccccchHHHHHHHHHHhcc------cCCCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence               11  123489999887642      2368999999999999999999999999999999999999999999999999


Q ss_pred             hCCCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCC
Q 046539          327 LGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDR  406 (484)
Q Consensus       327 ~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R  406 (484)
                      ++++.++++++++|||++|||+|+||++|+++...|++++|++++||.|||||.|.++.+++||| ++| +||++|+|||
T Consensus       340 ~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d-~~~-~dp~~F~PeR  417 (503)
T 3s79_A          340 IGERDIKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFF-PKPNEFTLEN  417 (503)
T ss_dssp             TTTSCCCHHHHTTCHHHHHHHHHHHHHSCSSCCEEEECSSCEEETTEEECTTCEEEECHHHHTTT-SSC-SSTTSCCGGG
T ss_pred             hCCCCCCHHHHhcCHHHHHHHHhhhccCCCcccccccccCCeeECCEEECCCCEEEeehHHhCCC-ccC-CChhhCChhh
Confidence            99888999999999999999999999999999988999999999999999999999999999999 999 9999999999


Q ss_pred             CCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCC---CCcceeccCCC---ccee
Q 046539          407 FSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAP---SSGITVYPQHG---AHMI  480 (484)
Q Consensus       407 ~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~---~~~~~~~~~~~---~~v~  480 (484)
                      |++..      +...|+|||+|+|.|+|++||++|++++++.|+++|+|+++++...++   ..+.+.+|..+   ++|+
T Consensus       418 f~~~~------~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~v~  491 (503)
T 3s79_A          418 FAKNV------PYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNMLEMI  491 (503)
T ss_dssp             GSSCC------CTTTCCSSCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEEESTTCCTTTSCEEESSSEEECTTSCCCCEE
T ss_pred             cCCCC------CcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCCCccccccccceeecCCCccceeeEE
Confidence            99741      226799999999999999999999999999999999999987753332   33677788775   9999


Q ss_pred             eecC
Q 046539          481 LNKL  484 (484)
Q Consensus       481 ~~~~  484 (484)
                      ++||
T Consensus       492 ~~~R  495 (503)
T 3s79_A          492 FTPR  495 (503)
T ss_dssp             EEEC
T ss_pred             eccC
Confidence            9998


No 8  
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00  E-value=1.6e-72  Score=560.63  Aligned_cols=424  Identities=21%  Similarity=0.326  Sum_probs=332.6

Q ss_pred             hcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhh
Q 046539           38 QQGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLK  117 (484)
Q Consensus        38 ~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~  117 (484)
                      .+.||||+++|++||++++.+                .++++..+.+|+++||+||++++|+.++|+|+||+++++++.+
T Consensus         7 ~~~PPgP~~lPliGnl~~l~~----------------~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~   70 (494)
T 3swz_A            7 AKYPKSLLSLPLVGSLPFLPR----------------HGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIK   70 (494)
T ss_dssp             -----CCBCCCEEEEESSCTT----------------SSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTT
T ss_pred             CCCCCCCCCCCeEcchHHhCC----------------CCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHh
Confidence            346899999999999987632                0245678999999999999999999999999999999999988


Q ss_pred             CC-cccCCCCCcccccc---ccceeec-CCcchhHHHhhhccCCCh--HHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 046539          118 HD-IFQKPKGNSLGKLV---VNGMVTY-EGEQWSKVRKIANPAFHQ--DKLKDMLPKMYLSCNHMIRKLFEIAASDEESF  190 (484)
Q Consensus       118 ~~-~~~~~~~~~~~~~~---g~~~~~~-~~~~~~~~R~~~~~~f~~--~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~  190 (484)
                      +. .|+.++.......+   +.++++. +|+.|+++|+++.+.|+.  ..++.+++.+.++++.+++.|.+.     .+.
T Consensus        71 ~~~~f~~rp~~~~~~~~~~~~~gl~~~~~g~~wr~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~-----~~~  145 (494)
T 3swz_A           71 KGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDMLATH-----NGQ  145 (494)
T ss_dssp             TTTTTBBCCCCHHHHHHTTTTCSSSSSCSSHHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHHT-----TTE
T ss_pred             CcHhhCCCCCcHHHHHhccCCCCeEeCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHc-----CCC
Confidence            76 78776654433333   4466665 499999999999999874  456789999999999999988752     456


Q ss_pred             ccchHHHHHHHHHHHHHHHHhCCCccchhHHHHHHHHHHHH----HHhhhcccccchhH---------------------
Q 046539          191 ELDIWPHIQALAADVISRTAFGSNYDDGRKIFELIREQSHL----FIEVSQFDYIPGWR---------------------  245 (484)
Q Consensus       191 ~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~p~~~---------------------  245 (484)
                      .+|+..++..+++|+++.++||.+++..++......++...    ........++|++.                     
T Consensus       146 ~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~~~~~~~~~~~~~~~~~~  225 (494)
T 3swz_A          146 SIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLL  225 (494)
T ss_dssp             EECCHHHHHHHHHHHHHHHHHSCCCCTTCTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCCSHHHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHcCCcCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence            89999999999999999999999876544333333332222    11111122233221                     


Q ss_pred             HHHHHh-----ccCCchhHHHHHHHhhhHhhH------HhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChH
Q 046539          246 EEALRI-----GKASNDDLLGLLMESNYKEIQ------EKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPI  314 (484)
Q Consensus       246 ~~~~~~-----~~~~~~~~l~~ll~~~~~~~~------~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~  314 (484)
                      ...++.     ......|+++.+++...+...      .....++++++..++..+++||+|||+++++|++++|++||+
T Consensus       226 ~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~  305 (494)
T 3swz_A          226 NKILENYKEKFRSDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQ  305 (494)
T ss_dssp             HHHHHHHTTTCCTTCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred             HHHHHHHHHhhcccchhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHH
Confidence            011111     111345899999875432100      012358899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhC-CCCCChhhhccChhHHHHHHHhhcCCCCccc-ccccccccceecCEEeCCCCeEEechhhhhcCC
Q 046539          315 WQERARQEVFQVLG-NKEPKFDELNRLKMVGKIIYEVFRIYSPAYL-IFRTNVEETKLGDFILPPGVLLSLPIILVHHDH  392 (484)
Q Consensus       315 ~~~~l~~Ei~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~  392 (484)
                      +|+|+++||+++++ ++.++++++++|||++|||+|+||++|+++. ++|.+++|++++||.|||||.|+++.+++||||
T Consensus       306 ~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~  385 (494)
T 3swz_A          306 VKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNE  385 (494)
T ss_dssp             HHHHHHHHHHHHTCSSSCCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTEEECTTCEEEECHHHHHHCT
T ss_pred             HHHHHHHHHHHhcCCCCCCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceECCEEeCCCCEEEEehHHhhCCc
Confidence            99999999999998 5678999999999999999999999999998 889999999999999999999999999999999


Q ss_pred             CCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccC---CCCcc
Q 046539          393 EYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHA---PSSGI  469 (484)
Q Consensus       393 ~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~---~~~~~  469 (484)
                      ++| +||++|+||||+++++.....+...|+|||.|+|.|+|++||++|++++++.|+++|+|+++++....   ...+.
T Consensus       386 ~~~-~dp~~F~PeRfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~  464 (494)
T 3swz_A          386 KEW-HQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPKV  464 (494)
T ss_dssp             TTS-SSTTSCCGGGGBCTTSSSBCCCCSCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCCCCCCSCEESS
T ss_pred             ccC-CCcccCCcccccCCCCccccCCCCcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCCCCCCCCccce
Confidence            999 99999999999986543222233689999999999999999999999999999999999987653221   12234


Q ss_pred             eeccCCCcceeeecC
Q 046539          470 TVYPQHGAHMILNKL  484 (484)
Q Consensus       470 ~~~~~~~~~v~~~~~  484 (484)
                      +..| .+++|+++||
T Consensus       465 ~~~p-~~~~v~~~~R  478 (494)
T 3swz_A          465 VFLI-DSFKVKIKVR  478 (494)
T ss_dssp             SEEC-CCCCEEEEEC
T ss_pred             eecC-CCcEEEEEEc
Confidence            4444 6899999997


No 9  
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00  E-value=1e-71  Score=552.72  Aligned_cols=421  Identities=19%  Similarity=0.298  Sum_probs=331.7

Q ss_pred             hcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhh
Q 046539           38 QQGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLK  117 (484)
Q Consensus        38 ~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~  117 (484)
                      .+.||||+++|++||++++..                 .+++.++.+|+++||+||++++|+.++|+++||+++++++.+
T Consensus         9 ~~lpPgP~~~PliG~~~~~~~-----------------~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~   71 (476)
T 3e6i_A            9 GKLPPGPFPLPIIGNLFQLEL-----------------KNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLD   71 (476)
T ss_dssp             -CCCCCCCCBTTTBTGGGCCT-----------------TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHT
T ss_pred             CCCCcCCCCcccccChhhhcc-----------------ccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhc
Confidence            347899999999999987621                 256779999999999999999999999999999999999988


Q ss_pred             CC-cccCCCCCc-cccccccceeecCCcchhHHHhhhccCCChHHH--hhhHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 046539          118 HD-IFQKPKGNS-LGKLVVNGMVTYEGEQWSKVRKIANPAFHQDKL--KDMLPKMYLSCNHMIRKLFEIAASDEESFELD  193 (484)
Q Consensus       118 ~~-~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~R~~~~~~f~~~~l--~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vd  193 (484)
                      +. .|++++... ...+.+.++++.+|+.|+++|++..+.|+...+  ..+++.+.++++.+++.|.+.     .+..+|
T Consensus        72 ~~~~f~~r~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~-----~~~~~d  146 (476)
T 3e6i_A           72 YKDEFSGRGDLPAFHAHRDRGIIFNNGPTWKDIRRFSLTTLRNYGMGKQGNESRIQREAHFLLEALRKT-----QGQPFD  146 (476)
T ss_dssp             STTTTCEECCCGGGGGGTTSSSTTCCSTTHHHHHHHHHHHHHHTC-CCSHHHHHHHHHHHHHHHHHHTT-----TTSCBC
T ss_pred             chHhhCCCCCCchhheecCCCEEecCCcHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHh-----CCCCcC
Confidence            75 676655433 445555588889999999999988877765433  346789999999999998742     345799


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCccchh-HHHHHHHHHHHHHHhh-----h-------cccccchhH--------------H
Q 046539          194 IWPHIQALAADVISRTAFGSNYDDGR-KIFELIREQSHLFIEV-----S-------QFDYIPGWR--------------E  246 (484)
Q Consensus       194 l~~~~~~~~~~~i~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~-----~-------~~~~~p~~~--------------~  246 (484)
                      +..++..+++|+++.++||.+++..+ +.......+...+...     .       ...++|...              .
T Consensus       147 ~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp~~~~~~~~~~~~~~~~~~  226 (476)
T 3e6i_A          147 PTFLIGCAPCNVIADILFRKHFDYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVS  226 (476)
T ss_dssp             THHHHTHHHHHHHHHHHHSCCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSCSHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999876432 2222222221111100     0       111233211              1


Q ss_pred             H----HHHh-ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHH
Q 046539          247 E----ALRI-GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQ  321 (484)
Q Consensus       247 ~----~~~~-~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~  321 (484)
                      +    ..+. ......|+++.++....++..+.+..++++++.+++..+++||+|||+++++|++++|++||++|+++++
T Consensus       227 ~~i~~~~~~~~~~~~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~  306 (476)
T 3e6i_A          227 ERVKEHHQSLDPNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHE  306 (476)
T ss_dssp             HHHHHHHHTCCTTSCCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             HHHHHHhhcCCCCCCccHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            1    1111 1112468888888754332111234589999999999999999999999999999999999999999999


Q ss_pred             HHHHHhC-CCCCChhhhccChhHHHHHHHhhcCCCCccc-ccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCC
Q 046539          322 EVFQVLG-NKEPKFDELNRLKMVGKIIYEVFRIYSPAYL-IFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDA  399 (484)
Q Consensus       322 Ei~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p  399 (484)
                      ||+++++ +..++++++++||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|.++.+++||||++| +||
T Consensus       307 Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~~p  385 (476)
T 3e6i_A          307 EIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEF-PDP  385 (476)
T ss_dssp             HHHHHTTTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTS-SST
T ss_pred             HHHHhcCCCCCCChhhccCCchHHHHHHHHHHhccCCCccccccCCCCeeEcCEEeCCCCEEEechHHhhCCcccC-CCc
Confidence            9999998 6678999999999999999999999999996 889999999999999999999999999999999999 999


Q ss_pred             CCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCc-c--cCCC-CcceeccCC
Q 046539          400 KAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTY-V--HAPS-SGITVYPQH  475 (484)
Q Consensus       400 ~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~-~--~~~~-~~~~~~~~~  475 (484)
                      ++|+||||+++++.. . ....|+|||.|+|.|+|++||++|++++++.|+++|+|+++.+. .  .... .+.+..| .
T Consensus       386 ~~F~PeR~l~~~~~~-~-~~~~~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~  462 (476)
T 3e6i_A          386 EKFKPEHFLNENGKF-K-YSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIP-P  462 (476)
T ss_dssp             TSCCGGGGBCTTSSB-C-CCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCTTTCCCSCSEESSSEEC-C
T ss_pred             cccCchhhcCCCCCc-c-CccceecCCCCCccCccHHHHHHHHHHHHHHHHHhcEeecCCCCCCCCCCcccCccccCC-C
Confidence            999999999864432 2 23689999999999999999999999999999999999985332 2  2222 3444455 5


Q ss_pred             CcceeeecC
Q 046539          476 GAHMILNKL  484 (484)
Q Consensus       476 ~~~v~~~~~  484 (484)
                      +++|+++||
T Consensus       463 ~~~~~~~~R  471 (476)
T 3e6i_A          463 RYKLCVIPR  471 (476)
T ss_dssp             CCCEEEEEC
T ss_pred             CeEEEEEec
Confidence            799999997


No 10 
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00  E-value=6.1e-72  Score=553.45  Aligned_cols=420  Identities=20%  Similarity=0.343  Sum_probs=332.4

Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhC
Q 046539           39 QGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKH  118 (484)
Q Consensus        39 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~  118 (484)
                      +.+|||+++|++||++.+..                 ++++.++.+++++||+||++++|+.+.|+++||+++++++.++
T Consensus        10 ~~pPgP~~~p~iG~~~~~~~-----------------~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~   72 (476)
T 1po5_A           10 KLPPGPSPLPVLGNLLQMDR-----------------KGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQ   72 (476)
T ss_dssp             CCCCCSCCBTTTBTGGGCCT-----------------TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTT
T ss_pred             CCCcCCCCCCccccHHhccC-----------------CcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhC
Confidence            36899999999999987621                 2677899999999999999999999999999999999999765


Q ss_pred             C-cccCCCCCc-cccc-cccceeecCCcchhHHHhhhccCCChH--HHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 046539          119 D-IFQKPKGNS-LGKL-VVNGMVTYEGEQWSKVRKIANPAFHQD--KLKDMLPKMYLSCNHMIRKLFEIAASDEESFELD  193 (484)
Q Consensus       119 ~-~~~~~~~~~-~~~~-~g~~~~~~~~~~~~~~R~~~~~~f~~~--~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vd  193 (484)
                      . .|++++... ...+ .+.++++++|+.|+++|+++.+.|+..  +++.+++.+.++++++++.|.+.     .+..+|
T Consensus        73 ~~~f~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~-----~~~~~d  147 (476)
T 1po5_A           73 AEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKS-----KGALLD  147 (476)
T ss_dssp             TTTTCEECCGGGGCSCCSSCCCCCSSHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT-----TTCCBC
T ss_pred             cHhhCCCCCcHHHHhhcCCCceEecCCcHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHhc-----CCCccC
Confidence            4 676543322 2222 356788889999999999999998876  45778999999999999999753     345799


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCccchh-HHHHHHHHHHHHHHhh-----hc-------ccccchhH--------------H
Q 046539          194 IWPHIQALAADVISRTAFGSNYDDGR-KIFELIREQSHLFIEV-----SQ-------FDYIPGWR--------------E  246 (484)
Q Consensus       194 l~~~~~~~~~~~i~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~-----~~-------~~~~p~~~--------------~  246 (484)
                      +.+++..+++|+++.++||.+++..+ ++......+...+...     ..       ..++|...              .
T Consensus       148 ~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp~~~~~~~~~~~~~~~~~~  227 (476)
T 1po5_A          148 NTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIG  227 (476)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCCCTTCHHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSSCSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence            99999999999999999998765322 2222222222211000     00       11223211              1


Q ss_pred             HHHHhc-----cCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHH
Q 046539          247 EALRIG-----KASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQ  321 (484)
Q Consensus       247 ~~~~~~-----~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~  321 (484)
                      +.++..     ....+|+++.++....+...+.+..++++++.+++.++++||+|||+++++|++++|++||++|+++++
T Consensus       228 ~~i~~r~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~  307 (476)
T 1po5_A          228 QSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQK  307 (476)
T ss_dssp             HHHHHHHTTCCTTSCCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCcccHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            111111     112468999988654321001123478999999999999999999999999999999999999999999


Q ss_pred             HHHHHhC-CCCCChhhhccChhHHHHHHHhhcCCCCccc-ccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCC
Q 046539          322 EVFQVLG-NKEPKFDELNRLKMVGKIIYEVFRIYSPAYL-IFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDA  399 (484)
Q Consensus       322 Ei~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p  399 (484)
                      ||+++++ ++.++++++++|||++|||+|+||++|+++. ++|.+++|++++||.|||||.|.++.+++||||++| +||
T Consensus       308 Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~~-~dp  386 (476)
T 1po5_A          308 EIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYF-ETP  386 (476)
T ss_dssp             HHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTC-SST
T ss_pred             HHHHHhCCCCCCChHHHhcCcHHHHHHHHHHHhccCCCCCCccccCCCceecCEecCCCCEEEeehHhHhcCcccc-CCc
Confidence            9999998 4678999999999999999999999999995 899999999999999999999999999999999999 999


Q ss_pred             CCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcc---cCC-CCcceeccCC
Q 046539          400 KAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYV---HAP-SSGITVYPQH  475 (484)
Q Consensus       400 ~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~---~~~-~~~~~~~~~~  475 (484)
                      ++|+||||++.++.. ..+ ..|+|||.|+|.|+|++||++|++++++.|+++|++++.++..   ... ..+.+..| .
T Consensus       387 ~~F~PeR~l~~~~~~-~~~-~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~  463 (476)
T 1po5_A          387 NTFNPGHFLDANGAL-KRN-EGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVP-P  463 (476)
T ss_dssp             TSCCGGGGBCTTSCB-CCC-TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGGGCCCCCCSTTSSCCC-C
T ss_pred             cccCchhhCCCCCCc-cCC-ccccCCCCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCCCCCccCCcCceeecC-c
Confidence            999999999753321 122 6899999999999999999999999999999999999887642   122 44666777 7


Q ss_pred             CcceeeecC
Q 046539          476 GAHMILNKL  484 (484)
Q Consensus       476 ~~~v~~~~~  484 (484)
                      +++|++++|
T Consensus       464 ~~~v~~~~R  472 (476)
T 1po5_A          464 SYQIRFLAR  472 (476)
T ss_dssp             CCCBEEEEC
T ss_pred             ceEEEEEec
Confidence            899999987


No 11 
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00  E-value=7.4e-72  Score=553.20  Aligned_cols=419  Identities=20%  Similarity=0.318  Sum_probs=326.7

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCC
Q 046539           40 GFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHD  119 (484)
Q Consensus        40 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~  119 (484)
                      .+|||+++|++||+..+..                 ++++.++.+++++||+||++++|+.+.|+++||+++++++.++.
T Consensus        12 ~pPgP~~~p~iG~~~~~~~-----------------~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~   74 (477)
T 1r9o_A           12 LPPGPTPLPVIGNILQIGI-----------------KDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLG   74 (477)
T ss_dssp             CCCCSSSCC-----CCBCH-----------------HHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTT
T ss_pred             CCCCCCCCceeccHhhcCC-----------------CChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhccc
Confidence            6899999999999887621                 24667899999999999999999989999999999999997654


Q ss_pred             -cccCCCCCc-ccc-ccccceeecCCcchhHHHhhhccCCChH--HHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccch
Q 046539          120 -IFQKPKGNS-LGK-LVVNGMVTYEGEQWSKVRKIANPAFHQD--KLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDI  194 (484)
Q Consensus       120 -~~~~~~~~~-~~~-~~g~~~~~~~~~~~~~~R~~~~~~f~~~--~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl  194 (484)
                       .|++++... ... ..+.++++.+|+.|+++|+++.+.|+..  .++.+++.+.++++.+++.|.+.     .+..+|+
T Consensus        75 ~~f~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~-----~~~~vd~  149 (477)
T 1r9o_A           75 EEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKT-----KASPCDP  149 (477)
T ss_dssp             TTTCEECCCSCCCTTTCTTSSTTCCHHHHHHHHHHHHHHHTTSSSCSSCHHHHHHHHHHHHHHHHHTT-----TTSCBCT
T ss_pred             HhhCCCCcchhhhhccCCCceEecCChHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhc-----CCCccCh
Confidence             676543322 222 2456788889999999999999998876  44678999999999999998742     2357999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCccchh-HHHHHHHHHHHHHHhhh-----c-------ccccchhH--------------H-
Q 046539          195 WPHIQALAADVISRTAFGSNYDDGR-KIFELIREQSHLFIEVS-----Q-------FDYIPGWR--------------E-  246 (484)
Q Consensus       195 ~~~~~~~~~~~i~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~-----~-------~~~~p~~~--------------~-  246 (484)
                      .+++..+++|+++.++||.+++..+ ++......+...+....     .       ..++|...              . 
T Consensus       150 ~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~~  229 (477)
T 1r9o_A          150 TFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSYILE  229 (477)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCCCTTCHHHHHHHHHHHHHHHHHTCCBC-------CCCSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHccCcCCCCCHHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999998765332 22222222222211100     0       11223211              1 


Q ss_pred             ---HHHHh-ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHH
Q 046539          247 ---EALRI-GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQE  322 (484)
Q Consensus       247 ---~~~~~-~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~E  322 (484)
                         +..+. .....+|+++.++....+...+.+..++++++.+++.++++||+|||+++++|++++|++||++|+++++|
T Consensus       230 ~i~~r~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~E  309 (477)
T 1r9o_A          230 KVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEE  309 (477)
T ss_dssp             HHHHHHHTCCTTCCCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             HHHHHHhccCCCCchHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence               11111 11234689999886543211011345899999999999999999999999999999999999999999999


Q ss_pred             HHHHhC-CCCCChhhhccChhHHHHHHHhhcCCCCccc-ccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCC
Q 046539          323 VFQVLG-NKEPKFDELNRLKMVGKIIYEVFRIYSPAYL-IFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAK  400 (484)
Q Consensus       323 i~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~  400 (484)
                      |+++++ ++.++++++++|||++|||+|+||++|+++. ++|.+++|++++||.|||||.|.++.+++||||++| +||+
T Consensus       310 i~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~-~dP~  388 (477)
T 1r9o_A          310 IERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEF-PNPE  388 (477)
T ss_dssp             HHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTS-SSTT
T ss_pred             HHHhcCCCCCCChHhhccCcHHHHHHHHHHHhcCCCCCCCceeccCCccccceecCCCCEEEEecHHhhCCcccC-CCcc
Confidence            999998 4678999999999999999999999999995 899999999999999999999999999999999999 9999


Q ss_pred             CCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcc---cCC-CCcceeccCCC
Q 046539          401 AFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYV---HAP-SSGITVYPQHG  476 (484)
Q Consensus       401 ~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~---~~~-~~~~~~~~~~~  476 (484)
                      +|+||||++.++.. ..+ ..|+|||.|+|.|+|++||++|++++++.|+++|+++++++..   ... ..+.+..| .+
T Consensus       389 ~F~PeR~l~~~~~~-~~~-~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~  465 (477)
T 1r9o_A          389 MFDPHHFLDEGGNF-KKS-KYFMPFSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVP-PF  465 (477)
T ss_dssp             SCCGGGGBCTTSCB-CCC-TTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCCCBCCSSSCBC-CC
T ss_pred             ccCccceECCCCCc-Ccc-ccccCCCCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCCCCCccCCcCceeecC-CC
Confidence            99999999753321 122 6899999999999999999999999999999999999987642   122 44566677 68


Q ss_pred             cceeeecC
Q 046539          477 AHMILNKL  484 (484)
Q Consensus       477 ~~v~~~~~  484 (484)
                      ++|++++|
T Consensus       466 ~~~~~~~R  473 (477)
T 1r9o_A          466 YQLCFIPI  473 (477)
T ss_dssp             CCEEEEEC
T ss_pred             eEEEEEEe
Confidence            99999987


No 12 
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00  E-value=9.4e-72  Score=552.10  Aligned_cols=419  Identities=20%  Similarity=0.332  Sum_probs=333.2

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCC
Q 046539           40 GFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHD  119 (484)
Q Consensus        40 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~  119 (484)
                      .+|||+++|++||+..+..                 ++++.++.+++++||+||++++++.+.|+++||+++++|+.++.
T Consensus        11 ~pPgP~~~p~iG~~~~~~~-----------------~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~   73 (476)
T 2fdv_A           11 LPPGPTPLPFIGNYLQLNT-----------------EQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQA   73 (476)
T ss_dssp             CCCCCCCBTTTBTGGGCCT-----------------TBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTT
T ss_pred             CCCCCCCCcccccHhhcCC-----------------cchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcCh
Confidence            5899999999999987621                 25678999999999999999999999999999999999996644


Q ss_pred             -cccCCCCCc-cccc-cccceeecCCcchhHHHhhhccCCChHHH--hhhHHHHHHHHHHHHHHHHHHHhcCCCCcccch
Q 046539          120 -IFQKPKGNS-LGKL-VVNGMVTYEGEQWSKVRKIANPAFHQDKL--KDMLPKMYLSCNHMIRKLFEIAASDEESFELDI  194 (484)
Q Consensus       120 -~~~~~~~~~-~~~~-~g~~~~~~~~~~~~~~R~~~~~~f~~~~l--~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl  194 (484)
                       .|++++... ...+ .+.++++.+|+.|+++|+++.+.|+...+  +.+++.+.++++++++.|.+.     ++..+|+
T Consensus        74 ~~f~~~~~~~~~~~~~~~~~l~~~~g~~~~~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~-----~~~~vd~  148 (476)
T 2fdv_A           74 EEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGIEERIQEEAGFLIDALRGT-----GGANIDP  148 (476)
T ss_dssp             TTTCEECCCHHHHHHHTTCSSSSCCHHHHHHHHHHHHHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHT-----TTCCBCC
T ss_pred             HhhCCCCCcHHHhhhcCCCCeEecCchHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHhc-----CCCccCh
Confidence             676544322 1111 25678888999999999999999987766  789999999999999998753     3457999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCccchh-HHH---HHHHHHHHHHH-------hhh-c-ccccchhH--------------HH
Q 046539          195 WPHIQALAADVISRTAFGSNYDDGR-KIF---ELIREQSHLFI-------EVS-Q-FDYIPGWR--------------EE  247 (484)
Q Consensus       195 ~~~~~~~~~~~i~~~~fG~~~~~~~-~~~---~~~~~~~~~~~-------~~~-~-~~~~p~~~--------------~~  247 (484)
                      .+++..+++|+++.++||.+++..+ +..   ....+......       ... . ..++|...              .+
T Consensus       149 ~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~  228 (476)
T 2fdv_A          149 TFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAK  228 (476)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCCCTTCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSCSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCcCCCCCHHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999775322 222   22222221110       000 0 11233211              11


Q ss_pred             HHHhc-----cCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHH
Q 046539          248 ALRIG-----KASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQE  322 (484)
Q Consensus       248 ~~~~~-----~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~E  322 (484)
                      .++..     ....+|+++.+++...+...+.+..++++++.+++.++++||+|||+++++|++++|++||++|+++++|
T Consensus       229 ~i~~r~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E  308 (476)
T 2fdv_A          229 KVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEE  308 (476)
T ss_dssp             HHHHHHTTCCTTSCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCccHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            11111     1234689999987643211112346899999999999999999999999999999999999999999999


Q ss_pred             HHHHhCC-CCCChhhhccChhHHHHHHHhhcCCCCcc-cccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCC
Q 046539          323 VFQVLGN-KEPKFDELNRLKMVGKIIYEVFRIYSPAY-LIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAK  400 (484)
Q Consensus       323 i~~~~~~-~~~~~~~~~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~  400 (484)
                      |++++++ +.++++++++|||++|||+|+||++|+++ .++|++++|++++||.|||||.|.++.+++||||++| +||+
T Consensus       309 i~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~-~dp~  387 (476)
T 2fdv_A          309 IDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFF-SNPQ  387 (476)
T ss_dssp             HHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTC-SSTT
T ss_pred             HHHhhcCCCCCChhhhhcChHHHHHHHHHHHhcCCcccCcceeccCCeeECCEeeCCCCEEEeehHHhhCChhhc-CCcc
Confidence            9999984 56899999999999999999999999999 5899999999999999999999999999999999999 9999


Q ss_pred             CCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcc---cCC-CCcceeccCCC
Q 046539          401 AFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYV---HAP-SSGITVYPQHG  476 (484)
Q Consensus       401 ~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~---~~~-~~~~~~~~~~~  476 (484)
                      +|+||||++.++.. ..+ ..|+|||.|+|.|+|++||++|++++++.|+++|+++++++..   ... ..+.+..| .+
T Consensus       388 ~F~PeR~l~~~~~~-~~~-~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~  464 (476)
T 2fdv_A          388 DFNPQHFLNEKGQF-KKS-DAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIP-RN  464 (476)
T ss_dssp             SCCGGGGBCTTSCB-CCC-TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCSCSEESSSEEC-CC
T ss_pred             ccCchhhCCCCCCC-CCC-cCcccCCCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCCCCCccccccceeecC-Cc
Confidence            99999999753321 122 6899999999999999999999999999999999999987642   122 34566777 68


Q ss_pred             cceeeecC
Q 046539          477 AHMILNKL  484 (484)
Q Consensus       477 ~~v~~~~~  484 (484)
                      ++|+++||
T Consensus       465 ~~v~~~~R  472 (476)
T 2fdv_A          465 YTMSFLPR  472 (476)
T ss_dssp             CCEEEEEC
T ss_pred             eEEEEEec
Confidence            99999987


No 13 
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.2e-71  Score=556.48  Aligned_cols=423  Identities=20%  Similarity=0.276  Sum_probs=314.5

Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhC
Q 046539           39 QGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKH  118 (484)
Q Consensus        39 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~  118 (484)
                      +.||||+++|++||++.+.+                  +++.++.+|+++||+||++++|+.++|+|+||+++++++.++
T Consensus         9 ~~pPgP~~~P~iG~~~~~~~------------------~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~   70 (507)
T 3pm0_A            9 GKPPGPFAWPLIGNAAAVGQ------------------AAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQ   70 (507)
T ss_dssp             -------------------C------------------CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTT
T ss_pred             CCCcCCCCCCeeCchhhcCc------------------cHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhC
Confidence            36899999999999987742                  567899999999999999999999999999999999999766


Q ss_pred             C-cccCCCCCc-cccc-cccceee-cCCcchhHHHhhhccCCChHH------HhhhHHHHHHHHHHHHHHHHHHHhcCCC
Q 046539          119 D-IFQKPKGNS-LGKL-VVNGMVT-YEGEQWSKVRKIANPAFHQDK------LKDMLPKMYLSCNHMIRKLFEIAASDEE  188 (484)
Q Consensus       119 ~-~~~~~~~~~-~~~~-~g~~~~~-~~~~~~~~~R~~~~~~f~~~~------l~~~~~~i~~~~~~l~~~l~~~~~~~~~  188 (484)
                      . .|++++... ...+ .|.++++ .+|+.|+++|+++++.|+...      ++.+++.+.++++++++.+.+...   +
T Consensus        71 ~~~f~~r~~~~~~~~~~~g~~l~~~~~g~~w~~~R~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~---~  147 (507)
T 3pm0_A           71 GSAFADRPSFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSA---D  147 (507)
T ss_dssp             TTTSCBCCCCHHHHHGGGGTCSSSSCSSHHHHHHHHHHHHHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTG---G
T ss_pred             cHhhCCCCcchHHHhhcCCCceEECCCChHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcc---c
Confidence            5 777655433 2222 3556654 469999999999988665332      234899999999999999986432   3


Q ss_pred             CcccchHHHHHHHHHHHHHHHHhCCCccchhHH-HHH---HHHHHHHHHhhhc------ccccchh-----H--------
Q 046539          189 SFELDIWPHIQALAADVISRTAFGSNYDDGRKI-FEL---IREQSHLFIEVSQ------FDYIPGW-----R--------  245 (484)
Q Consensus       189 ~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~-~~~---~~~~~~~~~~~~~------~~~~p~~-----~--------  245 (484)
                      +..+|+.+++..+++|+++.++||.+++..++. ...   ..++.........      ..++|.+     .        
T Consensus       148 ~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~  227 (507)
T 3pm0_A          148 GAFLDPRPLTVVAVANVMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRN  227 (507)
T ss_dssp             GCCBCCHHHHHHHHHHHHHHHHTSCCCCTTCHHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHH
T ss_pred             CCCcChHHHHHHHHHHHHHHHHccccCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHH
Confidence            457999999999999999999999987654322 111   1222222111111      1123322     1        


Q ss_pred             ---------HHHHHhcc--CCchhHHHHHHHhhhHhhHH----hhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHh
Q 046539          246 ---------EEALRIGK--ASNDDLLGLLMESNYKEIQE----KEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLC  310 (484)
Q Consensus       246 ---------~~~~~~~~--~~~~~~l~~ll~~~~~~~~~----~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~  310 (484)
                               .+..+...  ....|+++.+++.......+    .+..++++++.+++..+++||+|||+++++|++++|+
T Consensus       228 ~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~  307 (507)
T 3pm0_A          228 FSNFILDKFLRHCESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFT  307 (507)
T ss_dssp             HHHHHHHHHHHHHHHCCTTCCCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccccccCCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Confidence                     01111111  24678999988554322100    1125899999999999999999999999999999999


Q ss_pred             cChHHHHHHHHHHHHHhC-CCCCChhhhccChhHHHHHHHhhcCCCCccc-ccccccccceecCEEeCCCCeEEechhhh
Q 046539          311 MHPIWQERARQEVFQVLG-NKEPKFDELNRLKMVGKIIYEVFRIYSPAYL-IFRTNVEETKLGDFILPPGVLLSLPIILV  388 (484)
Q Consensus       311 ~~p~~~~~l~~Ei~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~  388 (484)
                      +||++|+++++||+++++ ++.++++++++||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|.++.+++
T Consensus       308 ~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~  387 (507)
T 3pm0_A          308 RYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSV  387 (507)
T ss_dssp             HCHHHHHHHHHHHHHHTCTTSCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBSHHH
T ss_pred             hCHHHHHHHHHHHHHhcCCCCCCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceEcCEEECCCCEEEeChHHH
Confidence            999999999999999998 5678999999999999999999999999997 78999999999999999999999999999


Q ss_pred             hcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCC--C
Q 046539          389 HHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAP--S  466 (484)
Q Consensus       389 ~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~--~  466 (484)
                      ||||++| +||++|+||||++.++.........++|||.|+|+|+|++||++|++++++.|+++|+|+++++.....  .
T Consensus       388 ~~d~~~~-~dp~~F~PeRfl~~~~~~~~~~~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~  466 (507)
T 3pm0_A          388 NHDPLKW-PNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFS  466 (507)
T ss_dssp             HSCTTTC-SSSSSCCGGGGBCTTSCBCHHHHTTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTCCSCCCEE
T ss_pred             hCCcccC-CCcCccCCCcccCCCCcccCCCcccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCCCCCCCCC
Confidence            9999999 899999999999864321111115799999999999999999999999999999999999987643322  2


Q ss_pred             CcceeccCCCcceeeecC
Q 046539          467 SGITVYPQHGAHMILNKL  484 (484)
Q Consensus       467 ~~~~~~~~~~~~v~~~~~  484 (484)
                      .+.+..|+ +++|++++|
T Consensus       467 ~~~~~~p~-~~~v~~~~R  483 (507)
T 3pm0_A          467 YGLTIKPK-SFKVNVTLR  483 (507)
T ss_dssp             ESSSEEEC-SCCEEEEES
T ss_pred             CCccccCC-CcEEEEEEc
Confidence            24455665 579999987


No 14 
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00  E-value=1.1e-70  Score=544.60  Aligned_cols=422  Identities=20%  Similarity=0.341  Sum_probs=329.8

Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhC
Q 046539           39 QGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKH  118 (484)
Q Consensus        39 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~  118 (484)
                      +.+|||+++|++||+..+...            .   ..++.++.+++++||+||++++++.++++++||+++++++.++
T Consensus        12 ~lpPgP~~~p~~G~~~~~~~~------------~---~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~   76 (481)
T 3czh_A           12 GFPPGPPGLPFIGNIYSLAAS------------S---ELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQ   76 (481)
T ss_dssp             CCCCCCCCBTTTBHHHHHHHC------------S---SCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTT
T ss_pred             CCCCCCCCCcccccHhhcCcc------------c---CcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhc
Confidence            368999999999999887541            0   0167789999999999999999999999999999999999876


Q ss_pred             C-cccCCCCCc-cccccc-cce-eecCCcchhHHHhhhccCCChHHH--hhhHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 046539          119 D-IFQKPKGNS-LGKLVV-NGM-VTYEGEQWSKVRKIANPAFHQDKL--KDMLPKMYLSCNHMIRKLFEIAASDEESFEL  192 (484)
Q Consensus       119 ~-~~~~~~~~~-~~~~~g-~~~-~~~~~~~~~~~R~~~~~~f~~~~l--~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~v  192 (484)
                      . .|++++... ...+.+ .++ +..+|+.|+++|+++.+.|+..++  +.+++.+.++++.+++.|.+.     ++..+
T Consensus        77 ~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~-----~~~~~  151 (481)
T 3czh_A           77 SEIFADRPCLPLFMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIETY-----KGRPF  151 (481)
T ss_dssp             TTTTCBCCCCHHHHHHHTTCSSTTCCSSHHHHHHHHHHHHHHHHTTTTSTTHHHHHHHHHHHHHHHHHTT-----TTCCB
T ss_pred             hHhhCCCCCcHHHHhhcCCCCeEeCCCChHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHc-----CCCCc
Confidence            5 677655332 222222 353 457899999999999999976543  678999999999999998742     34579


Q ss_pred             chHHHHHHHHHHHHHHHHhCCCccch-hHHHH---HHHHHHHHHHhh--------hcccccch--hH-------------
Q 046539          193 DIWPHIQALAADVISRTAFGSNYDDG-RKIFE---LIREQSHLFIEV--------SQFDYIPG--WR-------------  245 (484)
Q Consensus       193 dl~~~~~~~~~~~i~~~~fG~~~~~~-~~~~~---~~~~~~~~~~~~--------~~~~~~p~--~~-------------  245 (484)
                      |+.+++..+++|+++.++||.+++.. .+...   ...+........        ....++|.  +.             
T Consensus       152 d~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~  231 (481)
T 3czh_A          152 DFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFL  231 (481)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSSSHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCchHHHHHHHHHHHHHHHH
Confidence            99999999999999999999987532 22222   222222211100        00112331  11             


Q ss_pred             HHHHHhc-----cCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHH
Q 046539          246 EEALRIG-----KASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERAR  320 (484)
Q Consensus       246 ~~~~~~~-----~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~  320 (484)
                      .+.++..     ....+|+++.+++...+...+.+..++++++.+++.++++||+|||+++++|++++|++||++|++++
T Consensus       232 ~~~i~~r~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~  311 (481)
T 3czh_A          232 SRLIEKASVNRKPQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQ  311 (481)
T ss_dssp             HHHHHHHHTTCCTTCCSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCchHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHH
Confidence            1111111     12346899999876433111113468999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhC-CCCCChhhhccChhHHHHHHHhhcCCCCccc-ccccccccceecCEEeCCCCeEEechhhhhcCCCCccCC
Q 046539          321 QEVFQVLG-NKEPKFDELNRLKMVGKIIYEVFRIYSPAYL-IFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDD  398 (484)
Q Consensus       321 ~Ei~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~  398 (484)
                      +|++++++ ++.++++++++|||++|||+|+||++|+++. ++|.+++|++++||.|||||.|.++.+++||||++| +|
T Consensus       312 ~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~d  390 (481)
T 3czh_A          312 KEIDLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYW-RD  390 (481)
T ss_dssp             HHHHHHTCSSSCCCGGGGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTC-SS
T ss_pred             HHHHHhcCCCCCCChhhhhhChHHHHHHHHHHhhccccccCcceeecCCeEEeCEEcCCCCEEEechHHHhCCcccC-CC
Confidence            99999998 5678999999999999999999999999995 889999999999999999999999999999999999 99


Q ss_pred             CCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCccc--CCCCcceeccCCC
Q 046539          399 AKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVH--APSSGITVYPQHG  476 (484)
Q Consensus       399 p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~--~~~~~~~~~~~~~  476 (484)
                      |++|+||||++.++.. . ....++|||.|+|.|+|++||++|++++++.|+++|+++++++...  ....+.+..|. +
T Consensus       391 P~~F~PeR~l~~~~~~-~-~~~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~-~  467 (481)
T 3czh_A          391 PEVFHPERFLDSSGYF-A-KKEALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQPQ-P  467 (481)
T ss_dssp             TTSCCGGGGBCTTSCB-C-CCTTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGCCCCCCCCSSSSCCCC-C
T ss_pred             ccccCCCceeCCCCCC-c-CCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCCCCCcccCCCceecCC-c
Confidence            9999999999753321 2 2368999999999999999999999999999999999998765322  12335555554 6


Q ss_pred             cceeeecC
Q 046539          477 AHMILNKL  484 (484)
Q Consensus       477 ~~v~~~~~  484 (484)
                      +.++++||
T Consensus       468 ~~~~~~~~  475 (481)
T 3czh_A          468 YLICAERR  475 (481)
T ss_dssp             CCBEEEEC
T ss_pred             eEEEEEec
Confidence            88999887


No 15 
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00  E-value=2.6e-71  Score=551.37  Aligned_cols=422  Identities=22%  Similarity=0.331  Sum_probs=326.7

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCC
Q 046539           40 GFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHD  119 (484)
Q Consensus        40 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~  119 (484)
                      .+|||+++|++||++.+..                  +++..+.+++++|||||++++|+.++++++||+++++++.++.
T Consensus        17 ~~PgP~~~p~~G~~~~~~~------------------~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~   78 (495)
T 2hi4_A           17 SPPEPWGWPLLGHVLTLGK------------------NPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQG   78 (495)
T ss_dssp             CCCCCCCBTTTBTHHHHTT------------------CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTG
T ss_pred             CCCCCCCCcceeeHHhcCc------------------cHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcc
Confidence            5699999999999987632                  5677899999999999999999999999999999999998765


Q ss_pred             -cccCCCCCc-cccc-cccceeec--CCcchhHHHhhhccCCCh---HHH---h---hhHHHHHHHHHHHHHHHHHHHhc
Q 046539          120 -IFQKPKGNS-LGKL-VVNGMVTY--EGEQWSKVRKIANPAFHQ---DKL---K---DMLPKMYLSCNHMIRKLFEIAAS  185 (484)
Q Consensus       120 -~~~~~~~~~-~~~~-~g~~~~~~--~~~~~~~~R~~~~~~f~~---~~l---~---~~~~~i~~~~~~l~~~l~~~~~~  185 (484)
                       .|++++... ...+ .+.+++++  +|+.|+++|+++.+.|+.   .++   +   .+++.+.++++++++.|.+... 
T Consensus        79 ~~f~~r~~~~~~~~~~~~~~l~~~~~~g~~w~~~Rr~~~~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~-  157 (495)
T 2hi4_A           79 DDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMA-  157 (495)
T ss_dssp             GGSCBCCCCHHHHTSTTSCCTTTSSCCSHHHHHHHHHHHHHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             hhhCCCCCcHHHHHhcCCCCEEEcCCCChHHHHHHHHHHHHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhcc-
Confidence             677554332 2222 24567776  699999999999987543   222   1   6899999999999999987443 


Q ss_pred             CCCCcccchHHHHHHHHHHHHHHHHhCCCccchh-HHHHH---HHHHHHHHHhhhcccc------cch--hH--------
Q 046539          186 DEESFELDIWPHIQALAADVISRTAFGSNYDDGR-KIFEL---IREQSHLFIEVSQFDY------IPG--WR--------  245 (484)
Q Consensus       186 ~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~------~p~--~~--------  245 (484)
                        ++..+|+.+++..+++|+++.++||.+++..+ +....   ..++...........+      +|.  +.        
T Consensus       158 --~~~~~d~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~  235 (495)
T 2hi4_A          158 --GPGHFDPYNQVVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQR  235 (495)
T ss_dssp             --TTSCBCHHHHHHHHHHHHHHHHHHGGGSCTTCHHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCCHHHHHHHHHHHH
T ss_pred             --CCCccchHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHhcCchHHHHHHHHHHH
Confidence              34579999999999999999999999765322 22221   1222221111001112      221  11        


Q ss_pred             -----H----HHHHhc-cCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHH
Q 046539          246 -----E----EALRIG-KASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIW  315 (484)
Q Consensus       246 -----~----~~~~~~-~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~  315 (484)
                           .    +..+.. ....+|+++.+++...+...+.+..++++++.+++.++++||+|||+++++|++++|++||++
T Consensus       236 ~~~~~~~~i~~r~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~  315 (495)
T 2hi4_A          236 FLWFLQKTVQEHYQDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEI  315 (495)
T ss_dssp             HHHHHHHHHHHHHHTCCTTCCCSHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred             HHHHHHHHHHHHHHhhcccccccHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHH
Confidence                 0    111111 123468999998653221001123589999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhC-CCCCChhhhccChhHHHHHHHhhcCCCCccc-ccccccccceecCEEeCCCCeEEechhhhhcCCC
Q 046539          316 QERARQEVFQVLG-NKEPKFDELNRLKMVGKIIYEVFRIYSPAYL-IFRTNVEETKLGDFILPPGVLLSLPIILVHHDHE  393 (484)
Q Consensus       316 ~~~l~~Ei~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~  393 (484)
                      |+++++||+++++ ++.++++++++|||++|||+|+||++|+++. ++|.+.+|++++||.|||||.|.++.+++||||+
T Consensus       316 ~~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~  395 (495)
T 2hi4_A          316 QRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPE  395 (495)
T ss_dssp             HHHHHHHHHHHTTTSSCCCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBHHHHHHCTT
T ss_pred             HHHHHHHHHHhcCCCCCCChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeEeCeEECCCCEEEeChHHhhCCcc
Confidence            9999999999998 5568999999999999999999999999996 8899999999999999999999999999999999


Q ss_pred             CccCCCCCCCCCCCCCcchhhh-cCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCccc--CCCCcce
Q 046539          394 YWGDDAKAFNPDRFSEGVSKAA-KNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVH--APSSGIT  470 (484)
Q Consensus       394 ~~g~~p~~F~P~R~l~~~~~~~-~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~--~~~~~~~  470 (484)
                      +| +||++|+||||++.++... ......++|||.|+|.|+|++||++|++++++.|+++|+++++++...  ....+.+
T Consensus       396 ~~-~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  474 (495)
T 2hi4_A          396 LW-EDPSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGLT  474 (495)
T ss_dssp             TC-SSTTSCCGGGGBCTTSSSBCHHHHTTCCCSCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTCCCCCCCBCSSS
T ss_pred             cC-CCcCccCcccccCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCCCCCccccCCce
Confidence            99 9999999999997533200 001267999999999999999999999999999999999998765432  2234566


Q ss_pred             eccCCCcceeeecC
Q 046539          471 VYPQHGAHMILNKL  484 (484)
Q Consensus       471 ~~~~~~~~v~~~~~  484 (484)
                      ..|....+|+++ |
T Consensus       475 ~~p~~~~~v~~~-R  487 (495)
T 2hi4_A          475 MKHARCEHVQAR-R  487 (495)
T ss_dssp             CBCCCCCCBEEE-C
T ss_pred             ecCCCcceEEEE-E
Confidence            677643388887 6


No 16 
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00  E-value=3.3e-71  Score=546.54  Aligned_cols=416  Identities=23%  Similarity=0.344  Sum_probs=329.9

Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhC
Q 046539           39 QGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKH  118 (484)
Q Consensus        39 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~  118 (484)
                      +++|||+++|++||++++..                 ++++..+.+++++|||||++++++.+.|+++||+++++++.+.
T Consensus         3 ~~~PGP~~~p~iG~l~~~~~-----------------~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~   65 (470)
T 2ij2_A            3 KEMPQPKTFGELKNLPLLNT-----------------DKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES   65 (470)
T ss_dssp             CCCCCCCCCGGGTTGGGGCS-----------------SCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTT
T ss_pred             CCCCCCCCCCccccHHHHhc-----------------ccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhc
Confidence            37999999999999987631                 2566788999999999999999988999999999999999653


Q ss_pred             CcccCCCCCc---cccccccceeec--CCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Q 046539          119 DIFQKPKGNS---LGKLVVNGMVTY--EGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELD  193 (484)
Q Consensus       119 ~~~~~~~~~~---~~~~~g~~~~~~--~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vd  193 (484)
                       .|.+.....   +....+.++++.  +++.|+++|+++.+.|++.+++.+++.+.+.++++++.|.+.  .  ++..+|
T Consensus        66 -~f~~~~~~~~~~~~~~~~~~l~~~~~~g~~w~~~Rr~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--~--~~~~vd  140 (470)
T 2ij2_A           66 -RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL--N--ADEHIE  140 (470)
T ss_dssp             -TEEECCCHHHHHHHHHHTTSGGGSCTTSHHHHHHHHHHGGGGSTTTHHHHHHHHHHHHHHHHHHHHTC--C--TTCCEE
T ss_pred             -CcCcCchhHHHHHHHhcCCceEEcCCCchHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHHHHhh--C--CCCeEE
Confidence             355433211   122345677765  899999999999999999999999999999999999988642  1  345799


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCccch-----hHHHHHHHHHHHHHHhhhc----ccccchhH---------------HHHH
Q 046539          194 IWPHIQALAADVISRTAFGSNYDDG-----RKIFELIREQSHLFIEVSQ----FDYIPGWR---------------EEAL  249 (484)
Q Consensus       194 l~~~~~~~~~~~i~~~~fG~~~~~~-----~~~~~~~~~~~~~~~~~~~----~~~~p~~~---------------~~~~  249 (484)
                      +.+++..+++|+++.++||.+++..     ..+...+............    ..+++...               .+.+
T Consensus       141 ~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  220 (470)
T 2ij2_A          141 VPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKII  220 (470)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCCCCGGGCSSCCHHHHHHHHHHHHHHHTC---CTTSGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCcccccccCCCCHHHHHHHHHHHHHHHHHhhhhhHhhccchHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999886532     2233333322221111000    01121110               0111


Q ss_pred             H---hccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHH
Q 046539          250 R---IGKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQV  326 (484)
Q Consensus       250 ~---~~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~  326 (484)
                      +   ......+|+++.+++...++   .+..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++++
T Consensus       221 ~~r~~~~~~~~dll~~ll~~~~~~---~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~  297 (470)
T 2ij2_A          221 ADRKASGEQSDDLLTHMLNGKDPE---TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARV  297 (470)
T ss_dssp             HHHHHHCCCCSSHHHHHHHCCCTT---TCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             HHHHhcccCchhHHHHHHhccCcc---cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            1   11223468999998764321   23468999999999999999999999999999999999999999999999999


Q ss_pred             hCCCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecC-EEeCCCCeEEechhhhhcCCCCccCCCCCCCCC
Q 046539          327 LGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGD-FILPPGVLLSLPIILVHHDHEYWGDDAKAFNPD  405 (484)
Q Consensus       327 ~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g-~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~  405 (484)
                      +++..++++++++|||++|||+|+||++|+++.+.|.+.+|++++| |.|||||.|.++.+++||||++||+||++|+||
T Consensus       298 ~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~Pe  377 (470)
T 2ij2_A          298 LVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE  377 (470)
T ss_dssp             CCSSSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGG
T ss_pred             cCCCCCCHHHHhCCHHHHHHHHHHHhcCCCccccceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhCCCccccCcc
Confidence            9977799999999999999999999999999998899999999999 999999999999999999999998999999999


