BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046540
(93 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4
PE=2 SV=1
Length = 127
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
Query: 39 DLATRLEASGGLTECWNVLMEPPKSCSNEIVIFFLSLIARL 79
++A RL+ SGGL ECWN L E KSC+NEIV+FFL+ +L
Sbjct: 35 NIAARLQ-SGGLMECWNALYE-LKSCTNEIVLFFLNGETKL 73
>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2
PE=2 SV=1
Length = 125
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 41/81 (50%), Gaps = 12/81 (14%)
Query: 1 MAPKHVFFILALTCLIMANIANAT--SRNDCLNNNMKLGYDLATRLEASGGLTECWNVLM 58
MA F + L++ NI+ T D N +A RL GGL ECWN L
Sbjct: 1 MASNTSFLFATIAILLVLNISGRTLPETEDSTN--------IAARLNG-GGLMECWNALY 51
Query: 59 EPPKSCSNEIVIFFLSLIARL 79
E KSC+NEIV+FFL+ +L
Sbjct: 52 EL-KSCTNEIVLFFLNGETKL 71
>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3
PE=2 SV=1
Length = 125
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 39 DLATRLEASGGLTECWNVLMEPPKSCSNEIVIFFLSLIARL 79
++A RL GGL +CW+ L E KSC+NEIV+FFL+ +L
Sbjct: 33 NIAARLTG-GGLMQCWDALYEL-KSCTNEIVLFFLNGETKL 71
>sp|Q9FGG1|EC15_ARATH Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5
PE=2 SV=1
Length = 155
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 40 LATRLEASGGLTECWNVLMEPPKSCSNEIVIFFLS 74
+AT +G L +CWN +E KSC++EIV FFLS
Sbjct: 40 MATDHSGAGNLMDCWNAGLEL-KSCTDEIVKFFLS 73
>sp|Q9YEU2|KPYK_AERPE Pyruvate kinase OS=Aeropyrum pernix (strain ATCC 700893 / DSM
11879 / JCM 9820 / NBRC 100138 / K1) GN=pyk PE=1 SV=1
Length = 458
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 16 IMANIANATSRNDCLNNNMKLGYDLATRLEASGGLTECWNVLME 59
I+A + ++S L + LG D+A R+ AS G E WN ++E
Sbjct: 7 IVATVGPSSSSASILAQMLSLGVDVA-RINASHGGVEQWNSMLE 49
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.138 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,720,955
Number of Sequences: 539616
Number of extensions: 856178
Number of successful extensions: 2178
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2174
Number of HSP's gapped (non-prelim): 8
length of query: 93
length of database: 191,569,459
effective HSP length: 63
effective length of query: 30
effective length of database: 157,573,651
effective search space: 4727209530
effective search space used: 4727209530
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)