Query 046541
Match_columns 94
No_of_seqs 55 out of 57
Neff 3.3
Searched_HMMs 29240
Date Mon Mar 25 23:15:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046541.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046541hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vm0_A Unknown protein; struct 100.0 2.1E-32 7E-37 196.1 9.3 89 3-91 39-127 (130)
2 1nfj_A ALBA, conserved hypothe 99.6 4.8E-15 1.6E-19 99.0 7.7 67 3-70 20-89 (89)
3 1nh9_A MJA10B, DNA-binding pro 99.6 8.8E-15 3E-19 97.4 7.3 67 3-70 19-87 (87)
4 2bky_A DNA/RNA-binding protein 99.5 1.9E-14 6.5E-19 97.6 7.2 68 3-71 26-97 (97)
5 2h9u_A DNA/RNA-binding protein 99.4 2E-13 6.7E-18 93.5 7.3 69 5-73 26-100 (102)
6 3toe_A MTH10B, DNA/RNA-binding 99.1 1.3E-10 4.6E-15 78.6 7.5 62 8-70 27-90 (91)
7 2bky_X DNA/RNA-binding protein 99.1 3.8E-10 1.3E-14 75.6 6.8 61 5-71 26-88 (89)
8 3iab_B Ribonucleases P/MRP pro 96.2 0.0056 1.9E-07 44.2 4.4 49 4-53 49-102 (140)
9 1ve4_A ATP phosphoribosyltrans 74.7 0.28 9.7E-06 36.6 -1.8 48 3-50 119-179 (206)
10 1o63_A ATP phosphoribosyltrans 73.8 0.35 1.2E-05 36.5 -1.5 48 3-50 114-174 (219)
11 1z7m_E ATP phosphoribosyltrans 72.1 1.3 4.3E-05 33.0 1.2 48 3-50 121-181 (208)
12 1h3d_A ATP-phosphoribosyltrans 68.3 0.51 1.7E-05 36.9 -1.8 48 3-50 135-195 (299)
13 2vd2_A ATP phosphoribosyltrans 58.4 0.37 1.3E-05 36.1 -4.1 48 3-50 123-183 (214)
14 1ukk_A Osmotically inducible p 49.3 15 0.0005 24.4 3.1 67 14-81 48-119 (142)
15 3iab_A Ribonucleases P/MRP pro 48.2 9 0.00031 28.0 2.0 27 8-34 74-100 (158)
16 1nh8_A ATP phosphoribosyltrans 46.2 3.8 0.00013 32.2 -0.3 47 3-49 140-200 (304)
17 3dkr_A Esterase D; alpha beta 44.9 21 0.00071 22.4 3.2 30 11-40 24-53 (251)
18 3ju3_A Probable 2-oxoacid ferr 42.0 39 0.0013 21.8 4.2 72 8-80 11-85 (118)
19 1s03_H 30S ribosomal protein S 40.3 85 0.0029 21.3 5.9 33 7-43 18-50 (129)
20 1umd_B E1-beta, 2-OXO acid deh 36.4 44 0.0015 24.8 4.2 38 8-45 200-238 (324)
21 4fbl_A LIPS lipolytic enzyme; 36.0 31 0.0011 23.6 3.2 29 12-40 54-82 (281)
22 1sei_A Ribosomal protein S8; p 34.8 1.1E+02 0.0036 20.8 6.2 33 7-43 18-50 (130)
23 3pe6_A Monoglyceride lipase; a 34.7 39 0.0013 21.7 3.3 29 12-40 45-73 (303)
24 1qwi_A OSMC, osmotically induc 33.7 13 0.00043 24.6 0.8 66 14-80 50-120 (143)
25 3vis_A Esterase; alpha/beta-hy 33.1 48 0.0016 23.0 3.8 30 12-41 99-128 (306)
26 1nye_A Osmotically inducible p 32.4 17 0.00059 24.9 1.3 67 14-80 69-139 (162)
27 1w85_B Pyruvate dehydrogenase 30.4 43 0.0015 24.9 3.3 38 8-45 199-237 (324)
28 2d7v_A Hypothetical protein VC 28.5 63 0.0022 21.8 3.7 62 19-81 72-142 (162)
29 3rm3_A MGLP, thermostable mono 28.5 50 0.0017 21.4 3.1 29 12-40 43-71 (270)
30 1fj2_A Protein (acyl protein t 27.8 52 0.0018 20.8 3.0 30 12-41 26-55 (232)
31 3f67_A Putative dienelactone h 27.7 64 0.0022 20.4 3.4 29 12-40 35-63 (241)
32 2w5v_A Alkaline phosphatase; p 26.8 21 0.00071 26.8 1.0 17 24-40 110-126 (375)
33 1vla_A Hydroperoxide resistanc 26.7 70 0.0024 21.4 3.6 61 18-80 56-124 (150)
34 4f0j_A Probable hydrolytic enz 26.6 60 0.0021 21.1 3.2 29 12-40 49-77 (315)
35 1tqh_A Carboxylesterase precur 26.5 70 0.0024 21.1 3.5 29 12-40 19-47 (247)
36 3sty_A Methylketone synthase 1 26.4 62 0.0021 20.7 3.2 30 11-40 14-43 (267)
37 2fx5_A Lipase; alpha-beta hydr 26.4 45 0.0015 22.3 2.6 29 12-40 52-80 (258)
38 1ml8_A Hypothetical protein (C 26.2 99 0.0034 19.7 4.2 50 19-70 43-93 (134)
39 2wtm_A EST1E; hydrolase; 1.60A 25.7 70 0.0024 21.0 3.4 29 12-40 30-60 (251)
40 1b8z_A Protein (histonelike pr 25.7 29 0.00099 21.3 1.4 18 4-21 33-50 (90)
41 2qjw_A Uncharacterized protein 25.5 77 0.0026 19.2 3.4 29 12-40 7-37 (176)
42 1ufo_A Hypothetical protein TT 25.5 30 0.001 21.7 1.5 29 12-40 27-55 (238)
43 2ozl_B PDHE1-B, pyruvate dehyd 25.2 80 0.0027 23.9 4.1 39 7-45 213-252 (341)
44 1zi8_A Carboxymethylenebutenol 25.0 80 0.0027 19.9 3.5 29 12-40 31-59 (236)
45 4ao6_A Esterase; hydrolase, th 24.9 63 0.0022 22.0 3.2 29 13-41 60-90 (259)
46 3ksr_A Putative serine hydrola 24.6 54 0.0018 21.6 2.7 29 12-40 31-59 (290)
47 2o97_B NS1, HU-1, DNA-binding 24.4 31 0.0011 21.2 1.4 17 4-20 33-49 (90)
48 1tht_A Thioesterase; 2.10A {Vi 24.4 60 0.002 23.0 3.1 29 12-40 38-66 (305)
49 2onf_A Hypothetical protein TA 24.4 1.1E+02 0.0037 19.6 4.1 61 19-80 50-116 (140)
50 2vo1_A CTP synthase 1; pyrimid 24.1 28 0.00097 27.6 1.4 30 15-45 33-63 (295)
51 1auo_A Carboxylesterase; hydro 23.7 65 0.0022 20.1 2.8 30 12-41 17-48 (218)
52 2r8o_A Transketolase 1, TK 1; 23.7 58 0.002 27.0 3.2 28 11-38 550-577 (669)
53 2e6k_A Transketolase; structur 23.7 67 0.0023 26.6 3.6 28 11-38 542-569 (651)
54 4h0c_A Phospholipase/carboxyle 23.7 28 0.00097 23.6 1.2 28 13-40 26-53 (210)
55 1mul_A NS2, HU-2, DNA binding 23.6 34 0.0011 21.0 1.4 17 4-20 33-49 (90)
56 3dqz_A Alpha-hydroxynitrIle ly 23.6 46 0.0016 21.1 2.1 30 11-40 6-35 (258)
57 3cn9_A Carboxylesterase; alpha 23.4 81 0.0028 20.1 3.3 29 13-41 28-58 (226)
58 1itz_A Transketolase; calvin c 23.2 75 0.0026 26.5 3.8 28 11-38 563-590 (675)
59 4fdi_A N-acetylgalactosamine-6 23.2 26 0.00088 27.2 1.0 17 24-40 94-110 (502)
60 2e8e_A Hypothetical protein AQ 23.0 1.4E+02 0.0048 18.9 4.5 60 20-80 42-104 (132)
61 1hkh_A Gamma lactamase; hydrol 23.0 80 0.0028 20.7 3.3 30 11-40 25-54 (279)
62 3bdi_A Uncharacterized protein 22.8 60 0.0021 20.0 2.5 29 12-40 30-60 (207)
63 1p71_A DNA-binding protein HU; 22.8 35 0.0012 21.2 1.4 17 4-20 33-49 (94)
64 3rhi_A DNA-binding protein HU; 22.5 36 0.0012 21.2 1.4 17 4-20 36-52 (93)
65 3qit_A CURM TE, polyketide syn 22.3 84 0.0029 19.8 3.2 30 11-40 28-57 (286)
66 1p6r_A Penicillinase repressor 22.1 75 0.0025 18.4 2.7 37 6-42 17-61 (82)
67 1zoi_A Esterase; alpha/beta hy 22.1 80 0.0027 20.8 3.2 29 12-40 25-53 (276)
68 3pfb_A Cinnamoyl esterase; alp 21.8 95 0.0032 20.0 3.4 29 12-40 49-79 (270)
69 1a8s_A Chloroperoxidase F; hal 21.7 83 0.0029 20.5 3.2 30 11-40 21-50 (273)
70 1owf_B IHF-beta, integration H 21.7 38 0.0013 21.0 1.4 17 4-20 34-50 (94)
71 3l84_A Transketolase; TKT, str 21.6 84 0.0029 26.2 3.8 36 10-45 525-561 (632)
72 3hju_A Monoglyceride lipase; a 21.3 91 0.0031 21.0 3.3 29 12-40 63-91 (342)
73 3rim_A Transketolase, TK; TPP, 21.0 88 0.003 26.6 3.9 34 12-45 586-620 (700)
74 2rau_A Putative esterase; NP_3 20.9 78 0.0027 21.7 3.0 29 12-40 53-97 (354)
75 2vd3_A ATP phosphoribosyltrans 20.8 19 0.00065 27.9 -0.2 48 3-50 126-186 (289)
76 3c4i_A DNA-binding protein HU 20.8 41 0.0014 21.2 1.4 17 4-20 33-49 (99)
77 1gpu_A Transketolase; transfer 20.7 81 0.0028 26.3 3.5 28 11-38 555-582 (680)
78 2np2_A HBB; protein-DNA comple 20.4 41 0.0014 21.6 1.4 17 4-20 46-62 (108)
79 3m49_A Transketolase; alpha-be 20.4 85 0.0029 26.6 3.6 34 12-45 578-612 (690)
80 1a88_A Chloroperoxidase L; hal 20.3 93 0.0032 20.3 3.2 30 11-40 23-52 (275)
81 3d59_A Platelet-activating fac 20.1 68 0.0023 23.2 2.6 29 12-40 101-129 (383)
82 3uk1_A Transketolase; structur 20.1 85 0.0029 26.7 3.6 35 11-45 598-633 (711)
83 1jfr_A Lipase; serine hydrolas 20.0 57 0.0019 21.6 2.1 29 12-40 57-85 (262)
No 1
>1vm0_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2 unknown function, nitrate; 1.80A {Arabidopsis thaliana} SCOP: d.68.6.2 PDB: 2q3v_A