Q ss_pred             CCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCCCCcceeccCCCcceeeecC
Q 046539          406 RFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       406 R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      || ++ .  ...+...++|||.|+|.|+|++||++|++++++.|+++|+++..++.......+.+..|+ +++|++++|
T Consensus       378 R~-~~-~--~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~-~~~v~~~~R  451 (470)
T 2ij2_A          378 RF-EN-P--SAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE-GFVVKAKSK  451 (470)
T ss_dssp             GG-SS-G--GGSCTTSCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCCCCCEEESSSEEET-TCEEEEEEC
T ss_pred             cc-CC-C--CcCCCccccCCCCCCCcCCcHHHHHHHHHHHHHHHHHHeeEeeCCCCccccccceEecCC-CeEEEEEEc
Confidence            99 32 1  111226799999999999999999999999999999999999323222222345667788 999999987


No 17 
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00  E-value=7.7e-71  Score=541.90  Aligned_cols=414  Identities=17%  Similarity=0.286  Sum_probs=313.5

Q ss_pred             cCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhh
Q 046539           39 QGFSG-NSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLK  117 (484)
Q Consensus        39 ~~~Pg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~  117 (484)
                      +.||| |+++|++||+..+..                  +++.++.+++++||+||++++++.++++++||+++++++.+
T Consensus         4 ~~PPg~p~~~P~iG~~~~~~~------------------~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~   65 (455)
T 2cib_A            4 VALPRVSGGHDEHGHLEEFRT------------------DPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRA   65 (455)
T ss_dssp             -CCCBCSCCCBTTBTHHHHTT------------------CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHC
T ss_pred             CCCCCCCCCCCCccCHHHHhh------------------ChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhc
Confidence            36898 778999999988742                  56779999999999999999999989999999999999987


Q ss_pred             CC-cccCCCCCc-cccccccceeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchH
Q 046539          118 HD-IFQKPKGNS-LGKLVVNGMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIW  195 (484)
Q Consensus       118 ~~-~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~  195 (484)
                      ++ .|++++.+. ...++|.+++ .+++.|+++|+++.+.|+.++++.+.+.+.++++++++.|.       .++.+|+.
T Consensus        66 ~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~~~-------~~~~vd~~  137 (455)
T 2cib_A           66 GDDDLDQAKAYPFMTPIFGEGVV-FDASPERRKEMLHNAALRGEQMKGHAATIEDQVRRMIADWG-------EAGEIDLL  137 (455)
T ss_dssp             CTTTEECTTSCGGGHHHHC---------------------CCHHHHHHHHHHHHHHHHHHHTTCC-------SEEEEEHH
T ss_pred             CccccCcccchhHHHhhcCCccc-cCcHHHHHHHhhhccccCHHHHHHHHHHHHHHHHHHHHHhC-------CCCcEeHH
Confidence            64 677665443 3334555554 57999999999999999999999999999999999998864       23479999


Q ss_pred             HHHHHHHHHHHHHHHhCCCccc--hhHHHHHHHHHHHHHHhhh-cccccc--hhH-------------HHHHH----hcc
Q 046539          196 PHIQALAADVISRTAFGSNYDD--GRKIFELIREQSHLFIEVS-QFDYIP--GWR-------------EEALR----IGK  253 (484)
Q Consensus       196 ~~~~~~~~~~i~~~~fG~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~p--~~~-------------~~~~~----~~~  253 (484)
                      +++..+++++++.++||.++..  ..++......+........ ...++|  .+.             ...++    ...
T Consensus       138 ~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~  217 (455)
T 2cib_A          138 DFFAELTIYTSSACLIGKKFRDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPP  217 (455)
T ss_dssp             HHHHHHHHHHHHHHHTCHHHHTTCCHHHHHHHHHHHTTCCGGGGTCTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred             HHHHHHHHHHHHHHHcCCCcchhhhHHHHHHHHHHHhhhhHHHHhcccCCChhHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            9999999999999999987643  2334444433322111100 001122  111             11111    111


Q ss_pred             C--CchhHHHHHHHhhhHhhHHhhcC-CCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCC-
Q 046539          254 A--SNDDLLGLLMESNYKEIQEKEAG-MSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGN-  329 (484)
Q Consensus       254 ~--~~~~~l~~ll~~~~~~~~~~~~~-l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~-  329 (484)
                      .  ...|+++.+++...++    +.. ++++++.+++..+++||+|||+++++|++++|++||++|+++++|+++++++ 
T Consensus       218 ~~~~~~dll~~ll~~~~~~----~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~  293 (455)
T 2cib_A          218 TDKSDRDMLDVLIAVKAET----GTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDG  293 (455)
T ss_dssp             ----CCCHHHHHHHCBCTT----SSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGC
T ss_pred             CCCCcccHHHHHHHhhhhc----CCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC
Confidence            1  1228999998764322    223 8999999999999999999999999999999999999999999999999984 


Q ss_pred             CCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCC
Q 046539          330 KEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSE  409 (484)
Q Consensus       330 ~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~  409 (484)
                      ..++++++++|||++|||+|+||++|+++.++|.+++|++++||.||||+.|.++.+++||||++| +||++|+||||++
T Consensus       294 ~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~l~  372 (455)
T 2cib_A          294 RSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDF-PDPHDFVPARYEQ  372 (455)
T ss_dssp             CCHHHHTTSCCHHHHHHHHHHHHHSCSCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCGGGGST
T ss_pred             CCCCHHHHhcCHHHHHHHHHHHhcCCcccccceeeCCCceECCEEECCCCEEEEChHHhcCCcccC-CCccccCcccCCC
Confidence            567899999999999999999999999998899999999999999999999999999999999999 9999999999997


Q ss_pred             cchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCc-ccC-CCCcceeccCCCcceeeecC
Q 046539          410 GVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTY-VHA-PSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       410 ~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~-~~~-~~~~~~~~~~~~~~v~~~~~  484 (484)
                      ........+ ..++|||.|+|.|+|++||++|++++++.|+++|+++++... ... ...+.+..|..+++|++++|
T Consensus       373 ~~~~~~~~~-~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R  448 (455)
T 2cib_A          373 PRQEDLLNR-WTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVRYRRR  448 (455)
T ss_dssp             TTCHHHHCT-TTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCEECSSSSCEECSCCEEEEEEC
T ss_pred             CCcccccCC-ccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHheEEEeCCCccccccccccccccCCCCceEEEEEC
Confidence            543222223 679999999999999999999999999999999999987321 110 11345667888999999987


No 18 
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00  E-value=9.2e-71  Score=543.65  Aligned_cols=407  Identities=21%  Similarity=0.334  Sum_probs=309.5

Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhC
Q 046539           39 QGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKH  118 (484)
Q Consensus        39 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~  118 (484)
                      ..||||+++|++||+..+.+                  +++.++.++++ |||||++++++.++++++||+++++++.++
T Consensus        23 eppPgP~~~P~iG~~~~~~~------------------~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~   83 (467)
T 3dbg_A           23 EPPVAGGGVPLLGHGWRLAR------------------DPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP   83 (467)
T ss_dssp             BCCEECCCCSTTHHHHHHHH------------------CHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT
T ss_pred             CCCCCCCCCCcccchHHhcc------------------CHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc
Confidence            35789999999999999865                  56778999988 999999999999999999999999999887


Q ss_pred             Ccc-cCCCCCc-cccccc-cceeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchH
Q 046539          119 DIF-QKPKGNS-LGKLVV-NGMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIW  195 (484)
Q Consensus       119 ~~~-~~~~~~~-~~~~~g-~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~  195 (484)
                       .| .++..+. ...++| .++++.+|+.|+++|+++.+.|+.++++++.+.+.++++++++.|.       .+..+|+.
T Consensus        84 -~~~~~~~~~~~~~~~~g~~~l~~~dg~~h~~~R~~l~~~fs~~~l~~~~~~i~~~~~~l~~~l~-------~~~~~d~~  155 (467)
T 3dbg_A           84 -DYHIAGPLWESLEGLLGKEGVATANGPLHRRQRRTIQPAFRLDAIPAYGPIMEEEAHALTERWQ-------PGKTVDAT  155 (467)
T ss_dssp             -TC------------------------------CGGGHHHHSTTTSTTTHHHHHHHHHHHHHHSC-------TTSCEEHH
T ss_pred             -CcccccchHHHHHHhcCCCCcccCCcHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHhc-------cCCcCcHH
Confidence             55 4444333 455667 7888899999999999999999999999999999999999999885       34579999


Q ss_pred             HHHHHHHHHHHHHHHhCCCccch--hHHHHHHHHHHHHHHhhhc-----ccccch--hH-------------HHHHHh--
Q 046539          196 PHIQALAADVISRTAFGSNYDDG--RKIFELIREQSHLFIEVSQ-----FDYIPG--WR-------------EEALRI--  251 (484)
Q Consensus       196 ~~~~~~~~~~i~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~p~--~~-------------~~~~~~--  251 (484)
                      +++..+++++++.++||.++...  +.+......+.........     ..++|.  ..             ...++.  
T Consensus       156 ~~~~~~~~~vi~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~  235 (467)
T 3dbg_A          156 SESFRVAVRVAARCLLRGQYMDERAERLCVALATVFRGMYRRMVVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAERR  235 (467)
T ss_dssp             HHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHC------------------------CCHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhCCcccchhHHHHHHHHHHHHHHHHHHhccchhhhhhCCChHhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999987642  2233333322221111000     011111  00             111221  


Q ss_pred             -ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCC
Q 046539          252 -GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNK  330 (484)
Q Consensus       252 -~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~  330 (484)
                       ......|+++.+++...++    +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++++++++
T Consensus       236 ~~~~~~~dll~~ll~~~~~~----~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~  311 (467)
T 3dbg_A          236 ASGQKPDDLLTALLEAKDDN----GDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGR  311 (467)
T ss_dssp             TCCSSCCSHHHHHTTC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTS
T ss_pred             hcCCCchHHHHHHHhhccCC----CCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC
Confidence             1223568999998765432    23589999999999999999999999999999999999999999999999999988


Q ss_pred             CCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCc
Q 046539          331 EPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEG  410 (484)
Q Consensus       331 ~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~  410 (484)
                      .++++++++|||++|||+|+||++|+++.++|++.+|++++||.||||+.|.++.+++||||++| +||++|+||||+++
T Consensus       312 ~~~~~~l~~l~yl~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeRfl~~  390 (467)
T 3dbg_A          312 PVAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSY-DDNLEFDPDRWLPE  390 (467)
T ss_dssp             CCCHHHHTTCHHHHHHHHHHHHHSCSCCCEEEECSSCEEETTEEECTTCEEEECHHHHHTCTTTC-TTTTCCCGGGGSHH
T ss_pred             CCCHHHHhhCHHHHHHHHHHhhcCCCccccceeeCCCccCCCEEECCCCEEEEChHHhcCCchhc-CCccccCCccCCCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999 99999999999975


Q ss_pred             chhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCCCCcceeccCCCccee
Q 046539          411 VSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAPSSGITVYPQHGAHMI  480 (484)
Q Consensus       411 ~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~  480 (484)
                      ...  ......++|||.|+|.|+|++||++|++++++.|+++|++++.++....+..+.+++|+ +++++
T Consensus       391 ~~~--~~~~~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~-~l~~~  457 (467)
T 3dbg_A          391 RAA--NVPKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSNDAVRVGITLRPH-DLLVR  457 (467)
T ss_dssp             HHT--TSCTTSCCSSCSSSSSCTTHHHHHHHHHHHHHHHHHHEEEEECTTCEEEEEESSSEEEE-ECEEE
T ss_pred             ccc--cCCCccccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceeEeCCCCCCccceeeEecCC-CCccc
Confidence            432  12236899999999999999999999999999999999999988765555556777776 44443


No 19 
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00  E-value=3e-71  Score=552.11  Aligned_cols=393  Identities=19%  Similarity=0.303  Sum_probs=309.6

Q ss_pred             ccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCC-cccCCCCCc-cccc-ccc-ceeecC-CcchhHHHh
Q 046539           76 PRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHD-IFQKPKGNS-LGKL-VVN-GMVTYE-GEQWSKVRK  150 (484)
Q Consensus        76 ~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~-~~~~~~~~~-~~~~-~g~-~~~~~~-~~~~~~~R~  150 (484)
                      ++++..+.+|+++||+||++++|+.++|+++||+++++++.++. .|++++... .... .+. ++++.+ |+.|+++|+
T Consensus        43 ~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~l~~~~~g~~w~~~Rr  122 (496)
T 3qz1_A           43 PNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLLWKAHKK  122 (496)
T ss_dssp             SCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTTTTTSCTTCCCSSSSCCSHHHHHHHH
T ss_pred             CcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcchHHHhcCCCCceEECCCCHHHHHHHH
Confidence            46777899999999999999999999999999999999998775 677655433 2222 244 788888 999999999


Q ss_pred             hhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHHHHHHHhCCCccchhH---HHHHHHH
Q 046539          151 IANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHIQALAADVISRTAFGSNYDDGRK---IFELIRE  227 (484)
Q Consensus       151 ~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~---~~~~~~~  227 (484)
                      ++++.|+.+.++.+++.+.++++++++.|.+.     .+.++|+.+++..+++|+++.++||.  .++.+   +.+....
T Consensus       123 ~~~~~f~~~~~~~~~~~i~~~~~~l~~~l~~~-----~~~~vd~~~~~~~~~~dvi~~~~fG~--~~~~~~~~~~~~~~~  195 (496)
T 3qz1_A          123 LTRSALLLGTRSSMEPWVDQLTQEFCERMRVQ-----AGAPVTIQKEFSLLTCSIICYLTFGN--KEDTLVHAFHDCVQD  195 (496)
T ss_dssp             HHHHHHHC--CCCHHHHHHHHHHHHHHHHHTT-----CSCCCHHHHHHTHHHHHHTTTTSTTC--CCHHHHHHHHHHHHT
T ss_pred             HHHHHHhhccHhhHHHHHHHHHHHHHHHHHhc-----CCCccCHHHHHHHHHHHHHHHHhcCC--CCChHHHHHHHHHHH
Confidence            99999997777889999999999999999752     45689999999999999999999998  22222   2222222


Q ss_pred             HHHHHHh--h------hcccccch--hH-----------------HHHHHh-ccCCchhHHHHHHHhhhHhhHHh-hcCC
Q 046539          228 QSHLFIE--V------SQFDYIPG--WR-----------------EEALRI-GKASNDDLLGLLMESNYKEIQEK-EAGM  278 (484)
Q Consensus       228 ~~~~~~~--~------~~~~~~p~--~~-----------------~~~~~~-~~~~~~~~l~~ll~~~~~~~~~~-~~~l  278 (484)
                      .......  .      ....++|.  ..                 ++..+. .....+|+++.+++...+...+. .+.+
T Consensus       196 ~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~l  275 (496)
T 3qz1_A          196 LMKTWDHWSIQILDMVPFLRFFPNPGLWRLKQAIENRDHMVEKQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQL  275 (496)
T ss_dssp             TTTTTSSHHHHHHHHCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCCSSSHHHHTTSSTTCCC-----CC
T ss_pred             HHHHhccchhHHHHhHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccchHHHHHHHHHhccccCCcccc
Confidence            2111110  0      01122231  11                 011111 11245689999987654321111 1268


Q ss_pred             CHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCC-----CCCChhhhccChhHHHHHHHhhcC
Q 046539          279 SIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGN-----KEPKFDELNRLKMVGKIIYEVFRI  353 (484)
Q Consensus       279 ~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~-----~~~~~~~~~~lp~l~a~i~E~lRl  353 (484)
                      +++++.+++.++++||+|||+++++|++++|++||++|+++++|++++++.     +.+ ++++++|||++|||+|+||+
T Consensus       276 ~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~-~~~~~~lpyl~a~i~E~lRl  354 (496)
T 3qz1_A          276 LEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVT-YKDRARLPLLNATIAEVLRL  354 (496)
T ss_dssp             CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCSSSSSSCCS-TTGGGSCHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCcccCCCC-hhhhhcCcHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999999973     446 89999999999999999999


Q ss_pred             CCCccc-ccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCc
Q 046539          354 YSPAYL-IFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRIC  432 (484)
Q Consensus       354 ~p~~~~-~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C  432 (484)
                      +|+++. ++|++++|++++||.|||||.|.++.+++||||++| +||++|+||||++++    . . ..++|||.|+|.|
T Consensus       355 ~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeR~l~~~----~-~-~~~~pFg~G~r~C  427 (496)
T 3qz1_A          355 RPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVW-EQPHEFRPDRFLEPG----A-N-PSALAFGCGARVC  427 (496)
T ss_dssp             SCSSSSCCCEECSSCEECSSSEECTTCEEEECHHHHTTCTTTS-SSTTSCCCCCCC-------C-C-CCCCSSCCSSSSC
T ss_pred             cCCcccccCccCCCCceECCEEeCCCCEEEechHHhhCChhhc-CCcccCCcccccCCC----C-C-cCccCCCCCCCCC
Confidence            999997 789999999999999999999999999999999999 999999999999753    1 2 4799999999999


Q ss_pred             cchHHHHHHHHHHHHHHHHhcEEEeCCCcc---cCCC--CcceeccCCCcceeeecC
Q 046539          433 IGQNFALMEVKLALAMILQNFSFQLSPTYV---HAPS--SGITVYPQHGAHMILNKL  484 (484)
Q Consensus       433 ~G~~la~~~~~~~l~~ll~~f~~~~~~~~~---~~~~--~~~~~~~~~~~~v~~~~~  484 (484)
                      +|++||++|++++++.|+++|+++++++..   ....  .+.+..|+ +++|+++||
T Consensus       428 ~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~R  483 (496)
T 3qz1_A          428 LGESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKVQ-PFQVRLQPR  483 (496)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHCCCCCCTTCCCCCSCCSCCCSSCCCCC-CCCCCCCCC
T ss_pred             ccHHHHHHHHHHHHHHHHHhcEEeCCCCCCCCCCCcccCcceEecCC-ceEEEEEEe
Confidence            999999999999999999999999875421   1222  35566665 899999987


No 20 
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00  E-value=7.3e-70  Score=535.55  Aligned_cols=405  Identities=18%  Similarity=0.293  Sum_probs=332.5

Q ss_pred             cCCCCCCC-CCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhC-CceEEeeCCcCeEEeCCHHHHHHHHh
Q 046539           39 QGFSGNSY-KIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYG-KKSFKWMGPRPSINVQDPKLIREILL  116 (484)
Q Consensus        39 ~~~Pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG-~vf~~~~~~~~~vvv~dp~~i~~vl~  116 (484)
                      +.||||++ +|++||++++.+                  +++.++.+++++|| +||++++++.++|+++||+++++++.
T Consensus         3 ~~PPg~p~~~P~iG~~~~~~~------------------~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~   64 (450)
T 3gw9_A            3 KLPPVYPVTVPILGHIIQFGK------------------SPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFL   64 (450)
T ss_dssp             SCCCBCCCCSTTTBTHHHHHH------------------CHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHS
T ss_pred             CCCCCCCCCcchhccHHHHcc------------------CHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHh
Confidence            46899766 999999999864                  56778999999999 99999999999999999999999998


Q ss_pred             hCC-cccCCCCCc-cccccccceee-cCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHH-HHHHHHhcCCCCccc
Q 046539          117 KHD-IFQKPKGNS-LGKLVVNGMVT-YEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIR-KLFEIAASDEESFEL  192 (484)
Q Consensus       117 ~~~-~~~~~~~~~-~~~~~g~~~~~-~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~-~l~~~~~~~~~~~~v  192 (484)
                      ++. .++.++.+. ...++|.++++ .+++.|+++|+++.+.|+.++++.+.+.+.++++++++ .|.+      .++.+
T Consensus        65 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~------~~~~v  138 (450)
T 3gw9_A           65 PRNEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAIQHEVRKFMAANWDK------DEGEI  138 (450)
T ss_dssp             SCTTTEESTGGGGGGHHHHCTTSGGGSCHHHHHHHHHHHHHTTSGGGCTTHHHHHHHHHHHHHHHHSCS------SEEEE
T ss_pred             CChhhccchhhHHHHHHHhcCCcccCCCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcc------CCCcc
Confidence            765 677666544 45566777655 57999999999999999999999999999999999988 5532      34579


Q ss_pred             chHHHHHHHHHHHHHHHHhCCCccch---hHHHHHHHHHHHHHHhhhcccccchh------H------------------
Q 046539          193 DIWPHIQALAADVISRTAFGSNYDDG---RKIFELIREQSHLFIEVSQFDYIPGW------R------------------  245 (484)
Q Consensus       193 dl~~~~~~~~~~~i~~~~fG~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~------~------------------  245 (484)
                      |+.+++..+++++++.++||.++...   .++...+..+......  ...++|.+      .                  
T Consensus       139 d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~  216 (450)
T 3gw9_A          139 NLLEDCSTMIINTACQCLFGEDLRKRLDARRFAQLLAKMESSLIP--AAVFLPILLKLPLPQSARCHEARTELQKILSEI  216 (450)
T ss_dssp             EHHHHHHHHHHHHHHHHHSCHHHHHHSCHHHHHHHHHHHHHTCCG--GGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHcCcchhhhhhhHHHHHHHHHHHhcccc--chhcccchhccCCchhHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999876432   2333333322211111  11122211      0                  


Q ss_pred             -HHHHHh---ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHh--cChHHHHHH
Q 046539          246 -EEALRI---GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLC--MHPIWQERA  319 (484)
Q Consensus       246 -~~~~~~---~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~--~~p~~~~~l  319 (484)
                       ++..+.   ......|+++.+++...++    +..++++++.+++..+++||+|||+++++|++++|+  .||++|+++
T Consensus       217 i~~r~~~~~~~~~~~~d~l~~ll~~~~~~----~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l  292 (450)
T 3gw9_A          217 IIARKEEEVNKDSSTSDLLSGLLSAVYRD----GTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEAL  292 (450)
T ss_dssp             HHHHHHHHHHTSCCCCSHHHHHHHCBCTT----SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHH
T ss_pred             HHHHHHhhcccCCccchHHHHHHHhhccC----CCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHH
Confidence             011111   1234578999998865432    345899999999999999999999999999999999  999999999


Q ss_pred             HHHHHHHhCCCCCChhhh-ccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCCeEEechhhhhcCCCCccCC
Q 046539          320 RQEVFQVLGNKEPKFDEL-NRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDD  398 (484)
Q Consensus       320 ~~Ei~~~~~~~~~~~~~~-~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~  398 (484)
                      ++|++++  ...++++++ ++|||++|||+|+||++|+++.++|++++|++++||.|||||.|.++.+++||||++| +|
T Consensus       293 ~~Ei~~~--~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~d  369 (450)
T 3gw9_A          293 RKEIEEF--PAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAF-PE  369 (450)
T ss_dssp             HHHHTTC--CSSCCHHHHHHHCHHHHHHHHHHHHHSCSCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTS-SS
T ss_pred             HHHHHhc--cCCCChHHHHHhcHHHHHHHHHHHHhCCchhccccccccccccCCEEECCCCEEEEChHHhhCChhhc-CC
Confidence            9999988  566899999 9999999999999999999999889999999999999999999999999999999999 99


Q ss_pred             CCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCC-CCcceeccC-CC
Q 046539          399 AKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAP-SSGITVYPQ-HG  476 (484)
Q Consensus       399 p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~-~~~~~~~~~-~~  476 (484)
                      |++|+|||+..       .+ ..++|||.|+|.|+|++||++|++++++.|+++|+|+++++..+.+ ..+.+..|+ .+
T Consensus       370 p~~F~PeR~~~-------~~-~~~~~Fg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~p~~~~  441 (450)
T 3gw9_A          370 PRRWDPERDEK-------VE-GAFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQ  441 (450)
T ss_dssp             TTSCCTTCCCS-------ST-TCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHEEEEESSSSCCCEETTSSSCEECGGG
T ss_pred             ccccCCCcCcC-------CC-CceeCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEecCCCCCCCccccceecCCCCc
Confidence            99999999322       12 6899999999999999999999999999999999999986533222 345677888 89


Q ss_pred             cceeeecC
Q 046539          477 AHMILNKL  484 (484)
Q Consensus       477 ~~v~~~~~  484 (484)
                      ++|++++|
T Consensus       442 ~~v~~~~R  449 (450)
T 3gw9_A          442 CRVKYIRR  449 (450)
T ss_dssp             CEEEEEEC
T ss_pred             eEeEeeec
Confidence            99999997


No 21 
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00  E-value=4.4e-69  Score=530.54  Aligned_cols=392  Identities=25%  Similarity=0.425  Sum_probs=322.0

Q ss_pred             cccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCCcccCCCC-Cc-c-----ccccccceee-cCCcchhHH
Q 046539           77 RILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHDIFQKPKG-NS-L-----GKLVVNGMVT-YEGEQWSKV  148 (484)
Q Consensus        77 ~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~-~~-~-----~~~~g~~~~~-~~~~~~~~~  148 (484)
                      .++..+.+|+++|||||++++++.+.|+++||+++++++.++ .+.+.+. +. .     ..++|.++++ .+|+.|+++
T Consensus        11 ~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~   89 (456)
T 3mdm_A           11 VLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMST-KYNKDSKMYRALQTVFGERLFGQGLVSECNYERWHKQ   89 (456)
T ss_dssp             CHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTCT-TSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHHHHH
T ss_pred             hHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhhc-cccccchhHHHHHHhhcccccCCCcccCCChHHHHHH
Confidence            356788999999999999999999999999999999999753 3444332 11 1     2245667665 589999999


Q ss_pred             HhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHHHHHHHhCCCccch----hHHHHH
Q 046539          149 RKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHIQALAADVISRTAFGSNYDDG----RKIFEL  224 (484)
Q Consensus       149 R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~----~~~~~~  224 (484)
                      |+++++.|+.++++.+++.+.++++.+++.|.+..+   ++..+|+.+++..+++|+++.++||.+++..    .++...
T Consensus        90 Rr~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~---~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~  166 (456)
T 3mdm_A           90 RRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKAD---GQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQA  166 (456)
T ss_dssp             HHHHGGGGSHHHHHTTHHHHHHHHHHHHHHHHHTCS---SSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTCCHHHHHH
T ss_pred             HhhcccccCHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcccccHHHHH
Confidence            999999999999999999999999999999986422   4468999999999999999999999987542    233333


Q ss_pred             HHHHHHHHHh--hhcccccchhH---------------------HHHH---HhccCCchhHHHHHHHhhhHhhHHhhcCC
Q 046539          225 IREQSHLFIE--VSQFDYIPGWR---------------------EEAL---RIGKASNDDLLGLLMESNYKEIQEKEAGM  278 (484)
Q Consensus       225 ~~~~~~~~~~--~~~~~~~p~~~---------------------~~~~---~~~~~~~~~~l~~ll~~~~~~~~~~~~~l  278 (484)
                      ...+...+..  .....++|...                     ++..   ..+.....|+++.+++..       ++.+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~-------~~~~  239 (456)
T 3mdm_A          167 VKLMLEGITASRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAE-------EGAQ  239 (456)
T ss_dssp             HHHHHHHHHHHHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHHT-------SSCS
T ss_pred             HHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHHHHhc-------CCCC
Confidence            3333222211  11122344321                     0011   112223568999888753       2357


Q ss_pred             CHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhC-CCCCChhhhccChhHHHHHHHhhcCCCCc
Q 046539          279 SIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLG-NKEPKFDELNRLKMVGKIIYEVFRIYSPA  357 (484)
Q Consensus       279 ~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~-~~~~~~~~~~~lp~l~a~i~E~lRl~p~~  357 (484)
                      +++++.+++..+++||+|||+++++|++++|++||++|+++++|++++++ ++.++++++++|||++|||+|+||++|++
T Consensus       240 ~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~  319 (456)
T 3mdm_A          240 DDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPPA  319 (456)
T ss_dssp             SSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCSSCCHHHHHHCHHHHHHHHHHHHHCCSS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCCCCHHHHhcCHHHHHHHHHHHHhCCCc
Confidence            89999999999999999999999999999999999999999999999998 56789999999999999999999999999


Q ss_pred             ccccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHH
Q 046539          358 YLIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNF  437 (484)
Q Consensus       358 ~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~l  437 (484)
                      +.+.|++++|++++||.|||||.|.++.+++||||++| +||++|+||||+++..    .+...++|||.|+|.|+|++|
T Consensus       320 ~~~~r~~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeRfl~~~~----~~~~~~~pFg~G~r~C~G~~l  394 (456)
T 3mdm_A          320 WGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYF-EDPLTFNPDRFGPGAP----KPRFTYFPFSLGHRSCIGQQF  394 (456)
T ss_dssp             CCEEEEECSCEEETTEEECSSEEEEECHHHHHTCTTTS-SSTTSCCGGGGSTTSC----CCSSSCCTTCCGGGSCTTHHH
T ss_pred             cccccccCCceeECCEEECCCCEEEeehHHhcCCchhc-CCccccCccccCCCCC----CCCCcccCCCCCCcCCCCHHH
Confidence            99889999999999999999999999999999999999 9999999999997531    123679999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcEEEeCCCcccCCCCcceeccCCCcceeeecC
Q 046539          438 ALMEVKLALAMILQNFSFQLSPTYVHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       438 a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      |++|++++++.|+++|+|+++++.........++.|+++++|++++|
T Consensus       395 A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r  441 (456)
T 3mdm_A          395 AQMEVKVVMAKLLQRLEFRLVPGQRFGLQEQATLKPLDPVLCTLRPR  441 (456)
T ss_dssp             HHHHHHHHHHHHHHHEEEEECTTCCCCEEESSSEEESSCCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHhCeEEeCCCCcceeecceEEecCCCeEEEEEEc
Confidence            99999999999999999999887655445567789999999999987


No 22 
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00  E-value=2.3e-69  Score=533.11  Aligned_cols=411  Identities=18%  Similarity=0.292  Sum_probs=332.4

Q ss_pred             hcCCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHh
Q 046539           38 QQGFSG-NSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILL  116 (484)
Q Consensus        38 ~~~~Pg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~  116 (484)
                      .+.||| |+++|++||++++.+                  +++.++.+++++||+||++++++.+.|+++|++++++++.
T Consensus        10 ~~~PPg~P~~lP~iG~l~~~~~------------------~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~   71 (461)
T 3i3k_A           10 VKSPPYIFSPIPFLGHAIAFGK------------------SPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFN   71 (461)
T ss_dssp             CCCCCBCCCSSTTTBTHHHHHH------------------CHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHH
T ss_pred             CCCCCCCCCCCCccccHHhhcc------------------CHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHh
Confidence            347899 888999999999864                  5677999999999999999999999999999999999998


Q ss_pred             hCC-cccCCCCCc--cccccccceeec-CCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCccc
Q 046539          117 KHD-IFQKPKGNS--LGKLVVNGMVTY-EGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFEL  192 (484)
Q Consensus       117 ~~~-~~~~~~~~~--~~~~~g~~~~~~-~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~v  192 (484)
                      ++. .+++...+.  ...++|.+++.. +|+.|+++|+++.+.|+...++++.+.+.++++++++.|.       ....+
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~g~g~~~~~~g~~w~~~Rr~~~~~f~~~~l~~~~~~~~~~~~~ll~~l~-------~~~~~  144 (461)
T 3i3k_A           72 SKNEDLNAEDVYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEYFESWG-------ESGEK  144 (461)
T ss_dssp             CCTTTEESHHHHHHHHHHHHCTTSGGGSCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHGGGGC-------SEEEE
T ss_pred             ccccccccchHHHHhhhhhcCCeeeeCCCcHHHHHHHHHHhhhhCHHHHHHHHHHHHHHHHHHHHHhh-------hcCCc
Confidence            765 555543322  344567787664 6999999999999999999999999999999999998875       33468


Q ss_pred             chHHHHHHHHHHHHHHHHhCCCccch--hHHHHHHHHHHHHHHhh--hcccccc--hhH-------------HHHHHh--
Q 046539          193 DIWPHIQALAADVISRTAFGSNYDDG--RKIFELIREQSHLFIEV--SQFDYIP--GWR-------------EEALRI--  251 (484)
Q Consensus       193 dl~~~~~~~~~~~i~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~p--~~~-------------~~~~~~--  251 (484)
                      |+.+.+..+++++++.++||.++...  .........+...+...  ....++|  .+.             .+.++.  
T Consensus       145 dl~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~  224 (461)
T 3i3k_A          145 NVFEALSELIILTASHCLHGKEIRSQLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRR  224 (461)
T ss_dssp             EHHHHHHHHHHHHHHHHHTCHHHHHTCCHHHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHHHHccHhhhhHHHHHHHHHHHHHHhccccchhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999765321  22222222222111110  0112222  121             111111  


Q ss_pred             -ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCC
Q 046539          252 -GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNK  330 (484)
Q Consensus       252 -~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~  330 (484)
                       .....+|+++.+++...++    +..++++++..++..+++||+|||+++++|++++|++||++|+++++|++++++..
T Consensus       225 ~~~~~~~d~l~~ll~~~~~~----~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~  300 (461)
T 3i3k_A          225 QSQEKIDDILQTLLDATYKD----GRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGEN  300 (461)
T ss_dssp             TCCCCCCSHHHHHHTCBCTT----SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTT
T ss_pred             hcccccccHHHHHHHhhhcc----CCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCC
Confidence             1224578999998765432    34589999999999999999999999999999999999999999999999999854


Q ss_pred             --CCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCC
Q 046539          331 --EPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFS  408 (484)
Q Consensus       331 --~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l  408 (484)
                        .+++++++++||++|||+|+||++|+++.++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||+
T Consensus       301 ~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~Rfl  379 (461)
T 3i3k_A          301 LPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSW-VERLDFNPDRYL  379 (461)
T ss_dssp             CCCCCHHHHHTCHHHHHHHHHHHHHSCSCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTC-TTTTCCCGGGGG
T ss_pred             CCCCCHHHHhcChHHHHHHHHHHhcCCCccccccccCCCccCCCEEECCCCEEEEChHHhcCCcccC-CCcccCCCCCCC
Confidence              45899999999999999999999999988999999999999999999999999999999999999 899999999999


Q ss_pred             CcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCC-CCcceeccCCCccee
Q 046539          409 EGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAP-SSGITVYPQHGAHMI  480 (484)
Q Consensus       409 ~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~-~~~~~~~~~~~~~v~  480 (484)
                      +..... ..+ ..|+|||+|+|.|+|++||++|++++++.|+++|+|+++++..+.. ....+..|.+++.|.
T Consensus       380 ~~~~~~-~~~-~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~  450 (461)
T 3i3k_A          380 QDNPAS-GEK-FAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPENPVIRY  450 (461)
T ss_dssp             SCCHHH-HSS-SSSCTTCCGGGCCSCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSSCEEEE
T ss_pred             CCCCCC-CCC-cceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeEEeCCCCCCCcccceeecCCCCceEEe
Confidence            865432 223 6899999999999999999999999999999999999988754433 334566788776664


No 23 
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00  E-value=6.1e-66  Score=513.13  Aligned_cols=419  Identities=20%  Similarity=0.208  Sum_probs=315.1

Q ss_pred             CCCCCCC-CCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhC
Q 046539           40 GFSGNSY-KIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKH  118 (484)
Q Consensus        40 ~~Pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~  118 (484)
                      .+|||++ +|++||++++.+                  +++.++.+++++||+||++++|+.++++|+||+++++++.++
T Consensus        14 ~pPgp~~~~P~iG~~~~~~~------------------~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~   75 (491)
T 3dax_A           14 EPPLENGLIPYLGCALQFGA------------------NPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHG   75 (491)
T ss_dssp             CCCEEEEEESCTTTTGGGTC------------------CHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCC
T ss_pred             CCCcCCCcccchhhHHHHhh------------------CHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCC
Confidence            5789888 899999987732                  567789999999999999999999999999999999999765


Q ss_pred             CcccCCCCC--cccccccccee-ecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchH
Q 046539          119 DIFQKPKGN--SLGKLVVNGMV-TYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIW  195 (484)
Q Consensus       119 ~~~~~~~~~--~~~~~~g~~~~-~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~  195 (484)
                      ..++.....  .....+|.+++ ..+++.|+++|+.+.+.|+.++++.+.+.+.+.+.++++..............+++.
T Consensus        76 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~r~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~  155 (491)
T 3dax_A           76 KYFDWKKFHFATSAKAFGHRSIDPMDGNTTENINDTFIKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMY  155 (491)
T ss_dssp             TTEESSHHHHHHHHHHHTCCCCCGGGTSBCCCHHHHHHHHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHH
T ss_pred             ccCChHHHHHHHHHHHcCCCcccccchhHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHH
Confidence            433332211  13345566766 678999999999999999998888888888887777766543211000123467899


Q ss_pred             HHHHHHHHHHHHHHHhCCCccchhHHHHHHHHHHHHH---Hhhh--cccccchhH-------HH--------HHHhccCC
Q 046539          196 PHIQALAADVISRTAFGSNYDDGRKIFELIREQSHLF---IEVS--QFDYIPGWR-------EE--------ALRIGKAS  255 (484)
Q Consensus       196 ~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~p~~~-------~~--------~~~~~~~~  255 (484)
                      ..+..+++++++..+||.+....++......++...+   ....  ....+|.+.       ..        ........
T Consensus       156 ~~~~~~i~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (491)
T 3dax_A          156 SFCYRVMFEAGYLTIFGRDLTRRDTQKAHILNNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKRES  235 (491)
T ss_dssp             HHHHHHHHHHHHHHHHCBCSTTGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGSHHHHHHHHHHHHHTSHHHHTTCBS
T ss_pred             HHHHHHHHHHhHHHHcCcccccccchhhhhhHHHHHHHHHHHHhHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHhhcccc
Confidence            9999999999999999987654322211122111111   1100  111233221       00        01111223


Q ss_pred             chhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCC-----
Q 046539          256 NDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNK-----  330 (484)
Q Consensus       256 ~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~-----  330 (484)
                      ..|+++.+++...+     .+.++++++.++++.+++||+|||+++++|++++|++||++|+++++||++++++.     
T Consensus       236 ~~d~l~~ll~~~~~-----~~~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~  310 (491)
T 3dax_A          236 ISELISLRMFLNDT-----LSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVS  310 (491)
T ss_dssp             CCHHHHHHHHHHHH-----HBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHTTTCCCC
T ss_pred             hhHHHHHHHHHHHh-----cCCChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhccccccc
Confidence            56888888765432     23578999999999999999999999999999999999999999999999998732     


Q ss_pred             ------CCChhhhccChhHHHHHHHhhcCCCCccccccccccccee----cCEEeCCCCeEEechhhhhcCCCCccCCCC
Q 046539          331 ------EPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKL----GDFILPPGVLLSLPIILVHHDHEYWGDDAK  400 (484)
Q Consensus       331 ------~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i----~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~  400 (484)
                            .++++++++||||+|||+||||++| ++.++|.+.+|+++    +||.|||||.|.++.+++||||++| +||+
T Consensus       311 ~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p-~~~~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~  388 (491)
T 3dax_A          311 LEGNPICLSQAELNDLPVLDSIIKESLRLSS-ASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIY-PDPL  388 (491)
T ss_dssp             SSSCCCCCCHHHHHCCHHHHHHHHHHHHHHE-EECEEEEESSSEEEEETTEEEEECTTCEEEECTHHHHTCTTTS-SSTT
T ss_pred             cCCCccccCHHHHhcCHHHHHHHHHHHhcCC-CccceeEecCCeEeecCCCcEEeCCCCEEEechHhhcCCcccC-CCHH
Confidence                  3589999999999999999999997 46788999999999    7899999999999999999999999 9999


Q ss_pred             CCCCCCCCCcchhhh-------cCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCC--C---Cc
Q 046539          401 AFNPDRFSEGVSKAA-------KNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAP--S---SG  468 (484)
Q Consensus       401 ~F~P~R~l~~~~~~~-------~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~--~---~~  468 (484)
                      +|+||||++.++...       ......|+|||+|+|+|+|++||++|++++++.||++|+|++.++....+  .   .+
T Consensus       389 ~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~  468 (491)
T 3dax_A          389 TFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAG  468 (491)
T ss_dssp             SCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTTCCCCCBCGGGTB
T ss_pred             HcCCccccCCCccccccccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCCCCCCCCCccccc
Confidence            999999996432210       11226899999999999999999999999999999999999976532111  1   23


Q ss_pred             -ceeccCCCcceeeec
Q 046539          469 -ITVYPQHGAHMILNK  483 (484)
Q Consensus       469 -~~~~~~~~~~v~~~~  483 (484)
                       .+..|..+++|+++.
T Consensus       469 ~~~~~p~~~~~~~~r~  484 (491)
T 3dax_A          469 LGILPPLNDIEFKYKF  484 (491)
T ss_dssp             EEECCBSSCCEEEEEE
T ss_pred             ccccCCCCCceEEEEe
Confidence             245788888888764


No 24 
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00  E-value=5.3e-65  Score=495.91  Aligned_cols=385  Identities=17%  Similarity=0.232  Sum_probs=299.3

Q ss_pred             hcCCCCCCCCCCCCCHHH-HHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEee-CCcCeEEeCCHHHHHHHH
Q 046539           38 QQGFSGNSYKIFHGDTKD-MSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWM-GPRPSINVQDPKLIREIL  115 (484)
Q Consensus        38 ~~~~Pgp~~~p~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~-~~~~~vvv~dp~~i~~vl  115 (484)
                      ++++|||+++|++|++.. +..                  +++.++.++ ++|||||++++ ++.++|+++||+++++++
T Consensus        25 ~~~~PGP~~~p~lG~~~~~~~~------------------~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl   85 (436)
T 2cd8_A           25 QQGTTASPPVLDLGALGQDFAA------------------DPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVL   85 (436)
T ss_dssp             ---------CCBHHHHHHHHHH------------------CCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHH
T ss_pred             ccCCCCCCccccCCCCCccccc------------------ChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHH
Confidence            348999999999999863 322                  678899999 99999999998 778899999999999999


Q ss_pred             hhCCcccCCCCC--c-cc---cccccceeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCC
Q 046539          116 LKHDIFQKPKGN--S-LG---KLVVNGMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEES  189 (484)
Q Consensus       116 ~~~~~~~~~~~~--~-~~---~~~g~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~  189 (484)
                      .++ .|++++..  . ..   ...+.++++.+|+.|+++|+++.+.|++++++.+++.+.+.++++++.|.+.     .+
T Consensus        86 ~~~-~f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-----~~  159 (436)
T 2cd8_A           86 ADP-RFSKDWRNSTTPLTEAEAALNHNMLESDPPRHTRLRKLVAREFTMRRVELLRPRVQEIVDGLVDAMLAA-----PD  159 (436)
T ss_dssp             HCT-TEECCGGGCSSCCCTTGGGTCCSGGGCCTTHHHHHHHHHGGGSSHHHHHTTHHHHHHHHHHHHHHHHTC-----TT
T ss_pred             cCC-CCcccccccccccccccccccccccccCchHHHHHHHHhHHhhCHHHHHHHHHHHHHHHHHHHHHHHhc-----cC
Confidence            876 56665431  1 11   3346678889999999999999999999999999999999999999999741     24


Q ss_pred             cccchHHHH-HHHHHHHHHHHHhCCCccchhHHHHHHHHHHHHHHhhhcccc------cchhHHHHHHh-ccCCchhHHH
Q 046539          190 FELDIWPHI-QALAADVISRTAFGSNYDDGRKIFELIREQSHLFIEVSQFDY------IPGWREEALRI-GKASNDDLLG  261 (484)
Q Consensus       190 ~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~p~~~~~~~~~-~~~~~~~~l~  261 (484)
                      +.+|+..++ ..+++++++. +||.+.++.+++..+...+....   .....      +-.+..+.++. .....+|+++
T Consensus       160 ~~vd~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~  235 (436)
T 2cd8_A          160 GRADLMESLAWPLPITVISE-LLGVPEPDRAAFRVWTDAFVFPD---DPAQAQTAMAEMSGYLSRLIDSKRGQDGEDLLS  235 (436)
T ss_dssp             SCEEHHHHTTTHHHHHHHHH-HHTCCGGGHHHHHHHHHHHHSCS---STTHHHHHHHHHHHHHHHHHHHHTTSCCCSHHH
T ss_pred             CCcchHHHHHHHHHHHHHHH-HhCCCHHHHHHHHHHHHHHhccC---CHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHH
Confidence            579999877 5799999998 79998765444444433332110   00000      00000111221 1223568999


Q ss_pred             HHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccCh
Q 046539          262 LLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLK  341 (484)
Q Consensus       262 ~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp  341 (484)
                      .|++...+    .+..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+                 +
T Consensus       236 ~ll~~~~~----~~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~-----------------~  294 (436)
T 2cd8_A          236 ALVRTSDE----DGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADM-----------------T  294 (436)
T ss_dssp             HHHHHHHH----CTTTSCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCG-----------------G
T ss_pred             HHHHhhhc----cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhCh-----------------h
Confidence            99876432    13468999999999999999999999999999999999999999999983                 5


Q ss_pred             hHHHHHHHhhcCCCCcc-cccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCC
Q 046539          342 MVGKIIYEVFRIYSPAY-LIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEV  420 (484)
Q Consensus       342 ~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~  420 (484)
                      |++|||+|+||++|+++ .++|.+++|++++||.||||+.|.++.+++||||++| +||++|+||||-           .
T Consensus       295 ~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~  362 (436)
T 2cd8_A          295 LLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERF-PDPHRFDIRRDT-----------A  362 (436)
T ss_dssp             GHHHHHHHHHHHHCSBSSCCCBEESSCEEETTEEECTTCCEEECHHHHTTCTTTS-SSTTSCCTTSCC-----------T
T ss_pred             hHHHHHHHHHHhcCcccCceeEEeCCCeEECCEEECCCCEEEeChHHhCCCcccC-CCccccCCCCCC-----------C
Confidence            89999999999999999 6999999999999999999999999999999999999 999999999951           4


Q ss_pred             cccccCCCCCCccchHHHHHHHHHHHHHHHHhc-EEEeCCC-cccCCCCcceeccCCCcceeeecC
Q 046539          421 SFFPFGGGPRICIGQNFALMEVKLALAMILQNF-SFQLSPT-YVHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       421 ~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      .++|||.|+|.|+|++||++|++++++.|+++| +++++.+ .......+.++++..+++|+++||
T Consensus       363 ~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r  428 (436)
T 2cd8_A          363 GHLAFGHGIHFCIGAPLARLEARIAVRALLERCPDLALDVSPGELVWYPNPMIRGLKALPIRWRRG  428 (436)
T ss_dssp             TCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHSCTTCCBCSCGGGCCBCCCTTBCCBSCCEEC----
T ss_pred             CCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCceecCCCccceeccCcccCCcceeEEEEecC
Confidence            689999999999999999999999999999999 6998632 233334455667888999999987


No 25 
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00  E-value=2.2e-65  Score=508.72  Aligned_cols=417  Identities=19%  Similarity=0.210  Sum_probs=326.3

Q ss_pred             cCCCCCCC-CCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhh
Q 046539           39 QGFSGNSY-KIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLK  117 (484)
Q Consensus        39 ~~~Pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~  117 (484)
                      +.||||++ +|++||++.+..                  +++.++.+++++|||||++++++.++++|+||+++++++.+
T Consensus        13 ~~PPgp~~~lPliG~~~~~~~------------------~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~   74 (491)
T 3v8d_A           13 GEPPLENGLIPYLGCALQFGA------------------NPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCH   74 (491)
T ss_dssp             TSCCEEEEEESSTTTTGGGTC------------------CHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSC
T ss_pred             CCCCCCCCCcceeccHHHHhc------------------CHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhc
Confidence            37899999 699999998742                  78889999999999999999999999999999999999977


Q ss_pred             CCcccCCCCC--cccccccccee-ecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccch
Q 046539          118 HDIFQKPKGN--SLGKLVVNGMV-TYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDI  194 (484)
Q Consensus       118 ~~~~~~~~~~--~~~~~~g~~~~-~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl  194 (484)
                      ++.++.....  ....++|.+.+ ..+|+.|+++|+++.+.|++++++.+.+.+.++++++++.+.....+.......++
T Consensus        75 ~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~Rr~~~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l  154 (491)
T 3v8d_A           75 GKYFDWKKFHFALSAKAFGHRSIDPMDGNTTENINDTFIKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGM  154 (491)
T ss_dssp             CTTEESSHHHHHHHHHHHTCCCCCGGGSSBCCCHHHHHHHHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEH
T ss_pred             CCccchHHHHHHHHHHhcCCcccccccchhHHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCH
Confidence            6534433321  24556666644 45899999999999999999999999999999999988854322111112456899


Q ss_pred             HHHHHHHHHHHHHHHHhCCCccchhH----HHHHHHHH---HHHHHhhhcccccchhH---------------HHHHHhc
Q 046539          195 WPHIQALAADVISRTAFGSNYDDGRK----IFELIREQ---SHLFIEVSQFDYIPGWR---------------EEALRIG  252 (484)
Q Consensus       195 ~~~~~~~~~~~i~~~~fG~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~p~~~---------------~~~~~~~  252 (484)
                      .+++..+++++++..+||.+....++    +.+....+   ...+....  ..+|...               .......
T Consensus       155 ~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~p~~~~~~~~~a~~~l~~~~~~~~~~~  232 (491)
T 3v8d_A          155 YSFCYRVMFEAGYLTIFGRDLTRRDTQKAHILNNLDNFKQFDKVFPALV--AGLPIHMFRTAHNAREKLAESLRHENLQK  232 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHCBCCSCGGGHHHHHHHHHHHHHHHHHHHHHHH--TTCCGGGCHHHHHHHHHHHHHTSHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHcCccccccchhhhhhHHHHHHHHHHHHHHHHHH--hcCChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999998653221    12222222   11111111  1123221               1112222


Q ss_pred             cCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCC---
Q 046539          253 KASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGN---  329 (484)
Q Consensus       253 ~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~---  329 (484)
                      ....+|+++.++....+     .+.++++++..+++.+++||+|||+++++|++++|++||++|+++++||++++++   
T Consensus       233 ~~~~~d~l~~l~~~~~~-----~~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~  307 (491)
T 3v8d_A          233 RESISELISLRMFLNDT-----LSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQ  307 (491)
T ss_dssp             CBSCCHHHHHHHHHHHH-----HBCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTTC
T ss_pred             cccccHHHHHHHHHhhc-----cCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhcccc
Confidence            33467888888765433     3468999999999999999999999999999999999999999999999999862   


Q ss_pred             --------CCCChhhhccChhHHHHHHHhhcCCCCccccccccccccee----cCEEeCCCCeEEechhhhhcCCCCccC
Q 046539          330 --------KEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKL----GDFILPPGVLLSLPIILVHHDHEYWGD  397 (484)
Q Consensus       330 --------~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i----~g~~Ip~G~~v~~~~~~~~~d~~~~g~  397 (484)
                              ..+++++++++||++|||+|+||++| .+.++|.+++|+++    +||.||||+.|.++.+++||||++| +
T Consensus       308 ~~~~~~~~~~~~~~~l~~~~~l~a~i~E~lRl~p-~~~~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~  385 (491)
T 3v8d_A          308 KVSLEGNPICLSQAELNDLPVLDSIIKESLRLSS-ASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIY-P  385 (491)
T ss_dssp             CCCSSSSCCCCCHHHHHCCHHHHHHHHHHHHHHE-EECEEEEESSSEEEECSSCEEEECTTCEEEECTHHHHTCTTTS-S
T ss_pred             ccccccccccCCHHHHhcChHHHHHHHHHhhcCC-CCccceeccCCeeEeecCCcEEeCCCCEEEecchhhcCCcccC-C
Confidence                    35788999999999999999999997 56678999999999    9999999999999999999999999 9


