BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 046541
         (94 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O22969|Y2416_ARATH Uncharacterized protein At2g34160 OS=Arabidopsis thaliana
           GN=At2g34160 PE=1 SV=1
          Length = 130

 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/86 (50%), Positives = 60/86 (69%)

Query: 4   QRYIKQYNDIELTALGMAIPTVVTIAEALKRDGLASNIEVKISTVNSKKDDEGRFFQKAK 63
           +RY++QYND+EL+ALGMAI TVVT+ E LK +G A   ++  STV+ K D  GR  QKAK
Sbjct: 40  KRYMQQYNDVELSALGMAIATVVTVTEILKNNGFAVEKKIMTSTVDIKDDARGRPVQKAK 99

Query: 64  IQIVLGKAEKLEKAVVATTAPKETSD 89
           I+I L K+EK ++ + A    KE ++
Sbjct: 100 IEITLVKSEKFDELMAAANEEKEDAE 125


>sp|O30274|ACDA2_ARCFU Acetyl-CoA decarbonylase/synthase complex subunit alpha 2
           OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 /
           DSM 4304 / JCM 9628 / NBRC 100126) GN=cdhA2 PE=3 SV=1
          Length = 798

 Score = 36.2 bits (82), Expect = 0.057,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 15  LTALGMAIPTVVTIAEALKRDGLASNIEVKISTVNSKKDDEGRFFQKAKIQIVLGKAEKL 74
           +  +G   P V+ IA+ ++ +GL    EV +  +    +D  R++QKAKI   LG+  K+
Sbjct: 241 ILVIGHHAPPVLNIADYIEENGLED--EVDLGGICCTANDMTRYYQKAKIVSALGRQLKV 298

Query: 75  EKAVVA 80
            +A +A
Sbjct: 299 IRAGLA 304


>sp|Q8TI16|ECFA_METAC Energy-coupling factor transporter ATP-binding protein EcfA
           OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM
           2834 / JCM 12185 / C2A) GN=ecfA PE=3 SV=1
          Length = 274

 Score = 31.2 bits (69), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 11  NDIELTALGMAIPTVVTIAEALKRDGLASNIEVKISTVNSKKDDEGRFFQK 61
           +D+ L  LG+  P+++ +AE LK  G+A   E K S+ +S  ++  R F K
Sbjct: 224 SDLSLRYLGLTPPSLIELAERLKNHGVAVPWE-KTSSPSSFAEEICRLFLK 273


>sp|B1I3J6|DXS_DESAP 1-deoxy-D-xylulose-5-phosphate synthase OS=Desulforudis audaxviator
           (strain MP104C) GN=dxs PE=3 SV=1
          Length = 634

 Score = 29.6 bits (65), Expect = 5.8,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 2/43 (4%)

Query: 1   MPLQR--YIKQYNDIELTALGMAIPTVVTIAEALKRDGLASNI 41
           +P+ R   +++ +DI L A+G  +PT V  AE L   G+ +++
Sbjct: 487 LPIGRAEVLREGDDITLIAIGNMVPTAVKAAEILAERGIEASV 529


>sp|Q8DQY0|PYRG_STRR6 CTP synthase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
           GN=pyrG PE=3 SV=1
          Length = 535

 Score = 29.3 bits (64), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 11/26 (42%), Positives = 19/26 (73%)

Query: 26  VTIAEALKRDGLASNIEVKISTVNSK 51
           +++ EALK  G  +++EVKI+ VN+ 
Sbjct: 308 ISVVEALKHSGYVNDVEVKINWVNAN 333


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.312    0.128    0.330 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,207,896
Number of Sequences: 539616
Number of extensions: 927974
Number of successful extensions: 2688
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 2676
Number of HSP's gapped (non-prelim): 27
length of query: 94
length of database: 191,569,459
effective HSP length: 64
effective length of query: 30
effective length of database: 157,034,035
effective search space: 4711021050
effective search space used: 4711021050
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)