Probab=99.97 E-value=2.1e-32 Score=196.08 Aligned_cols=89 Identities=48% Similarity=0.708 Sum_probs=72.1
Q ss_pred hHhhhhhcCcEEEecccchhhHHHHHHHHhhhCCeEEEEEEeeeeeeecCCCCCCcccceeEEEEEeeccchHHHHhhcc
Q 046541 3 LQRYIKQYNDIELTALGMAIPTVVTIAEALKRDGLASNIEVKISTVNSKKDDEGRFFQKAKIQIVLGKAEKLEKAVVATT 82 (94)
Q Consensus 3 ~Kr~l~~~~eVeLsALG~AI~tvVtvAEiLK~nglAt~kkI~Tstv~~~~~~~gr~~qKaKIeI~L~Ks~~FD~~~a~~~ 82 (94)
+++||++|++|+|+|||+||+.+|+|||||||+||+++++|.|||++++++.+||+++++||||+|.|+++||++|++++
T Consensus 39 a~~~l~g~~eV~LkA~G~AIskAV~VAEiLkrr~l~~ikkI~t~t~~i~~~~~~r~v~~skIEI~L~k~~~fd~~~~~~~ 118 (130)
T 1vm0_A 39 AKRYMQQYNDVELSALGMAIATVVTVTEILKNNGFAVEKKIMTSIVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAAN 118 (130)
T ss_dssp HHHHHHHHSEEEEEEEGGGHHHHHHHHHHHHHTTSEEEEEEEEEEEEEC------CEEEEEEEEEEEECTTHHHHHHHC-
T ss_pred HHHHHcCCCEEEEEechHHHHHHHHHHHHHHhcCcceEEEEEeeeEEeccCCCCcccccceEEEEEEecCcHHHHHHHhh
Confidence 68999999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred CCCCCCCCC
Q 046541 83 APKETSDTD 91 (94)
Q Consensus 83 ~~~e~~~~~ 91 (94)
++||+.+++
T Consensus 119 ~~~~~~~~~ 127 (130)
T 1vm0_A 119 EEKEDAETQ 127 (130)
T ss_dssp ---------
T ss_pred hhhcccccc
Confidence 999986654
No 2
>1nfj_A ALBA, conserved hypothetical protein AF1956; SIR2, HDAC, gene regulation, transcription; 2.00A {Archaeoglobus fulgidus} SCOP: d.68.6.1 PDB: 1nfh_A 2z7c_A*
Probab=99.58 E-value=4.8e-15 Score=99.03 Aligned_cols=67 Identities=27% Similarity=0.372 Sum_probs=58.2
Q ss_pred hHhhhhh-cCcEEEecccchhhHHHHHHHHhhhCCe--EEEEEEeeeeeeecCCCCCCcccceeEEEEEee
Q 046541 3 LQRYIKQ-YNDIELTALGMAIPTVVTIAEALKRDGL--ASNIEVKISTVNSKKDDEGRFFQKAKIQIVLGK 70 (94)
Q Consensus 3 ~Kr~l~~-~~eVeLsALG~AI~tvVtvAEiLK~ngl--At~kkI~Tstv~~~~~~~gr~~qKaKIeI~L~K 70 (94)
+..+|++ +++|.|+|+|.||+.+|.|||||||+.+ ..+++|.++|..+.++ +||..+.+.|+|+|.|
T Consensus 20 ~~~~l~~g~~eV~ika~G~AIskAV~vaeilk~r~~~gl~i~~i~i~s~~i~~e-~g~~r~vs~IeI~L~k 89 (89)
T 1nfj_A 20 TLTQLNEGADEVVIKARGRAISRAVDVAEIVRNRFMPGVKVKEIKIDTEELESE-QGRRSNVSTIEIVLAK 89 (89)
T ss_dssp HHHHHHTTCSEEEEEEETTHHHHHHHHHHHHHHHTCTTCEEEEEEEEEEECCCB-TTBCCEEEEEEEEEEC
T ss_pred HHHHHhCCCCEEEEEEecHHHHHHHHHHHHHHHhccCCcEEEEEEEeEEEEEcC-CCcEEEeeEEEEEEEC
Confidence 3455654 8999999999999999999999999987 4679999999998765 5788899999999986
No 3
>1nh9_A MJA10B, DNA-binding protein ALBA; 2.00A {Methanocaldococcus jannaschii} SCOP: d.68.6.1
Probab=99.56 E-value=8.8e-15 Score=97.41 Aligned_cols=67 Identities=25% Similarity=0.362 Sum_probs=53.8
Q ss_pred hHhhhhhcCcEEEecccchhhHHHHHHHHhhhCCe--EEEEEEeeeeeeecCCCCCCcccceeEEEEEee
Q 046541 3 LQRYIKQYNDIELTALGMAIPTVVTIAEALKRDGL--ASNIEVKISTVNSKKDDEGRFFQKAKIQIVLGK 70 (94)
Q Consensus 3 ~Kr~l~~~~eVeLsALG~AI~tvVtvAEiLK~ngl--At~kkI~Tstv~~~~~~~gr~~qKaKIeI~L~K 70 (94)
+...|++.++|.|+|+|.||+.+|+|||||||+.+ .-+++|.+||..+.++ +||..+.+.|+|+|.|
T Consensus 19 ~~~~l~~g~eV~ikA~G~AIskAV~vaeilk~r~~~~l~v~~i~i~s~~i~~e-~g~~r~vS~IeI~L~k 87 (87)
T 1nh9_A 19 VLTQLTSNDEVIIKARGKAINKAVDVAEMIRNRFIKDIKIKKIEIGTDKVKNP-DGREVNVSTIEIVLAK 87 (87)
T ss_dssp HHHHHHHCSEEEEEEEGGGHHHHHHHHHHHHHHTCTTCEEEEEEEEEEC--------CCCEEEEEEEEEC
T ss_pred HHHHhcCCCEEEEEEechHHHHHHHHHHHHHHhccCCeEEEEEEEeEEEEEcC-CCcEEEeeEEEEEEEC
Confidence 45667777999999999999999999999999886 4569999999998765 5788899999999986
No 4
>2bky_A DNA/RNA-binding protein ALBA 1; archaeal DNA binding protein, DNA condensation, DNA-binding, DNA binding protein; 1.70A {Sulfolobus solfataricus} SCOP: d.68.6.1 PDB: 1h0x_A* 1h0y_A* 1y9x_A
Probab=99.53 E-value=1.9e-14 Score=97.65 Aligned_cols=68 Identities=22% Similarity=0.297 Sum_probs=59.0
Q ss_pred hHhhhhh-cCcEEEecccchhhHHHHHHHHhhhCCeE--E-EEEEeeeeeeecCCCCCCcccceeEEEEEeec
Q 046541 3 LQRYIKQ-YNDIELTALGMAIPTVVTIAEALKRDGLA--S-NIEVKISTVNSKKDDEGRFFQKAKIQIVLGKA 71 (94)
Q Consensus 3 ~Kr~l~~-~~eVeLsALG~AI~tvVtvAEiLK~nglA--t-~kkI~Tstv~~~~~~~gr~~qKaKIeI~L~Ks 71 (94)
+..+|++ +++|.|+|+|.||+.+|.|||||||+.+- + .++|.++|..+.++ +||..+.+.|+|+|.|.
T Consensus 26 a~~ll~~g~~eV~ikA~G~AIskAV~vaeilk~r~~~~~l~~~~i~i~s~~i~~e-~G~~r~vS~IeI~L~k~ 97 (97)
T 2bky_A 26 ALTLLNQGVSEIVIKARGRAISKAVDTVEIVRNRFLPDKIEIKEIRVGSQVVTSQ-DGRQSRVSTIEIAIRKK 97 (97)
T ss_dssp HHHHHHTTCCEEEEEEETTHHHHHHHHHHHHHHHTSTTTEEEEEEEEEEEEEEET-TSCEEEEEEEEEEEEEC
T ss_pred HHHHHhCCCCEEEEEEechHHHHHHHHHHHHHHhccCCceEEEEEEeeeEEEecC-CCcEEEeeEEEEEEEcC
Confidence 3455655 89999999999999999999999999985 4 79999999998765 57888999999999873
No 5
>2h9u_A DNA/RNA-binding protein ALBA 2; archaea, DNA binding protein, structural G NPPSFA, national project on protein structural and function analyses; 2.00A {Aeropyrum pernix} PDB: 3u6y_A*
Probab=99.45 E-value=2e-13 Score=93.46 Aligned_cols=69 Identities=22% Similarity=0.273 Sum_probs=58.5
Q ss_pred hhh-hhcCcEEEecccchhhHHHHHHHHhhhCCe--EEEEEEeeeeeeecCCC-CCC--cccceeEEEEEeeccc
Q 046541 5 RYI-KQYNDIELTALGMAIPTVVTIAEALKRDGL--ASNIEVKISTVNSKKDD-EGR--FFQKAKIQIVLGKAEK 73 (94)
Q Consensus 5 r~l-~~~~eVeLsALG~AI~tvVtvAEiLK~ngl--At~kkI~Tstv~~~~~~-~gr--~~qKaKIeI~L~Ks~~ 73 (94)
..| +++++|.|+|+|.||+.+|+|||||||+.+ .-++.|++|++.+.++. +|+ ..+.+.|+|+|.|.+.
T Consensus 26 ~ll~~g~~eV~ikA~G~AIskAV~vaEilk~r~~~gl~~q~i~i~s~~i~d~~e~g~~~~r~vS~IeI~Lsk~~~ 100 (102)
T 2h9u_A 26 TLMEQGTNQVVVKARGRNINRAVDAVEIVRKRFAKNIEIKDIKIDSQEIEVQTPEGQTRTRRVSSIEICLEKAGE 100 (102)
T ss_dssp HHTSTTCCEEEEEEETTHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEECSS
T ss_pred HHHhCCCCEEEEEEechhhhHHHHHHHHHHHhccCCceEEEEEEeeEEEeccccCCccceeEeeeEEEEEEccCC
Confidence 345 448999999999999999999999999887 55699999999886652 455 6789999999999874
No 6
>3toe_A MTH10B, DNA/RNA-binding protein ALBA; SAC10B family, alpha/beta mixed, homodimer, unknown function; 2.20A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.14 E-value=1.3e-10 Score=78.64 Aligned_cols=62 Identities=26% Similarity=0.296 Sum_probs=54.9
Q ss_pred hhcCcEEEecccchhhHHHHHHHHhhhCCe--EEEEEEeeeeeeecCCCCCCcccceeEEEEEee
Q 046541 8 KQYNDIELTALGMAIPTVVTIAEALKRDGL--ASNIEVKISTVNSKKDDEGRFFQKAKIQIVLGK 70 (94)
Q Consensus 8 ~~~~eVeLsALG~AI~tvVtvAEiLK~ngl--At~kkI~Tstv~~~~~~~gr~~qKaKIeI~L~K 70 (94)
+++++|.|.|.|.||+.+|.||||||++-+ ..+++|.+++.....+ +|+....+.|||+|.|
T Consensus 27 ~g~~eV~ikA~G~aIskAVdvaei~k~R~~~~v~v~~I~I~se~~~~e-~G~~r~VS~IeI~L~k 90 (91)
T 3toe_A 27 GGTSEVILKARGIAISRAVDVAEIVRNRFIPDIQIENIDICTEEIIGN-EGTATNVSAIEIQLRK 90 (91)
T ss_dssp TTCCEEEEEEETTHHHHHHHHHHHHHHHTCTTCEEEEEEEEEEEEECT-TSSEEEEEEEEEEEEC
T ss_pred CCCCEEEEEEehhHHHHHHHHHHHHHHhccCCcEEEEEEeeeEEeecC-CCceeEeeEEEEEEEC
Confidence 569999999999999999999999999877 8999999988887544 5677789999999987
No 7
>2bky_X DNA/RNA-binding protein ALBA 2; archaeal DNA binding protein, DNA condensation, DNA-binding, DNA binding protein; 1.70A {Sulfolobus solfataricus} SCOP: d.68.6.1 PDB: 2a2y_A 1udv_A
Probab=99.06 E-value=3.8e-10 Score=75.60 Aligned_cols=61 Identities=15% Similarity=0.139 Sum_probs=51.8
Q ss_pred hhhhhcCcEEEecccchhhHHHHHHHHhhhCCe--EEEEEEeeeeeeecCCCCCCcccceeEEEEEeec
Q 046541 5 RYIKQYNDIELTALGMAIPTVVTIAEALKRDGL--ASNIEVKISTVNSKKDDEGRFFQKAKIQIVLGKA 71 (94)
Q Consensus 5 r~l~~~~eVeLsALG~AI~tvVtvAEiLK~ngl--At~kkI~Tstv~~~~~~~gr~~qKaKIeI~L~Ks 71 (94)
.|-+++++|.|.|+|.||+.+|.|||||||.-+ ..+++|.+++.. ||....+.|+|+|.|.