Q ss_pred             CCCCCCCCCCCCcchhhh-------cCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCC-----
Q 046539          398 DAKAFNPDRFSEGVSKAA-------KNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAP-----  465 (484)
Q Consensus       398 ~p~~F~P~R~l~~~~~~~-------~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~-----  465 (484)
                      ||++|+|+||++.++...       ......|+|||+|+|.|+|++||++|++++++.|+++|+|+++++....+     
T Consensus       386 ~p~~F~p~R~~~~~~~~~~~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~  465 (491)
T 3v8d_A          386 DPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQS  465 (491)
T ss_dssp             STTSCCTTTTBCTTSSBCCCCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC---CCCCCBCGG
T ss_pred             CccccCcccccCCCCCcccccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCCCCCCCCCCCcc
Confidence            999999999997543211       11236799999999999999999999999999999999999987632111     


Q ss_pred             -CCcceeccCCCcceeee
Q 046539          466 -SSGITVYPQHGAHMILN  482 (484)
Q Consensus       466 -~~~~~~~~~~~~~v~~~  482 (484)
                       ...+++.|..++.|+++
T Consensus       466 ~~~~~~~~p~~~i~v~~~  483 (491)
T 3v8d_A          466 RAGLGILPPLNDIEFKYK  483 (491)
T ss_dssp             GTBEEECCBSSCCEEEEE
T ss_pred             cCcCcccCCCCCeEEEEE
Confidence             12356778899999875


No 26 
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00  E-value=4e-64  Score=500.65  Aligned_cols=414  Identities=15%  Similarity=0.141  Sum_probs=308.9

Q ss_pred             CCCCCCC-CCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhC
Q 046539           40 GFSGNSY-KIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKH  118 (484)
Q Consensus        40 ~~Pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~  118 (484)
                      .+|||++ +|++||++++..                  +++.++.+++++||+||++++|+.+++|++||+++++++.++
T Consensus        19 ~PPgp~~~~P~iG~~~~~~~------------------~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~   80 (498)
T 3b6h_A           19 EPPLDLGSIPWLGYALDFGK------------------DAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEP   80 (498)
T ss_dssp             CCCEECCSSTTTBTHHHHHH------------------CHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCC
T ss_pred             CCCCCCCCCcchhhHHHhcc------------------CHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCc
Confidence            6899998 899999998864                  457799999999999999999999999999999999999776


Q ss_pred             Cc-ccCCCCC--ccccccccceeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchH
Q 046539          119 DI-FQKPKGN--SLGKLVVNGMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIW  195 (484)
Q Consensus       119 ~~-~~~~~~~--~~~~~~g~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~  195 (484)
                      .. ++..+..  .+...+|.+++..+++.|   |+++.+.|+.+.++.+.+.+.+.+...+.......  ......+++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---rr~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~l~  155 (498)
T 3b6h_A           81 RTRLDFHAYAIFLMERIFDVQLPHYSPSDE---KARMKLTLLHRELQALTEAMYTNLHAVLLGDATEA--GSGWHEMGLL  155 (498)
T ss_dssp             TTTEECCHHHHHHHHHTSCCCCTTCCHHHH---HHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHH--CSSCEEEEHH
T ss_pred             cccCCchhhHHHHHHHHcCCCccccCHHHH---HHHHHHhhchHhHHHHHHHHHHHHHHHHhhccccc--CCCcceecHH
Confidence            52 4433321  134456666666667666   45566688888888887777777777666543221  1133467899


Q ss_pred             HHHHHHHHHHHHHHHhCCCccchh-----HHHHHHHHHHHHHHh---hh---cccccchh-----H---HH-------HH
Q 046539          196 PHIQALAADVISRTAFGSNYDDGR-----KIFELIREQSHLFIE---VS---QFDYIPGW-----R---EE-------AL  249 (484)
Q Consensus       196 ~~~~~~~~~~i~~~~fG~~~~~~~-----~~~~~~~~~~~~~~~---~~---~~~~~p~~-----~---~~-------~~  249 (484)
                      ..+..+++++++..+||.+++..+     +......++...+..   ..   ...+++..     .   +.       ..
T Consensus       156 ~~~~~vi~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (498)
T 3b6h_A          156 DFSYSFLLRAGYLTLYGIEALPRTHESQAQDRVHSADVFHTFRQLDRLLPKLARGSLSVGDKDHMCSVKSRLWKLLSPAR  235 (498)
T ss_dssp             HHHHHHHHHHHHHHHHCBSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHTCHHH
T ss_pred             HHHHHHHHHHHHHhhcCcccccccccchhhHHHhhHHHHHHHHHHHhhHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHH
Confidence            999999999999999998753221     111112222211110   00   01122210     0   00       01


Q ss_pred             HhccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCC
Q 046539          250 RIGKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGN  329 (484)
Q Consensus       250 ~~~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~  329 (484)
                      ........|+++.+++...+     .+.++++++. +++.+++||+|||+++++|++++|++||++|+++++|+++++++
T Consensus       236 ~~~~~~~~d~l~~ll~~~~~-----~~~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~  309 (498)
T 3b6h_A          236 LARRAHRSKWLESYLLHLEE-----MGVSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQ  309 (498)
T ss_dssp             HTTCBSCCHHHHHHHHHHHH-----TTCCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC
T ss_pred             HhccccHHHHHHHHHHHHHh-----CCCCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcc
Confidence            11222456899988865433     1246677777 88889999999999999999999999999999999999999874


Q ss_pred             C--------CCChhhhccChhHHHHHHHhhcCCCCccccccccccccee-----cCEEeCCCCeEEechhh-hhcCCCCc
Q 046539          330 K--------EPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKL-----GDFILPPGVLLSLPIIL-VHHDHEYW  395 (484)
Q Consensus       330 ~--------~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i-----~g~~Ip~G~~v~~~~~~-~~~d~~~~  395 (484)
                      .        .++++++++|||++|||+|+||++|+ +.++|.+.+|+++     +||.|||||.|.++.++ +||||++|
T Consensus       310 ~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~~d~~~~  388 (498)
T 3b6h_A          310 AEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTAA-PFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIY  388 (498)
T ss_dssp             ----------CCTHHHHSCHHHHHHHHHHHHHHBC-BCEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTS
T ss_pred             cCCCCCcccccCHHHHhcCHHHHHHHHHHHhccCC-CcceeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhcCCcccc
Confidence            2        25899999999999999999999985 6788999999998     68999999999999999 99999999


Q ss_pred             cCCCCCCCCCCCCCcchhhh-------cCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCC-C-
Q 046539          396 GDDAKAFNPDRFSEGVSKAA-------KNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAP-S-  466 (484)
Q Consensus       396 g~~p~~F~P~R~l~~~~~~~-------~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~-~-  466 (484)
                       +||++|+||||++.++...       ......++|||+|+|.|+|++||++|++++++.|+++|+|+++++....+ . 
T Consensus       389 -~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~  467 (498)
T 3b6h_A          389 -TDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFD  467 (498)
T ss_dssp             -SSTTSCCTTTTBCTTSSBCCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEESSTTCCCCCBC
T ss_pred             -CChhhcCcccccCCCcccccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeCCCCCCCCCCC
Confidence             9999999999997532210       11126899999999999999999999999999999999999976531111 1 


Q ss_pred             ---Cc-ceeccCCCcceeeecC
Q 046539          467 ---SG-ITVYPQHGAHMILNKL  484 (484)
Q Consensus       467 ---~~-~~~~~~~~~~v~~~~~  484 (484)
                         .+ .+..|..+++|++++|
T Consensus       468 ~~~~~~~~~~p~~~~~~~~~~~  489 (498)
T 3b6h_A          468 LSRYGFGLMQPEHDVPVRYRIR  489 (498)
T ss_dssp             GGGTBSSBCCBSSCCEEEEEEC
T ss_pred             ccccccccCCCCCCccEEEEec
Confidence               23 3457788899998876


No 27 
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00  E-value=8.5e-65  Score=502.76  Aligned_cols=412  Identities=15%  Similarity=0.144  Sum_probs=303.7

Q ss_pred             CCCCCCC-CCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhC
Q 046539           40 GFSGNSY-KIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKH  118 (484)
Q Consensus        40 ~~Pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~  118 (484)
                      .||||++ +|++||++++..                  +++.++.+++++|||||++++++.++++++||+++++++.++
T Consensus        19 ~pPgp~~~~P~iG~~~~~~~------------------~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~   80 (475)
T 3b98_A           19 EPPLDKGMIPWLGHALEFGK------------------DAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDV   80 (475)
T ss_dssp             CCCEECCSSTTTBTHHHHHH------------------CHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCT
T ss_pred             CCCCCCCCcchHHhHHHHhh------------------CHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCc
Confidence            6899998 899999998854                  567899999999999999999999999999999999999876


Q ss_pred             CcccCCCCC--ccccccccceeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHH
Q 046539          119 DIFQKPKGN--SLGKLVVNGMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWP  196 (484)
Q Consensus       119 ~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~  196 (484)
                      ..++.....  .+..++|.+++..+++.|   |+++.+.|+.+.++.+.+.+.+++.++++.+.... .......+++..
T Consensus        81 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---R~~~~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~  156 (475)
T 3b98_A           81 ASLDQTSYAQVLMKRIFNMILPSHNPESE---KKRAEMHFQGASLTQLSNSMQNNLRLLMTPSEMGL-KTSEWKKDGLFN  156 (475)
T ss_dssp             TTEESHHHHHHHHHHTTCCCCTTCCHHHH---HHHHHHHTSHHHHHHHHHHHHHHHHHHSSTTTTTC-SSCSCEEEEHHH
T ss_pred             ccCCchHHHHHHHHHHhCCCCCCCChHHH---HHHHHHHcChhhHHHHHHHHHHHHHHHHhhccccc-CCCCceeehHHH
Confidence            534432211  134455666666676655   56777799999999999999999888887654211 011223578888


Q ss_pred             HHHHHHHHHHHHHHhCCCccchhHHHHHHHHHHHH---HHhhhcccccch-hH-------HH---HHHh----ccCCchh
Q 046539          197 HIQALAADVISRTAFGSNYDDGRKIFELIREQSHL---FIEVSQFDYIPG-WR-------EE---ALRI----GKASNDD  258 (484)
Q Consensus       197 ~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~p~-~~-------~~---~~~~----~~~~~~~  258 (484)
                      .+..+++++++...||.+....+........+...   +... ...++|. ..       ..   ....    .....+|
T Consensus       157 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~p~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  235 (475)
T 3b98_A          157 LCYSLLFKTGYLTVFGAENNNSAALTQIYEEFRRFDKLLPKL-ARTTVNKEEKQIASAAREKLWKWLTPSGLDRKPREQS  235 (475)
T ss_dssp             HHHHHHHHHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHH-HTTCCCHHHHHHHHHHHHHHHHHHSCTTSCCCCCTTS
T ss_pred             HHHHHHHHHhhhheeCCccccchhcHHHHHHHHHHHhhhHHH-HHHhcChhhhHHHHHHHHHHHHHHHHHHhhccccccH
Confidence            88888899888888996533322222222222211   1111 0112221 11       00   0100    1123568


Q ss_pred             HHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhc
Q 046539          259 LLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELN  338 (484)
Q Consensus       259 ~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~  338 (484)
                      +++.+++...+     ++.++++++. +++.+++||+|||+++++|++++|++||++|+++++|++  .+.+.+++++++
T Consensus       236 ~l~~ll~~~~~-----~~~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~--~~~~~~~~~~~~  307 (475)
T 3b98_A          236 WLGSYVKQLQD-----EGIDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQ--GGKHLRLEERQK  307 (475)
T ss_dssp             HHHHHHHHHHH-----TTCCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC--------------
T ss_pred             HHHHHHHHHHH-----cCCCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHh--cCCCCCCHHHHh
Confidence            99988865432     2347788888 999999999999999999999999999999999999998  344567999999


Q ss_pred             cChhHHHHHHHhhcCCCCccccccccccccee-----cCEEeCCCCeEEechhh-hhcCCCCccCCCCCCCCCCCCCcch
Q 046539          339 RLKMVGKIIYEVFRIYSPAYLIFRTNVEETKL-----GDFILPPGVLLSLPIIL-VHHDHEYWGDDAKAFNPDRFSEGVS  412 (484)
Q Consensus       339 ~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i-----~g~~Ip~G~~v~~~~~~-~~~d~~~~g~~p~~F~P~R~l~~~~  412 (484)
                      +|||++|||+|+||++|+ +.++|.+.+|+++     +||.||||+.|.++.++ +||||++| +||++|+||||++.++
T Consensus       308 ~lpyl~a~i~E~lRl~p~-~~~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~-~dP~~F~PeRfl~~~~  385 (475)
T 3b98_A          308 NTPVFDSVLWETLRLTAA-ALITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIH-QQPEMFQFDRFLNADR  385 (475)
T ss_dssp             CCHHHHHHHHHHHHHHEE-ECEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTS-SSTTSCCTTTTBCTTS
T ss_pred             cCHHHHHHHHHHHhcCCc-cceeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhc-CCcccCCcchhcCCCC
Confidence            999999999999999986 7788999999999     88999999999999999 99999999 9999999999996532


Q ss_pred             hhh-------cCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCC-C----Cc-ceeccCCCcce
Q 046539          413 KAA-------KNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAP-S----SG-ITVYPQHGAHM  479 (484)
Q Consensus       413 ~~~-------~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~-~----~~-~~~~~~~~~~v  479 (484)
                      ...       ......++|||+|+|.|+|++||++|++++++.|+++|+|+++++....+ .    .+ .+..|..+++|
T Consensus       386 ~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  465 (475)
T 3b98_A          386 TEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQPAGDLEI  465 (475)
T ss_dssp             CBCCCCBSSSCBCSCSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTCCCCCBCGGGTBEEECCBSSCCEE
T ss_pred             CccccccccccccccCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCCCCCCCCcccccccccCCCCCceE
Confidence            210       01226799999999999999999999999999999999999987632111 1    23 35678889999


Q ss_pred             eeecC
Q 046539          480 ILNKL  484 (484)
Q Consensus       480 ~~~~~  484 (484)
                      ++++|
T Consensus       466 ~~~~R  470 (475)
T 3b98_A          466 RYRIR  470 (475)
T ss_dssp             EEEEC
T ss_pred             EEEec
Confidence            99987


No 28 
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00  E-value=4.9e-65  Score=489.79  Aligned_cols=379  Identities=23%  Similarity=0.318  Sum_probs=305.1

Q ss_pred             CCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCCccc
Q 046539           43 GNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHDIFQ  122 (484)
Q Consensus        43 gp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~~~~  122 (484)
                      +++..|++||++++..                  +++.++.+++++|||||+ ++++.+.++++||+++++++.++ .|+
T Consensus         3 ~~~~~p~iGnl~~~~~------------------~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~-~f~   62 (389)
T 1n97_A            3 RLSLREAWPYLKDLQQ------------------DPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE-GTT   62 (389)
T ss_dssp             ECCHHHHHHHHHHHHH------------------CHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT-TEE
T ss_pred             ccccccccccHHHHhh------------------ChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC-CCC
Confidence            4566799999998853                  567799999999999999 99999999999999999999887 787


Q ss_pred             CCC-CCc-cccccccceeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHH
Q 046539          123 KPK-GNS-LGKLVVNGMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHIQA  200 (484)
Q Consensus       123 ~~~-~~~-~~~~~g~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~~~  200 (484)
                      +++ .+. ...++|.++++.+|+.|+++|+++.+.|++++++.+++.+.+.++++++.|.        +..+|+.+++..
T Consensus        63 ~~~~~~~~~~~~~g~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~--------~~~~dl~~~~~~  134 (389)
T 1n97_A           63 KATFQYRALSRLTGRGLLTDWGESWKEARKALKDPFLPKNVRGYREAMEEEARAFFGEWR--------GEERDLDHEMLA  134 (389)
T ss_dssp             CCSHHHHHHHHHHCSSTTTCCHHHHHHHHHHHCGGGSHHHHHTTHHHHHHHHHHHHHTCC--------SCCEEHHHHHHH
T ss_pred             CChhHHHHHHHHhCCccccCCcHHHHHHHHHhCcccCHHHHHHHHHHHHHHHHHHHHHcc--------CCcCcHHHHHHH
Confidence            765 332 3445677888889999999999999999999999999999999999998875        236999999999


Q ss_pred             HHHHHHHHHHhCCCccchhHHHHHHHHHHHHHHhhh--cccccchhHHHHHHhccCCchhHHHHHHHhhhHh-hHHhhcC
Q 046539          201 LAADVISRTAFGSNYDDGRKIFELIREQSHLFIEVS--QFDYIPGWREEALRIGKASNDDLLGLLMESNYKE-IQEKEAG  277 (484)
Q Consensus       201 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~~~~~~~~~l~~ll~~~~~~-~~~~~~~  277 (484)
                      +++++++.++||.+.++  ++.+....+........  ...++|.........    ....+..++....++ .-   ..
T Consensus       135 ~~~~vi~~~~fG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~----~~~~~~~~~~~~i~~rll---~~  205 (389)
T 1n97_A          135 LSLRLLGRALFGKPLSP--SLAEHALKALDRIMAQTRSPLALLDLAAEARFRK----DRGALYREAEALIVHPPL---SH  205 (389)
T ss_dssp             HHHHHHHHHHHSSCCCH--HHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHH----HHHHHHHHHGGGTTSTTG---GG
T ss_pred             HHHHHHHHHHcCCcchH--HHHHHHHHHHHHHHHHHhhHHHhcCCchhHHHHH----HHHHHHHHHHHHHHHHhc---cc
Confidence            99999999999998872  44444444433222110  012333211111110    011111222111110 00   24


Q ss_pred             CCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCc
Q 046539          278 MSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPA  357 (484)
Q Consensus       278 l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~  357 (484)
                      ++++++.+++..+++||+|||+++++|++++|++||++|+++++|++.+.                 |||+|+||++|++
T Consensus       206 l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~~-----------------a~i~E~lRl~p~~  268 (389)
T 1n97_A          206 LPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL-----------------AAFQEALRLYPPA  268 (389)
T ss_dssp             SCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHH-----------------HHHHHHHHHSCSS
T ss_pred             CCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH-----------------HHHHHHHhcCCCc
Confidence            89999999999999999999999999999999999999999999998873                 9999999999999


Q ss_pred             ccccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHH
Q 046539          358 YLIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNF  437 (484)
Q Consensus       358 ~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~l  437 (484)
                      +.++|.+++|++++||.||||+.|.++.+++|||  +| +||++|+||||+++.   .. ....++|||.|+|.|+|++|
T Consensus       269 ~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd--~~-~dp~~F~PeR~l~~~---~~-~~~~~~~FG~G~r~C~G~~l  341 (389)
T 1n97_A          269 WILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HF-PDGEAFRPERFLEER---GT-PSGRYFPFGLGQRLCLGRDF  341 (389)
T ss_dssp             CCEEEEESSCEEETTEEECTTCEEEECHHHHHHH--SS-TTTTSCCTTHHHHSC---CC-CBTTBCTTCCSTTCCTTHHH
T ss_pred             cccceeeCCCceECCEEeCCCCEEEECHHHHhhh--cC-CCccccCCccCCCCC---CC-CCCCccCCCCCCCCCchHHH
Confidence            9989999999999999999999999999999999  99 999999999998641   11 22679999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcEEEeCCCcccCCCCcceeccCCCcceeeecC
Q 046539          438 ALMEVKLALAMILQNFSFQLSPTYVHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       438 a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      |++|++++++.|+++|++++.++...  ..+.+.+|+++++|+++||
T Consensus       342 A~~e~~~~la~ll~~f~~~~~~~~~~--~~~~~~~p~~~~~v~~~~~  386 (389)
T 1n97_A          342 ALLEGPIVLRAFFRRFRLDPLPFPRV--LAQVTLRPEGGLPARPREE  386 (389)
T ss_dssp             HHHHHHHHHHHHHTTCBCCCCCCCCE--EESSSEEETTCCEECCBC-
T ss_pred             HHHHHHHHHHHHHHhceEEeCCCCcc--cceEEeeeCCCceEEEeec
Confidence            99999999999999999998766443  4567788999999999886


No 29 
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00  E-value=1.1e-62  Score=478.42  Aligned_cols=380  Identities=14%  Similarity=0.170  Sum_probs=302.9

Q ss_pred             CCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhC-CceEEeeCCcCeEEeCCHHHHHHHHhhCCcccCCCC
Q 046539           48 IFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYG-KKSFKWMGPRPSINVQDPKLIREILLKHDIFQKPKG  126 (484)
Q Consensus        48 p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG-~vf~~~~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~  126 (484)
                      |++||...+..                  +|+.++.+++++|| |||++++++.+.|+++||++++.++ +...|++...
T Consensus         9 P~lG~~~~~~~------------------~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~-~~~~~~~~~~   69 (417)
T 1izo_A            9 KSLDNSLTLLK------------------EGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFY-DTDRFQRQNA   69 (417)
T ss_dssp             CCTTHHHHHHH------------------HGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHT-CTTTEECTTC
T ss_pred             CccchHHHHhh------------------CcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHh-cccccccccc
Confidence            89999999865                  57789999999998 8999999888899999999998544 4445655432


Q ss_pred             Cc---cccccc-cceeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHH
Q 046539          127 NS---LGKLVV-NGMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHIQALA  202 (484)
Q Consensus       127 ~~---~~~~~g-~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~~~~~  202 (484)
                      ..   ...++| .++++.+|+.|+++|+++.+.|+++.++.+.+.+.+.++++++.|.       .++++|+.+++..++
T Consensus        70 ~~~~~~~~~~g~~~l~~~dg~~h~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~-------~~~~~dl~~~~~~~~  142 (417)
T 1izo_A           70 LPKRVQKSLFGVNAIQGMDGSAHIHRKMLFLSLMTPPHQKRLAELMTEEWKAAVTRWE-------KADEVVLFEEAKEIL  142 (417)
T ss_dssp             SCHHHHTTTTCTTCGGGCCHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHT-------TSSEEEHHHHHHHHH
T ss_pred             cccchhhhhccccceeecCChHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHh-------cCCCeeHHHHHHHHH
Confidence            21   334566 4678889999999999999999999999999999999999999986       345799999999999


Q ss_pred             HHHHHHHHhCCCccchhHHHHHHHHHHHHHHhhhcccccchhH-------------HHHHHh----c-cCCchhHHHHHH
Q 046539          203 ADVISRTAFGSNYDDGRKIFELIREQSHLFIEVSQFDYIPGWR-------------EEALRI----G-KASNDDLLGLLM  264 (484)
Q Consensus       203 ~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-------------~~~~~~----~-~~~~~~~l~~ll  264 (484)
                      +++++.+ ||.+.++. +.......+...+....  ...|...             .+.++.    . ....+|+++.++
T Consensus       143 ~~vi~~~-~G~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~d~l~~ll  218 (417)
T 1izo_A          143 CRVACYW-AGVPLKET-EVKERADDFIDMVDAFG--AVGPRHWKGRRARPRAEEWIEVMIEDARAGLLKTTSGTALHEMA  218 (417)
T ss_dssp             HHHHHHH-HTCCCCTT-THHHHHHHHHHHHHHTT--CCSHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCTTSHHHHHH
T ss_pred             HHHHHHH-cCCCCCch-HHHHHHHHHHHHHhhcc--cCCccchhHHHHHHHHHHHHHHHHHHHHhhccCCCcCCHHHHHH
Confidence            9999997 69876543 22223332222222111  1122211             111111    1 113568999988


Q ss_pred             HhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHH
Q 046539          265 ESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVG  344 (484)
Q Consensus       265 ~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~  344 (484)
                      +....+    +..++++++..++..++ ||++||+++++|++++|++||++|+++++|                ++||++
T Consensus       219 ~~~~~~----g~~l~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E----------------~~~~l~  277 (417)
T 1izo_A          219 FHTQED----GSQLDSRMAAIELINVL-RPIVAISYFLVFSALALHEHPKYKEWLRSG----------------NSRERE  277 (417)
T ss_dssp             HCBCTT----SCBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTHHHHHHHTC----------------CHHHHH
T ss_pred             Hhcccc----CCCCCHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHhhCHHHHHHHHhc----------------CCHHHH
Confidence            764321    33578887777766554 999999999999999999999999999986                379999


Q ss_pred             HHHHHhhcCCCCcccccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccc
Q 046539          345 KIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFP  424 (484)
Q Consensus       345 a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~  424 (484)
                      +||+|+||++|+++.++|.+++|++++||.||||+.|.++.+++||||++| +||++|+||||++...     ....|+|
T Consensus       278 a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~rdp~~~-~dp~~F~P~R~~~~~~-----~~~~~~~  351 (417)
T 1izo_A          278 MFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLW-DHPDEFRPERFAEREE-----NLFDMIP  351 (417)
T ss_dssp             HHHHHHHHHSCCCCEEEEEECSCEEETTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCGGGGTTCCC-----CSSSCCT
T ss_pred             HHHHHHhhcCCcccccceeecCCeeECCEEECCCCEEEecHHHhhcCcccc-CCccccChhhcCCCCC-----CCcceeC
Confidence            999999999999999899999999999999999999999999999999999 9999999999997521     2268999


Q ss_pred             cCCC----CCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCCCCcceeccCCCcceeeecC
Q 046539          425 FGGG----PRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       425 Fg~G----~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      ||.|    +|.|+|++||++|++++++.|+++|+++++++.........+.+|+++++|++++|
T Consensus       352 FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r  415 (417)
T 1izo_A          352 QGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQSLHYSLARMPSLPESGFVMSGIRR  415 (417)
T ss_dssp             TCSSCTTSSSCCTTHHHHHHHHHHHHHHHHHTEEEECCSCCCCCCSSSSSCCCTTCCEEEEEEE
T ss_pred             CCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCeEEeCCCCcCcccccCCCCCCCCceEeeeeC
Confidence            9999    59999999999999999999999999998765332223456778999999999987


No 30 
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00  E-value=2.2e-62  Score=475.93  Aligned_cols=383  Identities=13%  Similarity=0.140  Sum_probs=303.0

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHh-CCceEEeeCCcCeEEeCCHHHHHHHHhhC
Q 046539           40 GFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKY-GKKSFKWMGPRPSINVQDPKLIREILLKH  118 (484)
Q Consensus        40 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y-G~vf~~~~~~~~~vvv~dp~~i~~vl~~~  118 (484)
                      ++|||   |++||...+..                  +|+.++.+++++| ||||++++++.+.+++++|++++ ++.++
T Consensus         3 ~pPg~---P~iG~~~~~~~------------------~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~   60 (415)
T 3awm_A            3 KTPHT---KGPDETLSLLA------------------DPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT   60 (415)
T ss_dssp             ---------CCCCHHHHHH------------------STTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT
T ss_pred             CCCCC---CccchHHHHHh------------------ChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc
Confidence            36776   89999998864                  6788999999999 79999999888899999999986 77665


Q ss_pred             CcccCCCCCc---cccccc-cceeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccch
Q 046539          119 DIFQKPKGNS---LGKLVV-NGMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDI  194 (484)
Q Consensus       119 ~~~~~~~~~~---~~~~~g-~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl  194 (484)
                      +.|++.....   ...++| .+++..||+.|+++|+++.+.|+++.++.+.+.+.+.++++++.|.+       ++++|+
T Consensus        61 ~~f~~~~~~~~~~~~~~~g~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~~~~-------~~~vdl  133 (415)
T 3awm_A           61 TRFEREGAMPVAIQKTLLGQGGVQGLDGETHRHRKQMFMGLMTPERVRALAQLFEAEWRRAVPGWTR-------KGEIVF  133 (415)
T ss_dssp             TTEECTTCSCHHHHTTTSCSSSGGGCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHH-------HSEEEH
T ss_pred             cccccccccchhhhhhccCCcceeecCcHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcc-------CCcEeH
Confidence            5666643322   234556 46788999999999999999999999999999999999999999974       236999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCccchhHHHHHHHHHHHHHHhhhcccccchhH-----------------HHHHHhc-cCCc
Q 046539          195 WPHIQALAADVISRTAFGSNYDDGRKIFELIREQSHLFIEVSQFDYIPGWR-----------------EEALRIG-KASN  256 (484)
Q Consensus       195 ~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-----------------~~~~~~~-~~~~  256 (484)
                      .+++..+++++++.+ ||.+.++. +.......+...+....  ...|.+.                 .+..+.. ....
T Consensus       134 ~~~~~~~~~~vi~~~-~G~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~  209 (415)
T 3awm_A          134 YDELHEPLTRAVCAW-AGVPLPDD-EAGNRAGELRALFDAAG--SASPRHLWSRLARRRVDAWAKRIIEGIRAGSIGSGS  209 (415)
T ss_dssp             HHHHHHHHHHHHHHH-HTCCCCGG-GHHHHHHHHHHHHHSTT--CSSHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCCT
T ss_pred             HHHHHHHHHHHHHHH-cCCCCCcc-hHHHHHHHHHHHHHHhc--ccCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Confidence            999999999999998 89887653 23333332222221111  1112111                 1111111 1235


Q ss_pred             hhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhh
Q 046539          257 DDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDE  336 (484)
Q Consensus       257 ~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~  336 (484)
                      +|+++.++....++    +..++++++..++..++ ||++||+++++|++++|++||++|+++++|              
T Consensus       210 ~d~l~~ll~~~~~~----g~~~~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e--------------  270 (415)
T 3awm_A          210 GTAAYAIAWHRDRH----DDLLSPHVAAVELVNVL-RPTVAIAVYITFVAHALQTCSGIRAALVQQ--------------  270 (415)
T ss_dssp             TSHHHHHHHCBCTT----SCBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTTHHHHHHHC--------------
T ss_pred             CCHHHHHHhhhhcc----CCCCCHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhChHHHHHHHHH--------------
Confidence            68999998764321    33578888877776655 999999999999999999999999999987              


Q ss_pred             hccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhc
Q 046539          337 LNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAK  416 (484)
Q Consensus       337 ~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~  416 (484)
                         +||+++||+|+||++|+++.++|.+++|++++||.||||+.|.++.+++||||++| +||++|+|+||++.+.    
T Consensus       271 ---~~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~-~dp~~F~P~R~~~~~~----  342 (415)
T 3awm_A          271 ---PDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW-ADPQEFRPERFRAWDE----  342 (415)
T ss_dssp             ---TTHHHHHHHHHHHHSCCSCEEEEEESSCEEETTEEECTTCEEEEEHHHHHTCHHHH-SSTTSCCGGGGGGCCC----
T ss_pred             ---HHHHHHHHHHHhhcCCCccccceeecCCeEECCEEECCCCEEEeCchhhcCCcccc-CCccccChhhcCCCCC----
Confidence               69999999999999999999899999999999999999999999999999999999 9999999999997521    


Q ss_pred             CCCCcccccCCC----CCCccchHHHHHHHHHHHHHHHHhcEEEeCCCcccCCCCcceeccCCCcceeeec
Q 046539          417 NNEVSFFPFGGG----PRICIGQNFALMEVKLALAMILQNFSFQLSPTYVHAPSSGITVYPQHGAHMILNK  483 (484)
Q Consensus       417 ~~~~~~~~Fg~G----~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  483 (484)
                       ....|+|||.|    +|.|+|++||++|++++++.|+++|+++++++.........+..|+++++|++++
T Consensus       343 -~~~~~~~FG~G~r~~~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  412 (415)
T 3awm_A          343 -DSFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFARLPALPKSGFVMRNVH  412 (415)
T ss_dssp             -CSSSCCTTCCSCTTTSCCCTTHHHHHHHHHHHHHHHHHTCEEECCSCCCCBCTTSSSCCBTTCCEEEEEE
T ss_pred             -CCCCccCCCCCCCCCCCcCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCcCcCCCccccCCCceEEEEe
Confidence             22689999999    5999999999999999999999999999876533223445777899999999986


No 31 
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00  E-value=2.3e-62  Score=474.47  Aligned_cols=383  Identities=17%  Similarity=0.219  Sum_probs=294.4

Q ss_pred             HHHHHHHHHHhcchHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEE
Q 046539           16 YCAWKILNWAWLKPKKLENFLRQQGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFK   95 (484)
Q Consensus        16 ~~~~~~~~~~~~~p~~~~~~~~~~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~   95 (484)
                      ++++.++|+.+++|+.        ++|||+..          .                  +|+.++.++++ ||||   
T Consensus         4 ~~~~~~iyr~~~~pl~--------~~PGp~~~----------~------------------~p~~~~~~l~~-~gpv---   43 (411)
T 2jjn_A            4 DVETTCCARRTLTTID--------EVPGMADE----------T------------------ALLDWLGTMRE-KQPV---   43 (411)
T ss_dssp             -------------CCC--------SCCCSSCH----------H------------------HHHHHHHHHHH-HCSE---
T ss_pred             hhHhHHhhhcccCCCC--------CCCCcccc----------c------------------ChHHHHHHHHH-hCCc---
Confidence            4556788889999987        88888731          1                  45668888876 9997   


Q ss_pred             eeCCcCeEEeCCHHHHHHHHhhCCcccCCCCCcccc--ccccceeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHH
Q 046539           96 WMGPRPSINVQDPKLIREILLKHDIFQKPKGNSLGK--LVVNGMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCN  173 (484)
Q Consensus        96 ~~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~  173 (484)
                      ++++.+.++++|++++++++.+++.|++++...+..  ..+.++++.+|+.|+++|+++.+.|++++++.+.+.+.+.++
T Consensus        44 ~~~~~~~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~i~~~~~  123 (411)
T 2jjn_A           44 WQDRYGVWHVFRHADVQTVLRDTATFSSDPTRVIEGASPTPGMIHEIDPPEHRALRKVVSSAFTPRTISDLEPRIRDVTR  123 (411)
T ss_dssp             EECTTSCEEECSHHHHHHHHHCTTTEESCGGGGSTTCCCCTTCGGGCCTTHHHHHHHHHHHHSCHHHHHTTHHHHHHHHH
T ss_pred             ccCCCCeEEECCHHHHHHHHcCcccccCcccccCCcccccccccccCCchHHHHHHHHhhhhcCHHHHHHHHHHHHHHHH
Confidence            677778999999999999998765677765332222  335668888999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCcccchHHHH-HHHHHHHHHHHHhCCCccchhHHHHHHHHHHHHHHhhhccccc-chhH------
Q 046539          174 HMIRKLFEIAASDEESFELDIWPHI-QALAADVISRTAFGSNYDDGRKIFELIREQSHLFIEVSQFDYI-PGWR------  245 (484)
Q Consensus       174 ~l~~~l~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~------  245 (484)
                      ++++. .       + +.+|+...+ ..+++++++.+ ||.+.++.+++......+....    ...+. |...      
T Consensus       124 ~ll~~-~-------~-~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~~~~~~~~~~~~~~~----~~~~~~p~~~~~~~~~  189 (411)
T 2jjn_A          124 SLLAD-A-------G-ESFDLVDVLAFPLPVTIVAEL-LGLPPMDHEQFGDWSGALVDIQ----MDDPTDPALAERIADV  189 (411)
T ss_dssp             HHHHT-S-------C-SEEEHHHHTTTHHHHHHHHHH-HTCCSCCCSTTCCHHHHHHHSC----CSCTTCHHHHHHHHHH
T ss_pred             HHHhc-C-------C-CceeHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhcc----CccccchHHHHHHHHH
Confidence            99887 1       2 268998555 68999999998 9998765444433333332211    01111 1111      


Q ss_pred             --------HHHHHh-ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHH
Q 046539          246 --------EEALRI-GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQ  316 (484)
Q Consensus       246 --------~~~~~~-~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~  316 (484)
                              .+.+++ .....+|+++.+++...+     +..++++++.+++..+++||+|||+++++|++++|++||++|
T Consensus       190 ~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~-----~~~l~~~el~~~~~~~~~AG~eTt~~~l~~~l~~L~~~P~~~  264 (411)
T 2jjn_A          190 LNPLTAYLKARCAERRADPGDDLISRLVLAEVD-----GRALDDEEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHW  264 (411)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBT-----TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCHHHHHHhcccC-----CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHH
Confidence                    111111 112356899999876432     346899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCCeEEechhhhhcCCCCcc
Q 046539          317 ERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWG  396 (484)
Q Consensus       317 ~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g  396 (484)
                      +++++|+                 .|++|||+|+||++|+++.++|.+++|++++||.||||+.|.++.+++||||++| 
T Consensus       265 ~~l~~E~-----------------~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-  326 (411)
T 2jjn_A          265 DAAAEDP-----------------GRIPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAH-  326 (411)
T ss_dssp             HHHHHCG-----------------GGHHHHHHHHHHHSCSSCEEEEEESSCEEETTEEECSSCEEEEEHHHHHTCTTTS-
T ss_pred             HHHHhCH-----------------HhHHHHHHHHhhhCCCcCCcceEECCCeEECCEEECCCCEEEechhhhCCChhhc-
Confidence            9999984                 3899999999999999999999999999999999999999999999999999999 


Q ss_pred             CCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcE-EEeCCCcccCCCCcceeccCC
Q 046539          397 DDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFS-FQLSPTYVHAPSSGITVYPQH  475 (484)
Q Consensus       397 ~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~  475 (484)
                      +||++|+||||.++         ..++|||.|+|.|+|++||++|++++++.|+++|+ ++++++.......+...++..
T Consensus       327 ~dP~~F~PeR~~~~---------~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~  397 (411)
T 2jjn_A          327 DDPDRFDPSRKSGG---------AAQLSFGHGVHFCLGAPLARLENRVALEEIIARFGRLTVDRDDERLRHFEQIVLGTR  397 (411)
T ss_dssp             SSTTSCCTTCCCSS---------CCCGGGCSSTTCCTTHHHHHHHHHHHHHHHHHHHSCCEECCSSCCCCBCCSSSSSBS
T ss_pred             CCccccCCCCCCCC---------CCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcceECCCCceeccccccccCcc
Confidence            99999999998531         36899999999999999999999999999999995 998743222113455667788


Q ss_pred             CcceeeecC
Q 046539          476 GAHMILNKL  484 (484)
Q Consensus       476 ~~~v~~~~~  484 (484)
                      +++|+++|+
T Consensus       398 ~lpv~~~~~  406 (411)
T 2jjn_A          398 HLPVLAGSS  406 (411)
T ss_dssp             CCEEECSCC
T ss_pred             eeEEEecCC
Confidence            899999875


No 32 
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00  E-value=5.1e-61  Score=464.66  Aligned_cols=374  Identities=14%  Similarity=0.153  Sum_probs=289.8

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeC-CcCeEEeCCHHHHHHHHhhCC
Q 046539           41 FSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMG-PRPSINVQDPKLIREILLKHD  119 (484)
Q Consensus        41 ~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~-~~~~vvv~dp~~i~~vl~~~~  119 (484)
                      +|||+++|++|++..                     +|+..+.+++ +|||||++.++ +.+.+++++++.+++++.++.
T Consensus         3 pPGp~~~P~~g~~~~---------------------~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~   60 (404)
T 1jfb_A            3 ASGAPSFPFSRASGP---------------------EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEK   60 (404)
T ss_dssp             ---CCBSSCCCSSTT---------------------SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTT
T ss_pred             CCCCCCCCCCCCcCC---------------------CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCc
Confidence            799999999998652                     5677899885 69999999875 566788999999999998764


Q ss_pred             --cccCCCCCc-cc-----ccc-ccceeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 046539          120 --IFQKPKGNS-LG-----KLV-VNGMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESF  190 (484)
Q Consensus       120 --~~~~~~~~~-~~-----~~~-g~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~  190 (484)
                        .+..++... ..     ... +.++++.+|+.|+++|+++++.|++++++++++.+.++++++++.|.+..+   ++.
T Consensus        61 ~~~~~~r~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~---~~~  137 (404)
T 1jfb_A           61 LSKVRTRQGFPELSASGKQAAKAKPTFVDMDPPEHMHQRSMVEPTFTPEAVKNLQPYIQRTVDDLLEQMKQKGC---ANG  137 (404)
T ss_dssp             EECCTTSTTCCCCSHHHHHHTTSCCCGGGCCTTHHHHHHTTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCS---TTS
T ss_pred             ccccccccCCccccccccchhcccCcccccCchhHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCC
Confidence              222222111 11     122 245778899999999999999999999999999999999999999986421   235


Q ss_pred             ccchHHHHHHHHHHHHHHHHhCCCccchhHHHHHHHHHHHHHHhhhcccccchhH-------------HHHHHh-ccCCc
Q 046539          191 ELDIWPHIQALAADVISRTAFGSNYDDGRKIFELIREQSHLFIEVSQFDYIPGWR-------------EEALRI-GKASN  256 (484)
Q Consensus       191 ~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-------------~~~~~~-~~~~~  256 (484)
                      .+|+...+...+.++++..+||.+.++.+ .......   .+..     ..+...             .+.++. .....
T Consensus       138 ~~d~~~~~~~~~~~~i~~~~~G~~~~~~~-~~~~~~~---~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~  208 (404)
T 1jfb_A          138 PVDLVKEFALPVPSYIIYTLLGVPFNDLE-YLTQQNA---IRTN-----GSSTAREASAANQELLDYLAILVEQRLVEPK  208 (404)
T ss_dssp             CEEHHHHTTTHHHHHHHHHHHTCCGGGHH-HHHHHHH---HHHC-----TTSCHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred             CccHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHH---HHhc-----cCcchHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            79999999999999999999998775432 2221111   1110     001110             111111 11235


Q ss_pred             hhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhh
Q 046539          257 DDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDE  336 (484)
Q Consensus       257 ~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~  336 (484)
                      +|+++.+++...+     ++.++++++.+++..+++||+|||+++++|++++|++||++|++++++              
T Consensus       209 ~d~l~~ll~~~~~-----~~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~--------------  269 (404)
T 1jfb_A          209 DDIISKLCTEQVK-----PGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN--------------  269 (404)
T ss_dssp             SSHHHHHHHHTTT-----TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC--------------
T ss_pred             CcHHHHHHHhhcc-----CCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC--------------
Confidence            7899999865422     236899999999999999999999999999999999999999999973              


Q ss_pred             hccChhHHHHHHHhhcCCCCcc-cccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhh
Q 046539          337 LNRLKMVGKIIYEVFRIYSPAY-LIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAA  415 (484)
Q Consensus       337 ~~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~  415 (484)
                         .+|++|||+|+||++|+++ .++|.+++|++++||.||||+.|.++.+++||||++| +||++|+||||+++     
T Consensus       270 ---~~yl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeRf~~~-----  340 (404)
T 1jfb_A          270 ---PSLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVF-ENPDEFNMNRKWPP-----  340 (404)
T ss_dssp             ---GGGHHHHHHHHHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCCCCS-----
T ss_pred             ---hHhHHHHHHHHHhhCCCccccceeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhC-CChhhcCCCCCCCC-----
Confidence               4899999999999999999 5899999999999999999999999999999999999 99999999998753     


Q ss_pred             cCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhc-EEEeCCCcc-cCCCCcceeccCCCccee
Q 046539          416 KNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNF-SFQLSPTYV-HAPSSGITVYPQHGAHMI  480 (484)
Q Consensus       416 ~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~~~~~-~~~~~~~~~~~~~~~~v~  480 (484)
                          ..++|||.|+|.|+|++||++|++++++.|+++| +++++++.. .....+...+....++|+
T Consensus       341 ----~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~g~~~lpv~  403 (404)
T 1jfb_A          341 ----QDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAVPLGKINYTPLNRDVGIVDLPVI  403 (404)
T ss_dssp             ----SCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCEECCTTSCSCEEECEEE
T ss_pred             ----CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHHCCCceecCCcccccccccccccCcccceee
Confidence                3599999999999999999999999999999999 799875322 111223333444445554


No 33 
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00  E-value=1.4e-61  Score=467.96  Aligned_cols=371  Identities=17%  Similarity=0.229  Sum_probs=294.0

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEe----e-CC-cCeEEeCCHHHHHH
Q 046539           40 GFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKW----M-GP-RPSINVQDPKLIRE  113 (484)
Q Consensus        40 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~----~-~~-~~~vvv~dp~~i~~  113 (484)
                      .+|||+++|+.     +.                  ++++.++.++ ++|||||+++    + ++ .++|+++||+++++
T Consensus        11 lppgp~~~p~~-----~~------------------~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~   66 (406)
T 1ued_A           11 LLREPANFQLR-----TN------------------CDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRR   66 (406)
T ss_dssp             EEECCTTTTCE-----ET------------------TEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHH
T ss_pred             CcccCcccCCC-----CC------------------CCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHH
Confidence            46889888876     11                  2677899999 9999999999    6 78 89999999999999


Q ss_pred             HH-hhCCcccCCCCCc-----cc-c-ccccceeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhc
Q 046539          114 IL-LKHDIFQKPKGNS-----LG-K-LVVNGMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAAS  185 (484)
Q Consensus       114 vl-~~~~~~~~~~~~~-----~~-~-~~g~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~  185 (484)
                      ++ .++ .+++++...     +. . ..+.++++.+|+.|+++|+++.+.|++++++++++.+.++++++++.|.+    
T Consensus        67 vl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----  141 (406)
T 1ued_A           67 ILGDHE-HFTTRPQFTQSKSGAHVEAQFVGQISTYDPPEHTRLRKMLTPEFTVRRIRRMEPAIQSLIDDRLDLLEA----  141 (406)
T ss_dssp             HHHCCS-SEECCCCC---------CGGGTTCGGGCCTTHHHHHHHHHGGGSSHHHHHHHHHHHHHHHHHHHHHHHH----
T ss_pred             HHhhCc-cccccccccccccccccccccccccccCCCHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHh----
Confidence            99 554 355543211     11 1 13456888899999999999999999999999999999999999999974    


Q ss_pred             CCCCcccchHHHHHH-HHHHHHHHHHhCCCccchhHHHHHHHHHHHHHHhhhcccc------cchhHHHHHHh-ccCCch
Q 046539          186 DEESFELDIWPHIQA-LAADVISRTAFGSNYDDGRKIFELIREQSHLFIEVSQFDY------IPGWREEALRI-GKASND  257 (484)
Q Consensus       186 ~~~~~~vdl~~~~~~-~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~p~~~~~~~~~-~~~~~~  257 (484)
                        .+..+|+.+++.. +++++++. +||.+.++.+++......+....  ......      +-.+..+.+++ .....+
T Consensus       142 --~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~  216 (406)
T 1ued_A          142 --EGPSADLQGLFADPVGAHALCE-LLGIPRDDQREFVRRIRRNADLS--RGLKARAADSAAFNRYLDNLLARQRADPDD  216 (406)
T ss_dssp             --HCTTEEHHHHTHHHHHHHHHHH-HHTCCHHHHHHHHHHHHHCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHSCCS
T ss_pred             --cCCCeeHHHHHHHHhHHHHHHH-HcCCCHHHHHHHHHHHHHHHhcc--CCHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence              2347999998875 99999995 79987654334433333222100  000000      00000111111 112357


Q ss_pred             hHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhh
Q 046539          258 DLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDEL  337 (484)
Q Consensus       258 ~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~  337 (484)
                      |+++.+++..       +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+              
T Consensus       217 d~l~~ll~~~-------~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~--------------  275 (406)
T 1ued_A          217 GLLGMIVRDH-------GDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESP--------------  275 (406)
T ss_dssp             SHHHHHHHHH-------GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCH--------------
T ss_pred             CHHHHHHHhc-------CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHhCH--------------
Confidence            8999998764       1348999999999999999999999999999999999999999999985              


Q ss_pred             ccChhHHHHHHHhhcCCCCccc-ccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhc
Q 046539          338 NRLKMVGKIIYEVFRIYSPAYL-IFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAK  416 (484)
Q Consensus       338 ~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~  416 (484)
                         .|++|||+|+||++|+++. ++|.+++|++++||.||||+.|.++.+++||||++| +||++|+||||-        
T Consensus       276 ---~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~--------  343 (406)
T 1ued_A          276 ---EKAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALT-PDPDVLDANRAA--------  343 (406)
T ss_dssp             ---HHHHHHHHHHHHHHCSSCSCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSCC--------
T ss_pred             ---HHHHHHHHHHHhcCCCcccCcceecCCCEEECCEEECCCCEEEecHHHhcCCchhC-CChhhcCCCCCC--------
Confidence               3689999999999999996 899999999999999999999999999999999999 999999999981        


Q ss_pred             CCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhc-EEEeCCC-cccCCCCcceeccCCCcceee
Q 046539          417 NNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNF-SFQLSPT-YVHAPSSGITVYPQHGAHMIL  481 (484)
Q Consensus       417 ~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~  481 (484)
                         ..++|||.|+|.|+|++||++|++++++.|+++| ++++.++ .......+.+.++ .+++|++
T Consensus       344 ---~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~-~~lpv~~  406 (406)
T 1ued_A          344 ---VSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVPIEEVKYRSAFVDCP-DQVPVTW  406 (406)
T ss_dssp             ---CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSSSCCB-SCCEEEC
T ss_pred             ---CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCceecCCcccccccccccccC-CeeeeeC
Confidence               4689999999999999999999999999999999 7998743 2333455677788 9999875


No 34 
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00  E-value=4.2e-61  Score=465.24  Aligned_cols=360  Identities=17%  Similarity=0.239  Sum_probs=292.8

Q ss_pred             ccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCCcccCCCCCc-------cccccccceeecCCcchhHH
Q 046539           76 PRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHDIFQKPKGNS-------LGKLVVNGMVTYEGEQWSKV  148 (484)
Q Consensus        76 ~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~  148 (484)
                      .+|+.++.++ ++|||||++++++.+.|+++||+++++++.++..|+.++...       .....+.++++.+|+.|+++
T Consensus        13 ~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~   91 (404)
T 3ejb_B           13 KNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDARFKVRTPLPESSTKYQDLSHVQNQMMLFQNQPDHRRL   91 (404)
T ss_dssp             HCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCTTEECCCSSCTTCCTTHHHHHHHHTSGGGCCTTHHHHH
T ss_pred             cCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCcccccCcccccccccccchhhhhhcchhhcCCchHHHH
Confidence            4788899988 589999999999999999999999999998877666655311       23345778888999999999


Q ss_pred             HhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHHH-HHHHHHHHHHHhCCCccchhHHHHHHHH
Q 046539          149 RKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHIQ-ALAADVISRTAFGSNYDDGRKIFELIRE  227 (484)
Q Consensus       149 R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~~~  227 (484)
                      |+++++.|++++++.+++.+.+.++++++.|.       ++..+|+...+. .++.++++. +||.+.++.+.+......
T Consensus        92 Rr~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~-------~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~~~~~  163 (404)
T 3ejb_B           92 RTLASGAFTPRTTESYQPYIIETVHHLLDQVQ-------GKKKMEVISDFAFPLASFVIAN-IIGVPEEDREQLKEWAAS  163 (404)
T ss_dssp             HHHHHGGGSHHHHHTTHHHHHHHHHHHHHTTT-------TTSEEEHHHHTHHHHHHHHHHH-HHTCCGGGHHHHHHHHHH
T ss_pred             HHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhh-------hcCCcchHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999886       334688866654 688999998 589887655555544444


Q ss_pred             HHHHHHhhhcccccc-hhH-------------HHHHH-hccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHh
Q 046539          228 QSHLFIEVSQFDYIP-GWR-------------EEALR-IGKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYL  292 (484)
Q Consensus       228 ~~~~~~~~~~~~~~p-~~~-------------~~~~~-~~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~  292 (484)
                      +...+..    ...+ .+.             .+.++ ......+|+++.++ ...+     +..++++++.+++..+++
T Consensus       164 ~~~~~~~----p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll-~~~~-----~~~ls~~el~~~~~~l~~  233 (404)
T 3ejb_B          164 LIQTIDF----TRSRKALTEGNIMAVQAMAYFKELIQKRKRHPQQDMISMLL-KGRE-----KDKLTEEEAASTCILLAI  233 (404)
T ss_dssp             HHGGGST----TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHH-HC---------CCCHHHHHHHHHHHHH
T ss_pred             HHHhccC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcchHHHHHH-hccc-----CCCCCHHHHHHHHHHHHH
Confidence            3332211    0000 000             11111 12234678999998 3222     346999999999999999