T Consensus 26 ~ln~g~~eV~ikA~G~aIskAVdvaeilk~R~~~~~~i~~i~i~se~------~~~r~VS~IeI~L~k~ 88 (89)
T 2bky_X 26 LFNQGIDEVILKGTGREISKAVDVYNSLKDRLGDGVQLVNVQTGSEV------RDRRRISYILLRLKRV 88 (89)
T ss_dssp HHHTTCCEEEEEEETTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEEE------ETTEEEEEEEEEEEEC
T ss_pred HHhCCCCEEEEEEechHHHHHHHHHHHHHHhccCceEEEEEEecccc------CcceEeeeEEEEEEec
Confidence 344568999999999999999999999999766 788899998875 4445789999999874
No 8
>3iab_B Ribonucleases P/MRP protein subunit POP7; RNAse P, ribonuclease P, ribonuclease MRP, POP6, POP6P, POP7, POP7P, NME1, yeast, tRNA; 2.70A {Saccharomyces cerevisiae}
Probab=96.20 E-value=0.0056 Score=44.17 Aligned_cols=49 Identities=12% Similarity=0.295 Sum_probs=39.3
Q ss_pred Hhhhhh-----cCcEEEecccchhhHHHHHHHHhhhCCeEEEEEEeeeeeeecCC
Q 046541 4 QRYIKQ-----YNDIELTALGMAIPTVVTIAEALKRDGLASNIEVKISTVNSKKD 53 (94)
Q Consensus 4 Kr~l~~-----~~eVeLsALG~AI~tvVtvAEiLK~nglAt~kkI~Tstv~~~~~ 53 (94)
.++|.+ ..+|-|+|+|-||..++.+|=-|++++= ..-.|+|+||.+=|+
T Consensus 49 ~KlL~~~~k~~~~eV~v~GmGkAIeKal~lAl~fq~~~~-~~V~V~T~TV~vvDd 102 (140)
T 3iab_B 49 NKFLDSVHKQGSSYVAVLGMGKAVEKTLALGCHFQDQKN-KKIEVYTKTIEVLDE 102 (140)
T ss_dssp HHHHHHHHHHTCSEEEEEEEGGGHHHHHHHHHHHHHTTC-CCEEEEEEEEEEEEE
T ss_pred HHHHHHhhcCCCcEEEEEechHHHHHHHHHHHHHhhcCC-EEEEEEeceEEEEEe
Confidence 457775 7999999999999999999999999742 333599999965444
No 9
>1ve4_A ATP phosphoribosyltransferase; riken structural genomics/proteomics initiative structural genomics; 1.20A {Thermus thermophilus} SCOP: c.94.1.1
Probab=74.65 E-value=0.28 Score=36.57 Aligned_cols=48 Identities=29% Similarity=0.342 Sum_probs=37.1
Q ss_pred hHhhhhhcC----------cEEEe---cccchhhHHHHHHHHhhhCCeEEEEEEeeeeeee
Q 046541 3 LQRYIKQYN----------DIELT---ALGMAIPTVVTIAEALKRDGLASNIEVKISTVNS 50 (94)
Q Consensus 3 ~Kr~l~~~~----------eVeLs---ALG~AI~tvVtvAEiLK~nglAt~kkI~Tstv~~ 50 (94)
+++|+++++ .||+. ||--||.++|+--..|+.|||..+..|..|+..+
T Consensus 119 ~~~yf~~~gi~~~ii~l~GsvE~ap~~GlAD~IvDivsTG~TLraNgL~~ie~I~~ssA~L 179 (206)
T 1ve4_A 119 TARLLKERGWAADVVELSGNIELAAVTGLADAVVDVVQTGATLRAAGLVEVEVLAHSTARL 179 (206)
T ss_dssp HHHHHHHTTCCCEEEECSSCTHHHHHTTSSSEEEEEESSSHHHHHTTCEEEEEEEEECEEE
T ss_pred HHHHHHHCCCcEEEEECCCceeeccCCCCceEEEEeccCHHHHHHCCCEEeEEEEeeEEEE
Confidence 577887644 34443 4556788899999999999999999999887754
No 10
>1o63_A ATP phosphoribosyltransferase; structural genomics; 2.00A {Thermotoga maritima} SCOP: c.94.1.1 PDB: 1o64_A 1usy_E* 1usy_H*
Probab=73.78 E-value=0.35 Score=36.53 Aligned_cols=48 Identities=23% Similarity=0.289 Sum_probs=36.7
Q ss_pred hHhhhhhcC----------cEEEe---cccchhhHHHHHHHHhhhCCeEEEEEEeeeeeee
Q 046541 3 LQRYIKQYN----------DIELT---ALGMAIPTVVTIAEALKRDGLASNIEVKISTVNS 50 (94)
Q Consensus 3 ~Kr~l~~~~----------eVeLs---ALG~AI~tvVtvAEiLK~nglAt~kkI~Tstv~~ 50 (94)
+++|+++++ .||+. ||--||.++|+--..|+.|||..+..|..|+..+
T Consensus 114 ~r~yf~~~Gi~~~Ii~l~GsvE~aP~~GlADaIvDivsTG~TLraNgL~~ie~I~~SsA~L 174 (219)
T 1o63_A 114 TQRYCESKGWHCRIIPLKGSVELAPIAGLSDLIVDITETGRTLKENNLEILDEIFVIRTHV 174 (219)
T ss_dssp HHHHHHHHTCCEEEEECSSCTTHHHHHTSCSEEEEEESSSHHHHHTTEEEEEEEEEEEEEE
T ss_pred HHHHHHHCCCceEEEECCCceeeccCCCCcceeEEeeccHHHHHHCCCEEeeEEeeeEEEE
Confidence 577776643 33443 5566788889889999999999999999988764
No 11
>1z7m_E ATP phosphoribosyltransferase; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: c.94.1.1 PDB: 1z7n_E*
Probab=72.10 E-value=1.3 Score=32.96 Aligned_cols=48 Identities=23% Similarity=0.338 Sum_probs=36.8
Q ss_pred hHhhhhhcCc-EEEe------------cccchhhHHHHHHHHhhhCCeEEEEEEeeeeeee
Q 046541 3 LQRYIKQYND-IELT------------ALGMAIPTVVTIAEALKRDGLASNIEVKISTVNS 50 (94)
Q Consensus 3 ~Kr~l~~~~e-VeLs------------ALG~AI~tvVtvAEiLK~nglAt~kkI~Tstv~~ 50 (94)
+++|+++++- |++. ||--||.++|+--..|+.|||..+..|..|+..+
T Consensus 121 ~~~yf~~~gi~~~ii~l~GsvE~ap~~GlAD~IvDivsTG~TLr~NgL~~ie~I~~ssA~L 181 (208)
T 1z7m_E 121 TKKYFAQKQEDIEIIKLEGSVELGPVVGLADAIVDIVETGNTLSANGLEVIEKISDISTRM 181 (208)
T ss_dssp HHHHHHHTTCCEEEEECSSCTTHHHHTTSCSEEEEEESSSHHHHTTTCEEEEEEEECCEEE
T ss_pred HHHHHHHcCCceEEEECCCceeeccCCCcccEEEEEeCChHHHHHCCCEEeEEEEeeEEEE
Confidence 5788876542 3332 4556788899999999999999999999887754
No 12
>1h3d_A ATP-phosphoribosyltransferase; hisitidine biosynthesis, glycosyltransferase; HET: AMP TLA; 2.7A {Escherichia coli} SCOP: c.94.1.1 d.58.5.3 PDB: 1q1k_A*
Probab=68.33 E-value=0.51 Score=36.87 Aligned_cols=48 Identities=27% Similarity=0.360 Sum_probs=36.8
Q ss_pred hHhhhhhcC----------cEEEe---cccchhhHHHHHHHHhhhCCeEEEEEEeeeeeee
Q 046541 3 LQRYIKQYN----------DIELT---ALGMAIPTVVTIAEALKRDGLASNIEVKISTVNS 50 (94)
Q Consensus 3 ~Kr~l~~~~----------eVeLs---ALG~AI~tvVtvAEiLK~nglAt~kkI~Tstv~~ 50 (94)
+++|+++++ .||+. ||--||.++|+--..|+.|||..+..|..|+..+
T Consensus 135 ~~~yf~~~gi~~~ii~l~GsvE~aP~~GlADaIvDivsTG~TLraNgL~~ie~I~~SsA~L 195 (299)
T 1h3d_A 135 LKRYLDQKGISFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEANGLREVEVIYRSKACL 195 (299)
T ss_dssp HHHHHHHHTCCCEEEECSSCTTHHHHTTSCSEEEEEESSCHHHHHTTEEEEEEEEEECEEE
T ss_pred HHHHHHHcCCcEEEEECCCceeeccCCCccceEEecccCHHHHHHCCCEEeEEEEeeEEEE
Confidence 577887643 34444 4556788888888999999999999999887753
No 13
>2vd2_A ATP phosphoribosyltransferase; HISG, glycosyltransferase, histidine biosynthes amino-acid biosynthesis; 2.85A {Bacillus subtilis}
Probab=58.39 E-value=0.37 Score=36.10 Aligned_cols=48 Identities=25% Similarity=0.347 Sum_probs=36.2
Q ss_pred hHhhhhhcC----------cEEEe---cccchhhHHHHHHHHhhhCCeEEEEEEeeeeeee
Q 046541 3 LQRYIKQYN----------DIELT---ALGMAIPTVVTIAEALKRDGLASNIEVKISTVNS 50 (94)
Q Consensus 3 ~Kr~l~~~~----------eVeLs---ALG~AI~tvVtvAEiLK~nglAt~kkI~Tstv~~ 50 (94)
+++|+++++ .||+. ||--||.++|+--..|+.|||..+..|..|+..+
T Consensus 123 ~~~yf~~~gi~~~ii~l~GsvE~aP~~GlADaIvDivsTG~TLraNgL~~ie~I~~ssA~L 183 (214)
T 2vd2_A 123 ASSYFREQGEQVEIIKLNGSIELAPLIGLADRIVDIVSTGQTLKENGLVETEHICDITSRF 183 (214)
T ss_dssp HHHHHHHHCCCCEEEECCSCTTHHHHTTSCSEEEEEECCSSSSCTTSCEEEEEEEECCCEE
T ss_pred HHHHHHHcCCcEEEEECCCceeeccCCCCceEEEEEeCCHHHHHHCCCEEeEEEEeeEEEE
Confidence 577777643 33333 5556788888889999999999999999887754
No 14
>1ukk_A Osmotically inducible protein C; peroxidase, cysteinesulfinic acid, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.60A {Thermus thermophilus} SCOP: d.227.1.1
Probab=49.27 E-value=15 Score=24.40 Aligned_cols=67 Identities=21% Similarity=0.213 Sum_probs=37.0
Q ss_pred EEecccchhhHHHHHHHHhhhCCeEEEEEE-eeeeeeecCCCCCCcccceeEEEEEeec----cchHHHHhhc
Q 046541 14 ELTALGMAIPTVVTIAEALKRDGLASNIEV-KISTVNSKKDDEGRFFQKAKIQIVLGKA----EKLEKAVVAT 81 (94)
Q Consensus 14 eLsALG~AI~tvVtvAEiLK~nglAt~kkI-~Tstv~~~~~~~gr~~qKaKIeI~L~Ks----~~FD~~~a~~ 81 (94)
||=+.+.|--...++.-+++++|+-.. .+ -+-++++..++.|..+.+..+.+.+.-+ +.++++.+..
T Consensus 48 eLl~aalaaC~~~~~~~~a~~~g~~~~-~~~v~~~~~~~~~~~g~~it~i~~~~~v~~~~~~~e~~~~l~~~a 119 (142)
T 1ukk_A 48 ELIAAAHAGAFSMALAASLEREGFPPK-RVSTEARVHLEVVDGKPTLTRIELLTEAEVPGISSEKFLEIAEAA 119 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCS-EEEEEEEEEEECTTSSCEEEEEEEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCC-ceEEEEEEEEEecCCCcEEEEEEEEEEEEeCCCCHHHHHHHHHHH
Confidence 444444455566778889999999854 44 3455666555444322333433444333 3455665543
No 15
>3iab_A Ribonucleases P/MRP protein subunit POP6; RNAse P, ribonuclease P, ribonuclease MRP, POP6, POP6P, POP7, POP7P, NME1, yeast, tRNA; 2.70A {Saccharomyces cerevisiae}
Probab=48.23 E-value=9 Score=28.01 Aligned_cols=27 Identities=19% Similarity=0.260 Sum_probs=24.9
Q ss_pred hhcCcEEEecccchhhHHHHHHHHhhh
Q 046541 8 KQYNDIELTALGMAIPTVVTIAEALKR 34 (94)
Q Consensus 8 ~~~~eVeLsALG~AI~tvVtvAEiLK~ 34 (94)
.+..-|=|.+.|..|.-++++.||+|+
T Consensus 74 ~~~~~V~l~syg~hIQKmLSIvEI~Kk 100 (158)
T 3iab_A 74 GLQQVVCIFSYGPHIQKMLSILEIFKK 100 (158)
T ss_dssp TCEEEEEEEEEGGGHHHHHHHHHHHHH
T ss_pred ccCceEEEEecChHHHHHHHHHHHHHH
Confidence 566789999999999999999999998
No 16
>1nh8_A ATP phosphoribosyltransferase; prtase, de novo His biosynthesis, PRPP, structural genomics, PSI, protei structure initiative; HET: AMP HIS; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.94.1.1 d.58.5.3 PDB: 1nh7_A*
Probab=46.20 E-value=3.8 Score=32.24 Aligned_cols=47 Identities=15% Similarity=0.132 Sum_probs=36.1
Q ss_pred hHhhhhhcC-cEEE------------ecccchhhHHHHHHHHhhhCCeEEE-EEEeeeeee
Q 046541 3 LQRYIKQYN-DIEL------------TALGMAIPTVVTIAEALKRDGLASN-IEVKISTVN 49 (94)
Q Consensus 3 ~Kr~l~~~~-eVeL------------sALG~AI~tvVtvAEiLK~nglAt~-kkI~Tstv~ 49 (94)
+++|+++++ .|++ -||--||.++|+--..|+.|||..+ ..|..|+..
T Consensus 140 ~r~yf~~~gi~~~Ii~l~GsvE~aP~~GlADaIvDiVsTG~TLraNgL~~i~e~I~~SsA~ 200 (304)
T 1nh8_A 140 VRKDLATKGIEATVIRLDGAVEISVQLGVADAIADVVGSGRTLSQHDLVAFGEPLCDSEAV 200 (304)
T ss_dssp HHHHHHHHTCCCEEEECSSCCTHHHHTTSCSEEEEEESSSHHHHHTTEEEEEEEEEEECEE
T ss_pred HHHHHHHCCCeEEEEECCCceeeccCCCcccEEEEEeCChHHHHHCcCEEcccEEEEEEEE
Confidence 578887644 2333 2455678889999999999999999 999888764
No 17
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=44.93 E-value=21 Score=22.44 Aligned_cols=30 Identities=23% Similarity=0.193 Sum_probs=26.1
Q ss_pred CcEEEecccchhhHHHHHHHHhhhCCeEEE
Q 046541 11 NDIELTALGMAIPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 11 ~eVeLsALG~AI~tvVtvAEiLK~nglAt~ 40 (94)
.-|-+||+|......-.+++.|.++|+.++
T Consensus 24 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~ 53 (251)
T 3dkr_A 24 GVVLLHAYTGSPNDMNFMARALQRSGYGVY 53 (251)
T ss_dssp EEEEECCTTCCGGGGHHHHHHHHHTTCEEE
T ss_pred eEEEeCCCCCCHHHHHHHHHHHHHCCCEEE
Confidence 357799999999999999999999999764
No 18
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=41.97 E-value=39 Score=21.82 Aligned_cols=72 Identities=15% Similarity=0.228 Sum_probs=43.8
Q ss_pred hhcCcEEEecccchhhHHHHHHHHhhhCCe-EEEEEEeeeeeeecCCCCCCcccceeEEEEEeec--cchHHHHhh
Q 046541 8 KQYNDIELTALGMAIPTVVTIAEALKRDGL-ASNIEVKISTVNSKKDDEGRFFQKAKIQIVLGKA--EKLEKAVVA 80 (94)
Q Consensus 8 ~~~~eVeLsALG~AI~tvVtvAEiLK~ngl-At~kkI~Tstv~~~~~~~gr~~qKaKIeI~L~Ks--~~FD~~~a~ 80 (94)
.+..++-|=+.|.....+..+++.|..+|+ +.+-++++-.. ++.+.--+..++.|-.|+++.. ..|-+.+..