Q ss_pred             cccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecC
Q 046539          293 AGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGD  372 (484)
Q Consensus       293 aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g  372 (484)
                      ||+|||+++++|++++|++||++|+++++|+                 .|+++||+|+||++|+++.++|.+++|++++|
T Consensus       234 AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~g  296 (404)
T 3ejb_B          234 AGHETTVNLISNSVLCLLQHPEQLLKLRENP-----------------DLIGTAVEECLRYESPTQMTARVASEDIDICG  296 (404)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG-----------------GGHHHHHHHHHHHSCSBCEEEEEESSCEEETT
T ss_pred             cchHHHHHHHHHHHHHHHHCHHHHHHHHhCH-----------------HHHHHHHHHHHHhCCcccccceEeCCCeEECC
Confidence            9999999999999999999999999999983                 58999999999999999999999999999999


Q ss_pred             EEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHh
Q 046539          373 FILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQN  452 (484)
Q Consensus       373 ~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~  452 (484)
                      |.||||+.|.++.+++||||++| +||++|+||||-           ..++|||.|+|.|+|++||++|++++++.|+++
T Consensus       297 ~~ip~Gt~v~~~~~~~~rdp~~~-~dp~~F~p~R~~-----------~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ll~~  364 (404)
T 3ejb_B          297 VTIRQGEQVYLLLGAANRDPSIF-TNPDVFDITRSP-----------NPHLSFGHGHHVCLGSSLARLEAQIAINTLLQR  364 (404)
T ss_dssp             EEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTCSS-----------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHH
T ss_pred             EEECCCCEEEecHHHhCCChhhC-CCcceeCCCCCC-----------CCCCCCCCcCccCcCHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999 999999999982           468999999999999999999999999999999


Q ss_pred             c-EEEeCCCcccCCCCcceeccCCCcceeeecC
Q 046539          453 F-SFQLSPTYVHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       453 f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      | +++++++. .....+...+....++|+++||
T Consensus       365 f~~~~l~~~~-~~~~~~~~~~~~~~lpv~~~~~  396 (404)
T 3ejb_B          365 MPSLNLADFE-WRYRPLFGFRALEELPVTFEAS  396 (404)
T ss_dssp             CTTCEEC--C-CCBCSCSSBCCBSCCEEECC--
T ss_pred             CcccccCCCC-ceeccCcccCCcceeEEEEecc
Confidence            9 99998542 3345566778888999999986


No 35 
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00  E-value=1.3e-60  Score=461.32  Aligned_cols=364  Identities=16%  Similarity=0.211  Sum_probs=293.8

Q ss_pred             cccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCCcccCCCCCc--------cccccccceeecCCcchh
Q 046539           75 VPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHDIFQKPKGNS--------LGKLVVNGMVTYEGEQWS  146 (484)
Q Consensus        75 ~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~  146 (484)
                      ..+|+.++.++ ++|||||++++++.+.++++||+++++++.++. |++++...        +....+.++++.+|+.|+
T Consensus        19 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~-f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~   96 (411)
T 3a4g_A           19 WQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR-LSKDWRHTLPEDQRADMPATPTPMMILMDPPDHT   96 (411)
T ss_dssp             TTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT-EESCGGGGSCGGGCTTCCSCSSCCGGGCCTTHHH
T ss_pred             hcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC-cccccccccccccccccCcccccccccCCchHHH
Confidence            34788899999 999999999999889999999999999998765 76654321        122246678889999999


Q ss_pred             HHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHH-HHHHHHHHHHHHhCCCccchhHHHHHH
Q 046539          147 KVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHI-QALAADVISRTAFGSNYDDGRKIFELI  225 (484)
Q Consensus       147 ~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~  225 (484)
                      ++|+++.+.|++++++.+.+.+.+.++++++.|.+       ++++|+...+ ..+++++++. +||.+.++.+++....
T Consensus        97 ~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-------~~~vd~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~~~  168 (411)
T 3a4g_A           97 RLRKLVGRSFTVRRMNELEPRITEIADGLLAGLPT-------DGPVDLMREYAFQIPVQVICE-LLGVPAEDRDDFSAWS  168 (411)
T ss_dssp             HHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHSCS-------SSCEEHHHHTTTTHHHHHHHH-HHTCCGGGHHHHHHHH
T ss_pred             HHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHh-------cCCccHHHHHHHHhHHHHHHH-HhCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999862       2479997555 6899999997 5999876544444433


Q ss_pred             HHHHHHHHhhhcccccc------hhHHHHHHh-ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccH
Q 046539          226 REQSHLFIEVSQFDYIP------GWREEALRI-GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETT  298 (484)
Q Consensus       226 ~~~~~~~~~~~~~~~~p------~~~~~~~~~-~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt  298 (484)
                      ..+...   ........      .+..+.++. .....+|+++.+++...+    .+..++++++.+++..+++||+|||
T Consensus       169 ~~~~~~---~p~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~----~~~~ls~~ei~~~~~~l~~AG~dTt  241 (411)
T 3a4g_A          169 SVLVDD---SPADDKNAAMGKLHGYLSDLLERKRTEPDDALLSSLLAVSDE----DGDRLSQEELVAMAMLLLIAGHETT  241 (411)
T ss_dssp             HHHTTS---SCTTTHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCCT----TCCCCCHHHHHHHHHHHHHHHSHHH
T ss_pred             HHHhcc---CCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhcc----CCCCCCHHHHHHHHHHHHHhchhhH
Confidence            332211   00000000      000111111 112356899999876431    1346899999999999999999999


Q ss_pred             HHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcc-cccccccccceecCEEeCC
Q 046539          299 ASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAY-LIFRTNVEETKLGDFILPP  377 (484)
Q Consensus       299 ~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~Ip~  377 (484)
                      +++++|++++|++||++|+++++|+                 .|++|||+|+||++|+++ .++|.+++|++++||.|||
T Consensus       242 ~~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~  304 (411)
T 3a4g_A          242 VNLIGNGVLALLTHPDQRKLLAEDP-----------------SLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPA  304 (411)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHHHCG-----------------GGHHHHHHHHHHHTCSBCBCCCEEESSCEEETTEEECT
T ss_pred             HHHHHHHHHHHHhCHHHHHHHhcCH-----------------HHHHHHHHHHHHhcccccCCceeEeCCCEEECCEEECC
Confidence            9999999999999999999999983                 589999999999999999 6899999999999999999


Q ss_pred             CCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhc-EEE
Q 046539          378 GVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNF-SFQ  456 (484)
Q Consensus       378 G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~  456 (484)
                      |+.|.++.+++||||++| +||++|+||||.           ..++|||.|+|.|+|++||++|++++++.|+++| +++
T Consensus       305 Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~  372 (411)
T 3a4g_A          305 GEMVMLGLAAANRDADWM-PEPDRLDITRDA-----------SGGVFFGHGIHFCLGAQLARLEGRVAIGRLFADRPELA  372 (411)
T ss_dssp             TCEEEEBHHHHTTCTTTS-SSTTSCCTTSCC-----------TTCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred             CCEEEeChhhhCCChhhc-CCccccCCCCCC-----------CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCcE
Confidence            999999999999999999 999999999983           3589999999999999999999999999999999 699


Q ss_pred             eCCCc-ccCCCCcceeccCCCcceeeecC
Q 046539          457 LSPTY-VHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       457 ~~~~~-~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      ++++. ......+.+.++..+++|++++|
T Consensus       373 l~~~~~~~~~~~~~~~~~~~~lpv~~~~r  401 (411)
T 3a4g_A          373 LAVGLDELVYRESTLVRGLSRMPVTMGPR  401 (411)
T ss_dssp             ESSCGGGCCBCCCTTBCCBSCCEEECCCC
T ss_pred             ECCCccccccccCccccCcceeEEEecCc
Confidence            87542 22234456677888999999886


No 36 
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00  E-value=2.6e-60  Score=459.05  Aligned_cols=376  Identities=13%  Similarity=0.152  Sum_probs=300.5

Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEee-CCcC-eEEeCCHHHHHHHHh
Q 046539           39 QGFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWM-GPRP-SINVQDPKLIREILL  116 (484)
Q Consensus        39 ~~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~-~~~~-~vvv~dp~~i~~vl~  116 (484)
                      |..|+|+.+|+.++..                     .+|+.++.+++ +|||||++++ ++.+ .++++||+++++++.
T Consensus         8 ~~~~~~~~~p~~~~~~---------------------~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~   65 (406)
T 1s1f_A            8 QAVPPVRDWPAVDLPG---------------------SDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTN   65 (406)
T ss_dssp             CCSCCEEECCCCCCCT---------------------TCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHT
T ss_pred             hhccCCCCCCCCcccc---------------------cCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHc
Confidence            4678888778877521                     26788999885 7999999996 5666 999999999999998


Q ss_pred             hCCcccCCCCCc-----ccc-c--cccceeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCC
Q 046539          117 KHDIFQKPKGNS-----LGK-L--VVNGMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEE  188 (484)
Q Consensus       117 ~~~~~~~~~~~~-----~~~-~--~g~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~  188 (484)
                      + ..|++++...     ... .  .+.++++.+|+.|+++|+++++.|++++++.+++.+.+.++++++.|.+.      
T Consensus        66 ~-~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~------  138 (406)
T 1s1f_A           66 D-PRFGREAVMDRQVTRLAPHFIPARGAVGFLDPPDHTRLRRSVAAAFTARGVERVRERSRGMLDELVDAMLRA------  138 (406)
T ss_dssp             C-TTEESTTTTTTTBCBSSSSCSSCTTSGGGCCTTHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH------
T ss_pred             C-CCccCCcCCCCCcccccccccccccccccCCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHhc------
Confidence            7 4566654322     112 2  36778889999999999999999999999999999999999999999741      


Q ss_pred             CcccchHHHHH-HHHHHHHHHHHhCCCccchhHHHHHHHHHHHHHHhhhcccc------cchhHHHHHHhcc-CCchhHH
Q 046539          189 SFELDIWPHIQ-ALAADVISRTAFGSNYDDGRKIFELIREQSHLFIEVSQFDY------IPGWREEALRIGK-ASNDDLL  260 (484)
Q Consensus       189 ~~~vdl~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~p~~~~~~~~~~~-~~~~~~l  260 (484)
                      ++.+|+...+. .+++++++. +||.+.++.+++......+......  ....      +-.+..+.++... ...+|++
T Consensus       139 ~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l  215 (406)
T 1s1f_A          139 GPPADLTEAVLSPFPIAVICE-LMGVPATDRHSMHTWTQLILSSSHG--AEVSERAKNEMNAYFSDLIGLRSDSAGEDVT  215 (406)
T ss_dssp             CSSEEHHHHTTTHHHHHHHHH-HHTCCGGGHHHHHHHHHHHHHHHTT--CCCCHHHHTHHHHHHHHHHHTSCCSCCCSHH
T ss_pred             CCCccHHHHHhhHhHHHHHHH-HhCCCHHHHHHHHHHHHHHHhccCC--HHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence            23789987764 799999998 6999876555554444443332110  0000      0001122233222 2356899


Q ss_pred             HHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccC
Q 046539          261 GLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRL  340 (484)
Q Consensus       261 ~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l  340 (484)
                      +.+++...+      ..++++++.+++..+++|| |||+++++|++++|++||++|+++++|+                 
T Consensus       216 ~~ll~~~~~------~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~-----------------  271 (406)
T 1s1f_A          216 SLLGAAVGR------DEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEP-----------------  271 (406)
T ss_dssp             HHHHHHHHT------TSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCG-----------------
T ss_pred             HHHHHhhcc------cCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCH-----------------
Confidence            999876321      4689999999999999999 9999999999999999999999999984                 


Q ss_pred             hhHHHHHHHhhcCCCCcc--cccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCC
Q 046539          341 KMVGKIIYEVFRIYSPAY--LIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNN  418 (484)
Q Consensus       341 p~l~a~i~E~lRl~p~~~--~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~  418 (484)
                      .|++|||+|+||++|+++  .++|.+++|++++||.||||+.|.++.+++||||++| +||++|+||||.          
T Consensus       272 ~~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~i~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~----------  340 (406)
T 1s1f_A          272 EIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVF-PDPDRIDFERSP----------  340 (406)
T ss_dssp             GGHHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTC------------
T ss_pred             HHHHHHHHHHHhhCCCccccCcceEeCCCEEECCEEECCCCEEEeCcHHhcCCcccC-CCcceeCCCCCC----------
Confidence            489999999999999999  6999999999999999999999999999999999999 999999999985          


Q ss_pred             CCcccccCCCCCCccchHHHHHHHHHHHHHHHHhc-EEEeCCCc-ccCCCCcceeccCCCcceeee
Q 046539          419 EVSFFPFGGGPRICIGQNFALMEVKLALAMILQNF-SFQLSPTY-VHAPSSGITVYPQHGAHMILN  482 (484)
Q Consensus       419 ~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~  482 (484)
                       ..++|||.|+|.|+|++||++|++++++.|+++| +++++++. ......+.+.++..+++|++.
T Consensus       341 -~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~  405 (406)
T 1s1f_A          341 -NPHVSFGFGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKKGALIRGPEALPVTWH  405 (406)
T ss_dssp             -CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCSSCSBCCBSCCEEECC
T ss_pred             -CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCCccceeccCcccCCcceeEEeeC
Confidence             3589999999999999999999999999999999 69998763 333344566788889999874


No 37 
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00  E-value=2.1e-60  Score=459.33  Aligned_cols=366  Identities=14%  Similarity=0.177  Sum_probs=293.2

Q ss_pred             ccccchHHHHHHHhCCceEEee-CCcCeEEeCCHHHHHHHHhhCCcccCCCC--C-c----ccc-ccccceeecCCcchh
Q 046539           76 PRILPYHHHIISKYGKKSFKWM-GPRPSINVQDPKLIREILLKHDIFQKPKG--N-S----LGK-LVVNGMVTYEGEQWS  146 (484)
Q Consensus        76 ~~~~~~~~~~~~~yG~vf~~~~-~~~~~vvv~dp~~i~~vl~~~~~~~~~~~--~-~----~~~-~~g~~~~~~~~~~~~  146 (484)
                      .+|+.++.++ ++||||+++++ ++.+.++++||+++++++.++ .|++++.  . .    +.. ..+.++++.+|+.|+
T Consensus        19 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~   96 (403)
T 3aba_A           19 FLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS-SFSVQVPHALHTQDGVVTQKPGRGSLLWQDEPEHT   96 (403)
T ss_dssp             TSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT-TEESCCSCCTTSSSCCCCCCCCTTCCTTCCTTHHH
T ss_pred             cChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC-CcccccccccccccccccccccccccccCCchhHH
Confidence            4788899999 89999999997 889999999999999999875 4665531  1 1    222 246678888999999


Q ss_pred             HHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHHH-HHHHHHHHHHHhCCCccchhHHHHHH
Q 046539          147 KVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHIQ-ALAADVISRTAFGSNYDDGRKIFELI  225 (484)
Q Consensus       147 ~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~  225 (484)
                      ++|+++++.|++++++.+++.+.+.++++++.|.+.      ++.+|+..++. .+++++++. +||.+.++.+++....
T Consensus        97 ~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~------~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~~~  169 (403)
T 3aba_A           97 SDRKLLAKEFTVRRMQALRPNIQRIVDEHLDAIEAR------GGPVDLVKTFANAVPSMVISD-LFGVPVERRAEFQDIA  169 (403)
T ss_dssp             HHHHHHHHHSCHHHHHTTHHHHHHHHHHHHHHHHHH------CSCEEHHHHTTTHHHHHHHHH-HHTCCGGGHHHHHHHH
T ss_pred             HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhc------CCCccHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999751      23689987764 799999998 7999876544444333


Q ss_pred             HHHHHHHHhh--h--cccccchhHHHHHHh-ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHH
Q 046539          226 REQSHLFIEV--S--QFDYIPGWREEALRI-GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTAS  300 (484)
Q Consensus       226 ~~~~~~~~~~--~--~~~~~p~~~~~~~~~-~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~  300 (484)
                      ..+.......  .  ....+-.+..+.++. .....+|+++.+++...+     +..++++++.+++..+++||+|||++
T Consensus       170 ~~~~~~~~~p~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~-----~~~l~~~ei~~~~~~l~~AG~dTt~~  244 (403)
T 3aba_A          170 EAMMRVDQDAAATEAAGMRLGGLLYQLVQERRANPGDDLISALITTEDP-----DGVVDDMFLMNAAGTLLIAAHDTTAC  244 (403)
T ss_dssp             HHHSBSSSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHTSCCT-----TCCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhhccC-----CCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            3322110000  0  000000000111111 112356899999876431     34689999999999999999999999


Q ss_pred             HHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcc-cccccccccceecCEEeCCCC
Q 046539          301 LLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAY-LIFRTNVEETKLGDFILPPGV  379 (484)
Q Consensus       301 ~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~Ip~G~  379 (484)
                      +++|++++|++||++|+++++|+                 .|++|||+|+||++|+++ .++|.+.+|++++||.||||+
T Consensus       245 ~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt  307 (403)
T 3aba_A          245 MIGLGTALLLDSPDQLALLREDP-----------------SLVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGE  307 (403)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHCG-----------------GGHHHHHHHHHHHHCSCTTCEEEEESSCEEETTEEECTTC
T ss_pred             HHHHHHHHHHHCHHHHHHHHhCH-----------------HHHHHHHHHHHhcCCCcccccceEeCCCeEECCEEECCCC
Confidence            99999999999999999999983                 589999999999999999 689999999999999999999


Q ss_pred             eEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhc-EEEeC
Q 046539          380 LLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNF-SFQLS  458 (484)
Q Consensus       380 ~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~  458 (484)
                      .|.++.+++||||++| +||++|+||||.           ..++|||.|+|.|+|++||++|++++++.|+++| ++++.
T Consensus       308 ~V~~~~~~~~rdp~~~-~dp~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~  375 (403)
T 3aba_A          308 QVVAHVLAADFDPAFV-EEPERFDITRRP-----------APHLAFGFGAHQCIGQQLARIELQIVFETLFRRLPGLRLA  375 (403)
T ss_dssp             EEEECHHHHTTCTTTS-SSTTSCCTTSCC-----------CCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHSTTCEES
T ss_pred             EEEechhhhCCChhhC-CCccccCCCCCC-----------CCccCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceec
Confidence            9999999999999999 999999999983           3589999999999999999999999999999999 59987


Q ss_pred             CCc-ccCCCCcceeccCCCcceeeecC
Q 046539          459 PTY-VHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       459 ~~~-~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      ++. ......+.+.++..+++|++++|
T Consensus       376 ~~~~~~~~~~~~~~~~~~~lpv~~~~r  402 (403)
T 3aba_A          376 KPVEELRFRHDMVFYGVHELPVTWHHH  402 (403)
T ss_dssp             SCGGGSCBCTTBSSCCBSCCEEECCCC
T ss_pred             CCccccccccCcccCCcceeEEEecCC
Confidence            642 22334456678889999999987


No 38 
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00  E-value=5e-61  Score=467.65  Aligned_cols=364  Identities=17%  Similarity=0.200  Sum_probs=289.2

Q ss_pred             cccchHHHHHHHhCCceEEee-CCcCeEEeCCHHHHHHHHhhCCcccCCCC-Cccc-----c-c---cc------cceee
Q 046539           77 RILPYHHHIISKYGKKSFKWM-GPRPSINVQDPKLIREILLKHDIFQKPKG-NSLG-----K-L---VV------NGMVT  139 (484)
Q Consensus        77 ~~~~~~~~~~~~yG~vf~~~~-~~~~~vvv~dp~~i~~vl~~~~~~~~~~~-~~~~-----~-~---~g------~~~~~  139 (484)
                      +|+.++.++++ ||||+++++ |+.+.|+++|++++++++.+++.|+.++. ..+.     . +   .|      .++++
T Consensus        26 ~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~~fs~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~  104 (428)
T 1cpt_A           26 VIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQPGLFSNAEGSEILYDQNNEAFMRSISGGCPHVIDSLTS  104 (428)
T ss_dssp             HHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCTTTEESSSSCSSCCCHHHHHHHHHHTTTSSCSSCCGGG
T ss_pred             CccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCchhccCccccccCCcccccchhcccccccccccccccc
Confidence            57888998876 799999998 67899999999999999987666776654 2221     2 3   43      46788


Q ss_pred             cCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHH-HHHHHHHHHHHHhCCCccch
Q 046539          140 YEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHI-QALAADVISRTAFGSNYDDG  218 (484)
Q Consensus       140 ~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~  218 (484)
                      .+|+.|+++|+++++.|++++++++++.+.++++++++.|.+      .++.+|+...+ ..+++++++.+ ||.+.++.
T Consensus       105 ~~g~~~~~~Rr~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~------~~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~  177 (428)
T 1cpt_A          105 MDPPTHTAYRGLTLNWFQPASIRKLEENIRRIAQASVQRLLD------FDGECDFMTDCALYYPLHVVMTA-LGVPEDDE  177 (428)
T ss_dssp             CCTTHHHHHHHHHHTTSSHHHHGGGHHHHHHHHHHHHHHHHT------SSSEEEHHHHTTTTHHHHHHHHH-HTCCGGGH
T ss_pred             CChHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHH------hCCCeehHHHHHhhhHHHHHHHH-cCCCHhHH
Confidence            899999999999999999999999999999999999999873      22478998655 57999999998 99987654


Q ss_pred             hHHHHHHHHHHHHHHhhhcc----ccc-chh-H-------------HHHHHhc-cCCchhHHHHHHHhhhHhhHHhhcCC
Q 046539          219 RKIFELIREQSHLFIEVSQF----DYI-PGW-R-------------EEALRIG-KASNDDLLGLLMESNYKEIQEKEAGM  278 (484)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~----~~~-p~~-~-------------~~~~~~~-~~~~~~~l~~ll~~~~~~~~~~~~~l  278 (484)
                      +++......+..........    ..+ |.+ .             .+.++.. ....+|+++.+++...+     +..+
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~-----~~~l  252 (428)
T 1cpt_A          178 PLMLKLTQDFFGVHEPDEQAVAAPRQSADEAARRFHETIATFYDYFNGFTVDRRSCPKDDVMSLLANSKLD-----GNYI  252 (428)
T ss_dssp             HHHHHHHHTTTCC----------------CHHHHHHHHHHHHHHHHHHHHHHHTTSCCSSHHHHHHHCBSS-----SSBC
T ss_pred             HHHHHHHHHHHhcccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHhcccc-----CCCC
Confidence            44444333322111110000    011 111 1             1111111 12356899999876431     2358


Q ss_pred             CHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcc
Q 046539          279 SIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAY  358 (484)
Q Consensus       279 ~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~  358 (484)
                      +++++.+++..+++||+|||+++++|++++|++||++|+++++|+                 .|++|||+|+||++|+++
T Consensus       253 s~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~  315 (428)
T 1cpt_A          253 DDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSDP-----------------ALIPRLVDEAVRWTAPVK  315 (428)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG-----------------GGHHHHHHHHHHHHCCBC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhH-----------------HHHHHHHHHHHHhCCccc
Confidence            999999999999999999999999999999999999999999984                 389999999999999999


Q ss_pred             cccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHH
Q 046539          359 LIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFA  438 (484)
Q Consensus       359 ~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la  438 (484)
                      .++|.+++|++++||.||||+.|.++.+++||||++| +||++|+||||.           ..++|||.|+|.|+|++||
T Consensus       316 ~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA  383 (428)
T 1cpt_A          316 SFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVF-SNPDEFDITRFP-----------NRHLGFGWGAHMCLGQHLA  383 (428)
T ss_dssp             CCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTC-SSTTSCCTTCCS-----------CCCCTTCCSTTCCTTHHHH
T ss_pred             ccceeeCCCeeECCEEECCCCEEEeCHHHhCCChhhC-CChhhcCCCCCC-----------CCCCCCCCCCCCCCcHHHH
Confidence            9899999999999999999999999999999999999 999999999984           1389999999999999999


Q ss_pred             HHHHHHHHHHHHHhcE-EEeCCCcccCCCCcceeccCCCcceeeecC
Q 046539          439 LMEVKLALAMILQNFS-FQLSPTYVHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       439 ~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      ++|++++++.|+++|+ +++.+....  ......+...+++|+++||
T Consensus       384 ~~e~~~~l~~ll~~f~~~~~~~~~~~--~~~~~~~~~~~lpv~~~p~  428 (428)
T 1cpt_A          384 KLEMKIFFEELLPKLKSVELSGPPRL--VATNFVGGPKNVPIRFTKA  428 (428)
T ss_dssp             HHHHHHHHHHHGGGEEEEEESSCCEE--CCCSSBCSEEECEEEEEEC
T ss_pred             HHHHHHHHHHHHHhCCCceeCCCccc--ccCccccCcceeeEEeeCC
Confidence            9999999999999997 888743222  3334455566899999986


No 39 
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00  E-value=1.1e-60  Score=475.39  Aligned_cols=396  Identities=15%  Similarity=0.157  Sum_probs=299.5

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCC-ceEEeeCCcCe-------EEeCCHHHH
Q 046539           40 GFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGK-KSFKWMGPRPS-------INVQDPKLI  111 (484)
Q Consensus        40 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~-vf~~~~~~~~~-------vvv~dp~~i  111 (484)
                      .||||+++|++|+++++....             +..+++.++.++++|||+ ||++++++.++       +++++++..
T Consensus        29 ~pPGp~g~P~iG~~~~~~~~~-------------~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~   95 (495)
T 3dsk_A           29 NIPGNYGLPIVGPIKDRWDYF-------------YDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSF   95 (495)
T ss_dssp             CCCCCCCSTTHHHHHHHHHHH-------------TTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTG
T ss_pred             CCCCCCCCCccchHHHHHHHH-------------HhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcce
Confidence            799999999999999887521             124788899999999999 99999999888       666777766


Q ss_pred             HHHHhhCC-----cccCCCCCccccccc----cceeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHH
Q 046539          112 REILLKHD-----IFQKPKGNSLGKLVV----NGMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEI  182 (484)
Q Consensus       112 ~~vl~~~~-----~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~  182 (484)
                      +.++....     .+........ .++|    .+++..+|+.|+++|+++.+.|++.. +.+++.+++.++++++.|.+.
T Consensus        96 ~~l~~~~~v~k~~~~~~~~~~~~-~l~g~~~~~~~~~~~g~~h~~~R~~~~~~f~~~~-~~~~~~i~~~~~~ll~~~~~~  173 (495)
T 3dsk_A           96 PVLFDVDKVEKKDLLTGTYMPST-ELTGGYRILSYLDPSEPKHEKLKNLLFFLLKSSR-NRIFPEFQATYSELFDSLEKE  173 (495)
T ss_dssp             GGGGCTTTEECSSCTTSSSCCCG-GGGTTCCCGGGCCTTSHHHHHHHHHHHHHHHHTT-TTHHHHHHHHHHHHHHHHHHH
T ss_pred             eeecccccccccccccccCCCCc-cccCCCcceeeeCCCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence            65554321     1111111123 5555    23556789999999999999998765 889999999999999999864


Q ss_pred             HhcCCCCcccchHHHHHHHHHHHHHHHHhCCCccch---hHHHHHHHHHHHHHHhhhcccccchhHHHHHHhccCC----
Q 046539          183 AASDEESFELDIWPHIQALAADVISRTAFGSNYDDG---RKIFELIREQSHLFIEVSQFDYIPGWREEALRIGKAS----  255 (484)
Q Consensus       183 ~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~----  255 (484)
                      ..   ++..+|+.+++..+++++++.++||.+....   ++....................+|.+....+......    
T Consensus       174 ~~---~~~~vdl~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~~~~~~~~~~~~~~~  250 (495)
T 3dsk_A          174 LS---LKGKADFGGSSDGTAFNFLARAFYGTNPADTKLKADAPGLITKWVLFNLHPLLSIGLPRVIEEPLIHTFSLPPAL  250 (495)
T ss_dssp             HH---HHSSEESHHHHHHHHHHHHHHHHHSCCGGGSTTTTCHHHHHHHHHHHHHGGGCCCSSCHHHHHHHHSSSCCCGGG
T ss_pred             hc---cCCCccHHHHHHHHHHHHHHHHHcCCCcchhhhhhhHHHHHHHHHHHhhhhHhHhccHHHHHHHHHHhhcccchh
Confidence            33   2347999999999999999999999876543   1122222222211111111124555443332221110    


Q ss_pred             ----ch-------hHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHH-hcccccHHHHHHHHHHHHhc-ChHHHHHHHHH
Q 046539          256 ----ND-------DLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFY-LAGQETTASLLVWVLIMLCM-HPIWQERARQE  322 (484)
Q Consensus       256 ----~~-------~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~-~aG~~tt~~~l~~~l~~L~~-~p~~~~~l~~E  322 (484)
                          .+       +.++.+++..      .+.+++++|+..+++.++ +||+|||+.+++|++++|+. ||++|+++++|
T Consensus       251 ~~~~~~~~~~~~~~~~~~ll~~~------~~~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~~~P~~~~~lr~E  324 (495)
T 3dsk_A          251 VKSDYQRLYEFFLESAGEILVEA------DKLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEE  324 (495)
T ss_dssp             GHHHHHHHHHHHHHHCHHHHHHH------HHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHH------HhCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence                11       1222333332      235799999998777665 99999999999999999996 99999999999


Q ss_pred             HHHHhC--CCCCChhhhccChhHHHHHHHhhcCCCCccccccccccccee----cCEEeCCCCeEEechhhhhcCCCCcc
Q 046539          323 VFQVLG--NKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKL----GDFILPPGVLLSLPIILVHHDHEYWG  396 (484)
Q Consensus       323 i~~~~~--~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i----~g~~Ip~G~~v~~~~~~~~~d~~~~g  396 (484)
                      ++++++  +..++++++++|||++|||+|+||++|+++...|++++|+++    +||.||||+.|+++.+++||||++| 
T Consensus       325 i~~~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~~~~dp~~~-  403 (495)
T 3dsk_A          325 IRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIF-  403 (495)
T ss_dssp             HHHHHHHTTTCCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEEEEHHHHHTCTTTS-
T ss_pred             HHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhcCCCccccceeecCCeEeccCCCceEECCCCEEEeccHHhhCCcccC-
Confidence            999987  367899999999999999999999999999977889999999    5999999999999999999999999 


Q ss_pred             CCCCCCCCCCCCCcchhhhc-----CCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCC
Q 046539          397 DDAKAFNPDRFSEGVSKAAK-----NNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPT  460 (484)
Q Consensus       397 ~~p~~F~P~R~l~~~~~~~~-----~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~  460 (484)
                      +||++|+|+||++.++....     +....++|||+|+|.|+|++||++|++++++.|+++|++...++
T Consensus       404 ~dp~~F~P~Rfl~~~~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~  472 (495)
T 3dsk_A          404 DRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIEV  472 (495)
T ss_dssp             TTTTSCCTTTTCHHHHHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             CCccccCCcccCCCCccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCceEeCCC
Confidence            99999999999986332110     00123555566669999999999999999999999999876543


No 40 
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=4.9e-61  Score=464.61  Aligned_cols=368  Identities=18%  Similarity=0.231  Sum_probs=293.0

Q ss_pred             ccccchHHHHHHHhCCceEEee-CCcCeEEeCCHHHHHHHHhhCCcccCCC-CCc------cc---cc----c-ccceee
Q 046539           76 PRILPYHHHIISKYGKKSFKWM-GPRPSINVQDPKLIREILLKHDIFQKPK-GNS------LG---KL----V-VNGMVT  139 (484)
Q Consensus        76 ~~~~~~~~~~~~~yG~vf~~~~-~~~~~vvv~dp~~i~~vl~~~~~~~~~~-~~~------~~---~~----~-g~~~~~  139 (484)
                      .+|+.++.++ ++|||||++++ ++.+.|+++||+++++++.++. +++.+ ...      ..   .+    . +.++++
T Consensus        17 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   94 (411)
T 1gwi_A           17 TDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR-LVKDINVWGAWRRGEIPADWPLIGLANPGRSMLT   94 (411)
T ss_dssp             SCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT-EECCGGGCHHHHTTCSCTTCTTHHHHSCCSSGGG
T ss_pred             CChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc-cccCcccccccccccCCcccchhhhhcccccccc
Confidence            4677889999 99999999998 7889999999999999998764 34433 111      00   11    2 456888


Q ss_pred             cCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHHH-HHHHHHHHHHHhCCCccch
Q 046539          140 YEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHIQ-ALAADVISRTAFGSNYDDG  218 (484)
Q Consensus       140 ~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~~-~~~~~~i~~~~fG~~~~~~  218 (484)
                      .+|+.|+++|+++.+.|++++++.+++.+.+.++++++.|.+      .+..+|+..++. .+++++++. +||.+.++.
T Consensus        95 ~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~------~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~  167 (411)
T 1gwi_A           95 VDGAEHRRLRTLVAQALTVRRVEHMRGRITELTDRLLDELPA------DGGVVDLKAAFAYPLPMYVVAD-LMGIEEARL  167 (411)
T ss_dssp             CCHHHHHHHHHHHTTTSCHHHHHTTHHHHHHHHHHHHHTSCC------SCCCEEHHHHTTTHHHHHHHHH-HHTCCGGGH
T ss_pred             CCcHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH------cCCCcchHHHHhhHHHHHHHHH-HhCCCHHHH
Confidence            899999999999999999999999999999999999998852      234799988876 599999996 799987654


Q ss_pred             hHHHHHHHHHHHHHHhhh-ccc---ccchhHHHHHHh-ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhc
Q 046539          219 RKIFELIREQSHLFIEVS-QFD---YIPGWREEALRI-GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLA  293 (484)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~-~~~---~~p~~~~~~~~~-~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~a  293 (484)
                      +++......+........ ...   .+-.+..+.++. .....+|+++.+++...+     +..++++++.+++..+++|
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~-----~~~l~~~~i~~~~~~~~~A  242 (411)
T 1gwi_A          168 PRLKVLFEKFFSTQTPPEEVVATLTELASIMTDTVAAKRAAPGDDLTSALIQASEN-----GDHLTDAEIVSTLQLMVAA  242 (411)
T ss_dssp             HHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBT-----TBCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhccc-----CCCCCHHHHHHHHHHHHHH
Confidence            444444433322100000 000   000000111111 112357899999876432     3468999999999999999


Q ss_pred             ccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCccc-ccccccccceecC
Q 046539          294 GQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYL-IFRTNVEETKLGD  372 (484)
Q Consensus       294 G~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g  372 (484)
                      |+|||+++++|++++|++||++|+++++|                 .+|++|||+|+||++|+++. ++|.+++|++++|
T Consensus       243 G~dTt~~~l~~~l~~L~~~P~~~~~l~~e-----------------~~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G  305 (411)
T 1gwi_A          243 GHETTISLIVNAVVNLSTHPEQRALVLSG-----------------EAEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGD  305 (411)
T ss_dssp             HHHHHHHHHHHHHHHHHHCHHHHHHHHTT-----------------SSCHHHHHHHHHHHSCSBCCEEEEEESSCEEETT
T ss_pred             HhhHHHHHHHHHHHHHHhChHHHHHHHcC-----------------hHHHHHHHHHHHHhCCcccCCceeeeCCCeEECC
Confidence            99999999999999999999999999987                 35799999999999999995 8999999999999


Q ss_pred             EEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHh
Q 046539          373 FILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQN  452 (484)
Q Consensus       373 ~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~  452 (484)
                      |.||||+.|.++.+++||||++||+||++|+||||.+          ..++|||.|+|.|+|++||++|++++++.|+++
T Consensus       306 ~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~----------~~~lpFG~G~r~C~G~~lA~~e~~~~l~~ll~~  375 (411)
T 1gwi_A          306 RVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG----------NRHISFGHGPHVCPGAALSRMEAGVALPALYAR  375 (411)
T ss_dssp             EEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS----------SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHH
T ss_pred             EEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCCC----------CCcccCCCCcccCCCHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999952          468999999999999999999999999999999


Q ss_pred             c-EEEeCCC-cccCCCCcceeccCCCcceeeecC
Q 046539          453 F-SFQLSPT-YVHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       453 f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      | ++++..+ .......+.+.++..+++|+++||
T Consensus       376 f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~r  409 (411)
T 1gwi_A          376 FPHLDLAVPAAELRNKPVVTQNDLFELPVRLAHH  409 (411)
T ss_dssp             CTTCEESSCGGGCCBCSCTTBCCBSCCEEESSCC
T ss_pred             CccceeCCCcccccccccccccCcceeEEEecCC
Confidence            9 7998743 233334456678889999999987


No 41 
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00  E-value=1e-60  Score=462.59  Aligned_cols=367  Identities=16%  Similarity=0.170  Sum_probs=292.6

Q ss_pred             cccccchHHHHHHHhCCce-----EEeeCCcCeEEeCCHHHHHHHHhhCCcccCCCCCc--cc--c----ccccceeecC
Q 046539           75 VPRILPYHHHIISKYGKKS-----FKWMGPRPSINVQDPKLIREILLKHDIFQKPKGNS--LG--K----LVVNGMVTYE  141 (484)
Q Consensus        75 ~~~~~~~~~~~~~~yG~vf-----~~~~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~--~~--~----~~g~~~~~~~  141 (484)
                      ..+|+.++.++ ++|||||     ++++  .+.++++||+++++++.++..|++++...  +.  .    ..+.++++.+
T Consensus        24 ~~~p~~~~~~l-~~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~  100 (414)
T 2uuq_A           24 WPNPWPMYRAL-RDHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDHQTFSSAQGLTVNYGELEMIGLHDTPPMVMQD  100 (414)
T ss_dssp             TTCCHHHHHHH-HHHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCTTTEESTTCSSSCTTHHHHHTCSSSCCGGGCC
T ss_pred             ccCchHHHHHH-HhcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCchhccCCCCcccccCcccccccccccccccCC
Confidence            46888999998 4799998     7776  67999999999999998866677765432  21  2    3366788889


Q ss_pred             CcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHH-HHHHHHHHHHHHHHhCCCccchhH
Q 046539          142 GEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWP-HIQALAADVISRTAFGSNYDDGRK  220 (484)
Q Consensus       142 ~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~-~~~~~~~~~i~~~~fG~~~~~~~~  220 (484)
                      |+.|+++|+++.+.|++++++++.+.+.+.++++++.|.+      . +.+|+.. .+..+++++++. +||.+.++.++
T Consensus       101 g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~------~-~~vdl~~~~~~~~~~~vi~~-~~G~~~~~~~~  172 (414)
T 2uuq_A          101 PPVHTEFRKLVSRGFTPRQVETVEPTVRKFVVERLEKLRA------N-GGGDIVTELFKPLPSMVVAH-YLGVPEEDWTQ  172 (414)
T ss_dssp             TTHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHH------T-TEEEHHHHTTTHHHHHHHHH-HTTCCGGGHHH
T ss_pred             chhHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHh------c-CCccHHHHHHHHhHHHHHHH-HhCCCHHHHHH
Confidence            9999999999999999999999999999999999999975      2 2599974 457999999999 79998765444


Q ss_pred             HHHHHHHHHHHHHh-hhcccccchh------HHHHHHhc-cCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHh
Q 046539          221 IFELIREQSHLFIE-VSQFDYIPGW------REEALRIG-KASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYL  292 (484)
Q Consensus       221 ~~~~~~~~~~~~~~-~~~~~~~p~~------~~~~~~~~-~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~  292 (484)
                      +......+...... ..........      ..+.++.. ....+|+++.+++...++   .+..++++++.+++..+++
T Consensus       173 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~---~~~~ls~~ei~~~~~~l~~  249 (414)
T 2uuq_A          173 FDGWTQAIVAANAVDGATTGALDAVGSMMAYFTGLIERRRTEPADDAISHLVAAGVGA---DGDTAGTLSILAFTFTMVT  249 (414)
T ss_dssp             HHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHHTTSCCSSHHHHHHHTTTTC---TTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhcccCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhccccc---CCCCCCHHHHHHHHHHHHH
Confidence            44443333221000 0000000000      01122221 223578999998764310   1234789999999999999


Q ss_pred             cccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecC
Q 046539          293 AGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGD  372 (484)
Q Consensus       293 aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g  372 (484)
                      ||+|||+++++|++++|++||++|+++++|+                 +|++|||+|+||++|+++.++|.+++|++++|
T Consensus       250 AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~G  312 (414)
T 2uuq_A          250 GGNDTVTGMLGGSMPLLHRRPDQRRLLLDDP-----------------EGIPDAVEELLRLTSPVQGLARTTTRDVTIGD  312 (414)
T ss_dssp             HHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG-----------------GGHHHHHHHHHHHHCSBCCEEEEESSCEEETT
T ss_pred             hhHHHHHHHHHHHHHHHHhCHHHHHHHHhCH-----------------HHHHHHHHHHHHhCCCcCCcceEECCCEEECC
Confidence            9999999999999999999999999999984                 69999999999999999998999999999999


Q ss_pred             EEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHh
Q 046539          373 FILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQN  452 (484)
Q Consensus       373 ~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~  452 (484)
                      |.||||+.|.++.+++||||++||+||++|+||||.           ..++|||.|+|.|+|++||++|++++++.|+++
T Consensus       313 ~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~-----------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~  381 (414)
T 2uuq_A          313 TTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCP-----------RNILTFSHGAHHCLGAAAARMQCRVALTELLAR  381 (414)
T ss_dssp             EEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCC-----------CSCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHH
T ss_pred             EEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCC-----------CCCcCCCCCCccCCCHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999984           358999999999999999999999999999999


Q ss_pred             c-EEEeCCCcccCCCCcceeccCCCcceeeecC
Q 046539          453 F-SFQLSPTYVHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       453 f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      | +++++++ ......+.+.++..+++|+++||
T Consensus       382 f~~~~l~~~-~~~~~~~~~~~~~~~lpv~~~~r  413 (414)
T 2uuq_A          382 CPDFEVAES-RIVWSGGSYVRRPLSVPFRVTSS  413 (414)
T ss_dssp             CCSEEECGG-GCEECCCSSBCCEEECEEEEC--
T ss_pred             CcccEECCC-CccccccccccCcceeEEEecCC
Confidence            9 6999843 22234456678888999999987


No 42 
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00  E-value=4.7e-61  Score=468.48  Aligned_cols=373  Identities=18%  Similarity=0.256  Sum_probs=286.8

Q ss_pred             cccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCCcccCCCCCc-ccccccc-ceeecCCcchhHHHhhh
Q 046539           75 VPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHDIFQKPKGNS-LGKLVVN-GMVTYEGEQWSKVRKIA  152 (484)
Q Consensus        75 ~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~-~~~~~g~-~~~~~~~~~~~~~R~~~  152 (484)
                      ..+|+.+++++ ++|||||++..++  .++|++|+++++++.+++.|++.+... ....++. ++++.+|+.|+++|+++
T Consensus        52 ~~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~l~~~dg~~h~~~Rr~~  128 (441)
T 3nc3_A           52 QNNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPDIFTTKSLVERAEPVMRGPVLAQMHGKEHSAKRRIV  128 (441)
T ss_dssp             HHCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTTTEECCCTTSCCCCSCC-------------CCHHHH
T ss_pred             hcChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCcccccccccccccccccCCCccccCCcHHHHHHHHHH
Confidence            35788899887 6899999887655  899999999999998877677765443 3445555 47889999999999999


Q ss_pred             ccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHH-HHHHHHHHHHHHhCCCccchhHHHHHHHHHHHH
Q 046539          153 NPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHI-QALAADVISRTAFGSNYDDGRKIFELIREQSHL  231 (484)
Q Consensus       153 ~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~  231 (484)
                      .+.|+++.++.+++.+.+.++++++.|.       ++..+|+...+ ..+++++++. +||.+.++.+++..+...+...
T Consensus       129 ~~~fs~~~l~~~~~~i~~~~~~ll~~l~-------~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~~~~~~~~~~~~~~  200 (441)
T 3nc3_A          129 VRSFIGDALDHLSPLIKQNAENLLAPYL-------ERGKSDLVNDFGKTFAVCVTMD-MLGLDKRDHEKISEWHSGVADF  200 (441)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHHHHHTTTT-------TTTEEECCCCCHHHHHHHHHHH-HTTCCGGGHHHHHHHHHHHHHH
T ss_pred             HhhcCHHHHHHHHHHHHHHHHHHHHHHH-------hcCCCcHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999886       23468875444 5689999998 6898876655555555554443


Q ss_pred             HHhhhcccc-----------cchhHHHHHHh-ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHH
Q 046539          232 FIEVSQFDY-----------IPGWREEALRI-GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTA  299 (484)
Q Consensus       232 ~~~~~~~~~-----------~p~~~~~~~~~-~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~  299 (484)
                      .........           +-.+....++. .....+|+++.|++...+     +..++++++.+++..+++||+|||+
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~~~Dll~~Ll~~~~~-----~~~ls~~el~~~~~~ll~AG~eTTa  275 (441)
T 3nc3_A          201 ITSISQSPEARAHSLWCSEQLSQYLMPVIKERRVNPGSDLISILCTSEYE-----GMALSDKDILALILNVLLAATEPAD  275 (441)
T ss_dssp             HHCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSSHHHHHCC-----------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhcc-----CCCCCHHHHHHHHHHHHHhhhHHHH
Confidence            321100000           00000112222 223467899998875432     3469999999999999999999999


Q ss_pred             HHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCC
Q 046539          300 SLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGV  379 (484)
Q Consensus       300 ~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~  379 (484)
                      ++++|++++|++||++|+++++|                 ++|+++||+|+||++|+++.++|.+++|++++||.||||+
T Consensus       276 ~~l~~~l~~L~~~P~~~~~l~~E-----------------~~~l~a~i~E~LRl~pp~~~~~R~~~~d~~l~G~~Ip~Gt  338 (441)
T 3nc3_A          276 KTLALMIYHLLNNPEQMNDVLAD-----------------RSLVPRAIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDT  338 (441)
T ss_dssp             HHHHHHHHHHHTSHHHHHHHHHC-----------------GGGHHHHHHHHHHHSCSBCEEEEEESSCEESSSCEECTTC
T ss_pred             HHHHHHHHHHHhCHHHHHHHHhC-----------------HHHHHHHHHHhhhcCCcccCccEEECCCEEECCEEECCCC
Confidence            99999999999999999999998                 4899999999999999999999999999999999999999


Q ss_pred             eEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhc-EEEeC
Q 046539          380 LLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNF-SFQLS  458 (484)
Q Consensus       380 ~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~  458 (484)
                      .|.++.+++||||++| +||++|+||||+.+.......+ ..++|||.|+|.|+|++||++|++++++.|+++| +++++
T Consensus       339 ~V~~~~~~~~rdp~~f-~dP~~F~PeR~~~~~~~~~~~~-~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~  416 (441)
T 3nc3_A          339 IVFCMIGAANRDPEAF-EQPDVFNIHREDLGIKSAFSGA-ARHLAFGSGIHNCVGTAFAKNEIEIVANIVLDKMRNIRLE  416 (441)
T ss_dssp             EEEEEHHHHHTCTTTS-SSTTSCCTTCTTSCGGGTTSSS-CSSCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSTTCEEC
T ss_pred             EEEechHHhcCChhhC-CCcccCCCCCCCcccccccCCC-CCcccCCCCCccCCCHHHHHHHHHHHHHHHHHhCcccEEC
Confidence            9999999999999999 9999999999987644322223 6899999999999999999999999999999999 89998


Q ss_pred             CCcccCCCCcceeccCCCcceeeec
Q 046539          459 PTYVHAPSSGITVYPQHGAHMILNK  483 (484)
Q Consensus       459 ~~~~~~~~~~~~~~~~~~~~v~~~~  483 (484)
                      ++. .....+.+++....++|+++|
T Consensus       417 ~~~-~~~~~~~~~~~~~~lpv~~~~  440 (441)
T 3nc3_A          417 EDF-CYAESGLYTRGPVSLLVAFDG  440 (441)
T ss_dssp             TTC-CCCEECSSBCEESCCEEECC-
T ss_pred             CCC-cccccCccccCcceeEEEEec
Confidence            763 333455667888899999876


No 43 
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00  E-value=6.6e-61  Score=463.68  Aligned_cols=378  Identities=13%  Similarity=0.110  Sum_probs=303.1

Q ss_pred             hcCCCCCCCCCCC--CCHHHHHHHHHhhccCCCCCCCC-ccccccchHHHHHHHhC--CceEEe-eCCcCeEEeCCHHHH
Q 046539           38 QQGFSGNSYKIFH--GDTKDMSMMLKEAKARPISLSDD-IVPRILPYHHHIISKYG--KKSFKW-MGPRPSINVQDPKLI  111 (484)
Q Consensus        38 ~~~~Pgp~~~p~~--G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~yG--~vf~~~-~~~~~~vvv~dp~~i  111 (484)
                      .+.+|||.+.|..  +.+..+              ... +..+|+.++.+|+ +||  |||+++ +|  +.++++|++++
T Consensus        10 ~~~~~~p~~~p~~~~~~~~~~--------------~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g--~~vvv~~~~~v   72 (415)
T 2zwu_A           10 ANLAPLPPHVPEHLVFDFDMY--------------NPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG--GHWIATRGQLI   72 (415)
T ss_dssp             -CCCCCCTTSCGGGBCCCCTT--------------SCTTGGGCHHHHHHGGG-STTSCSEEEECGGG--CEEEECSHHHH
T ss_pred             cccCCCCCCCCcccccccCcC--------------ChhhcccChHHHHHHHH-hcCCCCeEEecCCC--CeEEEcCHHHH
Confidence            3467899988764  432111              122 3467889999995 899  999998 55  69999999999


Q ss_pred             HHHHhhCCcccCCC-CCc-cccccccc-eeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCC
Q 046539          112 REILLKHDIFQKPK-GNS-LGKLVVNG-MVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEE  188 (484)
Q Consensus       112 ~~vl~~~~~~~~~~-~~~-~~~~~g~~-~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~  188 (484)
                      ++++.+.+.|++++ ... ....++.+ +++.+|+.|+++|+++.+.|++.+++.+.+.+.++++++++.|.+       
T Consensus        73 ~~vl~~~~~f~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~-------  145 (415)
T 2zwu_A           73 REAYEDYRHFSSECPFIPREAGEAYDFIPTSMDPPEQRQFRALANQVVGMPVVDKLENRIQELACSLIESLRP-------  145 (415)
T ss_dssp             HHHHHCTTTEETTSCSSSHHHHHHCCCTTTTCCTTTTHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHGG-------
T ss_pred             HHHHcCccccCCCcccCCCCccccccccCccCCCcHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHh-------
Confidence            99998655677765 222 22223667 888899999999999999999999999999999999999999873       


Q ss_pred             CcccchHHHH-HHHHHHHHHHHHhCCCccchhHHHHHHHHHHHHHHhhhcccccch-hH----------HHHHHh-ccCC
Q 046539          189 SFELDIWPHI-QALAADVISRTAFGSNYDDGRKIFELIREQSHLFIEVSQFDYIPG-WR----------EEALRI-GKAS  255 (484)
Q Consensus       189 ~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~----------~~~~~~-~~~~  255 (484)
                      .+.+|+..++ ..+++++++.+ ||.+.++.+++......+...        ..|. ..          .+.++. ....
T Consensus       146 ~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~~~~~~~~~~~~~--------~~P~~~~~~~~~~~~~~~~~i~~r~~~~  216 (415)
T 2zwu_A          146 QGQCNFTEDYAEPFPIRIFMLL-AGLPEEDIPHLKYLTDQMTRP--------DGSMTFAEAKEALYDYLIPIIEQRRQKP  216 (415)
T ss_dssp             GTEEEHHHHTTTHHHHHHHHHH-HTCCGGGHHHHHHHHHHHHSC--------CSSSCHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             cCCccHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhc--------cCHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            1369999865 78999999998 999876554544444333221        0121 10          111111 1123


Q ss_pred             chhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChh
Q 046539          256 NDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFD  335 (484)
Q Consensus       256 ~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~  335 (484)
                      .+|+++.+++...+     +..++++++..++..+++||+|||+++++|++++|++||++|+++++|+            
T Consensus       217 ~~dll~~ll~~~~~-----~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~------------  279 (415)
T 2zwu_A          217 GTDAISIVANGQVN-----GRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERP------------  279 (415)
T ss_dssp             CSSHHHHHHTCEET-----TEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHCG------------
T ss_pred             CCCHHHHHHHhhhc-----CCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHhCH------------
Confidence            56899999876421     2358999999999999999999999999999999999999999999984            


Q ss_pred             hhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhh
Q 046539          336 ELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAA  415 (484)
Q Consensus       336 ~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~  415 (484)
                           .|++|||+|+||++|+++.+ |.+++|++++||.||||+.|.++.+++||||++| +||++|+||||-       
T Consensus       280 -----~~l~a~i~E~lRl~p~~~~~-R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-------  345 (415)
T 2zwu_A          280 -----ERIPAACEELLRRFSLVADG-RILTSDYEFHGVQLKKGDQILLPQMLSGLDEREN-ACPMHVDFSRQK-------  345 (415)
T ss_dssp             -----GGHHHHHHHHHHHTCCBCCE-EEESSCEEETTEEECTTCEEECCHHHHHHCTTTS-SSTTSCCTTCSS-------
T ss_pred             -----HHHHHHHHHHHhhcCCcCCc-eeeCCCEEECCEEECCCCEEEeCchhhCCCchhC-CCccccCCCCCC-------
Confidence                 38999999999999999998 9999999999999999999999999999999999 999999999951       


Q ss_pred             cCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcE-EEeCCCcccCCCCcceeccCCCcceeeecC
Q 046539          416 KNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFS-FQLSPTYVHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       416 ~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                          ..++|||.|+|.|+|++||++|++++++.|+++|+ ++++++.... ..+.+.++..+++|+++||
T Consensus       346 ----~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~-~~~~~~~~~~~lpv~~~~r  410 (415)
T 2zwu_A          346 ----VSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQ-HKSGIVSGVQALPLVWDPA  410 (415)
T ss_dssp             ----CCCCTTCCGGGCCSSHHHHHHHHHHHHHHHHHHCCSCEECTTCCCC-EECSSBCEESCCEEECCGG
T ss_pred             ----CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCCCEECCCcccc-cCCccccCcceeEEEEecC
Confidence                46899999999999999999999999999999998 9998742221 3355677788999999886


No 44 
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00  E-value=9.4e-60  Score=456.06  Aligned_cols=382  Identities=16%  Similarity=0.210  Sum_probs=295.5

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHh-CCceEEee-CCcCeEEeCCHHHHHHHHhh
Q 046539           40 GFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKY-GKKSFKWM-GPRPSINVQDPKLIREILLK  117 (484)
Q Consensus        40 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y-G~vf~~~~-~~~~~vvv~dp~~i~~vl~~  117 (484)
                      .+|+|+..|.+...                  ..+..+|+.++.++ ++| ||||++++ ++.+.|+++||+++++++.+
T Consensus         6 ~~~~~~~~P~~~~~------------------~~~~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~   66 (412)
T 2zbx_A            6 TTPQTTDAPAFPSN------------------RSCPYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGD   66 (412)
T ss_dssp             --CCCCSSCBSSCC------------------CSSTTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCC------------------chhccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcC
Confidence            46888777754211                  23345788899999 788 99999998 88899999999999999987


Q ss_pred             CCcccCCCC---Cc-cc----cc--cccceeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCC
Q 046539          118 HDIFQKPKG---NS-LG----KL--VVNGMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDE  187 (484)
Q Consensus       118 ~~~~~~~~~---~~-~~----~~--~g~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~  187 (484)
                      +. +++.+.   .. ..    .+  .+.++++.+|+.|+++|+++.+.|++++++.+++.+.+.++++++.|.+      
T Consensus        67 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~------  139 (412)
T 2zbx_A           67 PR-LSSNRTDDNFPATSPRFEAVRESPQAFIGLDPPEHGTRRRMTISEFTVKRIKGMRPEVEEVVHGFLDEMLA------  139 (412)
T ss_dssp             TT-EECCTTSTTSCCCSGGGC----CCCCGGGCCTTHHHHHHTTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHH------
T ss_pred             cc-cccCcccccccccccccccccccccccccCCcHHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHh------
Confidence            54 444332   11 11    01  3456788899999999999999999999999999999999999999974      


Q ss_pred             CCcccchHHHHH-HHHHHHHHHHHhCCCccchhHHHHHHHHHHHHHHh-hh--cccccchhHHHHHHh-ccCCchhHHHH
Q 046539          188 ESFELDIWPHIQ-ALAADVISRTAFGSNYDDGRKIFELIREQSHLFIE-VS--QFDYIPGWREEALRI-GKASNDDLLGL  262 (484)
Q Consensus       188 ~~~~vdl~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~p~~~~~~~~~-~~~~~~~~l~~  262 (484)
                      .+..+|+..++. .+++++++. +||.+.++.+++......+...... ..  ....+-.+..+.++. .....+|+++.
T Consensus       140 ~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~  218 (412)
T 2zbx_A          140 AGPTADLVSQFALPVPSMVICR-LLGVPYADHEFFQDASKRLVQSTDAQSALTARNDLAGYLDGLITQFQTEPGAGLVGA  218 (412)
T ss_dssp             HCSCEEHHHHTTTHHHHHHHHH-HHTCCGGGHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHH
T ss_pred             cCCCccHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHH
Confidence            234799998886 588999997 7999876544444443333221000 00  000000000111111 11235689999


Q ss_pred             HHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChh
Q 046539          263 LMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKM  342 (484)
Q Consensus       263 ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~  342 (484)
                      +++...+     +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|+                 .|
T Consensus       219 ll~~~~~-----~~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~-----------------~~  276 (412)
T 2zbx_A          219 LVADQLA-----NGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADR-----------------SL  276 (412)
T ss_dssp             HHHTTTT-----TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG-----------------GG
T ss_pred             HHHhccc-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCh-----------------Hh
Confidence            9876432     3468999999999999999999999999999999999999999999873                 48


Q ss_pred             HHHHHHHhhcCCCCcc-cccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCc
Q 046539          343 VGKIIYEVFRIYSPAY-LIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVS  421 (484)
Q Consensus       343 l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~  421 (484)
                      ++|||+|+||++|+++ .++|.+.+|++++||.||||+.|.++.+++||||++| +||++|+||||-           ..
T Consensus       277 l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~  344 (412)
T 2zbx_A          277 VPGAVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVY-EDPDALDIHRSA-----------RH  344 (412)
T ss_dssp             HHHHHHHHHHHHCCCGGGCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSCC-----------TT
T ss_pred             HHHHHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEeChhhhcCCcccc-CCccccCCCCCC-----------CC
Confidence            9999999999999999 5899999999999999999999999999999999999 999999999971           46


Q ss_pred             ccccCCCCCCccchHHHHHHHHHHHHHHHHhc-EEEeCCC-cccCCCCcceeccCCCcceeee
Q 046539          422 FFPFGGGPRICIGQNFALMEVKLALAMILQNF-SFQLSPT-YVHAPSSGITVYPQHGAHMILN  482 (484)
Q Consensus       422 ~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~  482 (484)
                      ++|||.|+|.|+|++||++|++++++.|+++| +++++++ .......+.+.+....++|++.
T Consensus       345 ~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~g~~~lpv~~~  407 (412)
T 2zbx_A          345 HLAFGFGVHQCLGQNLARLELEVILNALMDRVPTLRLAVPVEQLVLRPGTTIQGVNELPVTWH  407 (412)
T ss_dssp             CCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGSCBCCTTSCCCBSCCEEECC
T ss_pred             ccCCCCCCCcCccHHHHHHHHHHHHHHHHHhcCcccccCCcccceeccccccCCcceeeeecc
Confidence            89999999999999999999999999999999 7998754 2333344555666677777653


No 45 
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00  E-value=5.1e-60  Score=456.31  Aligned_cols=359  Identities=16%  Similarity=0.190  Sum_probs=291.5

Q ss_pred             ccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCCcccCCCCCccccccccceeecCCcchhHHHhhhccC
Q 046539           76 PRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHDIFQKPKGNSLGKLVVNGMVTYEGEQWSKVRKIANPA  155 (484)
Q Consensus        76 ~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~R~~~~~~  155 (484)
                      .+|+.++.++++ |||||++.  . +.|+++||+++++++.+++.|++++......+.++++++.+|+.|+++|+++.+.
T Consensus        18 ~~p~~~~~~l~~-~Gpv~~~~--~-~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~   93 (398)
T 2xkr_A           18 REARAAYRWMRA-NQPVFRDR--N-GLAAASTYQAVIDAERQPELFSNAGGIRPDQPALPMMIDMDDPAHLLRRKLVNAG   93 (398)
T ss_dssp             TTHHHHHHHHHH-HCSEEECT--T-CCEEECSHHHHHHHHTCTTTEESTTCSSTTSCCCSSGGGCCTTHHHHHHHHHGGG
T ss_pred             cChhHHHHHHHh-cCCeeecC--C-CeEEEecHHHHHHHHhCcccccCccccCCcccccccccccCchHHHHHHHHhhhh
Confidence            478889999987 99998554  3 6999999999999998766677765432223356678889999999999999999


Q ss_pred             CChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHH-HHHHHHHHHHHHhCCCccchhHHHHHHHHHHHHHHh
Q 046539          156 FHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHI-QALAADVISRTAFGSNYDDGRKIFELIREQSHLFIE  234 (484)
Q Consensus       156 f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~  234 (484)
                      |++.+++.+.+.+.+.++++++.|.+       .+.+|+...+ ..+++++++.+ ||.+.++.+++......+..... 
T Consensus        94 fs~~~l~~~~~~i~~~~~~l~~~l~~-------~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~~~~~~~~~~~~~~~~-  164 (398)
T 2xkr_A           94 FTRKRVKDKEASIAALCDTLIDAVCE-------RGECDFVRDLAAPLPMAVIGDM-LGVRPEQRDMFLRWSDDLVTFLS-  164 (398)
T ss_dssp             SCHHHHHTTHHHHHHHHHHHHHTTTT-------TSEEEHHHHTTTHHHHHHHHHH-HTCCGGGHHHHHHHHHHHHHHHT-
T ss_pred             hCHHHHHHHHHHHHHHHHHHHHhhhh-------cCCccHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHhccC-
Confidence            99999999999999999999999863       2379998554 68999999998 99987655555444444332211 


Q ss_pred             hhcccccchhH--------------HHHHHh-ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHH
Q 046539          235 VSQFDYIPGWR--------------EEALRI-GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTA  299 (484)
Q Consensus       235 ~~~~~~~p~~~--------------~~~~~~-~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~  299 (484)
                         ..++|...              .+.++. .....+|+++.+++...+     +..++++++.+++..+++||+|||+
T Consensus       165 ---~~~~p~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~-----~~~ls~~ei~~~~~~l~~AG~eTt~  236 (398)
T 2xkr_A          165 ---SHVSQEDFQITMDAFAAYNDFTRATIAARRADPTDDLVSVLVSSEVD-----GERLSDDELVMETLLILIGGDETTR  236 (398)
T ss_dssp             ---SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBT-----TBCCCHHHHHHHHHHHHHHHSHHHH
T ss_pred             ---cccchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhcc-----CCCCCHHHHHHHHHHHHHHhhHHHH
Confidence               12233211              111111 112357899999876432     3469999999999999999999999


Q ss_pred             HHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCC
Q 046539          300 SLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGV  379 (484)
Q Consensus       300 ~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~  379 (484)
                      ++++|++++|++||++|+++++|+                 .|++|||+|+||++|+++.++|.+++|++++||.||||+
T Consensus       237 ~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt  299 (398)
T 2xkr_A          237 HTLSGGTEQLLRNRDQWDLLQRDP-----------------SLLPGAIEEMLRWTAPVKNMCRVLTADTEFHGTALCAGE  299 (398)
T ss_dssp             HHHHHHHHHHHHSHHHHHHHHHCG-----------------GGHHHHHHHHHHHHCSBCEEEEEESSCEEETTEEECTTC
T ss_pred             HHHHHHHHHHHHCHHHHHHHHhCH-----------------HHHHHHHHHHHhhcccccCcceEECCCeeECCEEECCCC
Confidence            999999999999999999999985                 389999999999999999999999999999999999999


Q ss_pred             eEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhc-EEEeC
Q 046539          380 LLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNF-SFQLS  458 (484)
Q Consensus       380 ~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~  458 (484)
                      .|.++.+++||||++| +||++|+||||.           ..++|||.|+|.|+|++||++|++++++.|+++| ++++.
T Consensus       300 ~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~  367 (398)
T 2xkr_A          300 KMMLLFESANFDEAVF-CEPEKFDVQRNP-----------NSHLAFGFGTHFCLGNQLARLELSLMTERVLRRLPDLRLV  367 (398)
T ss_dssp             EEEEEHHHHHTCTTTS-SSTTSCCTTCSS-----------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEES
T ss_pred             EEEeChhhhcCChhhC-CCCCeeCCCCCC-----------CCCCcCCCCCcCCcCHHHHHHHHHHHHHHHHHhCCCceEC
Confidence            9999999999999999 999999999974           2489999999999999999999999999999999 59987


Q ss_pred             CCcccCC-CCcceeccCCCcceeeecC
Q 046539          459 PTYVHAP-SSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       459 ~~~~~~~-~~~~~~~~~~~~~v~~~~~  484 (484)
                      ++..... ..+...+...+++|+++||
T Consensus       368 ~~~~~~~~~~~~~~~~~~~lpv~~~p~  394 (398)
T 2xkr_A          368 ADDSVLPLRPANFVSGLESMPVVFTPS  394 (398)
T ss_dssp             CTTCCCCBCCCSSBCCBSCCEEECCCC
T ss_pred             CCcceecccCcccccCccceeEEecCC
Confidence            5432210 3345567778899999876


No 46 
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00  E-value=3.7e-60  Score=457.88  Aligned_cols=363  Identities=14%  Similarity=0.184  Sum_probs=290.3

Q ss_pred             cccchHHHHHHHhCCceEEeeCC--cCeEEeCCHHHHHHHHhhCCcccCCCCCc-----ccccc---ccceeecCCcchh
Q 046539           77 RILPYHHHIISKYGKKSFKWMGP--RPSINVQDPKLIREILLKHDIFQKPKGNS-----LGKLV---VNGMVTYEGEQWS  146 (484)
Q Consensus        77 ~~~~~~~~~~~~yG~vf~~~~~~--~~~vvv~dp~~i~~vl~~~~~~~~~~~~~-----~~~~~---g~~~~~~~~~~~~  146 (484)
                      +|+.++.+++ +||||+++++++  .+.+++++|+++++++.++ .|++.+...     +..+.   +.++++.+++.|+
T Consensus        28 ~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~-~f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~  105 (411)
T 2dkk_A           28 EFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITNDP-RFGRAEVTQRQITRLAPHFKPRPGSLAFADQPDHN  105 (411)
T ss_dssp             CCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTCT-TEESGGGGGSCBCBSSSCCCCCTTCSTTCCTTHHH
T ss_pred             cccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcCC-CcccCCCCCCCccccccchhccccccccCCchHHH
Confidence            3448899887 899999999764  7899999999999999874 566554321     22232   5678889999999


Q ss_pred             HHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHHH-HHHHHHHHHHHhCCCccchhHHHHHH
Q 046539          147 KVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHIQ-ALAADVISRTAFGSNYDDGRKIFELI  225 (484)
Q Consensus       147 ~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~  225 (484)
                      ++|+++++.|++++++.+++.+.+.++++++.|.+.      +..+|+..++. .+++++++. +||.+.++.+++..+.
T Consensus       106 ~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~------g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~~~~~~~~  178 (411)
T 2dkk_A          106 RLRRAVAGAFTVGATKRLRPRAQEILDGLVDGILAE------GPPADLVERVLEPFPIAVVSE-VMGVPAADRERVHSWT  178 (411)
T ss_dssp             HHHHHHGGGSSHHHHHHHHHHHHHHHHHHHHHHHHH------CSCEEHHHHTTTHHHHHHHHH-HHTCCSSHHHHHHHHH
T ss_pred             HHHHHhhHhhCHHHHHHHHHHHHHHHHHHHHHHHhc------CCCeehHHHHHHHHHHHHHHH-HhCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999852      24699988775 699999998 6999876543333322


Q ss_pred             HHHHHHHHh---hh-cccccchhHHHHHHhc-cCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHH
Q 046539          226 REQSHLFIE---VS-QFDYIPGWREEALRIG-KASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTAS  300 (484)
Q Consensus       226 ~~~~~~~~~---~~-~~~~~p~~~~~~~~~~-~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~  300 (484)
                      ..+......   .. ....+-.+..+.++.. ....+|+++.|++. .+     +..++++++.+++..+++|| |||++
T Consensus       179 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~dll~~ll~~-~~-----~~~ls~~el~~~~~~l~~AG-eTta~  251 (411)
T 2dkk_A          179 RQIISTSGGAEAAERAKRGLYGWITETVRARAGSEGGDVYSMLGAA-VG-----RGEVGETEAVGLAGPLQIGG-EAVTH  251 (411)
T ss_dssp             GGGCSSCSCSHHHHHHHHHHHHHHHHHHHTTTTCCSSCHHHHHHHH-HH-----TTSSCTTSHHHHHHHHHHTH-HHHHH
T ss_pred             HHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHh-cC-----CCCCCHHHHHHHHHHHHHhh-HHHHH
Confidence            221110000   00 0000000001222222 22356899999876 21     34689999999999999999 99999


Q ss_pred             HHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcc-c-ccccccccceecCEEeCCC
Q 046539          301 LLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAY-L-IFRTNVEETKLGDFILPPG  378 (484)
Q Consensus       301 ~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~-~-~~R~~~~d~~i~g~~Ip~G  378 (484)
                      +++|++++|++||++|+++++|+                 .|+++||+|+||++|+++ . ++|.+++|++++||.||||
T Consensus       252 ~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~G  314 (411)
T 2dkk_A          252 NVGQMLYLLLTRRELMARMRERP-----------------GARGTALDELLRWISHRTSVGLARIALEDVEVHGTRIAAG  314 (411)
T ss_dssp             HHHHHHHHHHHSHHHHHHHHHCT-----------------TCCHHHHHHHHHHSCCBSSCCCCEEESSCEEETTEEECTT
T ss_pred             HHHHHHHHHHhCHHHHHHHHhCH-----------------HHHHHHHHHHHhhCCccccCccceEECCCEEECCEEECCC
Confidence            99999999999999999999983                 489999999999999999 7 8999999999999999999


Q ss_pred             CeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhc-EEEe
Q 046539          379 VLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNF-SFQL  457 (484)
Q Consensus       379 ~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~  457 (484)
                      +.|.++.+++||||++| +||++|+||||.           ..++|||.|+|.|+|++||++|++++++.|+++| ++++
T Consensus       315 t~V~~~~~~~~rdp~~f-~dp~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l  382 (411)
T 2dkk_A          315 EPVYVSYLAANRDPDVF-PDPDRIDLDRDP-----------NPHLAYGNGHHFCTGAVLARMQTELLVDTLLERLPGLRL  382 (411)
T ss_dssp             CEEEECHHHHTTCTTTS-SSTTSCCCSCSS-----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEE
T ss_pred             CEEEeChhhhcCChhhC-CCCCCCCCCCCC-----------CCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCCCcEE
Confidence            99999999999999999 999999999995           3589999999999999999999999999999999 8999


Q ss_pred             CCCc-ccCCCCcceeccCCCcceeeecC
Q 046539          458 SPTY-VHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       458 ~~~~-~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      .++. ......+.++++..+++|+++||
T Consensus       383 ~~~~~~~~~~~~~~~~~~~~lpv~~~~R  410 (411)
T 2dkk_A          383 AVPAEQVAWRRKTMIRGPRTLPCTWHHH  410 (411)
T ss_dssp             SSCGGGCCBCCSSSBCCBSCCEEECCCC
T ss_pred             CCCccccccccCcccCCcceeEEEeccC
Confidence            8652 22334456678888999999987


No 47 
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00  E-value=4e-60  Score=458.30  Aligned_cols=365  Identities=16%  Similarity=0.216  Sum_probs=291.4

Q ss_pred             ccccccchHHHHHHHhCCceEEee-CCcCeEEeCCHHHHHHHHhhCCcccCCCC---Cc----ccc---ccccceeecCC
Q 046539           74 IVPRILPYHHHIISKYGKKSFKWM-GPRPSINVQDPKLIREILLKHDIFQKPKG---NS----LGK---LVVNGMVTYEG  142 (484)
Q Consensus        74 ~~~~~~~~~~~~~~~yG~vf~~~~-~~~~~vvv~dp~~i~~vl~~~~~~~~~~~---~~----~~~---~~g~~~~~~~~  142 (484)
                      +..+|+..+.+| ++|||||++++ ++.+.|+++||+++++++.++. +++.+.   ..    +..   ..+.++++.+|
T Consensus        22 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g   99 (408)
T 3abb_A           22 CPYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDPR-LSSDWGHPDFPVVVRRTEDRGGLAFPLIGVDD   99 (408)
T ss_dssp             STTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCTT-EECCTTSTTCCCCC---------CCTTTTCCT
T ss_pred             cccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCCC-cccccccccccccccCCccccccccccccCCc
Confidence            335788899999 89999999998 7889999999999999998754 444332   11    111   12346778899


Q ss_pred             cchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHHH-HHHHHHHHHHHhCCCccchhHH
Q 046539          143 EQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHIQ-ALAADVISRTAFGSNYDDGRKI  221 (484)
Q Consensus       143 ~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~~-~~~~~~i~~~~fG~~~~~~~~~  221 (484)
                      +.|+++|+++.+.|++++++.+++.+.+.++++++.|.+      .+..+|+..++. .+++++++. +||.+.++.+.+
T Consensus       100 ~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~------~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~  172 (408)
T 3abb_A          100 PVHARQRRMLIPSFGVKRMNAIRPRLQSLVDRLLDDMLA------KGPGADLVSAFALPVPSVAICE-LLGVPYGDHDFF  172 (408)
T ss_dssp             THHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHH------TCSCEEHHHHTTTHHHHHHHHH-HHTCCGGGHHHH
T ss_pred             hHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHh------cCCCeehHHHHHHHHHHHHHHH-HhCCCHHHHHHH
Confidence            999999999999999999999999999999999999974      345799998876 588999997 799987654444


Q ss_pred             HHHHHHHHHHHHhhhcccccchh------HHHHHHh-ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcc
Q 046539          222 FELIREQSHLFIEVSQFDYIPGW------REEALRI-GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAG  294 (484)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~p~~------~~~~~~~-~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG  294 (484)
                      ......+......   .......      ..+.++. .....+|+++.+++...+     +..++++++.+++..+++||
T Consensus       173 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~-----~~~ls~~ei~~~~~~l~~AG  244 (408)
T 3abb_A          173 EECSRNFVGAATS---AEADAAFGELYTYLHGLVGRKQAEPEDGLLDELIARQLE-----EGDLDHDEVVMIALVLLVAG  244 (408)
T ss_dssp             HHHHHHHC---------CCSSHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHT-----SSSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcccch---HHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhcccC-----CCCCCHHHHHHHHHHHHHHH
Confidence            4443333221000   0010000      0111111 112356899999876421     34689999999999999999


Q ss_pred             cccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEE
Q 046539          295 QETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFI  374 (484)
Q Consensus       295 ~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~  374 (484)
                      +|||+++++|++++|++||++|+++++|+                 .|++|||+|+||++|+++.++|.+++|++++||.
T Consensus       245 ~dTt~~~l~~~l~~L~~~P~~~~~l~~e~-----------------~~l~a~i~E~lRl~p~~~~~~R~~~~d~~~~G~~  307 (408)
T 3abb_A          245 HETTVNAIALGALTLIQHPEQIDVLLRDP-----------------GAVSGVVEELLRFTSVSDHIVRMAKEDIEVGGAT  307 (408)
T ss_dssp             HHHHHHHHHHHHHHHHTCGGGGGGGGSCH-----------------HHHHHHHHHHHHHHCSSCEEEEEESSCEEETTEE
T ss_pred             HHHHHHHHHHHHHHHHhCHHHHHHHHhCH-----------------HhHHHHHHHHHHhcCcccccceEeCCCeEECCEE
Confidence            99999999999999999999999999874                 3799999999999999999899999999999999


Q ss_pred             eCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhc-
Q 046539          375 LPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNF-  453 (484)
Q Consensus       375 Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-  453 (484)
                      ||||+.|.++.+++||||++| +||++|+||||-           ..++|||.|+|.|+|++||++|++++++.|+++| 
T Consensus       308 Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~-----------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~  375 (408)
T 3abb_A          308 IKAGDAVLVSITLMNRDAKAY-ENPDIFDARRNA-----------RHHVGFGHGIHQCLGQNLARAELEIALGGLFARIP  375 (408)
T ss_dssp             ECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTSCC-----------TTCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHCT
T ss_pred             ECCCCEEEeChHHhcCCcccC-CCcccCCCCCCC-----------CCCCCCCCCCcCCcCHHHHHHHHHHHHHHHHHhCc
Confidence            999999999999999999999 999999999961           4689999999999999999999999999999999 


Q ss_pred             EEEeCCCc-ccCCCCcceeccCCCcceeeecC
Q 046539          454 SFQLSPTY-VHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       454 ~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      ++++.++. ......+.+.++..+++|++++|
T Consensus       376 ~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~~  407 (408)
T 3abb_A          376 GLRLAVPLDEVPIKAGHDAQGPIELPVVWHHH  407 (408)
T ss_dssp             TCEESSCGGGSCBCCTTSCCSBSCCEEECSCC
T ss_pred             cceecCCccccccccCcccCCcceeEEEeCCC
Confidence            79987432 22334456678889999999886


No 48 
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00  E-value=9.3e-60  Score=455.17  Aligned_cols=357  Identities=16%  Similarity=0.186  Sum_probs=293.0

Q ss_pred             ccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCCcccCCCCC-------c------c-cc---ccccc
Q 046539           74 IVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHDIFQKPKGN-------S------L-GK---LVVNG  136 (484)
Q Consensus        74 ~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~-------~------~-~~---~~g~~  136 (484)
                      +..+|+.++.++ ++|||||++++++.+.++++||+++++++.++ .|++++..       .      + ..   ..+.+
T Consensus        12 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (404)
T 1z8o_A           12 FHVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL-RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATN   89 (404)
T ss_dssp             GTSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT-TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSSS
T ss_pred             cccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC-Cccccccccccccccccccccccccchhhhcccc
Confidence            445788899999 99999999999989999999999999999876 56665432       1      1 11   14667


Q ss_pred             eeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHH-HHHHHHHHHHHHhCCCc
Q 046539          137 MVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHI-QALAADVISRTAFGSNY  215 (484)
Q Consensus       137 ~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~  215 (484)
                      +++.+|+.|+++|+++++.|++++++.+++.+.+.++++++.|.       .++.+|+..++ ..+++++++. +||.+.
T Consensus        90 l~~~~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~-------~~~~~d~~~~~~~~~~~~vi~~-~~G~~~  161 (404)
T 1z8o_A           90 MGTSDPPTHTRLRKLVSQEFTVRRVEAMRPRVEQITAELLDEVG-------DSGVVDIVDRFAHPLPIKVICE-LLGVDE  161 (404)
T ss_dssp             GGGCCTTHHHHHHHHHHTTSCHHHHHHTHHHHHHHHHHHHHTSC-------SSSEEEHHHHTTTHHHHHHHHH-HTTCCG
T ss_pred             cccCCCcHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhhh-------hcCCcchHHHHhHHHHHHHHHH-HhCCCH
Confidence            88889999999999999999999999999999999999999885       23479998766 6899999998 599987


Q ss_pred             cchhHHHHHHHHHHHHHHhhhcccccchhH-------------HHHHHh-ccCCchhHHHHHHHh-hhHhhHHhhcCCCH
Q 046539          216 DDGRKIFELIREQSHLFIEVSQFDYIPGWR-------------EEALRI-GKASNDDLLGLLMES-NYKEIQEKEAGMSI  280 (484)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-------------~~~~~~-~~~~~~~~l~~ll~~-~~~~~~~~~~~l~~  280 (484)
                      ++.+++......+.. ..       .|.+.             .+.++. .....+|+++.+++. ..+     +..+++
T Consensus       162 ~~~~~~~~~~~~~~~-~~-------~p~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~~-----~~~l~~  228 (404)
T 1z8o_A          162 KYRGEFGRWSSEILV-MD-------PERAEQRGQAAREVVNFILDLVERRRTEPGDDLLSALIRVQDDD-----DGRLSA  228 (404)
T ss_dssp             GGTTTHHHHHHHHHC-CC-------GGGHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCEETT-----TEECCH
T ss_pred             HHHHHHHHHHHHHhc-cC-------ChhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhhhccc-----CCCCCH
Confidence            655555444443322 10       01111             111111 112356899999876 321     235899


Q ss_pred             HHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccc
Q 046539          281 EEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLI  360 (484)
Q Consensus       281 ~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~  360 (484)
                      +++.+++..+++||+|||+++++|++++|++||++|+++++|+                 .|++|||+|+||++|+++.+
T Consensus       229 ~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~~~  291 (404)
T 1z8o_A          229 DELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDP-----------------SALPNAVEEILRYIAPPETT  291 (404)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG-----------------GGHHHHHHHHHHHTCSSCCE
T ss_pred             HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCH-----------------HhHHHHHHHHHHhcCCccCc
Confidence            9999999999999999999999999999999999999999983                 58999999999999999998


Q ss_pred             cccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHH
Q 046539          361 FRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALM  440 (484)
Q Consensus       361 ~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~  440 (484)
                      +|.+++|++++||.||||+.|.++.+++||||++| +||++|+||||.           ..++|||.|+|.|+|++||++
T Consensus       292 ~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~-~dP~~F~PeR~~-----------~~~~~FG~G~r~C~G~~lA~~  359 (404)
T 1z8o_A          292 TRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQF-PDPHRFDVTRDT-----------RGHLSFGQGIHFCMGRPLAKL  359 (404)
T ss_dssp             EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSCC-----------TTCCTTCSSTTCCTTHHHHHH
T ss_pred             ceEECCCEEECCEEECCCCEEEecchhhcCCcccC-CChhhcCCCCCC-----------CCccCCCCCCccCCcHHHHHH
Confidence            99999999999999999999999999999999999 999999999983           358999999999999999999


Q ss_pred             HHHHHHHHHHHhc-EEEeCCCc-ccCCCCcceeccCCCcceeee
Q 046539          441 EVKLALAMILQNF-SFQLSPTY-VHAPSSGITVYPQHGAHMILN  482 (484)
Q Consensus       441 ~~~~~l~~ll~~f-~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~  482 (484)
                      |++++++.|+++| +++++++. ......+.+.++..+++|++.
T Consensus       360 e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~v~~~  403 (404)
T 1z8o_A          360 EGEVALRALFGRFPALSLGIDADDVVWRRSLLLRGIDHLPVRLD  403 (404)
T ss_dssp             HHHHHHHHHHHHCTTCEESSCGGGCCCCCCSSSCCCSCCEEETT
T ss_pred             HHHHHHHHHHHhCCCcEecCCCCcceeccccccCCcceeEEEeC
Confidence            9999999999999 49987542 333345667788889999873


No 49 
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00  E-value=1.3e-60  Score=460.54  Aligned_cols=367  Identities=16%  Similarity=0.177  Sum_probs=291.0

Q ss_pred             CccccccchHHHHHHHh--CCceEEeeCCcCeEEeCCHHHHHHHHhhCCcccCCCCCcc--cc-ccccceeecCCcchhH
Q 046539           73 DIVPRILPYHHHIISKY--GKKSFKWMGPRPSINVQDPKLIREILLKHDIFQKPKGNSL--GK-LVVNGMVTYEGEQWSK  147 (484)
Q Consensus        73 ~~~~~~~~~~~~~~~~y--G~vf~~~~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~~--~~-~~g~~~~~~~~~~~~~  147 (484)
                      .+..+|+.++.+|+++|  ||||++++++ +.++++||+++++++.+.+.|++++....  .. ..+.+++..+|+.|++
T Consensus        16 ~~~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   94 (398)
T 4fb2_A           16 GPDGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQNTKAFSNKGVTFPRYETGEFELMMAGQDDPVHKK   94 (398)
T ss_dssp             CTTSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHTCCSSEEGGGCSSSCC----CCCTTTTCCTTHHHH
T ss_pred             hhhcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHhChhhccCCcccccCCCCcccccCcccCCchHHHH
Confidence            35568999999999999  9999999985 59999999999999966557776654331  11 1123467789999999


Q ss_pred             HHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHH-HHHHHHHHHHHHhCCCccchhHHHHHHH
Q 046539          148 VRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHI-QALAADVISRTAFGSNYDDGRKIFELIR  226 (484)
Q Consensus       148 ~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~  226 (484)
                      +|+++.+.|++++++.+.+.+.++++++++.|.+       ...+|+...+ ..+++++++. +||.+.++.+++..+..
T Consensus        95 ~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~-------~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~~~~  166 (398)
T 4fb2_A           95 YRQLVAKPFSPEATDLFTEQLRQSTNDLIDARIE-------LGEGDAATWLANEIPARLTAI-LLGLPPEDGDTYRRWVW  166 (398)
T ss_dssp             HHHHHHTTTCHHHHHTTHHHHHHHHHHHHHTTTT-------TTEEEHCCCCCTTHHHHHHHH-HTTSCGGGHHHHHHHHH
T ss_pred             HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhh-------cCCccHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHH
Confidence            9999999999999999999999999999998863       2357875555 6899999999 79988765555554444


Q ss_pred             HHHHHHHhhhcc---cccchhHHHHHH-hccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHH
Q 046539          227 EQSHLFIEVSQF---DYIPGWREEALR-IGKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLL  302 (484)
Q Consensus       227 ~~~~~~~~~~~~---~~~p~~~~~~~~-~~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l  302 (484)
                      .+..........   ..+-.+..+.++ ......+|+++.+++...+     +..++++++..++..+++||+|||++++
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~-----~~~l~~~~i~~~~~~l~~AG~~Tt~~~l  241 (398)
T 4fb2_A          167 AITHVENPEEGAEIFAELVAHARTLIAERRTNPGNDIMSRVIMSKID-----GESLSEDDLIGFFTILLLGGIDNTARFL  241 (398)
T ss_dssp             HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBT-----TBCCCHHHHHHHHHHCCCCCCHHHHHHH
T ss_pred             HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHcccC-----CCCCCHHHHHHHHHHHHHHhhHHHHHHH
Confidence            433210000000   000000011111 1123467899999986542     3469999999999999999999999999


Q ss_pred             HHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCCeEE
Q 046539          303 VWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLS  382 (484)
Q Consensus       303 ~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~  382 (484)
                      +|++++|++||++|+++++|+                 .|++|||+|+||++|+++ ++|.+++|++++||.||||+.|.
T Consensus       242 ~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~-~~R~~~~d~~l~g~~Ip~Gt~V~  303 (398)
T 4fb2_A          242 SSVFWRLAWDIELRRRLIAHP-----------------ELIPNAVDELLRFYGPAM-VGRLVTQEVTVGDITMKPGQTAM  303 (398)
T ss_dssp             HHHHHHHHHCHHHHHHHHHCG-----------------GGHHHHHHHHHHHHCCBC-EEEEECSCEEETTEEECTTCEEE
T ss_pred             HHHHHHHHhCHHHHHHHHhCH-----------------HHHHHHHHHHHHhCCCcC-CCeeeCCCEEECCEEECCCCEEE
Confidence            999999999999999999994                 478999999999999999 99999999999999999999999


Q ss_pred             echhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhc-EEEeCCCc
Q 046539          383 LPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNF-SFQLSPTY  461 (484)
Q Consensus       383 ~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~~~~  461 (484)
                      ++.+++||||++| +||++|+||||.           ..++|||.|+|.|+|++||++|++++++.|+++| +++++++.
T Consensus       304 ~~~~~~~rdp~~~-~dp~~F~PeR~~-----------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~  371 (398)
T 4fb2_A          304 LWFPIASRDRSAF-DSPDNIVIERTP-----------NRHLSLGHGIHRCLGAHLIRVEARVAITEFLKRIPEFSLDPNK  371 (398)
T ss_dssp             ECHHHHTTCTTTS-SSTTSCCTTCCS-----------CCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCCSCEECTTS
T ss_pred             echHhhcCChhhC-CCcCeeCCCCCC-----------CCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEECCCC
Confidence            9999999999999 999999999972           5689999999999999999999999999999999 99998764


Q ss_pred             ccCCCCcceeccCCCcceeeecC
Q 046539          462 VHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       462 ~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      ...... ...+....++|+++||
T Consensus       372 ~~~~~~-~~~~~~~~lpv~~~~~  393 (398)
T 4fb2_A          372 ECEWLM-GQVAGMLHVPIIFPKG  393 (398)
T ss_dssp             CCEEEC-SSBCEEEECEEECCCC
T ss_pred             Cceecc-ccccccceeEEEEcCC
Confidence            332222 3344445699999875


No 50 
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=5e-60  Score=457.66  Aligned_cols=368  Identities=20%  Similarity=0.277  Sum_probs=289.7

Q ss_pred             ccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCCcccCCCC---C---ccc---cc----cccceeecCC
Q 046539           76 PRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHDIFQKPKG---N---SLG---KL----VVNGMVTYEG  142 (484)
Q Consensus        76 ~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~---~---~~~---~~----~g~~~~~~~~  142 (484)
                      ++|+.++.++ ++|||||++++++.+.|+++||+++++++.++. +++++.   .   ...   .+    .+.++++.+|
T Consensus        15 ~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g   92 (408)
T 1odo_A           15 ADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD-VSKDARAHWPAFGEVVGTWPLALWVAVENMFTAYG   92 (408)
T ss_dssp             TTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT-EESCHHHHCTTHHHHTTTCTTTHHHHCCSGGGCCH
T ss_pred             CChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC-cccccccccccccccccccccccccccccccccCC
Confidence            4677889999 999999999998888999999999999998754 344321   1   010   11    3456888899


Q ss_pred             cchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHHH-HHHHHHHHHHHhCCCccchhHH
Q 046539          143 EQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHIQ-ALAADVISRTAFGSNYDDGRKI  221 (484)
Q Consensus       143 ~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~~-~~~~~~i~~~~fG~~~~~~~~~  221 (484)
                      +.|+++|+++.+.|++.+++.+++.+.+.++++++.|.+.  .  .+..+|+..++. .+++++++. +||.+.++.+++
T Consensus        93 ~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--~--~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~  167 (408)
T 1odo_A           93 PNHRKLRRLVAPAFSARRVDAMRPAVEAMVTGLVDRLAEL--P--AGEPVDLRQELAYPLPIAVIGH-LMGVPQDRRDGF  167 (408)
T ss_dssp             HHHHHHHHTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHS--C--TTSCEEHHHHTTTHHHHHHHHH-HHTCCHHHHHHH
T ss_pred             hHHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHhh--c--CCCCcchHHHHhhhhHHHHHHH-HhCCCHHHHHHH
Confidence            9999999999999999999999999999999999999753  1  245799998886 599999996 799876544444


Q ss_pred             HHHHHHHHHHHHhhhcccc------cchhHHHHHHh-ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcc
Q 046539          222 FELIREQSHLFIEVSQFDY------IPGWREEALRI-GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAG  294 (484)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~------~p~~~~~~~~~-~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG  294 (484)
                      ......+....  ......      +-.+..+.++. .....+|+++.+++...++  +.+..++++++.+++..+++||
T Consensus       168 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~~--~~~~~l~~~ei~~~~~~~~~AG  243 (408)
T 1odo_A          168 RALVDGVFDTT--LDQAEAQANTARLYEVLDQLIAAKRATPGDDMTSLLIAARDDE--GDGDRLSPEELRDTLLLMISAG  243 (408)
T ss_dssp             HHHHHHHHCTT--CCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHCC-------CCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhccc--CCHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHhcccc--cccCCCCHHHHHHHHHHHHHHh
Confidence            43333322200  000000      00000111111 1123568999998764321  0134689999999999999999


Q ss_pred             cccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCccc-ccccccccceec-C
Q 046539          295 QETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYL-IFRTNVEETKLG-D  372 (484)
Q Consensus       295 ~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~-g  372 (484)
                      +|||+++++|++++|++||++|+++++|                 .+|++|||+|+||++|+++. ++|.+++|++++ |
T Consensus       244 ~dTt~~~l~~~l~~L~~~P~~~~~l~~e-----------------~~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~~G  306 (408)
T 1odo_A          244 YETTVNVIDQAVHTLLTRPDQLALVRKG-----------------EVTWADVVEETLRHEPAVKHLPLRYAVTDIALPDG  306 (408)
T ss_dssp             HTTHHHHHHHHHHHHHHCHHHHHHHHHT-----------------SSCHHHHHHHHHHHSCSBSCEEEEEESSCEECTTS
T ss_pred             HHHHHHHHHHHHHHHHHCHHHHHHHHhC-----------------HHHHHHHHHHHHhhCCCccCCcceEeCCCeEcCCC
Confidence            9999999999999999999999999987                 35799999999999999996 899999999999 9


Q ss_pred             EEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHh
Q 046539          373 FILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQN  452 (484)
Q Consensus       373 ~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~  452 (484)
                      |.||||+.|.++.+++||||++| +||++|+||||          + ..++|||.|+|.|+|++||++|++++++.|+++
T Consensus       307 ~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~----------~-~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~  374 (408)
T 1odo_A          307 RTIARGEPILASYAAANRHPDWH-EDADTFDATRT----------V-KEHLAFGHGVHFCLGAPLARMEVTLALESLFGR  374 (408)
T ss_dssp             CEECTTCEEEECHHHHTTCTTTS-TTTTSCCTTCS----------C-CCCCTTCSSTTSCTTHHHHHHHHHHHHHHHHHH
T ss_pred             cEECCCCEEEeChhhhcCChhhc-CCccccCCCCC----------C-CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999 99999999994          1 469999999999999999999999999999999


Q ss_pred             c-EEEeCCC-cccCCCCcceeccCCCcceeeec
Q 046539          453 F-SFQLSPT-YVHAPSSGITVYPQHGAHMILNK  483 (484)
Q Consensus       453 f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~  483 (484)
                      | ++++..+ .......+.++++..+++|+++|
T Consensus       375 f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~  407 (408)
T 1odo_A          375 FPDLRLADPAEELPPVPSLISNGHQRLPVLLHA  407 (408)
T ss_dssp             CTTCEESCTTSCCCBCSCSSBCCBSCCEEECC-
T ss_pred             CCcceecCCccccccccCccccCcccceEEecC
Confidence            9 7998743 23334556778889999999986


No 51 
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00  E-value=4.2e-60  Score=456.76  Aligned_cols=355  Identities=18%  Similarity=0.220  Sum_probs=287.5

Q ss_pred             ccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCCcccCCCCCc----------cccccccceeecCCcch
Q 046539           76 PRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHDIFQKPKGNS----------LGKLVVNGMVTYEGEQW  145 (484)
Q Consensus        76 ~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~----------~~~~~g~~~~~~~~~~~  145 (484)
                      .+|+.++.++ ++||||++ +  +.+.++|+||+++++++.+ ..|++++...          +..+++.++++.+|+.|
T Consensus        13 ~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h   87 (397)
T 3buj_A           13 RDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGD-ERFARTGIRRFWTDLVGPGLLAEIVGDIILFQDEPDH   87 (397)
T ss_dssp             HCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTC-TTEESHHHHHHHHHHHCSSHHHHHHTTCGGGCCTTHH
T ss_pred             cCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcC-CCcccCcccccccccccccccccccccccccCCchhH
Confidence            3678888877 59999998 6  5789999999999999986 3455543211          11122667888899999


Q ss_pred             hHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHH-HHHHHHHHHHHHhCCCccchhHHHHH
Q 046539          146 SKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHI-QALAADVISRTAFGSNYDDGRKIFEL  224 (484)
Q Consensus       146 ~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~  224 (484)
                      +++|+++.+.|++++++.+++.+.+.++++++.|.+       ++++|+...+ ..+++++++.+ ||.+.++.+++...
T Consensus        88 ~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-------~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~~~~~~~~  159 (397)
T 3buj_A           88 GRLRGVVGPAFSPSALRRLEPVIAGTVDDLLRPALA-------RGAMDVVDELAYPLALRAVLGL-LGLPAADWGAVGRW  159 (397)
T ss_dssp             HHHHHHHGGGSSTTTTGGGHHHHHHHHHHHHHHHHT-------TTEEEHHHHTHHHHHHHHHHHH-HTCCGGGHHHHHHH
T ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhh-------cCCeehHHHHHHHhHHHHHHHH-hCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999872       3478987555 68999999998 99987655444444


Q ss_pred             HHHHHHHHHhhhcccccch--hH-------------HHHHHh-ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHH
Q 046539          225 IREQSHLFIEVSQFDYIPG--WR-------------EEALRI-GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECK  288 (484)
Q Consensus       225 ~~~~~~~~~~~~~~~~~p~--~~-------------~~~~~~-~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~  288 (484)
                      ...+...+..     .++.  +.             .+.++. .....+|+++.|++...+     +. ++++++.+++.
T Consensus       160 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~-----~~-ls~~ei~~~~~  228 (397)
T 3buj_A          160 SRDVGRTLDR-----GASAEDMRRGHAAIAEFADYVERALARRRREGGEDLLALMLDAHDR-----GL-MSRNEIVSTVV  228 (397)
T ss_dssp             HHHHHGGGCS-----SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSHHHHHHHHHHT-----TS-SCHHHHHHHHH
T ss_pred             HHHHHhhcCC-----CCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHhhhc-----CC-CCHHHHHHHHH
Confidence            4433322110     1111  10             111111 111356899999876421     22 89999999999


Q ss_pred             HHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccc
Q 046539          289 LFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEET  368 (484)
Q Consensus       289 ~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~  368 (484)
                      .+++||+|||+++++|++++|++||++|+++++|+                 .|++|||+|+||++|+++.++|.+++|+
T Consensus       229 ~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~~~~R~~~~d~  291 (397)
T 3buj_A          229 TFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRP-----------------DLLAQAVEECLRYDPSVQSNTRQLDVDV  291 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCG-----------------GGHHHHHHHHHHHSCSCCEEEEEESSCE
T ss_pred             HHHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCH-----------------HHHHHHHHHHHhhcCcccCcceEECCCE
Confidence            99999999999999999999999999999999983                 4899999999999999998899999999


Q ss_pred             eecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHH
Q 046539          369 KLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAM  448 (484)
Q Consensus       369 ~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~  448 (484)
                      +++||.||||+.|.++.+++||||++| +||++|+||||.           ..++|||.|+|.|+|++||++|++++++.
T Consensus       292 ~~~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~-----------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~  359 (397)
T 3buj_A          292 ELRGRRLRRDDVVVVLAGAANRDPRRY-DRPDDFDIERDP-----------VPSMSFGAGMRYCLGSYLARTQLRAAVAA  359 (397)
T ss_dssp             EETTEEECTTCEEEEEHHHHTTCTTTC-SSTTSCCTTSCC-----------CCCSTTCCGGGCCTTHHHHHHHHHHHHHH
T ss_pred             EECCEEECCCCEEEEChhhhCCCcccc-CCccccCCCCCC-----------CCCCCCCCCCccCCCHHHHHHHHHHHHHH
Confidence            999999999999999999999999999 999999999995           35799999999999999999999999999


Q ss_pred             HHHhc-EEEeCCC-cccCCCCcceeccCCCcceeeecC
Q 046539          449 ILQNF-SFQLSPT-YVHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       449 ll~~f-~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      | ++| ++++.++ .......+.++++..+++|+++||
T Consensus       360 l-~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r  396 (397)
T 3buj_A          360 L-ARLPGLRLGCASDALAYQPRTMFRGLASLPIAFTPG  396 (397)
T ss_dssp             H-HTSTTCEESSCSTTCCBCSCSSCCCBSCCEEECCTT
T ss_pred             H-hcCCCceeCCCCcccccccccccCCCcceeEEecCC
Confidence            9 999 8999865 232334456778889999999987


No 52 
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00  E-value=2e-59  Score=453.61  Aligned_cols=358  Identities=16%  Similarity=0.197  Sum_probs=289.9

Q ss_pred             ccccccchHHHHHHHhCCceEEee-CCcCeEEeCCHHHHHHHHhhCCcccCCCCC-c----ccc-ccccceeecCCcchh
Q 046539           74 IVPRILPYHHHIISKYGKKSFKWM-GPRPSINVQDPKLIREILLKHDIFQKPKGN-S----LGK-LVVNGMVTYEGEQWS  146 (484)
Q Consensus        74 ~~~~~~~~~~~~~~~yG~vf~~~~-~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~-~----~~~-~~g~~~~~~~~~~~~  146 (484)
                      +..+|+.++.++ ++||||+++++ ++.+.++++||+++++++.++. |++++.. .    +.. ..+.++++.+|+.|+
T Consensus        35 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~~-f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~  112 (417)
T 2y5n_A           35 HGLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDGR-FVRGPSMTRDEPRTRPEMVKGGLLSMDPPEHS  112 (417)
T ss_dssp             SSCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCTT-EESGGGGTSCCCBSSSSCCCCSGGGCCTTHHH
T ss_pred             hccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCCC-cccCccccccccccCcccccccCccCCchHHH
Confidence            445788999999 89999999997 7899999999999999998753 5554322 1    222 235678888999999


Q ss_pred             HHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHHH-HHHHHHHHHHHhCCCccchhHHHHHH
Q 046539          147 KVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHIQ-ALAADVISRTAFGSNYDDGRKIFELI  225 (484)
Q Consensus       147 ~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~  225 (484)
                      ++|+++.+.|++++++.+++.+.+.++++++.|.+.      +..+|+..++. .+++++++. +||.+.++.+++....
T Consensus       113 ~~R~~l~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~------~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~~~  185 (417)
T 2y5n_A          113 RLRRLVVKAFTARRAESLRPRAREIAHELVDQMAAT------GQPADLVAMFARQLPVRVICE-LLGVPSADHDRFTRWS  185 (417)
T ss_dssp             HHHHHHHHHSCHHHHHHTHHHHHHHHHHHHHHHHHH------CSSEEHHHHTTTTHHHHHHHH-HHTCCGGGHHHHHHHH
T ss_pred             HHHHHHhhhcCHHHHHHHHHHHHHHHHHHHHHHHhC------CCCeeHHHHHHHHhHHHHHHH-HcCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999741      12689987774 699999998 7999876544443333


Q ss_pred             HHHHHHHHhhhcccccchhH------------HHHHHh-ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHh
Q 046539          226 REQSHLFIEVSQFDYIPGWR------------EEALRI-GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYL  292 (484)
Q Consensus       226 ~~~~~~~~~~~~~~~~p~~~------------~~~~~~-~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~  292 (484)
                      ..+....       ..|...            .+.++. .....+|+++.+++...+     +..++++++.+++..+++
T Consensus       186 ~~~~~~~-------~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~dll~~ll~~~~~-----~~~ls~~ei~~~~~~l~~  253 (417)
T 2y5n_A          186 GAFLSTA-------EVTAEEMQEAAEQAYAYMGDLIDRRRKEPTDDLVSALVQARDQ-----QDSLSEQELLDLAIGLLV  253 (417)
T ss_dssp             HTTSTTC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBT-----TBCCCHHHHHHHHHHHHH
T ss_pred             HHHhccc-------CCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhhhcc-----CCCCCHHHHHHHHHHHHH
Confidence            2221110       011110            111111 112356899999876432     346899999999999999


Q ss_pred             cccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcc--ccccccccccee
Q 046539          293 AGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAY--LIFRTNVEETKL  370 (484)
Q Consensus       293 aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~--~~~R~~~~d~~i  370 (484)
                      ||+|||+++++|++++|++||++|+++++|+                 .|++|||+|+||++|+++  .++|.+++|+++
T Consensus       254 AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l  316 (417)
T 2y5n_A          254 AGYESTTTQIADFVYLLMTRPELRRQLLDRP-----------------ELIPSAVEELTRWVPLGVGTAFPRYAVEDVTL  316 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG-----------------GGHHHHHHHHHHHCCCBSSCCSCEEESSCEEE
T ss_pred             HhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH-----------------HHHHHHHHHHHHhcCCccccccceEeCCCEEE
Confidence            9999999999999999999999999999983                 589999999999999999  699999999999