T Consensus 11 ~~g~dv~iv~~Gs~~~~a~eA~~~L~~~Gi~v~vi~~r~~~P-~d~~~l~~~~~~~~~vvvvE~~~~G~l~~~i~~ 85 (118)
T 3ju3_A 11 EKEADITFVTWGSQKGPILDVIEDLKEEGISANLLYLKMFSP-FPTEFVKNVLSSANLVIDVESNYTAQAAQMIKL 85 (118)
T ss_dssp CSSCSEEEEEEGGGHHHHHHHHHHHHHTTCCEEEEEECSSCS-CCHHHHHHHHTTCSCCCCCCCCCCCCHHHHHHH
T ss_pred CCCCCEEEEEECccHHHHHHHHHHHHHCCCceEEEEECeEec-CCHHHHHHHHcCCCEEEEEECCCCCcHHHHHHH
Confidence 345688999999999999999999999996 55556655332 1111000122344444555443 456555543
No 19
>1s03_H 30S ribosomal protein S8; protein-RNA complex, SPC operon, transcription-RN; 2.70A {Escherichia coli} SCOP: d.140.1.1 PDB: 1p6g_H 1p87_H 2avy_H 2aw7_H 2i2p_H 2i2u_H 2qal_H* 2qan_H* 2qb9_H* 2qbb_H* 2qbd_H 2qbf_H 2qbh_H* 2qbj_H* 2qou_H* 2qow_H* 2qoy_H* 2qp0_H* 2vho_H 2vhp_H ...
Probab=40.25 E-value=85 Score=21.32 Aligned_cols=33 Identities=21% Similarity=0.339 Sum_probs=25.5
Q ss_pred hhhcCcEEEecccchhhHHHHHHHHhhhCCeEEEEEE
Q 046541 7 IKQYNDIELTALGMAIPTVVTIAEALKRDGLASNIEV 43 (94)
Q Consensus 7 l~~~~eVeLsALG~AI~tvVtvAEiLK~nglAt~kkI 43 (94)
+..|..|.+ -+-...+.++++|++.||+-.=.+
T Consensus 18 ~~~~~~v~i----P~Sk~~~~il~iL~~eGyI~~~~~ 50 (129)
T 1s03_H 18 AANKAAVTM----PSSKLKVAIANVLKEEGFIEDFKV 50 (129)
T ss_dssp HTTCSEEEE----ECCHHHHHHHHHHHHTTSEEEEEE
T ss_pred HcCCCEEEE----eCcHHHHHHHHHHHHCCcceeEEE
Confidence 456777775 466778999999999999766554
No 20
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=36.37 E-value=44 Score=24.82 Aligned_cols=38 Identities=24% Similarity=0.524 Sum_probs=31.0
Q ss_pred hhcCcEEEecccchhhHHHHHHHHhhhCCe-EEEEEEee
Q 046541 8 KQYNDIELTALGMAIPTVVTIAEALKRDGL-ASNIEVKI 45 (94)
Q Consensus 8 ~~~~eVeLsALG~AI~tvVtvAEiLK~ngl-At~kkI~T 45 (94)
.+-.+|-|=|.|.....+..+||.|+.+|+ +.+-+++|
T Consensus 200 ~~g~dv~iva~G~~~~~a~~Aa~~L~~~Gi~v~vi~~~~ 238 (324)
T 1umd_B 200 REGKDLTLICYGTVMPEVLQAAAELAKAGVSAEVLDLRT 238 (324)
T ss_dssp ECCSSEEEEECGGGHHHHHHHHHHHHHTTCCEEEEECCE
T ss_pred ecCCCEEEEEecHHHHHHHHHHHHHHhcCCCEEEEEece
Confidence 445789999999999999999999999996 44555554
No 21
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=35.96 E-value=31 Score=23.62 Aligned_cols=29 Identities=14% Similarity=0.139 Sum_probs=25.2
Q ss_pred cEEEecccchhhHHHHHHHHhhhCCeEEE
Q 046541 12 DIELTALGMAIPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 12 eVeLsALG~AI~tvVtvAEiLK~nglAt~ 40 (94)
-|=|||+|..-...-.+|+-|.++||.++
T Consensus 54 VlllHG~~~s~~~~~~la~~La~~Gy~Vi 82 (281)
T 4fbl_A 54 VLVSHGFTGSPQSMRFLAEGFARAGYTVA 82 (281)
T ss_dssp EEEECCTTCCGGGGHHHHHHHHHTTCEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCEEE
Confidence 47789999888888899999999999875
No 22
>1sei_A Ribosomal protein S8; prokaryotic, rRNA-binding; 1.90A {Geobacillus stearothermophilus} SCOP: d.140.1.1
Probab=34.82 E-value=1.1e+02 Score=20.84 Aligned_cols=33 Identities=30% Similarity=0.388 Sum_probs=25.3
Q ss_pred hhhcCcEEEecccchhhHHHHHHHHhhhCCeEEEEEE
Q 046541 7 IKQYNDIELTALGMAIPTVVTIAEALKRDGLASNIEV 43 (94)
Q Consensus 7 l~~~~eVeLsALG~AI~tvVtvAEiLK~nglAt~kkI 43 (94)
+.+|..|.+ -+-...+.++++|++.||+-.=.+
T Consensus 18 ~~~~~~v~i----P~Sk~~~~il~iL~~eGyI~~~~~ 50 (130)
T 1sei_A 18 MVRHEKLEV----PASKIKREIAEILKREGFIRDYEY 50 (130)
T ss_dssp HTTCSEEEE----ECCHHHHHHHHHHHHTTSEEEEEE
T ss_pred HcCCCEEEe----cCcHHHHHHHHHHHHCCCceeEEE
Confidence 456777775 466778999999999999765553
No 23
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=34.73 E-value=39 Score=21.66 Aligned_cols=29 Identities=14% Similarity=-0.105 Sum_probs=24.9
Q ss_pred cEEEecccchhhHHHHHHHHhhhCCeEEE
Q 046541 12 DIELTALGMAIPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 12 eVeLsALG~AI~tvVtvAEiLK~nglAt~ 40 (94)
-|-+||+|......-.+++.|.++|+.++
T Consensus 45 vv~~hG~~~~~~~~~~~~~~l~~~g~~v~ 73 (303)
T 3pe6_A 45 IFVSHGAGEHSGRYEELARMLMGLDLLVF 73 (303)
T ss_dssp EEEECCTTCCGGGGHHHHHHHHHTTEEEE
T ss_pred EEEECCCCchhhHHHHHHHHHHhCCCcEE
Confidence 45689999999889999999999998764
No 24
>1qwi_A OSMC, osmotically inducible protein; hydroperoxide resistance, hydroperoxide reductase; 1.80A {Escherichia coli} SCOP: d.227.1.1
Probab=33.68 E-value=13 Score=24.61 Aligned_cols=66 Identities=15% Similarity=0.196 Sum_probs=35.6
Q ss_pred EEecccchhhHHHHHHHHhhhCCeEEEEEEe-eeeeeecCCCCCCcccceeEEEEEeec----cchHHHHhh
Q 046541 14 ELTALGMAIPTVVTIAEALKRDGLASNIEVK-ISTVNSKKDDEGRFFQKAKIQIVLGKA----EKLEKAVVA 80 (94)
Q Consensus 14 eLsALG~AI~tvVtvAEiLK~nglAt~kkI~-Tstv~~~~~~~gr~~qKaKIeI~L~Ks----~~FD~~~a~ 80 (94)
||=+.+.|--...++.-+|+++|+-.. .++ +-++++..+..|..+.+..|.+.+.-+ +.++++.+.
T Consensus 50 eLllaala~C~~~~~~~~a~~~g~~~~-~~~v~~~~~~~~~~~g~~~t~I~l~~~v~~~~~~~e~~~~l~~~ 120 (143)
T 1qwi_A 50 ELIGAAHAACFSMALSLMLGEAGFTPT-SIDTTADVSLDKVDAGFAITKIALKSEVAVPGIDASTFDGIIQK 120 (143)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCS-EEEEEEEEEEEEETTEEEEEEEEEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCc-eEEEEEEEEEEecCCCcEEEEEEEEEEEEeCCCCHHHHHHHHHH
Confidence 444444455556778889999999854 332 344555444344334444455555433 334455443
No 25
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=33.08 E-value=48 Score=23.03 Aligned_cols=30 Identities=7% Similarity=0.001 Sum_probs=26.2
Q ss_pred cEEEecccchhhHHHHHHHHhhhCCeEEEE
Q 046541 12 DIELTALGMAIPTVVTIAEALKRDGLASNI 41 (94)
Q Consensus 12 eVeLsALG~AI~tvVtvAEiLK~nglAt~k 41 (94)
-|-+||.|......-.+++.|.++|++++-
T Consensus 99 vv~~HG~~~~~~~~~~~~~~la~~G~~vv~ 128 (306)
T 3vis_A 99 IAISPGYTGTQSSIAWLGERIASHGFVVIA 128 (306)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHTTTEEEEE
T ss_pred EEEeCCCcCCHHHHHHHHHHHHhCCCEEEE
Confidence 477899998888889999999999998763
No 26
>1nye_A Osmotically inducible protein C; OSMC, structural genomics, peroxiredoxin, BSGC structure funded by NIH, protein structure initiative, PSI; 2.40A {Escherichia coli} SCOP: d.227.1.1
Probab=32.37 E-value=17 Score=24.92 Aligned_cols=67 Identities=15% Similarity=0.138 Sum_probs=36.4
Q ss_pred EEecccchhhHHHHHHHHhhhCCeEEEEEEeeeeeeecCCCCCCcccceeEEEEEeec----cchHHHHhh
Q 046541 14 ELTALGMAIPTVVTIAEALKRDGLASNIEVKISTVNSKKDDEGRFFQKAKIQIVLGKA----EKLEKAVVA 80 (94)
Q Consensus 14 eLsALG~AI~tvVtvAEiLK~nglAt~kkI~Tstv~~~~~~~gr~~qKaKIeI~L~Ks----~~FD~~~a~ 80 (94)
||=+.|.|--...++.-+|+++|+.+..=--+.++++..+..|..+.+..+.+.+.-+ +.++++.+.
T Consensus 69 eLllaalaaC~~~~l~~~a~~~gi~~~~~~v~~~~~~~~~~~g~~~t~I~l~~~v~~~g~~~e~~~~l~~~ 139 (162)
T 1nye_A 69 ELIGAAHAACFSMALSLMLGEAGFTPTSIDTTADVSLDKVDAGFAITKIALKSEVAVPGIDASTFDGIIQK 139 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCCCSEEEEEEEEEEEEETTEEEEEEEEEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCceEEEEEEEEEEecCCCcEEEEEEEEEEEEECCCCHHHHHHHHHH
Confidence 4444455555667888899999998543223345555444444334443444444433 344455543
No 27
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=30.37 E-value=43 Score=24.91 Aligned_cols=38 Identities=21% Similarity=0.476 Sum_probs=30.9
Q ss_pred hhcCcEEEecccchhhHHHHHHHHhhhCCe-EEEEEEee
Q 046541 8 KQYNDIELTALGMAIPTVVTIAEALKRDGL-ASNIEVKI 45 (94)
Q Consensus 8 ~~~~eVeLsALG~AI~tvVtvAEiLK~ngl-At~kkI~T 45 (94)
.+-.+|-|=|.|.....+..+|+.|+++|+ +.+-+++|
T Consensus 199 ~~g~dv~iva~G~~~~~a~~Aa~~L~~~Gi~v~vi~~~~ 237 (324)
T 1w85_B 199 REGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRT 237 (324)
T ss_dssp ECCSSEEEEECTTHHHHHHHHHHHHHHTTCCEEEEECSE
T ss_pred ecCCCEEEEEecHHHHHHHHHHHHHHhcCCCEEEEEeee
Confidence 445789999999999999999999999996 44555554
No 28
>2d7v_A Hypothetical protein VCA0330; MCSG, structural genomics, hypothetial PROT protein structure initiative; 1.97A {Vibrio cholerae o1 biovar eltor} SCOP: d.227.1.1
Probab=28.50 E-value=63 Score=21.82 Aligned_cols=62 Identities=10% Similarity=0.035 Sum_probs=34.0
Q ss_pred cchhhHHHHHHHHhhhCCeEEEEEEeee-eeeecCCCCC-CcccceeEEEEEeec-------cchHHHHhhc
Q 046541 19 GMAIPTVVTIAEALKRDGLASNIEVKIS-TVNSKKDDEG-RFFQKAKIQIVLGKA-------EKLEKAVVAT 81 (94)
Q Consensus 19 G~AI~tvVtvAEiLK~nglAt~kkI~Ts-tv~~~~~~~g-r~~qKaKIeI~L~Ks-------~~FD~~~a~~ 81 (94)
|.|--...++.-++++.|+.+. .+.+. ...+..+..| ..+.+..+.+.+.-+ +.++++.+..
T Consensus 72 alaaC~~~~~~~~a~~~g~~~~-~~~~~~~~~~~~~~~g~~~~~~i~l~~~v~~~g~~~~~~e~~~~l~~~a 142 (162)
T 2d7v_A 72 ALSSCHMLVFLSIAAKQRYLVE-SYTDNAVGILGKNSKGKTSVTKVVLRPQVVFSGTSKPTLQQLEKMHHLA 142 (162)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEE-EEEEEEEEEEEECTTSCEEEEEEEECEEEEEESSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCcc-eEEEEEEEEEeecCCCCceEEEEEEEEEEEECCCCCCCHHHHHHHHHHH
Confidence 3344456778899999999876 55544 3344433333 234444443333322 3466666544
No 29
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=28.50 E-value=50 Score=21.38 Aligned_cols=29 Identities=14% Similarity=0.142 Sum_probs=25.3
Q ss_pred cEEEecccchhhHHHHHHHHhhhCCeEEE
Q 046541 12 DIELTALGMAIPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 12 eVeLsALG~AI~tvVtvAEiLK~nglAt~ 40 (94)
-|-|||+|......-.+++.|.++|+.++
T Consensus 43 vv~~HG~~~~~~~~~~~~~~l~~~G~~v~ 71 (270)
T 3rm3_A 43 VLLVHGFTGTPHSMRPLAEAYAKAGYTVC 71 (270)
T ss_dssp EEEECCTTCCGGGTHHHHHHHHHTTCEEE
T ss_pred EEEECCCCCChhHHHHHHHHHHHCCCEEE
Confidence 47789999988888899999999998764
No 30
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=27.83 E-value=52 Score=20.77 Aligned_cols=30 Identities=13% Similarity=-0.012 Sum_probs=25.8
Q ss_pred cEEEecccchhhHHHHHHHHhhhCCeEEEE
Q 046541 12 DIELTALGMAIPTVVTIAEALKRDGLASNI 41 (94)
Q Consensus 12 eVeLsALG~AI~tvVtvAEiLK~nglAt~k 41 (94)
-|-|||.|......-.+++-|.++|+.++-
T Consensus 26 vv~lHG~~~~~~~~~~~~~~l~~~g~~v~~ 55 (232)
T 1fj2_A 26 VIFLHGLGDTGHGWAEAFAGIRSSHIKYIC 55 (232)
T ss_dssp EEEECCSSSCHHHHHHHHHTTCCTTEEEEE
T ss_pred EEEEecCCCccchHHHHHHHHhcCCcEEEe
Confidence 377899999888888999999999998764
No 31
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=27.69 E-value=64 Score=20.45 Aligned_cols=29 Identities=10% Similarity=0.093 Sum_probs=24.0
Q ss_pred cEEEecccchhhHHHHHHHHhhhCCeEEE
Q 046541 12 DIELTALGMAIPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 12 eVeLsALG~AI~tvVtvAEiLK~nglAt~ 40 (94)
-|-+||.|.--.....+++.|.++|+.++
T Consensus 35 vv~~HG~~g~~~~~~~~~~~l~~~G~~v~ 63 (241)
T 3f67_A 35 VIVVQEIFGVHEHIRDLCRRLAQEGYLAI 63 (241)
T ss_dssp EEEECCTTCSCHHHHHHHHHHHHTTCEEE
T ss_pred EEEEcCcCccCHHHHHHHHHHHHCCcEEE
Confidence 36688887777788999999999999875
No 32
>2w5v_A Alkaline phosphatase; psychrophiles, cold adaptation, hydrolase; HET: SEP; 1.78A {Antarctic bacterium TAB5} PDB: 2w5w_A* 2w5x_A* 2iuc_A 2iuc_B
Probab=26.77 E-value=21 Score=26.79 Aligned_cols=17 Identities=18% Similarity=0.272 Sum_probs=15.0
Q ss_pred HHHHHHHHhhhCCeEEE
Q 046541 24 TVVTIAEALKRDGLASN 40 (94)
Q Consensus 24 tvVtvAEiLK~nglAt~ 40 (94)
...|++|.||++||.|-
T Consensus 110 ~~~tl~e~lk~~GY~T~ 126 (375)
T 2w5v_A 110 AVKSIVEIAALNNIKTG 126 (375)
T ss_dssp BCCCHHHHHHHTTCEEE
T ss_pred ccCCHHHHHHHCCCeEE
Confidence 57899999999999874
No 33
>1vla_A Hydroperoxide resistance protein OSMC; TM0919, structural GE JCSG, protein structure initiative, PSI, joint center for S genomics; HET: MSE; 1.80A {Thermotoga maritima} SCOP: d.227.1.2
Probab=26.67 E-value=70 Score=21.36 Aligned_cols=61 Identities=18% Similarity=0.260 Sum_probs=33.0
Q ss_pred ccchhhHHHHHHHHhhhCC--eEEEEEEee-eeeeecCCCCCCcccceeEEEEEeec-----cchHHHHhh
Q 046541 18 LGMAIPTVVTIAEALKRDG--LASNIEVKI-STVNSKKDDEGRFFQKAKIQIVLGKA-----EKLEKAVVA 80 (94)
Q Consensus 18 LG~AI~tvVtvAEiLK~ng--lAt~kkI~T-stv~~~~~~~gr~~qKaKIeI~L~Ks-----~~FD~~~a~ 80 (94)
.+.|--...++.-+++++| +-.. .++. -++++.++.++ .+++-.+.+.+.-+ +.+.++.+.
T Consensus 56 aAlaaC~~~~~~~~a~~~g~~~~~~-~~~v~v~~~~~~~~~~-~~~~I~~~~~v~~~~~~~~e~~~~l~~~ 124 (150)
T 1vla_A 56 TGLMGCTGMDVVSILRKMKVIDQMK-DFRIEIEYERTEEHPR-IFTKVHLKYIFKFDGEPPKDKVEKAVQL 124 (150)
T ss_dssp HHHHHHHHHHHHHHHHHTTCGGGEE-EEEEEEEEEECSSSSC-CEEEEEEEEEEEESSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCccee-EEEEEEEEEECCCCCC-ceEEEEEEEEEEeCCCCCHHHHHHHHHH
Confidence 3344445567778899999 7744 4433 44455443332 25555555655422 235555553
No 34
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=26.58 E-value=60 Score=21.06 Aligned_cols=29 Identities=10% Similarity=0.021 Sum_probs=25.6
Q ss_pred cEEEecccchhhHHHHHHHHhhhCCeEEE
Q 046541 12 DIELTALGMAIPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 12 eVeLsALG~AI~tvVtvAEiLK~nglAt~ 40 (94)
-|-|||+|......-.+++.|.++|+.++
T Consensus 49 vv~~hG~~~~~~~~~~~~~~l~~~g~~v~ 77 (315)
T 4f0j_A 49 ILLMHGKNFCAGTWERTIDVLADAGYRVI 77 (315)
T ss_dssp EEEECCTTCCGGGGHHHHHHHHHTTCEEE
T ss_pred EEEEcCCCCcchHHHHHHHHHHHCCCeEE
Confidence 57899999999999999999999998765
No 35
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=26.50 E-value=70 Score=21.14 Aligned_cols=29 Identities=14% Similarity=0.153 Sum_probs=24.6
Q ss_pred cEEEecccchhhHHHHHHHHhhhCCeEEE
Q 046541 12 DIELTALGMAIPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 12 eVeLsALG~AI~tvVtvAEiLK~nglAt~ 40 (94)
-|-|||+|......-.+++-|.++|+-++
T Consensus 19 vvllHG~~~~~~~~~~~~~~L~~~g~~vi 47 (247)
T 1tqh_A 19 VLLLHGFTGNSADVRMLGRFLESKGYTCH 47 (247)
T ss_dssp EEEECCTTCCTHHHHHHHHHHHHTTCEEE
T ss_pred EEEECCCCCChHHHHHHHHHHHHCCCEEE
Confidence 47889999888888889999999998553
No 36
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=26.41 E-value=62 Score=20.66 Aligned_cols=30 Identities=10% Similarity=-0.037 Sum_probs=25.6
Q ss_pred CcEEEecccchhhHHHHHHHHhhhCCeEEE
Q 046541 11 NDIELTALGMAIPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 11 ~eVeLsALG~AI~tvVtvAEiLK~nglAt~ 40 (94)
.-|-|||+|......-.+++.|.++|+.++
T Consensus 14 ~vvllHG~~~~~~~~~~~~~~l~~~g~~v~ 43 (267)
T 3sty_A 14 HFVLVHAAFHGAWCWYKIVALMRSSGHNVT 43 (267)
T ss_dssp EEEEECCTTCCGGGGHHHHHHHHHTTCEEE
T ss_pred eEEEECCCCCCcchHHHHHHHHHhcCCeEE
Confidence 457899999999999999999999987653
No 37
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=26.35 E-value=45 Score=22.27 Aligned_cols=29 Identities=10% Similarity=0.027 Sum_probs=25.1
Q ss_pred cEEEecccchhhHHHHHHHHhhhCCeEEE
Q 046541 12 DIELTALGMAIPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 12 eVeLsALG~AI~tvVtvAEiLK~nglAt~ 40 (94)
-|-+||.|......-.+++.|.++|+.++
T Consensus 52 vv~~HG~~~~~~~~~~~~~~l~~~G~~v~ 80 (258)
T 2fx5_A 52 ILWGNGTGAGPSTYAGLLSHWASHGFVVA 80 (258)
T ss_dssp EEEECCTTCCGGGGHHHHHHHHHHTCEEE
T ss_pred EEEECCCCCCchhHHHHHHHHHhCCeEEE
Confidence 36789999988888999999999999775
No 38
>1ml8_A Hypothetical protein (CRP region); structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 2.60A {Escherichia coli} SCOP: d.227.1.2
Probab=26.16 E-value=99 Score=19.74 Aligned_cols=50 Identities=8% Similarity=0.227 Sum_probs=27.8
Q ss_pred cchhhHHHHHHHHhhhCCeEEEEEEee-eeeeecCCCCCCcccceeEEEEEee
Q 046541 19 GMAIPTVVTIAEALKRDGLASNIEVKI-STVNSKKDDEGRFFQKAKIQIVLGK 70 (94)
Q Consensus 19 G~AI~tvVtvAEiLK~nglAt~kkI~T-stv~~~~~~~gr~~qKaKIeI~L~K 70 (94)
+.|--...++.-+++++|+-.. .++. -++++.++.++ .+++-.+.+.+.-
T Consensus 43 ala~C~~~~~~~~a~~~~~~~~-~~~v~v~~~~~~~~~~-~~~~i~~~~~v~~ 93 (134)
T 1ml8_A 43 AAGGCSAIDVVSILQKGRQDVV-DCEVKLTSERREADTR-LFTHINLHFIVTG 93 (134)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEE-EEEEEEEEEECC---C-CEEEEEEEEEEEE
T ss_pred HHhccHHHHHHHHHHHcCCCce-EEEEEEEEEECCCCCC-ceEEEEEEEEEEc
Confidence 3333445677889999999854 4433 44455433222 3556666666654
No 39
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=25.75 E-value=70 Score=20.95 Aligned_cols=29 Identities=21% Similarity=0.217 Sum_probs=24.3
Q ss_pred cEEEecccch--hhHHHHHHHHhhhCCeEEE
Q 046541 12 DIELTALGMA--IPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 12 eVeLsALG~A--I~tvVtvAEiLK~nglAt~ 40 (94)
-|-|||.|.. ......+++-|.++|+.++
T Consensus 30 vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi 60 (251)
T 2wtm_A 30 CIIIHGFTGHSEERHIVAVQETLNEIGVATL 60 (251)
T ss_dssp EEEECCTTCCTTSHHHHHHHHHHHHTTCEEE
T ss_pred EEEEcCCCcccccccHHHHHHHHHHCCCEEE
Confidence 4678999988 7778889999999999765
No 40
>1b8z_A Protein (histonelike protein HU); thermostable DNA binding protein; 1.60A {Thermotoga maritima} SCOP: a.55.1.1 PDB: 1riy_A
Probab=25.66 E-value=29 Score=21.29 Aligned_cols=18 Identities=6% Similarity=0.233 Sum_probs=14.1
Q ss_pred HhhhhhcCcEEEecccch
Q 046541 4 QRYIKQYNDIELTALGMA 21 (94)
Q Consensus 4 Kr~l~~~~eVeLsALG~A 21 (94)
...|.+.+.|+|.|+|.=
T Consensus 33 ~~~L~~g~~V~l~gfG~F 50 (90)
T 1b8z_A 33 TEALAKGEKVQIVGFGSF 50 (90)
T ss_dssp HHHHHTTCCEEETTTEEE
T ss_pred HHHHhCCCEEEECCCEEE
Confidence 456788888999999863
No 41
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=25.52 E-value=77 Score=19.19 Aligned_cols=29 Identities=21% Similarity=0.173 Sum_probs=21.9
Q ss_pred cEEEecccchhh--HHHHHHHHhhhCCeEEE
Q 046541 12 DIELTALGMAIP--TVVTIAEALKRDGLASN 40 (94)
Q Consensus 12 eVeLsALG~AI~--tvVtvAEiLK~nglAt~ 40 (94)
-|-+||.|.... ....+++.|.++|+.++
T Consensus 7 vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~ 37 (176)