Q ss_pred             cCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHH
Q 046539          371 GDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMIL  450 (484)
Q Consensus       371 ~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll  450 (484)
                      +||.||||+.|.++.+++||||++| +||++|+||||.           ..++|||.|+|.|+|++||++|++++++.|+
T Consensus       317 ~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll  384 (417)
T 2y5n_A          317 RGVTIRAGEPVLASTGAANRDQAQF-PDADRIDVDRTP-----------NQHLGFGHGVHHCLGAPLARVELQVALEVLL  384 (417)
T ss_dssp             TTEEECTTCEEEECHHHHTTCTTTS-TTTTSCCTTCSS-----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHH
T ss_pred             CCEEECCCCEEEeChhhhCCCcccC-CCccccCCCCCC-----------CCcCCCCCCCcCCcCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999 999999999982           4689999999999999999999999999999


Q ss_pred             Hhc-EEEeCCCc-ccCCCCcceeccCCCcceee
Q 046539          451 QNF-SFQLSPTY-VHAPSSGITVYPQHGAHMIL  481 (484)
Q Consensus       451 ~~f-~~~~~~~~-~~~~~~~~~~~~~~~~~v~~  481 (484)
                      ++| ++++.++. ..+...+.+.+....++|++
T Consensus       385 ~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  417 (417)
T 2y5n_A          385 QRLPGIRLGIPETQLRWSEGMLLRGPLELPVVW  417 (417)
T ss_dssp             HHCTTCEESSCGGGCCBCCCSSBCCBSCCEEEC
T ss_pred             HhCCCcEeCCCCccceeccCcccCCcceeEEeC
Confidence            999 59987642 33334456677778888874


No 53 
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00  E-value=8.5e-60  Score=466.67  Aligned_cols=396  Identities=14%  Similarity=0.143  Sum_probs=291.9

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHhhccCCCCCCCCccc-cccchHHHHHHHhCC-ceEEeeCCcCe-------EEeCCHHH
Q 046539           40 GFSGNSYKIFHGDTKDMSMMLKEAKARPISLSDDIVP-RILPYHHHIISKYGK-KSFKWMGPRPS-------INVQDPKL  110 (484)
Q Consensus        40 ~~Pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~yG~-vf~~~~~~~~~-------vvv~dp~~  110 (484)
                      .||||+++|++|++.++.+..             +.. +++.++.++++|||+ ||++++++.++       |++++.+.
T Consensus        10 ~iPGp~g~P~iG~~~~~~~~~-------------~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~   76 (473)
T 3dan_A           10 EIPGSYGIPFFQPIKDRLEYF-------------YGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKS   76 (473)
T ss_dssp             CCCCCCCSTTHHHHHHHHHHH-------------HSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTT
T ss_pred             CCCCCCCCcchhhHHHHHHHH-------------HhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccc
Confidence            799999999999999886421             123 678899999999999 99999975544       33344444


Q ss_pred             HHHHHhhC-----CcccCCCCCccccccc----cceeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHH
Q 046539          111 IREILLKH-----DIFQKPKGNSLGKLVV----NGMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFE  181 (484)
Q Consensus       111 i~~vl~~~-----~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~  181 (484)
                      .+.++...     ..+..... ....++|    .+++..+++.|+++|+++.+.|+++ ++.+++.+++.++++++.|.+
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~h~~~R~~~~~~f~~~-~~~~~~~i~~~~~~ll~~~~~  154 (473)
T 3dan_A           77 FPILFDVSKVEKKDLFTGTYM-PSTKLTGGYRVLSYLDPSEPRHAQLKNLLFFMLKNS-SNRVIPQFETTYTELFEGLEA  154 (473)
T ss_dssp             GGGGGCTTTEECSSCTTSSSC-CCGGGGTTSCCGGGCCTTSHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             cceecCCcceecccccccccc-CCccccCCCcceeeeCCCcHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence            33333211     11111111 1113344    3466789999999999999999994 899999999999999999986


Q ss_pred             HHhcCCCCcccchHHHHHHHHHHHHHHHHhCCCccch---hHHHHHHHHHHHHHHhhhcccccchhHHHHHHhcc-----
Q 046539          182 IAASDEESFELDIWPHIQALAADVISRTAFGSNYDDG---RKIFELIREQSHLFIEVSQFDYIPGWREEALRIGK-----  253 (484)
Q Consensus       182 ~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-----  253 (484)
                      ...   ++..+|+.+++..+++++++.++||.+....   +........+............+|.+.........     
T Consensus       155 ~~~---~~~~vdl~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp~~~~~~~~~~~~~~~~  231 (473)
T 3dan_A          155 ELA---KNGKAAFNDVGEQAAFRFLGRAYFNSNPEETKLGTSAPTLISSWVLFNLAPTLDLGLPWFLQEPLLHTFRLPAF  231 (473)
T ss_dssp             HHH---HHSCEECHHHHHHHHHHHHHHHHHSCCGGGSTTTTCHHHHHHHHHHHHHGGGCCCSCCHHHHHHHHSSSCCCGG
T ss_pred             Hhc---cCCcccHHHHHHHHHHHHHHHHHcCCCCCchhhhhhHHHHHHHHHHHhccchhhhcchHHHHHHHhhhccchHh
Confidence            433   2347999999999999999999999987652   11111122111110001111244544433222111     


Q ss_pred             ---CCc-------hhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHH-hcccccHHHHHHHHHHHHhc-ChHHHHHHHH
Q 046539          254 ---ASN-------DDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFY-LAGQETTASLLVWVLIMLCM-HPIWQERARQ  321 (484)
Q Consensus       254 ---~~~-------~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~-~aG~~tt~~~l~~~l~~L~~-~p~~~~~l~~  321 (484)
                         ...       .++++.+++...      +.+++++++..+++.++ ++|++||+++++|++++|++ ||++|+++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~ll~~~~------~~~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l~~L~~~~P~~~~~lr~  305 (473)
T 3dan_A          232 LIKSTYNKLYDYFQSVATPVMEQAE------KLGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAE  305 (473)
T ss_dssp             GTHHHHHHHHHHHHHHCHHHHHHHH------HHTCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             hhhhchhhhHHHHHHHHHHHHHhHh------hcCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence               011       233333444322      24799999999886666 78888899999999999999 7999999999


Q ss_pred             HHHHHhCC---CCCChhhhccChhHHHHHHHhhcCCCCccccccccccccee----cCEEeCCCCeEEechhhhhcCCCC
Q 046539          322 EVFQVLGN---KEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKL----GDFILPPGVLLSLPIILVHHDHEY  394 (484)
Q Consensus       322 Ei~~~~~~---~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i----~g~~Ip~G~~v~~~~~~~~~d~~~  394 (484)
                      |+++++++   ..++++++++|||++|||+|+||++|+++...|++++|+++    +||.||||+.|.++.+++||||++
T Consensus       306 Ei~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~~~~~g~~Ip~G~~v~~~~~~~~~dp~~  385 (473)
T 3dan_A          306 EIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKV  385 (473)
T ss_dssp             HHHHHHHHHSTTSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEEEEHHHHTTCTTT
T ss_pred             HHHHHhhcccCCCCCHHHHhcCchHHHHHHHHHhcCCCcccccccccCCcEeecCCCceEeCCCCEEEechHHhhCCchh
Confidence            99999765   68899999999999999999999999999977889999999    999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCcchhhhc----CCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcEEEeCCC
Q 046539          395 WGDDAKAFNPDRFSEGVSKAAK----NNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFSFQLSPT  460 (484)
Q Consensus       395 ~g~~p~~F~P~R~l~~~~~~~~----~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~~~~~~~  460 (484)
                      | +||++|+|+||++.......    +....+++||+|+|.|+|++||++|++++++.|+++|++...++
T Consensus       386 ~-~dp~~F~p~R~~~~~~~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~  454 (473)
T 3dan_A          386 F-DRPEEYVPDRFVGDGEALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYDSFEIEL  454 (473)
T ss_dssp             S-SSTTSCCTTTTSGGGGGGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred             c-CCcccCCccccCCCcccccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCeEEccC
Confidence            9 99999999999986221110    00123455555559999999999999999999999999765443


No 54 
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00  E-value=9.2e-60  Score=457.43  Aligned_cols=358  Identities=16%  Similarity=0.201  Sum_probs=286.9

Q ss_pred             cccchHHHHHHHhCCceEEeeC--CcCeEEeCCHHHHHHHHhhCCcccCCCC--------C-c-c-------ccccccce
Q 046539           77 RILPYHHHIISKYGKKSFKWMG--PRPSINVQDPKLIREILLKHDIFQKPKG--------N-S-L-------GKLVVNGM  137 (484)
Q Consensus        77 ~~~~~~~~~~~~yG~vf~~~~~--~~~~vvv~dp~~i~~vl~~~~~~~~~~~--------~-~-~-------~~~~g~~~  137 (484)
                      +|+.++.+++ +|||||++++|  +.+.++++||+++++++.++ .|++++.        . . .       ..+.+.++
T Consensus        21 ~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   98 (425)
T 2z3t_A           21 DPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR-RLGRNARVASGDTDTAPVPIPTEHRALRTVVENWL   98 (425)
T ss_dssp             CCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHHCT-TEESSCCCC---------------CHHHHHHTTCG
T ss_pred             ChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHcCC-Ccccccccccccccccccccccccccccccccccc
Confidence            6788999986 59999999987  77899999999999999876 6766542        1 1 1       11224678


Q ss_pred             eecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHH-HHHHHHHHHHHHhCCCcc
Q 046539          138 VTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHI-QALAADVISRTAFGSNYD  216 (484)
Q Consensus       138 ~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~  216 (484)
                      ++.+|+.|+++|+++.+.|++++++.+++.+.+.++++++.|.+      . +.+|+..++ ..+++++++.+ ||.+.+
T Consensus        99 ~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~------~-g~~dl~~~~~~~~~~~vi~~~-~G~~~~  170 (425)
T 2z3t_A           99 VFLDPPHHTELRSLLTTEFSPSIVTGLRPRIAELASALLDRLRA------Q-RRPDLVEGFAAPLPILVISAL-LGIPEE  170 (425)
T ss_dssp             GGCCHHHHHHHHHHHHGGGSHHHHHHHHHHHHHHHHHHHHHHTT------S-SSCBHHHHTTTHHHHHHHHHH-HTCCGG
T ss_pred             ccCCchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHh------c-CCccHHHHHHHHHHHHHHHHH-hCCCHH
Confidence            88899999999999999999999999999999999999999863      2 378998765 68999999997 999876


Q ss_pred             chhHHHHHHHHHHHHHHhhhcccccch--hH-------------HHHHHhc-cCCchhHHHHHHHhhhHhhHHhhcCCCH
Q 046539          217 DGRKIFELIREQSHLFIEVSQFDYIPG--WR-------------EEALRIG-KASNDDLLGLLMESNYKEIQEKEAGMSI  280 (484)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~-------------~~~~~~~-~~~~~~~l~~ll~~~~~~~~~~~~~l~~  280 (484)
                      +.+++......+...+..    ..++.  +.             .+.++.. ....+|+++.+++...+     +..+++
T Consensus       171 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~-----~~~ls~  241 (425)
T 2z3t_A          171 DHTWLRANAVALQEASTT----RARDGRGYARAEAASQEFTRYFRREVDRRGGDDRDDLLTLLVRARDT-----GSPLSV  241 (425)
T ss_dssp             GHHHHHHHHHHHHTTCTT----CCC---HHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHT-----TCCCCH
T ss_pred             HHHHHHHHHHHHHhhccc----cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhcc-----CCCCCH
Confidence            544444433333221110    01111  11             1111111 11346899998876422     346899


Q ss_pred             HHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccc
Q 046539          281 EEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLI  360 (484)
Q Consensus       281 ~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~  360 (484)
                      +++.+++..+++||+|||+++++|++++|++||++|+++++|+                 .|++|||+|+||++|+++.+
T Consensus       242 ~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~~~  304 (425)
T 2z3t_A          242 DGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTP-----------------ESTPAAVEELMRYDPPVQAV  304 (425)
T ss_dssp             HHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCG-----------------GGHHHHHHHHHHHSCSBCEE
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCh-----------------HhHHHHHHHHHHhCCcccCc
Confidence            9999999999999999999999999999999999999999984                 48999999999999999998


Q ss_pred             cccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHH
Q 046539          361 FRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALM  440 (484)
Q Consensus       361 ~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~  440 (484)
                      +|.+++|++++||.||||+.|.++.+++||||++| +||++|+||||.           ..++|||.|+|.|+|++||++
T Consensus       305 ~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~  372 (425)
T 2z3t_A          305 TRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARF-PDPDVLDVHRAA-----------ERQVGFGLGIHYCLGATLARA  372 (425)
T ss_dssp             EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTSCS-----------SCCCTTCCSTTCCTTHHHHHH
T ss_pred             ceEeCCCeeECCEEECCCCEEEeChhhhCCCcccc-CCcccCCCCCCC-----------CCCCCCCCCCccCCCHHHHHH
Confidence            99999999999999999999999999999999999 999999999995           358999999999999999999


Q ss_pred             HHHHHHHHHHHhc-EEEeCCCcccCCCCcceeccCCCcceeeec
Q 046539          441 EVKLALAMILQNF-SFQLSPTYVHAPSSGITVYPQHGAHMILNK  483 (484)
Q Consensus       441 ~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  483 (484)
                      |++++++.|+++| +++ +++.......+.+.++..+++|++++
T Consensus       373 e~~~~la~ll~~f~~~~-~~~~~~~~~~~~~~~~~~~lpv~~~~  415 (425)
T 2z3t_A          373 EAEIGLRALLDGIPALG-RGAHEVEYADDMVFHGPTRLLLDLPD  415 (425)
T ss_dssp             HHHHHHHHHHHHCGGGG-SSCEEEEECSCSSBCCEEEEEECCC-
T ss_pred             HHHHHHHHHHHhCCcCc-cCCCccccccccccCCcceeeEEecc
Confidence            9999999999999 899 76532233445667888889998876


No 55 
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00  E-value=1.1e-59  Score=456.71  Aligned_cols=362  Identities=16%  Similarity=0.227  Sum_probs=293.0

Q ss_pred             ccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCCcccCCCC-----Cc-c---ccc--c-ccceeecC
Q 046539           74 IVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHDIFQKPKG-----NS-L---GKL--V-VNGMVTYE  141 (484)
Q Consensus        74 ~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~-----~~-~---~~~--~-g~~~~~~~  141 (484)
                      +..+|+.++.++ ++|||||+ + ++.+.|+++||+++++++.+++ |++++.     .. .   ..+  + +.++++.+
T Consensus        24 ~~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   99 (419)
T 1q5d_A           24 YAEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER-FAVSREEWESSAEYSSAIPELSDMKKYGLFGLP   99 (419)
T ss_dssp             TTTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT-EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTSC
T ss_pred             hhhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC-ccccccccccccccccccchhhhhcccccccCC
Confidence            445788999999 78999998 5 7778999999999999998876 777651     11 1   122  1 56788889


Q ss_pred             CcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHH-HHHHHHHHHHHHhCCCccchhH
Q 046539          142 GEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHI-QALAADVISRTAFGSNYDDGRK  220 (484)
Q Consensus       142 ~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~  220 (484)
                      |+.|+++|+++.+.|++.+++.+++.+.+.++++++.|.+       .+.+|+...+ ..+++++++.+ ||.+.++.++
T Consensus       100 g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-------~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~~~  171 (419)
T 1q5d_A          100 PEDHARVRKLVNPSFTSRAIDLLRAEIQRTVDQLLDARSG-------QEEFDVVRDYAEGIPMRAISAL-LKVPAECDEK  171 (419)
T ss_dssp             HHHHHHHHHHHGGGGSHHHHGGGHHHHHHHHHHHHHHHTT-------SSCEETTTTTGGGSHHHHHHHH-TTCCGGGHHH
T ss_pred             chHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHH-hCCCHHHHHH
Confidence            9999999999999999999999999999999999999863       2368987654 78999999997 9998765555


Q ss_pred             HHHHHHHHHHHHHhhhccccc-chhH-------------HHHHHh-ccCCch-hHHHHHHHhhhHhhHHhhcCCCHHHHH
Q 046539          221 IFELIREQSHLFIEVSQFDYI-PGWR-------------EEALRI-GKASND-DLLGLLMESNYKEIQEKEAGMSIEEVI  284 (484)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~-p~~~-------------~~~~~~-~~~~~~-~~l~~ll~~~~~~~~~~~~~l~~~~i~  284 (484)
                      +......+........ ..+. +.+.             .+.+++ .....+ |+++.+++...     .+..++++++.
T Consensus       172 ~~~~~~~~~~~~~~~~-~P~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~dll~~ll~~~~-----~~~~l~~~ei~  245 (419)
T 1q5d_A          172 FRRFGSATARALGVGL-VPRVDEETKTLVASVTEGLALLHGVLDERRRNPLENDVLTMLLQAEA-----DGSRLSTKELV  245 (419)
T ss_dssp             HHHHHHHHHHHTTTTT-SSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCHHHHHHHHHH-----SSTTCCHHHHH
T ss_pred             HHHHHHHHHHhccccc-ccCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHhhhc-----cCCCCCHHHHH
Confidence            5554444433221100 0011 1111             111111 112345 89999987632     13468999999


Q ss_pred             HHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcc-ccccc
Q 046539          285 EECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAY-LIFRT  363 (484)
Q Consensus       285 ~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~-~~~R~  363 (484)
                      +++..+++||+|||+++++|++++|++||++|+++++|+                 +|++|||+|+||++|+++ .++|.
T Consensus       246 ~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~~~~~R~  308 (419)
T 1q5d_A          246 ALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEP-----------------GLMRNALDEVLRFDNILRIGTVRF  308 (419)
T ss_dssp             HHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG-----------------GGHHHHHHHHHHHSCSBSSEEEEE
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH-----------------HHHHHHHHHHHHhCCcccccccee
Confidence            999999999999999999999999999999999999982                 589999999999999999 69999


Q ss_pred             ccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHH
Q 046539          364 NVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVK  443 (484)
Q Consensus       364 ~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~  443 (484)
                      +.+|++++||.||||+.|.++.+++||||++| +||++|+||||-           ..++|||.|+|.|+|++||++|++
T Consensus       309 ~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~e~~  376 (419)
T 1q5d_A          309 ARQDLEYCGASIKKGEMVFLLIPSALRDGTVF-SRPDVFDVRRDT-----------SASLAYGRGPHVCPGVSLARLEAE  376 (419)
T ss_dssp             ESSCEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTSCC-----------TTCCTTCCGGGCCTTHHHHHHHHH
T ss_pred             eCCCeEECCEEECCCCEEEecHHHhcCChhhC-CChhhcCCCCCC-----------CCCCCCCCCCCcCccHHHHHHHHH
Confidence            99999999999999999999999999999999 999999999941           468999999999999999999999


Q ss_pred             HHHHHHHHhc-EEEeCCCcccCCCCcceeccCCCcceeeecC
Q 046539          444 LALAMILQNF-SFQLSPTYVHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       444 ~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      ++++.|+++| ++++.++...  ..+.+.++..+++|+++||
T Consensus       377 ~~la~ll~~f~~~~~~~~~~~--~~~~~~~~~~~l~v~~~~r  416 (419)
T 1q5d_A          377 IAVGTIFRRFPEMKLKETPVF--GYHPAFRNIESLNVILKPS  416 (419)
T ss_dssp             HHHHHHHHHCTTCEECSCCEE--CCCSSBCCEEECEEESSCC
T ss_pred             HHHHHHHHhCCCeEECCCccc--ccccccCCCceeEEEEecC
Confidence            9999999999 7999875322  3356677888999999987


No 56 
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00  E-value=1.1e-58  Score=448.25  Aligned_cols=366  Identities=16%  Similarity=0.229  Sum_probs=287.8

Q ss_pred             cccccchHHHHHHHhCCceEEee-CCcCeEEeCCHHHHHHHHhhCCcccCCCCCc-------ccccc-----ccc-eeec
Q 046539           75 VPRILPYHHHIISKYGKKSFKWM-GPRPSINVQDPKLIREILLKHDIFQKPKGNS-------LGKLV-----VNG-MVTY  140 (484)
Q Consensus        75 ~~~~~~~~~~~~~~yG~vf~~~~-~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~-------~~~~~-----g~~-~~~~  140 (484)
                      ..+|+.++.+++ +|||||++++ |+.+.|+++||+++++++.++ .|++++...       ...++     +.+ +++.
T Consensus        21 ~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   98 (413)
T 2z36_A           21 PFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG-RFSSDKRKDGFPLFTLDAATLQQLRSQPPLMLGM   98 (413)
T ss_dssp             TTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT-TEECCTTSTTCCCSSCCHHHHHHHTTSCCCGGGC
T ss_pred             ccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC-CcccCccccCcccccccccccccccccccccccc
Confidence            347888999997 8899999998 788999999999999999874 465543211       11232     667 8888


Q ss_pred             CCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHHH-HHHHHHHHHHHhCCCccchh
Q 046539          141 EGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHIQ-ALAADVISRTAFGSNYDDGR  219 (484)
Q Consensus       141 ~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~~-~~~~~~i~~~~fG~~~~~~~  219 (484)
                      +|+.|+++|+++.+.|++++++++.+.+.++++++++.|.+.     .++.+|+...+. .+++++++. +||.+.++.+
T Consensus        99 ~g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~-----~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~  172 (413)
T 2z36_A           99 DGAEHSAARRPVIGEFTVKRLAALRPRIQDIVDHFIDDMLAT-----DQRPVDLVQALSLPVPSLVICE-LLGVPYTDHD  172 (413)
T ss_dssp             CHHHHHHHHHHHHGGGSHHHHHHHHHHHHHHHHHHHHHHTTC-----SCSSEEHHHHTTTHHHHHHHHH-HHTCCGGGHH
T ss_pred             CchHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCccHHHHHhhhhHHHHHHH-HhCCCHHHHH
Confidence            999999999999999999999999999999999999998631     245799987665 689999998 5998776544


Q ss_pred             HHHHHHHHHHHHHHh--hh-cccccchhHHHHHHh-ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhccc
Q 046539          220 KIFELIREQSHLFIE--VS-QFDYIPGWREEALRI-GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQ  295 (484)
Q Consensus       220 ~~~~~~~~~~~~~~~--~~-~~~~~p~~~~~~~~~-~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~  295 (484)
                      ++......+......  .. ....+-.+..+.++. .....+|+++.+++...     .+..++++++.+++..+++||+
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~-----~~~~ls~~ei~~~~~~l~~AG~  247 (413)
T 2z36_A          173 FFQSRTTMMVSRTSMEDRRRAFAELRAYIDDLITRKESEPGDDLFSRQIARQR-----QEGTLDHAGLVSLAFLLLTAGH  247 (413)
T ss_dssp             HHHHHHHHTTCSSCHHHHHHHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHH-----HHSCCCHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhc-----CCCCCCHHHHHHHHHHHHhcch
Confidence            443333222110000  00 000000000111221 12235689999987632     2346999999999999999999


Q ss_pred             ccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcc-cccccccccceecCEE
Q 046539          296 ETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAY-LIFRTNVEETKLGDFI  374 (484)
Q Consensus       296 ~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~~  374 (484)
                      |||+++++|++++|++||++|+++++|+                 .|++|||+|+||++|+++ .++|.+++|++++||.
T Consensus       248 eTta~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~  310 (413)
T 2z36_A          248 ETTANMISLGVVGLLSHPEQLTVVKANP-----------------GRTPMAVEELLRYFTIADGVTSRLATEDVEIGGVS  310 (413)
T ss_dssp             HHHHHHHHHHHHHHHTCHHHHHHHHHCG-----------------GGHHHHHHHHHHHHCTTTTCEEEEECSCEEETTEE
T ss_pred             HHHHHHHHHHHHHHHhCHHHHHHHHhCh-----------------HHHHHHHHHHHHhCCCcccceeeeeCCCEEECCEE
Confidence            9999999999999999999999999983                 489999999999999999 6899999999999999


Q ss_pred             eCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhc-
Q 046539          375 LPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNF-  453 (484)
Q Consensus       375 Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-  453 (484)
                      ||||+.|.++.+++||||++| +||++|+||||.           ..++|||.|+|.|+|++||++|++++++.|+++| 
T Consensus       311 Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~  378 (413)
T 2z36_A          311 IKAGEGVIVSMLSANWDPAVF-KDPAVLDVERGA-----------RHHLAFGFGPHQCLGQNLARMELQIVFDTLFRRIP  378 (413)
T ss_dssp             ECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCCC-----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHST
T ss_pred             ECCCCEEEEChHhhcCChhhC-CCccccCCCCCC-----------CCCCCCCCCCccCccHHHHHHHHHHHHHHHHHhCC
Confidence            999999999999999999999 999999999983           3589999999999999999999999999999999 


Q ss_pred             EEEeCCCc-ccCCCCcceeccCCCcceeee
Q 046539          454 SFQLSPTY-VHAPSSGITVYPQHGAHMILN  482 (484)
Q Consensus       454 ~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~  482 (484)
                      ++++.++. ......+...+....++|++.
T Consensus       379 ~~~l~~~~~~~~~~~~~~~~g~~~lpv~~~  408 (413)
T 2z36_A          379 SLRLAVPMEDVPFKGDSVIYGVHELPVTWH  408 (413)
T ss_dssp             TCEESSCGGGSCBCTTSSSCCBSCCEEECC
T ss_pred             CccccCCcccceecccccccCcceeeEEee
Confidence            58987652 222344455566667888764


No 57 
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00  E-value=6.4e-59  Score=447.84  Aligned_cols=360  Identities=14%  Similarity=0.221  Sum_probs=286.9

Q ss_pred             ccccccchHHHHHHHhCCceEEee-CCcCeEEeCCHHHHHHHHhhCCcccCCCCCc--ccc-ccccc--eeecCC-----
Q 046539           74 IVPRILPYHHHIISKYGKKSFKWM-GPRPSINVQDPKLIREILLKHDIFQKPKGNS--LGK-LVVNG--MVTYEG-----  142 (484)
Q Consensus        74 ~~~~~~~~~~~~~~~yG~vf~~~~-~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~--~~~-~~g~~--~~~~~~-----  142 (484)
                      +..+|+.++.++ ++|||||++++ ++.+.|+++||+++++++.++. |++++...  +.. ..+.+  +++.+|     
T Consensus        24 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~~-f~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~  101 (404)
T 2xbk_A           24 KMLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDER-IGRTHPDPPSAAQYVRSPFLDLLISDADAESG  101 (404)
T ss_dssp             BTTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCTT-EESBCSSGGGSCCSSCCHHHHTTCBCSCHHHH
T ss_pred             cccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCCC-CCCCccccccCCcccccccccceeeCCCCCCC
Confidence            345788899999 89999999997 7899999999999999998753 65554332  222 23555  778899     


Q ss_pred             -cchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHH-HHHHHHHHHHHHhCCCccchhH
Q 046539          143 -EQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHI-QALAADVISRTAFGSNYDDGRK  220 (484)
Q Consensus       143 -~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~  220 (484)
                       +.|+++|+++.+.|++++++++.+.+.+.++++++.|.+      .+.++|+..++ ..+++++++. +||.+.++.++
T Consensus       102 ~~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~------~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~  174 (404)
T 2xbk_A          102 RRQHAETRRLLTPLFSARRVLEMQPKVEEAADTLLDAFIA------QGPPGDLHGELTVPFALTVLCE-VIGVPPQRRAE  174 (404)
T ss_dssp             HHHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHH------TCSSEEHHHHTHHHHHHHHHHH-HHTCCGGGHHH
T ss_pred             CchHHHHHHHhhhhcCHHHHHHHHHHHHHHHHHHHHHHHh------cCCCeeHHHHHHHHHHHHHHHH-HhCCCHHHHHH
Confidence             999999999999999999999999999999999999974      34479998766 4699999997 79998765444


Q ss_pred             HHHHHHHHHHHHHhhhc---ccccchhHHHHHHh-ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccc
Q 046539          221 IFELIREQSHLFIEVSQ---FDYIPGWREEALRI-GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQE  296 (484)
Q Consensus       221 ~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~-~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~  296 (484)
                      +......+.........   ...+-.+..+.++. .....+|+++.+ +    +    + .++++++.+++..+++||+|
T Consensus       175 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~l-~----~----~-~ls~~ei~~~~~~l~~AG~d  244 (404)
T 2xbk_A          175 LTTLLAGIAKLDDREGAVRAQDDLFGYVAGLVEHKRAEPGPDIISRL-N----D----G-ELTEDRVAHLAMGLLFAGLD  244 (404)
T ss_dssp             HHHHHHHHTBSSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHH-H----S----S-SCCHHHHHHHHHHHHHHTTH
T ss_pred             HHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHh-h----c----C-CCCHHHHHHHHHHHHHhchH
Confidence            44443332211000000   00000000111111 112345788777 1    1    2 68999999999999999999


Q ss_pred             cHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcc--cccccccccceecCEE
Q 046539          297 TTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAY--LIFRTNVEETKLGDFI  374 (484)
Q Consensus       297 tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~--~~~R~~~~d~~i~g~~  374 (484)
                      ||+++++|++++|++||++|+++++|+                 .|++|||+|+||++|+++  .++|.+++|++++||.
T Consensus       245 Tta~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~  307 (404)
T 2xbk_A          245 SVASIMDNGVVLLAAHPDQRAAALADP-----------------DVMARAVEEVLRTARAGGSVLPPRYASEDMEFGGVT  307 (404)
T ss_dssp             HHHHHHHHHHHHHHHCHHHHHHHHHCH-----------------HHHHHHHHHHHHHSCSSCCBCSCEEESSCEEETTEE
T ss_pred             HHHHHHHHHHHHHHhCHHHHHHHHhCH-----------------HHHHHHHHHHHHhCCCccccccceeECCCeeECCEE
Confidence            999999999999999999999999985                 379999999999999999  6999999999999999


Q ss_pred             eCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhc-
Q 046539          375 LPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNF-  453 (484)
Q Consensus       375 Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-  453 (484)
                      ||||+.|.++.+++||||++| +||++|+||||.           ..++|||.|+|.|+|++||++|++++++.|+++| 
T Consensus       308 Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~lpFG~G~r~C~G~~lA~~e~~~~la~ll~~f~  375 (404)
T 2xbk_A          308 IRAGDLVLFDLGLPNFDERAF-TGPEEFDAARTP-----------NPHLTFGHGIWHCIGAPLARLELRTMFTKLFTRLP  375 (404)
T ss_dssp             ECTTCEEECBTHHHHTCTTTS-SSTTSCCTTCSS-----------CCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHCT
T ss_pred             ECCCCEEEeChHHhcCChhhC-CCccccCCCCCC-----------CCCCCCCCCCcCCCcHHHHHHHHHHHHHHHHHhCC
Confidence            999999999999999999999 999999999983           4689999999999999999999999999999999 


Q ss_pred             EEEeCCCc-ccCCCCcceeccCCCcceee
Q 046539          454 SFQLSPTY-VHAPSSGITVYPQHGAHMIL  481 (484)
Q Consensus       454 ~~~~~~~~-~~~~~~~~~~~~~~~~~v~~  481 (484)
                      ++++.++. ......+.+.+...+++|++
T Consensus       376 ~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  404 (404)
T 2xbk_A          376 ELRPELPVEQLRLKEGQLSGGFAELRVVW  404 (404)
T ss_dssp             TCEESSCGGGCCBCSSBTTCCBSCCEEEC
T ss_pred             cceecCCCCcceeccCcccCCcceeeeeC
Confidence            69987642 23334556678888888874


No 58 
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00  E-value=1.2e-59  Score=458.15  Aligned_cols=353  Identities=16%  Similarity=0.171  Sum_probs=283.7

Q ss_pred             cccchHHHHHHHhCCceEEe--------eCCcCeEEeCCHHHHHHHHhhCCcccCCCCCccc-----------cccccce
Q 046539           77 RILPYHHHIISKYGKKSFKW--------MGPRPSINVQDPKLIREILLKHDIFQKPKGNSLG-----------KLVVNGM  137 (484)
Q Consensus        77 ~~~~~~~~~~~~yG~vf~~~--------~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~~~-----------~~~g~~~  137 (484)
                      +|+.++.++ ++||||+++.        +|+.+.++|+|+++++++++++..|++.+.....           ...+.++
T Consensus        38 ~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~l  116 (433)
T 3ivy_A           38 LPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHSDVFSSYENGVIPRFKNDIAREDIEVQRFVM  116 (433)
T ss_dssp             CCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCTTTEESTTTCSCCCCCTTCCHHHHHGGGGSG
T ss_pred             CccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcChhhccCCcccccccccccccccccccccCCc
Confidence            588899999 7899999998        4557899999999999999876667766543321           1335678


Q ss_pred             eecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHH-HHHHHHHHHHHHhCCCcc
Q 046539          138 VTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHI-QALAADVISRTAFGSNYD  216 (484)
Q Consensus       138 ~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~  216 (484)
                      +..+|+.|+++|+++++.|+++.++.+.+.+.+.++++++.|.+       ++.+|+..++ ..+++++++.+ ||.+.+
T Consensus       117 ~~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-------~~~~d~~~~~~~~~~~~vi~~l-~G~~~~  188 (433)
T 3ivy_A          117 LNMDAPHHTRLRKIISRGFTPRAVGRLHDELQERAQKIAAEAAA-------AGSGDFVEQVSCELPLQAIAGL-LGVPQE  188 (433)
T ss_dssp             GGCCTTHHHHHHHHHGGGSCHHHHHTTHHHHHHHHHHHHHHHHH-------HCEEEHHHHTTSHHHHHHHHHH-HTCCHH
T ss_pred             cccChHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhh-------CCCeeHHHHHHHHHHHHHHHHH-cCCCHH
Confidence            88999999999999999999999999999999999999999974       2368999998 99999999995 997644


Q ss_pred             chhHHHHHHHHHHHHHHhhhcccccchh-----H----------HHHHHhc-cCCchhHHHHHHHhhhHhhHHhhcCCCH
Q 046539          217 DGRKIFELIREQSHLFIEVSQFDYIPGW-----R----------EEALRIG-KASNDDLLGLLMESNYKEIQEKEAGMSI  280 (484)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~-----~----------~~~~~~~-~~~~~~~l~~ll~~~~~~~~~~~~~l~~  280 (484)
                      +.+++......+..        ...|.+     .          .+.++.. ....+|+++.|++...+     +.++++
T Consensus       189 ~~~~~~~~~~~~~~--------~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~-----~~~ls~  255 (433)
T 3ivy_A          189 DRGKLFHWSNEMTG--------NEDPEYAHIDPKASSAELIGYAMKMAEEKAKNPADDIVTQLIQADID-----GEKLSD  255 (433)
T ss_dssp             HHHHHHHHHTTCSC--------CCCGGGTTCCHHHHHHHHHHHHHHHHHHC-------CHHHHHSCC-------CCCCCH
T ss_pred             HHHHHHHHHHHHhc--------cCCchhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHhhhcC-----CCCCCH
Confidence            33333322222111        111111     0          1222222 22456899999876432     346999


Q ss_pred             HHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccc
Q 046539          281 EEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLI  360 (484)
Q Consensus       281 ~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~  360 (484)
                      +++.+++..+++||+|||+++++|++++|++||++|+++++|++                   ++||+|+||++|+++.+
T Consensus       256 ~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~-------------------~a~i~E~LRl~p~~~~~  316 (433)
T 3ivy_A          256 DEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRP-------------------ETAADEIVRWATPVTAF  316 (433)
T ss_dssp             HHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHHCC-------------------TTHHHHHHHHHCSBCEE
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCcc-------------------cchhHHHhhhCcchhce
Confidence            99999999999999999999999999999999999999999952                   78999999999999998


Q ss_pred             cccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccC-CCCCCccchHHHH
Q 046539          361 FRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFG-GGPRICIGQNFAL  439 (484)
Q Consensus       361 ~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg-~G~r~C~G~~la~  439 (484)
                      +|.+++|++++||.||||+.|.++.+++||||++| +||++|+|+||.           ..++||| .|+|.|+|++||+
T Consensus       317 ~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~f-~dp~~F~p~R~~-----------~~~l~FGg~G~r~C~G~~lA~  384 (433)
T 3ivy_A          317 QRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVF-QDPFTFNILRNP-----------NPHVGFGGTGAHYCIGANLAR  384 (433)
T ss_dssp             EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTCCS-----------CCCCTTCSSSTTCCTTHHHHH
T ss_pred             eeEECCCEEECCEEECCCCEEEEChhhhcCCchhC-CCcCccCCCCCC-----------CCCCCCCCCCCccCCCHHHHH
Confidence            99999999999999999999999999999999999 999999999983           4689999 9999999999999


Q ss_pred             HHHHHHHHHHHHhcE-EEeCCCcccCCCCcceeccCCCcceeeecC
Q 046539          440 MEVKLALAMILQNFS-FQLSPTYVHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       440 ~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      +|++++++.|+++|+ ++++++...  ..+...+....++|++++|
T Consensus       385 ~e~~~~l~~ll~~f~~~~l~~~~~~--~~~~~~~g~~~lpv~~~~R  428 (433)
T 3ivy_A          385 MTINLIFNAVADHMPDLKPISAPER--LRSGWLNGIKHWQVDYTGR  428 (433)
T ss_dssp             HHHHHHHHHHHHHCTTCEESSCCEE--CCCSSBCCEEECEEESCC-
T ss_pred             HHHHHHHHHHHHhCCccEECCCCce--eccCcccCcceeEEEEecc
Confidence            999999999999999 999865332  2233345455789999886


No 59 
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00  E-value=1.5e-59  Score=453.86  Aligned_cols=356  Identities=18%  Similarity=0.238  Sum_probs=290.0

Q ss_pred             ccccchHHHHHHHhCCceEEeeCC--cCeEEeCCHHHHHHHHhhCCcccCCCCCcccc----c--c-ccceeecCCcchh
Q 046539           76 PRILPYHHHIISKYGKKSFKWMGP--RPSINVQDPKLIREILLKHDIFQKPKGNSLGK----L--V-VNGMVTYEGEQWS  146 (484)
Q Consensus        76 ~~~~~~~~~~~~~yG~vf~~~~~~--~~~vvv~dp~~i~~vl~~~~~~~~~~~~~~~~----~--~-g~~~~~~~~~~~~  146 (484)
                      ++|+.++.++++ ||||+++...+  .+.++|++++++++++++++.|++.+......    .  . +.+++..+|+.|+
T Consensus        37 ~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~  115 (415)
T 3mgx_A           37 LERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPSAPLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQHR  115 (415)
T ss_dssp             TTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTTSSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHHHH
T ss_pred             CChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhChhhhcCCccccccccccccccccCCCccccCcHHHH
Confidence            478889999987 99999987444  78999999999999997766677665432211    1  2 4568889999999


Q ss_pred             HHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHH-HHHHHHHHHHHHhCCCccchhHHHHHH
Q 046539          147 KVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHI-QALAADVISRTAFGSNYDDGRKIFELI  225 (484)
Q Consensus       147 ~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~  225 (484)
                      ++|+++.+.|+++.++++.+.+.+.++++++.|.+       .+.+|+..++ ..+++++++. +||.+.++.+++..+.
T Consensus       116 ~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-------~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~~~~~~~~  187 (415)
T 3mgx_A          116 KLRKLVGPLLSRAAARKLAERVRIEVGDVLGRVLD-------GEVCDAATAIGPRIPAAVVCE-ILGVPAEDEDMLIDLT  187 (415)
T ss_dssp             HHHHHHGGGSSHHHHHHSHHHHHHHHHHHTTTSSS-------SSCEESTTTTTTHHHHHHHHH-HHTCCGGGHHHHHHHH
T ss_pred             HHHHHhHhhhCHHHHHHHHHHHHHHHHHHHHHHHh-------cCCcchHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999998752       2368998887 6799999998 6898765544544444


Q ss_pred             HHHHHHHHhhhcccccc--hhH---------HHHHH-hccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhc
Q 046539          226 REQSHLFIEVSQFDYIP--GWR---------EEALR-IGKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLA  293 (484)
Q Consensus       226 ~~~~~~~~~~~~~~~~p--~~~---------~~~~~-~~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~a  293 (484)
                      ..+.....    ..+.|  .+.         .+.++ ......+|+++.+++..         .++++++.+++..+++|
T Consensus       188 ~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~~~dll~~ll~~~---------~ls~~el~~~~~~ll~A  254 (415)
T 3mgx_A          188 NHAFGGED----ELFDGMTPRQAHTEILVYFDELITARRKEPGDDLVSTLVTDD---------DLTIDDVLLNCDNVLIG  254 (415)
T ss_dssp             HHHTSCCC--------CCCHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCT---------TSCHHHHHHHHHHHHHH
T ss_pred             HHHHcccC----cccchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhCC---------CCCHHHHHHHHHHHHHh
Confidence            44322111    01111  111         11111 11224678999988653         48999999999999999


Q ss_pred             ccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCE
Q 046539          294 GQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDF  373 (484)
Q Consensus       294 G~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~  373 (484)
                      |+|||+++++|++++|++||++|+++++|                 .||++|||+|+||++|+++.++|.+++|++++||
T Consensus       255 G~eTTa~~l~~~l~~L~~~P~~~~~l~~E-----------------~~~l~a~i~E~LRl~pp~~~~~R~~~~d~~l~G~  317 (415)
T 3mgx_A          255 GNETTRHAITGAVHALATVPGLLTALRDG-----------------SADVDTVVEEVLRWTSPAMHVLRVTTADVTINGR  317 (415)
T ss_dssp             HHTTHHHHHHHHHHHHHHSTTHHHHHHHT-----------------SSCHHHHHHHHHHHHCCBCEEEEEESSCEEETTE
T ss_pred             hhHHHHHHHHHHHHHHHHCHHHHHHHHhC-----------------hHhHHHHHHHHHHhcCcccccceecCCCeeECCE
Confidence            99999999999999999999999999998                 3899999999999999999999999999999999


Q ss_pred             EeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhc
Q 046539          374 ILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNF  453 (484)
Q Consensus       374 ~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f  453 (484)
                      .||||+.|+++.+++||||++| +||++|+|+||.           ..++|||.|+|.|+|++||++|++++++.|+++|
T Consensus       318 ~Ip~G~~V~~~~~a~~rDp~~~-~dP~~F~P~R~~-----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f  385 (415)
T 3mgx_A          318 DLPSGTPVVAWLPAANRDPAEF-DDPDTFLPGRKP-----------NRHITFGHGMHHCLGSALARIELSVVLRVLAERV  385 (415)
T ss_dssp             EECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTCCS-----------CCCCTTCCGGGCCTTHHHHHHHHHHHHHHHHHHE
T ss_pred             EECCCCEEEechHHhCCChhhc-CCccccCCCCCC-----------CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999 999999999972           4689999999999999999999999999999999


Q ss_pred             -EEEeCCCcccCCCCcceeccCCCcceeeecC
Q 046539          454 -SFQLSPTYVHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       454 -~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                       +++++++...  ..+...+....++|++++|
T Consensus       386 ~~~~l~~~~~~--~~~~~~~~~~~lpv~~~~R  415 (415)
T 3mgx_A          386 SRVDLEREPAW--LRAIVVQGYRELPVRFTGR  415 (415)
T ss_dssp             EEEEECSCCEE--CSCSSBCCEEECEEEEEEC
T ss_pred             CCCccCCCccc--ccCCcccCceeeeEEEecC
Confidence             8998754322  3344556667899999987


No 60 
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00  E-value=1.3e-58  Score=450.43  Aligned_cols=361  Identities=16%  Similarity=0.169  Sum_probs=293.2

Q ss_pred             cccchHHHHHHHhCCceEEeeC-------CcCeEEeCCHHHHHHHHhhCCcccCCCCC--c--cccc--cccceeecCCc
Q 046539           77 RILPYHHHIISKYGKKSFKWMG-------PRPSINVQDPKLIREILLKHDIFQKPKGN--S--LGKL--VVNGMVTYEGE  143 (484)
Q Consensus        77 ~~~~~~~~~~~~yG~vf~~~~~-------~~~~vvv~dp~~i~~vl~~~~~~~~~~~~--~--~~~~--~g~~~~~~~~~  143 (484)
                      +|+.++.+++ +|||||+++++       +.+.|+++||+++++++.+++.|++++..  .  ...+  .+.++++.+|+
T Consensus        45 ~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~l~~~dg~  123 (435)
T 2wm5_A           45 VRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHPDIFSSYPNITINDQTPELAEYFGSMIVLDDP  123 (435)
T ss_dssp             HHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCTTTEECSSCCSSSCCCHHHHHHHHGGGGCCTT
T ss_pred             ChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCcccccCccccccCccccchhhhccccccCCcH
Confidence            6778999995 79999999986       66899999999999999886667776531  1  1222  26678888999


Q ss_pred             chhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHH-HHHHHHHHHHHHhCCCccchhHHH
Q 046539          144 QWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHI-QALAADVISRTAFGSNYDDGRKIF  222 (484)
Q Consensus       144 ~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~  222 (484)
                      .|+++|+++.+.|++++++.+++.+.+.++++++.|.+..    ++..+|+..++ ..+++++++.+ ||.+.++.+++.
T Consensus       124 ~h~~~R~~l~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~----~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~~~~~~  198 (435)
T 2wm5_A          124 RHQRLRSIVSRAFTPKVVARIEAAVRDRAHRLVSSMIANN----PDRQADLVSELAGPLPLQIICDM-MGIPKADHQRIF  198 (435)
T ss_dssp             HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHC----TTSEEEHHHHTTTHHHHHHHHHH-HTCCGGGHHHHH
T ss_pred             HHHHHHHHhHHhhCHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCcEehHHHHHHHHHHHHHHHH-cCCCHHHHHHHH
Confidence            9999999999999999999999999999999999998631    23479998776 78999999998 999876655554


Q ss_pred             HHHHHHHHHHHhhhcccccchhH-------------HHHHHh-ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHH
Q 046539          223 ELIREQSHLFIEVSQFDYIPGWR-------------EEALRI-GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECK  288 (484)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~p~~~-------------~~~~~~-~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~  288 (484)
                      .....+.....    ..+.+.+.             .+.+++ .....+|+++.|++...+     +..++++++..++.
T Consensus       199 ~~~~~~~~~~~----p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~-----~~~ls~~ei~~~~~  269 (435)
T 2wm5_A          199 HWTNVILGFGD----PDLATDFDEFMQVSADIGAYATALAEDRRVNHHDDLTSSLVEAEVD-----GERLSSREIASFFI  269 (435)
T ss_dssp             HHHHHHHHTTC----TTSCCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHCCBT-----TBCCCHHHHHHHHH
T ss_pred             HHHHHHhccCC----cchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHhhhcc-----CCCCCHHHHHHHHH
Confidence            44444332211    11112211             111111 112357899999876432     34689999999999


Q ss_pred             HHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccc
Q 046539          289 LFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEET  368 (484)
Q Consensus       289 ~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~  368 (484)
                      .+++||+|||+++++|++++|++||++|+++++|++                +|++|||+|+||++|+++.++|.+++|+
T Consensus       270 ~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~----------------~~l~a~i~E~lRl~p~~~~~~R~~~~d~  333 (435)
T 2wm5_A          270 LLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFD----------------GLAPTAVEEIVRWASPVVYMRRTLTQDI  333 (435)
T ss_dssp             HHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHH----------------HHHHHHHHHHHHHHCSBCCEEEEESSCE
T ss_pred             HHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChH----------------hHHHHHHHHHHhhcCcccCcceEeCCCe
Confidence            999999999999999999999999999999999964                3899999999999999999899999999


Q ss_pred             eecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCC-CCCCccchHHHHHHHHHHHH
Q 046539          369 KLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGG-GPRICIGQNFALMEVKLALA  447 (484)
Q Consensus       369 ~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~-G~r~C~G~~la~~~~~~~l~  447 (484)
                      +++||.||||+.|.++.+++||||++| +||++|+||||  +         ..++|||. |+|.|+|++||++|++++++
T Consensus       334 ~l~G~~Ip~Gt~V~~~~~~~~rdp~~f-~dP~~F~PeR~--~---------~~~lpFG~~G~r~C~G~~lA~~e~~~~la  401 (435)
T 2wm5_A          334 ELRGTKMAAGDKVSLWYCSANRDESKF-ADPWTFDLARN--P---------NPHLGFGGGGAHFCLGANLARREIRVAFD  401 (435)
T ss_dssp             EETTEEECTTCEEEECHHHHTTCTTTS-SSTTCCCTTCC--S---------CCCCTTCSSSTTCCTTHHHHHHHHHHHHH
T ss_pred             eECCEEECCCCEEEeCHHHhcCCcccC-cCCCccCCCCC--C---------CCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence            999999999999999999999999999 99999999993  1         46899999 99999999999999999999


Q ss_pred             HHHHhcE-EEeCCCcccCCCCcceeccCCCcceeee
Q 046539          448 MILQNFS-FQLSPTYVHAPSSGITVYPQHGAHMILN  482 (484)
Q Consensus       448 ~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~  482 (484)
                      .|+++|+ +++.+...  ...+...+....++|+++
T Consensus       402 ~ll~~f~~~~l~~~~~--~~~~~~~~~~~~lpv~~~  435 (435)
T 2wm5_A          402 ELRRQMPDVVATEEPA--RLLSQFIHGIKTLPVTWS  435 (435)
T ss_dssp             HHHHHCTTCEECSCCE--ECCCSSBCCEEECEEECC
T ss_pred             HHHHhCCccEECCCcc--ccccccccCccceeEEeC
Confidence            9999997 99876432  233455666677888763


No 61 
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00  E-value=3.6e-59  Score=449.58  Aligned_cols=357  Identities=17%  Similarity=0.165  Sum_probs=286.3

Q ss_pred             ccccccchHHHHHHHhCCceEEee-CCcCeEEeCCHHHHHHHHhhCCccc-C-CCCC--c-c-----ccccccceeecCC
Q 046539           74 IVPRILPYHHHIISKYGKKSFKWM-GPRPSINVQDPKLIREILLKHDIFQ-K-PKGN--S-L-----GKLVVNGMVTYEG  142 (484)
Q Consensus        74 ~~~~~~~~~~~~~~~yG~vf~~~~-~~~~~vvv~dp~~i~~vl~~~~~~~-~-~~~~--~-~-----~~~~g~~~~~~~~  142 (484)
                      +..+|+.++.+| ++|||||++++ ++.+.|+++||+++++++.++. |+ + ++..  . .     ....+.++++.  
T Consensus        14 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--   89 (396)
T 1n40_A           14 RGDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDRR-FSMKETAAAGAPRLNALTVPPEVVNNMGNI--   89 (396)
T ss_dssp             CSSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCTT-EESGGGGSTTCCCSSCCSSCGGGGGHHHHH--
T ss_pred             cccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCCC-cccccCccccccccccccCCchhhhhhhhH--
Confidence            345788999999 99999999998 7889999999999999998754 55 4 3221  1 1     12235556655  


Q ss_pred             cchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHHH-HHHHHHHHHHHhCCCccchhHH
Q 046539          143 EQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHIQ-ALAADVISRTAFGSNYDDGRKI  221 (484)
Q Consensus       143 ~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~~-~~~~~~i~~~~fG~~~~~~~~~  221 (484)
                       .|+++|+++.+.|++. ++.+.+.+.+.++++++.|.+.      ++.+|+..++. .+++++++. +||.+.++.+++
T Consensus        90 -~h~~~R~~~~~~fs~~-~~~~~~~i~~~~~~l~~~l~~~------~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~  160 (396)
T 1n40_A           90 -ADAGLRKAVMKAITPK-APGLEQFLRDTANSLLDNLITE------GAPADLRNDFADPLATALHCK-VLGIPQEDGPKL  160 (396)
T ss_dssp             -HHTTCHHHHHHHTSSC-STTHHHHHHHHHHHHHHHHHHH------CSCEETTTTTHHHHHHHHHHH-HHTCCGGGHHHH
T ss_pred             -HHHHHHHHHHHhhChH-HHHhHHHHHHHHHHHHHHHHhc------CCCccHHHHHHHHhHHHHHHH-HhCCChhhHHHH
Confidence             9999999999999999 9999999999999999999752      34689886664 799999998 899987654444