T 2qjw_A 7 CILAHGFESGPDALKVTALAEVAERLGWTHE 37 (176)
T ss_dssp EEEECCTTCCTTSHHHHHHHHHHHHTTCEEE
T ss_pred EEEEeCCCCCccHHHHHHHHHHHHHCCCEEE
Confidence 467899986554 45589999999997654
No 42
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=25.49 E-value=30 Score=21.68 Aligned_cols=29 Identities=10% Similarity=0.115 Sum_probs=24.8
Q ss_pred cEEEecccchhhHHHHHHHHhhhCCeEEE
Q 046541 12 DIELTALGMAIPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 12 eVeLsALG~AI~tvVtvAEiLK~nglAt~ 40 (94)
-|-+||.|........+++.|.++|+.++
T Consensus 27 vv~~hG~~~~~~~~~~~~~~l~~~G~~v~ 55 (238)
T 1ufo_A 27 LLALHGLQGSKEHILALLPGYAERGFLLL 55 (238)
T ss_dssp EEEECCTTCCHHHHHHTSTTTGGGTEEEE
T ss_pred EEEECCCcccchHHHHHHHHHHhCCCEEE
Confidence 36789999988888889999999998764
No 43
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=25.22 E-value=80 Score=23.90 Aligned_cols=39 Identities=15% Similarity=0.285 Sum_probs=31.4
Q ss_pred hhhcCcEEEecccchhhHHHHHHHHhhhCCe-EEEEEEee
Q 046541 7 IKQYNDIELTALGMAIPTVVTIAEALKRDGL-ASNIEVKI 45 (94)
Q Consensus 7 l~~~~eVeLsALG~AI~tvVtvAEiLK~ngl-At~kkI~T 45 (94)
+.+-.+|-|=+.|.-...+..+++.|+.+|. +.+-+++|
T Consensus 213 ~~~g~dv~iia~Gs~~~~a~~Aa~~L~~~Gi~v~vv~~~~ 252 (341)
T 2ozl_B 213 ERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRT 252 (341)
T ss_dssp EECCSSEEEEECSTHHHHHHHHHHHHHTTTCCEEEEECCE
T ss_pred eccCCCEEEEEeCHHHHHHHHHHHHHHhcCCCeEEEeeee
Confidence 3445789999999999999999999999986 45555554
No 44
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=25.02 E-value=80 Score=19.92 Aligned_cols=29 Identities=10% Similarity=-0.101 Sum_probs=24.7
Q ss_pred cEEEecccchhhHHHHHHHHhhhCCeEEE
Q 046541 12 DIELTALGMAIPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 12 eVeLsALG~AI~tvVtvAEiLK~nglAt~ 40 (94)
-|-+||.|..-.....+++-|.++|+.++
T Consensus 31 vv~~hG~~~~~~~~~~~~~~l~~~g~~v~ 59 (236)
T 1zi8_A 31 IVIAQDIFGVNAFMRETVSWLVDQGYAAV 59 (236)
T ss_dssp EEEECCTTBSCHHHHHHHHHHHHTTCEEE
T ss_pred EEEEcCCCCCCHHHHHHHHHHHhCCcEEE
Confidence 37789988888888899999999999864
No 45
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=24.88 E-value=63 Score=22.05 Aligned_cols=29 Identities=10% Similarity=0.070 Sum_probs=18.7
Q ss_pred EEEecccch--hhHHHHHHHHhhhCCeEEEE
Q 046541 13 IELTALGMA--IPTVVTIAEALKRDGLASNI 41 (94)
Q Consensus 13 VeLsALG~A--I~tvVtvAEiLK~nglAt~k 41 (94)
|-+||.|.. -.....+|+.|-++||++.-
T Consensus 60 l~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~ 90 (259)
T 4ao6_A 60 LLGHGGTTHKKVEYIEQVAKLLVGRGISAMA 90 (259)
T ss_dssp EEEC--------CHHHHHHHHHHHTTEEEEE
T ss_pred EEeCCCcccccchHHHHHHHHHHHCCCeEEe
Confidence 445888765 34678899999999999873
No 46
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=24.62 E-value=54 Score=21.65 Aligned_cols=29 Identities=10% Similarity=-0.070 Sum_probs=25.0
Q ss_pred cEEEecccchhhHHHHHHHHhhhCCeEEE
Q 046541 12 DIELTALGMAIPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 12 eVeLsALG~AI~tvVtvAEiLK~nglAt~ 40 (94)
-|-|||.|........+++-|.++|+.++
T Consensus 31 vv~~HG~~~~~~~~~~~~~~l~~~g~~v~ 59 (290)
T 3ksr_A 31 VLFVHGWGGSQHHSLVRAREAVGLGCICM 59 (290)
T ss_dssp EEEECCTTCCTTTTHHHHHHHHTTTCEEE
T ss_pred EEEeCCCCCCcCcHHHHHHHHHHCCCEEE
Confidence 46789999988889999999999998753
No 47
>2o97_B NS1, HU-1, DNA-binding protein HU-beta; heterodimer, DNA structure, DNA supercoiling, E DNA binding protein; 2.45A {Escherichia coli} SCOP: a.55.1.1
Probab=24.40 E-value=31 Score=21.24 Aligned_cols=17 Identities=24% Similarity=0.485 Sum_probs=13.0
Q ss_pred HhhhhhcCcEEEecccc
Q 046541 4 QRYIKQYNDIELTALGM 20 (94)
Q Consensus 4 Kr~l~~~~eVeLsALG~ 20 (94)
...|.+.+.|+|.|+|.
T Consensus 33 ~~~L~~g~~V~l~gfG~ 49 (90)
T 2o97_B 33 TESLKEGDDVALVGFGT 49 (90)
T ss_dssp HHHHHTTCCEEETTTEE
T ss_pred HHHHHCCCeEEECCCEE
Confidence 35677788888888884
No 48
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=24.36 E-value=60 Score=23.04 Aligned_cols=29 Identities=14% Similarity=0.166 Sum_probs=25.7
Q ss_pred cEEEecccchhhHHHHHHHHhhhCCeEEE
Q 046541 12 DIELTALGMAIPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 12 eVeLsALG~AI~tvVtvAEiLK~nglAt~ 40 (94)
-|-|||+|........+++-|.++|+.++
T Consensus 38 VvllHG~g~~~~~~~~~~~~L~~~G~~Vi 66 (305)
T 1tht_A 38 ILIASGFARRMDHFAGLAEYLSTNGFHVF 66 (305)
T ss_dssp EEEECTTCGGGGGGHHHHHHHHTTTCCEE
T ss_pred EEEecCCccCchHHHHHHHHHHHCCCEEE
Confidence 47899999988888999999999998765
No 49
>2onf_A Hypothetical protein TA0195; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE COA; 1.70A {Thermoplasma acidophilum} SCOP: d.227.1.1
Probab=24.36 E-value=1.1e+02 Score=19.56 Aligned_cols=61 Identities=23% Similarity=0.207 Sum_probs=31.2
Q ss_pred cchhhHHHHHHHHhhhCCeEEEEEEee-eeeeecCCCCC-CcccceeEEEEEeec----cchHHHHhh
Q 046541 19 GMAIPTVVTIAEALKRDGLASNIEVKI-STVNSKKDDEG-RFFQKAKIQIVLGKA----EKLEKAVVA 80 (94)
Q Consensus 19 G~AI~tvVtvAEiLK~nglAt~kkI~T-stv~~~~~~~g-r~~qKaKIeI~L~Ks----~~FD~~~a~ 80 (94)
+.|--...++.-+++++|+-+ ..++. -++++..+..+ +.+++-.+.+.+.-+ ++++++.+.
T Consensus 50 ala~C~~~~~~~~a~~~g~~~-~~~~v~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~e~~~~l~~~ 116 (140)
T 2onf_A 50 VLASCLLTTFLEFKDRMGINL-KSWNSHVTAELGPSPEKGFKFHRIKIHVKIGVNDEDKEKIPRAMQL 116 (140)
T ss_dssp HHHHHHHHHHHHHHHHTTCCE-EEEEEEEEEEEEECTTSSEEEEEEEEEEEEEECGGGGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCc-eEEEEEEEEEEeeCCCCCceEEEEEEEEEEEeCCCCHHHHHHHHHH
Confidence 333345566778999999986 34433 33444332222 234444444444322 445555544
No 50
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=24.11 E-value=28 Score=27.61 Aligned_cols=30 Identities=23% Similarity=0.453 Sum_probs=23.1
Q ss_pred EecccchhhHHHHHHHHhhhCCeE-EEEEEee
Q 046541 15 LTALGMAIPTVVTIAEALKRDGLA-SNIEVKI 45 (94)
Q Consensus 15 LsALG~AI~tvVtvAEiLK~nglA-t~kkI~T 45 (94)
+|+||-+|.. -+++-+||+.||- +..||--
T Consensus 33 vS~lGKGi~a-aSlg~lLk~~G~~Vt~~K~DP 63 (295)
T 2vo1_A 33 ISGIGKGIIA-SSVGTILKSCGLHVTSIKIDP 63 (295)
T ss_dssp SSSSSHHHHH-HHHHHHHHHTTCCEEEEEEEC
T ss_pred ccccccHHHH-HHHHHHHHHCCCcceeeeccc
Confidence 4779999965 5799999999994 4556543
No 51
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=23.74 E-value=65 Score=20.07 Aligned_cols=30 Identities=27% Similarity=0.170 Sum_probs=25.8
Q ss_pred cEEEecccchhhHHHHHHHHhhh--CCeEEEE
Q 046541 12 DIELTALGMAIPTVVTIAEALKR--DGLASNI 41 (94)
Q Consensus 12 eVeLsALG~AI~tvVtvAEiLK~--nglAt~k 41 (94)
-|-|||.|........+++.|.+ +|+.++-
T Consensus 17 vv~~HG~~~~~~~~~~~~~~l~~~~~g~~v~~ 48 (218)
T 1auo_A 17 VIWLHGLGADRYDFMPVAEALQESLLTTRFVL 48 (218)
T ss_dssp EEEECCTTCCTTTTHHHHHHHHTTCTTEEEEE
T ss_pred EEEEecCCCChhhHHHHHHHHhhcCCceEEEe
Confidence 36789999988888999999998 9998764
No 52
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=23.74 E-value=58 Score=27.05 Aligned_cols=28 Identities=21% Similarity=0.351 Sum_probs=26.2
Q ss_pred CcEEEecccchhhHHHHHHHHhhhCCeE
Q 046541 11 NDIELTALGMAIPTVVTIAEALKRDGLA 38 (94)
Q Consensus 11 ~eVeLsALG~AI~tvVtvAEiLK~nglA 38 (94)
++|-|=|.|.-+..++.+||.|+.+|.-
T Consensus 550 ~dv~iva~G~~v~~al~Aa~~L~~~Gi~ 577 (669)
T 2r8o_A 550 PELIFIATGSEVELAVAAYEKLTAEGVK 577 (669)
T ss_dssp CSEEEEECGGGHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEEECHHHHHHHHHHHHHHhcCCC
Confidence 7999999999999999999999999864
No 53
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=23.71 E-value=67 Score=26.56 Aligned_cols=28 Identities=18% Similarity=0.234 Sum_probs=26.2
Q ss_pred CcEEEecccchhhHHHHHHHHhhhCCeE
Q 046541 11 NDIELTALGMAIPTVVTIAEALKRDGLA 38 (94)
Q Consensus 11 ~eVeLsALG~AI~tvVtvAEiLK~nglA 38 (94)
.+|-|-|.|.-...++.+|++|+.+|+-
T Consensus 542 ~dv~iva~G~~v~~al~Aa~~L~~~Gi~ 569 (651)
T 2e6k_A 542 PQGVLVATGSEVHLALRAQALLREKGVR 569 (651)
T ss_dssp CSEEEEECTTHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEEECHHHHHHHHHHHHHHhcCCc
Confidence 6999999999999999999999999864
No 54
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=23.66 E-value=28 Score=23.56 Aligned_cols=28 Identities=21% Similarity=0.344 Sum_probs=24.7
Q ss_pred EEEecccchhhHHHHHHHHhhhCCeEEE
Q 046541 13 IELTALGMAIPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 13 VeLsALG~AI~tvVtvAEiLK~nglAt~ 40 (94)
|-|||+|.--.....+++.|..+|++++
T Consensus 26 v~lHG~G~~~~~~~~l~~~l~~~~~~v~ 53 (210)
T 4h0c_A 26 VMLHGRGGTAADIISLQKVLKLDEMAIY 53 (210)
T ss_dssp EEECCTTCCHHHHHGGGGTSSCTTEEEE
T ss_pred EEEeCCCCCHHHHHHHHHHhCCCCeEEE
Confidence 7799999888888999999999998875
No 55
>1mul_A NS2, HU-2, DNA binding protein HU-alpha; histone-like; HET: DNA; 2.30A {Escherichia coli} SCOP: a.55.1.1 PDB: 2o97_A
Probab=23.59 E-value=34 Score=21.05 Aligned_cols=17 Identities=18% Similarity=0.421 Sum_probs=13.0
Q ss_pred HhhhhhcCcEEEecccc
Q 046541 4 QRYIKQYNDIELTALGM 20 (94)
Q Consensus 4 Kr~l~~~~eVeLsALG~ 20 (94)
...|.+.+.|+|.|+|.
T Consensus 33 ~~~L~~g~~V~l~gfG~ 49 (90)
T 1mul_A 33 TESLKEGDAVQLVGFGT 49 (90)
T ss_dssp HHHHHTTCCEEETTTEE
T ss_pred HHHHhCCCeEEEcCCeE
Confidence 35677788888888884
No 56
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=23.57 E-value=46 Score=21.15 Aligned_cols=30 Identities=7% Similarity=-0.095 Sum_probs=25.0
Q ss_pred CcEEEecccchhhHHHHHHHHhhhCCeEEE
Q 046541 11 NDIELTALGMAIPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 11 ~eVeLsALG~AI~tvVtvAEiLK~nglAt~ 40 (94)
+-|-|||+|......-.+++.|.++|+.++
T Consensus 6 ~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi 35 (258)
T 3dqz_A 6 HFVLVHNAYHGAWIWYKLKPLLESAGHRVT 35 (258)
T ss_dssp EEEEECCTTCCGGGGTTHHHHHHHTTCEEE
T ss_pred cEEEECCCCCccccHHHHHHHHHhCCCEEE
Confidence 357789999888888889999999998653
No 57
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A*
Probab=23.36 E-value=81 Score=20.13 Aligned_cols=29 Identities=28% Similarity=0.232 Sum_probs=25.3
Q ss_pred EEEecccchhhHHHHHHHHhhh--CCeEEEE
Q 046541 13 IELTALGMAIPTVVTIAEALKR--DGLASNI 41 (94)
Q Consensus 13 VeLsALG~AI~tvVtvAEiLK~--nglAt~k 41 (94)
|-|||.|........+++.|.+ +|+.++-
T Consensus 28 v~lHG~~~~~~~~~~~~~~l~~~~~g~~v~~ 58 (226)
T 3cn9_A 28 IWLHGLGADRTDFKPVAEALQMVLPSTRFIL 58 (226)
T ss_dssp EEECCTTCCGGGGHHHHHHHHHHCTTEEEEE
T ss_pred EEEecCCCChHHHHHHHHHHhhcCCCcEEEe
Confidence 6789999988888999999998 9998764
No 58
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=23.19 E-value=75 Score=26.45 Aligned_cols=28 Identities=18% Similarity=0.394 Sum_probs=26.2
Q ss_pred CcEEEecccchhhHHHHHHHHhhhCCeE
Q 046541 11 NDIELTALGMAIPTVVTIAEALKRDGLA 38 (94)
Q Consensus 11 ~eVeLsALG~AI~tvVtvAEiLK~nglA 38 (94)
++|-|=|.|.-+..++.+||.|+.+|+-
T Consensus 563 ~dv~iva~G~~v~~al~Aa~~L~~~Gi~ 590 (675)
T 1itz_A 563 PDLIVMGTGSELEIAAKAADELRKEGKT 590 (675)
T ss_dssp CSEEEEECGGGHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEEECHHHHHHHHHHHHHHhcCCc
Confidence 6999999999999999999999999864
No 59
>4fdi_A N-acetylgalactosamine-6-sulfatase; glycoprotein, enzyme replacement therapy, formylg N-linked glycosylation, lysosomal enzyme, hydrolase; HET: NAG CIT; 2.20A {Homo sapiens} PDB: 4fdj_A*
Probab=23.16 E-value=26 Score=27.25 Aligned_cols=17 Identities=29% Similarity=0.425 Sum_probs=14.6
Q ss_pred HHHHHHHHhhhCCeEEE
Q 046541 24 TVVTIAEALKRDGLASN 40 (94)
Q Consensus 24 tvVtvAEiLK~nglAt~ 40 (94)
..+|++|+||++||.|.
T Consensus 94 ~~~tl~~~Lk~~GY~T~ 110 (502)
T 4fdi_A 94 SEQLLPELLKKAGYVSK 110 (502)
T ss_dssp TSCCHHHHHGGGTCEEE
T ss_pred ccchHHHHHHhcceeeE
Confidence 45789999999999874
No 60
>2e8e_A Hypothetical protein AQ_1549; osmatically induced protein; 1.70A {Aquifex aeolicus} PDB: 2e8c_A 2e8f_A 2egt_A
Probab=22.97 E-value=1.4e+02 Score=18.92 Aligned_cols=60 Identities=15% Similarity=0.121 Sum_probs=32.1
Q ss_pred chhhHHHHHHHHhhhCCeEEEEEEeeeeeeecCCCCCCcccceeEEEEEeec---cchHHHHhh
Q 046541 20 MAIPTVVTIAEALKRDGLASNIEVKISTVNSKKDDEGRFFQKAKIQIVLGKA---EKLEKAVVA 80 (94)
Q Consensus 20 ~AI~tvVtvAEiLK~nglAt~kkI~Tstv~~~~~~~gr~~qKaKIeI~L~Ks---~~FD~~~a~ 80 (94)
.|--...++.-+++++|+-...=--+-++++.++.++ .+++-.+.+.+.-+ +.++++.+.
T Consensus 42 la~C~~~~~~~~a~~~~~~~~~~~v~v~~~~~~~~~~-~~~~i~~~~~v~~~~~~e~~~~l~~~ 104 (132)
T 2e8e_A 42 IGSCSGVDVYHILKKKRQEVKDIKIFLKGKRREKHPK-IYEEIEIKYVAVGKVEEKALEQAVKL 104 (132)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEEEEEEEECSSSSC-CEEEEEEEEEEEEECCHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHCCCCceEEEEEEEEEECCCCCC-ceEEEEEEEEEeccCCHHHHHHHHHH
Confidence 3333456777889999987543223344555443332 35555555555432 234455544
No 61
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=22.95 E-value=80 Score=20.72 Aligned_cols=30 Identities=7% Similarity=-0.052 Sum_probs=25.2
Q ss_pred CcEEEecccchhhHHHHHHHHhhhCCeEEE
Q 046541 11 NDIELTALGMAIPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 11 ~eVeLsALG~AI~tvVtvAEiLK~nglAt~ 40 (94)
+-|-|||+|......-.+++-|.++|+-++
T Consensus 25 pvvllHG~~~~~~~~~~~~~~L~~~g~~vi 54 (279)
T 1hkh_A 25 PVVLIHGYPLDGHSWERQTRELLAQGYRVI 54 (279)
T ss_dssp EEEEECCTTCCGGGGHHHHHHHHHTTEEEE
T ss_pred cEEEEcCCCchhhHHhhhHHHHHhCCcEEE
Confidence 357899999988888889999999998654
No 62
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=22.77 E-value=60 Score=19.96 Aligned_cols=29 Identities=3% Similarity=-0.091 Sum_probs=24.2
Q ss_pred cEEEecccchhhHHHH--HHHHhhhCCeEEE
Q 046541 12 DIELTALGMAIPTVVT--IAEALKRDGLASN 40 (94)
Q Consensus 12 eVeLsALG~AI~tvVt--vAEiLK~nglAt~ 40 (94)
-|-+||.|........ +++-|.++|+.++
T Consensus 30 vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~ 60 (207)
T 3bdi_A 30 IALFHGYSFTSMDWDKADLFNNYSKIGYNVY 60 (207)
T ss_dssp EEEECCTTCCGGGGGGGTHHHHHHTTTEEEE
T ss_pred EEEECCCCCCccccchHHHHHHHHhCCCeEE
Confidence 3678999988888888 9999999998764
No 63
>1p71_A DNA-binding protein HU; protein-DNA complex, DNA bending, DNA binding protein-DN; 1.90A {Anabaena SP} SCOP: a.55.1.1 PDB: 1p51_A 1p78_A
Probab=22.76 E-value=35 Score=21.18 Aligned_cols=17 Identities=12% Similarity=0.259 Sum_probs=13.4
Q ss_pred HhhhhhcCcEEEecccc
Q 046541 4 QRYIKQYNDIELTALGM 20 (94)
Q Consensus 4 Kr~l~~~~eVeLsALG~ 20 (94)
...|.+.+.|+|.|+|.
T Consensus 33 ~~~L~~g~~V~l~gfG~ 49 (94)
T 1p71_A 33 IEAVSSGDKVTLVGFGS 49 (94)
T ss_dssp HHHHHTTCCEEETTTEE
T ss_pred HHHHhCCCeEEecCCEE
Confidence 45678888899999885
No 64
>3rhi_A DNA-binding protein HU; structural genomics, center for structural genom infectious diseases, csgid; 2.48A {Bacillus anthracis} SCOP: a.55.1.1 PDB: 1hue_A 1huu_A
Probab=22.54 E-value=36 Score=21.23 Aligned_cols=17 Identities=12% Similarity=0.290 Sum_probs=13.3
Q ss_pred HhhhhhcCcEEEecccc
Q 046541 4 QRYIKQYNDIELTALGM 20 (94)
Q Consensus 4 Kr~l~~~~eVeLsALG~ 20 (94)
...|...+.|+|.|+|.
T Consensus 36 ~~~L~~g~~V~l~gfG~ 52 (93)
T 3rhi_A 36 TNTLAAGEKVQLIGFGT 52 (93)
T ss_dssp HHHHHTTCCEEETTTEE
T ss_pred HHHHhCCCEEEEcCCEE
Confidence 45677888899998884
No 65
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=22.33 E-value=84 Score=19.77 Aligned_cols=30 Identities=10% Similarity=-0.073 Sum_probs=25.4
Q ss_pred CcEEEecccchhhHHHHHHHHhhhCCeEEE
Q 046541 11 NDIELTALGMAIPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 11 ~eVeLsALG~AI~tvVtvAEiLK~nglAt~ 40 (94)
.-|-|||+|......-.+++-|.++|+.++
T Consensus 28 ~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~ 57 (286)
T 3qit_A 28 VVLCIHGILEQGLAWQEVALPLAAQGYRVV 57 (286)
T ss_dssp EEEEECCTTCCGGGGHHHHHHHHHTTCEEE
T ss_pred EEEEECCCCcccchHHHHHHHhhhcCeEEE
Confidence 357789999988888899999999998764
No 66
>1p6r_A Penicillinase repressor; transcription regulation, DNA-binding, winged helix protein, bacterial resistance to antibiotics; NMR {Bacillus licheniformis} SCOP: a.4.5.39 PDB: 2p7c_B
Probab=22.15 E-value=75 Score=18.38 Aligned_cols=37 Identities=16% Similarity=0.122 Sum_probs=25.7
Q ss_pred hhhhcCcEEEeccc--------chhhHHHHHHHHhhhCCeEEEEE
Q 046541 6 YIKQYNDIELTALG--------MAIPTVVTIAEALKRDGLASNIE 42 (94)
Q Consensus 6 ~l~~~~eVeLsALG--------~AI~tvVtvAEiLK~nglAt~kk 42 (94)
+|..++.+-.+-|. .+-+++-++...|.+.||+.-.+
T Consensus 17 ~L~~~~~~t~~ei~~~l~~~~~~s~~Tv~~~l~rL~~kGlv~r~~ 61 (82)
T 1p6r_A 17 VIWKHSSINTNEVIKELSKTSTWSPKTIQTMLLRLIKKGALNHHK 61 (82)
T ss_dssp HHHTSSSEEHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHcCCCCCHHHHHHHHhhcCCccHHHHHHHHHHHHHCCCeEEEe
Confidence 34445555444443 34589999999999999997654
No 67
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=22.12 E-value=80 Score=20.77 Aligned_cols=29 Identities=3% Similarity=-0.251 Sum_probs=24.5
Q ss_pred cEEEecccchhhHHHHHHHHhhhCCeEEE
Q 046541 12 DIELTALGMAIPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 12 eVeLsALG~AI~tvVtvAEiLK~nglAt~ 40 (94)
-|-|||+|.....--.+++-|.++|+-++
T Consensus 25 vvllHG~~~~~~~w~~~~~~L~~~g~~vi 53 (276)
T 1zoi_A 25 IHFHHGWPLSADDWDAQLLFFLAHGYRVV 53 (276)
T ss_dssp EEEECCTTCCGGGGHHHHHHHHHTTCEEE
T ss_pred EEEECCCCcchhHHHHHHHHHHhCCCEEE
Confidence 57889999888888889999999998654
No 68
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=21.79 E-value=95 Score=19.95 Aligned_cols=29 Identities=21% Similarity=0.282 Sum_probs=23.4
Q ss_pred cEEEecccch--hhHHHHHHHHhhhCCeEEE
Q 046541 12 DIELTALGMA--IPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 12 eVeLsALG~A--I~tvVtvAEiLK~nglAt~ 40 (94)
-|-|||+|.. ....-.+++.|.++|+.++
T Consensus 49 vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~ 79 (270)
T 3pfb_A 49 AIIFHGFTANRNTSLLREIANSLRDENIASV 79 (270)
T ss_dssp EEEECCTTCCTTCHHHHHHHHHHHHTTCEEE
T ss_pred EEEEcCCCCCccccHHHHHHHHHHhCCcEEE
Confidence 4778999865 5667889999999998765
No 69
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=21.74 E-value=83 Score=20.49 Aligned_cols=30 Identities=7% Similarity=-0.127 Sum_probs=24.9
Q ss_pred CcEEEecccchhhHHHHHHHHhhhCCeEEE
Q 046541 11 NDIELTALGMAIPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 11 ~eVeLsALG~AI~tvVtvAEiLK~nglAt~ 40 (94)
+-|-|||+|......-.+++-|.++|+-++
T Consensus 21 ~vvllHG~~~~~~~~~~~~~~L~~~g~~vi 50 (273)
T 1a8s_A 21 PIVFSHGWPLNADSWESQMIFLAAQGYRVI 50 (273)
T ss_dssp EEEEECCTTCCGGGGHHHHHHHHHTTCEEE
T ss_pred EEEEECCCCCcHHHHhhHHhhHhhCCcEEE
Confidence 357889999888888889999999998664
No 70
>1owf_B IHF-beta, integration HOST factor beta-subunit; protein-DNA recognition, indirect readout, DNA bending, minor groove; 1.95A {Escherichia coli} SCOP: a.55.1.1 PDB: 1ouz_B 2ht0_B 1ihf_B 1owg_B
Probab=21.74 E-value=38 Score=20.96 Aligned_cols=17 Identities=18% Similarity=0.270 Sum_probs=13.2
Q ss_pred HhhhhhcCcEEEecccc
Q 046541 4 QRYIKQYNDIELTALGM 20 (94)
Q Consensus 4 Kr~l~~~~eVeLsALG~ 20 (94)
...|...+.|+|.|+|.