Q ss_pred             HHHHHHHHHHHHhhhcccccch-----------hHHHHHHhccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHH
Q 046539          222 FELIREQSHLFIEVSQFDYIPG-----------WREEALRIGKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLF  290 (484)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~p~-----------~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~  290 (484)
                      ......+.....      ..|.           +..+.++ .....+|+++.+++...+.   .+..++++++.+++..+
T Consensus       161 ~~~~~~~~~~~~------~~p~~~~~~~~~~~~~~~~~i~-~~~~~~dll~~ll~~~~~~---~~~~l~~~~i~~~~~~~  230 (396)
T 1n40_A          161 FRSLSIAFMSSA------DPIPAAKINWDRDIEYMAGILE-NPNITTGLMGELSRLRKDP---AYSHVSDELFATIGVTF  230 (396)
T ss_dssp             HHTHHHHTBCCS------SCCHHHHHHHHHHHHHHHHHHH-CTTCCSHHHHHHHHHHTSG---GGTTSCHHHHHHHHHHH
T ss_pred             HHHHHHHhcccc------CCCHHHHHHHHHHHHHHHHHHh-CCCCCCCHHHHHHHhhccc---ccCCCCHHHHHHHHHHH
Confidence            443333322110      0121           1111122 1112378999998764110   13468999999999999


Q ss_pred             HhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcc-cccccccccce
Q 046539          291 YLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAY-LIFRTNVEETK  369 (484)
Q Consensus       291 ~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~  369 (484)
                      ++||+|||+++++|++++|++||++|+++++|+                 .|++|||+|+||++|+++ .++|.+++|++
T Consensus       231 ~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~  293 (396)
T 1n40_A          231 FGAGVISTGSFLTTALISLIQRPQLRNLLHEKP-----------------ELIPAGVEELLRINLSFADGLPRLATADIQ  293 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG-----------------GGHHHHHHHHHHTCCCBCSCEEEEESSCEE
T ss_pred             HHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCH-----------------HHHHHHHHHHHhhCCCcccccceecCCCee
Confidence            999999999999999999999999999999983                 589999999999999999 69999999999


Q ss_pred             ecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHH
Q 046539          370 LGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMI  449 (484)
Q Consensus       370 i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~l  449 (484)
                      ++||.||||+.|.++.+++||||++| +||++|+||||.+          ..++|||.|+|.|+|++||++|++++++.|
T Consensus       294 ~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~~----------~~~~~FG~G~r~C~G~~lA~~e~~~~la~l  362 (396)
T 1n40_A          294 VGDVLVRKGELVLVLLEGANFDPEHF-PNPGSIELDRPNP----------TSHLAFGRGQHFCPGSALGRRHAQIGIEAL  362 (396)
T ss_dssp             ETTEEECTTCEEEECHHHHHTCTTTS-SSTTSCCTTCSST----------TCSSTTCCGGGCCTTHHHHHHHHHHHHHHH
T ss_pred             ECCEEECCCCEEEechHHhhCChhhC-CChhhCCCCCCCC----------CCCCCCCCCCcCCCCHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999 9999999999973          358999999999999999999999999999


Q ss_pred             HHhc-EEEeCCCc-ccCCCCcceeccCCCcceee
Q 046539          450 LQNF-SFQLSPTY-VHAPSSGITVYPQHGAHMIL  481 (484)
Q Consensus       450 l~~f-~~~~~~~~-~~~~~~~~~~~~~~~~~v~~  481 (484)
                      +++| +++++++. ......+.+.+...+++|++
T Consensus       363 l~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  396 (396)
T 1n40_A          363 LKKMPGVDLAVPIDQLVWRTRFQRRIPERLPVLW  396 (396)
T ss_dssp             HHHCTTCEESSCGGGCCBCCSBSBCCBSCCEEEC
T ss_pred             HHhCccccccCCccccccccccccCCcceeeeeC
Confidence            9999 59987652 33334556678888888875


No 62 
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00  E-value=1.5e-58  Score=452.26  Aligned_cols=362  Identities=16%  Similarity=0.183  Sum_probs=289.3

Q ss_pred             ccchHHHHHHHhCCce--EEe-eCCcCeEEeCCHHHHHHHHhhCCcccCCCCCcc-cc---------------cccccee
Q 046539           78 ILPYHHHIISKYGKKS--FKW-MGPRPSINVQDPKLIREILLKHDIFQKPKGNSL-GK---------------LVVNGMV  138 (484)
Q Consensus        78 ~~~~~~~~~~~yG~vf--~~~-~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~~-~~---------------~~g~~~~  138 (484)
                      |+.++.++ ++||||+  +++ +++.+.++|+++++++++++++..|+.++.... ..               .++++++
T Consensus        47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l~  125 (450)
T 3tkt_A           47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDNATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESLV  125 (450)
T ss_dssp             HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCTTTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCGG
T ss_pred             chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCcccccCCCccccccccccccccccccccccccccCcc
Confidence            88899988 6799999  888 778899999999999999988777776654321 11               1345788


Q ss_pred             ecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHH-HHHHHHHHHHHHhCCCccc
Q 046539          139 TYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHI-QALAADVISRTAFGSNYDD  217 (484)
Q Consensus       139 ~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~  217 (484)
                      ..+|+.|+++|+++.+.|++++++.+++.+.+.++++++.|.+      .+..+|+..++ ..+++++++.+ ||.+.++
T Consensus       126 ~~dg~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~~------~~~~~dl~~~~~~~~~~~vi~~l-~G~~~~~  198 (450)
T 3tkt_A          126 QMDAPKHPKLRRLTQDWFMPKNLARLDGEIRKIANEAIDRMLG------AGEEGDFMALVAAPYPLHVVMQI-LGVPPED  198 (450)
T ss_dssp             GCCTTHHHHHHHHHHTTTSHHHHGGGHHHHHHHHHHHHHHHHH------TCSEEEHHHHTTTHHHHHHHHHH-TTCCGGG
T ss_pred             cCCCHHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHHHh------cCCCEeeHHHHHHHHHHHHHHHH-cCCChhH
Confidence            8999999999999999999999999999999999999999975      24579998888 69999999995 9987665


Q ss_pred             hhHHHHHHHHHHHHHHhhhc--ccccc----hhH-------------HHHHH-hccCCchhHHHHHHHhhhHhhHHhhcC
Q 046539          218 GRKIFELIREQSHLFIEVSQ--FDYIP----GWR-------------EEALR-IGKASNDDLLGLLMESNYKEIQEKEAG  277 (484)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~--~~~~p----~~~-------------~~~~~-~~~~~~~~~l~~ll~~~~~~~~~~~~~  277 (484)
                      .+++......+.........  ..+..    ...             .+.++ ......+|+++.|++...+     +..
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~-----~~~  273 (450)
T 3tkt_A          199 EPKMLFLTQQMFGGQDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNPTDDVATVIANAVVD-----GEP  273 (450)
T ss_dssp             HHHHHHHHHTTSCCC----------------HHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHTCEET-----TEE
T ss_pred             HHHHHHHHHHHhccccchhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhcccc-----CCC
Confidence            44444444333221111000  00000    000             11111 1122456899988876432     345


Q ss_pred             CCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCc
Q 046539          278 MSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPA  357 (484)
Q Consensus       278 l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~  357 (484)
                      ++++++.+++..+++||+|||+++++|++++|++||++|+++++|+                 +|+++||+|+||++|++
T Consensus       274 ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~LRl~pp~  336 (450)
T 3tkt_A          274 MSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADR-----------------NLLPGIVEEAIRWTTPV  336 (450)
T ss_dssp             CCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG-----------------GGHHHHHHHHHHHHCSB
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCH-----------------HHHHHHHHHHHHhCCCc
Confidence            9999999999999999999999999999999999999999999983                 68999999999999999


Q ss_pred             ccccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHH
Q 046539          358 YLIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNF  437 (484)
Q Consensus       358 ~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~l  437 (484)
                      +.++|.+++|++++||.||||+.|.++.+++||||++| +||++|+||||.           ..++|||.|+|.|+|++|
T Consensus       337 ~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~r~C~G~~l  404 (450)
T 3tkt_A          337 QHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQF-PEPRKFDPTRPA-----------NRHLAFGAGSHQCLGLHL  404 (450)
T ss_dssp             CEEEEEESSSEEETTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTSCT-----------TCSSTTCCSTTCCTTHHH
T ss_pred             cCcceeeCCCeeECCEEECCCCEEEEChHHhcCChhhC-CCcCeeCCCCCC-----------CCCCCCCCcCccCccHHH
Confidence            99899999999999999999999999999999999999 999999999942           468999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcE-EEeCCCcccCCCCcceeccCCCcceeeec
Q 046539          438 ALMEVKLALAMILQNFS-FQLSPTYVHAPSSGITVYPQHGAHMILNK  483 (484)
Q Consensus       438 a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  483 (484)
                      |++|++++++.|+++|+ +++++....  ..+...+....++|++++
T Consensus       405 A~~e~~~~l~~ll~~f~~~~l~~~~~~--~~~~~~~g~~~lpv~~~~  449 (450)
T 3tkt_A          405 ARLEMRVLLDVLLDRVDSLELAGEPKR--VNSTFVGGFKSLPMRWKA  449 (450)
T ss_dssp             HHHHHHHHHHHHHHHEEEEEESSCCEE--CCCSSBCCEEECEEEEEE
T ss_pred             HHHHHHHHHHHHHHhCCCceeCCCccc--ccCcccCCcccceEEEec
Confidence            99999999999999998 777643322  333445555678999876


No 63 
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00  E-value=3.1e-59  Score=450.94  Aligned_cols=366  Identities=14%  Similarity=0.168  Sum_probs=288.8

Q ss_pred             CccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCCcccCCCCCccc---cccccceeecCCcchhHHH
Q 046539           73 DIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHDIFQKPKGNSLG---KLVVNGMVTYEGEQWSKVR  149 (484)
Q Consensus        73 ~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~R  149 (484)
                      .+..+|+.++.+++++ |||+++..++ +.++++||+++++++.+++.|++++.....   ...+.+++..+|+.|+++|
T Consensus        21 ~~~~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~h~~~R   98 (396)
T 3oft_A           21 GVEQDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDAERLSSQCLAVTPGLGKVMQFIPLQQDGAEHKAFR   98 (396)
T ss_dssp             TTTTCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCTTTEESTTCCSSTTHHHHHCCTTTTCCHHHHHHHH
T ss_pred             hhhcChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCcccccCCcccCCCccccccccCccccCCcHHHHHH
Confidence            3456899999999999 9999998874 499999999999999876677776532211   1223457788999999999


Q ss_pred             hhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHH-HHHHHHHHHHHHhCCCccchhHHHHHHHHH
Q 046539          150 KIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHI-QALAADVISRTAFGSNYDDGRKIFELIREQ  228 (484)
Q Consensus       150 ~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~  228 (484)
                      +++.+.|++++++.+++.+.+.++++++.|.+       ++.+|+...+ ..++.++++. +||.+.++.+++..+...+
T Consensus        99 ~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~-------~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~~~~~~~~~~~~  170 (396)
T 3oft_A           99 TPVMKGLASRFVVALEPKVQAVARKLMESLRP-------RGSCDFVSDFAEILPLNIFLT-LIDVPLEDRPRLRQLGVQL  170 (396)
T ss_dssp             HHHHHHTCHHHHHHHHHHHHHHHHHHHHHHGG-------GSEEEHHHHTTTTHHHHHHHH-HTTCCGGGHHHHHHHHHHH
T ss_pred             HHhhhhhCHHHHHHHHHHHHHHHHHHHHHhhh-------cCCccHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999873       2368887666 4566777766 7898766555554444433


Q ss_pred             HHHHHhhhc---ccccchhHHHHHH-hccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHH
Q 046539          229 SHLFIEVSQ---FDYIPGWREEALR-IGKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVW  304 (484)
Q Consensus       229 ~~~~~~~~~---~~~~p~~~~~~~~-~~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~  304 (484)
                      .........   ...+-.+..+.++ ......+|+++.+++...+     +..++++++.+++..+++||+|||+++++|
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~d~l~~ll~~~~~-----~~~l~~~el~~~~~~l~~AG~dTta~~l~~  245 (396)
T 3oft_A          171 TRPDGSMTVEQLKQAADDYLWPFIEKRMAQPGDDLFSRILSEPVG-----GRPWTVDEARRMCRNLLFGGLDTVAAMIGM  245 (396)
T ss_dssp             HSCCSSCCHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHTSCBT-----TBCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhhcc-----CCCCCHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence            211000000   0000000011111 1122567999999976432     346999999999999999999999999999


Q ss_pred             HHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCCeEEec
Q 046539          305 VLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLSLP  384 (484)
Q Consensus       305 ~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~~~  384 (484)
                      ++++|++||++|+++++|+                 .|++|||+|+||++|++ .++|.+++|++++||.||||+.|.++
T Consensus       246 ~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~-~~~R~~~~d~~~~g~~Ip~G~~V~~~  307 (396)
T 3oft_A          246 VALHLARHPEDQRLLRERP-----------------DLIPAAADELMRRYPTV-AVSRNAVADVDADGVTIRKGDLVYLP  307 (396)
T ss_dssp             HHHHHHHCHHHHHHHHHCG-----------------GGHHHHHHHHHHHCCCB-EEEEEESSCEEETTEEECTTCEEEEE
T ss_pred             HHHHHHhCHHHHHHHHhCH-----------------HhHHHHHHHHHHhcCcc-cCceecCCCEEECCEEECCCCEEEeC
Confidence            9999999999999999984                 48999999999999999 88999999999999999999999999


Q ss_pred             hhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhc-EEEeCCCccc
Q 046539          385 IILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNF-SFQLSPTYVH  463 (484)
Q Consensus       385 ~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~~~~~~  463 (484)
                      .+++||||++| +||++|+||||+.+         ..++|||.|+|.|+|++||++|++++++.|+++| +++++++...
T Consensus       308 ~~~~~rdp~~~-~dp~~F~PeR~~~~---------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~~l~~~~~~  377 (396)
T 3oft_A          308 SVLHNLDPASF-EAPEEVRFDRGLAP---------IRHTTMGVGAHRCVGAGLARMEVIVFLREWLGGMPEFALAPDKAV  377 (396)
T ss_dssp             THHHHTCTTTS-SSTTSCCSCCCCCG---------GGSSTTCCGGGCCTTHHHHHHHHHHHHHHHHHHSCCEEECSSSCC
T ss_pred             hHHhCCCcccC-CCcCccCCCCCCCC---------CCcccCCCCCccCcCHHHHHHHHHHHHHHHHHhCCCceECCCCCc
Confidence            99999999999 99999999999743         5799999999999999999999999999999999 9999876433


Q ss_pred             CCCCcceeccCCCcceeee
Q 046539          464 APSSGITVYPQHGAHMILN  482 (484)
Q Consensus       464 ~~~~~~~~~~~~~~~v~~~  482 (484)
                      .... ...+....++|++.
T Consensus       378 ~~~~-~~~~~~~~lpv~~~  395 (396)
T 3oft_A          378 TMKG-GNVGACTALPLVWR  395 (396)
T ss_dssp             EEEC-SSBCEEEECEEEEC
T ss_pred             eecc-ccccCcccceEEeC
Confidence            2222 23444446888775


No 64 
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00  E-value=1.2e-58  Score=450.22  Aligned_cols=363  Identities=17%  Similarity=0.247  Sum_probs=288.9

Q ss_pred             CccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCCcccCCCCCc-c----------ccccccceeecC
Q 046539           73 DIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHDIFQKPKGNS-L----------GKLVVNGMVTYE  141 (484)
Q Consensus        73 ~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~-~----------~~~~g~~~~~~~  141 (484)
                      .+..+|+.++.++ ++||||+++++|   .++|+||++++++++++..++..+... .          ....+.++++.+
T Consensus        26 ~~~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d  101 (418)
T 3r9b_A           26 ATRADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHPSSCSDRTKSTIFQRQLAAETQPRPQGPASFLFLD  101 (418)
T ss_dssp             GGTTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCTTEECCGGGCHHHHHHHC---------CCCGGGCC
T ss_pred             hhccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCcccccCcccccccccccccccccccccccchhhcC
Confidence            3456889999988 688999988776   999999999999998765444333221 1          123456788899


Q ss_pred             CcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHH-HHHHHHHHHHHHhCCCccchhH
Q 046539          142 GEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHI-QALAADVISRTAFGSNYDDGRK  220 (484)
Q Consensus       142 ~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~  220 (484)
                      |+.|+++|+++++.|++++++.+++.+.+.++++++ +.       .++.+|+...+ ..+++++++. +||.+.++.+.
T Consensus       102 g~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~-l~-------~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~  172 (418)
T 3r9b_A          102 PPDHTRLRGLVSKAFAPRVIKRLEPEITALVDQLLD-AV-------DGPEFNLIDNLAYPLPVAVICR-LLGVPIEDEPK  172 (418)
T ss_dssp             TTHHHHHHHHHHGGGSHHHHGGGHHHHHHHHHHHHH-TC-------CSSEEEHHHHTTTHHHHHHHHH-HHTCCGGGHHH
T ss_pred             CchHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHh-hh-------ccCCeehHHHHhCcCCHHHHHH-HcCCCHHHHHH
Confidence            999999999999999999999999999999999999 74       23478987665 5899999999 89998766555


Q ss_pred             HHHHHHHHHHHHHhhhcccccc--hhH-------------HHHHHh-ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHH
Q 046539          221 IFELIREQSHLFIEVSQFDYIP--GWR-------------EEALRI-GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVI  284 (484)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~p--~~~-------------~~~~~~-~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~  284 (484)
                      +......+...+........++  ...             .+.++. .....+|+++.+++...     .+..++++++.
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~d~l~~ll~~~~-----~~~~ls~~ei~  247 (418)
T 3r9b_A          173 FSRASALLAAALDPFLALTGETSDLFDEQMKAGMWLRDYLRALIDERRRTPGEDLMSGLVAVEE-----SGDQLTEDEII  247 (418)
T ss_dssp             HHHHHHHHHHTTSCHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHHHTTTSCCSSHHHHHHHHHH-----HSSSCCHHHHH
T ss_pred             HHHHHHHHHhhcCccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHhhh-----ccCCCCHHHHH
Confidence            5444444332221111000011  111             112222 22346789999987632     23469999999


Q ss_pred             HHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccccccc
Q 046539          285 EECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTN  364 (484)
Q Consensus       285 ~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~  364 (484)
                      +++..+++||+|||+++++|++++|++||++|+++++|+                 .|++|||+|+||++|+++.+.|++
T Consensus       248 ~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~~~~R~~  310 (418)
T 3r9b_A          248 ATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADG-----------------SRASAVIEETMRYDPPVQLVSRYA  310 (418)
T ss_dssp             HHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCG-----------------GGHHHHHHHHHHHSCSBCCEEEEE
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhCh-----------------HhHHHHHHHHHHhCCccccceeEe
Confidence            999999999999999999999999999999999999984                 489999999999999999988999


Q ss_pred             cccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHH
Q 046539          365 VEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKL  444 (484)
Q Consensus       365 ~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~  444 (484)
                      ++|++++||.||||+.|.++.+++||||++| +||++|+|||+          + ..++|||.|+|.|+|++||++|+++
T Consensus       311 ~~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~~-~dp~~F~p~R~----------~-~~~~~FG~G~r~C~G~~lA~~e~~~  378 (418)
T 3r9b_A          311 GDDLTIGTHTVPKGDTMLLLLAAAHRDPTIV-GAPDRFDPDRA----------Q-IRHLGFGKGAHFCLGAPLARLEATV  378 (418)
T ss_dssp             SSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCS----------C-CCCCTTCCGGGCCTTHHHHHHHHHH
T ss_pred             CCCeEECCEEECCCCEEEEChHHhcCCcccC-CCcCcCCCCCC----------C-CCCcCCCCcCccCccHHHHHHHHHH
Confidence            9999999999999999999999999999999 99999999991          1 5689999999999999999999999


Q ss_pred             HHHHHHHhc-EEEeCCCcccCCCCcceeccCCCcceeeecC
Q 046539          445 ALAMILQNF-SFQLSPTYVHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       445 ~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      +++.|+++| +++++++.  ....+.++++..+++|++.||
T Consensus       379 ~l~~ll~~f~~~~l~~~~--~~~~~~~~~~~~~lpv~~~~r  417 (418)
T 3r9b_A          379 ALPALAARFPEARLSGEP--EYKRNLTLRGMSTLSIAVHHH  417 (418)
T ss_dssp             HHHHHHHHCTTCEECSCC--EECSCSSBCCEEECEEEC---
T ss_pred             HHHHHHHhCccceeCCCC--ccccCCcccCcceeEEEecCC
Confidence            999999999 79988653  234556778888999999887


No 65 
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00  E-value=4.1e-58  Score=445.68  Aligned_cols=359  Identities=17%  Similarity=0.229  Sum_probs=290.3

Q ss_pred             ccccchHHHHHHHhCCceEEee-CCcCeEEeCCHHHHHHHHhhCCcccCCC---CCcc---------ccccccceeecCC
Q 046539           76 PRILPYHHHIISKYGKKSFKWM-GPRPSINVQDPKLIREILLKHDIFQKPK---GNSL---------GKLVVNGMVTYEG  142 (484)
Q Consensus        76 ~~~~~~~~~~~~~yG~vf~~~~-~~~~~vvv~dp~~i~~vl~~~~~~~~~~---~~~~---------~~~~g~~~~~~~~  142 (484)
                      ++|+.++.+++++ |||+++.. ++.+.++|+++++++++++++..|++.+   ....         ..+.+.+++..||
T Consensus        38 ~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg  116 (426)
T 3rwl_A           38 DSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNHDIFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAMDR  116 (426)
T ss_dssp             TCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCTTTEECCGGGTCSSSSCCC-------CCCCCGGGCCT
T ss_pred             CCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCCcccccccccCCCCcccccccccccccccCcccccCc
Confidence            3688899999876 99999987 4577999999999999998877676654   1111         1223456788999


Q ss_pred             cchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHH-HHHHHHHHHHHHhCCCccchhHH
Q 046539          143 EQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHI-QALAADVISRTAFGSNYDDGRKI  221 (484)
Q Consensus       143 ~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~  221 (484)
                      +.|+++|+++++.|++++++.+++.+.+.++++++.|.       .+.++|+...+ ..++.++++. +||.+.++.+.+
T Consensus       117 ~~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~ll~~l~-------~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~~~~  188 (426)
T 3rwl_A          117 PRHDEQRKAVSPIVAPANLAALEGTIRERVSKTLDGLP-------VGEEFDWVDRVSIEITTQMLAT-LFDFPFEERRKL  188 (426)
T ss_dssp             THHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHTSC-------SSSCEEHHHHTHHHHHHHHHHH-HHTCCGGGTHHH
T ss_pred             hHHHHHHHHhhhhhCHHHHHHHHHHHHHHHHHHHHHhh-------cCCCcchHHHHHHHHHHHHHHH-HcCCCHHHHHHH
Confidence            99999999999999999999999999999999999884       45579988877 5788888876 899876655444


Q ss_pred             HHHHHHHHHHHHhhhcccccchhH-------------HHHHHh--ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHH
Q 046539          222 FELIREQSHLFIEVSQFDYIPGWR-------------EEALRI--GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEE  286 (484)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~p~~~-------------~~~~~~--~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~  286 (484)
                      ..+...+.....    ....+...             .+.+++  .....+|+++.+++...+      +++++++++++
T Consensus       189 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~dll~~ll~~~~~------~~ls~~el~~~  258 (426)
T 3rwl_A          189 TRWSDVTTAAPG----GGVVESWDQRKTELLECAAYFQVLWNERVNKDPGNDLISMLAHSPAT------RNMTPEEYLGN  258 (426)
T ss_dssp             HHHHHHHTCCTT----SSSCSSHHHHHHHHHHHHHHHHHHHHHHHTSCCCSSHHHHHHHCGGG------GGCCHHHHHHH
T ss_pred             HHHHHHHHhccC----ccccccHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHhcccC------CCCCHHHHHHH
Confidence            433322211110    01111111             111111  233567999999976432      24899999999


Q ss_pred             HHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccccccccc
Q 046539          287 CKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVE  366 (484)
Q Consensus       287 ~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~  366 (484)
                      +..+++||+|||+++++|++++|++||++|+++++|                 ++|+++||+|+||++|+++.++|.+++
T Consensus       259 ~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E-----------------~~~l~a~i~E~LRl~p~~~~~~R~~~~  321 (426)
T 3rwl_A          259 VLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKAN-----------------PALVETMVPEIIRWQTPLAHMRRTAIA  321 (426)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHC-----------------GGGHHHHHHHHHHHHCSBCCEEEEESS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhC-----------------hHhHHHHHHHHHHhcCccccCceecCC
Confidence            999999999999999999999999999999999998                 479999999999999999999999999


Q ss_pred             cceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHH
Q 046539          367 ETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLAL  446 (484)
Q Consensus       367 d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l  446 (484)
                      |++++||.||||+.|+++.+++||||++| +||++|+|+||.+          ..++|||.|+|.|+|++||++|+++++
T Consensus       322 d~~l~G~~Ip~G~~V~~~~~~~~rDp~~f-~dP~~F~p~R~~~----------~~~l~FG~G~r~C~G~~lA~~e~~~~l  390 (426)
T 3rwl_A          322 DSELGGKTIRKGDKVVMWYYSGNRDDEVI-DRPEEFIIDRPRP----------RQHLSFGFGIHRCVGNRLAEMQLRILW  390 (426)
T ss_dssp             CEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCSCT----------TCCSTTCCSTTSCSSHHHHHHHHHHHH
T ss_pred             CeEECCEEECCCCEEEechHHhCCCcccc-CCcCccCCCCCCC----------CCccCCCCCCcCCccHHHHHHHHHHHH
Confidence            99999999999999999999999999999 9999999999943          468999999999999999999999999


Q ss_pred             HHHHHhc-EEEeCCCcccCCCCcceeccCCCcceeeec
Q 046539          447 AMILQNF-SFQLSPTYVHAPSSGITVYPQHGAHMILNK  483 (484)
Q Consensus       447 ~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  483 (484)
                      +.|+++| +++++++...  ..+...+....++|+++|
T Consensus       391 ~~ll~~f~~~~l~~~~~~--~~~~~~~g~~~lpv~~~P  426 (426)
T 3rwl_A          391 EEILTRFSRIEVMAEPER--VRSNFVRGYAKMMVRVHA  426 (426)
T ss_dssp             HHHHTTCSEEEECSCCEE--CCCSSBCCEEECEEEEEC
T ss_pred             HHHHHhCccCeeCCCCcc--cccccccCcceeeEEEeC
Confidence            9999999 9999865433  334455666789999886


No 66 
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00  E-value=3.8e-58  Score=445.75  Aligned_cols=343  Identities=18%  Similarity=0.242  Sum_probs=280.9

Q ss_pred             cccccchHHHHHHHhCCceEEeeC-CcCeEEeCCHHHHHHHHhhCCcccCCCC---C-cccc------ccccceeecCCc
Q 046539           75 VPRILPYHHHIISKYGKKSFKWMG-PRPSINVQDPKLIREILLKHDIFQKPKG---N-SLGK------LVVNGMVTYEGE  143 (484)
Q Consensus        75 ~~~~~~~~~~~~~~yG~vf~~~~~-~~~~vvv~dp~~i~~vl~~~~~~~~~~~---~-~~~~------~~g~~~~~~~~~  143 (484)
                      ..+|+.++.+++++ ||||+++++ +.+.|+++||+++++++.++ .|++.+.   . ....      ..+.++++.+|+
T Consensus        28 ~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~  105 (417)
T 3tyw_A           28 PFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP-RVSADIRRPGFPALGEGEQEAGARFRPFIRTDAP  105 (417)
T ss_dssp             TTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT-TEECCSSSTTCCCSSTTTSTTSSSCCCGGGCCHH
T ss_pred             ccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC-CcccCCccccccccccccccccccccchhhcCCc
Confidence            35888999999988 999999997 58899999999999999887 5665421   1 1222      245678889999


Q ss_pred             chhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHH-HHHHHHHHHHHHhCCCccchhHHH
Q 046539          144 QWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHI-QALAADVISRTAFGSNYDDGRKIF  222 (484)
Q Consensus       144 ~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~  222 (484)
                      .|+++|+++.+.|++++++.+++.+.+.++++++.|.+.      +.++|+..++ ..++.++++.+ ||.+.++.+.+.
T Consensus       106 ~h~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~------g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~~~~  178 (417)
T 3tyw_A          106 EHTRYRRMLLPAFTVRRVRAMRPAVQARVDEILDGMLAA------GGPVDLVSAYANAVSTSVICEL-LGIPRHDLEFFR  178 (417)
T ss_dssp             HHHHHHHHHGGGGCHHHHHHTHHHHHHHHHHHHHHHHHH------CSSEEHHHHTHHHHHHHHHHHH-HTCCTTTTTHHH
T ss_pred             HHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHhh------CCCcchHHHHHHHHHHHHHHHH-hCCCHHHHHHHH
Confidence            999999999999999999999999999999999999862      3469999988 57899999986 999877655554


Q ss_pred             HHHHHHHHHHHhhh-c---ccccchhHHHHHH-hccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhccccc
Q 046539          223 ELIREQSHLFIEVS-Q---FDYIPGWREEALR-IGKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQET  297 (484)
Q Consensus       223 ~~~~~~~~~~~~~~-~---~~~~p~~~~~~~~-~~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~t  297 (484)
                      .+...+........ .   ...+-.+..+.++ ......+|+++.+++...+     ++.++++++.+++..+++||+||
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~~~d~l~~ll~~~~~-----~~~ls~~el~~~~~~l~~AG~eT  253 (417)
T 3tyw_A          179 DVTRISGSRNSTAEQVSEALGGLFGLLGGLVAERREEPRDDLISKLVTDHLV-----PGNVTTEQLLSTLGITINAGRET  253 (417)
T ss_dssp             HHHHHHHSSSSCTTHHHHHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHTTT-----TTSSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHhccc-----CCCCCHHHHHHHHHHHHhhhHHH
Confidence            44433321110000 0   0000000011122 1223467999999976543     23699999999999999999999


Q ss_pred             HHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCccc-ccccccccceecCEEeC
Q 046539          298 TASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYL-IFRTNVEETKLGDFILP  376 (484)
Q Consensus       298 t~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip  376 (484)
                      |+++++|++++|++||++|+++++|+                 .|++|||+|+||++|+++. ++|.+++|++++||.||
T Consensus       254 ta~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip  316 (417)
T 3tyw_A          254 TTSMIALSTLLLLDRPELPAELRKDP-----------------DLMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVP  316 (417)
T ss_dssp             HHHHHHHHHHHHHHCTHHHHHHHHCG-----------------GGHHHHHHHHHHHHCSCTTCCEEEESSCEECSSCEEC
T ss_pred             HHHHHHHHHHHHHcCHHHHHHHHhCh-----------------HHHHHHHHHHHHhccccccCceeEeCCCeEECCEEEC
Confidence            99999999999999999999999983                 5899999999999999998 78999999999999999


Q ss_pred             CCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhc-EE
Q 046539          377 PGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNF-SF  455 (484)
Q Consensus       377 ~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-~~  455 (484)
                      ||+.|.++.+++||||++| +||++|+||||.           ..++|||.|+|.|+|++||++|++++++.|+++| ++
T Consensus       317 ~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~  384 (417)
T 3tyw_A          317 ADDGVIALLAGANHDPEQF-DDPERVDFHRTD-----------NHHVAFGYGVHQCVGQHLARLELEVALETLLRRVPTL  384 (417)
T ss_dssp             TTCEEEECHHHHTTCTTTS-SSTTSCCTTCSC-----------CCCCTTCCSTTCCSCHHHHHHHHHHHHHHHHHHCTTC
T ss_pred             CCCEEEEehhhhcCChhhc-CCccccCCCCCC-----------CCCCCCCCCCccCcCHHHHHHHHHHHHHHHHHhCCcc
Confidence            9999999999999999999 999999999993           4689999999999999999999999999999999 99


Q ss_pred             EeCCC
Q 046539          456 QLSPT  460 (484)
Q Consensus       456 ~~~~~  460 (484)
                      +++.+
T Consensus       385 ~l~~~  389 (417)
T 3tyw_A          385 RLAGE  389 (417)
T ss_dssp             EECSC
T ss_pred             cccCC
Confidence            99743


No 67 
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00  E-value=2.2e-58  Score=448.05  Aligned_cols=361  Identities=17%  Similarity=0.190  Sum_probs=291.6

Q ss_pred             CccccccchHHHHHHHhC-CceEEeeCCcCeEEeCCHHHHHHHHhhCCcccCCCCCcc---ccccccceeecCCcchhHH
Q 046539           73 DIVPRILPYHHHIISKYG-KKSFKWMGPRPSINVQDPKLIREILLKHDIFQKPKGNSL---GKLVVNGMVTYEGEQWSKV  148 (484)
Q Consensus        73 ~~~~~~~~~~~~~~~~yG-~vf~~~~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~  148 (484)
                      .+..+|+.++.++++++| ||+++..++ +.++|+||+++++++++.+.|++++....   ....+.++++.+|+.|+++
T Consensus        35 ~~~~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~dg~~h~~~  113 (421)
T 3lxh_A           35 GLEQGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYRSPERFSSRVIWVPREAGEAYDMVPTKLDPPEHTPY  113 (421)
T ss_dssp             TGGGCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCTTTEETTCCSSSHHHHHHCCCTTTTCCTTTHHHH
T ss_pred             hhhcChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHcChhhccCCcccCCcccccccccCCccCCcHHHHHH
Confidence            345689999999987766 899998876 49999999999999976667777663221   1122346778899999999


Q ss_pred             HhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHH-HHHHHHHHHHHHhCCCccchhHHHHHHHH
Q 046539          149 RKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHI-QALAADVISRTAFGSNYDDGRKIFELIRE  227 (484)
Q Consensus       149 R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~  227 (484)
                      |+++.+.|++++++++++.+.+.++++++.|.+       ++.+|+...+ ..++.++++. +||.+.++.+++..+...
T Consensus       114 R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-------~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~~~~~~~~~~~  185 (421)
T 3lxh_A          114 RKAIDKGLNLAEIRKLEDQIRTIAVEIIEGFAD-------RGHCEFGSEFSTVFPVRVFLA-LAGLPVEDATKLGLLANE  185 (421)
T ss_dssp             HHHHHHHHSHHHHHTTHHHHHHHHHHHHHTTTT-------TSEEEHHHHTTTTHHHHHHHH-HHTCCGGGHHHHHHHHHH
T ss_pred             HHHHhhhcCHHHHHHHHHHHHHHHHHHHHHHhh-------cCCeehHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHH
Confidence            999999999999999999999999999998862       3468876666 5577777776 689887665555554444


Q ss_pred             HHHHHHhhhcccccchhH---------------HHHHH-hccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHH
Q 046539          228 QSHLFIEVSQFDYIPGWR---------------EEALR-IGKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFY  291 (484)
Q Consensus       228 ~~~~~~~~~~~~~~p~~~---------------~~~~~-~~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~  291 (484)
                      +....      .++|...               .+.++ ......+|+++.+++...+     +.+++++++.+++..++
T Consensus       186 ~~~~~------~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~~~-----~~~l~~~ei~~~~~~l~  254 (421)
T 3lxh_A          186 MTRPS------GNTPEEQGRSLEAANKGFFEYVAPIIAARRGGSGTDLITRILNVEID-----GKPMPDDRALGLVSLLL  254 (421)
T ss_dssp             HHSCC------CSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHTSCBT-----TBCCCHHHHHHHHHHHH
T ss_pred             Hhccc------cCCCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhhhcc-----CCCCCHHHHHHHHHHHH
Confidence            33211      1222211               11122 1223467899999976432     34699999999999999


Q ss_pred             hcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceec
Q 046539          292 LAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLG  371 (484)
Q Consensus       292 ~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~  371 (484)
                      +||+|||+++++|++++|++||++|+++++|++                 |+++||+|+||++|++ .++|.+++|++++
T Consensus       255 ~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~l~a~i~E~lRl~p~~-~~~R~~~~d~~l~  316 (421)
T 3lxh_A          255 LGGLDTVVNFLGFMMIYLSRHPETVAEMRREPL-----------------KLQRGVEELFRRFAVV-SDARYVVSDMEFH  316 (421)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHH-----------------HHHHHHHHHHHHCCCB-EEEEEECSCEEET
T ss_pred             HHhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------HHHHHHHHHHHhcCcc-CCceeeCCCeeEC
Confidence            999999999999999999999999999999963                 7899999999999999 9899999999999


Q ss_pred             CEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHH
Q 046539          372 DFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQ  451 (484)
Q Consensus       372 g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~  451 (484)
                      ||.||||+.|.++.+++||||++| +||++|+||||          + ..++|||.|+|.|+|++||++|++++++.|++
T Consensus       317 G~~Ip~G~~V~~~~~~~~rdp~~~-~dP~~F~PeR~----------~-~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~  384 (421)
T 3lxh_A          317 GTMLKEGDLILLPTALHGLDDRHH-DDPMTVDLSRR----------D-VTHSTFAQGPHRCAGMHLARLEVTVMLQEWLA  384 (421)
T ss_dssp             TEEECTTCEEEEETHHHHTCTTTS-SSTTSCCTTCS----------C-CCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHH
T ss_pred             CEEECCCCEEEEchhhhCCChhhC-CCcCeeCCCCC----------C-CCCCCCCCcCccCcCHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999 99999999994          1 57999999999999999999999999999999


Q ss_pred             hc-EEEeCCCcccCCCCcceeccCCCcceeeecC
Q 046539          452 NF-SFQLSPTYVHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       452 ~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                      +| +++++++.......+ ..+....++|+++||
T Consensus       385 ~fp~~~l~~~~~~~~~~~-~~~~~~~lpv~~~p~  417 (421)
T 3lxh_A          385 RIPEFRLKDRAVPIYHSG-IVAAVENIPLEWEPQ  417 (421)
T ss_dssp             HCCCCEECTTCCCEEECS-SBCEEECCEEECCCC
T ss_pred             hCCCcEECCCCCceeccc-cccCceeeeEEEecc
Confidence            99 999987644332333 344445699999886


No 68 
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00  E-value=1.9e-57  Score=436.66  Aligned_cols=361  Identities=17%  Similarity=0.226  Sum_probs=287.5

Q ss_pred             CccccccchHHHHHHHhCCceEEeeCC----cCeEEeCCHHHHHHHHhhCCcccCCCCCc---cccccccceeecCCcch
Q 046539           73 DIVPRILPYHHHIISKYGKKSFKWMGP----RPSINVQDPKLIREILLKHDIFQKPKGNS---LGKLVVNGMVTYEGEQW  145 (484)
Q Consensus        73 ~~~~~~~~~~~~~~~~yG~vf~~~~~~----~~~vvv~dp~~i~~vl~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~  145 (484)
                      .+..+|+.++.++ ++||||+++++++    .++|+++||+++++++++...|++++...   .....+.+++..+|+.|
T Consensus         9 ~~~~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~   87 (384)
T 3oo3_A            9 RLRLDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILADHERFSSMRPVDDEADRALLPGILQAYDPPDH   87 (384)
T ss_dssp             EETTEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHHHCTTTEECSCCCC-----CCCTTCGGGCCTTHH
T ss_pred             ccccChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHHhCchhccCCccccccccccccccccccCCChhH
Confidence            3446899999999 5999999999986    89999999999999996655788776543   12333456778899999


Q ss_pred             hHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHHHHHHHhCCCccchhHHHHHH
Q 046539          146 SKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHIQALAADVISRTAFGSNYDDGRKIFELI  225 (484)
Q Consensus       146 ~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~  225 (484)
                      +++|+++.+.|++++++.+.+.+.+.++++++.|.+      .+.++|+.+++...+.+.+...+||.+.++.+++....
T Consensus        88 ~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~------~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~~~~~~~~  161 (384)
T 3oo3_A           88 TRLRRTVAPAYSARRMERLRPRIEEIVEECLDDFES------VGAPVDFVRHAAWPIPAYIACEFLGVPRDDQAELSRMI  161 (384)
T ss_dssp             HHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHH------SCSSEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHH
T ss_pred             HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHh------cCCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999975      34579999999888877777779999876655555544


Q ss_pred             HHHHHHHHhhhcc---cccchhHHHHHH-hccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHH
Q 046539          226 REQSHLFIEVSQF---DYIPGWREEALR-IGKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASL  301 (484)
Q Consensus       226 ~~~~~~~~~~~~~---~~~p~~~~~~~~-~~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~  301 (484)
                      ..+..........   ..+-.+..+.++ ......+|+++.+++..       +..++++++.+++..+++||+|||+++
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~d~l~~ll~~~-------~~~l~~~~l~~~~~~~~~AG~~Tta~~  234 (384)
T 3oo3_A          162 RESRESRLPRQRTLSGLGIVNYTKRLTSGKRRDPGDGMIGVIVREH-------GAEISDEELAGLAEGNLIMAAEQMAAQ  234 (384)
T ss_dssp             HHHHHCSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHH-------GGGSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhccCChHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhc-------CCCCCHHHHHHHHHHHHHhhHHHHHHH
Confidence            4432200000000   000000011111 11234678999999762       235899999999999999999999999


Q ss_pred             HHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCccc-ccccccccceecCEEeCCCCe
Q 046539          302 LVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYL-IFRTNVEETKLGDFILPPGVL  380 (484)
Q Consensus       302 l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~G~~  380 (484)
                      ++|++++|++||++|+++++|++.                 ++|||+|+||++|+++. ++|.+++|++++||.||||+.
T Consensus       235 l~~~l~~L~~~P~~~~~l~~E~~~-----------------l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~  297 (384)
T 3oo3_A          235 LAVAVLLLVTHPDQMALLREKPEL-----------------IDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDV  297 (384)
T ss_dssp             HHHHHHHHHTSHHHHHHHHHCGGG-----------------HHHHHHHHHHHHCSCSCCSCEEESSCEEETTEEECTTCE
T ss_pred             HHHHHHHHHHCHHHHHHHHhCHHH-----------------HHHHHHHHHHhCCcccCCcceeeCCCEEECCEEECCCCE
Confidence            999999999999999999999644                 89999999999999986 899999999999999999999


Q ss_pred             EEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhc-EEEeCC
Q 046539          381 LSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNF-SFQLSP  459 (484)
Q Consensus       381 v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~~  459 (484)
                      |.++.+++||      +||++|+||||-           ..++|||.|+|.|+|++||++|++++++.|+++| ++++++
T Consensus       298 V~~~~~~~~r------~dp~~F~PeR~~-----------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~  360 (384)
T 3oo3_A          298 LTCSMLATNR------APGDRFDITREK-----------ATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRFPSLRLAV  360 (384)
T ss_dssp             EEECHHHHHC------CTTCCCCTTCSC-----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESS
T ss_pred             EEEehhhcCC------CCcceeCCCCCC-----------CCcCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCCeeCC
Confidence            9999999999      799999999952           5799999999999999999999999999999999 999986


Q ss_pred             Cccc-CCCC-cceeccCCCcceee
Q 046539          460 TYVH-APSS-GITVYPQHGAHMIL  481 (484)
Q Consensus       460 ~~~~-~~~~-~~~~~~~~~~~v~~  481 (484)
                      +... .... +.+.++...++|++
T Consensus       361 ~~~~~~~~~~~~~~~~~~~lpv~~  384 (384)
T 3oo3_A          361 PEEDLRFKPGRPAPFAVEELPLEW  384 (384)
T ss_dssp             CGGGCCEECSSSSCCEESCCEEEC
T ss_pred             CCccceeecccccccCcceeeeeC
Confidence            5332 2233 55667777888864


No 69 
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00  E-value=5.6e-58  Score=441.81  Aligned_cols=360  Identities=14%  Similarity=0.239  Sum_probs=275.7

Q ss_pred             cccchHHHHHHHhCCceEEeeC-Cc---CeEEeCCHHHHHHHH-hhCCcccCCCC-------C--c-cc-cccccceeec
Q 046539           77 RILPYHHHIISKYGKKSFKWMG-PR---PSINVQDPKLIREIL-LKHDIFQKPKG-------N--S-LG-KLVVNGMVTY  140 (484)
Q Consensus        77 ~~~~~~~~~~~~yG~vf~~~~~-~~---~~vvv~dp~~i~~vl-~~~~~~~~~~~-------~--~-~~-~~~g~~~~~~  140 (484)
                      .++..+.+|+++ ||||+++++ +.   ++|+++||+++++++ .+ ..|+.++.       .  . .. ...+.++++.
T Consensus        14 ~~~~~~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   91 (398)
T 1lfk_A           14 QGLDPADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDH-QQFSTRRRWDPRDEIGGKGIFRPRELVGNLMDY   91 (398)
T ss_dssp             ETTEECHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCT-TTEEECTTCCC-------------CCTTCGGGC
T ss_pred             CCCChhHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhC-cccccccccccccccCCcccccccccccCcccc
Confidence            445566778776 999999875 45   899999999999999 54 34554432       1  1 11 1235678888


Q ss_pred             CCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHH-HHHHHHHHHHhCCCccchh
Q 046539          141 EGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHIQA-LAADVISRTAFGSNYDDGR  219 (484)
Q Consensus       141 ~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~~~-~~~~~i~~~~fG~~~~~~~  219 (484)
                      +|+.|+++|+++.+.|++++++.+++.+.+.++++++.|.+      .+.++|+.+++.. ++.++++. +||.+.++.+
T Consensus        92 ~g~~~~~~R~~~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~------~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~  164 (398)
T 1lfk_A           92 DPPEHTRLRRKLTPGFTLRKMQRMAPYIEQIVNDRLDEMER------AGSPADLIAFVADKVPGAVLCE-LVGVPRDDRD  164 (398)
T ss_dssp             CTTHHHHHHHHHGGGGCHHHHHHHHHHHHHHHHHHHHHHHH------HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGGHH
T ss_pred             CCHHHHHHHHHHHhhhCHHHHHHHHHHHHHHHHHHHHHHHh------cCCCccHHHHHHHHHHHHHHHH-HcCCCHHHHH
Confidence            99999999999999999999999999999999999999974      2346999999886 88999997 6999876544


Q ss_pred             HHHHHHHHHHHHHHhhh-cc---cccchhHHHHHHh-ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcc
Q 046539          220 KIFELIREQSHLFIEVS-QF---DYIPGWREEALRI-GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAG  294 (484)
Q Consensus       220 ~~~~~~~~~~~~~~~~~-~~---~~~p~~~~~~~~~-~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG  294 (484)
                      ++......+........ ..   ..+-.+..+.++. .....+|+++.+++.. .      +.++++++.+++..+++||
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~~-~------~~l~~~el~~~~~~l~~AG  237 (398)
T 1lfk_A          165 MFMKLCHGHLDASLSQKRRAALGDKFSRYLLAMIARERKEPGEGMIGAVVAEY-G------DDATDEELRGFCVQVMLAG  237 (398)
T ss_dssp             HHHHHHHHTTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHH-G------GGSCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHhc-C------CCCCHHHHHHHHHHHHHHh
Confidence            44433332211000000 00   0000000111111 1123568999998754 1      2589999999999999999


Q ss_pred             cccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcc-cccccccccceecCE
Q 046539          295 QETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAY-LIFRTNVEETKLGDF  373 (484)
Q Consensus       295 ~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~-~~~R~~~~d~~i~g~  373 (484)
                      +|||+++++|++++|++||++|+++++|+                 .|++|||+|+||++|+++ .++|.+++|++++||
T Consensus       238 ~dTt~~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~  300 (398)
T 1lfk_A          238 DDNISGMIGLGVLAMLRHPEQIDAFRGDE-----------------QSAQRAVDELIRYLTVPYSPTPRIAREDLTLAGQ  300 (398)
T ss_dssp             SHHHHHHHHHHHHHHHHSGGGGGGGSSCH-----------------HHHHHHHHHHHHHHCCBSCCSCEEESSCEEETTE
T ss_pred             ccHHHHHHHHHHHHHHHCHHHHHHHHhCH-----------------HHHHHHHHHHHHhCcccccccceecCCCeeECCE
Confidence            99999999999999999999999999985                 379999999999999999 589999999999999


Q ss_pred             EeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhc
Q 046539          374 ILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNF  453 (484)
Q Consensus       374 ~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f  453 (484)
                      .||||+.|.++.+++||||++| +||++|+||||.           ..++|||.|+|.|+|++||++|++++++.|+++|
T Consensus       301 ~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f  368 (398)
T 1lfk_A          301 EIKKGDSVICSLPAANRDPALA-PDVDRLDVTREP-----------IPHVAFGHGVHHCLGAALARLELRTVFTELWRRF  368 (398)
T ss_dssp             EECTTCEEEECHHHHTTCTTTC-TTTTSCCTTSCC-----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             EECCCCEEEeChHHhCCCchhc-CCccccCCCCCC-----------CCCCCCCCCCCcCCCHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999 999999999983           3589999999999999999999999999999999


Q ss_pred             -EEEeCCCc-ccCCCCcceeccCCCcceee
Q 046539          454 -SFQLSPTY-VHAPSSGITVYPQHGAHMIL  481 (484)
Q Consensus       454 -~~~~~~~~-~~~~~~~~~~~~~~~~~v~~  481 (484)
                       ++++.+.. ......+...+....++|++
T Consensus       369 ~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  398 (398)
T 1lfk_A          369 PALRLADPAQDTEFRLTTPAYGLTELMVAW  398 (398)
T ss_dssp             TTCEESSTTCCCEEECSSSBCEEEECEEEC
T ss_pred             CCCEeCCCCCccccccCcCcCCcccceeeC
Confidence             79987432 22223344455555666653


No 70 
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00  E-value=1.3e-57  Score=434.60  Aligned_cols=341  Identities=22%  Similarity=0.278  Sum_probs=273.9

Q ss_pred             cchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCCcccCCCC-----Cc-c--cc--c---cccceeecCCcch
Q 046539           79 LPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHDIFQKPKG-----NS-L--GK--L---VVNGMVTYEGEQW  145 (484)
Q Consensus        79 ~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~-----~~-~--~~--~---~g~~~~~~~~~~~  145 (484)
                      +.++.++ ++||||+++  |  +.++++||+++++++.+++.|++++.     .. .  ..  +   .|.++++.+|+.|
T Consensus         2 ~~~~~~l-r~~Gpv~~~--g--~~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~h   76 (368)
T 1io7_A            2 YDWFSEM-RKKDPVYYD--G--NIWQVFSYRYTKEVLNNFSKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDPPLH   76 (368)
T ss_dssp             HHHHHHH-HHHCSEEEC--S--SCEEECSHHHHHHHHHCTTTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCCTTHH
T ss_pred             CHHHHHH-HhcCCeEeE--C--CEEEEecHHHHHHHHcCcccccccccccccccccccccccccccccccccccCCChHH
Confidence            4567777 599999876  4  58999999999999988666777653     11 1  12  1   2267888999999


Q ss_pred             hHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHH-HHHHHHHHHHHHhCCCccchhHHHHH
Q 046539          146 SKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHI-QALAADVISRTAFGSNYDDGRKIFEL  224 (484)
Q Consensus       146 ~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~  224 (484)
                      +++|+++.+.|++++++.+++.+.+.++++++.| +      .+ .+|+..++ ..+++++++.+ ||.+.++.+++...
T Consensus        77 ~~~R~~~~~~f~~~~~~~~~~~i~~~~~~l~~~l-~------~g-~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~~~~~~  147 (368)
T 1io7_A           77 DELRSMSADIFSPQKLQTLETFIRETTRSLLDSI-D------PR-EDDIVKKLAVPLPIIVISKI-LGLPIEDKEKFKEW  147 (368)
T ss_dssp             HHHHGGGTTTTCHHHHHHHHHHHHHHHHHHHHTC-C------TT-SEEHHHHTTTHHHHHHHHHH-HTCCGGGHHHHHHH
T ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHh-h------cC-CccHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHH
Confidence            9999999999999999999999999999999988 3      22 58999877 78999999998 99987654333222