T Consensus 34 ~~~L~~g~~V~l~gfG~ 50 (94)
T 1owf_B 34 ASTLAQGERIAIRGFGS 50 (94)
T ss_dssp HHHHHTTCCEEETTTEE
T ss_pred HHHHhCCCeEEEcCcEE
Confidence 35677888899998884
No 71
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=21.61 E-value=84 Score=26.25 Aligned_cols=36 Identities=17% Similarity=0.246 Sum_probs=30.2
Q ss_pred cCcEEEecccchhhHHHHHHHHhhhCCe-EEEEEEee
Q 046541 10 YNDIELTALGMAIPTVVTIAEALKRDGL-ASNIEVKI 45 (94)
Q Consensus 10 ~~eVeLsALG~AI~tvVtvAEiLK~ngl-At~kkI~T 45 (94)
-++|-|=|.|.-...++.+||.|+.+|. +.+-..+|
T Consensus 525 g~dvtiia~G~~v~~al~Aa~~L~~~Gi~~~Vi~~~~ 561 (632)
T 3l84_A 525 EAKFTLLASGSEVWLCLESANELEKQGFACNVVSMPC 561 (632)
T ss_dssp TCSEEEEECGGGHHHHHHHHHHHHHTTCCEEEEECSB
T ss_pred CCCEEEEEechHHHHHHHHHHHHHhcCCCeEEEecCc
Confidence 4789999999999999999999999997 44444444
No 72
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=21.25 E-value=91 Score=21.02 Aligned_cols=29 Identities=14% Similarity=-0.105 Sum_probs=25.2
Q ss_pred cEEEecccchhhHHHHHHHHhhhCCeEEE
Q 046541 12 DIELTALGMAIPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 12 eVeLsALG~AI~tvVtvAEiLK~nglAt~ 40 (94)
-|-|||+|......-.+++.|.++|+.++
T Consensus 63 vv~~HG~~~~~~~~~~~~~~l~~~g~~vi 91 (342)
T 3hju_A 63 IFVSHGAGEHSGRYEELARMLMGLDLLVF 91 (342)
T ss_dssp EEEECCTTCCGGGGHHHHHHHHTTTEEEE
T ss_pred EEEECCCCcccchHHHHHHHHHhCCCeEE
Confidence 46689999999999999999999998764
No 73
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=21.03 E-value=88 Score=26.62 Aligned_cols=34 Identities=21% Similarity=0.294 Sum_probs=28.5
Q ss_pred cEEEecccchhhHHHHHHHHhhhCCe-EEEEEEee
Q 046541 12 DIELTALGMAIPTVVTIAEALKRDGL-ASNIEVKI 45 (94)
Q Consensus 12 eVeLsALG~AI~tvVtvAEiLK~ngl-At~kkI~T 45 (94)
+|-|-|.|.-+..++.+||.|+.+|+ +.+-..+|
T Consensus 586 dvtiia~G~~v~~al~Aa~~L~~~Gi~~~VVd~~~ 620 (700)
T 3rim_A 586 DVILIATGSEVQLAVAAQTLLADNDILARVVSMPC 620 (700)
T ss_dssp SEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECSC
T ss_pred CEEEEEechHHHHHHHHHHHHHhcCCCeEEEEecc
Confidence 89999999999999999999999996 34444443
No 74
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=20.93 E-value=78 Score=21.72 Aligned_cols=29 Identities=21% Similarity=0.156 Sum_probs=23.4
Q ss_pred cEEEecccchhhHHH----------------HHHHHhhhCCeEEE
Q 046541 12 DIELTALGMAIPTVV----------------TIAEALKRDGLASN 40 (94)
Q Consensus 12 eVeLsALG~AI~tvV----------------tvAEiLK~nglAt~ 40 (94)
-|-|||+|....... .+++.|.++|+.++
T Consensus 53 vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~ 97 (354)
T 2rau_A 53 VLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVY 97 (354)
T ss_dssp EEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEE
T ss_pred EEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEE
Confidence 467899998877666 78899999998764
No 75
>2vd3_A ATP phosphoribosyltransferase; metal-binding, glycosyltransferase, HISG, histidine, magnesi transferase; HET: HIS; 2.45A {Methanobacterium thermoautotrophicum}
Probab=20.84 E-value=19 Score=27.90 Aligned_cols=48 Identities=17% Similarity=0.235 Sum_probs=36.7
Q ss_pred hHhhhhhcC-cEEE------------ecccchhhHHHHHHHHhhhCCeEEEEEEeeeeeee
Q 046541 3 LQRYIKQYN-DIEL------------TALGMAIPTVVTIAEALKRDGLASNIEVKISTVNS 50 (94)
Q Consensus 3 ~Kr~l~~~~-eVeL------------sALG~AI~tvVtvAEiLK~nglAt~kkI~Tstv~~ 50 (94)
+++|+++++ +|++ -||--||.++|+--..|+.|||..+..|..|+..+
T Consensus 126 ~~~yf~~~gi~~~ii~l~GsvE~ap~~GlADaIvDivsTG~TLraNgL~~ie~I~~ssA~L 186 (289)
T 2vd3_A 126 TENYLREHGIDAEVVELTGSTEIAPFIGVADLITDLSSTGTTLRMNHLRVIDTILESSVKL 186 (289)
T ss_dssp HHHHHHHTTCCCEEEECSSCGGGTTTTTSCSEEEEEESSTHHHHHTTEEEEEEEEEECEEE
T ss_pred HHHHHHHcCCcEEEEECCCceeeccCCCcccEEEEEeCChHHHHHCCCEEeEEEEeeEEEE
Confidence 578887654 2332 24666788899999999999999999999887753
No 76
>3c4i_A DNA-binding protein HU homolog; dimerization by four helix bundle interaction, DNA condensat binding; 2.04A {Mycobacterium tuberculosis}
Probab=20.77 E-value=41 Score=21.20 Aligned_cols=17 Identities=18% Similarity=0.470 Sum_probs=13.4
Q ss_pred HhhhhhcCcEEEecccc
Q 046541 4 QRYIKQYNDIELTALGM 20 (94)
Q Consensus 4 Kr~l~~~~eVeLsALG~ 20 (94)
...|.+.+.|+|.|+|.
T Consensus 33 ~~~L~~g~~V~l~gfG~ 49 (99)
T 3c4i_A 33 VRAVHKGDSVTITGFGV 49 (99)
T ss_dssp HHHHHTTCCEEETTTEE
T ss_pred HHHHhCCCEEEECCCEE
Confidence 35678888899998885
No 77
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=20.67 E-value=81 Score=26.30 Aligned_cols=28 Identities=29% Similarity=0.354 Sum_probs=26.1
Q ss_pred CcEEEecccchhhHHHHHHHHhhhCCeE
Q 046541 11 NDIELTALGMAIPTVVTIAEALKRDGLA 38 (94)
Q Consensus 11 ~eVeLsALG~AI~tvVtvAEiLK~nglA 38 (94)
++|-|=|.|.-...++.+||.|+.+|+-
T Consensus 555 ~dvtiva~G~~v~~al~Aa~~L~~~Gi~ 582 (680)
T 1gpu_A 555 PDIILVATGSEVSLSVEAAKTLAAKNIK 582 (680)
T ss_dssp CSEEEEECTHHHHHHHHHHHHHHTTTCC
T ss_pred CCEEEEEEcHHHHHHHHHHHHHHhcCCC
Confidence 6999999999999999999999999864
No 78
>2np2_A HBB; protein-DNA complex, DNA-binding protein, DNA-bending protein, dnabii family, HU/IHF family, DNA binding protein/DNA complex; 3.02A {Borrelia burgdorferi}
Probab=20.41 E-value=41 Score=21.56 Aligned_cols=17 Identities=24% Similarity=0.356 Sum_probs=13.2
Q ss_pred HhhhhhcCcEEEecccc
Q 046541 4 QRYIKQYNDIELTALGM 20 (94)
Q Consensus 4 Kr~l~~~~eVeLsALG~ 20 (94)
...|...+.|+|.|+|.
T Consensus 46 ~~~L~~G~~V~l~gfGt 62 (108)
T 2np2_A 46 KSNLCSNNVIEFRSFGT 62 (108)
T ss_dssp HHHHHTTCEEEETTTEE
T ss_pred HHHHHCCCeEEecCcEE
Confidence 35677888899988885
No 79
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=20.37 E-value=85 Score=26.57 Aligned_cols=34 Identities=32% Similarity=0.412 Sum_probs=28.3
Q ss_pred cEEEecccchhhHHHHHHHHhhhCCe-EEEEEEee
Q 046541 12 DIELTALGMAIPTVVTIAEALKRDGL-ASNIEVKI 45 (94)
Q Consensus 12 eVeLsALG~AI~tvVtvAEiLK~ngl-At~kkI~T 45 (94)
+|-|=|.|.-+..++.+||.|+.+|. +.+-..+|
T Consensus 578 dvtiia~G~~v~~Al~Aa~~L~~~GI~~~Vid~~~ 612 (690)
T 3m49_A 578 DVILLATGSEVSLAVEAQKALAVDGVDASVVSMPS 612 (690)
T ss_dssp SEEEEECTTHHHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CEEEEEechHHHHHHHHHHHHHhcCCCeEEEeccc
Confidence 89999999999999999999999996 33444443
No 80
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=20.27 E-value=93 Score=20.28 Aligned_cols=30 Identities=3% Similarity=-0.181 Sum_probs=24.9
Q ss_pred CcEEEecccchhhHHHHHHHHhhhCCeEEE
Q 046541 11 NDIELTALGMAIPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 11 ~eVeLsALG~AI~tvVtvAEiLK~nglAt~ 40 (94)
+-|-|||+|.....--.+++-|.++|+-++
T Consensus 23 ~vvllHG~~~~~~~w~~~~~~l~~~g~~vi 52 (275)
T 1a88_A 23 PVVFHHGWPLSADDWDNQMLFFLSHGYRVI 52 (275)
T ss_dssp EEEEECCTTCCGGGGHHHHHHHHHTTCEEE
T ss_pred eEEEECCCCCchhhHHHHHHHHHHCCceEE
Confidence 357899999888888889999999998654
No 81
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=20.10 E-value=68 Score=23.20 Aligned_cols=29 Identities=17% Similarity=0.102 Sum_probs=25.0
Q ss_pred cEEEecccchhhHHHHHHHHhhhCCeEEE
Q 046541 12 DIELTALGMAIPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 12 eVeLsALG~AI~tvVtvAEiLK~nglAt~ 40 (94)
-|-+||+|..-...-.+++-|-++|++++
T Consensus 101 Vv~~HG~~~~~~~~~~~a~~La~~Gy~V~ 129 (383)
T 3d59_A 101 VVFSHGLGAFRTLYSAIGIDLASHGFIVA 129 (383)
T ss_dssp EEEECCTTCCTTTTHHHHHHHHHTTCEEE
T ss_pred EEEcCCCCCCchHHHHHHHHHHhCceEEE
Confidence 46789999887788899999999999876
No 82
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=20.07 E-value=85 Score=26.71 Aligned_cols=35 Identities=23% Similarity=0.344 Sum_probs=28.7
Q ss_pred CcEEEecccchhhHHHHHHHHhhhCCeE-EEEEEee
Q 046541 11 NDIELTALGMAIPTVVTIAEALKRDGLA-SNIEVKI 45 (94)
Q Consensus 11 ~eVeLsALG~AI~tvVtvAEiLK~nglA-t~kkI~T 45 (94)
++|-|=|.|.-+..++.+||.|+.+|.- .+-..+|
T Consensus 598 ~dvtiia~G~~v~~al~Aa~~L~~~GI~~~Vid~~s 633 (711)
T 3uk1_A 598 RKIILIATGSEVELAMKAVEPLAQQGIAARVVSMPS 633 (711)
T ss_dssp EEEEEEECTTHHHHHHHHHHHHHHTTEEEEEEECSC
T ss_pred CCEEEEEecHHHHHHHHHHHHHHHcCCCeEEEecCc
Confidence 5899999999999999999999999973 3334333
No 83
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=20.01 E-value=57 Score=21.57 Aligned_cols=29 Identities=7% Similarity=0.058 Sum_probs=24.2
Q ss_pred cEEEecccchhhHHHHHHHHhhhCCeEEE
Q 046541 12 DIELTALGMAIPTVVTIAEALKRDGLASN 40 (94)
Q Consensus 12 eVeLsALG~AI~tvVtvAEiLK~nglAt~ 40 (94)
-|-+||.|.-....-.+++.|.++|+.++
T Consensus 57 vv~~HG~~~~~~~~~~~~~~l~~~G~~v~ 85 (262)
T 1jfr_A 57 VVISPGFTAYQSSIAWLGPRLASQGFVVF 85 (262)
T ss_dssp EEEECCTTCCGGGTTTHHHHHHTTTCEEE
T ss_pred EEEeCCcCCCchhHHHHHHHHHhCCCEEE
Confidence 36789999888877789999999998765
Done!