Q ss_pred             HHHHHHHHHhhhcccccchhHHHH----------HHhccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcc
Q 046539          225 IREQSHLFIEVSQFDYIPGWREEA----------LRIGKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAG  294 (484)
Q Consensus       225 ~~~~~~~~~~~~~~~~~p~~~~~~----------~~~~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG  294 (484)
                      ...+..    ..   ..|...++.          ....-...+|+++.+++.          .++++++.+++..+++||
T Consensus       148 ~~~~~~----~~---~~p~~~~~~~~~~~~~~~~~~~~i~~~~d~l~~ll~~----------~l~~~ei~~~~~~l~~AG  210 (368)
T 1io7_A          148 SDLVAF----RL---GKPGEIFELGKKYLELIGYVKDHLNSGTEVVSRVVNS----------NLSDIEKLGYIILLLIAG  210 (368)
T ss_dssp             GGGCTT----SC---CCTTCHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHTS----------SCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHh----cc---CChHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHhc----------cCCHHHHHHHHHHHHHhh
Confidence            111111    00   013211000          000002345788877754          389999999999999999


Q ss_pred             cccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEE
Q 046539          295 QETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFI  374 (484)
Q Consensus       295 ~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~  374 (484)
                      +|||+++++|++++|++|| +|+++++|  +                |++|||+|+||++|+++.++|.+++|++++||.
T Consensus       211 ~dTt~~~l~~~l~~L~~~P-~~~~l~~E--~----------------~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~  271 (368)
T 1io7_A          211 NETTTNLISNSVIDFTRFN-LWQRIREE--N----------------LYLKAIEEALRYSPPVMRTVRKTKERVKLGDQT  271 (368)
T ss_dssp             HHHHHHHHHHHHHHHHHTT-CHHHHHHH--T----------------CHHHHHHHHHHHSCSBCCEEEEESSCEEETTEE
T ss_pred             hHHHHHHHHHHHHHHHhCh-HHHHHHhc--c----------------hHHHHHHHHHHhCcccccCceeeCCCeeECCEE
Confidence            9999999999999999999 99999998  1                689999999999999999899999999999999


Q ss_pred             eCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcE
Q 046539          375 LPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFS  454 (484)
Q Consensus       375 Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~  454 (484)
                      ||||+.|.++.+++||||++| +||++|+||||  +         ..++|||.|+|.|+|++||++|++++++.|+++|+
T Consensus       272 Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~--~---------~~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~  339 (368)
T 1io7_A          272 IEEGEYVRVWIASANRDEEVF-HDGEKFIPDRN--P---------NPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFR  339 (368)
T ss_dssp             ECTTCEEEECHHHHTTCTTTS-TTTTSCCTTCC--S---------CCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHTTCS
T ss_pred             ECCCCEEEecHhhhCCChhhC-CCcceeCCCCC--C---------CCCcCCCCCccCCCCHHHHHHHHHHHHHHHHHhCC
Confidence            999999999999999999999 99999999993  1         35899999999999999999999999999999996


Q ss_pred             -EEeCCCcccCCCCcceeccCCCcceeeecC
Q 046539          455 -FQLSPTYVHAPSSGITVYPQHGAHMILNKL  484 (484)
Q Consensus       455 -~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  484 (484)
                       +++++ ...  ..+.+.++..+++|+++||
T Consensus       340 ~~~~~~-~~~--~~~~~~~~~~~lpv~~~~r  367 (368)
T 1io7_A          340 HIEILD-TEK--VPNEVLNGYKRLVVRLKSN  367 (368)
T ss_dssp             EEEEEE-EEE--CCCSSBCCEEEEEEEEEC-
T ss_pred             CCEecC-cee--ccCCcccCCceeEEEeccC
Confidence             99875 222  3345567777899999987


No 71 
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00  E-value=1.1e-56  Score=427.61  Aligned_cols=336  Identities=20%  Similarity=0.225  Sum_probs=274.7

Q ss_pred             cchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCCcccCCCC-C--cc-----c-cccc----cceeecCCcch
Q 046539           79 LPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHDIFQKPKG-N--SL-----G-KLVV----NGMVTYEGEQW  145 (484)
Q Consensus        79 ~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~-~--~~-----~-~~~g----~~~~~~~~~~~  145 (484)
                      +..+.++ ++|||||+++ |   .++++||+++++++.+++.|++++. .  .+     . .+.|    .++++.+|+.|
T Consensus         2 ~~~~~~l-r~~gpv~~~~-g---~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h   76 (367)
T 3b4x_A            2 YDWFKQM-RKESPVYYDG-K---VWNLFKYEDCKMVLNDHKRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSDPPLH   76 (367)
T ss_dssp             HHHHHHH-HHHCSEEECS-S---SEEECSHHHHHHHHHCTTTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCCTTHH
T ss_pred             CHHHHHH-HHcCCceeeC-C---EEEEecHHHHHHHHcCchhhccCcccccccccccccccchhhcccccccccCCchhH
Confidence            4467777 5799999887 3   8999999999999987666776632 2  12     3 4555    67888999999


Q ss_pred             hHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHH-HHHHHHHHHHHHhCCCccchhHHHHH
Q 046539          146 SKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHI-QALAADVISRTAFGSNYDDGRKIFEL  224 (484)
Q Consensus       146 ~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~  224 (484)
                      +++|+++++.|++++++.  +.+.+.++++++.|.         +.+|+..++ ..+++++++. +||.+ ++.+++...
T Consensus        77 ~~~R~~~~~~fs~~~l~~--~~i~~~~~~l~~~l~---------g~~d~~~~~~~~~~~~vi~~-~~G~~-~~~~~~~~~  143 (367)
T 3b4x_A           77 DELRNLTADAFNPSNLPV--DFVREVTVKLLSELD---------EEFDVIESFAIPLPILVISK-MLGIN-PDVKKVKDW  143 (367)
T ss_dssp             HHHHHTTGGGGSGGGSCH--HHHHHHHHHHHHTCC---------SEEEHHHHTTTHHHHHHHHH-HHTCC-CCHHHHHHH
T ss_pred             HHHHHHHHHhcCHhhhcc--hHHHHHHHHHHHhcc---------CCcchHHHHHHhhHHHHHHH-HcCCC-CcHHHHHHH
Confidence            999999999999999887  999999999988874         148998766 7999999999 89998 654555544


Q ss_pred             HHHHHHHHHhhhcccccchhH-------------HHHHHh-ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHH
Q 046539          225 IREQSHLFIEVSQFDYIPGWR-------------EEALRI-GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLF  290 (484)
Q Consensus       225 ~~~~~~~~~~~~~~~~~p~~~-------------~~~~~~-~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~  290 (484)
                      ...+...+.      ..|.+.             .+.++. .....+|+++.+++.          .++++++.+++..+
T Consensus       144 ~~~~~~~~~------~~p~~~~~~~~~~~~~~~~~~~i~~r~~~~~~dll~~ll~~----------~ls~~el~~~~~~l  207 (367)
T 3b4x_A          144 SDLVALRLG------RADEIFSIGRKYLELISFSKKELDSRKGKEIVDLTGKIANS----------NLSELEKEGYFILL  207 (367)
T ss_dssp             HHHHHTTTT------STTGGGCCCHHHHHHHHHHHHHHHHHTTTCCSSHHHHHHTS----------SSCHHHHHHHHHHH
T ss_pred             HHHHHhccC------CChhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHhc----------cCCHHHHHHHHHHH
Confidence            444333211      122210             111221 122356888888765          38999999999999


Q ss_pred             HhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCccccccccccccee
Q 046539          291 YLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKL  370 (484)
Q Consensus       291 ~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i  370 (484)
                      ++||+|||+++++|++++|++ |++|+++++|++                   +|||+|+||++|+++.++|.+++|+++
T Consensus       208 ~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~-------------------~a~i~E~lRl~p~~~~~~R~~~~d~~l  267 (367)
T 3b4x_A          208 MIAGNETTTNLIGNAIEDFTL-YNSWDYVREKGA-------------------LKAVEEALRFSPPVMRTIRVTKEKVKI  267 (367)
T ss_dssp             HHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHCS-------------------HHHHHHHHHHSCSBCCEEEEESSCEEE
T ss_pred             HHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCCc-------------------hHHHHHHHHhcCcccCeeEEeCCCeEE
Confidence            999999999999999999999 999999999942                   899999999999999989999999999


Q ss_pred             cCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHH
Q 046539          371 GDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMIL  450 (484)
Q Consensus       371 ~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll  450 (484)
                      +||.||||+.|.++.+++||||++| +||++|+||||.           ..++|||.|+|.|+|++||++|++++++.|+
T Consensus       268 ~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~-----------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll  335 (367)
T 3b4x_A          268 RDQVIDEGELVRVWIASANRDEEVF-KDPDSFIPDRTP-----------NPHLSFGSGIHLCLGAPLARLEARIALEEFA  335 (367)
T ss_dssp             TTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCSS-----------CCCCTTCCSTTSCTTHHHHHHHHHHHHHHHH
T ss_pred             CCEEECCCCEEEEChhhhcCCcccC-CCccccCCCCCC-----------CCCcCCCCCCccCccHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999 999999999984           3589999999999999999999999999999


Q ss_pred             Hhc-EEEeCCCcccCCCCcceeccCCCcceeeec
Q 046539          451 QNF-SFQLSPTYVHAPSSGITVYPQHGAHMILNK  483 (484)
Q Consensus       451 ~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  483 (484)
                      ++| +++++++ ..  ..+.+.+...+++|++.+
T Consensus       336 ~~f~~~~l~~~-~~--~~~~~~~~~~~lpv~~~~  366 (367)
T 3b4x_A          336 KKFRVKEIVKK-EK--IDNEVLNGYRKLVVRVER  366 (367)
T ss_dssp             HHEEEEEEEEE-EE--CCCSSBCSEEEEEEEEEE
T ss_pred             HhCCCceeCCc-cc--cccccccCcceEEEEecC
Confidence            999 6998764 32  334556777789999875


No 72 
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00  E-value=1.5e-56  Score=430.73  Aligned_cols=352  Identities=16%  Similarity=0.200  Sum_probs=281.4

Q ss_pred             cccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCCcccCCCCCc-ccc--ccccceeecCCcchhHHHhhhc
Q 046539           77 RILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHDIFQKPKGNS-LGK--LVVNGMVTYEGEQWSKVRKIAN  153 (484)
Q Consensus        77 ~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~-~~~--~~g~~~~~~~~~~~~~~R~~~~  153 (484)
                      +|+.++.++++ +|||+++..|   .+++++++.+++++..+ .|+..+... ...  ..+++++..||+.|+++|+++.
T Consensus        21 dp~~~~~~lr~-~~pv~~~~~g---~~~v~~~~~v~~~l~d~-~fs~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~   95 (394)
T 2wiy_A           21 NPYPWYRRLQQ-DHPVHKLEDG---TYLVSRYADVSHFAKLP-IMSVEPGWADAGPWAVASDTALGSDPPHHTVLRRQTN   95 (394)
T ss_dssp             CCHHHHHHHHH-HCSEEECTTS---CEEECCHHHHHHHTTST-TEECHHHHHTCGGGGGGGGSGGGCCTTHHHHHHHHHH
T ss_pred             CccHHHHHHHh-cCCeEEecCC---eEEEcCHHHHHHHHcCC-CccccccccccccchhcccccccCCchHHHHHHHHHH
Confidence            67888988865 5899876643   79999999999999764 344322111 111  2245688899999999999999


Q ss_pred             cCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHHHHHHHHHHHHHHhCCCccchhHHHHHHHHHHHHHH
Q 046539          154 PAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHIQALAADVISRTAFGSNYDDGRKIFELIREQSHLFI  233 (484)
Q Consensus       154 ~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~  233 (484)
                      +.|+++.++.+++.+++.++++++.|.       .++.+|+...+..++.++++..+||.+.++.+++.....+...   
T Consensus        96 ~~fs~~~~~~~~~~i~~~~~~l~~~~~-------~~~~~d~~~~~~~~~~~vi~~~~~G~~~~~~~~~~~~~~~~~~---  165 (394)
T 2wiy_A           96 KWFTPKLVDGWVRTTRELVGDLLDGVE-------AGQVIEARRDLAVVPTHVTMARVLQLPEDDADAVMEAMFEAML---  165 (394)
T ss_dssp             TTCSHHHHHHHTHHHHHHHHHHHHTCC-------TTCCEEHHHHHTHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHG---
T ss_pred             hccCHHHHHHHHHHHHHHHHHHHHHHh-------ccCCeeHHHHHHhhhHHHHHHHHcCCCHhHHHHHHHHHHHHHH---
Confidence            999999999999999999999998875       3347999999999999999999999976654444433322111   


Q ss_pred             hhhcccccch---hH-------------HHHHHh-ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccc
Q 046539          234 EVSQFDYIPG---WR-------------EEALRI-GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQE  296 (484)
Q Consensus       234 ~~~~~~~~p~---~~-------------~~~~~~-~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~  296 (484)
                      ..   ...|.   ..             .+.++. .....+|+++.|++...      ++.++++|+.+++..+++||+|
T Consensus       166 ~~---~~~p~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~~~dll~~Ll~~~~------~~~ls~~el~~~~~~l~~AG~e  236 (394)
T 2wiy_A          166 MQ---SAEPADGDVDRAAVAFGYLSARVAEMLEDKRVNPGDGLADSLLDAAR------AGEITESEAIATILVFYAVGHM  236 (394)
T ss_dssp             GG---SSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHH------TTSSCHHHHHHHHHHHHHHTTT
T ss_pred             hc---cCCccchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHhhh------cCCCCHHHHHHHHHHHHHhhhh
Confidence            00   01111   00             111111 12235689998887542      1358999999999999999999


Q ss_pred             cHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeC
Q 046539          297 TTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILP  376 (484)
Q Consensus       297 tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip  376 (484)
                      ||+++++|++++|++||++|+++++|+                 +|+++||+|+||++||++.++|.+++|++++||.||
T Consensus       237 TTa~~l~~~l~~L~~~P~~~~~l~~e~-----------------~~l~a~i~E~LRl~pp~~~~~R~~~~d~~l~G~~Ip  299 (394)
T 2wiy_A          237 AIGYLIASGIELFARRPEVFTAFRNDE-----------------SARAAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIE  299 (394)
T ss_dssp             HHHHHHHHHHHHHHHCHHHHHHHHHCG-----------------GGHHHHHHHHHHHSCSBCEEEEEESSCEEETTEEEC
T ss_pred             hHHHHHHHHHHHHHHCHHHHHHHHhCh-----------------HhHHHHHHHHHhhCCCccCeeEEECCCEEEcCeecC
Confidence            999999999999999999999999873                 689999999999999999889999999999999999


Q ss_pred             CCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcE-E
Q 046539          377 PGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFS-F  455 (484)
Q Consensus       377 ~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~-~  455 (484)
                      ||+.|.++.+++||||++| +||++|+|+||++.         ..++|||.|+|.|+|++||++|++++++.|+++|+ +
T Consensus       300 ~G~~V~~~~~~~~rdp~~~-~dP~~F~p~R~~~~---------~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~~~~~  369 (394)
T 2wiy_A          300 AGSPIRFMIGAANRDPEVF-DDPDVFDHTRPPAA---------SRNLSFGLGPHSCAGQIISRAEATTVFAVLAERYERI  369 (394)
T ss_dssp             TTCCEEEEHHHHTTCTTTS-SSTTSCCTTCCGGG---------SCCSTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCSCE
T ss_pred             CCCEEEeChHhhcCCcccC-CCccccCCCCCCCC---------CCccCCCCCCCcCCcHHHHHHHHHHHHHHHHHhCCCc
Confidence            9999999999999999999 99999999999742         36899999999999999999999999999999998 9


Q ss_pred             EeCCCcccCCCCcceeccCCCcceee
Q 046539          456 QLSPTYVHAPSSGITVYPQHGAHMIL  481 (484)
Q Consensus       456 ~~~~~~~~~~~~~~~~~~~~~~~v~~  481 (484)
                      +++++...  ..+...+....++|++
T Consensus       370 ~l~~~~~~--~~~~~~~g~~~lpv~~  393 (394)
T 2wiy_A          370 ELAEEPTV--AHNDFARRYRKLPIVL  393 (394)
T ss_dssp             EESSCCEE--CCCSSBCCEEECEEEE
T ss_pred             eECCCCcc--cccccccCcceeeEEe
Confidence            99864332  3344466667788876


No 73 
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00  E-value=2e-56  Score=433.04  Aligned_cols=359  Identities=17%  Similarity=0.200  Sum_probs=283.7

Q ss_pred             CCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCCcccCCCC----------CccccccccceeecC
Q 046539           72 DDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHDIFQKPKG----------NSLGKLVVNGMVTYE  141 (484)
Q Consensus        72 ~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~----------~~~~~~~g~~~~~~~  141 (484)
                      ++...+|+.+  ++.++|||++.+++++.. ++|+++++++++++++. ++....          .......+.+++..+
T Consensus        29 ~~~~~~P~~~--~~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d  104 (416)
T 3p3o_A           29 FTDPNFSWDS--PEVAEAREKSWIARTPLA-LLVLRYAEADQLARDKR-LISGFRGLVDMVGTPEGPVRDFMVDFLQSLD  104 (416)
T ss_dssp             TTSTTCCTTS--HHHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTT-EECSHHHHHHHHTCCSSHHHHHHHHSGGGCC
T ss_pred             cccccCCchH--HHHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcc-cccCCccccccccccccchhhhhcCccccCC
Confidence            4445678888  455689999999998776 99999999999998765 322211          012223456788899


Q ss_pred             CcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHH-HHHHHHHHHHHHhCCCccchhH
Q 046539          142 GEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHI-QALAADVISRTAFGSNYDDGRK  220 (484)
Q Consensus       142 ~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~  220 (484)
                      |+.|+++|+++++.|++++++.+.+.+.+.++++++.| +      ++ .+|+...+ ..+++++++. +||.+.++.+.
T Consensus       105 g~~h~~~Rr~~~~~fs~~~l~~~~~~i~~~~~~ll~~l-~------~g-~~d~~~~~~~~~~~~vi~~-l~G~~~~~~~~  175 (416)
T 3p3o_A          105 GADHRRLRGLATHPFTPRRITAVQPFVRSTVEQLIDKL-P------QG-DFDFVQHFPHPLPALVMCQ-LLGFPLEDYDT  175 (416)
T ss_dssp             HHHHHHHHHTTCGGGSHHHHHHHHHHHHHHHHHHHHTC-C------SS-SEEHHHHTTTHHHHHHHHH-HHTCCGGGHHH
T ss_pred             chHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhh-c------cC-CccHHHHHHHHHHHHHHHH-HhCCCHHHHHH
Confidence            99999999999999999999999999999999999988 2      22 48876665 5699999998 68987665544


Q ss_pred             HHHHHHHHHHHHHhhhcccccch-hH-------------HHHHH-hccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHH
Q 046539          221 IFELIREQSHLFIEVSQFDYIPG-WR-------------EEALR-IGKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIE  285 (484)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~p~-~~-------------~~~~~-~~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~  285 (484)
                      +..+...+...+...    ..+. ..             .+.++ ......+|+++.|++...+     + .++++++.+
T Consensus       176 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~~~dll~~ll~~~~~-----~-~ls~~el~~  245 (416)
T 3p3o_A          176 VGRLSIETNLGLALS----NDQDILVKVEQGLGRMFDYLVAAIEKRKVEPGDDLTSDIVRAFHD-----G-VLDDYELRT  245 (416)
T ss_dssp             HHHHHHTTCGGGTTC----SCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHT-----T-SSCHHHHHH
T ss_pred             HHHHHHHHHhhcccc----cchhhHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHhhcc-----C-CCCHHHHHH
Confidence            444333332211100    0000 00             11111 1223567899999876432     2 699999999


Q ss_pred             HHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcc-cccccc
Q 046539          286 ECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAY-LIFRTN  364 (484)
Q Consensus       286 ~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~-~~~R~~  364 (484)
                      ++..+++||+|||+++++|++++|++||++|+++++|+                 .|+++||+|+||++|+++ .++|.+
T Consensus       246 ~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~-----------------~~l~a~i~E~lRl~p~~~~~~~R~~  308 (416)
T 3p3o_A          246 LVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENP-----------------ELAPQAVEEVLRWSPTLPVTATRVA  308 (416)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG-----------------GGHHHHHHHHHHHSCSCSSCCEEEE
T ss_pred             HHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCH-----------------HHHHHHHHHHHhhccccccCcceEe
Confidence            99999999999999999999999999999999999984                 489999999999999994 589999


Q ss_pred             cccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHH
Q 046539          365 VEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKL  444 (484)
Q Consensus       365 ~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~  444 (484)
                      ++|++++||.||||+.|.++.+++||||++| +||++|+|+||..          ..++|||.|+|.|+|++||++|+++
T Consensus       309 ~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~-~dp~~F~p~R~~~----------~~~l~FG~G~r~C~G~~lA~~e~~~  377 (416)
T 3p3o_A          309 AEDFEVNGVRIPTGTPVFMCAHVAHRDPRVF-ADADRFDITVKRE----------APSIAFGGGPHFCLGTALARLELTE  377 (416)
T ss_dssp             SSCEEETTEEECTTCEEEECHHHHTTCTTTC-TTTTSCCTTCCCS----------SCCCTTCCSTTSCTTHHHHHHHHHH
T ss_pred             CCCeEECCEEECCCCEEEEChHHhcCChhcc-CCccccCCCCCCC----------CCeecCCCCCccCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999 9999999999742          4589999999999999999999999


Q ss_pred             HHHHHHHhcE-EEeCCCcccCCCCcceeccCCCcceeeec
Q 046539          445 ALAMILQNFS-FQLSPTYVHAPSSGITVYPQHGAHMILNK  483 (484)
Q Consensus       445 ~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  483 (484)
                      +++.|+++|+ ++++++...  ..+...+....++|++.|
T Consensus       378 ~l~~ll~~f~~~~l~~~~~~--~~~~~~~g~~~lpv~~~p  415 (416)
T 3p3o_A          378 AVAALATRLDPPQIAGEITW--RHELGVAGPDALPLRFGA  415 (416)
T ss_dssp             HHHHHHHHSCCEEECSCCEE--CCCTTCCCEEECEEEESC
T ss_pred             HHHHHHHhCCccccCCCCce--ecCCCccCcceeeEEEec
Confidence            9999999995 888765433  333445555678898876


No 74 
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00  E-value=7.7e-56  Score=427.83  Aligned_cols=361  Identities=15%  Similarity=0.189  Sum_probs=278.4

Q ss_pred             ccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCCcccCCCCCcc------cc-ccccceeecCCcchhHH
Q 046539           76 PRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKHDIFQKPKGNSL------GK-LVVNGMVTYEGEQWSKV  148 (484)
Q Consensus        76 ~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~~------~~-~~g~~~~~~~~~~~~~~  148 (484)
                      .||+.++++++ ++|||+  +..+...++|+++++++++|+++..|+.......      .. ..+..+++.||+.|+++
T Consensus        34 ~dP~~~~~~lR-~~gPV~--~~~~~~~~~vt~~~~v~~vl~d~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~Dg~~H~r~  110 (412)
T 4dnj_A           34 ADPYPEQETLR-EAGPVV--YLDKWNVYGVARYAEVYAVLNDPLTFCSSRGVGLSDFKKEKPWRPPSLILEADPPAHTRT  110 (412)
T ss_dssp             HSCHHHHHHHH-HHCSSE--EETTTTEEEECSHHHHHHHHTCTTTEESTTCSSSSCTTTSCCSSCCCTTTTCCTTHHHHH
T ss_pred             hCcHHHHHHHH-hcCCEE--EECCCCEEEECCHHHHHHHHcCCccccCCCccccccccccccccCCCccccCChHHHHHH
Confidence            48899999886 479986  5566679999999999999988776654432211      11 12334778899999999


Q ss_pred             HhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchH-HHHHHHHHHHHHHHHhCCCccchhHHHHHHHH
Q 046539          149 RKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIW-PHIQALAADVISRTAFGSNYDDGRKIFELIRE  227 (484)
Q Consensus       149 R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~-~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~  227 (484)
                      |+++++.|++++++++++.|.+.++++++.+..      .++.+|+. +....+..++++. ++|......+....+...
T Consensus       111 R~~~~~~Fs~~~l~~~~~~i~~~~~~l~~~~~~------~~~~~D~v~~~~~~~~~~~i~~-l~g~~~~~~~~~~~~~~~  183 (412)
T 4dnj_A          111 RAVLSKVLSPATMKRLRDGFAAAADAKIDELLA------RGGNIDAIADLAEAYPLSVFPD-AMGLKQEGRENLLPYAGL  183 (412)
T ss_dssp             HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHH------TTSEEETCCCCCCHHHHHHHHH-HHTCCSTTGGGHHHHHHH
T ss_pred             HhhcccccCHHHHHHhhHHHHHHHHHHHHhhhc------cCCCceeHHHHHhhhhHhHHHH-HcCCchhhhhhhhhhhhc
Confidence            999999999999999999999999999998865      33456653 4445677888877 566655444444443333


Q ss_pred             HHHHHHhhhcc-----cccchhH---HHHHHhccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHH
Q 046539          228 QSHLFIEVSQF-----DYIPGWR---EEALRIGKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTA  299 (484)
Q Consensus       228 ~~~~~~~~~~~-----~~~p~~~---~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~  299 (484)
                      +..........     ...-...   .+..+... ...+.+..++....+     +..++++|+.+++..+++||+|||+
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~-----~~~l~~~e~~~~~~~l~~AG~eTTa  257 (412)
T 4dnj_A          184 VFNAFGPPNELRQSAIERSAPHQAYVAEQCQRPN-LAPGGFGACIHAFSD-----TGEITPEEAPLLVRSLLSAGLDTTV  257 (412)
T ss_dssp             HHHHTSCSSHHHHHHHHTCHHHHHHHHHHTSGGG-SCTTSHHHHHHHTTT-----TTSSCTTHHHHHHHHHHHHSSHHHH
T ss_pred             ccccccccHHHHHHHHHHHHHHHHHHHHHHHhhc-cccccchhhhHhhhh-----ccchhHHHHHHHHHHHHhccchhHH
Confidence            32221100000     0000000   11111222 334455555544332     3469999999999999999999999


Q ss_pred             HHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEEeCCCC
Q 046539          300 SLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFILPPGV  379 (484)
Q Consensus       300 ~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~  379 (484)
                      ++++|++++|++||++|+++++|                 ..++.++++|++|++|+++.+.|.+++|++++||.||||+
T Consensus       258 ~~l~~~~~~L~~~P~~~~~Lr~~-----------------~~~~~~~~eE~lR~~pp~~~~~R~a~~d~~l~G~~Ip~G~  320 (412)
T 4dnj_A          258 NGIAAAVYCLARFPDEFARLRAD-----------------PSLARNAFEEAVRFESPVQTFFRTTTRDVELAGATIGEGE  320 (412)
T ss_dssp             HHHHHHHHHHHHCHHHHHHHHHC-----------------GGGHHHHHHHHHHHHCSBCEEEEEESSCEEETTEEECTTC
T ss_pred             HHHHHHHHHHhhCHHHHHHHHhC-----------------ccccccccceeeeecCCcccccccCCCCeEECCccCCCCC
Confidence            99999999999999999999986                 4788999999999999999999999999999999999999


Q ss_pred             eEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhc-EEEeC
Q 046539          380 LLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNF-SFQLS  458 (484)
Q Consensus       380 ~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~  458 (484)
                      .|.++.+++||||++| +||++|+||||.           ..|+|||.|+|.|+|++||++|++++++.|+++| +++++
T Consensus       321 ~V~~~~~a~~rDp~~f-~dP~~F~PeR~~-----------~~~lpFG~G~r~CiG~~lA~~E~~~~l~~Ll~rf~~~~l~  388 (412)
T 4dnj_A          321 KVLMFLGSANRDPRRW-DDPDRYDITRKT-----------SGHVGFGSGVHMCVGQLVARLEGEVVLAALARKVAAIEIA  388 (412)
T ss_dssp             EEEEEHHHHTTCTTTS-SSTTSCCTTSCC-----------TTCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEEC
T ss_pred             eEEeehhhccCChhhC-CCccccCCCCCC-----------CCCCCcCCCCcCChhHHHHHHHHHHHHHHHHHHCCCCeEC
Confidence            9999999999999999 999999999973           4589999999999999999999999999999999 89987


Q ss_pred             CCcccCCCCcceeccCCCcceeeec
Q 046539          459 PTYVHAPSSGITVYPQHGAHMILNK  483 (484)
Q Consensus       459 ~~~~~~~~~~~~~~~~~~~~v~~~~  483 (484)
                      +....  ..+.++++..+++|+|+|
T Consensus       389 ~~~~~--~~~~~~rg~~~LpV~~tP  411 (412)
T 4dnj_A          389 GPLKR--RFNNTLRGLESLPIQLTP  411 (412)
T ss_dssp             SCCEE--EECSSBEEEEECEEEEEE
T ss_pred             CCCee--ecCCCccCCcceeEEEEe
Confidence            65333  335567777889999987


No 75 
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00  E-value=2.4e-56  Score=421.58  Aligned_cols=328  Identities=19%  Similarity=0.259  Sum_probs=260.8

Q ss_pred             HHhCCceEEeeCCcCeEEeCCHHHHHHHHhhCCcccCCCC-CccccccccceeecCCcchhHHHhhhccCCChHHHhhhH
Q 046539           87 SKYGKKSFKWMGPRPSINVQDPKLIREILLKHDIFQKPKG-NSLGKLVVNGMVTYEGEQWSKVRKIANPAFHQDKLKDML  165 (484)
Q Consensus        87 ~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~  165 (484)
                      ++||||+++  |   .++++||+++++++.+++.|++++. ..... .+.++++.+|+.|+++|+++++.|+++++++++
T Consensus         2 r~~gpv~~~--g---~~vv~~~~~v~~vl~~~~~f~~~~~~~~~~~-~~~~l~~~~g~~~~~~R~~~~~~fs~~~l~~~~   75 (343)
T 2rfb_A            2 RLNDPVHYD--G---AWHVYKYSDVKHVLMNDKIFSSNPGNRYSNA-GGISFITMDNPEHKEFRDISAPYFLPSKINDYK   75 (343)
T ss_dssp             -CCCCEEET--T---EEEECSHHHHHHHHHCTTTEESSCSSCCC----CCGGGGCCHHHHHHHHHHHHHHHSHHHHGGGH
T ss_pred             CCcCCeeee--C---eEEEcCHHHHHHHHhChhhcccCCcCCCCCc-cccccccCCchHHHHHHHHhhhhcCHHHHHHHH
Confidence            579999876  2   8999999999999988666776652 22222 356788889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCcccchHHHH-HHHHHHHHHHHHhCCCccchhHHHHHHHHHHHHHHhhhcccccchh
Q 046539          166 PKMYLSCNHMIRKLFEIAASDEESFELDIWPHI-QALAADVISRTAFGSNYDDGRKIFELIREQSHLFIEVSQFDYIPGW  244 (484)
Q Consensus       166 ~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  244 (484)
                      +.+.+.++++++.|.          .+|+..++ ..+++++++.+ ||.+.++.+++......+...        ..|.+
T Consensus        76 ~~i~~~~~~l~~~l~----------~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~~~~~~~~~~~~~--------~~p~~  136 (343)
T 2rfb_A           76 DFIEETSNDLIKNID----------NKDIISEYAVRLPVNIISKI-LGIPDSDMPLFKLWSDYIIGN--------KRDEN  136 (343)
T ss_dssp             HHHHHHHHHHHTTCT----------TSCHHHHTTTHHHHHHHHHH-HTCCGGGHHHHHHHHHHHHTS--------CCSSH
T ss_pred             HHHHHHHHHHHHhcc----------ccCHHHHHhhhhhHHHHHHH-cCCCHHHHHHHHHHHHHHhhc--------cCcch
Confidence            999999999998764          47888866 89999999998 999876544444443332211        11322


Q ss_pred             H--HHH--H----Hh-ccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHH
Q 046539          245 R--EEA--L----RI-GKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIW  315 (484)
Q Consensus       245 ~--~~~--~----~~-~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~  315 (484)
                      .  .+.  .    +. .+.-.+| ++.+++...+     +..++++++.+++..+++||+|||+++++|++++|++||++
T Consensus       137 ~~~~~~~~~~~~~~~~~~~i~~d-l~~ll~~~~~-----~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~  210 (343)
T 2rfb_A          137 FNYVNNRMVSRLLEIFKSDSHGI-INVLAGSSLK-----NRKLTMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDI  210 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCSSH-HHHHHTCBCS-----SSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcc-HHHHHhhhcC-----CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHH
Confidence            1  000  0    00 0001346 7777765321     23589999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCc-ccccccccccceecCEEeCCCCeEEechhhhhcCCCC
Q 046539          316 QERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPA-YLIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEY  394 (484)
Q Consensus       316 ~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~-~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~  394 (484)
                      |+++++|+                    +|||+|+||++|++ +.++|.+++|++++||.||||+.|.++.+++||||++
T Consensus       211 ~~~l~~E~--------------------~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~  270 (343)
T 2rfb_A          211 IDDALKNR--------------------SGFVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETF  270 (343)
T ss_dssp             HHHHHHCH--------------------HHHHHHHHHHSCSBCCBCCCEESSCEEETTEEECTTCEEEECHHHHTTCTTT
T ss_pred             HHHHHcCc--------------------HHHHHHHHhhCcccccccceEECCCeEECCEEECCCCEEEEChhhhCCCccc
Confidence            99999984                    89999999999999 9899999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhcE-EEeCCCcccCCCCcceecc
Q 046539          395 WGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNFS-FQLSPTYVHAPSSGITVYP  473 (484)
Q Consensus       395 ~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~~  473 (484)
                      | +||++|+||||            ..++|||.|+|.|+|++||++|++++++.|+++|+ ++++++.+ ....+...+.
T Consensus       271 ~-~dp~~F~PeR~------------~~~~~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~-~~~~~~~~~~  336 (343)
T 2rfb_A          271 F-DEPDLFKIGRR------------EMHLAFGIGIHMCLGAPLARLEASIALNDILNHFKRIKIDYKKS-RLLDNKMVLG  336 (343)
T ss_dssp             S-SSTTSCCTTCS------------SCCCTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCSCCCBCTTTC-EECSCTTBCC
T ss_pred             C-CCccccCCCCC------------CCCccCCCCCccCCChHHHHHHHHHHHHHHHHhCCCceeCCCcc-ccccCcCcCC
Confidence            9 99999999994            24799999999999999999999999999999996 99887433 2233333444


Q ss_pred             CCCcce
Q 046539          474 QHGAHM  479 (484)
Q Consensus       474 ~~~~~v  479 (484)
                      ...++|
T Consensus       337 ~~~lpv  342 (343)
T 2rfb_A          337 YDKLFL  342 (343)
T ss_dssp             EEECCB
T ss_pred             cccccc
Confidence            444544


No 76 
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00  E-value=2.7e-50  Score=388.10  Aligned_cols=356  Identities=16%  Similarity=0.148  Sum_probs=269.1

Q ss_pred             ccccchHHHHHHHhC-CceEEeeCCcCeEEeCCHHHHHHHHhhCCcccCCCCCc---cccccccceeecCCcchhHHHhh
Q 046539           76 PRILPYHHHIISKYG-KKSFKWMGPRPSINVQDPKLIREILLKHDIFQKPKGNS---LGKLVVNGMVTYEGEQWSKVRKI  151 (484)
Q Consensus        76 ~~~~~~~~~~~~~yG-~vf~~~~~~~~~vvv~dp~~i~~vl~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~R~~  151 (484)
                      .+|+..+.++++..+ +++....++ ..++|++++++++++++++.|+......   ........++..|++.|+++|++
T Consensus        37 ~~~~~~~~~lr~~~~~~~~~~~~~g-g~W~vtr~~dv~~vl~d~~~fs~~~~~~~~~~~~~~~~~~~~~D~p~H~r~Rrl  115 (417)
T 4dxy_A           37 DGYHEAWKKVQHPGIPDLIWTPFTG-GHWIATNGDTVKEVYSDPTRFSSEVIFLPKEAGEKAQMVPTKMDPPEHTPYRKA  115 (417)
T ss_dssp             GCHHHHHHHHSCTTCCSEEEESSTT-SEEEECSHHHHHHHHTCTTTEESSCCSSSTTSSCSSCTTTTTCCTTTHHHHHHH
T ss_pred             cChHHHHHHHHhhCCCCEEecCCCC-CEEEECCHHHHHHHHcCchhccCCCcccccccccccccCcccCCcHHHHHHHHH
Confidence            367777887766554 344333333 4899999999999998877777654321   12222333567899999999999


Q ss_pred             hccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCCcccchHHHHH-HHHHHHHHHHHhCCCccchhHHHHHHHHHHH
Q 046539          152 ANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEESFELDIWPHIQ-ALAADVISRTAFGSNYDDGRKIFELIREQSH  230 (484)
Q Consensus       152 ~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~vdl~~~~~-~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~  230 (484)
                      +++.|++++++.+++.|++.++++++.+.       ..+++|+...+. .+...+++. ++|...++...+..+...+..
T Consensus       116 l~~~Fs~~~l~~~~~~i~~~~~~lld~l~-------~~g~~D~v~~~a~~l~~~vi~~-llg~~~~d~~~~~~~~~~~~~  187 (417)
T 4dxy_A          116 LDKGLNLAKIRKVEDKVREVASSLIDSFA-------ARGECDFAAEYAELFPVHVFMA-LADLPLEDIPVLSEYARQMTR  187 (417)
T ss_dssp             HHHHHCHHHHHTTHHHHHHHHHHHHHHHH-------TTSEEEHHHHTTTTHHHHHHHH-HTTCCGGGHHHHHHHHHHHHS
T ss_pred             hhhhcCHHHHHHHHHHHHHHHHHHHHHhh-------hcCCeeeHHHHHhhhHHHHHHH-HcCCCHHHHHHHHhhhhhhcc
Confidence            99999999999999999999999999887       334688766654 556666665 788876655444444333221


Q ss_pred             HHHhhhcccccchh---------------HHHHHH-hccCCchhHHHHHHHhhhHhhHHhhcCCCHHHHHHHHHHHHhcc
Q 046539          231 LFIEVSQFDYIPGW---------------REEALR-IGKASNDDLLGLLMESNYKEIQEKEAGMSIEEVIEECKLFYLAG  294 (484)
Q Consensus       231 ~~~~~~~~~~~p~~---------------~~~~~~-~~~~~~~~~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~aG  294 (484)
                      ..      ...|..               ....++ ......+|+++.|+....+     +..++++++.+++..+++||
T Consensus       188 ~~------~~~~~~~~~~~~~~~~~~~~~~~~li~~rr~~~~ddl~s~L~~~~~~-----~~~~~~~e~~~~~~~ll~AG  256 (417)
T 4dxy_A          188 PE------GNTPEEMATDLEAGNNGFYAYVDPIIRARVGGDGDDLITLMVNSEIN-----GERIAHDKAQGLISLLLLGG  256 (417)
T ss_dssp             CC------CSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHTCEET-----TEECCHHHHHHHHHHHHHHT
T ss_pred             cc------ccChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhcccccc-----CCccchhHHHHHHHHHHhhc
Confidence            10      011110               011122 2233567888888866433     35689999999999999999


Q ss_pred             cccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHHHhhcCCCCcccccccccccceecCEE
Q 046539          295 QETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIYEVFRIYSPAYLIFRTNVEETKLGDFI  374 (484)
Q Consensus       295 ~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~  374 (484)
                      +|||+++++|++++|++||++|+++++|...                  .....|.+|++++++.+.|.+++|++++|+.
T Consensus       257 ~eTTa~~l~~~~~~L~~~P~~~~~l~~e~~~------------------~~~avee~~~~~~~~~~~R~a~~d~~l~G~~  318 (417)
T 4dxy_A          257 LDTVVNFLSFFMIHLARHPELVAELRSDPLK------------------LMRGAEEMFRRFPVVSEARMVAKDQEYKGVF  318 (417)
T ss_dssp             THHHHHHHHHHHHHHHTCHHHHHHHHHCHHH------------------HHHTHHHHHHHSCCBEEEEEECSCEEETTEE
T ss_pred             ccchhhHHHHHHHHHHhCchhhhhhccCccc------------------cccceeeeeccccccccccccccceEecCcc
Confidence            9999999999999999999999999998433                  3334455555666667889999999999999


Q ss_pred             eCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCCCCCccchHHHHHHHHHHHHHHHHhc-
Q 046539          375 LPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGGPRICIGQNFALMEVKLALAMILQNF-  453 (484)
Q Consensus       375 Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G~r~C~G~~la~~~~~~~l~~ll~~f-  453 (484)
                      ||+|+.|.++.+++||||++| +||++|+|+|+          + ..|+|||.|+|.|+|++||++|++++++.|+++| 
T Consensus       319 Ip~G~~V~~~~~a~~rDp~~f-~dP~~FdpeR~----------~-~~~l~FG~G~r~ClG~~LA~~E~~i~l~~Ll~rfp  386 (417)
T 4dxy_A          319 LKRGDMILLPTALHGLDDAAN-PEPWKLDFSRR----------S-ISHSTFGGGPHRCAGMHLARMEVIVTLEEWLKRIP  386 (417)
T ss_dssp             ECTTCEEEEETHHHHTCTTTS-SSTTSCCTTCS----------C-CCCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHCS
T ss_pred             ccCCCEEEEeehhhcCChhhC-CCccccCCCCC----------C-CCCCCcCCCcccCccHHHHHHHHHHHHHHHHHhCC
Confidence            999999999999999999999 99999999992          1 5689999999999999999999999999999999 


Q ss_pred             EEEeCCCcccCCCCcceeccCCCcceeee
Q 046539          454 SFQLSPTYVHAPSSGITVYPQHGAHMILN  482 (484)
Q Consensus       454 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  482 (484)
                      +++++++... ...+.+++....++|+|-
T Consensus       387 ~~~l~~~~~~-~~~~~~~~g~~~LPv~~~  414 (417)
T 4dxy_A          387 EFSFKEGETP-IYHSGIVAAVENVPLVWP  414 (417)
T ss_dssp             SCEECTTCCC-EEECSSBCEEECCEEECC
T ss_pred             CceeCCCCCe-eecCCcccCceeeeEEee
Confidence            8999876433 233444555567888874


No 77 
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00  E-value=7.4e-49  Score=369.65  Aligned_cols=335  Identities=14%  Similarity=0.101  Sum_probs=234.5

Q ss_pred             CCCC-CCCCCCCCCHHHHHHHHHhhccCCCCCCCCccccccchHHHHHHHhCCceEEeeCCcCeEEeCCHHHHHHHHhhC
Q 046539           40 GFSG-NSYKIFHGDTKDMSMMLKEAKARPISLSDDIVPRILPYHHHIISKYGKKSFKWMGPRPSINVQDPKLIREILLKH  118 (484)
Q Consensus        40 ~~Pg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~vf~~~~~~~~~vvv~dp~~i~~vl~~~  118 (484)
                      .+|| ++++|++|+...+..             ..+..+|+.++.+++++  ||+++.   .+.++++++++++++++++
T Consensus        35 ~ppG~~~~~P~~G~~~~~~~-------------~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d~   96 (381)
T 2yjn_B           35 MIRGLHWGYGSNGDPYPMLL-------------CGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDDP   96 (381)
T ss_dssp             HHHHHHHHHHHHTCHHHHHH-------------HTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHCS
T ss_pred             CCCcccccccccCCchhhcC-------------chhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcCC
Confidence            4567 457899998766543             11234788899999866  988654   3589999999999999874


Q ss_pred             CcccCCCCCc--c-------ccccccceeecCCcchhHHHhhhccCCChHHHhhhHHHHHHHHHHHHHHHHHHHhcCCCC
Q 046539          119 DIFQKPKGNS--L-------GKLVVNGMVTYEGEQWSKVRKIANPAFHQDKLKDMLPKMYLSCNHMIRKLFEIAASDEES  189 (484)
Q Consensus       119 ~~~~~~~~~~--~-------~~~~g~~~~~~~~~~~~~~R~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~  189 (484)
                       .|++.....  .       ...++.++++.|++.|       .+.|+     . ++.|++.++++++.|.         
T Consensus        97 -~f~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~H-------~~~Ft-----~-~~~i~~~~~~ll~~~~---------  153 (381)
T 2yjn_B           97 -AFTRATGRTPEWMRAAGAPPAEWAQPFRDVHAASW-------EGEVP-----D-VGELAESFAGLLPGAG---------  153 (381)
T ss_dssp             -SEESSCCCCCHHHHHHTCCHHHHTHHHHHHHHCCC-------CSCCC-----C-CSCHHHHTSTTSCC-----------
T ss_pred             -CcCCCcccccccccccccccchhhhhhhhCCchhh-------hhccC-----C-hHHHHHHHHHHHHhcc---------
Confidence             566553211  0       1112456777899999       67787     3 7788888888888875         


Q ss_pred             cccchHHHH-HHHHHHHHHHHHhCCCccchhHHHHHHHHHHHHHHhhhcccccchhHHHHHHhccCCchhHHHHHHHhhh
Q 046539          190 FELDIWPHI-QALAADVISRTAFGSNYDDGRKIFELIREQSHLFIEVSQFDYIPGWREEALRIGKASNDDLLGLLMESNY  268 (484)
Q Consensus       190 ~~vdl~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~l~~ll~~~~  268 (484)
                      +.+|+..++ ..+++++++. +||.+.++.    .+...+......    ...|..              + ....+.. 
T Consensus       154 g~~Dl~~~~a~~l~~~vi~~-l~G~~~~~~----~~~~~~~~~~~~----~~~~~~--------------~-~~~~~~~-  208 (381)
T 2yjn_B          154 ARLDLVGDFAWQVPVQGMTA-VLGAAGVLR----GAAWDARVSLDA----QLSPQQ--------------L-AVTEAAV-  208 (381)
T ss_dssp             ----CCCCCCTHHHHHHHHT-C-----CCH----HHHHHHTTHHHH----TTSCCC--------------H-HHHHHHH-
T ss_pred             CcchHHHHHHHHHHHHHHHH-HcCCCHHHH----HHHHHHHHhccC----CCCHHH--------------H-HHHHHHH-
Confidence            147877665 6999999999 599987643    222222111110    000100              0 0000000 


Q ss_pred             HhhHHhhcCCCHHHHHHHHHHHHhcccccHHHHHHHHHHHHhcChHHHHHHHHHHHHHhCCCCCChhhhccChhHHHHHH
Q 046539          269 KEIQEKEAGMSIEEVIEECKLFYLAGQETTASLLVWVLIMLCMHPIWQERARQEVFQVLGNKEPKFDELNRLKMVGKIIY  348 (484)
Q Consensus       269 ~~~~~~~~~l~~~~i~~~~~~~~~aG~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~  348 (484)
                      .+       +..    +++..+++||+|||+++++|++++|++||++|+++++|+                 .|++++|+
T Consensus       209 ~~-------l~~----~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~-----------------~~l~~~i~  260 (381)
T 2yjn_B          209 AA-------LPA----DPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDP-----------------AAAQRTVA  260 (381)
T ss_dssp             HH-------CC------CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC-----------------C--HHHHH
T ss_pred             HH-------HHH----HHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCH-----------------HHHHHHhC
Confidence            00       111    678899999999999999999999999999999999883                 49999999


Q ss_pred             HhhcCCCCcccccccccccceecCEEeCCCCeEEechhhhhcCCCCccCCCCCCCCCCCCCcchhhhcCCCCcccccCCC
Q 046539          349 EVFRIYSPAYLIFRTNVEETKLGDFILPPGVLLSLPIILVHHDHEYWGDDAKAFNPDRFSEGVSKAAKNNEVSFFPFGGG  428 (484)
Q Consensus       349 E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~G~~v~~~~~~~~~d~~~~g~~p~~F~P~R~l~~~~~~~~~~~~~~~~Fg~G  428 (484)
                      |+||++|+++.+.|.+++|++++|+.||||+.|.++.+++||||++| +||++|+|+||.+          ..++|||.|
T Consensus       261 E~LR~~pp~~~~~R~a~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~-~dp~~F~p~R~~~----------~~~l~FG~G  329 (381)
T 2yjn_B          261 EVLRLHPALHLERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVF-AEPDRLDVDRPDA----------DRALSAHRG  329 (381)
T ss_dssp             HHHHHSCSCSEEEEEESSCEESSSCEECTTCEEEEEHHHHTTCTTTS-SSTTSCCSSCSCC----------CCCCC----
T ss_pred             eeeeecCCCcceeEEECCCeEECCEEECCCCEEEeCHHHHcCCcccC-CCccccCCCCCCC----------CCccCCCCC
Confidence            99999999999889999999999999999999999999999999999 9999999999974          358999999


Q ss_pred             CCCccchHHHHHHHHHHHHHHHHhc-EEEeCCCcccCCCCcceeccCCCcceee
Q 046539          429 PRICIGQNFALMEVKLALAMILQNF-SFQLSPTYVHAPSSGITVYPQHGAHMIL  481 (484)
Q Consensus       429 ~r~C~G~~la~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~~~~~~~v~~  481 (484)
                       |.|+|++||++|++++++.|+++| +++++++. .....+.+.++...++|++
T Consensus       330 -h~C~G~~lA~~e~~~~l~~ll~~~p~~~l~~~~-~~~~~~~~~r~~~~LpV~l  381 (381)
T 2yjn_B          330 -HPGRLEELVTALATAALRAAAKALPGLTPSGPV-VRRRRSPVLRGTNRCPVEL  381 (381)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHTTTTCCC-----CC-EECTTCSSSCCEEECCCC-
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHhCCCcEECCCC-cccccCcccCCCccceeeC
Confidence             999999999999999999999999 99987654 2334455667777777764


No 78 
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=52.82  E-value=15  Score=19.88  Aligned_cols=16  Identities=13%  Similarity=0.326  Sum_probs=8.4

Q ss_pred             chhhHHHHHHHHHHHH
Q 046539            2 SLAFFSAFATIILAYC   17 (484)
Q Consensus         2 ~~~~~~~l~~~~~~~~   17 (484)
                      .++++..++++++.+.
T Consensus         9 alt~i~gl~vif~~lg   24 (40)
T 2l9u_A            9 ALTVIAGLVVIFMMLG   24 (40)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhC
Confidence            4555555555554443


No 79 
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=22.87  E-value=62  Score=15.60  Aligned_cols=12  Identities=33%  Similarity=0.371  Sum_probs=9.3

Q ss_pred             HHHHHHHHHHHH
Q 046539          314 IWQERARQEVFQ  325 (484)
Q Consensus       314 ~~~~~l~~Ei~~  325 (484)
                      ..|.++|+|+.+
T Consensus         8 nlqkkirkelkq   19 (26)
T 1m46_B            8 NLQKKIRKELKQ   19 (26)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            468899998754


No 80 
>3bej_E Nuclear receptor coactivator 1; FXR, BAR, NR1H4, bIle acid receptor, NHR, alternative splicing, DNA-binding, metal-binding nucleus, repressor; HET: MUF; 1.90A {Homo sapiens} PDB: 1fm9_B* 1k74_B* 1fm6_B* 1p8d_C* 1rdt_B* 1nrl_C* 3ipq_B* 3ips_C* 3ipu_C* 4dm6_E* 4dm8_C* 3kmg_B* 2hfp_B* 1k7l_B*
Probab=21.67  E-value=87  Score=15.51  Aligned_cols=22  Identities=27%  Similarity=0.280  Sum_probs=18.7

Q ss_pred             ccchHHHHHHHHHHHHHHHHhc
Q 046539          432 CIGQNFALMEVKLALAMILQNF  453 (484)
Q Consensus       432 C~G~~la~~~~~~~l~~ll~~f  453 (484)
                      |+..+-...|---++-+|||+-
T Consensus         1 cpss~~sL~EkHkILHrLLQ~~   22 (26)
T 3bej_E            1 CPSSHSSLTERHKILHRLLQEG   22 (26)
T ss_pred             CCCchhhHHHHHHHHHHHHHcC
Confidence            7888888899889999999873


Done!